Nitrobacter hamburgensis X14 plasmid 3, complete sequence.
type: Entry
definition: Nitrobacter hamburgensis X14 plasmid 3, complete sequence.
sequence version: NC_007961.1
sequence date: 2023-05-27
sequence: sequence
division: CON
label: NC_007961.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02598307
keyword: RefSeq
source: Nitrobacter hamburgensis X14
organism: Nitrobacter hamburgensis X14
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Nitrobacteraceae; Nitrobacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP000322.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 3634489\nSource DNA and bacteria available from Dan Arp (arpd@bcc.orst.edu)\nContacts: Dan Arp (arpd@bcc.orst.edu)\n Paul Richardson (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LLNL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/27/2023 01:34:17\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,899\nCDSs (total) :: 4,840\nGenes (coding) :: 4,488\nCDSs (with protein) :: 4,488\nGenes (RNA) :: 59\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 4\nPseudo Genes (total) :: 352\nCDSs (without protein) :: 352\nPseudo Genes (ambiguous residues) :: 0 of 352\nPseudo Genes (frameshifted) :: 168 of 352\nPseudo Genes (incomplete) :: 274 of 352\nPseudo Genes (inte…

sequence
subclass of: SO_0000155
sequence length: 121408
topology: circular
so has quality: SO_0000988
location: 1..121408
location: region:1-121408:1
RO_0002162: 323097

NC_007961
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02598307
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of Plasmid3 of Nitrobacter hamburgensis X14
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Detter, J.C.
author: Glavina del Rio, T.
author: Hammon, N.
author: Israni, S.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Chain, P.
author: Malfatti, S.
author: Shin, M.
author: Vergez, L.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Ivanova, N.
author: Ward, B.
author: Arp, D.
author: Klotz, M.
author: Stein, L.
author: O'Mullan, G.
author: Starkenburg, S.
author: Sayavedra, L.
author: Poret-Peterson, A.T.
author: Gentry, M.E.
author: Bruce, D.
author: Richardson, P.
journal: Unpublished

2
title: Direct Submission
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Detter, J.C.
author: Glavina del Rio, T.
author: Hammon, N.
author: Israni, S.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Chain, P.
author: Malfatti, S.
author: Shin, M.
author: Vergez, L.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Kyrpides, N.
author: Ivanova, N.
author: Ward, B.
author: Arp, D.
author: Klotz, M.
author: Stein, L.
author: O'Mullan, G.
author: Starkenburg, S.
author: Sayavedra, L.
author: Poret-Peterson, A.T.
author: Gentry, M.E.
author: Richardson, P.
journal: Submitted (28-MAR-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121408:1
position: 121408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-121408:1:source
so part of: sequence
organism: Nitrobacter hamburgensis X14
mol type: genomic DNA
strain: X14
type material: type strain of Nitrobacter hamburgensis
plasmid: 3

323097
type: Taxonomy
SIO_000068: taxonomy

NHAM_RS23140
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: traA
locus tag: NHAM_RS23140
old locus tag: Nham_4540
so part of: sequence
location: 122..3445
location: region:122-3445:1
so has part: feature:122-3445:1:exon
subclass of: SO_0000010

position:122:1
position: 122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3445:1
position: 3445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122-3445:1:exon

NHAM_RS23140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: traA
locus tag: NHAM_RS23140
old locus tag: Nham_4540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020048127.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
translation: MAITHFTVQIVSRGTGGSAVLSAAYRHCARMDYEAEARVVDYSNKRNLAHEDFVLPPDAPAWVRAMIADRSVSGASETFWNYVEAFETRSDAQFAREAIIALPVELTREQNIALMRAFVTQEILPRGQVADWVYHNEPGNPHVHLMTTLRPLIESGFGGKKVAVTGEDGKPLRTQAGKIRYALWAGDTPDFLAQRARWIDLQNQHLALAGLDVRVEGRSYAERGIAIVPTTHIGVATKAIDRRKAKRQGGTQRLDRLAVFEENRAENARRIQRRPEIVLELVSREKSVFDERDIAKVLHRYVDDSGTFQNLLTRILQLPEVIRLQAESIDFATGGRAPARYTVRELIRCEAEMARRAIHLSGSTTFPVKASVIAGVSARHANLSAEQRTAIEHLSSGERIAAVVGRAGAGKTTMMRAAREMWEEAGYRVVGGALAGKAAEGLEKEAGIAARTLASWELGWKNGRDDLDDKTVFVLDEAGMVASRQMALVVETASKAGAKIVLVGDPEQLQPIEAGAAFRSIVERIGYAELETIYRQREQWMRDASLDLARGRTAQALSAYRQHGRVLGSELKAQAIDSLIADWNRDYDPSKSTLILAHLRRDVRALNDMARAKLVERGLVEEGHVFGTEDGERRFAVGDQIVFLKNEGSLGVKNGMIGKVVDAAPGRLVAEIGDGQGSVENRRRVAVEQRFYRNVDHGYATTVHKAQGATVDRVKVLATLSLDKHLTYVALTRHREEVTLYYGRRSFQFAGGLIPILSQRRAKETTLDYERGALYRDALRFAANRGLHIVRVARTLINDRRRWTLRQKQRLVDAGRRLRALGERLGLVDSHKPVISTARKEAKPMVAGVTTFLKSFTDTIEDRILADPAIKKQWKEVSTRFRLVFADPERAFRAVNFDAMLKDSAAAVSTIQQLAANPESFGALRGKTGLLAGKADKQERQRAEANVPALKSDIERYLRLRAEAEHKHEAEERAIRHSVAIDIPALSRDAHRVLERVRDAIDRNDLPSALEFALADRMVKAEIDGFNKAIAERFGDRTFLPNAAREAKGQAFEKAAAGMDPARREQLKEAWPAMRTAQRLAAGERTAQALKQVESQRMMQRQGQTLK
SIO_010081: NHAM_RS23140
subclass of: SO_0000673
so part of: NHAM_RS23140
location: 122..3445
location: region:122-3445:1
so has part: feature:122-3445:1:exon

WP_011505201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122-3445:1:exon

NHAM_RS23145
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: traF
locus tag: NHAM_RS23145
old locus tag: Nham_4541
so part of: sequence
location: 3442..3975
location: region:3442-3975:1
so has part: feature:3442-3975:1:exon
subclass of: SO_0000010

position:3442:1
position: 3442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3975:1
position: 3975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3442-3975:1:exon

NHAM_RS23145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: traF
locus tag: NHAM_RS23145
old locus tag: Nham_4541
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003508820.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0008233 - peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transfer signal peptidase TraF
translation: MRRQRSLLVVIATGAGAVLCLALTGWCADLRINMTPSYPRGLWRIEALDRPADVGDRIFICPPDTAVFERAFKRGYIRRGLCAGGLSPLIKTVAAIGGQQIDVAARVSIDGRVLGHSNVRRMDAAGRPLLPFAGGVIPAGALFLHSDFAGSYDSRYFGPIPASGILGLARPVLTFDR
SIO_010081: NHAM_RS23145
subclass of: SO_0000673
so part of: NHAM_RS23145
location: 3442..3975
location: region:3442-3975:1
so has part: feature:3442-3975:1:exon

WP_011505202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3442-3975:1:exon

NHAM_RS23150
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23150
old locus tag: Nham_4542
so part of: sequence
location: 3995..5131
location: region:3995-5131:1
so has part: feature:3995-5131:1:exon
subclass of: SO_0000010

position:3995:1
position: 3995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5131:1
position: 5131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3995-5131:1:exon

NHAM_RS23150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23150
old locus tag: Nham_4542
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501346.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraB
translation: MVAAAIAVGAVGWSGHVLALPLACAFPTLWAFAPSRSASAAVSAGYFLAASRGLPQGVVNFYGSDFSVGIALWIGAAAAFVLVHTVLWQRQPGWRGAVSFGIATVLMSLPPFGIVGWAEPIAAAGVLFPGWGWWGLAATAAVLPTMTTGKWPIAAIVATGFWAWSAAHWIAPSPPQGWTGLDTRLGSALGRPPDLEQTRALFERVSEARGAGARVVVLPESAAGLWTPTTSAFWIDSLRGADVTVIAGAAIVEPDGYDNVMVEAGDGRARVLYGERMPVPVSMWQPWLAWTGQGGGARASFFGNPVVEVAGRRVAPLICYEELLVWPVLQSMWYAPDVVVAIGNDWWTAGSSILAIQRASCEAWARLFALPLVLAFNT
SIO_010081: NHAM_RS23150
subclass of: SO_0000673
so part of: NHAM_RS23150
location: 3995..5131
location: region:3995-5131:1
so has part: feature:3995-5131:1:exon

WP_011505203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3995-5131:1:exon

NHAM_RS23155
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23155
old locus tag: Nham_4543
so part of: sequence
location: 5143..5766
location: region:5143-5766:1
so has part: feature:5143-5766:1:exon
subclass of: SO_0000010

position:5143:1
position: 5143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5766:1
position: 5766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5143-5766:1:exon

NHAM_RS23155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23155
old locus tag: Nham_4543
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011504836.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraH family protein
translation: MVDAAGIHHCADPVLKPAIVEKFIRAVGSPDPLTVTIRAGNRVVLVSPPKTPDQAMALVRRYVGHAMVRVGVTQYPAGLGVSDVSELKPDLVDACANIRMGTTLFGKVYRIVVKWYGTPADQAFGDAIEAWKTGYFDGKYVFDEPDPGSLPPRKGAPGDSDQPVKTDDAPKPATSADSGAQPAKEPDDPNKAGIRIDLTGIGVGKPK
SIO_010081: NHAM_RS23155
subclass of: SO_0000673
so part of: NHAM_RS23155
location: 5143..5766
location: region:5143-5766:1
so has part: feature:5143-5766:1:exon

WP_011505204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5143-5766:1:exon

NHAM_RS23160
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23160
old locus tag: Nham_4544
so part of: sequence
location: complement(5851..6105)
location: region:5851-6105:-1
so has part: feature:5851-6105:-1:exon
subclass of: SO_0000010

position:5851:-1
position: 5851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6105:-1
position: 6105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5851-6105:-1:exon

NHAM_RS23160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23160
old locus tag: Nham_4544
inference: COORDINATES: protein motif:HMM:NF013970.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MELDIPVDAWIDRFLDRPGLEGVPLAHRAAARSYQLHHFEHRDPADRLLIATAIDLRCPLVTYDERITQFGKKRGRQQEFSIEI
SIO_010081: NHAM_RS23160
subclass of: SO_0000673
so part of: NHAM_RS23160
location: complement(5851..6105)
location: region:5851-6105:-1
so has part: feature:5851-6105:-1:exon

WP_245270151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5851-6105:-1:exon

NHAM_RS23165
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23165
old locus tag: Nham_4545
pseudo: true
so part of: sequence
location: complement(6219..>6476)
location: region:6219-6476:-1
so has part: feature:6219-6476:-1:exon
subclass of: SO_0000010

position:6219:-1
position: 6219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6476:-1
position: 6476
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6219-6476:-1:exon

NHAM_RS23165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23165
old locus tag: Nham_4545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012640573.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - DNA transposition [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: NHAM_RS23165
subclass of: SO_0000673
so part of: NHAM_RS23165
location: complement(6219..>6476)
location: region:6219-6476:-1
so has part: feature:6219-6476:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6219-6476:-1:exon

NHAM_RS23170
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23170
old locus tag: Nham_4546
so part of: sequence
location: 7284..8003
location: region:7284-8003:1
so has part: feature:7284-8003:1:exon
subclass of: SO_0000010

position:7284:1
position: 7284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8003:1
position: 8003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7284-8003:1:exon

NHAM_RS23170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23170
old locus tag: Nham_4546
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011505255.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVSAAVVLREDNAIERPAALLSRAEVLTRYRHLREISRQHHSAVLDFLSKDTIISQARRLGLAQGKTLLLDSMDDLNFVFDLAIHTAKDRSRAIDRYARAVRLAPGFDETLMLEAMRRARFAIISIVRRHPVAGLIVKDLFRGVEVWLVDEGLESSLPAGAALATRLFTPEGFAMTAGVLVPLDIELIEDAIADTPQLLRNRREELIDDRRFAEAIYRVALASGLMEQVAYQDTIAEAG
SIO_010081: NHAM_RS23170
subclass of: SO_0000673
so part of: NHAM_RS23170
location: 7284..8003
location: region:7284-8003:1
so has part: feature:7284-8003:1:exon

WP_011505205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7284-8003:1:exon

NHAM_RS24330
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS24330
old locus tag: Nham_4548
so part of: sequence
location: 8473..8919
location: region:8473-8919:1
so has part: feature:8473-8919:1:exon
subclass of: SO_0000010

position:8473:1
position: 8473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8919:1
position: 8919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8473-8919:1:exon

NHAM_RS24330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS24330
old locus tag: Nham_4548
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011505257.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFQITILKVLAGHPDGRASVAELTRYVSILMSSGSDWTDAGWPHAHQSIEIFADSFVLRDERGWCITDSGRQFLASLEAPTPAWSEKQDQPPGARVTFVTAPSQVQPTLRLIVDNTGAQPGLDPDETRRSAWSALRPRSTMGGEGRS
SIO_010081: NHAM_RS24330
subclass of: SO_0000673
so part of: NHAM_RS24330
location: 8473..8919
location: region:8473-8919:1
so has part: feature:8473-8919:1:exon

WP_011505206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8473-8919:1:exon

NHAM_RS24335
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS24335
old locus tag: Nham_4549
so part of: sequence
location: complement(8944..9219)
location: region:8944-9219:-1
so has part: feature:8944-9219:-1:exon
subclass of: SO_0000010

position:8944:-1
position: 8944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9219:-1
position: 9219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8944-9219:-1:exon

NHAM_RS24335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS24335
old locus tag: Nham_4549
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVAEKRSVLASWASDACSIESNPALRAAATGSVVSYDDIIDALQSLDAGQSADTVTYAFKRRQRRRRWSDWKGRRRGGPDNGDVGSSAFG
SIO_010081: NHAM_RS24335
subclass of: SO_0000673
so part of: NHAM_RS24335
location: complement(8944..9219)
location: region:8944-9219:-1
so has part: feature:8944-9219:-1:exon

WP_157043860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8944-9219:-1:exon

NHAM_RS23190
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23190
old locus tag: Nham_4550
so part of: sequence
location: complement(9433..9933)
location: region:9433-9933:-1
so has part: feature:9433-9933:-1:exon
subclass of: SO_0000010

position:9433:-1
position: 9433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9933:-1
position: 9933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9433-9933:-1:exon

NHAM_RS23190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23190
old locus tag: Nham_4550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011087990.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20/alpha crystallin family protein
translation: MGIKDLIPWNNGGREVTIHRGADVNPFFTLHREMNRIFDDVFRGFDLAPFGSPPRLSGLGWPQIDIDETDKEVRITAELPGLDEKDVSLEIANGVLSISGEKKSESEDKARRFSERYYGRFERRIQLQDIEEDKASAAFKNGVLTVTVPKSVEAKNVRRIAINRND
SIO_010081: NHAM_RS23190
subclass of: SO_0000673
so part of: NHAM_RS23190
location: complement(9433..9933)
location: region:9433-9933:-1
so has part: feature:9433-9933:-1:exon

WP_011504831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9433-9933:-1:exon

NHAM_RS23195
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23195
old locus tag: Nham_4551
so part of: sequence
location: complement(10019..10480)
location: region:10019-10480:-1
so has part: feature:10019-10480:-1:exon
subclass of: SO_0000010

position:10019:-1
position: 10019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10480:-1
position: 10480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10019-10480:-1:exon

NHAM_RS23195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23195
old locus tag: Nham_4551
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007613480.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20 family protein
translation: MRTTYDFAPLWRSTIGFDRLFDLVDAAQQAGAEDNYPPCNVERLGEDRYQISLAVAGFSADEIAITAEQSVLTVEGRKSEKYQREFLYQGISSRPFKRQFNLADYVQVKGAAFDNGLLQIELVREVPEAMKPRRISIDGSSAPNVRQIDDKAA
SIO_010081: NHAM_RS23195
subclass of: SO_0000673
so part of: NHAM_RS23195
location: complement(10019..10480)
location: region:10019-10480:-1
so has part: feature:10019-10480:-1:exon

WP_011504830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10019-10480:-1:exon

NHAM_RS27825
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS27825
old locus tag: Nham_4553
so part of: sequence
location: complement(10902..11330)
location: region:10902-11330:-1
so has part: feature:10902-11330:-1:exon
subclass of: SO_0000010

position:10902:-1
position: 10902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11330:-1
position: 11330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10902-11330:-1:exon

NHAM_RS27825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS27825
old locus tag: Nham_4553
inference: COORDINATES: protein motif:HMM:NF013970.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MTEALLLDTHIALWLDSGNDRLHHSTRALIDNCWRNGGTIFLSSVTAWEIALLVDTGRIELDIPVDAWIDRFLDRPGLEGVPLAHRAAARSYQLHHLEHRDPADRLLIATAIDLRCPLVTYDERITQFGKKRGRQQEFSIEI
SIO_010081: NHAM_RS27825
subclass of: SO_0000673
so part of: NHAM_RS27825
location: complement(10902..11330)
location: region:10902-11330:-1
so has part: feature:10902-11330:-1:exon

WP_011504829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10902-11330:-1:exon

NHAM_RS27830
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS27830
so part of: sequence
location: complement(11327..11581)
location: region:11327-11581:-1
so has part: feature:11327-11581:-1:exon
subclass of: SO_0000010

position:11327:-1
position: 11327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11581:-1
position: 11581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11327-11581:-1:exon

NHAM_RS27830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS27830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATVITINRPDVVALVEEAAEKMTGGNKTEAVALAMRRLLEQGARAGTLFGAHKKSVRIAEGVDLTAPILDVVPDAETGREVER
SIO_010081: NHAM_RS27830
subclass of: SO_0000673
so part of: NHAM_RS27830
location: complement(11327..11581)
location: region:11327-11581:-1
so has part: feature:11327-11581:-1:exon

WP_011504828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11327-11581:-1:exon

NHAM_RS23215
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23215
old locus tag: Nham_4554
so part of: sequence
location: 11777..11944
location: region:11777-11944:1
so has part: feature:11777-11944:1:exon
subclass of: SO_0000010

position:11777:1
position: 11777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11944:1
position: 11944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11777-11944:1:exon

NHAM_RS23215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23215
old locus tag: Nham_4554
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADRFWAGHRIYLAFDGTKLIILLGGGTKSRQQADFAQVIERRADYKRSKKAAKK
SIO_010081: NHAM_RS23215
subclass of: SO_0000673
so part of: NHAM_RS23215
location: 11777..11944
location: region:11777-11944:1
so has part: feature:11777-11944:1:exon

WP_157043862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11777-11944:1:exon

NHAM_RS23220
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23220
old locus tag: Nham_4555
pseudo: true
so part of: sequence
location: 11949..>12227
location: region:11949-12227:1
so has part: feature:11949-12227:1:exon
subclass of: SO_0000010

position:11949:1
position: 11949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12227:1
position: 12227
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11949-12227:1:exon

NHAM_RS23220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23220
old locus tag: Nham_4555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003606573.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transcriptional regulator
SIO_010081: NHAM_RS23220
subclass of: SO_0000673
so part of: NHAM_RS23220
location: 11949..>12227
location: region:11949-12227:1
so has part: feature:11949-12227:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11949-12227:1:exon

NHAM_RS23225
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23225
old locus tag: Nham_4556
so part of: sequence
location: complement(13055..14200)
location: region:13055-14200:-1
so has part: feature:13055-14200:-1:exon
subclass of: SO_0000010

position:13055:-1
position: 13055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14200:-1
position: 14200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13055-14200:-1:exon

NHAM_RS23225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23225
old locus tag: Nham_4556
inference: COORDINATES: protein motif:HMM:NF033542.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MHRSYDYFVGLDVSQRTTSVCIIDADGKKFCEGKCNSRPEDIRGWLVNRVAEDKTLKIGLEAGNMSSWLYSGLVKFGFDVVCMETFQAHRFLATYRNKTDKNDARGLAQLVRMGGEDFLRVVSIRSQASQETRVLLAMRDHLVSQKVGLENHIAGVLKPFGVIVERGNVTAETFYKRTLEGLAEAERNGVHVRPYVLPSLNLYMEAVEKIAPLTEKIHAIANSIEMVRRFMDIPGIGPITALSFYAAVDNPQRFQKSSDVAAYFGLTPRQFQSGETNFMGGISRRGDPATRRVLVIAATVLLSGTQQWNSLKAWGVRLAKRIGFSKARIAVARKLAMIMHKMWLNNDRFRPKNLSPQERIKLKQELIVVASKSGRVATAAV
SIO_010081: NHAM_RS23225
subclass of: SO_0000673
so part of: NHAM_RS23225
location: complement(13055..14200)
location: region:13055-14200:-1
so has part: feature:13055-14200:-1:exon

WP_011505211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13055-14200:-1:exon

NHAM_RS28730
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS28730
so part of: sequence
location: complement(14494..14670)
location: region:14494-14670:-1
so has part: feature:14494-14670:-1:exon
subclass of: SO_0000010

position:14494:-1
position: 14494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14670:-1
position: 14670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14494-14670:-1:exon

NHAM_RS28730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS28730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFGFCVLVDSLVLRPALRATACVSPCRNQLQSSRFRERDAGAVFANGVDGKALKFRLS
SIO_010081: NHAM_RS28730
subclass of: SO_0000673
so part of: NHAM_RS28730
location: complement(14494..14670)
location: region:14494-14670:-1
so has part: feature:14494-14670:-1:exon

WP_245270143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14494-14670:-1:exon

NHAM_RS23230
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23230
old locus tag: Nham_4558
so part of: sequence
location: complement(14844..15548)
location: region:14844-15548:-1
so has part: feature:14844-15548:-1:exon
subclass of: SO_0000010

position:14844:-1
position: 14844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15548:-1
position: 15548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14844-15548:-1:exon

NHAM_RS23230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23230
old locus tag: Nham_4558
inference: COORDINATES: protein motif:HMM:NF015437.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autoinducer binding domain-containing protein
translation: MGGQLQGLIDAVDVAQDERSIHNAIKNFTVASGFDRYAYIHVHAGDGVGFTDYPVEWQNIYLEKRYTVIDPVVTTAKRTMKMFAWSAEDPTVWRGSREIKQFYSEATDFGIRSGVSVPIRTSYGRTAMITLASDRRQVELPPWDPMQAALALAYIHIHLSLASASSLKVGEVSLSAQEATSLSWSSHGKSMNVIADLLGIKPRTVQFYLDNARDKLGASNLQQAVRIAMEKKLI
SIO_010081: NHAM_RS23230
subclass of: SO_0000673
so part of: NHAM_RS23230
location: complement(14844..15548)
location: region:14844-15548:-1
so has part: feature:14844-15548:-1:exon

WP_011505213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14844-15548:-1:exon

NHAM_RS23235
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: trbI
locus tag: NHAM_RS23235
old locus tag: Nham_4559
so part of: sequence
location: complement(15988..17289)
location: region:15988-17289:-1
so has part: feature:15988-17289:-1:exon
subclass of: SO_0000010

position:15988:-1
position: 15988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17289:-1
position: 17289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15988-17289:-1:exon

NHAM_RS23235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: trbI
locus tag: NHAM_RS23235
old locus tag: Nham_4559
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523583.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IncP-type conjugal transfer protein TrbI
translation: MAQSLKLGGTPEGEEARGIRRLNQLPIIVAIVLVIVFFAVIFYGLTSRGLYVHRAAGIDTASSSPATTFADQLKKGISNGIIGDQSEAQAFQPAPQSEAPKPPSNPLAGRQQAEASASTLEREAVWRARLEREAHEQYLRERQRERMARVQANDAAYDSPLALNLGKLQTSTAPTSGGAPSKATSTPGFAGGANDLYAAALRAGFGTQNIDPNGQGAKEDFFNADLKKLGYLPNKVVAPTSAYELKRGSVIPATLITGINSDLPGRITAQVSQNVYDSATGHDLLIPQGTKLLGRYDSKISFGQSRVLVIWTDIIFPNGATLQIGGMAGTDSEGYGGFNDQVDNHYFKVFGSAILIAAIGAGIDMSVPASSPYGYRQTPTDAARNSFAETFGRVAEQTISKNLNVQPTLEIRPGYVFNVLVDQDMVFLGAYRG
SIO_010081: NHAM_RS23235
subclass of: SO_0000673
so part of: NHAM_RS23235
location: complement(15988..17289)
location: region:15988-17289:-1
so has part: feature:15988-17289:-1:exon

WP_011505214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15988-17289:-1:exon

NHAM_RS23240
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: trbH
locus tag: NHAM_RS23240
old locus tag: Nham_4560
so part of: sequence
location: complement(17300..17752)
location: region:17300-17752:-1
so has part: feature:17300-17752:-1:exon
subclass of: SO_0000010

position:17300:-1
position: 17300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17752:-1
position: 17752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17300-17752:-1:exon

NHAM_RS23240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: trbH
locus tag: NHAM_RS23240
old locus tag: Nham_4560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649093.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbH
translation: MRVDSLTRRAILLCIVALSLAGCASFGTGGLVASSAPPDLSGPAASAIAGDLVTKFAEQVGPGSGTIILKRDGSPFGQALETSLKSWGYAVATDQKTGGEKTIPLAYVIASYNGQILARLSTAHVELGRTYAATTAGASPASPLSVMRRG
SIO_010081: NHAM_RS23240
subclass of: SO_0000673
so part of: NHAM_RS23240
location: complement(17300..17752)
location: region:17300-17752:-1
so has part: feature:17300-17752:-1:exon

WP_011505215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17300-17752:-1:exon

NHAM_RS23245
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: trbG
locus tag: NHAM_RS23245
old locus tag: Nham_4561
so part of: sequence
location: complement(17755..18594)
location: region:17755-18594:-1
so has part: feature:17755-18594:-1:exon
subclass of: SO_0000010

position:17755:-1
position: 17755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18594:-1
position: 18594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17755-18594:-1:exon

NHAM_RS23245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: trbG
locus tag: NHAM_RS23245
old locus tag: Nham_4561
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013650736.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MHPYTIRLKTGLFIAAAAFGLLLADVSAHAQVMNAKERKGTHISSQWRGSTGLVTRGADGKVIFLFGEVQPSVVCSPLEVCDIELQAGEVVRDVLVGDTVRWKVEPATSGAVGGQAIHLIVKPSEPGLVTSMVVTTSRRTYHIQLKSNAIQYMARVGFEYPEDVSSKLANINARLGTETIPGAGVPAEQLNFAYSVSGSASWRPTRVYSDGLKTYIQFPSSLAGQDAPVLFVESGGKDRIVNYRLKGDMMVVDYQIDTAILVSGVSFWHQEKVTIRRGG
SIO_010081: NHAM_RS23245
subclass of: SO_0000673
so part of: NHAM_RS23245
location: complement(17755..18594)
location: region:17755-18594:-1
so has part: feature:17755-18594:-1:exon

WP_011505216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17755-18594:-1:exon

NHAM_RS23250
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23250
old locus tag: Nham_4562
so part of: sequence
location: complement(18612..19274)
location: region:18612-19274:-1
so has part: feature:18612-19274:-1:exon
subclass of: SO_0000010

position:18612:-1
position: 18612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19274:-1
position: 19274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18612-19274:-1:exon

NHAM_RS23250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23250
old locus tag: Nham_4562
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018482029.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbF
translation: MAARNPPDNPYLAARQEWNERYGSYVKAAATWRVVGIVAMLMAVIGFAYALFESTQVKLVPYIVEVDKLGTAVNAGFPQQIEYADPRVVRATLGSFVSNFRSVTPDAVVQKQYIDRTYALLRTSDPATQKINDWFRSNSPFEKARTTTVAIEVNNIVALSSQTYQIDWTEFERDRKGKQTGEHRFRGIATVTLTPPQDEQTIRLNPIGLYLRDFDWTAQL
SIO_010081: NHAM_RS23250
subclass of: SO_0000673
so part of: NHAM_RS23250
location: complement(18612..19274)
location: region:18612-19274:-1
so has part: feature:18612-19274:-1:exon

WP_011505217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18612-19274:-1:exon

NHAM_RS23255
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: trbL
locus tag: NHAM_RS23255
old locus tag: Nham_4563
so part of: sequence
location: complement(19317..20471)
location: region:19317-20471:-1
so has part: feature:19317-20471:-1:exon
subclass of: SO_0000010

position:19317:-1
position: 19317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20471:-1
position: 20471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19317-20471:-1:exon

NHAM_RS23255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: trbL
locus tag: NHAM_RS23255
old locus tag: Nham_4563
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013913815.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MRGIKPGLVLIIAIGIVIIAHPALAQQDGSVLTTVENSVATATKGWQSTVMQAAKSLFWMLAGIEVGLAAIWLAIQAASIDAWFAELVRRIMFIGFFAFVLDQGPTFAKAVVDSLYQIGAGGGSASPADVFNAGLKVASSMSQNAQFGLFQDNALAIASVFAMVIVVISFSLVAAIFVAVMVEMYVGLLAGMIMLGLGGSSFTKDFAIRYLVYAFSIGMKLMALVMIAKIGSDSLLSLADQTGAGKDAFVTTLAIAGISVVVFIISIYVPNIMQGVVQGVSVGSGMEVVRHGTQSASFAAGSAALAMGGARAGAAGYSAARADGASFGAAALKGMTEGIGTAGGALASAARDRAVGASFGSTTLGLANAKLDRQRAQKSATRKA
SIO_010081: NHAM_RS23255
subclass of: SO_0000673
so part of: NHAM_RS23255
location: complement(19317..20471)
location: region:19317-20471:-1
so has part: feature:19317-20471:-1:exon

WP_011505218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19317-20471:-1:exon

NHAM_RS27835
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: trbK
locus tag: NHAM_RS27835
old locus tag: Nham_4564
so part of: sequence
location: complement(20484..20669)
location: region:20484-20669:-1
so has part: feature:20484-20669:-1:exon
subclass of: SO_0000010

position:20484:-1
position: 20484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20669:-1
position: 20669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20484-20669:-1:exon

NHAM_RS27835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: trbK
locus tag: NHAM_RS27835
old locus tag: Nham_4564
inference: COORDINATES: protein motif:HMM:NF022361.2
GO process: GO:0009292 - horizontal gene transfer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: entry exclusion protein TrbK
translation: MKPSTIIIVIIAIGAGAAGAWWLLAPRAPAPTSDATSRAHDFFKAPKDYKTTGGQKMKPRW
SIO_010081: NHAM_RS27835
subclass of: SO_0000673
so part of: NHAM_RS27835
location: complement(20484..20669)
location: region:20484-20669:-1
so has part: feature:20484-20669:-1:exon

WP_011505219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20484-20669:-1:exon

NHAM_RS23265
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: trbJ
locus tag: NHAM_RS23265
old locus tag: Nham_4565
so part of: sequence
location: complement(20666..21463)
location: region:20666-21463:-1
so has part: feature:20666-21463:-1:exon
subclass of: SO_0000010

position:20666:-1
position: 20666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21463:-1
position: 21463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20666-21463:-1:exon

NHAM_RS23265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: trbJ
locus tag: NHAM_RS23265
old locus tag: Nham_4565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523577.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MPRRFSPIHRALIVAFIIGLPTSGPAFAGAAAGGATEFTQILNNGELVSLVGQSTTQINNQIQQISQLAQQIQNQLKIYQNMLQNTAQLPSHVWGQAEGDLKQLQSVVNQGQGIAFSMGNIDDVLKQRFQSYAQFKTSLPNGANFASTYQTWSSTNRDTIAGTLQAAGLTSQQFSTENATMAQLKTASESADGQMKALQVGHEIAAQEVAQMQKLRGLIAQQTTMMATWFQSSQAGKDLSQARREQFFNATAPVTSGGQTMEPRW
SIO_010081: NHAM_RS23265
subclass of: SO_0000673
so part of: NHAM_RS23265
location: complement(20666..21463)
location: region:20666-21463:-1
so has part: feature:20666-21463:-1:exon

WP_011505220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20666-21463:-1:exon

NHAM_RS23270
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23270
old locus tag: Nham_4566
so part of: sequence
location: complement(21435..23888)
location: region:21435-23888:-1
so has part: feature:21435-23888:-1:exon
subclass of: SO_0000010

position:21435:-1
position: 21435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23888:-1
position: 23888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21435-23888:-1:exon

NHAM_RS23270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23270
old locus tag: Nham_4566
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012654968.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbE
translation: MVALRSFRHPSPSFADLVPHAGLVANGIVLLKDGSLMAGWYFAGPDSESSTDAERNEVSRQINTILSRLGSGWMIQVEAVRVPTTDYPARQDCHFPDPVTRAIDDERRARFEAERGHFESRHAIILTWRPPERRRAGLARYIYSDVESRSASYADTAIETFQNAIREIEQYLASVLSIQRMETREVDERDGTRVARYDELFQFIRFCITGENHPVRLPDIPMYLDWLATAELQHGLSPMVENRFLGVVAIDGFPAESWPGILNSLDLMPLTYRWSSRFMFLDDQDARQKLERTRKKWQQKVRPFIDQLFQTQSRSIDQDAAAMVAETEDAIAEASSQLVAYGYYTPVIVLFDDNSTRLQEKTEAVRRLIQAEGFGARIETLNATEAFLGSLPGNWYANIREPLINTRNLADLIPLNAVWSGSPTAPCPFYPPNSPPLMQVASGSTPFRMNLHVDDVGHTLVFGPTGSGKSTLLALIAAQFRRYAGAQIFAFDKGRSMMPLTLAAGGDHYEIGGDDADGSAALAFCPLSDLSTDTDRAWASEWIETLVAVQGVTITPDHRNAISRQIGLMAEARGRSLSDFVSGVQMREIKDALHHYTVDGPMGQLLDAESDGLELGSFQTFEIEQLMNMGERNLVPVLTYLFRRIEKRLTGAPSLIILDEAWLMLGHPVFRDKIREWLKVLRKANCAVLLATQSISDAERSGIIDVLKESCPTKICLPNGAAREPGTRKFYERIGFNDRQIEIVATAVPKREYYVASPEGRRLFNMALGPVALSFVGASGKDDLKRILALKKDSTDWPVYWLKERGIGHAETLLADS
SIO_010081: NHAM_RS23270
subclass of: SO_0000673
so part of: NHAM_RS23270
location: complement(21435..23888)
location: region:21435-23888:-1
so has part: feature:21435-23888:-1:exon

WP_011505221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21435-23888:-1:exon

NHAM_RS23275
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23275
old locus tag: Nham_4567
so part of: sequence
location: complement(23898..24197)
location: region:23898-24197:-1
so has part: feature:23898-24197:-1:exon
subclass of: SO_0000010

position:23898:-1
position: 23898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24197:-1
position: 24197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23898-24197:-1:exon

NHAM_RS23275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23275
old locus tag: Nham_4567
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650639.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbD
translation: MAEAGAELRRNRIHRALSRPNLLFGADRELVLLTGLAAVILIFVVLTWYAAILGAAIWIVVVAALRMMAKADPMMRRVYARHISYRPNYRATSTPWRRY
SIO_010081: NHAM_RS23275
subclass of: SO_0000673
so part of: NHAM_RS23275
location: complement(23898..24197)
location: region:23898-24197:-1
so has part: feature:23898-24197:-1:exon

WP_011505222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23898-24197:-1:exon

NHAM_RS23280
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23280
old locus tag: Nham_4568
so part of: sequence
location: complement(24190..24546)
location: region:24190-24546:-1
so has part: feature:24190-24546:-1:exon
subclass of: SO_0000010

position:24190:-1
position: 24190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24546:-1
position: 24546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24190-24546:-1:exon

NHAM_RS23280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23280
old locus tag: Nham_4568
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008120555.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MMIIGVAGMVFALLLIEPAFASTTGGGNLPWESPLQQIQQSITGPVAGFIALAAVAVAGGMLIFGGELNDFARRLMYVVLVAGILLGATQIVALFGASGASIGNVAPIADRAGDFGHG
SIO_010081: NHAM_RS23280
subclass of: SO_0000673
so part of: NHAM_RS23280
location: complement(24190..24546)
location: region:24190-24546:-1
so has part: feature:24190-24546:-1:exon

WP_086008386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24190-24546:-1:exon

NHAM_RS23285
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: trbB
locus tag: NHAM_RS23285
old locus tag: Nham_4569
so part of: sequence
location: complement(24551..25519)
location: region:24551-25519:-1
so has part: feature:24551-25519:-1:exon
subclass of: SO_0000010

position:24551:-1
position: 24551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25519:-1
position: 25519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24551-25519:-1:exon

NHAM_RS23285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: trbB
locus tag: NHAM_RS23285
old locus tag: Nham_4569
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649102.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MAELRSHPRLVRKLHDALGDQICAALDDTSVVEVMLNPDGRLFIERLGQGMASAGTMAAATAEIIIGSVAHALRSEADDERPIISGELPIGGHRFEGLLPPVVGGPAFTIRKRASRLFDLDDYVTQGVMTADQVAVVRNAIVSRLNIVVSGGTGSGKTTLANAVIAAIVAHAPEQRLVILEDTAEIQCAAENAVSLHTSDTVDMARLLKSTMRLRPDRIIVGEVRDGAALTLLKAWNTGHPGGITTIHANSAHSALRRLEQLTAEASQQAMREVIGEAVDLIVSIERTDRGRQVRDVLHVESYSAGQYQTESCARKEQRHVA
SIO_010081: NHAM_RS23285
subclass of: SO_0000673
so part of: NHAM_RS23285
location: complement(24551..25519)
location: region:24551-25519:-1
so has part: feature:24551-25519:-1:exon

WP_041359818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24551-25519:-1:exon

NHAM_RS23290
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23290
old locus tag: Nham_4570
so part of: sequence
location: complement(25537..26160)
location: region:25537-26160:-1
so has part: feature:25537-26160:-1:exon
subclass of: SO_0000010

position:25537:-1
position: 25537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26160:-1
position: 26160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25537-26160:-1:exon

NHAM_RS23290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23290
old locus tag: Nham_4570
EC number: 2.3.1.184
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013913822.1
GO function: GO:0061579 - N-acyl homoserine lactone synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-homoserine-lactone synthase
translation: MRAIAIDANEDSGMRSLLDGMHQLRARVFPGWLGWQVRIEQGHERDEYDALGPTYILALTDHGDVAGCARLLPTIDPNMLSQTFPQLLASGRLRAKPTRIESSRFCVDSQREGRGGRCLHEAILTMFAGVIEWSMSNGYDEIVTATDVLFERILQRAGWPMTRLGGVELIGETMSVAGILPADRTSFEQVYPPGYCSDLRRLKRAAA
SIO_010081: NHAM_RS23290
subclass of: SO_0000673
so part of: NHAM_RS23290
location: complement(25537..26160)
location: region:25537-26160:-1
so has part: feature:25537-26160:-1:exon

WP_011505225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25537-26160:-1:exon

NHAM_RS23295
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: repA
locus tag: NHAM_RS23295
old locus tag: Nham_4571
so part of: sequence
location: 26576..27790
location: region:26576-27790:1
so has part: feature:26576-27790:1:exon
subclass of: SO_0000010

position:26576:1
position: 26576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27790:1
position: 27790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26576-27790:1:exon

NHAM_RS23295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: repA
locus tag: NHAM_RS23295
old locus tag: Nham_4571
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006205756.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepA
translation: MPAQALNSDPTEDPADKIIRHAGMLSEHLQARRQQMYPPDAQKSLRHFMTHEVSKLTSIPESTLKLMSNEGKGPLPARLENNHRAYTLAQINELRQLFAAQRPADALRFLPHRRADEHLQVLAVANFKGGSAKTTTSAHLAHFLALHGYRVLAIDLDPQASLSAMFGAQPEIDVRQNETIYAALRYDDERRPIVDIIRPTYFTGIDLIPGNIEVMEYEHETPRYLSRRQPGSESIFFERLRLALADVEDAYDVVILDTPPSLGFLTLGAIYAATGLLVTVHPAMLDVMSMSQFLLMMGDLISVIRDAGATMKQDFLRYVVTRHDPFDQSQVRVVTMLRHLFAEDVLTATAIASTAIETAGLAKRTLYELEPGNISAATAKRARESIDAVNEQILALVTHAWGRT
SIO_010081: NHAM_RS23295
subclass of: SO_0000673
so part of: NHAM_RS23295
location: 26576..27790
location: region:26576-27790:1
so has part: feature:26576-27790:1:exon

WP_011505226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26576-27790:1:exon

NHAM_RS23300
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: repB
locus tag: NHAM_RS23300
old locus tag: Nham_4572
so part of: sequence
location: 27787..28818
location: region:27787-28818:1
so has part: feature:27787-28818:1:exon
subclass of: SO_0000010

position:27787:1
position: 27787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28818:1
position: 28818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27787-28818:1:exon

NHAM_RS23300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: repB
locus tag: NHAM_RS23300
old locus tag: Nham_4572
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014989225.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepB
translation: MTSKSRSGRSILANFGSFSESETTSDPSPSSPARVDAPAQPPARVGAGVIGATQRSLAELREERDKLQALVDAAGGSELDPGSIDPSPFPDRLPDDSQVDFEALKKLIAEEGQKVPIQVRRHPKVSRRYQVVYGHRRWRAALDLGIKVKATVVALSDSELVVAQGIENAARQDLSWIERALFAWRMDQAGIKARDIRVALSIDDPELARLRAVCRAVPVDVIEAIGRAPKAGRPRWVAMAASIGEDPAALDRVRKTLSGDKVSILTSDDRFKLALAAVKAPSARSRSEIELRGPAGRVLGKATFAKGDIKLTVAEEHASGFGAFLEEELPGLVERFFAREGTE
SIO_010081: NHAM_RS23300
subclass of: SO_0000673
so part of: NHAM_RS23300
location: 27787..28818
location: region:27787-28818:1
so has part: feature:27787-28818:1:exon

WP_011505227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27787-28818:1:exon

NHAM_RS23305
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: repC
locus tag: NHAM_RS23305
old locus tag: Nham_4573
so part of: sequence
location: 29095..30420
location: region:29095-30420:1
so has part: feature:29095-30420:1:exon
subclass of: SO_0000010

position:29095:1
position: 29095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30420:1
position: 30420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29095-30420:1:exon

NHAM_RS23305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: repC
locus tag: NHAM_RS23305
old locus tag: Nham_4573
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011578657.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: MTEHLATTPFGRRPMTLGMISSQLAAKKEKSETVIVHKWHVFQHIKEARQVLGATDRALAILHALLSFHPETALQGDSELIVWPSNEQLMARANGMPPTTLRRHLAILVDCGLIIRRDSPNGKRFARKGRGGEIEQAYGFDLAPIVARAEEYKSLAEAVQAEKKAFRVAKERLTILRRDIVKMVEAGIDEGVPADWRRFQQTYQDIAVRIPRTAPRQILESIGGEMEKLWRDIRELLESFTKTQNMDANESHSGRHIQNSNPDSHSESEEGPPKKIEAGGKVAATDNLRSLPKRELPLGIVLDACPEMRWLMKDGEIRHWRDFLAAAELARPMLGISPSAWCEAREVLGEQQAAITLAAIYQKSDQISSAGGYLRSLTERAKDGKFSVWPMVMALLRAKLDASKPPATQSGRDSAEPQKTAQGGGLQPSDQLRTPLSRWQK
SIO_010081: NHAM_RS23305
subclass of: SO_0000673
so part of: NHAM_RS23305
location: 29095..30420
location: region:29095-30420:1
so has part: feature:29095-30420:1:exon

WP_011505228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29095-30420:1:exon

NHAM_RS23310
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23310
old locus tag: Nham_4574
so part of: sequence
location: 30502..30750
location: region:30502-30750:1
so has part: feature:30502-30750:1:exon
subclass of: SO_0000010

position:30502:1
position: 30502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30750:1
position: 30750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30502-30750:1:exon

NHAM_RS23310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23310
old locus tag: Nham_4574
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010023905.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapB family antitoxin
translation: MAEPQLSVRSAKARDLAHRLARRENRSIADVVERALEAYEERAAGREPPTAFYARLKASADADIDLEAVIREGRHPHTGPEL
SIO_010081: NHAM_RS23310
subclass of: SO_0000673
so part of: NHAM_RS23310
location: 30502..30750
location: region:30502-30750:1
so has part: feature:30502-30750:1:exon

WP_041359822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30502-30750:1:exon

NHAM_RS23315
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23315
old locus tag: Nham_4575
so part of: sequence
location: 30747..31160
location: region:30747-31160:1
so has part: feature:30747-31160:1:exon
subclass of: SO_0000010

position:30747:1
position: 30747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31160:1
position: 31160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30747-31160:1:exon

NHAM_RS23315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23315
old locus tag: Nham_4575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018444840.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MIFLDTNVISETLRKAPDDGVLAWLVRHDAELALPTVTIAEIAFGIQKIRPDQRAERLERGLLDWRRRFADRIFGLTEEAALAYGEIMGEATRRGQPISAPDGMIAAIARVNGGRLATRNRSDFASTGLELMSPWDF
SIO_010081: NHAM_RS23315
subclass of: SO_0000673
so part of: NHAM_RS23315
location: 30747..31160
location: region:30747-31160:1
so has part: feature:30747-31160:1:exon

WP_011505230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30747-31160:1:exon

NHAM_RS23320
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23320
old locus tag: Nham_4576
so part of: sequence
location: complement(31165..32238)
location: region:31165-32238:-1
so has part: feature:31165-32238:-1:exon
subclass of: SO_0000010

position:31165:-1
position: 31165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32238:-1
position: 32238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31165-32238:-1:exon

NHAM_RS23320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23320
old locus tag: Nham_4576
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018097622.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MNNLSPGSDSLLVPSQAVREPGDAPSPPLPAHLEQLADRARGYVEAASSANTRRAYASDWKHFSAWCRRQGLEVLPPSAQTVGLYITACASGTATADHQPNSVATIERRLSALTWTYAQRGTPLDRADRHIATVLAGIRNTHAAPPRQKEAVLPEDVIAMLETLDRGTLRGLRDRAMLLIGFAGALRRSEIVGLDVDRDDTEDGRGWVEILDKGMIVTLRGKTGWREVEIGRGSSDATCPVIALQTWLKLAKIGHGPLFRRVIGQGKDVGPDRLTDRQVARLVKCAALAAGVRGDLPEGEREEKFAGHSLRAGLASSAEVDERYVQKQLGHASAEMTRRYQRRRDRFRVNLTKAAGL
SIO_010081: NHAM_RS23320
subclass of: SO_0000673
so part of: NHAM_RS23320
location: complement(31165..32238)
location: region:31165-32238:-1
so has part: feature:31165-32238:-1:exon

WP_011505231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31165-32238:-1:exon

NHAM_RS23325
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23325
old locus tag: Nham_4577
so part of: sequence
location: complement(32241..32627)
location: region:32241-32627:-1
so has part: feature:32241-32627:-1:exon
subclass of: SO_0000010

position:32241:-1
position: 32241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32627:-1
position: 32627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32241-32627:-1:exon

NHAM_RS23325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23325
old locus tag: Nham_4577
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003533691.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MVIDTSPIVAIFFNEPDAARFRERIADDPVRLISAATVLEAAMVIEARLGEAGGTELDLWLHKADVEIVPVTAEHADQARRAWRRYGKGRHPAGLNFGDCFSYALAALSGEPLLYKGNDFSQTDIKAA
SIO_010081: NHAM_RS23325
subclass of: SO_0000673
so part of: NHAM_RS23325
location: complement(32241..32627)
location: region:32241-32627:-1
so has part: feature:32241-32627:-1:exon

WP_011505232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32241-32627:-1:exon

NHAM_RS23330
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23330
old locus tag: Nham_4578
so part of: sequence
location: complement(32627..32881)
location: region:32627-32881:-1
so has part: feature:32627-32881:-1:exon
subclass of: SO_0000010

position:32881:-1
position: 32881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32627-32881:-1:exon

NHAM_RS23330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23330
old locus tag: Nham_4578
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017270337.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapB family antitoxin
translation: MALSIKDPETEKLARALAQRTGETITVATRRAIEERLKRTESQARKAALLEDMEAMQRRLNALPILDPRSPDDIIGYDENGVPN
SIO_010081: NHAM_RS23330
subclass of: SO_0000673
so part of: NHAM_RS23330
location: complement(32627..32881)
location: region:32627-32881:-1
so has part: feature:32627-32881:-1:exon

WP_011505233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32627-32881:-1:exon

NHAM_RS23335
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23335
old locus tag: Nham_4579
so part of: sequence
location: 33183..34838
location: region:33183-34838:1
so has part: feature:33183-34838:1:exon
subclass of: SO_0000010

position:33183:1
position: 33183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34838:1
position: 34838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33183-34838:1:exon

NHAM_RS23335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23335
old locus tag: Nham_4579
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008873506.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mu transposase C-terminal domain-containing protein
translation: MVHGPDKNSVDESTWSEAVSREAVIRRLVSLDRPGRSDFLRACHELGVKRTRLYELIGAYREHPVASSLLPRPAGTRQGSRRLPDETEAVIAEALQDFYKTRQKPSINRLHKEIRRLCRVRGLRAPSWHAVRARIAALDPAELAMAREGPKAARDRFRPVPGQYEAGHAFAVVQIDHTLVDVIVVDRQHRRPLQRPWLTLAIDVASRMVAGFYLTLEAPSAVSVALAIQHLVQPKEPWLAGLGIDADWPTCGFPEAIHVDNAREFRSRALRRGAEEYGVELIHRPVATPHYGGHIERLIGTMMGAVHLLPGTTFSDIDERGDYDSAANAMMTLDELEQWMALEITRYHADRHGALGIPPLAAWHEALARRVRPVCQPHDLAGFMIDFLPSVDRQVRRDGIHLFGLRYWDDILSIWAGRLDRPLRVAYDPRDLSKIYVRAPDGTRWPIRFADLRRPPITLGEHRRARTALRERGLALVDEQLIFETIEAQRMLVDEATRRTKAARQLAEKRDRALGAATAHSSSAPAEPRQAEDDRPIDWSKVPIFPVEEWS
SIO_010081: NHAM_RS23335
subclass of: SO_0000673
so part of: NHAM_RS23335
location: 33183..34838
location: region:33183-34838:1
so has part: feature:33183-34838:1:exon

WP_011505234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33183-34838:1:exon

NHAM_RS23340
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23340
old locus tag: Nham_4580
so part of: sequence
location: 34829..35758
location: region:34829-35758:1
so has part: feature:34829-35758:1:exon
subclass of: SO_0000010

position:34829:1
position: 34829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35758:1
position: 35758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34829-35758:1:exon

NHAM_RS23340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23340
old locus tag: Nham_4580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009804176.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TniB family NTP-binding protein
translation: MVVRGEGAYEHLDARYRRYAALPDEERIAWIKADRWVGFDQAAAVLARLEALLVYPPRDRMPCLLIYGDTGMGKTKIIRKFERTHPATLCQSTGVTNRPVVVAQVPSEPVERDLYRELLASLQAPALVGGALAREKDICRSLLRTVGAKLIVLDEVNGMLAGTYRQQRIFLNALRFLANDLRVPLVCAGTDLARQALLTDAQLAERFEAFHLKPWKNDHAYARLLKSLAGILPLRAPSDLDSDAVRERIHMLTSGVTARIFRLIETAAEEAVRSGRERLDLMSFGDDLVLPLVSMTQSARRRAPQAAAR
SIO_010081: NHAM_RS23340
subclass of: SO_0000673
so part of: NHAM_RS23340
location: 34829..35758
location: region:34829-35758:1
so has part: feature:34829-35758:1:exon

WP_041359759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34829-35758:1:exon

NHAM_RS28735
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS28735
so part of: sequence
location: 36355..36975
location: region:36355-36975:1
so has part: feature:36355-36975:1:exon
subclass of: SO_0000010

position:36355:1
position: 36355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36975:1
position: 36975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36355-36975:1:exon

NHAM_RS28735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS28735
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQAWITAGIDRADSERERFERALATLWAPLDHPAAARPVLALWFNEAGWRCPYDVRHAVGVNAPLGRLPVRWRFLTLLALNDTFGGDLRGDGGMPPPAAHLMRRAAPRRERLSRPSRDGRMSSHKSAPQPNTSAWRVKFWLIRAGLQPKAAPATAGARSGTMLGESHNDARDFVRAAICVDCGTLLDKRGHSRLTSGNGPQTRSAQ
SIO_010081: NHAM_RS28735
subclass of: SO_0000673
so part of: NHAM_RS28735
location: 36355..36975
location: region:36355-36975:1
so has part: feature:36355-36975:1:exon

WP_245270144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36355-36975:1:exon

NHAM_RS23350
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23350
old locus tag: Nham_4582
so part of: sequence
location: 37121..38113
location: region:37121-38113:1
so has part: feature:37121-38113:1:exon
subclass of: SO_0000010

position:37121:1
position: 37121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38113:1
position: 38113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37121-38113:1:exon

NHAM_RS23350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23350
old locus tag: Nham_4582
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015341783.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1403 family protein
translation: MSEFYGEKRRAILPFRMPSRARITFEPPPSFAPAPSWLRRRAPPEMVTEALFYAGAALAALHPIARDDHRLGRLWRQRLALASATALARQSGRTEDEAALRDAWYLRRDSDDPGPAGRILNAWRQLGECDSGDVEAWIVALATSLGHPLNALPDQVVELAGRHAKREHTMPVLAAAEIAAASRRVLPNEDLVPLWLADAVLAHQLRWPAPVPLLAAQLSRGALRKAPQHLDGETVFMTALCTAYTTAAVAAIDRYNELARRAARLLAVAPTLRSRDADHTVSVLLIEDAQPAAQGKSASDRSSRRLFERLVALGAVRELTGRPAFRLYGL
SIO_010081: NHAM_RS23350
subclass of: SO_0000673
so part of: NHAM_RS23350
location: 37121..38113
location: region:37121-38113:1
so has part: feature:37121-38113:1:exon

WP_245270145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37121-38113:1:exon

NHAM_RS23355
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23355
old locus tag: Nham_4583
so part of: sequence
location: 38131..38829
location: region:38131-38829:1
so has part: feature:38131-38829:1:exon
subclass of: SO_0000010

position:38131:1
position: 38131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38829:1
position: 38829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38131-38829:1:exon

NHAM_RS23355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23355
old locus tag: Nham_4583
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019200236.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMC-Scp complex subunit ScpB
translation: MGRRARQTDNLDTELTDLPPKLRWREWMGRVEAVIFAAPEPVPREVLARVVGRACNLDLIVDDIRDELRGRPYELVSVAGGWQHRTRKGFAEAIRAATGLGDQVRPLSQAESLILLCIAYYQPITRGELGRFFGQEVSRDLIGYLRRLGFIASGPRAPQPGAPYTYVTTNGFLSHFGFATLRDLPDMEMLEDAGLLSKDKLLAGDFPAGFGAGTTAGDGDDEGPERDELLSD
SIO_010081: NHAM_RS23355
subclass of: SO_0000673
so part of: NHAM_RS23355
location: 38131..38829
location: region:38131-38829:1
so has part: feature:38131-38829:1:exon

WP_011505238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38131-38829:1:exon

NHAM_RS23360
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23360
so part of: sequence
location: complement(39117..39290)
location: region:39117-39290:-1
so has part: feature:39117-39290:-1:exon
subclass of: SO_0000010

position:39117:-1
position: 39117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39290:-1
position: 39290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39117-39290:-1:exon

NHAM_RS23360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIDDLCRVEAARRFAARSSLTRRLIYLRHAISPGVAHALTQLSVAARMAASIATTAA
SIO_010081: NHAM_RS23360
subclass of: SO_0000673
so part of: NHAM_RS23360
location: complement(39117..39290)
location: region:39117-39290:-1
so has part: feature:39117-39290:-1:exon

WP_157043864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39117-39290:-1:exon

NHAM_RS28740
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS28740
so part of: sequence
location: complement(39380..39706)
location: region:39380-39706:-1
so has part: feature:39380-39706:-1:exon
subclass of: SO_0000010

position:39380:-1
position: 39380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39706:-1
position: 39706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39380-39706:-1:exon

NHAM_RS28740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS28740
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MILQAGFGRGGDRLELHGEAGGRRRGSVRVRISVMMGSDDYGAPLLEVFLLVPVEVVDQRVALGRMPRLTGDLAGQRAVGLGDRRVNGGEDIGQSVVGRASRPSPSAI
SIO_010081: NHAM_RS28740
subclass of: SO_0000673
so part of: NHAM_RS28740
location: complement(39380..39706)
location: region:39380-39706:-1
so has part: feature:39380-39706:-1:exon

WP_041359764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39380-39706:-1:exon

NHAM_RS28745
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS28745
so part of: sequence
location: 39656..39991
location: region:39656-39991:1
so has part: feature:39656-39991:1:exon
subclass of: SO_0000010

position:39656:1
position: 39656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39991:1
position: 39991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39656-39991:1:exon

NHAM_RS28745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS28745
inference: COORDINATES: protein motif:HMM:NF023398.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MQLEAIAAAAEAGLKDHDRWQTARTLLARKLDGRRSTSRLPALLDYVLTRLIVSAGMIAGNFRLRPARPRPWSASWGLREATGRGRYRAWGILERRRQIRRRSVRSACGDP
SIO_010081: NHAM_RS28745
subclass of: SO_0000673
so part of: NHAM_RS28745
location: 39656..39991
location: region:39656-39991:1
so has part: feature:39656-39991:1:exon

WP_245270146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39656-39991:1:exon

NHAM_RS23370
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23370
old locus tag: Nham_4586
so part of: sequence
location: 40050..40340
location: region:40050-40340:1
so has part: feature:40050-40340:1:exon
subclass of: SO_0000010

position:40050:1
position: 40050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40340:1
position: 40340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40050-40340:1:exon

NHAM_RS23370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23370
old locus tag: Nham_4586
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001110447.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1778 domain-containing protein
translation: MAQARKKDTKSRSLINLRVSPEDRRLIDRAATATGKNRSEFMLNAARFAAEEALLDKVLFRVDAKTYDGLIAYLDEPPSADANLRKLMQTTPPWRG
SIO_010081: NHAM_RS23370
subclass of: SO_0000673
so part of: NHAM_RS23370
location: 40050..40340
location: region:40050-40340:1
so has part: feature:40050-40340:1:exon

WP_011505239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40050-40340:1:exon

NHAM_RS23375
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23375
old locus tag: Nham_4587
so part of: sequence
location: 40337..40843
location: region:40337-40843:1
so has part: feature:40337-40843:1:exon
subclass of: SO_0000010

position:40337:1
position: 40337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40843:1
position: 40843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40337-40843:1:exon

NHAM_RS23375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23375
old locus tag: Nham_4587
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017423245.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MTKAAPLSLPEVLREDHATESFDSGEPTLDTWLVRRARANQISGASRTYVVCRERKVVGYYALASGGIDLDAAPGRLRRNMPDPLPVVVLGRLAIARGEQGQGLGQAMLRDASLRVLQAAERVGVALLVVHALSERAKQFYLSCGFKESPLDPMTLMTRVKDLGDARV
SIO_010081: NHAM_RS23375
subclass of: SO_0000673
so part of: NHAM_RS23375
location: 40337..40843
location: region:40337-40843:1
so has part: feature:40337-40843:1:exon

WP_041359829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40337-40843:1:exon

NHAM_RS23380
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23380
old locus tag: Nham_4588
so part of: sequence
location: 41155..42996
location: region:41155-42996:1
so has part: feature:41155-42996:1:exon
subclass of: SO_0000010

position:41155:1
position: 41155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42996:1
position: 42996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41155-42996:1:exon

NHAM_RS23380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23380
old locus tag: Nham_4588
EC number: 2.7.7.65
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004211994.1
GO function: GO:0009975 - cyclase activity [Evidence IEA]
GO process: GO:0009966 - regulation of signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diguanylate cyclase
translation: MRLATITNWAYGATLLLTFASGATMLLASNVQDGERAAVAQRELLDQASAKIATEVTSLSDKAREYVITGDPVHLDIYQRDVTALRSVEERVRKIEDLGASPDEVNALTDAMRLADALQDEQQDAVKIRQQGDADRARSILFGIEYDRQLDRVAADVERFQYRLDQRTDSEVAAAVNVSKLWKTFSEVVLGVTGLLFLCVLYFVFKRRVLRPVVKLSDVVNRLAAQDYAVEPPDYGEIDEIGDMAQAIRVFRENGLERQRLEEERNADFAKRALLSRMTQRMQECETMAQLERVIGGFVPEIAPGLAGRLYLLDESRNLLVEACSWLGAVRSPREFPPIACWALQRGELHRPKGCAADVVCDHLGDEQPIDSICLPLNAQRTTVGLLYLEPRSDLCQPDPNVPEIYLKILAENVGLAVGNLRLRDRLRAMAMLDPLTGLANRRQLETVLESRLLEANRANQPISCIMLDVDHFKRFNDDYGHDAGDVVLRAVGDLLKRSTRDTDAFRYGGEEFLLLMPDMGAEHALLRAEETRCKIKDLQVEHGGRELGTITASLGTATAPDHCMFSQLVRTADAALLRAKESGRNCVVQAEQRGIAPEEAAQTSRSVSADSE
SIO_010081: NHAM_RS23380
subclass of: SO_0000673
so part of: NHAM_RS23380
location: 41155..42996
location: region:41155-42996:1
so has part: feature:41155-42996:1:exon

WP_011505241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41155-42996:1:exon

NHAM_RS23390
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23390
old locus tag: Nham_4590
so part of: sequence
location: 43982..45325
location: region:43982-45325:1
so has part: feature:43982-45325:1:exon
subclass of: SO_0000010

position:43982:1
position: 43982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45325:1
position: 45325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43982-45325:1:exon

NHAM_RS23390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23390
old locus tag: Nham_4590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011510130.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1380-like element ISNha3 family transposase
translation: MTDDTILPFSFPAVHAKKVTAAFDGGRLTSNGGVMLLATAERRLGLADKLARVFPDRRDPTRVVHSLVDMFRARMFAICCGYEDADDLDHLRSDPAFKLACGRLPDSGRDLCSQPTLSRLENAPRLRDVIRLTYTLVDAWMDSYPREPASVTLDIDDTCDVVHGHQQLSLFNAHYDERCFLPIHVYDTEKSRPVAVVLRPGKTPGGVEVRAHLRRLVRHIRTRWHNTRITVRGDGHYARPEAMTWCENNGIDYIFGLSGTKPLARKVDEVADDIRTRRAIENLAVLRGYTETRHKAKSWDRERRTVARIEATMLGLDIRFVVTSLDAGSAEWIYDSLYCARGQAENLIKLHKTQLASDRTSCRSALANQVRLVLHTAAYWLMLTVRDAIPKARELATAEFATLRLRLLKIAARVVETASRIRLAFAAACPEADLFRSLPGSLLPHGP
SIO_010081: NHAM_RS23390
subclass of: SO_0000673
so part of: NHAM_RS23390
location: 43982..45325
location: region:43982-45325:1
so has part: feature:43982-45325:1:exon

WP_011510130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43982-45325:1:exon

NHAM_RS27370
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS27370
old locus tag: Nham_4591
so part of: sequence
location: 45569..45823
location: region:45569-45823:1
so has part: feature:45569-45823:1:exon
subclass of: SO_0000010

position:45569:1
position: 45569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45823:1
position: 45823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45569-45823:1:exon

NHAM_RS27370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS27370
old locus tag: Nham_4591
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLAKAIARHTKEQVTTHGFRSTFRDWAGDMTNFSREVCEQALAHAVADETEAAYRRSDALVKRRRLMDEWATYCAGGWSVRHG
SIO_010081: NHAM_RS27370
subclass of: SO_0000673
so part of: NHAM_RS27370
location: 45569..45823
location: region:45569-45823:1
so has part: feature:45569-45823:1:exon

WP_157043865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45569-45823:1:exon

NHAM_RS23395
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23395
old locus tag: Nham_4592
so part of: sequence
location: complement(45836..46090)
location: region:45836-46090:-1
so has part: feature:45836-46090:-1:exon
subclass of: SO_0000010

position:45836:-1
position: 45836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46090:-1
position: 46090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45836-46090:-1:exon

NHAM_RS23395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23395
old locus tag: Nham_4592
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011512263.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDDKVKIRCPACTHIFRENASRVRDGAQVNCLNCNKLITLTKETEDPFLRRALKAAREIRAAKDAAVHAAIYSGVASAPRREMP
SIO_010081: NHAM_RS23395
subclass of: SO_0000673
so part of: NHAM_RS23395
location: complement(45836..46090)
location: region:45836-46090:-1
so has part: feature:45836-46090:-1:exon

WP_011505242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45836-46090:-1:exon

NHAM_RS25995
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS25995
pseudo: true
so part of: sequence
location: <46371..>46616
location: region:46371-46616:1
so has part: feature:46371-46616:1:exon
subclass of: SO_0000010

position:46371:1
position: 46371
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:46616:1
position: 46616
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46371-46616:1:exon

NHAM_RS25995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS25995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011090936.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: NHAM_RS25995
subclass of: SO_0000673
so part of: NHAM_RS25995
location: <46371..>46616
location: region:46371-46616:1
so has part: feature:46371-46616:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46371-46616:1:exon

NHAM_RS23405
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23405
old locus tag: Nham_4594
so part of: sequence
location: complement(46677..48005)
location: region:46677-48005:-1
so has part: feature:46677-48005:-1:exon
subclass of: SO_0000010

position:46677:-1
position: 46677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48005:-1
position: 48005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46677-48005:-1:exon

NHAM_RS23405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23405
old locus tag: Nham_4594
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014762198.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hemolysin family protein
translation: MPDGDGSSLNLIGIVLIFVLVAANGFFVAAEFSLVAVRPSRVAELVAGGSRRALVLQRAIQHLDVNLAATQLGITISSLALGWIGEPALAGLIQPLWKAFPDSLATAGAHAVAVVVSFSIITTLHIVLGELAPKSLALQRSESTALVIVRPLGLFLLILRPAIVILNGLGNLILRLCGLRPGTGESSLHSPEELKLLVQASQDAGILQDAQEEVVLRVLNIGERQVGDIMTARPEIDWVNADSDRADMLDTIRNCPHEQLLVGRGSIDEPLGMLLKKDLLNRVLGGEGLDPLEVIREPLLVLESMSVFRMLDMFKQAPVRLAIVVDEYGILQGIVTQTDLLEAIAGDLPNSEDGSADIIEREDGSLLLDGMTPAHDVFDRLAFRKRPENGDYHTVAGFALSQLGHLPGIGESFVYEDWCFEIVDLDGRRIGKILATRMTLVP
SIO_010081: NHAM_RS23405
subclass of: SO_0000673
so part of: NHAM_RS23405
location: complement(46677..48005)
location: region:46677-48005:-1
so has part: feature:46677-48005:-1:exon

WP_011505244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46677-48005:-1:exon

NHAM_RS26000
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS26000
old locus tag: Nham_4595
pseudo: true
so part of: sequence
location: 48423..>48848
location: region:48423-48848:1
so has part: feature:48423-48848:1:exon
subclass of: SO_0000010

position:48423:1
position: 48423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48848:1
position: 48848
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48423-48848:1:exon

NHAM_RS26000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS26000
old locus tag: Nham_4595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010960204.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: NHAM_RS26000
subclass of: SO_0000673
so part of: NHAM_RS26000
location: 48423..>48848
location: region:48423-48848:1
so has part: feature:48423-48848:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48423-48848:1:exon

NHAM_RS28750
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS28750
so part of: sequence
location: complement(48761..49018)
location: region:48761-49018:-1
so has part: feature:48761-49018:-1:exon
subclass of: SO_0000010

position:48761:-1
position: 48761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49018:-1
position: 49018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48761-49018:-1:exon

NHAM_RS28750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS28750
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDCECLCCERGLDSERLQTHDDLGADIPVNAHASERDAAITAMIEHHGFHLGQKHTSMMVPPRSRAPRVSRNSAIATNITFVNS
SIO_010081: NHAM_RS28750
subclass of: SO_0000673
so part of: NHAM_RS28750
location: complement(48761..49018)
location: region:48761-49018:-1
so has part: feature:48761-49018:-1:exon

WP_245270147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48761-49018:-1:exon

NHAM_RS23410
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23410
old locus tag: Nham_4596
so part of: sequence
location: 49051..49818
location: region:49051-49818:1
so has part: feature:49051-49818:1:exon
subclass of: SO_0000010

position:49051:1
position: 49051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49818:1
position: 49818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49051-49818:1:exon

NHAM_RS23410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23410
old locus tag: Nham_4596
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MEQARYEVGRARRQYDAVDPDNRLVASELETRWNERLTIARDLEAELQELTASPAAEPAPADRERLMMLGADLQSAWTSAGVTPEAKKRIVRTVIDEIVVRVEDNALDLVIRWHGRDHSALKVKKNRTGQHHWSVEGETIVVRVLTRQMPDKAIASVLNRAGKTTGRGNGWTQSRVCSLRSHNTIPTYREGERRERGEVTLDEAAAAPSVSPSTVRRLLKDGQLSANQLCKGAPWIIHAADLDRNDVKGAATARL
SIO_010081: NHAM_RS23410
subclass of: SO_0000673
so part of: NHAM_RS23410
location: 49051..49818
location: region:49051-49818:1
so has part: feature:49051-49818:1:exon

WP_245270148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49051-49818:1:exon

NHAM_RS23415
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: tnpA
locus tag: NHAM_RS23415
old locus tag: Nham_4597
so part of: sequence
location: 50051..50476
location: region:50051-50476:1
so has part: feature:50051-50476:1:exon
subclass of: SO_0000010

position:50051:1
position: 50051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50476:1
position: 50476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50051-50476:1:exon

NHAM_RS23415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: tnpA
locus tag: NHAM_RS23415
old locus tag: Nham_4597
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013554209.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MQTAKSGSHTVWDCKYHIVWVTKYRFAVLGGDVGFRARELLREIALSHEMVIHAGTINRDHVHLLLSIPPHLSVSRAVQYLKGKSSHKLLTEYQSLRKRYWGSIYGQGYWVASSGNVTDEVWKKYIEDQKPPEPDDNFKVV
SIO_010081: NHAM_RS23415
subclass of: SO_0000673
so part of: NHAM_RS23415
location: 50051..50476
location: region:50051-50476:1
so has part: feature:50051-50476:1:exon

WP_011505245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50051-50476:1:exon

NHAM_RS23420
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: nhaA
locus tag: NHAM_RS23420
old locus tag: Nham_4598
so part of: sequence
location: 50684..51910
location: region:50684-51910:1
so has part: feature:50684-51910:1:exon
subclass of: SO_0000010

position:50684:1
position: 50684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51910:1
position: 51910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50684-51910:1:exon

NHAM_RS23420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: nhaA
locus tag: NHAM_RS23420
old locus tag: Nham_4598
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011505246.1
GO function: GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO process: GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na+/H+ antiporter NhaA
translation: MRVRFGQYPNCGKRMVLEPGRLRPYSILRSFLDSEASAGLTLMFVAALALLLANSPFAPVYFDVLHRQVLGLTVLHWINDALMAVFFLLVGLEIKREFLDGQLATWSRRALPGIAALGGMVVPAVIFIAVNGGEPANLRGWAIPSATDIAFALGVLSLLGPRVPVSLKIFLTALAILDDLGAVLIIALFYTAELTPLMLILAAATLLGLAALNRFGVKPLAPYLVLGVVLWFFVLQSGIHATLAGVALALAIPLQASTGGGPTSPLHRLEHALNPWVAFLIVPVFGFANAGVSFAGLGLSALLDPVPLGVALGLFFGKQVGVFGFAWLAIWLKIADMPRYASWAHLYGVAVLCGIGFTMSLFIGLLAYPESAVLQDETKIGVLLGSTLAGLIGWLILRVTKAGFPERT
SIO_010081: NHAM_RS23420
subclass of: SO_0000673
so part of: NHAM_RS23420
location: 50684..51910
location: region:50684-51910:1
so has part: feature:50684-51910:1:exon

WP_011505246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50684-51910:1:exon

NHAM_RS23425
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23425
old locus tag: Nham_4599
so part of: sequence
location: 51953..53017
location: region:51953-53017:1
so has part: feature:51953-53017:1:exon
subclass of: SO_0000010

position:51953:1
position: 51953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53017:1
position: 53017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51953-53017:1:exon

NHAM_RS23425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23425
old locus tag: Nham_4599
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611419.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MIPEAREVRLSRKDRNVLEACCRSPVTLQRDLKRARIVLLAADGRSTRSIAKEVGVQPRIVSLWRHRYADHGLEGLQDKPRPGKQPIYTKATDKRILKLLDKPPPQGFARWTGPLLAGALGDVDVQYVWRFLRSHKIDLAARKSWCESNDPNFTAKAADVVGLYVAPPAKAIVLCVDEKPSIQALERAQGYLKLPNGRALTGQSHDYKRHGTTTLFAALEVATGKIIAAHSKRRRRVEFLDFMNSVTAAFPDRKIHVILDNLNTHKKNEHWLKAHPNVQFHFTPTSASWLNQVEVWFSILQGQSLSGASFTSLKQLQEHIDAYVNAYNDKAEPFLWTKKKVRQRRFQGRRITQL
SIO_010081: NHAM_RS23425
subclass of: SO_0000673
so part of: NHAM_RS23425
location: 51953..53017
location: region:51953-53017:1
so has part: feature:51953-53017:1:exon

WP_011505247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51953-53017:1:exon

NHAM_RS23430
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23430
old locus tag: Nham_4600
so part of: sequence
location: 53096..54199
location: region:53096-54199:1
so has part: feature:53096-54199:1:exon
subclass of: SO_0000010

position:53096:1
position: 53096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54199:1
position: 54199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53096-54199:1:exon

NHAM_RS23430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23430
old locus tag: Nham_4600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011504889.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MANAAGRPVSPLILSADERAYLERQVRRHRVARSLSERCRVILRCADGIPSKSVAHELGVHEHTVGKWRRRFLKGRIEGLLDEARPGRPRTIDDDQVAAIIERTLRSTPSDATHWSIRSMATATGFSHTTIRRIWNAFGLQPHRSETFKLSSDPLFVDKVRDIVGLYLSPPNRALVLSVDEKSQIQALDREQPVLPMMPGIPERRTHSYIRHGTTSLFAALDVASGFVIGKCYKRHRAAEFLDFLKQIDAHIPDGLDIHIIMDNYATHKTAVIKSWLVRRPHYHVHFTPTSASWINQVERWFAELTRKQIRRGVHTSTKQLEKDIRAFIERHNENPRPYRWTKSADEILASVKRFCQKTQQTLCHEF
SIO_010081: NHAM_RS23430
subclass of: SO_0000673
so part of: NHAM_RS23430
location: 53096..54199
location: region:53096-54199:1
so has part: feature:53096-54199:1:exon

WP_011505248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53096-54199:1:exon

NHAM_RS23435
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23435
old locus tag: Nham_4601
so part of: sequence
location: 54790..55854
location: region:54790-55854:1
so has part: feature:54790-55854:1:exon
subclass of: SO_0000010

position:54790:1
position: 54790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55854:1
position: 55854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54790-55854:1:exon

NHAM_RS23435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23435
old locus tag: Nham_4601
EC number: 1.14.19.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011510990.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fatty acid desaturase
translation: MDQHTNNAHATSDFRHLAHALSCYREPNCTRSVFEIVITAGPFALTWFLIWTCLDAGYWMALLLAVPAAGLLLRLFMIQHDCGHGSFFRHRLANDWVGRVIGVLTLTPYDFWRRAHALHHAGSGNLDRRGIGDIDTLTVREFLALPKGRRLLYRLYRNPIVMFGVGPAYMFILRHRLPMGLIRSGWQPWLSAMATNVAIAVLVATMIWLIGVGPFLLVQLPITLIAASIGVWLFYVQHQFEDTFWAHDEGWNFHEAGLHGSSHYDLPSVLRWFTANIGIHHVHHLCSRIPYYRLPQVLRDHPQLSAVGRLTLFESLRCVRKVLWDEGRHKLVSFREMESVPSPASRAVSGSGYH
SIO_010081: NHAM_RS23435
subclass of: SO_0000673
so part of: NHAM_RS23435
location: 54790..55854
location: region:54790-55854:1
so has part: feature:54790-55854:1:exon

WP_011505249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54790-55854:1:exon

NHAM_RS23440
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23440
old locus tag: Nham_4602
so part of: sequence
location: 55950..56873
location: region:55950-56873:1
so has part: feature:55950-56873:1:exon
subclass of: SO_0000010

position:55950:1
position: 55950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56873:1
position: 56873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55950-56873:1:exon

NHAM_RS23440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23440
old locus tag: Nham_4602
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008888406.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PHB depolymerase family esterase
translation: MQGSNDTSDRLSNLVGFGTNPGSLRSLTHIPENLPDAAPLVVVLHGCEQTATDYDRGSGWSELADRHGFALLFPEQRRSNNWLLAFNWFEPCDSHRDSGEPLSIRQMIEQVVSDHGIDRQRIFVTGLSAGGAMASVLLATYPEAFAGGAIIAGLPYGCASTIPDAFRRMRGQRGGPTAQQLAARLRDASEHDGPWPTISIWHGSRDRTVDPSNSEEILQQWLTLHDLERMPSRAHIVDGYPRRVWSDPEGHELLEEYRITGMGHGIPLNTSGRHGCGSSGDYMLDVNISSTRHIAAFWGLRAVGAAD
SIO_010081: NHAM_RS23440
subclass of: SO_0000673
so part of: NHAM_RS23440
location: 55950..56873
location: region:55950-56873:1
so has part: feature:55950-56873:1:exon

WP_041359770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55950-56873:1:exon

NHAM_RS28755
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS28755
old locus tag: Nham_4603
pseudo: true
so part of: sequence
location: <56949..57243
location: region:56949-57243:1
so has part: feature:56949-57243:1:exon
subclass of: SO_0000010

position:56949:1
position: 56949
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:57243:1
position: 57243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56949-57243:1:exon

NHAM_RS28755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS28755
old locus tag: Nham_4603
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611416.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: NHAM_RS28755
subclass of: SO_0000673
so part of: NHAM_RS28755
location: <56949..57243
location: region:56949-57243:1
so has part: feature:56949-57243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56949-57243:1:exon

NHAM_RS26005
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS26005
old locus tag: Nham_4604
pseudo: true
so part of: sequence
location: complement(57395..57983)
location: region:57395-57983:-1
so has part: feature:57395-57983:-1:exon
subclass of: SO_0000010

position:57395:-1
position: 57395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57983:-1
position: 57983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57395-57983:-1:exon

NHAM_RS26005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS26005
old locus tag: Nham_4604
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011744672.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: chemotaxis protein CheB
SIO_010081: NHAM_RS26005
subclass of: SO_0000673
so part of: NHAM_RS26005
location: complement(57395..57983)
location: region:57395-57983:-1
so has part: feature:57395-57983:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57395-57983:-1:exon

NHAM_RS23460
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23460
old locus tag: Nham_4605
so part of: sequence
location: complement(57980..61258)
location: region:57980-61258:-1
so has part: feature:57980-61258:-1:exon
subclass of: SO_0000010

position:57980:-1
position: 57980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61258:-1
position: 61258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57980-61258:-1:exon

NHAM_RS23460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23460
old locus tag: Nham_4605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012496700.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheB
translation: MLPQELHGEKVEGKQPTPDQSGVIATKRRPPSLVVGIGASAGGLDAFKSFFEGVPADTGMSFVLVQHLDPNHKSLLVELLRPHTSMRVEEARDGVALAANHIFVIPPNATMTMEGDLLRVSTPAPAREYRRPIDTFFTSLAENQQECAVAVVLSGVGSDGTLGVKAIKENGGYTFAQAEFNETAMSGMPRSAVATGLVDCVAPVKNLPAKRLEHQAHLTKVEEQKDSEGVRDDVRESLTTITSLLRKRLKHDFSGYKQNTIIRRVQRRMQVLQIEAVPAYVERLRREPPEADALFRELLIGVTQFFRDESAFEALKTAILPSLLAAKQPDDTIRVWVAGCATGEEVYSIAIVLKEAMAELNVEPSVTIFGTDIDGKAVAFARAARYRKTDGVSPERLGRWFVREREHYCPVATIREMCVFSQHSIIKDPPFSKLDLVSCRNVLIYMDNEFQHRVMQTFHYGLNPGGYLFLGPSESVSREIKLFTIIDKKHRILQRQDGVRATLPVVQTASSLRAVEPTWSAEVHAEDGIDQSARRAMDKYAPAYFVIDRHCEVLRFSGAETGRYLEPSPGTATLNLFGILAKALRSQVRNAVDTSFATHQTVVDETVAATIDGRWYSVQLIVEPIVEIARSPAFFIVAFRERGPLTNGGEAGKTAPAVSDLDAASHQQELRSWQARYKAASNELETHIENMKSVTEEYQSVNEELQSSNEELETAKEEMQSVNEELQTVNSEMQSKNDQLNGVNNDLQNLLDSTQIATIFLDDNLHIKNFTPAAMELFALHDCDRGRAITDIVTLLAYDKLREDVRKVQRTLAVVEQELDLKDESATFIMRIRPYRTVKNVITGVVITFTDITERKAQDDQLRVLMKELQHRTNNLFRVIQAMARQTAKHSANFADFEVQFGARIQGLSESNTLLIGQNWQSVSLERLVRTQLAPFIGTDQARLEIDGLAVFVATEAVQTLGLALHELATNASKYGALSVPGGRILLQWKFTGGDKIPEGFRLEWRERGGPTVKPAKRRGFGRFVIDQMVTSSLHATVGIDLAPEGFRWTLDMPASQVQRAMPDKEGMKNGESGSAPLFDVGIKKPEQSDYL
SIO_010081: NHAM_RS23460
subclass of: SO_0000673
so part of: NHAM_RS23460
location: complement(57980..61258)
location: region:57980-61258:-1
so has part: feature:57980-61258:-1:exon

WP_011505251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57980-61258:-1:exon

NHAM_RS28760
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS28760
pseudo: true
so part of: sequence
location: <61515..>61619
location: region:61515-61619:1
so has part: feature:61515-61619:1:exon
subclass of: SO_0000010

position:61515:1
position: 61515
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:61619:1
position: 61619
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61515-61619:1:exon

NHAM_RS28760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS28760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612206.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: NHAM_RS28760
subclass of: SO_0000673
so part of: NHAM_RS28760
location: <61515..>61619
location: region:61515-61619:1
so has part: feature:61515-61619:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61515-61619:1:exon

NHAM_RS23475
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23475
old locus tag: Nham_4607
so part of: sequence
location: 62000..63430
location: region:62000-63430:1
so has part: feature:62000-63430:1:exon
subclass of: SO_0000010

position:62000:1
position: 62000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63430:1
position: 63430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62000-63430:1:exon

NHAM_RS23475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23475
old locus tag: Nham_4607
inference: COORDINATES: protein motif:HMM:NF012464.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTETRCALYARVSSEAQTRDNTIASQVVALQERIAADGFLLEPDHSYVDDGYSGSLLLRPALERLRDAVAGGQVDRLYVHAPDRLARRYAHQALLIDEFRRAGVEIVFLNRPIGGTAEDDLLLQVQGVIAEYERAKILERSRRGRRHAACSGSVSALTGAPFGYRYVSRDQGGGLARFEVVEAEAHIVRLIFAWVGLDRMSLREVCRRLEQIGCRTRTGTTPCYASTIRGILANPAYVGRAAFGRARYLPPRPRLRPIRGHLQPSPHATSRVAVPPEEWIEIPVSSLVDPAVFEAVHAQFEENRKRKRQRTPSSDWLLQGLTVCRRCGYAYYGKRAPRVHKYDPTDTLRYYRCIGTDGHRFSGHRVCDNPQVRGDHLEEAVWDQVKGLLEDPHRVAGEYRRRLLAARDQVREPEEIVRLERQMATLRRGIGRLIDSYAEGIIDKAEFEPRIAGLKQRFSQLQERHQAAVEVAECEL
SIO_010081: NHAM_RS23475
subclass of: SO_0000673
so part of: NHAM_RS23475
location: 62000..63430
location: region:62000-63430:1
so has part: feature:62000-63430:1:exon

WP_011505253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62000-63430:1:exon

NHAM_RS26015
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS26015
pseudo: true
so part of: sequence
location: <63627..63791
location: region:63627-63791:1
so has part: feature:63627-63791:1:exon
subclass of: SO_0000010

position:63627:1
position: 63627
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:63791:1
position: 63791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63627-63791:1:exon

NHAM_RS26015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS26015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612206.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: NHAM_RS26015
subclass of: SO_0000673
so part of: NHAM_RS26015
location: <63627..63791
location: region:63627-63791:1
so has part: feature:63627-63791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63627-63791:1:exon

NHAM_RS26020
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS26020
old locus tag: Nham_4609
pseudo: true
so part of: sequence
location: 64038..65080
location: region:64038-65080:1
so has part: feature:64038-65080:1:exon
subclass of: SO_0000010

position:64038:1
position: 64038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65080:1
position: 65080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64038-65080:1:exon

NHAM_RS26020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS26020
old locus tag: Nham_4609
inference: COORDINATES: protein motif:HMM:NF026092.2
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycogen debranching N-terminal domain-containing protein
SIO_010081: NHAM_RS26020
subclass of: SO_0000673
so part of: NHAM_RS26020
location: 64038..65080
location: region:64038-65080:1
so has part: feature:64038-65080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64038-65080:1:exon

NHAM_RS28765
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS28765
pseudo: true
so part of: sequence
location: complement(65133..>65456)
location: region:65133-65456:-1
so has part: feature:65133-65456:-1:exon
subclass of: SO_0000010

position:65133:-1
position: 65133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65456:-1
position: 65456
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65133-65456:-1:exon

NHAM_RS28765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS28765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010909820.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: NHAM_RS28765
subclass of: SO_0000673
so part of: NHAM_RS28765
location: complement(65133..>65456)
location: region:65133-65456:-1
so has part: feature:65133-65456:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65133-65456:-1:exon

NHAM_RS23485
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: nhaA
locus tag: NHAM_RS23485
old locus tag: Nham_4610
pseudo: true
so part of: sequence
location: complement(65499..66667)
location: region:65499-66667:-1
so has part: feature:65499-66667:-1:exon
subclass of: SO_0000010

position:65499:-1
position: 65499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66667:-1
position: 66667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65499-66667:-1:exon

NHAM_RS23485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: nhaA
locus tag: NHAM_RS23485
old locus tag: Nham_4610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008872444.1
GO function: GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO process: GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Na+/H+ antiporter NhaA
SIO_010081: NHAM_RS23485
subclass of: SO_0000673
so part of: NHAM_RS23485
location: complement(65499..66667)
location: region:65499-66667:-1
so has part: feature:65499-66667:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65499-66667:-1:exon

NHAM_RS23490
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23490
old locus tag: Nham_4611
so part of: sequence
location: complement(66743..68224)
location: region:66743-68224:-1
so has part: feature:66743-68224:-1:exon
subclass of: SO_0000010

position:66743:-1
position: 66743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68224:-1
position: 68224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66743-68224:-1:exon

NHAM_RS23490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23490
old locus tag: Nham_4611
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011505254.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015103 - inorganic anion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SulP family inorganic anion transporter
translation: MRFFQAFRREWLTNIPTELLSGTLVALALIPEAIGFSIVAGVDPKVGLYASFSIACVTAIVGGRPAMISAATASTAVLMITLVRDHGLQYLFAATVLMGLIQILAGALRLGLLMKFVSRSVMTGFVNALAILIFLAQLPQLTHVGWQTYAMVAVGLSIIYLFPFVTKRVPSALVSIVALTAFTIYSGIKLRTVGDMGELPSSLPFFAIPQVPFTLETLKIILPYSLTMAAVGLLESLLTASIVDDMTDAGSNKNRECVGQGVANFVTGFLGAMGGCAMIGQSVINVTAGARTRLSTFFAGAFLLFLIVVLGDWVKQIPMAALVAVMIMVSISTFNWSSVTSLRSHPLSSSVVMLATVVVVVATGDLSMGVLTGVILSGVFFAAKVARLLGIVTEPSEDGSQINYYVTGQVFFASAGSLIDAFDYLDVPARVRIDVSEAHFWDITAIGALDDIVLKLRRHGAQVEIIGLNKASATMVERFGRHHRLSVGQKAVH
SIO_010081: NHAM_RS23490
subclass of: SO_0000673
so part of: NHAM_RS23490
location: complement(66743..68224)
location: region:66743-68224:-1
so has part: feature:66743-68224:-1:exon

WP_011505254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66743-68224:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 323097
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF03058
inference: COORDINATES: profile:INFERNAL:1.1.4
note: sul1 is cis-regulatory element that is thought to sense ions involved in sulfur or methionine metabolism; They are found in Alphaproteobacteria; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(68306..68363)
location: region:68306-68363:-1
so has part: feature:68306-68363:-1:region

position:68306:-1
position: 68306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68363:-1
position: 68363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68306-68363:-1:region

NHAM_RS28770
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS28770
old locus tag: Nham_4612
pseudo: true
so part of: sequence
location: complement(68619..>68807)
location: region:68619-68807:-1
so has part: feature:68619-68807:-1:exon
subclass of: SO_0000010

position:68619:-1
position: 68619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68807:-1
position: 68807
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68619-68807:-1:exon

NHAM_RS28770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS28770
old locus tag: Nham_4612
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558360.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS4 family transposase
SIO_010081: NHAM_RS28770
subclass of: SO_0000673
so part of: NHAM_RS28770
location: complement(68619..>68807)
location: region:68619-68807:-1
so has part: feature:68619-68807:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68619-68807:-1:exon

NHAM_RS27390
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS27390
so part of: sequence
location: complement(68969..69163)
location: region:68969-69163:-1
so has part: feature:68969-69163:-1:exon
subclass of: SO_0000010

position:68969:-1
position: 68969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69163:-1
position: 69163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68969-69163:-1:exon

NHAM_RS27390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS27390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAEIIWLCDRRAEADADRAIDLRTAVDVAIRDLQEIQAHWGTELALERLAECRSMLRTVLEAS
SIO_010081: NHAM_RS27390
subclass of: SO_0000673
so part of: NHAM_RS27390
location: complement(68969..69163)
location: region:68969-69163:-1
so has part: feature:68969-69163:-1:exon

WP_157043870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68969-69163:-1:exon

NHAM_RS23495
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23495
old locus tag: Nham_4613
so part of: sequence
location: 69424..70143
location: region:69424-70143:1
so has part: feature:69424-70143:1:exon
subclass of: SO_0000010

position:69424:1
position: 69424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70143:1
position: 70143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69424-70143:1:exon

NHAM_RS23495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23495
old locus tag: Nham_4613
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011505255.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVSAAVVLREDNAIERPAALLSRAEVLTRYRHLREISRQHHSAVLDFLSKDTIISQARRLGLAQGKTLLLDSMDDLNFVFDLAIHTAKDRSRAIDRYARAARLAPGSDESLMLEAMRRARFAIISIVRRHPVAGLIVKDLFRGVEVWLVDEGLESSLPDGAALATRLFTPEGFAMTAGVLVPLDIELIEDAIADTPQLLRNRREELIDDRRFAEAIYRVALVSGLMEQVAYQDTIAEAG
SIO_010081: NHAM_RS23495
subclass of: SO_0000673
so part of: NHAM_RS23495
location: 69424..70143
location: region:69424-70143:1
so has part: feature:69424-70143:1:exon

WP_011505255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69424-70143:1:exon

NHAM_RS23500
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23500
old locus tag: Nham_4614
so part of: sequence
location: 70140..70376
location: region:70140-70376:1
so has part: feature:70140-70376:1:exon
subclass of: SO_0000010

position:70140:1
position: 70140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70376:1
position: 70376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70140-70376:1:exon

NHAM_RS23500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23500
old locus tag: Nham_4614
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLERRSDRRRAFRWREMLENGTHATIAEIATAEKINETYGGGHQVRRMRADPPHCRWSGALAAGRTVAWSALTQTRG
SIO_010081: NHAM_RS23500
subclass of: SO_0000673
so part of: NHAM_RS23500
location: 70140..70376
location: region:70140-70376:1
so has part: feature:70140-70376:1:exon

WP_011505256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70140-70376:1:exon

NHAM_RS23505
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23505
old locus tag: Nham_4615
so part of: sequence
location: 70485..70940
location: region:70485-70940:1
so has part: feature:70485-70940:1:exon
subclass of: SO_0000010

position:70485:1
position: 70485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70940:1
position: 70940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70485-70940:1:exon

NHAM_RS23505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23505
old locus tag: Nham_4615
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFQITILKVLAGHPDGRASVAELTRYVSILMSSGSDWTDCMRRLAARAPKLEIFADSFVLRDDRGWCITDSGRQFLASLEAPTPAWSEEQEQPTGARVTFVTAPSQVQPTLRLVVDNTGTSQPGLGPDETRRPAWSALRPSSTMGGEGRS
SIO_010081: NHAM_RS23505
subclass of: SO_0000673
so part of: NHAM_RS23505
location: 70485..70940
location: region:70485-70940:1
so has part: feature:70485-70940:1:exon

WP_011505257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70485-70940:1:exon

NHAM_RS28775
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS28775
pseudo: true
so part of: sequence
location: complement(<71032..>71160)
location: region:71032-71160:-1
so has part: feature:71032-71160:-1:exon
subclass of: SO_0000010

position:71032:-1
position: 71032
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:71160:-1
position: 71160
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71032-71160:-1:exon

NHAM_RS28775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS28775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016845155.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: sensor histidine kinase
SIO_010081: NHAM_RS28775
subclass of: SO_0000673
so part of: NHAM_RS28775
location: complement(<71032..>71160)
location: region:71032-71160:-1
so has part: feature:71032-71160:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71032-71160:-1:exon

NHAM_RS24365
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS24365
old locus tag: Nham_4618
so part of: sequence
location: complement(72649..74013)
location: region:72649-74013:-1
so has part: feature:72649-74013:-1:exon
subclass of: SO_0000010

position:72649:-1
position: 72649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74013:-1
position: 74013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72649-74013:-1:exon

NHAM_RS24365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS24365
old locus tag: Nham_4618
inference: COORDINATES: protein motif:HMM:NF024983.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing protein
translation: MTRLNSDLSNLLDSTEIATLFLDENLRVRRFTRGVNEIFHLRDADIGRPITEIVSLLEYRDLQRDVKTVLRKLSTVERQVTLHDIRTTFILRVRPYRTVDNVIDGVVLTFVDITDRQAANEAVRASEARYRMLFEFIDEGFCTLEKVETRPGELSDFRYLSANPGFAQQSGVGNVVGRTIREMFPKEPQEWFDIYDGVMATGEAVRFERDLVSVGRMLELFAFRFDDGAGLKLGVIFQDVSDRKRHDGQRELLLNEMDHRIKNLFAITSGVVSLSARSATTPKEMATAIQGRLGALASAHQLVRPRRLEAGSANPIVTLADIIQTVLRPYSATEDPRDEPRSVIEGPDVAVGGDAVTSLAMVLHELATNAAKYGAYSKAGGRVEVTWSVKKGRLELSWTERGGPRVNGAPEREGFGSQLARKSINGQLDGQMTYDWNPDGLTVRLSAAAERLSS
SIO_010081: NHAM_RS24365
subclass of: SO_0000673
so part of: NHAM_RS24365
location: complement(72649..74013)
location: region:72649-74013:-1
so has part: feature:72649-74013:-1:exon

WP_011505260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72649-74013:-1:exon

NHAM_RS23525
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23525
old locus tag: Nham_4619
pseudo: true
so part of: sequence
location: <74173..74718
location: region:74173-74718:1
so has part: feature:74173-74718:1:exon
subclass of: SO_0000010

position:74173:1
position: 74173
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:74718:1
position: 74718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74173-74718:1:exon

NHAM_RS23525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23525
old locus tag: Nham_4619
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007674248.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: NHAM_RS23525
subclass of: SO_0000673
so part of: NHAM_RS23525
location: <74173..74718
location: region:74173-74718:1
so has part: feature:74173-74718:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74173-74718:1:exon

NHAM_RS23530
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23530
old locus tag: Nham_4620
so part of: sequence
location: complement(74752..75144)
location: region:74752-75144:-1
so has part: feature:74752-75144:-1:exon
subclass of: SO_0000010

position:74752:-1
position: 74752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75144:-1
position: 75144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74752-75144:-1:exon

NHAM_RS23530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23530
old locus tag: Nham_4620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003597873.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhodanese-like domain-containing protein
translation: MATKRAKDLVAEANRNVETLSGAEAEKLVSDSDVVFVDIRESDELQKTGTLKGALHVPRGFLEFQADPTSPTHKPELGGGKKLVLYCGSGSRSALGANTLMEMGIINIAHVAGGFPALQQAGAPCEEAKQ
SIO_010081: NHAM_RS23530
subclass of: SO_0000673
so part of: NHAM_RS23530
location: complement(74752..75144)
location: region:74752-75144:-1
so has part: feature:74752-75144:-1:exon

WP_011505261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74752-75144:-1:exon

NHAM_RS23535
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23535
old locus tag: Nham_4621
so part of: sequence
location: complement(75255..76163)
location: region:75255-76163:-1
so has part: feature:75255-76163:-1:exon
subclass of: SO_0000010

position:75255:-1
position: 75255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76163:-1
position: 76163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75255-76163:-1:exon

NHAM_RS23535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23535
old locus tag: Nham_4621
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012779149.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MSNIHVSKGTPIVAGFFEKRTSSVQYVVADPETKKCAIIDPVLDFDPNSGATATHAADELLHFIKHENYTLQWVLDTHPHADHLSAAGYLKDKTGVPTAIGEKVVEVQKLWKEIYNYSDAFPTDGSQWDRLFRDGERFKIGDMDVEVLLTPGHTLASIAYLVGDAAFIHDTIFMPDGGTARADFPGGSARELWNSIQRVVELPDKTRLFTGHDYCPAGRKKPLWESTVAQQRAENIHLTKARTEQEFVALREKRDRELPMPKLILHSLQVNIRGGRLPETEKDGKRYLKLPLNALGDAPWNA
SIO_010081: NHAM_RS23535
subclass of: SO_0000673
so part of: NHAM_RS23535
location: complement(75255..76163)
location: region:75255-76163:-1
so has part: feature:75255-76163:-1:exon

WP_011505262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75255-76163:-1:exon

NHAM_RS23540
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23540
old locus tag: Nham_4622
so part of: sequence
location: complement(76176..76979)
location: region:76176-76979:-1
so has part: feature:76176-76979:-1:exon
subclass of: SO_0000010

position:76176:-1
position: 76176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76979:-1
position: 76979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76176-76979:-1:exon

NHAM_RS23540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23540
old locus tag: Nham_4622
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012114880.1
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfite exporter TauE/SafE family protein
translation: MMPGVSISLFAMGSGGIVGLVLGLVGGGGSILAVPLLVYVVGVKSPHVAIGTSAIAVSMSALGNLFAHSRAGNVKWRCAFAFAAAGVIGALAGSQAAKALDGQKLLALFGVVMIVVGSMMLRKRQSGENDDVHLTAESAKELLPLLLGIGFAVGVFSGFFGIGGGFLIVPGLILATGMPLTSAIGTSLVAITAFGAATAASYAWSGFVDWAVAALFVLGGLAGGVAGMRAGQVLAKSKRTLNIVFASLVIAVGVYVTVRGLTSLVAT
SIO_010081: NHAM_RS23540
subclass of: SO_0000673
so part of: NHAM_RS23540
location: complement(76176..76979)
location: region:76176-76979:-1
so has part: feature:76176-76979:-1:exon

WP_011505263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76176-76979:-1:exon

NHAM_RS23545
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23545
old locus tag: Nham_4623
so part of: sequence
location: complement(76976..77431)
location: region:76976-77431:-1
so has part: feature:76976-77431:-1:exon
subclass of: SO_0000010

position:76976:-1
position: 76976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77431:-1
position: 77431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76976-77431:-1:exon

NHAM_RS23545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23545
old locus tag: Nham_4623
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012752928.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane protein
translation: MQVLISLAAGLIFGLGLIISQMINPEKVLAFLDVAGDWDPSLAFVLAGAAAVSGLGYFFSRRRSAPLLAAQFDIPDRRDLDARLIIGAAFFGVGWGLVGLCPGPAIVALPLVGLQGVLFFAAMLIGMGAFTLLPSAVAPSSSHSPALDADA
SIO_010081: NHAM_RS23545
subclass of: SO_0000673
so part of: NHAM_RS23545
location: complement(76976..77431)
location: region:76976-77431:-1
so has part: feature:76976-77431:-1:exon

WP_011505264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76976-77431:-1:exon

NHAM_RS23550
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23550
old locus tag: Nham_4624
so part of: sequence
location: complement(77435..77860)
location: region:77435-77860:-1
so has part: feature:77435-77860:-1:exon
subclass of: SO_0000010

position:77435:-1
position: 77435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77860:-1
position: 77860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77435-77860:-1:exon

NHAM_RS23550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23550
old locus tag: Nham_4624
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012330134.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YeeE/YedE family protein
translation: MDNFTPFSALAGGSLIGLAAALLLLLNGRIAGVSGILGGIIGAIVPEATWRVAFIAGLVLSSVVYAASGATLPRISIDHSVGALIIAGLLVGFGTRLGSGCTSGHGVCGMARGSRRSLVATAVFMGTSILTVFVARHVIGG
SIO_010081: NHAM_RS23550
subclass of: SO_0000673
so part of: NHAM_RS23550
location: complement(77435..77860)
location: region:77435-77860:-1
so has part: feature:77435-77860:-1:exon

WP_011505265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77435-77860:-1:exon

NHAM_RS26025
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS26025
old locus tag: Nham_4625
so part of: sequence
location: 79116..79433
location: region:79116-79433:1
so has part: feature:79116-79433:1:exon
subclass of: SO_0000010

position:79116:1
position: 79116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79433:1
position: 79433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79116-79433:1:exon

NHAM_RS26025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS26025
old locus tag: Nham_4625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009800218.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNDPETRPSVGKDVSQDRRGSNPPPAPDNMGPSSNLGNPDPGYADQKTMNEQNPGQQQNRGERPRVQQEQDESVRKAEIKKAVEEDDPDNNPRGQEKTGFSGGT
SIO_010081: NHAM_RS26025
subclass of: SO_0000673
so part of: NHAM_RS26025
location: 79116..79433
location: region:79116-79433:1
so has part: feature:79116-79433:1:exon

WP_011505266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79116-79433:1:exon

NHAM_RS23560
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23560
old locus tag: Nham_4626
pseudo: true
so part of: sequence
location: complement(<79577..>80326)
location: region:79577-80326:-1
so has part: feature:79577-80326:-1:exon
subclass of: SO_0000010

position:79577:-1
position: 79577
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:80326:-1
position: 80326
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79577-80326:-1:exon

NHAM_RS23560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23560
old locus tag: Nham_4626
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015821561.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - DNA transposition [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: NHAM_RS23560
subclass of: SO_0000673
so part of: NHAM_RS23560
location: complement(<79577..>80326)
location: region:79577-80326:-1
so has part: feature:79577-80326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79577-80326:-1:exon

NHAM_RS27395
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS27395
old locus tag: Nham_4627
so part of: sequence
location: complement(80455..80715)
location: region:80455-80715:-1
so has part: feature:80455-80715:-1:exon
subclass of: SO_0000010

position:80455:-1
position: 80455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80715:-1
position: 80715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80455-80715:-1:exon

NHAM_RS27395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS27395
old locus tag: Nham_4627
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVTARIQGRSLDSVAGDVRTELDKAGFLPETVRYELGGVYKQQQIAFKGLLTKTPANAARGQSCKRRTLHRQRKPRCDCHPCQKR
SIO_010081: NHAM_RS27395
subclass of: SO_0000673
so part of: NHAM_RS27395
location: complement(80455..80715)
location: region:80455-80715:-1
so has part: feature:80455-80715:-1:exon

WP_157043871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80455-80715:-1:exon

NHAM_RS28780
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS28780
old locus tag: Nham_4628
pseudo: true
so part of: sequence
location: complement(<80773..80916)
location: region:80773-80916:-1
so has part: feature:80773-80916:-1:exon
subclass of: SO_0000010

position:80773:-1
position: 80773
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:80916:-1
position: 80916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80773-80916:-1:exon

NHAM_RS28780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS28780
old locus tag: Nham_4628
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011505029.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: uridine phosphorylase
SIO_010081: NHAM_RS28780
subclass of: SO_0000673
so part of: NHAM_RS28780
location: complement(<80773..80916)
location: region:80773-80916:-1
so has part: feature:80773-80916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80773-80916:-1:exon

NHAM_RS23565
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23565
old locus tag: Nham_4629
so part of: sequence
location: 80954..81574
location: region:80954-81574:1
so has part: feature:80954-81574:1:exon
subclass of: SO_0000010

position:80954:1
position: 80954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81574:1
position: 81574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80954-81574:1:exon

NHAM_RS23565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23565
old locus tag: Nham_4629
EC number: 2.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011505176.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MDEIDRQAHWENVYRTKREHEVSWFQENPAPSLDLIAHAGLSNEAEIIDIGGGASRLVDGLIDRRFRRVTVLDLSAVALAAAKTRLGPAGAEVEWVVADVTRWHPVRSYDLWHDRATFHFLTDPADREAYVACLKKAVRPGGHVVIGTFAPDGPERCSGLPIIRYDAETLASVFGAEFTLVDCRRHDHLTPGGNTQQFQFSVFQRN
SIO_010081: NHAM_RS23565
subclass of: SO_0000673
so part of: NHAM_RS23565
location: 80954..81574
location: region:80954-81574:1
so has part: feature:80954-81574:1:exon

WP_011505268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80954-81574:1:exon

NHAM_RS23570
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23570
old locus tag: Nham_4630
so part of: sequence
location: complement(81637..84042)
location: region:81637-84042:-1
so has part: feature:81637-84042:-1:exon
subclass of: SO_0000010

position:81637:-1
position: 81637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84042:-1
position: 84042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81637-84042:-1:exon

NHAM_RS23570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23570
old locus tag: Nham_4630
EC number: 7.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011505175.1
GO function: GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MTRSRNASSTGQPIHSSMATPEHHGDQAHGNHGHRPPAENGTVLDPVCGMTVDPATSKHRFDYHGRTYHFCSAGCRTKFAAAPATYLDKSKAAQPVPEGTIYTCPMHPEIRQIGPGSCPICGMALEPEVATLDAAPNPELADMTRRFWIGLVFALPAVVLEMGGHLVGGHGWVDQTLSNWIQLVSATPVVIWAGWPFFVRGWQSLVTRNLNMFTLIAMGTGVAYVYSLVATVVPQVFPPAFRGHDGAVAVYFEAAAVITVLVLLGQVLELRAREATSGAIKALLDLAPKTARLVAEDGTDHEVPLDGLNVGDRLRVRPGEKIPVDGVILEGRSSVDESLVTGESMPVTKENGAKVIAGTLNQSGSFVMQAEKVGRDTVLSQIVQMVAQAQRSRAPIQRLADQVAGWFVPTVIAAALVAFVVWALVGPEPRLAFGLVAAVSVLIIACPCALGLATPMSIMVGVGRGAQVGVLIKNAEALERMEKIDTLVVDKTGTLTEGKPKVVSIVTSPSFGEDDLLRFAASVERASEHPLADAIVRAAKERDLTLANVEEFDSPTGKGVTGKVEGKNILLGNVGYLQSLGVETRSMEPQAEALRGDGATVINIAVDGKLAGLFAIADPIKRSTPDALKALAADGIKVIMLTGDNRTTANAVAKRLGISEVEAEILPDQKSAVVSKLQKAGRIVAMAGDGVNDAPALAAAEVGIAMGTGTDVAMESAGITLLNGDLGGIVRARRLSEATMSNIRQNLFFAFIYNAAGIPIAAGVLYPVFGLLLSPIIAAAAMALSSVSVVGNALRLRMVKL
SIO_010081: NHAM_RS23570
subclass of: SO_0000673
so part of: NHAM_RS23570
location: complement(81637..84042)
location: region:81637-84042:-1
so has part: feature:81637-84042:-1:exon

WP_011505269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81637-84042:-1:exon

NHAM_RS23575
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23575
old locus tag: Nham_4631
so part of: sequence
location: 84128..84517
location: region:84128-84517:1
so has part: feature:84128-84517:1:exon
subclass of: SO_0000010

position:84128:1
position: 84128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84517:1
position: 84517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84128-84517:1:exon

NHAM_RS23575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23575
old locus tag: Nham_4631
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009337975.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFALPGSQATPYCLTDDDHVPGMIHVHHEGMMHIHKNGHAHHHSGVQTHADSSADHDAKSVALKSDVDPAKASHSADGKCCGLKSVTALPTPLVAVAQPSVPKAVRASDHYRKLTDNPPPQLYRPPIS
SIO_010081: NHAM_RS23575
subclass of: SO_0000673
so part of: NHAM_RS23575
location: 84128..84517
location: region:84128-84517:1
so has part: feature:84128-84517:1:exon

WP_245270140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84128-84517:1:exon

NHAM_RS23580
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23580
old locus tag: Nham_4632
so part of: sequence
location: 84597..84896
location: region:84597-84896:1
so has part: feature:84597-84896:1:exon
subclass of: SO_0000010

position:84597:1
position: 84597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84896:1
position: 84896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84597-84896:1:exon

NHAM_RS23580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23580
old locus tag: Nham_4632
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013912802.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAQLGATVAAVGSVVRGIFGRRLGTFAGMVVAAITLGGCALPPAPLAGPDPADPGARVAGVGYRSSIAPYTSFRPAAPSGWTEQNQRVTPSPTSGHEH
SIO_010081: NHAM_RS23580
subclass of: SO_0000673
so part of: NHAM_RS23580
location: 84597..84896
location: region:84597-84896:1
so has part: feature:84597-84896:1:exon

WP_041359793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84597-84896:1:exon

NHAM_RS23585
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23585
old locus tag: Nham_4633
so part of: sequence
location: 84906..86363
location: region:84906-86363:1
so has part: feature:84906-86363:1:exon
subclass of: SO_0000010

position:84906:1
position: 84906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86363:1
position: 86363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84906-86363:1:exon

NHAM_RS23585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23585
old locus tag: Nham_4633
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012564755.1
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TolC family protein
translation: MKIVRGAWLHQSLLRNSRSVLVLAGSLVLSGCATFSPDRGMGVVADIAGNTIRKDVIAIRSVDDAQRADDSVKRLLHRTLNVETAVQVALLNNRGLQASYNELALAEADRVQESLPPNPTFSVSRISGNGATEIERQVVGDILALATLPFRSEIAKQRFRQAQLRAALETLRLAADVRRDFYRAVAANELVALLSDAKATAESTAQLSKKLGETGSLNKLDQAREQVFYAETTADLASLRQEATSSREALARLLGLWDGDLNFKLPSHLPALPQRPRTLPRIEVDAVEHRIDLQVARIELDALAKSLNLTEASRFVTMLDIAGIDRKTRDPESTPFRERGFDIQFQIPIFDGGEVRVRQAAETYNQAFNRLTEKAVNVRSEARDAYRSYRSSYEIASQYQREVLPLRKIITEEMQLRLSSMQVDVFALLTEARQRIASLRAAIIAKRAFWFAQSDLQTAVNGGGSGEGQSKSPTTTARTGGNGGH
SIO_010081: NHAM_RS23585
subclass of: SO_0000673
so part of: NHAM_RS23585
location: 84906..86363
location: region:84906-86363:1
so has part: feature:84906-86363:1:exon

WP_011505272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84906-86363:1:exon

NHAM_RS23590
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23590
old locus tag: Nham_4634
so part of: sequence
location: 86375..87763
location: region:86375-87763:1
so has part: feature:86375-87763:1:exon
subclass of: SO_0000010

position:86375:1
position: 86375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87763:1
position: 87763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86375-87763:1:exon

NHAM_RS23590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23590
old locus tag: Nham_4634
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013912803.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper oxidase
translation: MLSRRGFLGTAALVSATAVSGRAQAANIPEAPMMDKATMQPPLHPSSGPDYRPVVTLNGWSLPWRMNGDWKEFHLVAEPVVREFAPGMKAFLWGYNGQAPGPTIEAVEGDKVRIFVTNKLPEHTTVHWHGMIVPNGMDGVGGLNQPHIKPGQTFVYEFEMRNSGTFMYHPHSDEMVQMAMGMMGMIVVHPRDATFRPVDRDFVFIMSTYDIDPGTYLPKVSEMTDFNMWTWNSRVFPGIDVLPVRLGDRVRVRMGNLSMTSHPIHLHGHHFAVTCTDGGWVPESAQWPETTVNVPVGAVRAFDVVADNPGDWAFHCHKSHHTMNAMGHNVANMIGVSPKDLAKAVGKLAPDAMAMGSRGMAMGEMEMPMPDNTLMMMTGTGPFGPIEMGGMFTVMKIREGLARDDYSDPGPYKYPEGTVAHLVDAPAGQAPRQTGSEKTGQPDAMKGMKGMKGMDMKGMKGM
SIO_010081: NHAM_RS23590
subclass of: SO_0000673
so part of: NHAM_RS23590
location: 86375..87763
location: region:86375-87763:1
so has part: feature:86375-87763:1:exon

WP_011505273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86375-87763:1:exon

NHAM_RS23595
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23595
old locus tag: Nham_4635
so part of: sequence
location: 87811..88110
location: region:87811-88110:1
so has part: feature:87811-88110:1:exon
subclass of: SO_0000010

position:87811:1
position: 87811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88110:1
position: 88110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87811-88110:1:exon

NHAM_RS23595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23595
old locus tag: Nham_4635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012564751.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper-binding protein
translation: MKPTNLASAVFVPSLFAPLAASAQAMAKGAVKKVDVAGAKITMTSGPIKNLDMEDDNMTTVFRVEDPAMRKQVKPGDKVQFETEKASAGFTIAKLQRAK
SIO_010081: NHAM_RS23595
subclass of: SO_0000673
so part of: NHAM_RS23595
location: 87811..88110
location: region:87811-88110:1
so has part: feature:87811-88110:1:exon

WP_011505274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87811-88110:1:exon

NHAM_RS23600
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23600
old locus tag: Nham_4636
pseudo: true
so part of: sequence
location: 88159..>88548
location: region:88159-88548:1
so has part: feature:88159-88548:1:exon
subclass of: SO_0000010

position:88159:1
position: 88159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88548:1
position: 88548
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88159-88548:1:exon

NHAM_RS23600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23600
old locus tag: Nham_4636
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002714853.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF4396 domain-containing protein
SIO_010081: NHAM_RS23600
subclass of: SO_0000673
so part of: NHAM_RS23600
location: 88159..>88548
location: region:88159-88548:1
so has part: feature:88159-88548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88159-88548:1:exon

NHAM_RS23605
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23605
old locus tag: Nham_4637
so part of: sequence
location: 88828..89445
location: region:88828-89445:1
so has part: feature:88828-89445:1:exon
subclass of: SO_0000010

position:88828:1
position: 88828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89445:1
position: 89445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88828-89445:1:exon

NHAM_RS23605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23605
old locus tag: Nham_4637
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011505169.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c
translation: MTKLVGAAILAVVIVLAGAGAFVFSGVYDVGADTPHWTLTRKIIEIVRDRAIAVRANDIQVPDLTGEQLILKGAGQYAAMCADCHLAPGKSESEIRPGLYPKPPKLSEHPIDPKTVFWVTKHGLKMSGMPAWGLGHDDETLWSIVAFVGKLPGMSAQQYKDIVAKAPPDEEMESMDRGDGHTHGGHQEHNADPSNEAGPKPRHHH
SIO_010081: NHAM_RS23605
subclass of: SO_0000673
so part of: NHAM_RS23605
location: 88828..89445
location: region:88828-89445:1
so has part: feature:88828-89445:1:exon

WP_011505276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88828-89445:1:exon

NHAM_RS26035
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS26035
old locus tag: Nham_4638
pseudo: true
so part of: sequence
location: 89872..>90141
location: region:89872-90141:1
so has part: feature:89872-90141:1:exon
subclass of: SO_0000010

position:89872:1
position: 89872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90141:1
position: 90141
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89872-90141:1:exon

NHAM_RS26035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS26035
old locus tag: Nham_4638
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611419.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: NHAM_RS26035
subclass of: SO_0000673
so part of: NHAM_RS26035
location: 89872..>90141
location: region:89872-90141:1
so has part: feature:89872-90141:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89872-90141:1:exon

NHAM_RS23610
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23610
old locus tag: Nham_4639
so part of: sequence
location: complement(90404..90907)
location: region:90404-90907:-1
so has part: feature:90404-90907:-1:exon
subclass of: SO_0000010

position:90404:-1
position: 90404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90907:-1
position: 90907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90404-90907:-1:exon

NHAM_RS23610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23610
old locus tag: Nham_4639
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011084500.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YhaV family toxin
translation: MSDDIVKINGWTIYAHPLFLDQLEAMIETVEKTRKKDPTKYKKKRGAKLLAAVLKVAFEDIPGDPTREIYRQGSTLGEDYKHWSRAKFLQQFRLFFRYQQSADAKIIVLAWVNDDSTLRAYESANDAYAVFRKMLDRGNPPDTWNKLLSAASSGESRRRLSRSTRGR
SIO_010081: NHAM_RS23610
subclass of: SO_0000673
so part of: NHAM_RS23610
location: complement(90404..90907)
location: region:90404-90907:-1
so has part: feature:90404-90907:-1:exon

WP_011505277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90404-90907:-1:exon

NHAM_RS23615
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23615
old locus tag: Nham_4640
so part of: sequence
location: complement(90904..91245)
location: region:90904-91245:-1
so has part: feature:90904-91245:-1:exon
subclass of: SO_0000010

position:90904:-1
position: 90904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91245:-1
position: 91245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90904-91245:-1:exon

NHAM_RS23615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23615
old locus tag: Nham_4640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015822454.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PrlF family antitoxin
translation: MAKTAEILEIPATITDRGQTTVPAAIRKMLALGKRDQVVFRGLADGTVMISKMEARADQNDPVIGKFLDFLARDMAKEPARIRPMSKSLLTRGKALVKGVKVDLDAALPVDEA
SIO_010081: NHAM_RS23615
subclass of: SO_0000673
so part of: NHAM_RS23615
location: complement(90904..91245)
location: region:90904-91245:-1
so has part: feature:90904-91245:-1:exon

WP_011505278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90904-91245:-1:exon

NHAM_RS23620
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23620
old locus tag: Nham_4641
so part of: sequence
location: complement(91708..92598)
location: region:91708-92598:-1
so has part: feature:91708-92598:-1:exon
subclass of: SO_0000010

position:91708:-1
position: 91708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92598:-1
position: 92598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91708-92598:-1:exon

NHAM_RS23620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23620
old locus tag: Nham_4641
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010414738.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltransferase domain-containing protein
translation: MAAAIEPRRVCRRPFGLSYAAMPDCSSMAQLAGPQGHVVGIDATPEQLAIARAHENWHRDRFGYPKSTVTFVEGDVSRLDELSFDNDSFDLIVSNCVINLIPDKAAVFAAAYRLLKKGGELYFSDIYSDRRVPAVLRANPILHGECLAGALYWGDFLNLAKSAGDPRLVSDRSLGINDLEIAELVGPVEFYSATYRLFKLDGLESACEDYGQAVRYRGTVPEAVHNFVLDKHHDIDAGRLFPVCGNTYRMLQESRLAPHFEFFGDTNRHYGIFKGCGTDLPFSREAQRAVAGGSCC
SIO_010081: NHAM_RS23620
subclass of: SO_0000673
so part of: NHAM_RS23620
location: complement(91708..92598)
location: region:91708-92598:-1
so has part: feature:91708-92598:-1:exon

WP_011505279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91708-92598:-1:exon

NHAM_RS26040
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS26040
old locus tag: Nham_4642
pseudo: true
so part of: sequence
location: complement(<92585..92755)
location: region:92585-92755:-1
so has part: feature:92585-92755:-1:exon
subclass of: SO_0000010

position:92585:-1
position: 92585
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:92755:-1
position: 92755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92585-92755:-1:exon

NHAM_RS26040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS26040
old locus tag: Nham_4642
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009338166.1
note: Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: S-methyl-5'-thioadenosine phosphorylase
SIO_010081: NHAM_RS26040
subclass of: SO_0000673
so part of: NHAM_RS26040
location: complement(<92585..92755)
location: region:92585-92755:-1
so has part: feature:92585-92755:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92585-92755:-1:exon

NHAM_RS23625
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23625
old locus tag: Nham_4643
so part of: sequence
location: complement(92795..93397)
location: region:92795-93397:-1
so has part: feature:92795-93397:-1:exon
subclass of: SO_0000010

position:92795:-1
position: 92795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93397:-1
position: 93397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92795-93397:-1:exon

NHAM_RS23625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23625
old locus tag: Nham_4643
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002718067.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TlpA disulfide reductase family protein
translation: MMWVHPFLRIATAVLVSVAATLSSATAHPESLDPPTLRNGISQFVLEEPLRPAPLMRLRGLDGRTLSMDKFYGKVVLLNFWASWCAPCVEEMPSLEALAASLPSDRFVVVAVSLDSGDGRQVKSFVKRHNLRHLTVVRDPNHEFGALTSEGKPEPTMPVYGYPTTYILDKRGLVTGFLVGPTTWDSPLARSFIDYFINLK
SIO_010081: NHAM_RS23625
subclass of: SO_0000673
so part of: NHAM_RS23625
location: complement(92795..93397)
location: region:92795-93397:-1
so has part: feature:92795-93397:-1:exon

WP_041359797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92795-93397:-1:exon

NHAM_RS23630
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23630
old locus tag: Nham_4644
so part of: sequence
location: complement(93394..94065)
location: region:93394-94065:-1
so has part: feature:93394-94065:-1:exon
subclass of: SO_0000010

position:93394:-1
position: 93394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94065:-1
position: 94065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93394-94065:-1:exon

NHAM_RS23630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23630
old locus tag: Nham_4644
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002718066.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1109 domain-containing protein
translation: MIATSDLIASLSAHATPVRRLRPPLVRACCWLSLAFLILVLLGVSHGLRPDFAKQLGDRAYVVGLVASLLTGVFATVAAFMLSLPDRSRLYALLPVPSLLVWMLTISVGCLTDWVAVGPEGMKMDEAASCFATLVLTSLPLSLALLVMLRYTASLRPATVIWMGSLAIGALTASALTLFHDIDATVMILMWNLGAAGLIVALGRIFGHRMLSWVAPKPLGRAP
SIO_010081: NHAM_RS23630
subclass of: SO_0000673
so part of: NHAM_RS23630
location: complement(93394..94065)
location: region:93394-94065:-1
so has part: feature:93394-94065:-1:exon

WP_011505281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93394-94065:-1:exon

NHAM_RS23635
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23635
old locus tag: Nham_4645
so part of: sequence
location: complement(94062..94697)
location: region:94062-94697:-1
so has part: feature:94062-94697:-1:exon
subclass of: SO_0000010

position:94062:-1
position: 94062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94697:-1
position: 94697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94062-94697:-1:exon

NHAM_RS23635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23635
old locus tag: Nham_4645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002718065.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MAPGRHKDNPTLRLVREGDTSRRAENASTKRDVEWSIYMARAQSGDQDAYSRLLTEITPYLRTLAGRHHRSPQDVEDTIQDILLTIHSIRQIYDPTRPFTPWLVAIGRRRIIDRLRRQGRSTVRETPLNEDHETIVEVEANIETRADGRSLREAVDKLPPGQREAITLLKLQEMSLKEAAERSGMSIAALKVATHRALKSLRTILGKDDNS
SIO_010081: NHAM_RS23635
subclass of: SO_0000673
so part of: NHAM_RS23635
location: complement(94062..94697)
location: region:94062-94697:-1
so has part: feature:94062-94697:-1:exon

WP_011505282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94062-94697:-1:exon

NHAM_RS23640
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23640
old locus tag: Nham_4646
so part of: sequence
location: 95274..95618
location: region:95274-95618:1
so has part: feature:95274-95618:1:exon
subclass of: SO_0000010

position:95274:1
position: 95274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95618:1
position: 95618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95274-95618:1:exon

NHAM_RS23640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23640
old locus tag: Nham_4646
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013742194.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2282 domain-containing protein
translation: MKATNPVLVASAFAFALGTFAASTAMAQDKPMMTKEQMMKKRAMTKETVKGGKMEMCFGVALKGQNDCYAGAGTTCAGTSTVDYQGNAFKLEPKGTCTTIKTPNGVGSLKPKSA
SIO_010081: NHAM_RS23640
subclass of: SO_0000673
so part of: NHAM_RS23640
location: 95274..95618
location: region:95274-95618:1
so has part: feature:95274-95618:1:exon

WP_011505283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95274-95618:1:exon

NHAM_RS23645
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23645
old locus tag: Nham_4647
so part of: sequence
location: 95686..96582
location: region:95686-96582:1
so has part: feature:95686-96582:1:exon
subclass of: SO_0000010

position:95686:1
position: 95686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96582:1
position: 96582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95686-96582:1:exon

NHAM_RS23645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23645
old locus tag: Nham_4647
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010451298.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF692 domain-containing protein
translation: MARAQAFSDRTAIPARAGVGLKAEHYQHILDHTPNIGFFEVHAENYMGAGGPPHRYLTQIRELYPLSLHGVGLSIGGTMPLDNEHLKRLSSLIARYQPGLFSEHLAWSTHESRFFNDLLPTPYTNETLSRVVEHIDQVQTVLGRQMLLENPSTYVWFEESTWSETDFITEIARRTGCGLLLDVNNVYVACTNQQWGTTAYIDSFPLRSVQEIHLAGHTRQVDDKGRPLLIDSHDKGVDELVWNLFRDVMKRIGPTPTPTLIEWDANIPTWSELQAEARMAEMLMDLSHAEERSYGAVG
SIO_010081: NHAM_RS23645
subclass of: SO_0000673
so part of: NHAM_RS23645
location: 95686..96582
location: region:95686-96582:1
so has part: feature:95686-96582:1:exon

WP_011505284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95686-96582:1:exon

NHAM_RS23650
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23650
old locus tag: Nham_4648
so part of: sequence
location: 96566..97372
location: region:96566-97372:1
so has part: feature:96566-97372:1:exon
subclass of: SO_0000010

position:96566:1
position: 96566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97372:1
position: 97372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96566-97372:1:exon

NHAM_RS23650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23650
old locus tag: Nham_4648
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002718062.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative DNA-binding domain-containing protein
translation: MALSVDRQKEFAAALLDPEQPAPTGVVGPDGDPCPKRFAVYRNNVVVGLIEILRAVYPAVRRLVGDEFFDAMAGVHVRIEPPRSPILVEYGGRFPAFIETFRLASSLPYLADVARIEWAWAEAYHARDACALTASSFSEVPIDQYPSLRLQLHPSVRVVRSAMPALTIWNMNVRDSDSGEVVFDGEGETALVARPDAVVQVRSLSPGAPDFIDAIGARHTVAKAAELAGECDGRFDLSSTIAGLIEAGALCAYQTHSGVRFEAKGVVR
SIO_010081: NHAM_RS23650
subclass of: SO_0000673
so part of: NHAM_RS23650
location: 96566..97372
location: region:96566-97372:1
so has part: feature:96566-97372:1:exon

WP_011505285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96566-97372:1:exon

NHAM_RS23655
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23655
old locus tag: Nham_4649
so part of: sequence
location: 97369..97893
location: region:97369-97893:1
so has part: feature:97369-97893:1:exon
subclass of: SO_0000010

position:97369:1
position: 97369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97893:1
position: 97893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97369-97893:1:exon

NHAM_RS23655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23655
old locus tag: Nham_4649
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002718061.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DoxX family protein
translation: MNVDTSHPRLSISSSRIGKIIETLASWLTVIGLAVAPPMLRIALAVPFFKSGLTRWDGFLSLSPSTEFLFSDMFKLHIFGNEYPFPMPDVVAHLVGMAEITLPILLVLGLGTRFVALALLVMTGIIQLTVPEGWANFHLPWASMALAIMALGPGRLSLDAVIAIVSKREFRKTK
SIO_010081: NHAM_RS23655
subclass of: SO_0000673
so part of: NHAM_RS23655
location: 97369..97893
location: region:97369-97893:1
so has part: feature:97369-97893:1:exon

WP_011505286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97369-97893:1:exon

NHAM_RS27840
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS27840
old locus tag: Nham_4650
so part of: sequence
location: 98015..98251
location: region:98015-98251:1
so has part: feature:98015-98251:1:exon
subclass of: SO_0000010

position:98015:1
position: 98015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98251:1
position: 98251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98015-98251:1:exon

NHAM_RS27840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS27840
old locus tag: Nham_4650
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRTVYLSRPVTTAGVPIPQFATWDAFNTWLEEQCCNRQRDRLRGENETIGGRLQRDLAVMRGHAFLTALANKMERTV
SIO_010081: NHAM_RS27840
subclass of: SO_0000673
so part of: NHAM_RS27840
location: 98015..98251
location: region:98015-98251:1
so has part: feature:98015-98251:1:exon

WP_198137080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98015-98251:1:exon

NHAM_RS23665
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23665
old locus tag: Nham_4651
pseudo: true
so part of: sequence
location: 98615..99680
location: region:98615-99680:1
so has part: feature:98615-99680:1:exon
subclass of: SO_0000010

position:98615:1
position: 98615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99680:1
position: 99680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98615-99680:1:exon

NHAM_RS23665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23665
old locus tag: Nham_4651
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611419.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: NHAM_RS23665
subclass of: SO_0000673
so part of: NHAM_RS23665
location: 98615..99680
location: region:98615-99680:1
so has part: feature:98615-99680:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98615-99680:1:exon

NHAM_RS23670
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23670
old locus tag: Nham_4652
so part of: sequence
location: 100368..100550
location: region:100368-100550:1
so has part: feature:100368-100550:1:exon
subclass of: SO_0000010

position:100368:1
position: 100368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100550:1
position: 100550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100368-100550:1:exon

NHAM_RS23670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23670
old locus tag: Nham_4652
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011993073.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYDLSLAQLNAFELARTLMVPVTLFEVDGEYGVMPSDELDDADLVVVHEYDPHQFGPAH
SIO_010081: NHAM_RS23670
subclass of: SO_0000673
so part of: NHAM_RS23670
location: 100368..100550
location: region:100368-100550:1
so has part: feature:100368-100550:1:exon

WP_011505287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100368-100550:1:exon

NHAM_RS23675
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23675
old locus tag: Nham_4653
so part of: sequence
location: 100782..101750
location: region:100782-101750:1
so has part: feature:100782-101750:1:exon
subclass of: SO_0000010

position:100782:1
position: 100782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101750:1
position: 101750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100782-101750:1:exon

NHAM_RS23675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23675
old locus tag: Nham_4653
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011993002.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3991 and toprim domain-containing protein
translation: MEKKDIEELKDRVLCAAVLEQAGFTIDIKESTRKAIKYRRVDDIIIVIHGGKGWFDALSDAKGDVFSLVEHLDGIGFAEVLKRVSDLVGFVPVEPVWIRRSRAQDRDLGIPDRWRARRIPWRGSATWRYLRDERDVAETVIRAAIAQDLLREGPRGSMWAAHVDDNGMVTGWEERGPQWRGFSTGGAKVLFRFGRADAPRICVTEAAIDAMSLAALECVRSNSLYLSTGGGWSPATEAAIRALLVRPGASLIAATDSNAQGDKYADRLMAAASETGCGFERLRPTEVDWNAELKAKERKDRERRGEEKWETRLPHARPSRQG
SIO_010081: NHAM_RS23675
subclass of: SO_0000673
so part of: NHAM_RS23675
location: 100782..101750
location: region:100782-101750:1
so has part: feature:100782-101750:1:exon

WP_011505288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100782-101750:1:exon

NHAM_RS23680
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23680
old locus tag: Nham_4654
so part of: sequence
location: 101892..102491
location: region:101892-102491:1
so has part: feature:101892-102491:1:exon
subclass of: SO_0000010

position:101892:1
position: 101892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102491:1
position: 102491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101892-102491:1:exon

NHAM_RS23680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23680
old locus tag: Nham_4654
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012564798.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1419 domain-containing protein
translation: MTLSPIRKVYQGIADRRQMFRMFDRHAQRAKRSSDDAALYRGKWFEIDQVGHDTMLAILPPLWIKAEMFALREFLTDSITSVFFSLTIDDRLRFFHAYCDLFDKGSPDRMRAAIVERESRPLKAMTREERLEHIWSSTHDDYRGYADDGWAEHLRGRRTVLVYGGQRGTMLKLLDQLTDAEISAKLPVHLRYLPDAIAA
SIO_010081: NHAM_RS23680
subclass of: SO_0000673
so part of: NHAM_RS23680
location: 101892..102491
location: region:101892-102491:1
so has part: feature:101892-102491:1:exon

WP_011505289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101892-102491:1:exon

NHAM_RS28785
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS28785
so part of: sequence
location: 102503..102826
location: region:102503-102826:1
so has part: feature:102503-102826:1:exon
subclass of: SO_0000010

position:102503:1
position: 102503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102826:1
position: 102826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102503-102826:1:exon

NHAM_RS28785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS28785
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADYHSPTVVQPNIPAADITPLERLILGLAFDAEDEEDGVYFHIWCGPSDIVTLSVDDLRAACDASRDHGESSIGKHVSALLARSDAEAGDDPPDDIDVDLTEGDCG
SIO_010081: NHAM_RS28785
subclass of: SO_0000673
so part of: NHAM_RS28785
location: 102503..102826
location: region:102503-102826:1
so has part: feature:102503-102826:1:exon

WP_245270141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102503-102826:1:exon

NHAM_RS28790
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS28790
so part of: sequence
location: 102833..102991
location: region:102833-102991:1
so has part: feature:102833-102991:1:exon
subclass of: SO_0000010

position:102833:1
position: 102833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102991:1
position: 102991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102833-102991:1:exon

NHAM_RS28790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS28790
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFQDIVRRSATIDEIVVTTFYICTKMRPDGFWRQRDAHHRQRHPLSLHCRRA
SIO_010081: NHAM_RS28790
subclass of: SO_0000673
so part of: NHAM_RS28790
location: 102833..102991
location: region:102833-102991:1
so has part: feature:102833-102991:1:exon

WP_245270142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102833-102991:1:exon

NHAM_RS23690
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23690
old locus tag: Nham_4656
so part of: sequence
location: 103222..108324
location: region:103222-108324:1
so has part: feature:103222-108324:1:exon
subclass of: SO_0000010

position:103222:1
position: 103222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108324:1
position: 108324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103222-108324:1:exon

NHAM_RS23690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23690
old locus tag: Nham_4656
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012564796.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lactate dehydrogenase
translation: MAHDDPFTLDLFGNTAVSSGLGLGVTAFAGDTFDPDDDDDPDPATPAPAIPVAAVARSAPSARRERGANFHLAGDRALAKSWKDRARDNIAAVRLAAAIEAEERPASLEEQKQLIRFTGFGASELANFVFRRLGEAAFRKGWEEIGEDLEDAVGDLDHASLARCTQYAHFTPEFIIRAIWRGLQRLGWRGGRVLEPGIGTGLFPALMPEGLRKTSHVTGIELDPVTARIAGLLQPRARIIRGDFARTELPASFDLAIGNPPFSDRTVRSDRAYRSRGLRLHDYFIARAIDLLKPGALAAFVTSSGTMDKADSSAREHIAKSADLIAAIRLPEGSFRASAGTDVVVDLLFFRKRKIAEPEGDLSWLDIEEVRPAIEDEAAIRVNRWLVQHPDFVLGTHALASGPFGEMYTCRPRRGESLGVALADAVNLLPEAIYGVEPDVIDPDLRDGDDQTGADLPSERHVREGSYFFDKARGLMQVLDGQPVAVKVRNGRSADGIPEKHVRIIKKLIPIRDAVRGVLKAQELDRPWKEAQVRLRIAWSNFVRDFGPINFTTVSTTEDEETGEVRETHRRPNIQSFLDDPDCWLVASIEDYDLETNTAKPGPIFTKRVISPPAPPVITSAADALAVVLNERARVDVDHIAELLHRDGQDVIAELGSAIFRDPADGSWQTADAYLSGHVRDKLRAAEAAAALDPSYQRNVTALQGVQPADLRPSDITARLGAPWIPAADIVAFVHETMGAEIKIHHMQELASWTVEARQLGWMAAGTSEWGTDRRHAGELLADALNSRVPQIFDTIKDVDSERRVLNVVDTEAAKTKLSKIKDEFQRWIWSDPDRTDRLARVYNDRFNNIAPRAFDGSHLKLPGASGAFSLYGHQKRGIWRIVAAGSTYLAHAVGAGKTMTFAAAIMEQRRLGLIAKAMLVVPGHCLAQAAREFLALYPSARILVADDTNFTKDKRQRFLSRAATATWDAIIITHSAFRFIGVPSAFEQQMIQDELELYETLLTKVESDDRVSRKRLERLKEGLKERLESLATRKDDLLTVSEIGVDQVIVDEAQEFRKLSFATNMSTLKGVDPNGSQRAWDLYVKSRFIETKNPGRALVLASGTPITNTLGEMFSVQRYLGYAALSERGLHEFDAWASTFGDVSTELELQPSGKYKPVTRFATFVNVPELIAMFRSFADVVTPEDLRQYVKVPAISTGKRQILTAKPTAAFKRYQVLLDERIKAIEERDRPPEPGDDILLSVITDGRHAAIDLRLVDADEDSEPHNKLNNLISNAIRIWQETAGNAYIRSDGKPFELPGAAQMIFSDLGTISVEKSRGFSAYRWIRDELVRMGVPASEIAFMQDYRKSEAKQRLFGDVRAGKVRFLIGSSDTMGTGVNAQLRLKALHHLDVPWLPSQIEQREGRIVRQGNQHDEVDIFAYATEGSLDATMWQNNERKARFITAALSGDTSIRRLEDLGEGQANQFAMAKAIASGDQRLMQKAGLEADIARLERLRAAHVDDQHAIRRQVRDAEREIEHATRRIVEIGQDIEQLSPTYGESFAMSVKGQRYVERKQAGRALMREILTLIQLQQQGETTIASIGGFDLEYSGERFGRDGYRYSTMLLRTGAEYEIELPVTVTPLGAVSRLEHALADFEGEQERYRQRLADARRRLVAYQSREGGDFAFAGELAGKRRQLAEIDKALASDIEGAGEARSIAA
SIO_010081: NHAM_RS23690
subclass of: SO_0000673
so part of: NHAM_RS23690
location: 103222..108324
location: region:103222-108324:1
so has part: feature:103222-108324:1:exon

WP_011505290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103222-108324:1:exon

NHAM_RS23695
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23695
old locus tag: Nham_4657
so part of: sequence
location: complement(108321..108749)
location: region:108321-108749:-1
so has part: feature:108321-108749:-1:exon
subclass of: SO_0000010

position:108321:-1
position: 108321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108749:-1
position: 108749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108321-108749:-1:exon

NHAM_RS23695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23695
old locus tag: Nham_4657
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015242556.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system MqsA family antitoxin
translation: MAASKMDVPNTMVSPETGETLRRGVRPLIVTYKGKSITVELPGYYPDNGDDGIHVGDDMAITDAALRILKEEIEGIPSPATIRRVREKLKLSQREAGGLLKVGENAFDKYERGLVEPSGPTSQLLRLLDQHPELLEDLRESA
SIO_010081: NHAM_RS23695
subclass of: SO_0000673
so part of: NHAM_RS23695
location: complement(108321..108749)
location: region:108321-108749:-1
so has part: feature:108321-108749:-1:exon

WP_011505291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108321-108749:-1:exon

NHAM_RS23700
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23700
old locus tag: Nham_4658
so part of: sequence
location: complement(108752..109057)
location: region:108752-109057:-1
so has part: feature:108752-109057:-1:exon
subclass of: SO_0000010

position:108752:-1
position: 108752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109057:-1
position: 109057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108752-109057:-1:exon

NHAM_RS23700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23700
old locus tag: Nham_4658
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015242555.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system MqsR family toxin
translation: MEKRRPTYDLEAIKTALGSAERLAITSSALRDAVALGFDRARVVQTIAGIERRMFYKSMTTFADHRVWQDVYHVPARGVTIYVKIQADVVTEFTVMSFKEQ
SIO_010081: NHAM_RS23700
subclass of: SO_0000673
so part of: NHAM_RS23700
location: complement(108752..109057)
location: region:108752-109057:-1
so has part: feature:108752-109057:-1:exon

WP_011505292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108752-109057:-1:exon

NHAM_RS23705
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23705
old locus tag: Nham_4659
so part of: sequence
location: 109403..111076
location: region:109403-111076:1
so has part: feature:109403-111076:1:exon
subclass of: SO_0000010

position:109403:1
position: 109403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111076:1
position: 111076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109403-111076:1:exon

NHAM_RS23705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23705
old locus tag: Nham_4659
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012564795.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MHLIKVDPRGLKENPDRLRQTKSAPQADALLLATIKAVGIVQPPVITSESGGGNGYIINSGHRRVKQAIAAGLKEIDVLVDETADDNGAMRSMIENIAREAMNPVDQWRAIERLVALGWTEEAIGVALALPVRQIRKLRLLANVLPVMLDHMAKGDMPNEQQLRTIAAASPDEQKEVWKKHKPSKADPQVSWWSVAQALQKTRMYARHANFGADLAQAYGIQWVEDLFAPADEDSRYTTDVEAFLGAQHEWMANNLPKKGIVAETTNYGEVKLPLKAERVYGKPTKSDCTAMYLDREGRVHTVHYRMPEAKKPKGKAASGSQSSAEDVGVISKARPDVTRKGVEMIGDYRTDALREALGRAPIEDDTLMALLILAFAGQNVSVTTGSGGVSYGHSRLAKHAAVLFDADGTLDFDRDTLRVAARAVLIDVFSCRENATNSGVVARVAGATIGADEFLPNMGTEDFLSCLSRPALEGSCKSTPVLPRQRVQDTRAALVEHFKDECFIHPAALFAPDAAKLAEWLASSTTDDADDAEDGLDGIADGSSGEDAEAFREAAE
SIO_010081: NHAM_RS23705
subclass of: SO_0000673
so part of: NHAM_RS23705
location: 109403..111076
location: region:109403-111076:1
so has part: feature:109403-111076:1:exon

WP_011505293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109403-111076:1:exon

NHAM_RS23710
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23710
old locus tag: Nham_4660
so part of: sequence
location: 111168..111644
location: region:111168-111644:1
so has part: feature:111168-111644:1:exon
subclass of: SO_0000010

position:111168:1
position: 111168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111644:1
position: 111644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111168-111644:1:exon

NHAM_RS23710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23710
old locus tag: Nham_4660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010974883.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAHTIFDNAPIGSTIAWSDRSPQPPARFKKKIAAWQTNNSSGRLIRKQGDRAVGNVSLSASFTLHEADYGAGGVIAIRVHRTFSLDSTLHFTILERPVIGSIRVFNQAGDGAELVYLVSNHADAQEWLTRHGYPSAVLEEVTADEVGADIVEGRTAA
SIO_010081: NHAM_RS23710
subclass of: SO_0000673
so part of: NHAM_RS23710
location: 111168..111644
location: region:111168-111644:1
so has part: feature:111168-111644:1:exon

WP_011505294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111168-111644:1:exon

NHAM_RS23715
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23715
old locus tag: Nham_4661
so part of: sequence
location: 111641..112510
location: region:111641-112510:1
so has part: feature:111641-112510:1:exon
subclass of: SO_0000010

position:111641:1
position: 111641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112510:1
position: 112510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111641-112510:1:exon

NHAM_RS23715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23715
old locus tag: Nham_4661
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012564793.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNALSPTRTDNEAPGFPGASFGRSADGLLVARVGETAFAMAPARDGRYFLVTAWRISRPMSEWTRADFYGCSGELADEDAFRARVAENAEHQRERKALGRVEVYSRAHTPWGASQGATVNAEGVVSHSTAGHGGFKLSAARNRQVHPMLRSKGGFYEEDAEWAIVAITFPHLFTSYERRCAERTVKDSWPDAWETIFGTILQPGESYEKDRRAFEATHAADWIVISAITSDRKKGFVECIATLGSQRGPGVEERRFLVPSAEYKVGRFGFVIDPDRHAIDDDFQRGTSS
SIO_010081: NHAM_RS23715
subclass of: SO_0000673
so part of: NHAM_RS23715
location: 111641..112510
location: region:111641-112510:1
so has part: feature:111641-112510:1:exon

WP_011505295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111641-112510:1:exon

NHAM_RS23720
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23720
old locus tag: Nham_4662
so part of: sequence
location: 112507..112920
location: region:112507-112920:1
so has part: feature:112507-112920:1:exon
subclass of: SO_0000010

position:112507:1
position: 112507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112920:1
position: 112920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112507-112920:1:exon

NHAM_RS23720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23720
old locus tag: Nham_4662
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011427430.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSASSDTVIRLSRMEEARRQIQRQLDMIDRQITRRMTAVIPQLKPQHTCYRRGRPPNPSAFLERYRANLAAITAERQPEIDALSRKLARQDAAIAAFCQRHGLTQGSLDSAAAASDAARDRAGVMAPSRSQRVCDHG
SIO_010081: NHAM_RS23720
subclass of: SO_0000673
so part of: NHAM_RS23720
location: 112507..112920
location: region:112507-112920:1
so has part: feature:112507-112920:1:exon

WP_011505296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112507-112920:1:exon

NHAM_RS23725
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23725
old locus tag: Nham_4663
pseudo: true
so part of: sequence
location: 112913..113213
location: region:112913-113213:1
so has part: feature:112913-113213:1:exon
subclass of: SO_0000010

position:112913:1
position: 112913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113213:1
position: 113213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112913-113213:1:exon

NHAM_RS23725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23725
old locus tag: Nham_4663
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011993085.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: NHAM_RS23725
subclass of: SO_0000673
so part of: NHAM_RS23725
location: 112913..113213
location: region:112913-113213:1
so has part: feature:112913-113213:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:112913-113213:1:exon

NHAM_RS23730
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23730
old locus tag: Nham_4664
so part of: sequence
location: 113605..114195
location: region:113605-114195:1
so has part: feature:113605-114195:1:exon
subclass of: SO_0000010

position:113605:1
position: 113605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114195:1
position: 114195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113605-114195:1:exon

NHAM_RS23730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23730
old locus tag: Nham_4664
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011993086.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKKPAAAPRQPAKVVHLRKGTTLEMVRFACPDTSQAARISESFGLAIIDTDGIRDLHERLIVETASSLNEGLGERAMQIHLQRIVGAYVGSAHGAGQFYSRAVTEARDATAKVANDVRDEDLDGPVGFDSAAQRKREFAADMALQSHALRMAAEGAVAAYEQVVGERWKPFERPLDNPGQTLDRKAAQVQMAAFG
SIO_010081: NHAM_RS23730
subclass of: SO_0000673
so part of: NHAM_RS23730
location: 113605..114195
location: region:113605-114195:1
so has part: feature:113605-114195:1:exon

WP_011505298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113605-114195:1:exon

NHAM_RS23735
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23735
old locus tag: Nham_4665
pseudo: true
so part of: sequence
location: complement(114272..>114631)
location: region:114272-114631:-1
so has part: feature:114272-114631:-1:exon
subclass of: SO_0000010

position:114272:-1
position: 114272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114631:-1
position: 114631
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114272-114631:-1:exon

NHAM_RS23735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23735
old locus tag: Nham_4665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015341881.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
SIO_010081: NHAM_RS23735
subclass of: SO_0000673
so part of: NHAM_RS23735
location: complement(114272..>114631)
location: region:114272-114631:-1
so has part: feature:114272-114631:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114272-114631:-1:exon

NHAM_RS23740
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23740
old locus tag: Nham_4666
so part of: sequence
location: 114944..115249
location: region:114944-115249:1
so has part: feature:114944-115249:1:exon
subclass of: SO_0000010

position:114944:1
position: 114944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115249:1
position: 115249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114944-115249:1:exon

NHAM_RS23740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23740
old locus tag: Nham_4666
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018494937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MAANALVQTRIDADVRDRASAVLEGLGLTVSDAVRILLTRTANEGALPLELVTNGEAHDAWFRAKVQEALEDTRPDVSDRQADAYFASRRAAARKKADAKS
SIO_010081: NHAM_RS23740
subclass of: SO_0000673
so part of: NHAM_RS23740
location: 114944..115249
location: region:114944-115249:1
so has part: feature:114944-115249:1:exon

WP_011505299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114944-115249:1:exon

NHAM_RS23745
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23745
old locus tag: Nham_4667
so part of: sequence
location: 115246..115557
location: region:115246-115557:1
so has part: feature:115246-115557:1:exon
subclass of: SO_0000010

position:115246:1
position: 115246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115557:1
position: 115557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115246-115557:1:exon

NHAM_RS23745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23745
old locus tag: Nham_4667
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013845238.1
GO function: GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MKLLWSAFALADRDGIFTHFEADNPRAAIVIDERIAAAVRLLVDFPESGRLGRLGRLGRVVGTRELVINDTPYIAAYIVTENAIRILRVLHGTQRWPDELPEG
SIO_010081: NHAM_RS23745
subclass of: SO_0000673
so part of: NHAM_RS23745
location: 115246..115557
location: region:115246-115557:1
so has part: feature:115246-115557:1:exon

WP_011505300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115246-115557:1:exon

NHAM_RS23750
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23750
old locus tag: Nham_4668
so part of: sequence
location: complement(115915..116307)
location: region:115915-116307:-1
so has part: feature:115915-116307:-1:exon
subclass of: SO_0000010

position:115915:-1
position: 115915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116307:-1
position: 116307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115915-116307:-1:exon

NHAM_RS23750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23750
old locus tag: Nham_4668
inference: COORDINATES: protein motif:HMM:NF014430.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - DNA transposition [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MSSKVDRRRDRRHPPLPQVEEAGRLCGSRSLNLFKRGKTYHGKIIKQGNKRLRWAFVEAAAPAGVTDPQLRAQYEHLKFRGANKARVAIARKLLTITFHILRDQRPYERRGLNGEEGASSTTSRPVLMIV
SIO_010081: NHAM_RS23750
subclass of: SO_0000673
so part of: NHAM_RS23750
location: complement(115915..116307)
location: region:115915-116307:-1
so has part: feature:115915-116307:-1:exon

WP_011505301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115915-116307:-1:exon

NHAM_RS23760
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23760
old locus tag: Nham_4669
so part of: sequence
location: 117229..117630
location: region:117229-117630:1
so has part: feature:117229-117630:1:exon
subclass of: SO_0000010

position:117229:1
position: 117229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117630:1
position: 117630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117229-117630:1:exon

NHAM_RS23760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23760
old locus tag: Nham_4669
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005859736.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MQNIVILAGNIGQDPESRNTQGGTRITHFTLATSRPRYEDGKVVRDKDGYRVQDTEWHRITCFNGLGKTVEQHCEKGMRVLVRGRIHYTKWPDQQGNDRYGCEIIAETIDFLSRAKQTENEDRGQSSDDEIPF
SIO_010081: NHAM_RS23760
subclass of: SO_0000673
so part of: NHAM_RS23760
location: 117229..117630
location: region:117229-117630:1
so has part: feature:117229-117630:1:exon

WP_041359805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117229-117630:1:exon

NHAM_RS23765
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23765
old locus tag: Nham_4670
so part of: sequence
location: complement(117712..117969)
location: region:117712-117969:-1
so has part: feature:117712-117969:-1:exon
subclass of: SO_0000010

position:117712:-1
position: 117712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117969:-1
position: 117969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117712-117969:-1:exon

NHAM_RS23765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23765
old locus tag: Nham_4670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011930898.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MPEFERHPLHLRRIDPARNMRRFYLLSIQPTLFGGVSLIRNWGRIGTNGQTMMQTFDDSTDAGDALGRLERAKRRRGYGDASAER
SIO_010081: NHAM_RS23765
subclass of: SO_0000673
so part of: NHAM_RS23765
location: complement(117712..117969)
location: region:117712-117969:-1
so has part: feature:117712-117969:-1:exon

WP_011505303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117712-117969:-1:exon

NHAM_RS23770
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23770
old locus tag: Nham_4671
so part of: sequence
location: complement(118053..118475)
location: region:118053-118475:-1
so has part: feature:118053-118475:-1:exon
subclass of: SO_0000010

position:118053:-1
position: 118053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118475:-1
position: 118475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118053-118475:-1:exon

NHAM_RS23770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23770
old locus tag: Nham_4671
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004119813.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thermonuclease family protein
translation: MYAANHYDVGAGRLLAVAAPKADMLTATFPFCGDGRRVTCVVDGDTFWLSRVKIRIADIDAPELSPPRCEAERIKGEAAKSRLRELLNAGPFSLTAGWRDEDRYGRKLRTVTRDGRSIGEILVAERLARRWDGARHPWCN
SIO_010081: NHAM_RS23770
subclass of: SO_0000673
so part of: NHAM_RS23770
location: complement(118053..118475)
location: region:118053-118475:-1
so has part: feature:118053-118475:-1:exon

WP_245270150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118053-118475:-1:exon

NHAM_RS23775
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: traG
locus tag: NHAM_RS23775
old locus tag: Nham_4672
so part of: sequence
location: complement(118888..120813)
location: region:118888-120813:-1
so has part: feature:118888-120813:-1:exon
subclass of: SO_0000010

position:118888:-1
position: 118888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120813:-1
position: 120813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118888-120813:-1:exon

NHAM_RS23775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: traG
locus tag: NHAM_RS23775
old locus tag: Nham_4672
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501747.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer system protein TraG
translation: MKARKIALAIAPAILMAVLCLATTGAESWLARFGTTPGGRMLLGRIGLALPYALPAAAAVIFLFAAAGANAIRAAGWGVVTGGCLVVVIAASREIARLHSFADAVPAGERLLAYADPSTIGGATIAALVAAFGLRVAMRGNAAFAAAAPRRIRGRRAIHGESDWMAMTEAARLFAEAGGIVVGERYRVDQDAVADRAFRADEADTWGAGGKSPLLCFDASFGSSHAIVFAGSGGFKTTSVTVPTALKWGGGLVVLDPSNEVAPMVLTHRRNAGRQAFVLDPRSPEGGFNVLDWVGQHGATKEEDIAAVASWIMTDNPRQGSARDDFFRASALQLLTALVADICLSGHTEKKDQHLRQVRANLSEPEPKLRQRLQAIYDNSASGFVKENVAPFIAMTPETFSGVYANAAKETHWLSYANYAALVSGSSFTTAELADGQTDIFINLDLKTLENHPGLARVIIGSLLNAIYNRNGEVSGHTLFLLDEVARLGYLRILETARDAGRKYGITLLMLYQSIGQMREAYGGRDATSKWFESASWISFSAINDPETADYISKRCGDTTVEADQLSRSSQMSGSSRTRSKQLARRPLIMPHEVLRMRTDEQIVFTAGNPPLRCGRAIWFRRRDMKACTGQDPYHRSEAVR
SIO_010081: NHAM_RS23775
subclass of: SO_0000673
so part of: NHAM_RS23775
location: complement(118888..120813)
location: region:118888-120813:-1
so has part: feature:118888-120813:-1:exon

WP_011505305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118888-120813:-1:exon

NHAM_RS23780
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
gene: traD
locus tag: NHAM_RS23780
old locus tag: Nham_4673
so part of: sequence
location: complement(120800..121015)
location: region:120800-121015:-1
so has part: feature:120800-121015:-1:exon
subclass of: SO_0000010

position:120800:-1
position: 120800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121015:-1
position: 121015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120800-121015:-1:exon

NHAM_RS23780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
gene: traD
locus tag: NHAM_RS23780
old locus tag: Nham_4673
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020046837.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system coupling protein TraD
translation: MRRSDSVEARKKDTREKIELGGLIAKAGLRYEKRALLLGLLIDAADRLRGNEAEHERLTAIGAKAFGHEGT
SIO_010081: NHAM_RS23780
subclass of: SO_0000673
so part of: NHAM_RS23780
location: complement(120800..121015)
location: region:120800-121015:-1
so has part: feature:120800-121015:-1:exon

WP_011505306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120800-121015:-1:exon

NHAM_RS23785
type: Gene
subclass of: SO_0000704
RO_0002162: 323097
locus tag: NHAM_RS23785
old locus tag: Nham_4674
so part of: sequence
location: complement(121020..121280)
location: region:121020-121280:-1
so has part: feature:121020-121280:-1:exon
subclass of: SO_0000010

position:121020:-1
position: 121020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121280:-1
position: 121280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121020-121280:-1:exon

NHAM_RS23785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 323097
locus tag: NHAM_RS23785
old locus tag: Nham_4674
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018458955.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraC family protein
translation: MKKPSRQIRDEIARLQEQLKQAETREAERIGRVALKAGLGEIEIEETMLLSAFEEVASRFRKSGGRTSKAATGVASGASAGAPQEG
SIO_010081: NHAM_RS23785
subclass of: SO_0000673
so part of: NHAM_RS23785
location: complement(121020..121280)
location: region:121020-121280:-1
so has part: feature:121020-121280:-1:exon

WP_011505307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121020-121280:-1:exon