Deinococcus radiophilus strain ATCC 27603 plasmid pRadio4, complete sequence.
type: Entry
definition: Deinococcus radiophilus strain ATCC 27603 plasmid pRadio4, complete sequence.
sequence version: NZ_CP086383.1
sequence date: 2022-12-06
sequence: sequence
division: CON
label: NZ_CP086383.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN22895843
keyword: RefSeq
source: Deinococcus radiophilus
organism: Deinococcus radiophilus
taxonomy: Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP086383.1.\nBacteria and source DNA available from ATCC 27603 - Carolina\nBiological Supply.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 11-SEP-2020\nAssembly Method :: Trycycler v. 0.3.2\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 800.0x\nSequencing Technology :: Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/06/2022 04:26:03\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,840\nCDSs (total) :: 2,779\nGenes (coding) :: 2,720\nCDSs (with protein) :: 2,720\nGenes (RNA) :: 61\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 3\nPseudo Genes (total) :: 59\nCDSs (without protein) :: 59\nPseudo Genes (ambiguous residues) :: 0 of 59\nPseudo Genes (frameshifted) :: 28 of 59\nPseudo Genes (incomplete) :: 30 of 59\nPseudo Genes (internal stop) :: 12 of 59\nPseudo Genes (multiple problems) :: 10 of 59\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 25952
topology: circular
so has quality: SO_0000988
location: 1..25952
location: region:1-25952:1
RO_0002162: 32062

NZ_CP086383
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN22895843
type: BioSample
SIO_000068: biosample

1
title: Single Nanopore flow cell sequencing of Deinococcus radiophilus hints at prophage related plasmids: An amateur research perspective
author: Lim, S.W.
author: Cocioba, S.
journal: Unpublished

2
title: Direct Submission
author: Lim, S.W.
author: Cocioba, S.
journal: Submitted (04-NOV-2021) Research, Binomica Labs, 4301 22nd St 3FL Studio 342, Long Island City, NY 11101, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25952:1
position: 25952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25952:1:source
so part of: sequence
organism: Deinococcus radiophilus
mol type: genomic DNA
strain: ATCC 27603
isolation source: 2 Mrad irradiated Bombay duck
host: Harpadon nehereus
culture collection: ATCC:27603
type material: type strain of Deinococcus radiophilus
plasmid: pRadio4
country: India: Mumbai
collection date: 1971
collected by: NF Lewis
identified by: NF Lewis

32062
type: Taxonomy
SIO_000068: taxonomy

LMT64_RS13280
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13280
old locus tag: LMT64_13275
so part of: sequence
location: complement(join(25678..25952,1..1246))
location: region:1-25952:-1
so has part: feature:1-1246:-1:exon
so has part: feature:25678-25952:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25952:-1
position: 25952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1246:-1:exon

position:1246:-1
position: 1246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25678-25952:-1:exon

position:25678:-1
position: 25678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMT64_RS13280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13280
old locus tag: LMT64_13275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASGTGALTANTADHEVPAELTFSFKSETATVTSPAALRAAYPRLTGPNMGPGSTGLRPASLQPLTTQPQAVTVPLPQVAIVEDVQYLMPDGTLSAPMDGIQYAVPNTGSGTPSLEDQGDHAPNQNTLRAQYACGTQQTTVYFNHIVDGVQMPIPKGTYIRASEQNSLTDSIQAEGWIGDNGAFTFPMQICDTGNWFSRDAPDLYFILETRNSTGLTETHGTFARRHWWRTGTWWNTSPAAMQGLNVTVRGTNAEAELARRVWQKVNDVSNWHAQAMANDYGRFSVDVLYPASDYLGVATSRAAYKQIQLVYAHGTNDSVLFHEYGHEVYYRQLFGSTLYESYNTATSATYPTCGGCIGHSLEKDIGPEAAMIEGWADFFEAVTTDNVPNAASEGIAYWVEYPDRYPSVPTGPGSELRVASFLYDLYDADLEGYYNEWDDDALKPAGGPQQRFRNVAQYANNLPVSAEFKQMWFQNIKPTLDPNSLSVVCGILRSATLGSIDPACP
SIO_010081: LMT64_RS13280
subclass of: SO_0000673
so part of: LMT64_RS13280
location: complement(join(25678..25952,1..1246))
location: region:1-25952:-1
so has part: feature:1-1246:-1:exon
so has part: feature:25678-25952:-1:exon

WP_229253577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1246:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25678-25952:-1:exon

LMT64_RS13285
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13285
old locus tag: LMT64_13280
so part of: sequence
location: 1858..2214
location: region:1858-2214:1
so has part: feature:1858-2214:1:exon
subclass of: SO_0000010

position:1858:1
position: 1858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2214:1
position: 2214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1858-2214:1:exon

LMT64_RS13285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13285
old locus tag: LMT64_13280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011583147.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MPDDSSAEKPIQWMGSSFEDLLVFPREAKRQAGYQLSRIQGGIDPTDWKPFPQLGAGVREIRIREEGNAYRVMYVAKFEEAIYVLHCFEKKTQATSKHDKQVATDRYKALIEKRRKQS
SIO_010081: LMT64_RS13285
subclass of: SO_0000673
so part of: LMT64_RS13285
location: 1858..2214
location: region:1858-2214:1
so has part: feature:1858-2214:1:exon

WP_126353416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1858-2214:1:exon

LMT64_RS13290
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13290
old locus tag: LMT64_13285
so part of: sequence
location: 2211..2543
location: region:2211-2543:1
so has part: feature:2211-2543:1:exon
subclass of: SO_0000010

position:2211:1
position: 2211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2543:1
position: 2543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2211-2543:1:exon

LMT64_RS13290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13290
old locus tag: LMT64_13285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013952323.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MTDTEIRHITPVGSNIFEDLGFEPAEAAQMKAQVQLEIDAAQSIKRQLMDEIAHWIEDNQLKQAEAAEVLNISRPRVSDVVNHKTTKFTIDALVAMLARTGKRVQVQVYT
SIO_010081: LMT64_RS13290
subclass of: SO_0000673
so part of: LMT64_RS13290
location: 2211..2543
location: region:2211-2543:1
so has part: feature:2211-2543:1:exon

WP_126353418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2211-2543:1:exon

LMT64_RS13295
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13295
old locus tag: LMT64_13290
so part of: sequence
location: 2598..3152
location: region:2598-3152:1
so has part: feature:2598-3152:1:exon
subclass of: SO_0000010

position:2598:1
position: 2598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3152:1
position: 3152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2598-3152:1:exon

LMT64_RS13295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13295
old locus tag: LMT64_13290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017878030.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MPSTIGYKRVSSYGQNEVRQLDGMTFDKVFTDKASGKDTQRPQLQALLEYVREGDTVTVHSLDRLGRNLLDLQGLVGQLTEKGITVHFVKENMTFKPGGQDSMSTLLFSIMGAFAQFERDLIRERQAEGIAQAKKRGVYKGRKPKLTASQIAELRELAAQGVKKPELAQRFGVSRKTVYEYLRG
SIO_010081: LMT64_RS13295
subclass of: SO_0000673
so part of: LMT64_RS13295
location: 2598..3152
location: region:2598-3152:1
so has part: feature:2598-3152:1:exon

WP_126353420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2598-3152:1:exon

LMT64_RS13300
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13300
old locus tag: LMT64_13295
so part of: sequence
location: 3410..3601
location: region:3410-3601:1
so has part: feature:3410-3601:1:exon
subclass of: SO_0000010

position:3410:1
position: 3410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3601:1
position: 3601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3410-3601:1:exon

LMT64_RS13300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13300
old locus tag: LMT64_13295
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQGGVGAQWTPEQTDVAFTTFEAPQVRYWREQDGQAQSLTLKSVAPSDWGEQRVVFSPDASVL
SIO_010081: LMT64_RS13300
subclass of: SO_0000673
so part of: LMT64_RS13300
location: 3410..3601
location: region:3410-3601:1
so has part: feature:3410-3601:1:exon

WP_229253578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3410-3601:1:exon

LMT64_RS13305
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13305
old locus tag: LMT64_13300
so part of: sequence
location: complement(3615..3992)
location: region:3615-3992:-1
so has part: feature:3615-3992:-1:exon
subclass of: SO_0000010

position:3615:-1
position: 3615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3992:-1
position: 3992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3615-3992:-1:exon

LMT64_RS13305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13305
old locus tag: LMT64_13300
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRLLNNVIGFLVWAFLMGVLLLPFLIGLTSRAVNDTLTARLAGKSVKVSTVLEWPRFLYTPDPDVHIVFSCVPSGQEIKQFKEVTMLPIELPDLERNVVTSANEIRVNGYQEQISLNAAEASVC
SIO_010081: LMT64_RS13305
subclass of: SO_0000673
so part of: LMT64_RS13305
location: complement(3615..3992)
location: region:3615-3992:-1
so has part: feature:3615-3992:-1:exon

WP_126353422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3615-3992:-1:exon

LMT64_RS13310
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13310
old locus tag: LMT64_13305
so part of: sequence
location: complement(4061..4843)
location: region:4061-4843:-1
so has part: feature:4061-4843:-1:exon
subclass of: SO_0000010

position:4061:-1
position: 4061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4843:-1
position: 4843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4061-4843:-1:exon

LMT64_RS13310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13310
old locus tag: LMT64_13305
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLERIVNPAYSAPFKVEAEILLQKLPADLGVSLPAGSRVIGSVVNRSSDSDFPSGVNVYFDTALTPEQTNEFLKRSLTAADWKTFPVPRPYGQGGFQGSDALGEINRYYRLNPPEILSFMTQVTAGVTQVTLVKNESNDIERQLRFSEDPYFNEATSLPKLTAPAGIAISLRGTGSSGNDVKQEATMTGDLSRKALFTHYAEQLRQAGWTPLNRAETATITSGLWSFKPAGKDREQIGQLIIREESAGQYRAVLGTQSFE
SIO_010081: LMT64_RS13310
subclass of: SO_0000673
so part of: LMT64_RS13310
location: complement(4061..4843)
location: region:4061-4843:-1
so has part: feature:4061-4843:-1:exon

WP_126353424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4061-4843:-1:exon

LMT64_RS13315
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13315
old locus tag: LMT64_13310
so part of: sequence
location: complement(5188..5592)
location: region:5188-5592:-1
so has part: feature:5188-5592:-1:exon
subclass of: SO_0000010

position:5188:-1
position: 5188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5592:-1
position: 5592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5188-5592:-1:exon

LMT64_RS13315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13315
old locus tag: LMT64_13310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017300409.1
GO function: GO:0016301 - kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system death-on-curing family toxin
translation: MTFSANWPMLEGLSREEVEALHDAQIERYGGSPGLRDPGLLESALAQPVQELFGQLRYPTVPAQAAAYLYYLSRAHAFVDANKRTSLSCALVWLALHDLRLRLSQQELFDLTLAVAQGQLSLEETIERFERAVW
SIO_010081: LMT64_RS13315
subclass of: SO_0000673
so part of: LMT64_RS13315
location: complement(5188..5592)
location: region:5188-5592:-1
so has part: feature:5188-5592:-1:exon

WP_013616057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5188-5592:-1:exon

LMT64_RS13320
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13320
old locus tag: LMT64_13315
so part of: sequence
location: complement(5561..5803)
location: region:5561-5803:-1
so has part: feature:5561-5803:-1:exon
subclass of: SO_0000010

position:5561:-1
position: 5561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5803:-1
position: 5803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5561-5803:-1:exon

LMT64_RS13320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13320
old locus tag: LMT64_13315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013616058.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MRKTLSRIGNSEALVITKEMKELTGIGSEVQIEIQGNAIIITPAQDVSRPETLARQQRFAQARDQVLSEYDDLFRQLADA
SIO_010081: LMT64_RS13320
subclass of: SO_0000673
so part of: LMT64_RS13320
location: complement(5561..5803)
location: region:5561-5803:-1
so has part: feature:5561-5803:-1:exon

WP_126353426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5561-5803:-1:exon

LMT64_RS13325
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13325
old locus tag: LMT64_13320
so part of: sequence
location: 5876..6436
location: region:5876-6436:1
so has part: feature:5876-6436:1:exon
subclass of: SO_0000010

position:5876:1
position: 5876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6436:1
position: 6436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5876-6436:1:exon

LMT64_RS13325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13325
old locus tag: LMT64_13320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013616059.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYARVSKGDQDSALQLKALEAAGVTRVFKEQASGGRWDRPELHRALEHLREGDVLVVWKLDRLSRSLKDLLTILEQIEGRGAGFRSLTENIDTTTPAGRMMMQMVGSFAEFERAMIRERTKAGLEQARAAGRIGGRRPKLTPAQQEEIREAVRSGRRSAADCARLFGVSQATVSRILAAKKIL
SIO_010081: LMT64_RS13325
subclass of: SO_0000673
so part of: LMT64_RS13325
location: 5876..6436
location: region:5876-6436:1
so has part: feature:5876-6436:1:exon

WP_126353428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5876-6436:1:exon

LMT64_RS13330
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13330
old locus tag: LMT64_13325
so part of: sequence
location: complement(6553..7233)
location: region:6553-7233:-1
so has part: feature:6553-7233:-1:exon
subclass of: SO_0000010

position:6553:-1
position: 6553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7233:-1
position: 7233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6553-7233:-1:exon

LMT64_RS13330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13330
old locus tag: LMT64_13325
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSALWADYFRLLDTLRESAVWRWDEDGQLLDDGQRKPPRFVAVIEDAASWQRLEALVQELAVVQERTKWPIQLFNESWGWGKVSVTSAVSSRRVPPGEWLSLGVSDAASTQAAEEVVARLVAEGHKARVRQVKAQDGESGGIQLEVLAAPGLSMRWGHGRAFTLRAWDTDGVMLHRKISVGAVVVRGVQQGIHLDQTPRKQRKDTARWVCRWDGKDYYQVGSVALL
SIO_010081: LMT64_RS13330
subclass of: SO_0000673
so part of: LMT64_RS13330
location: complement(6553..7233)
location: region:6553-7233:-1
so has part: feature:6553-7233:-1:exon

WP_126353430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6553-7233:-1:exon

LMT64_RS13335
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13335
old locus tag: LMT64_13330
so part of: sequence
location: 8756..9613
location: region:8756-9613:1
so has part: feature:8756-9613:1:exon
subclass of: SO_0000010

position:8756:1
position: 8756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9613:1
position: 9613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8756-9613:1:exon

LMT64_RS13335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13335
old locus tag: LMT64_13330
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLYTTKIDLSVAKQKKLHRSGQALLYDIAKRVRSGYSWWLIQEVAVSKVLRTVAVLSTKYGTERTSVQRAKDKAKDETAAVLFVWPVRNDPAGYTTKFRVLLLATEHLDGEIMFDARKKPLNVNLYSNRNAVFKLRGSLKDAKKPKLGYEWDWSLTAQSEQIMRERFMAQHANPAGLQKLLAAYKSLPMVSGYRRQLLEALKATKPAWKKSTTPAVSSYKLEVKNGTKPDLFSARYIPYIRGFPKLFNDPADTFETYLAANDKLQKEVRRVQLETVRSQHGGAEL
SIO_010081: LMT64_RS13335
subclass of: SO_0000673
so part of: LMT64_RS13335
location: 8756..9613
location: region:8756-9613:1
so has part: feature:8756-9613:1:exon

WP_126353432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8756-9613:1:exon

LMT64_RS13340
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13340
old locus tag: LMT64_13335
so part of: sequence
location: 9610..10125
location: region:9610-10125:1
so has part: feature:9610-10125:1:exon
subclass of: SO_0000010

position:9610:1
position: 9610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10125:1
position: 10125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9610-10125:1:exon

LMT64_RS13340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13340
old locus tag: LMT64_13335
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTKRKVAARIFSFRQDTHQEELIVTNKAELLAQVKQSSHGNPQALQLAKLAWTDERSDITIGSMRIACIGQMIRETWVSPSRPTEPKAETQTIEGEKVGTELQPKSQTEAELSNAEDQPQSQAQPKPSVAAPAAITNEIGDEPLIRADAQRSTPWQGTASAEAASDTSSS
SIO_010081: LMT64_RS13340
subclass of: SO_0000673
so part of: LMT64_RS13340
location: 9610..10125
location: region:9610-10125:1
so has part: feature:9610-10125:1:exon

WP_126353434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9610-10125:1:exon

LMT64_RS13345
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13345
old locus tag: LMT64_13340
so part of: sequence
location: complement(10315..11088)
location: region:10315-11088:-1
so has part: feature:10315-11088:-1:exon
subclass of: SO_0000010

position:10315:-1
position: 10315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11088:-1
position: 11088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10315-11088:-1:exon

LMT64_RS13345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13345
old locus tag: LMT64_13340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012695021.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS982 family transposase
translation: MAKYRLHHSLGRRHVIRHLYFWAKKHFSDQKICPHQKVTDAMLVALLLSRLVFKHPFPSIWWNILKEDRPGLPSYTQAYTRGIKLLPLLEHVASPAQPCTEVVVDSMPLPICRPKRTHLCQFPGAKWGFGTQGEFFGYKLHAWVTPGGQIVQYVIRPANLHDVTVSYELNLRWPEFEGPTIIGDKGYCCLGYVYPPKKNTRYDTGWRESRHPKIRKRIETVFSALVEAQIRSAQTKTLGSLKLRVVLAVLAHNLARP
SIO_010081: LMT64_RS13345
subclass of: SO_0000673
so part of: LMT64_RS13345
location: complement(10315..11088)
location: region:10315-11088:-1
so has part: feature:10315-11088:-1:exon

WP_189643886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10315-11088:-1:exon

LMT64_RS13350
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13350
old locus tag: LMT64_13345
so part of: sequence
location: 11672..12613
location: region:11672-12613:1
so has part: feature:11672-12613:1:exon
subclass of: SO_0000010

position:11672:1
position: 11672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12613:1
position: 12613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11672-12613:1:exon

LMT64_RS13350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13350
old locus tag: LMT64_13345
inference: COORDINATES: protein motif:HMM:NF015076.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MLTTTAARHVALHGFSHYRTDTPLWIPVLPVDMDGNDPIDLIMAGVRIPYPTWVVYNNANGHAWAMYALIDPIVCSPKSARIERYAALIRDGLCLVLGGDPNYTNTTARTPWHDGHTYYPVLHRRWELRELAALLPLDSVARRTASPRRPLDPTAGRNSGLFARLGDWARQEAREGRYGRLSYDQLHAVAAGLNSTLGDPLPAGEVRSTARSVWRWMQADWQGNRTATPNAGSTRSQIRSHHREQLNTQQARERIQAAQAKGAQTRGEATREAITQAVGQLVASGQRVTRQGLQQLTGISERTLSRHTDIWKR
SIO_010081: LMT64_RS13350
subclass of: SO_0000673
so part of: LMT64_RS13350
location: 11672..12613
location: region:11672-12613:1
so has part: feature:11672-12613:1:exon

WP_229253579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11672-12613:1:exon

LMT64_RS13355
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13355
old locus tag: LMT64_13350
so part of: sequence
location: 12882..15701
location: region:12882-15701:1
so has part: feature:12882-15701:1:exon
subclass of: SO_0000010

position:12882:1
position: 12882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15701:1
position: 15701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12882-15701:1:exon

LMT64_RS13355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13355
old locus tag: LMT64_13350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015078774.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-6 DNA methylase
translation: MLTWNEIRTRAAQFAERWQDAVKENAEAQTFWNEFLAVYGIDRRRVAAFERKVKGLPKGSGRGRIDLLWPGLFMAEHKSKGRDLDEATQQAIEYVEVLEEHERPQWVAVSDFGQVRLQEVATGEAHQFALEDLPREVERFAFLIGKQLRHQREADPVNVKAAQQMGKLHNLLEDSGYAGHHLELLLVRLLFLLFGDDTGLWDERGLFYDLLAEQTRSDGEDTGTVLGRLFQVLDTPREKRQANLPEHFAAFPYVNGELFRERIDLADFSPKMREMLLEACMLDWGAVSPAIFGSMFQAVMDETERRNLGAHYTSEANILKALRPLFLDDLHAELTAAGQNKVKLQSFLSKLPGIRVLDPACGSGNFLILAYRELRRLELEALSRLLTDRTGGLQAVTDINLLLKVNVGQFYGIEYDEFPAQIARVAMWLTDHQANIEASRKLGQNFVNLPLTQAAHIQHGDALETDWLQHLNLDEDLGLLSHLYIVGNPPFVGGKKMSKEQRAQVVREFEGVKDAGVLDYVAAWYVKAAKVMQTVTREYPNLLTATALVSTNSVTQGEQVAPLWGNVLEGYGQTITAAHKTFKWSNDAPGQAAVHCVIVQFQPTAQLTSAQRRLFTYASPTAAPLEVQATNLTPYLTDGPSVVVRKAQQPLRAGVPPIHFGNMPLDGGNLLLTEQERAELLEAEPAAEKFIKPLLDAQDFLNGATRYCLWLPEAQPAELAKLPMVRERIEKTKQWRLASVAPSTQKFAQTPALFRDRRLPERYLVIPGFSSERREYVPIGYLDSETVVNNKLYMVPDADLYTFGIMQSRLHMDWMRHVGGRLESRYSYTKDIVYNTFPWPDREALKPKQVQAVEEAAQAVLKARAKHVASTLAQMYDPNLMPADLRKAHNQLDRAVEALYGLKAGSTEAQRLSKLLELYQELVPTLESQTQSKKVRRKK
SIO_010081: LMT64_RS13355
subclass of: SO_0000673
so part of: LMT64_RS13355
location: 12882..15701
location: region:12882-15701:1
so has part: feature:12882-15701:1:exon

WP_126353618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12882-15701:1:exon

LMT64_RS13360
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13360
old locus tag: LMT64_13355
so part of: sequence
location: 15698..16147
location: region:15698-16147:1
so has part: feature:15698-16147:1:exon
subclass of: SO_0000010

position:15698:1
position: 15698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16147:1
position: 16147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15698-16147:1:exon

LMT64_RS13360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13360
old locus tag: LMT64_13355
inference: COORDINATES: protein motif:HMM:NF025056.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: toll/interleukin-1 receptor domain-containing protein
translation: MKIFISWSGDASKEMARILKEHIQLVLQNVRVWYSDEDIMAGEKGLSIIERELKESDFGISCITPDNQTSPWLNFEAGALSKNFENGRVIPIILGMKVIDMVNGPIKQFQVREMTEEGVLSVLESINLTTPQNEVKAVPDAPNFQGLDG
SIO_010081: LMT64_RS13360
subclass of: SO_0000673
so part of: LMT64_RS13360
location: 15698..16147
location: region:15698-16147:1
so has part: feature:15698-16147:1:exon

WP_126353616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15698-16147:1:exon

LMT64_RS13365
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13365
old locus tag: LMT64_13360
so part of: sequence
location: complement(16334..17008)
location: region:16334-17008:-1
so has part: feature:16334-17008:-1:exon
subclass of: SO_0000010

position:16334:-1
position: 16334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17008:-1
position: 17008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16334-17008:-1:exon

LMT64_RS13365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13365
old locus tag: LMT64_13360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012173261.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MSVIGYALWLYHRFPLSQRDVQELLHERGIHVSHETLRQWNIKFAPLLTEELRHREPRRGSRWHLDEVHVVVGGMKHWLWRAVDEQGAVLDVLLQEHRDTEAAKTFFTRLLDEYDVPEAIHTDKLWSYGAAIRELSVLHAVEHVQVVSSARCNNLVEQSHRPTRQQERKQVGFKRRRRTQEFLALHARTSNLHRHTRTTVPASQRRANQTSATRDWHEALRRAA
SIO_010081: LMT64_RS13365
subclass of: SO_0000673
so part of: LMT64_RS13365
location: complement(16334..17008)
location: region:16334-17008:-1
so has part: feature:16334-17008:-1:exon

WP_126353622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16334-17008:-1:exon

LMT64_RS13370
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13370
old locus tag: LMT64_13365
pseudo: true
so part of: sequence
location: complement(17153..18137)
location: region:17153-18137:-1
so has part: feature:17153-18137:-1:exon
subclass of: SO_0000010

position:17153:-1
position: 17153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18137:-1
position: 18137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17153-18137:-1:exon

LMT64_RS13370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13370
old locus tag: LMT64_13365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010886790.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS4 family transposase
SIO_010081: LMT64_RS13370
subclass of: SO_0000673
so part of: LMT64_RS13370
location: complement(17153..18137)
location: region:17153-18137:-1
so has part: feature:17153-18137:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17153-18137:-1:exon

LMT64_RS13375
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13375
old locus tag: LMT64_13370
so part of: sequence
location: complement(18445..18951)
location: region:18445-18951:-1
so has part: feature:18445-18951:-1:exon
subclass of: SO_0000010

position:18445:-1
position: 18445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18951:-1
position: 18951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18445-18951:-1:exon

LMT64_RS13375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13375
old locus tag: LMT64_13370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVRTIDKEQHQRLRVAIQQTIQALTTVESNLPLSVETLYQDIPHITDGLLDELYKILMSSETHAQALFPVSGVPPVLDSEERQALIEAAQIIERRGAELVALTLNSPNLTAQRQAGSQSDITEALKSILVSVCTLSDFTFPTYELIQGDPLGISFRVIVNGDLEHVIE
SIO_010081: LMT64_RS13375
subclass of: SO_0000673
so part of: LMT64_RS13375
location: complement(18445..18951)
location: region:18445-18951:-1
so has part: feature:18445-18951:-1:exon

WP_229253575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18445-18951:-1:exon

LMT64_RS13380
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13380
old locus tag: LMT64_13375
so part of: sequence
location: 19069..20142
location: region:19069-20142:1
so has part: feature:19069-20142:1:exon
subclass of: SO_0000010

position:19069:1
position: 19069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20142:1
position: 20142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19069-20142:1:exon

LMT64_RS13380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13380
old locus tag: LMT64_13375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013613827.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS4 family transposase
translation: MNHLNQPPQDSLFAALRPFFRIDQRRFTVLVALILAIIQQRSVVLNNLKTVIALPGSQETRYQRLLRFVQFLLPEAMYLKFALHMLGTDELTLILDRTNWKLGTKDVNILMLSAVWKGFSLPLMWRFLPHGGSSAQHIRKELMADFLRHCPHVRIDGLLADREFIGQDWFTFLSEHGIVPCIRLRSDTKMDGLPVHVFAKKMQVGEIRVWHSPMVVYGVRLRVLALKVSKTEMLYLAYQGRADQNLRKYALRWQCENLHAALKTRGFDLEATGLTQAERVSTLLMVIAISFIWCLQTGAVLLLEGSVETRKAMRQKAHGYASKSLFRLGLDELRDLLSHPSPENWSRLARLVPRFEG
SIO_010081: LMT64_RS13380
subclass of: SO_0000673
so part of: LMT64_RS13380
location: 19069..20142
location: region:19069-20142:1
so has part: feature:19069-20142:1:exon

WP_229253260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19069-20142:1:exon

LMT64_RS13385
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13385
old locus tag: LMT64_13380
so part of: sequence
location: 20120..20683
location: region:20120-20683:1
so has part: feature:20120-20683:1:exon
subclass of: SO_0000010

position:20120:1
position: 20120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20683:1
position: 20683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20120-20683:1:exon

LMT64_RS13385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13385
old locus tag: LMT64_13380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHVLRGSQSINSISQHQRDKSQIKIIHESLWPKISEKIGEISLNNGIESKRSIEEKIDEVLSYHTFGYGGYEELLREQHQLSLRMYDLLRVLSSDRLSDSSTVKSLLLSSVSMQVRAFLKPAKLKISNDNQQIILSYDARGAFHARQLVTKVPELEEAVARLLGDTYEIIVISNHETVWPATPLLD
SIO_010081: LMT64_RS13385
subclass of: SO_0000673
so part of: LMT64_RS13385
location: 20120..20683
location: region:20120-20683:1
so has part: feature:20120-20683:1:exon

WP_229253576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20120-20683:1:exon

LMT64_RS13390
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13390
old locus tag: LMT64_13385
so part of: sequence
location: complement(20758..21060)
location: region:20758-21060:-1
so has part: feature:20758-21060:-1:exon
subclass of: SO_0000010

position:20758:-1
position: 20758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21060:-1
position: 21060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20758-21060:-1:exon

LMT64_RS13390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13390
old locus tag: LMT64_13385
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAITRKPQRQVPVVETTEQPDEQAALEVIQRGGSVQGDQQQSPAQEAELTDPLKNVQLRLYQSTLDEIDTLRKEQAKGRRPASRHAWIIAAIEEKLGRER
SIO_010081: LMT64_RS13390
subclass of: SO_0000673
so part of: LMT64_RS13390
location: complement(20758..21060)
location: region:20758-21060:-1
so has part: feature:20758-21060:-1:exon

WP_126353666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20758-21060:-1:exon

LMT64_RS13395
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13395
old locus tag: LMT64_13390
so part of: sequence
location: complement(21060..21713)
location: region:21060-21713:-1
so has part: feature:21060-21713:-1:exon
subclass of: SO_0000010

position:21713:-1
position: 21713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21060-21713:-1:exon

LMT64_RS13395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13395
old locus tag: LMT64_13390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014935016.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIYVVGGIKGGSGKTTVATNLAVALALEGRDVLLVDADDQETATDFSAWRNERTEGNTGYTSVQLSGQAARQELQKLAGKFEDVVIDTGGRDTTSQRAALTVADLYLVPFNPRSFDVWTLEKVARLIQEIQTVNPKLRSFAFINRADPRGSDNQDAAEALSDSESLEFLDAPLGNRKAYANAAAQGLGVLELQPEDAKASAEFRRLLEQIKTLGGTQ
SIO_010081: LMT64_RS13395
subclass of: SO_0000673
so part of: LMT64_RS13395
location: complement(21060..21713)
location: region:21060-21713:-1
so has part: feature:21060-21713:-1:exon

WP_126353664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21060-21713:-1:exon

LMT64_RS13400
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13400
old locus tag: LMT64_13395
so part of: sequence
location: 21806..22153
location: region:21806-22153:1
so has part: feature:21806-22153:1:exon
subclass of: SO_0000010

position:21806:1
position: 21806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22153:1
position: 22153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21806-22153:1:exon

LMT64_RS13400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13400
old locus tag: LMT64_13395
inference: COORDINATES: protein motif:HMM:NF021431.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HigB family toxin
translation: MPPGHRARIISRPKLEEFKASHPEAAQALKNWEDTVTSLKFGTFSELQQQINTVDLVHGTFLVFNIMGGRYRLITGVYWPAPALYLKHFLTHKEYDVWTQEQRRAAAKKSNKRRN
SIO_010081: LMT64_RS13400
subclass of: SO_0000673
so part of: LMT64_RS13400
location: 21806..22153
location: region:21806-22153:1
so has part: feature:21806-22153:1:exon

WP_126353662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21806-22153:1:exon

LMT64_RS13405
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13405
old locus tag: LMT64_13400
so part of: sequence
location: 22155..22592
location: region:22155-22592:1
so has part: feature:22155-22592:1:exon
subclass of: SO_0000010

position:22155:1
position: 22155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22592:1
position: 22592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22155-22592:1:exon

LMT64_RS13405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13405
old locus tag: LMT64_13400
inference: COORDINATES: protein motif:HMM:NF013540.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTATNLDQLASVWSQVEALAPGLLHPIETEEQYQQALETVDELMTRVNESEGDDPLESLLSILIERVAAYEESILPPREKNPAGVLAYLMEDRGLTQSALAVETGIDQSTISKLLAEERRFNADHARILGAYFKVGVQAFIPEID
SIO_010081: LMT64_RS13405
subclass of: SO_0000673
so part of: LMT64_RS13405
location: 22155..22592
location: region:22155-22592:1
so has part: feature:22155-22592:1:exon

WP_170166075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22155-22592:1:exon

LMT64_RS13410
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13410
old locus tag: LMT64_13405
so part of: sequence
location: complement(22810..23130)
location: region:22810-23130:-1
so has part: feature:22810-23130:-1:exon
subclass of: SO_0000010

position:22810:-1
position: 22810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23130:-1
position: 23130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22810-23130:-1:exon

LMT64_RS13410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13410
old locus tag: LMT64_13405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015231498.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MKAKSWKAVRQAAVDAGHFEEAEIGAIKEQLLAEVRAYKLAEVRAAAGLSQQELAEQLQVSQSRISRIEHGDLDRTELATLRKFARAIGGELELTLKLGDERFTLG
SIO_010081: LMT64_RS13410
subclass of: SO_0000673
so part of: LMT64_RS13410
location: complement(22810..23130)
location: region:22810-23130:-1
so has part: feature:22810-23130:-1:exon

WP_211334214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22810-23130:-1:exon

LMT64_RS13415
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13415
old locus tag: LMT64_13410
so part of: sequence
location: complement(23127..23489)
location: region:23127-23489:-1
so has part: feature:23127-23489:-1:exon
subclass of: SO_0000010

position:23127:-1
position: 23127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23489:-1
position: 23489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23127-23489:-1:exon

LMT64_RS13415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13415
old locus tag: LMT64_13410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017871100.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MAWEIILLDEVSEWFSDLDPVTEKLVTAALDLLEERGPMLGRPLVDTLTGTALPNLKELRPGSDGQTEIRILFVFDPKRQAILLTAGDKAGQWTDWYDENIPLAEQRYALWLDGHYEEEL
SIO_010081: LMT64_RS13415
subclass of: SO_0000673
so part of: LMT64_RS13415
location: complement(23127..23489)
location: region:23127-23489:-1
so has part: feature:23127-23489:-1:exon

WP_126353658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23127-23489:-1:exon

LMT64_RS13420
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13420
old locus tag: LMT64_13415
so part of: sequence
location: 23791..24774
location: region:23791-24774:1
so has part: feature:23791-24774:1:exon
subclass of: SO_0000010

position:23791:1
position: 23791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24774:1
position: 24774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23791-24774:1:exon

LMT64_RS13420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13420
old locus tag: LMT64_13415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010886790.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS4 family transposase
translation: MIAARSINHHDLSPHMPGISTPQAKKRRADRTFRDEQLDMDFFIALLVVHLPPGKVLLSLDRTNWEHGETPINFLVLGAVVHGFTLPLIWVPLDESGNSHTYARMWLVLKLLRVLPAKRWQGLVADREFIGAEWFRFLRRQGIKRAIRIRHSDMLDDTNGKEWFKHVQHGHFHEIDEKVFVFGELMRVVATRSSTGDLVIIATDFSARKTWKLYKQRWSIECTFSSFKMRGFDLERTGMTERSRLQRLFGLVTLAWVFCLRLGVWLGQTQPIPVLKHGRRAVSLVRHGAQHLVDALRWKPKQFMAVLDLLTQPFCPPGAPLDEVVTY
SIO_010081: LMT64_RS13420
subclass of: SO_0000673
so part of: LMT64_RS13420
location: 23791..24774
location: region:23791-24774:1
so has part: feature:23791-24774:1:exon

WP_126353712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23791-24774:1:exon

LMT64_RS13425
type: Gene
subclass of: SO_0000704
RO_0002162: 32062
locus tag: LMT64_RS13425
old locus tag: LMT64_13420
pseudo: true
so part of: sequence
location: <24778..24939
location: region:24778-24939:1
so has part: feature:24778-24939:1:exon
subclass of: SO_0000010

position:24778:1
position: 24778
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:24939:1
position: 24939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24778-24939:1:exon

LMT64_RS13425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 32062
locus tag: LMT64_RS13425
old locus tag: LMT64_13420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013623029.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: LMT64_RS13425
subclass of: SO_0000673
so part of: LMT64_RS13425
location: <24778..24939
location: region:24778-24939:1
so has part: feature:24778-24939:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24778-24939:1:exon