Aliivibrio salmonicida LFI1238 plasmid pVSAL320, complete sequence.
type: Entry
definition: Aliivibrio salmonicida LFI1238 plasmid pVSAL320, complete sequence.
sequence version: NC_011314.1
sequence date: 2022-12-24
sequence: sequence
division: CON
label: NC_011314.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA1705917
keyword: RefSeq
keyword: complete genome
source: Aliivibrio salmonicida LFI1238
organism: Aliivibrio salmonicida LFI1238
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio.
reference: 1
references: 19099551
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nFM178382.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/24/2022 02:13:44\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,501\nCDSs (total) :: 4,356\nGenes (coding) :: 4,112\nCDSs (with protein) :: 4,112\nGenes (RNA) :: 145\nrRNAs :: 13, 12, 12 (5S, 16S, 23S)\ncomplete rRNAs :: 13, 12, 12 (5S, 16S, 23S)\ntRNAs :: 104\nncRNAs :: 4\nPseudo Genes (total) :: 244\nCDSs (without protein) :: 244\nPseudo Genes (ambiguous residues) :: 0 of 244\nPseudo Genes (frameshifted) :: 101 of 244\nPseudo Genes (incomplete) :: 124 of 244\nPseudo Genes (internal stop) :: 38 of 244\nPseudo Genes (multiple problems) :: 17 of 244\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 30807
topology: circular
so has quality: SO_0000988
location: 1..30807
location: region:1-30807:1
RO_0002162: 316275

NC_011314
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA1705917
type: BioSample
SIO_000068: biosample

1
title: The genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238 shows extensive evidence of gene decay
author: Hjerde, E.
author: Lorentzen, M.S.
author: Holden, M.T.
author: Seeger, K.
author: Paulsen, S.
author: Bason, N.
author: Churcher, C.
author: Harris, D.
author: Norbertczak, H.
author: Quail, M.A.
author: Sanders, S.
author: Thurston, S.
author: Parkhill, J.
author: Willassen, N.P.
author: Thomson, N.R.
journal: BMC Genomics 9, 616 (2008)
pubmed: 19099551
comments: Publication Status: Online-Only

19099551
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Hjerde, E.
journal: Submitted (26-JUN-2008) Hjerde E., Department of Molecular Biotechnology, University of Tromso, Breivika, 9037 Tromso, NORWAY

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30807:1
position: 30807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-30807:1:source
so part of: sequence
organism: Aliivibrio salmonicida LFI1238
mol type: genomic DNA
strain: LFI1238
isolation source: Atlantic cod
plasmid: pVSAL320
country: Norway:Hammerfest

316275
type: Taxonomy
SIO_000068: taxonomy

VSAL_RS22100
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22100
old locus tag: pVSAL320_02
old locus tag: VSAL_p320_02
so part of: sequence
location: complement(417..1130)
location: region:417-1130:-1
so has part: feature:417-1130:-1:exon
subclass of: SO_0000010

position:417:-1
position: 417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130:-1
position: 1130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417-1130:-1:exon

VSAL_RS22100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22100
old locus tag: pVSAL320_02
old locus tag: VSAL_p320_02
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017021999.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: leucine-rich repeat domain-containing protein
translation: MKKNQPLTKLTLFVISILTTCVANASIELTLDDVKFDKNTGTILGYVSSYTDIIIPEQFQHISVTSIGDSAFSFHHLKKVIIPNSVKIIHDSAFTQNELTSVTIPDSVITIGNSVFSYNQLTRVKVPDLVTTIGNRTFANNKLTSVDIPNSVITIDDSAFFYNKLTHVIIPNSVTTIGNKAFFNNQLTNITIPNSLINIGNNAFHANKLITVSIPNSMTTTAHNLFDEEVIITRASL
SIO_010081: VSAL_RS22100
subclass of: SO_0000673
so part of: VSAL_RS22100
location: complement(417..1130)
location: region:417-1130:-1
so has part: feature:417-1130:-1:exon

WP_012552307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417-1130:-1:exon

VSAL_RS22105
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22105
old locus tag: pVSAL320_03
old locus tag: VSAL_p320_03
so part of: sequence
location: 1404..2033
location: region:1404-2033:1
so has part: feature:1404-2033:1:exon
subclass of: SO_0000010

position:1404:1
position: 1404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2033:1
position: 2033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1404-2033:1:exon

VSAL_RS22105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22105
old locus tag: pVSAL320_03
old locus tag: VSAL_p320_03
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012548882.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MYIFGYLRASTKEQDAKRAQDSLKSFAEDKGARIAGWYIENVSGASLQRPELMRLLKDAEKGDAILIEQVDRLSRLNDEDWETLKALINKKQLKVISLDLPTSHTVLMKHHNDDFTSAMFRAINNMMLDMLAAIARKDYQDRRRRQEQGIERAKVEGFYRGRRPDLDMHEKIIQLRVHNQLSVNATAKLVGVTARTVIRIVKIYNEDRV
SIO_010081: VSAL_RS22105
subclass of: SO_0000673
so part of: VSAL_RS22105
location: 1404..2033
location: region:1404-2033:1
so has part: feature:1404-2033:1:exon

WP_012552308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1404-2033:1:exon

VSAL_RS22110
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22110
old locus tag: pVSAL320_04
old locus tag: VSAL_p320_04
so part of: sequence
location: complement(2052..2363)
location: region:2052-2363:-1
so has part: feature:2052-2363:-1:exon
subclass of: SO_0000010

position:2052:-1
position: 2052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2363:-1
position: 2363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2052-2363:-1:exon

VSAL_RS22110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22110
old locus tag: pVSAL320_04
old locus tag: VSAL_p320_04
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006712136.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFDISDLTIKELIELNDRITERLRELESLKNSVLMDNFRLGDPVFFIPPNGSKVCGIVIKKNQKTISVLDDSGNSWNVPPMHLVSQGTENVFDVDWEKNVKSK
SIO_010081: VSAL_RS22110
subclass of: SO_0000673
so part of: VSAL_RS22110
location: complement(2052..2363)
location: region:2052-2363:-1
so has part: feature:2052-2363:-1:exon

WP_012552309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2052-2363:-1:exon

VSAL_RS22115
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22115
old locus tag: pVSAL320_05
old locus tag: VSAL_p320_05
so part of: sequence
location: complement(2356..2643)
location: region:2356-2643:-1
so has part: feature:2356-2643:-1:exon
subclass of: SO_0000010

position:2356:-1
position: 2356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2643:-1
position: 2643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2356-2643:-1:exon

VSAL_RS22115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22115
old locus tag: pVSAL320_05
old locus tag: VSAL_p320_05
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017023173.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF413 domain-containing protein
translation: MRKSIRFYDDVHFPKGFNRKGFTIKEAAVLDNYGLTMKGLLDGSLMPDSDEEKLFLLGVKNEDKSVSLFVQCWLKYSDLITKKPKLHTLCGNPYV
SIO_010081: VSAL_RS22115
subclass of: SO_0000673
so part of: VSAL_RS22115
location: complement(2356..2643)
location: region:2356-2643:-1
so has part: feature:2356-2643:-1:exon

WP_012552310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2356-2643:-1:exon

VSAL_RS22120
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22120
so part of: sequence
location: complement(2754..2951)
location: region:2754-2951:-1
so has part: feature:2754-2951:-1:exon
subclass of: SO_0000010

position:2754:-1
position: 2754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2951:-1
position: 2951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2754-2951:-1:exon

VSAL_RS22120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011263968.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSHSVMHKIADIADLASKESGTSYEEYIRLFSISFDKEFKQYRPINEVKRFAREYGYATKSERN
SIO_010081: VSAL_RS22120
subclass of: SO_0000673
so part of: VSAL_RS22120
location: complement(2754..2951)
location: region:2754-2951:-1
so has part: feature:2754-2951:-1:exon

WP_044583701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2754-2951:-1:exon

VSAL_RS22125
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22125
old locus tag: pVSAL320_06
old locus tag: VSAL_p320_06
so part of: sequence
location: complement(2975..3964)
location: region:2975-3964:-1
so has part: feature:2975-3964:-1:exon
subclass of: SO_0000010

position:2975:-1
position: 2975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3964:-1
position: 3964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2975-3964:-1:exon

VSAL_RS22125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22125
old locus tag: pVSAL320_06
old locus tag: VSAL_p320_06
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011263969.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane protein
translation: MNSTILKPICIVLSIATASLSAILTAQFMYGIGLAMGELILMTALGIVLDLAKCATPLFVLFLFSQKQYASALFALVLSMTLSVVSFSASVAALEQGVVASQKNSTAYQAVSQQIKEYTTQVDELRLLAAKQQNANLITKSERTLEKIEPLLVRIDDLYQRQSTLPSELTVFDKFGLLISYITSAALELMSWLLVLVSNALKRSHTHSNAVVRSHDKSSALELIQPDFIQTQLEIEPQSCAVNDEYFNDCVSEPVDCHEEEVFSDDHLKCNEQVYLEIKQAVLAKEVKPSQRGIGERFKGVGRDTINFVLMDLKHAGFLRSYRKGYAFA
SIO_010081: VSAL_RS22125
subclass of: SO_0000673
so part of: VSAL_RS22125
location: complement(2975..3964)
location: region:2975-3964:-1
so has part: feature:2975-3964:-1:exon

WP_012552311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2975-3964:-1:exon

VSAL_RS22130
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22130
old locus tag: pVSAL320_07
old locus tag: VSAL_p320_07
so part of: sequence
location: complement(4063..4287)
location: region:4063-4287:-1
so has part: feature:4063-4287:-1:exon
subclass of: SO_0000010

position:4063:-1
position: 4063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4287:-1
position: 4287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4063-4287:-1:exon

VSAL_RS22130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22130
old locus tag: pVSAL320_07
old locus tag: VSAL_p320_07
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNNKVKIAPPSGKPTLVTDMPASSKASSGEETKNIQFKVTPEKHNEIKSYAAERGLSLKELFLSFYENERMKE
SIO_010081: VSAL_RS22130
subclass of: SO_0000673
so part of: VSAL_RS22130
location: complement(4063..4287)
location: region:4063-4287:-1
so has part: feature:4063-4287:-1:exon

WP_044583702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4063-4287:-1:exon

VSAL_RS22135
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22135
old locus tag: pVSAL320_08
old locus tag: VSAL_p320_08
so part of: sequence
location: complement(4334..4954)
location: region:4334-4954:-1
so has part: feature:4334-4954:-1:exon
subclass of: SO_0000010

position:4334:-1
position: 4334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4954:-1
position: 4954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4334-4954:-1:exon

VSAL_RS22135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22135
old locus tag: pVSAL320_08
old locus tag: VSAL_p320_08
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIISFLSQKGGVTKSTLARSIAVAFADNSWTVHIADMDWQQQTSCKWSARRDQKEIQPTITTSAHRRVESALKCEKSYNLLVIDGRPAADRDSIVIAKASSLIVLPTGTSLDDLEPQLHLANDLKMNGIPVDKIIFLINKSPTDSETNNAVETIKAWGFNVCQTAIPFKAGYSSAQDQGLSITETRYPSLNKLTSKAIQEIVDLMI
SIO_010081: VSAL_RS22135
subclass of: SO_0000673
so part of: VSAL_RS22135
location: complement(4334..4954)
location: region:4334-4954:-1
so has part: feature:4334-4954:-1:exon

WP_044583703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4334-4954:-1:exon

VSAL_RS22140
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22140
old locus tag: pVSAL320_09
old locus tag: VSAL_p320_09
so part of: sequence
location: 5190..5381
location: region:5190-5381:1
so has part: feature:5190-5381:1:exon
subclass of: SO_0000010

position:5190:1
position: 5190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5381:1
position: 5381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5190-5381:1:exon

VSAL_RS22140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22140
old locus tag: pVSAL320_09
old locus tag: VSAL_p320_09
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012548881.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVFKINYLNNEKTLLCSETILMKGLPAAKRSSSSMGTVKIEIYDIAENLLTSKELGKWTVAE
SIO_010081: VSAL_RS22140
subclass of: SO_0000673
so part of: VSAL_RS22140
location: 5190..5381
location: region:5190-5381:1
so has part: feature:5190-5381:1:exon

WP_012552314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5190-5381:1:exon

VSAL_RS22145
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22145
old locus tag: VSAL_p320_10
so part of: sequence
location: complement(5398..5991)
location: region:5398-5991:-1
so has part: feature:5398-5991:-1:exon
subclass of: SO_0000010

position:5398:-1
position: 5398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5991:-1
position: 5991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5398-5991:-1:exon

VSAL_RS22145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22145
old locus tag: VSAL_p320_10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012548905.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2913 family protein
translation: MSKLKYHQAFTNLTTLALLHLYSYMEMSSRFVPMKKRSELLIKFLKKQMALQGNAIIKKDIKVLITQARQGKNIEKKLGELHKVNCQYGEKFTDADHLFILLTYLYEQHGFESTLDNSEIEREPGIIYTDSELIDTCFSDENILFRPLPLSVIMDEPSRLVDIINGHGGMFIAEHLSTSIDNRCATVLLHKIPTPEK
SIO_010081: VSAL_RS22145
subclass of: SO_0000673
so part of: VSAL_RS22145
location: complement(5398..5991)
location: region:5398-5991:-1
so has part: feature:5398-5991:-1:exon

WP_012552315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5398-5991:-1:exon

VSAL_RS22150
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22150
old locus tag: VSAL_p320_11
so part of: sequence
location: complement(6403..6633)
location: region:6403-6633:-1
so has part: feature:6403-6633:-1:exon
subclass of: SO_0000010

position:6403:-1
position: 6403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6633:-1
position: 6633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6403-6633:-1:exon

VSAL_RS22150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22150
old locus tag: VSAL_p320_11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011263974.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DinI-like family protein
translation: MRIEMILNSAFLPRNGTALIQQEMERRVWQRYPDARIRLRKGTSNHLEIYAPKNDKEAANKLIEEMFNDAEEWLYV
SIO_010081: VSAL_RS22150
subclass of: SO_0000673
so part of: VSAL_RS22150
location: complement(6403..6633)
location: region:6403-6633:-1
so has part: feature:6403-6633:-1:exon

WP_044583704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6403-6633:-1:exon

VSAL_RS22155
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22155
old locus tag: pVSAL320_12
old locus tag: VSAL_p320_12
so part of: sequence
location: complement(7493..8320)
location: region:7493-8320:-1
so has part: feature:7493-8320:-1:exon
subclass of: SO_0000010

position:7493:-1
position: 7493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8320:-1
position: 8320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7493-8320:-1:exon

VSAL_RS22155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22155
old locus tag: pVSAL320_12
old locus tag: VSAL_p320_12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011263975.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSISDLLSKIQIKKQYDAEYRSKRKNRKHELIELHRSVVADENKKKPKTPFKFDFRSRRLLRSGKWEILPPEYARILKSCEEFIANPNRFPALNAWGGEGVNNIQCRRLVANVLACIIVNTDLIGGRIGLPTEAGLKTISYDHLQEDYALRFGRFISPKSFAKAISYLKRAGYLHSERINVCVDLKEGTIRSAPAYKQFSERFFSDLKVVRYSNICQLIIASRKRQEKKGLRFSWVSFRTLANGVQEVFNADKLNNVAQSVTAVFDAYLPHPAPH
SIO_010081: VSAL_RS22155
subclass of: SO_0000673
so part of: VSAL_RS22155
location: complement(7493..8320)
location: region:7493-8320:-1
so has part: feature:7493-8320:-1:exon

WP_044583705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7493-8320:-1:exon

VSAL_RS22160
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22160
old locus tag: pVSAL320_13
old locus tag: VSAL_p320_13
so part of: sequence
location: complement(8744..9361)
location: region:8744-9361:-1
so has part: feature:8744-9361:-1:exon
subclass of: SO_0000010

position:8744:-1
position: 8744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9361:-1
position: 9361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8744-9361:-1:exon

VSAL_RS22160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22160
old locus tag: pVSAL320_13
old locus tag: VSAL_p320_13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017449276.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MTTIGERIKSLRLNQGLSQESLAEKINVTKSTISQWEVGKAQPKNKNLLSIVTFFDTTYEYLKGGGEIDDRCPRVVSVPFYNVSVAAGLGIINDSETYTYVDIENLQVSNIEHLVSLTASGDSMEPVLKDGSILVVDTQSKNIIDGHMYVFRQDDLLRVKLISYEKNHLIVTSYNKEYKDEMYKFSELDDLNIIGQVIWHSTKLN
SIO_010081: VSAL_RS22160
subclass of: SO_0000673
so part of: VSAL_RS22160
location: complement(8744..9361)
location: region:8744-9361:-1
so has part: feature:8744-9361:-1:exon

WP_012552318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8744-9361:-1:exon

VSAL_RS23130
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS23130
old locus tag: VSAL_p320_14
so part of: sequence
location: 9539..9706
location: region:9539-9706:1
so has part: feature:9539-9706:1:exon
subclass of: SO_0000010

position:9539:1
position: 9539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9706:1
position: 9706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9539-9706:1:exon

VSAL_RS23130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS23130
old locus tag: VSAL_p320_14
inference: COORDINATES: protein motif:HMM:NF017333.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraY domain-containing protein
translation: MSKNKKQGAIGLWFELDKETNHLLKLQAERNGRSKRAEALAIVKKDIQQKLTNIR
SIO_010081: VSAL_RS23130
subclass of: SO_0000673
so part of: VSAL_RS23130
location: 9539..9706
location: region:9539-9706:1
so has part: feature:9539-9706:1:exon

WP_012552319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9539-9706:1:exon

VSAL_RS22165
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22165
old locus tag: pVSAL320_16
old locus tag: VSAL_p320_16
so part of: sequence
location: 10560..11087
location: region:10560-11087:1
so has part: feature:10560-11087:1:exon
subclass of: SO_0000010

position:10560:1
position: 10560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11087:1
position: 11087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10560-11087:1:exon

VSAL_RS22165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22165
old locus tag: pVSAL320_16
old locus tag: VSAL_p320_16
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAELHALNATLSDITESDKDESQFVQKLVYGRYKPQPDFHFPRSEVKRHINSAIGFCLAHISNTHVTYLNLDDIELIDVNLTASCGHCPTPHKTNDIPFATLISCSSDFELNKRGAAKTVFLRCHNVDVQTDLLNRMGLFAFICEERNYSSPVTKDNWTSRIDYRRATKRAQELR
SIO_010081: VSAL_RS22165
subclass of: SO_0000673
so part of: VSAL_RS22165
location: 10560..11087
location: region:10560-11087:1
so has part: feature:10560-11087:1:exon

WP_049940481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10560-11087:1:exon

VSAL_RS22170
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22170
old locus tag: VSAL_p320_17
so part of: sequence
location: 11098..11370
location: region:11098-11370:1
so has part: feature:11098-11370:1:exon
subclass of: SO_0000010

position:11098:1
position: 11098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11370:1
position: 11370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11098-11370:1:exon

VSAL_RS22170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22170
old locus tag: VSAL_p320_17
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHCVLLPVMAFLSFSVHAELVNVSYDFSNEQQYQSTVLLPTSESWELSTVVDKQVITQWEKGLDSEFKPVYHIVSEGVNITAKPINNEQ
SIO_010081: VSAL_RS22170
subclass of: SO_0000673
so part of: VSAL_RS22170
location: 11098..11370
location: region:11098-11370:1
so has part: feature:11098-11370:1:exon

WP_044583707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11098-11370:1:exon

VSAL_RS22175
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22175
old locus tag: pVSAL320_18
old locus tag: VSAL_p320_18
so part of: sequence
location: 11441..12634
location: region:11441-12634:1
so has part: feature:11441-12634:1:exon
subclass of: SO_0000010

position:11441:1
position: 11441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12634:1
position: 12634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11441-12634:1:exon

VSAL_RS22175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22175
old locus tag: pVSAL320_18
old locus tag: VSAL_p320_18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012548923.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS91-like element ISVsa9 family transposase
translation: MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTAAFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFTLPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHLSVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDWSRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLDHRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRHRGEALPRVYAALGMTIEAEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA
SIO_010081: VSAL_RS22175
subclass of: SO_0000673
so part of: VSAL_RS22175
location: 11441..12634
location: region:11441-12634:1
so has part: feature:11441-12634:1:exon

WP_044583708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11441-12634:1:exon

VSAL_RS22180
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22180
old locus tag: pVSAL320_19
old locus tag: VSAL_p320_19
so part of: sequence
location: complement(13144..14130)
location: region:13144-14130:-1
so has part: feature:13144-14130:-1:exon
subclass of: SO_0000010

position:13144:-1
position: 13144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14130:-1
position: 14130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13144-14130:-1:exon

VSAL_RS22180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22180
old locus tag: pVSAL320_19
old locus tag: VSAL_p320_19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011263960.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MTYSTAINSTITKETEATNVSSFEQSDSSKNEMGKKRKISRKRAVVRVSKDIYQMVTDRIIAALENGVKPWACPWDRTNECSMLPMNFKTKTNYSGVNILLLWSETVEKGFTSPYWLTYKQANELGGNVIKGQKGTTIVYYKSWEKENEDGKIETIPMLKTFTVFNIDQVDNIEKPVAMVKESREKNEFVTLNHVENAIKNTNMTINHCGVRAFYSPAHDEITLPMVDRFNSSYDYYATAWHELVHSTGHKTRLDRDLKNGFGSKDYAFEELIAELGAEFCCADLGIVGDVQHESYIASWLERLNNDKKFIFKAASQASKAHQWLLKS
SIO_010081: VSAL_RS22180
subclass of: SO_0000673
so part of: VSAL_RS22180
location: complement(13144..14130)
location: region:13144-14130:-1
so has part: feature:13144-14130:-1:exon

WP_012552323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13144-14130:-1:exon

VSAL_RS23140
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS23140
so part of: sequence
location: 14904..15053
location: region:14904-15053:1
so has part: feature:14904-15053:1:exon
subclass of: SO_0000010

position:14904:1
position: 14904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15053:1
position: 15053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14904-15053:1:exon

VSAL_RS23140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS23140
inference: COORDINATES: protein motif:HMM:NF013968.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hok/Gef family protein
translation: MLKKSAVTSLVVICMTILIGLWMVRDSLCDFSYQSGSTIITATLAYESR
SIO_010081: VSAL_RS23140
subclass of: SO_0000673
so part of: VSAL_RS23140
location: 14904..15053
location: region:14904-15053:1
so has part: feature:14904-15053:1:exon

WP_083799331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14904-15053:1:exon

VSAL_RS22185
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22185
old locus tag: pVSAL320_21
old locus tag: VSAL_p320_21
so part of: sequence
location: complement(15125..15391)
location: region:15125-15391:-1
so has part: feature:15125-15391:-1:exon
subclass of: SO_0000010

position:15125:-1
position: 15125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15391:-1
position: 15391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15125-15391:-1:exon

VSAL_RS22185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22185
old locus tag: pVSAL320_21
old locus tag: VSAL_p320_21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012548929.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFSRVKEGEFKRLVDTKTITTLIAQESNNEHNKFSLFGIDEKNQLGYAVRHGRIYELRTWRLDILSALVKSLGFTSIEVYFSKVGKK
SIO_010081: VSAL_RS22185
subclass of: SO_0000673
so part of: VSAL_RS22185
location: complement(15125..15391)
location: region:15125-15391:-1
so has part: feature:15125-15391:-1:exon

WP_012552325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15125-15391:-1:exon

VSAL_RS22190
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22190
old locus tag: pVSAL320_22
old locus tag: VSAL_p320_22
so part of: sequence
location: 15528..16211
location: region:15528-16211:1
so has part: feature:15528-16211:1:exon
subclass of: SO_0000010

position:15528:1
position: 15528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16211:1
position: 16211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15528-16211:1:exon

VSAL_RS22190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22190
old locus tag: pVSAL320_22
old locus tag: VSAL_p320_22
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEFSIDFYKHYISVYEKNITKFEHILTDSDLTDRLYYEKTYYDILSKLYISENDDMYDSAQNFISEMNKDIPDDKCKDFPYLLGLLNGYYKIFLIKIKSEEKDIYINEAIEFLHGYAIELNDLYDELATCKEDFDVIPYSLNVKIHDEMDILYQSINPITDNLKSYFLSSRHGGARLNAGRKKEEPTRQMRIPKSLYTLINDLKIAYKDLTDKDKEIFRSSLEDIFK
SIO_010081: VSAL_RS22190
subclass of: SO_0000673
so part of: VSAL_RS22190
location: 15528..16211
location: region:15528-16211:1
so has part: feature:15528-16211:1:exon

WP_012552326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15528-16211:1:exon

VSAL_RS22195
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22195
old locus tag: pVSAL320_23
old locus tag: VSAL_p320_23
so part of: sequence
location: complement(16310..16576)
location: region:16310-16576:-1
so has part: feature:16310-16576:-1:exon
subclass of: SO_0000010

position:16310:-1
position: 16310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16576:-1
position: 16576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16310-16576:-1:exon

VSAL_RS22195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22195
old locus tag: pVSAL320_23
old locus tag: VSAL_p320_23
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYISFILLIFLFGCSIQKNEEMWFSSNGKVATDNEMLQCFKKCSFDNVLFKRLANADINGDFNEAYAQLLDAVQCIEHSGYEKRVPK
SIO_010081: VSAL_RS22195
subclass of: SO_0000673
so part of: VSAL_RS22195
location: complement(16310..16576)
location: region:16310-16576:-1
so has part: feature:16310-16576:-1:exon

WP_012552327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16310-16576:-1:exon

VSAL_RS22520
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22520
old locus tag: VSAL_p320_24
so part of: sequence
location: 16858..19917
location: region:16858-19917:1
so has part: feature:16858-19917:1:exon
subclass of: SO_0000010

position:16858:1
position: 16858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19917:1
position: 19917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16858-19917:1:exon

VSAL_RS22520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22520
old locus tag: VSAL_p320_24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552328.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3-like element ISVsa19 family transposase
translation: MTKLAIFTPKEQRDFDTPPKFYKIDRSRYFSISSEIKRSGFNKLRTDINRVGFILQLGYFRASGKFYVKEDFRKRDIKYVCNMLEITEKIDINLYSDTSRKYHRDNILSLSGWKLPDESHDEKLNYHAKWFIEQQLSPRKVIKALVEYCWSNKLIIPTYSKLSAYITVHFNDYEEQLLVIIKKQMTKEQNESLQTLFNSIDKTRPLSRPPITSLKTINQSVKPTEIQKNVETFEMVKSYHLSVKTLTHHLQLTDQATEYFATWVKKAQTFQLTSFSSTHKAYLHMLAYLKHQFYLRQDTLIDIYLKSTLSTKSQLTAKLQQIEKEQQSGRNTAIKVVSKSNKNLTKFRNRVIDIVTQSPLSDTEVVRQLENLIEESLRSYDKKEQDNIREMESFLAALTGNGRYFDIVESLSLKLQRRVSNILKIVEFSDRSTNKELLSAINHFSLSDGDVGHNPPLEFLNQAERDAVVREGKFRVSLYKALLFFHVADDIKAGQLIFDATYKYKGIFDYLIDEETWAKDRDKLLQAAGLWEFSNVSTVLDGLRKKLNIKYHDVNIRLVEGKNPYFQLDSDNRPKVKTPKIDNNDFGFVGDTLMQNGYVPIQKILADVNQVCDFKSCFTHFSNKHKKMKPSLNVLLAGLLGKGCNLGLNRIANISVGISEDVLNNTVKWFFDLKNIQAASDSIVSYIDKLSLANAYRHDANQLHTSSDGQKYYVSVDSLNSTYSFKYFGSEKGSTVYTFIDERQALFYSTVISASEREAAYVLDGITHNDVVKSDIHSTDTHGYTESIFGAAHFMGTSFAPRIKGLGSQTIYDFDGKSLHSEKGHTIRPSRAIRKKLIKDNWEDILRFMVTIKLKKASASRLFSRLNSYTKQMPLYNALKEFGRIMKSNFLLTYYDDMELRQRIEKQLNRVELSNKLAKAIFFANNQEIQEGEKDEQDLTAACKMLIQNSIVLWNYLYLSQYLANLNGVEERTNAAQSILNGSVLTWRHINLHGQYDFTRDSANDDEFDLERILALLIV
SIO_010081: VSAL_RS22520
subclass of: SO_0000673
so part of: VSAL_RS22520
location: 16858..19917
location: region:16858-19917:1
so has part: feature:16858-19917:1:exon

WP_012552328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16858-19917:1:exon

VSAL_RS22525
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22525
so part of: sequence
location: 20155..20604
location: region:20155-20604:1
so has part: feature:20155-20604:1:exon
subclass of: SO_0000010

position:20155:1
position: 20155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20604:1
position: 20604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20155-20604:1:exon

VSAL_RS22525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: MbeB family mobilization protein
translation: MSKISDLAKNFEEKSQQQAIDTKQTLKNEFNKHEAFIEKELRLSELKMKDVIHAQNRRLKCLILKTWFWMPVMLINLLLVSWGVLYYQGNQIKKNLEIIRKQNQKMKELEKYNVKVITSDGVNYLVLPKGAIIQDTYQTEMDKYVIKWK
SIO_010081: VSAL_RS22525
subclass of: SO_0000673
so part of: VSAL_RS22525
location: 20155..20604
location: region:20155-20604:1
so has part: feature:20155-20604:1:exon

WP_049940482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20155-20604:1:exon

VSAL_RS22530
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22530
so part of: sequence
location: 20608..20817
location: region:20608-20817:1
so has part: feature:20608-20817:1:exon
subclass of: SO_0000010

position:20608:1
position: 20608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20817:1
position: 20817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20608-20817:1:exon

VSAL_RS22530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22530
inference: COORDINATES: protein motif:HMM:NF016769.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MbeD family mobilization/exclusion protein
translation: MTELEKQLLNAFEILQEQHEKQHQDFQSAYKRLEEMFSITSKENKMLNEQVNHLSDQVSNLSKQLVRRK
SIO_010081: VSAL_RS22530
subclass of: SO_0000673
so part of: VSAL_RS22530
location: 20608..20817
location: region:20608-20817:1
so has part: feature:20608-20817:1:exon

WP_075519087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20608-20817:1:exon

VSAL_RS22210
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22210
old locus tag: pVSAL320_26
old locus tag: VSAL_p320_26
so part of: sequence
location: complement(21116..22309)
location: region:21116-22309:-1
so has part: feature:21116-22309:-1:exon
subclass of: SO_0000010

position:21116:-1
position: 21116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22309:-1
position: 22309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21116-22309:-1:exon

VSAL_RS22210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22210
old locus tag: pVSAL320_26
old locus tag: VSAL_p320_26
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012548923.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS91-like element ISVsa9 family transposase
translation: MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTAAFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFTLPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHLSVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDWSRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLDHRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIEAEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA
SIO_010081: VSAL_RS22210
subclass of: SO_0000673
so part of: VSAL_RS22210
location: complement(21116..22309)
location: region:21116-22309:-1
so has part: feature:21116-22309:-1:exon

WP_012548955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21116-22309:-1:exon

VSAL_RS22215
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22215
old locus tag: pVSAL320_27
old locus tag: VSAL_p320_27
so part of: sequence
location: 22851..23915
location: region:22851-23915:1
so has part: feature:22851-23915:1:exon
subclass of: SO_0000010

position:22851:1
position: 22851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23915:1
position: 23915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22851-23915:1:exon

VSAL_RS22215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22215
old locus tag: pVSAL320_27
old locus tag: VSAL_p320_27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004399178.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MKKLNYIIFYSALFTAGFSHADVTFEDSRGKLITLDKYPQKIVAIASSAPIIYSAVSQKPETIISMTAKSKKTIINGLYSDFFPYLKSVSADAAKDKFVPNVEAILKYNPDLIFQWGYDPKLSEPLERVGLTVATWPCCSDLDRQSTVLMSGYISGNIERAKMIINSANQASDTLKSTLSSINKNNYPTMLEIDQLDQNIRIIANNSRDYSISGVDNLGHDDNAEWWKTINVEQLYIWNPEMIIIPAWAEQLTPNAFYTNPLLADLHAVKNRNVYKVPLFHRSPDASEAYLTMQWLAHISYPELFTNSSFIDKVRHAYKTIYGVDISENQYIRIMQTEQNKVSHDYEKKFGLKG
SIO_010081: VSAL_RS22215
subclass of: SO_0000673
so part of: VSAL_RS22215
location: 22851..23915
location: region:22851-23915:1
so has part: feature:22851-23915:1:exon

WP_012552329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22851-23915:1:exon

VSAL_RS22220
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22220
old locus tag: pVSAL320_28
old locus tag: VSAL_p320_28
so part of: sequence
location: 23912..24955
location: region:23912-24955:1
so has part: feature:23912-24955:1:exon
subclass of: SO_0000010

position:23912:1
position: 23912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24955:1
position: 24955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23912-24955:1:exon

VSAL_RS22220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22220
old locus tag: pVSAL320_28
old locus tag: VSAL_p320_28
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004399177.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron ABC transporter permease
translation: MNNIVYYRPSRDKCILGLIGILVMLTFYSATLGRYDITFDKVIMILLDNVISSSDITWSTIESRVVELIRMPRILAAILIGIGLSVSGVAAQALFRNPLVDSTIIGVTSGAAFGGTLAILLFESTIMTVLLSFIFGMLSVFAVMLLARINGRTSVLTLVLVGVIISTFFGAAISIVKLLADPFSKLPSITYWLMGSLSAVSYDSLVILLLTVLPSSIIIYLLRYQMNIVSMGEERASALGTPFNKVRWIVLIAMAVISSGVVATAGAIGWVGLIIPHVARFLVGANHIRLIPTAALIGGIFMLAIDNAARTMSDAEIPIGIMTSLIGVPLFAFILRRSQSNSGWNND
SIO_010081: VSAL_RS22220
subclass of: SO_0000673
so part of: VSAL_RS22220
location: 23912..24955
location: region:23912-24955:1
so has part: feature:23912-24955:1:exon

WP_012552330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23912-24955:1:exon

VSAL_RS22225
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22225
old locus tag: pVSAL320_29
old locus tag: VSAL_p320_29
so part of: sequence
location: 24987..25694
location: region:24987-25694:1
so has part: feature:24987-25694:1:exon
subclass of: SO_0000010

position:24987:1
position: 24987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25694:1
position: 25694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24987-25694:1:exon

VSAL_RS22225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22225
old locus tag: pVSAL320_29
old locus tag: VSAL_p320_29
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004399176.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MTILSNYSITIDKGDVVAIMGANGVGKTTLLTALIGSKSISQGAISVDGVIGYVPQLFDMPFSYSVLDIVLMGRARYLGLTKTPNSNDFGLARYYIEMMQITHLSERNFNQLSGGQKQLVMIAQALTSQCDVLILDEPFSSLDYHNQTIVLDKIRQLNQELGMTVVYTTHMPQHAIETASHVLLMSGKSEYLYGTTSDTLTSQSLTALYGIEVGVAVFQSDQSITLAPRFKRSFL
SIO_010081: VSAL_RS22225
subclass of: SO_0000673
so part of: VSAL_RS22225
location: 24987..25694
location: region:24987-25694:1
so has part: feature:24987-25694:1:exon

WP_044583712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24987-25694:1:exon

VSAL_RS22230
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22230
old locus tag: pVSAL320_30
old locus tag: VSAL_p320_30
so part of: sequence
location: 25691..26980
location: region:25691-26980:1
so has part: feature:25691-26980:1:exon
subclass of: SO_0000010

position:25691:1
position: 25691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26980:1
position: 26980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25691-26980:1:exon

VSAL_RS22230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22230
old locus tag: pVSAL320_30
old locus tag: VSAL_p320_30
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004399175.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIGYITWGCGSQVLSFRDYSHWIDDLIYVHELPKINLNQYAAVIIACHTNGEFIAQHAEQINQYVRDGGFLIAFPVRGIDQWLDVVDVKWEDKRIEDWLWWTKSDGYIELYQPTRDHSLFDFVNIEDMKWHWHGVFACGHTGLSLLNTENAHDSLIVDFPNLPNNGRVLLTTLDPHSHNGQRFMPAATRFVTGFYPWLNCELSIDREVIPDFNVTYLSSSDIPTENEPPYLAATFDNTPGNINFKSIYELQDHIWLSDVLIVPRICDQFYLRTLQDKFMNYLAKGGQLIINTETVIEWLPVLKAFKTISPNPFVNLKVRVNNDPYGFFSNMPEDFYTWEGVFGQYSRGYSEPPENAVYLTHVGCGEDPKPSDWMWQYPTDDGRGGKVVVHNGDDYHRYPDHGIHKNTLLRDICLGLIKNRNRTIVNV
SIO_010081: VSAL_RS22230
subclass of: SO_0000673
so part of: VSAL_RS22230
location: 25691..26980
location: region:25691-26980:1
so has part: feature:25691-26980:1:exon

WP_012552332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25691-26980:1:exon

VSAL_RS22235
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22235
old locus tag: pVSAL320_31
old locus tag: VSAL_p320_31
so part of: sequence
location: complement(27160..28485)
location: region:27160-28485:-1
so has part: feature:27160-28485:-1:exon
subclass of: SO_0000010

position:27160:-1
position: 27160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28485:-1
position: 28485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27160-28485:-1:exon

VSAL_RS22235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22235
old locus tag: pVSAL320_31
old locus tag: VSAL_p320_31
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017099621.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISNCY family transposase
translation: MNQKELNRVDVIRDVCEKRLTQENASNTLNLTRRQVQRLVNKYRENGASGLASLQRGKPSNRRFSPAFKRNTLSILKDKYVDFGPTFANEKLLEQHGIKLSSETLRHWMIDEGLWKSRAKPKPKTYQPRYRRESLGELIQIDGSHHDWFEGRADKCCLLVFIDDATGRLMTLRFSEVESTYDYMNATREYIEQHGKPIAFYSDKHSVFRINKKAPLSGNQMTQYGRALYELNIDLICANSSQAKGRVERANKTLQDRLIKEMRLAGIDSMEQANAWLPIFIADFNHRFGRAPHSLEEAHRPLRESSEELDDIFARQKTRKVSNALTLQYDKVVYLIEPTDATARLAGKNVMIYDYPDGTLSIKHCGKALPYHVFDKLRQVNQGAVVDNKRLGAALSFAKRSQEERSDTLERTRSAQTFSRTAQKRARQINPILRESLKPDK
SIO_010081: VSAL_RS22235
subclass of: SO_0000673
so part of: VSAL_RS22235
location: complement(27160..28485)
location: region:27160-28485:-1
so has part: feature:27160-28485:-1:exon

WP_129545991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27160-28485:-1:exon

VSAL_RS22240
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22240
old locus tag: VSAL_p320_32
pseudo: true
so part of: sequence
location: 29009..>29830
location: region:29009-29830:1
so has part: feature:29009-29830:1:exon
subclass of: SO_0000010

position:29009:1
position: 29009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29830:1
position: 29830
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29009-29830:1:exon

VSAL_RS22240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22240
old locus tag: VSAL_p320_32
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012548923.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS91-like element ISVsa9 family transposase
SIO_010081: VSAL_RS22240
subclass of: SO_0000673
so part of: VSAL_RS22240
location: 29009..>29830
location: region:29009-29830:1
so has part: feature:29009-29830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29009-29830:1:exon

VSAL_RS22245
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22245
pseudo: true
so part of: sequence
location: <29945..30598
location: region:29945-30598:1
so has part: feature:29945-30598:1:exon
subclass of: SO_0000010

position:29945:1
position: 29945
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:30598:1
position: 30598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29945-30598:1:exon

VSAL_RS22245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012548923.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: VSAL_RS22245
subclass of: SO_0000673
so part of: VSAL_RS22245
location: <29945..30598
location: region:29945-30598:1
so has part: feature:29945-30598:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29945-30598:1:exon