Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete sequence.
type: Entry
definition: Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete sequence.
sequence version: NC_011311.1
sequence date: 2022-12-24
sequence: sequence
division: CON
label: NC_011311.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA1705917
keyword: RefSeq
keyword: complete genome
source: Aliivibrio salmonicida LFI1238
organism: Aliivibrio salmonicida LFI1238
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio.
reference: 1
references: 19099551
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nFM178381.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/24/2022 02:13:44\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,501\nCDSs (total) :: 4,356\nGenes (coding) :: 4,112\nCDSs (with protein) :: 4,112\nGenes (RNA) :: 145\nrRNAs :: 13, 12, 12 (5S, 16S, 23S)\ncomplete rRNAs :: 13, 12, 12 (5S, 16S, 23S)\ntRNAs :: 104\nncRNAs :: 4\nPseudo Genes (total) :: 244\nCDSs (without protein) :: 244\nPseudo Genes (ambiguous residues) :: 0 of 244\nPseudo Genes (frameshifted) :: 101 of 244\nPseudo Genes (incomplete) :: 124 of 244\nPseudo Genes (internal stop) :: 38 of 244\nPseudo Genes (multiple problems) :: 17 of 244\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 83540
topology: circular
so has quality: SO_0000988
location: 1..83540
location: region:1-83540:1
RO_0002162: 316275

NC_011311
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA1705917
type: BioSample
SIO_000068: biosample

1
title: The genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238 shows extensive evidence of gene decay
author: Hjerde, E.
author: Lorentzen, M.S.
author: Holden, M.T.
author: Seeger, K.
author: Paulsen, S.
author: Bason, N.
author: Churcher, C.
author: Harris, D.
author: Norbertczak, H.
author: Quail, M.A.
author: Sanders, S.
author: Thurston, S.
author: Parkhill, J.
author: Willassen, N.P.
author: Thomson, N.R.
journal: BMC Genomics 9, 616 (2008)
pubmed: 19099551
comments: Publication Status: Online-Only

19099551
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Hjerde, E.
journal: Submitted (26-JUN-2008) Hjerde E., Department of Molecular Biotechnology, University of Tromso, Breivika, 9037 Tromso, NORWAY

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83540:1
position: 83540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-83540:1:source
so part of: sequence
organism: Aliivibrio salmonicida LFI1238
mol type: genomic DNA
strain: LFI1238
isolation source: Atlantic cod
plasmid: pVSAL840
country: Norway:Hammerfest

316275
type: Taxonomy
SIO_000068: taxonomy

VSAL_RS21720
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21720
old locus tag: pVSAL840_01
old locus tag: VSAL_p840_01
so part of: sequence
location: 111..281
location: region:111-281:1
so has part: feature:111-281:1:exon
subclass of: SO_0000010

position:111:1
position: 111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281:1
position: 281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111-281:1:exon

VSAL_RS21720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21720
old locus tag: pVSAL840_01
old locus tag: VSAL_p840_01
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017187955.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraY domain-containing protein
translation: MKKETSVNIVMDQKCNHLLNISKETSGRTKRNEAAARLKDHLLRFQHQDSWEVQKK
SIO_010081: VSAL_RS21720
subclass of: SO_0000673
so part of: VSAL_RS21720
location: 111..281
location: region:111-281:1
so has part: feature:111-281:1:exon

WP_012548839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111-281:1:exon

VSAL_RS21725
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: traA
locus tag: VSAL_RS21725
old locus tag: pVSAL840_02
old locus tag: VSAL_p840_02
so part of: sequence
location: 426..704
location: region:426-704:1
so has part: feature:426-704:1:exon
subclass of: SO_0000010

position:426:1
position: 426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704:1
position: 704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426-704:1:exon

VSAL_RS21725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: traA
locus tag: VSAL_RS21725
old locus tag: pVSAL840_02
old locus tag: VSAL_p840_02
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016800088.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system pilin TraA
translation: MKKWITPRNLLLTGTSVLLATQPALAADMFASGKTAIKDTVGTDSTVETAILSAGAVGAALTGFITKNWIGAIGGFAVGMIFWSVVAPMVGL
SIO_010081: VSAL_RS21725
subclass of: SO_0000673
so part of: VSAL_RS21725
location: 426..704
location: region:426-704:1
so has part: feature:426-704:1:exon

WP_044583691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426-704:1:exon

VSAL_RS21730
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: traL
locus tag: VSAL_RS21730
old locus tag: pVSAL840_03
old locus tag: VSAL_p840_03
so part of: sequence
location: 733..1035
location: region:733-1035:1
so has part: feature:733-1035:1:exon
subclass of: SO_0000010

position:733:1
position: 733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035:1
position: 1035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:733-1035:1:exon

VSAL_RS21730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: traL
locus tag: VSAL_RS21730
old locus tag: pVSAL840_03
old locus tag: VSAL_p840_03
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017817632.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system protein TraL
translation: MEDPHLFYAIPKHLNKGKTIVGLPQSEVLPALLLFAVFFIAKHQLIGLVIGVVWFAGLRIIKTKYGDNIIPLALHWYGSTHVNQHLFTRTPSANKRYWIF
SIO_010081: VSAL_RS21730
subclass of: SO_0000673
so part of: VSAL_RS21730
location: 733..1035
location: region:733-1035:1
so has part: feature:733-1035:1:exon

WP_012548841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:733-1035:1:exon

VSAL_RS21735
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: traE
locus tag: VSAL_RS21735
old locus tag: pVSAL840_04
old locus tag: VSAL_p840_04
so part of: sequence
location: 1035..1595
location: region:1035-1595:1
so has part: feature:1035-1595:1:exon
subclass of: SO_0000010

position:1595:1
position: 1595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1035-1595:1:exon

VSAL_RS21735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: traE
locus tag: VSAL_RS21735
old locus tag: pVSAL840_04
old locus tag: VSAL_p840_04
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012197971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system protein TraE
translation: MLNSNKIDFIALSKALNKLLLIGFVLSLVVSITLALGLLSLANNKSRTLVPPSISKAFTVSDGTIDESYASQMAEYILYLKLNVTPANVERQFSQLLDYANADAWSSVQPQLVRESVLIKKSNLSSTFSVSRVEVAMDSLIVNVHGVLNKSVGDRALTPVSCSYLIYLKYEQGTLTFSSIKKEAQS
SIO_010081: VSAL_RS21735
subclass of: SO_0000673
so part of: VSAL_RS21735
location: 1035..1595
location: region:1035-1595:1
so has part: feature:1035-1595:1:exon

WP_012548842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1035-1595:1:exon

VSAL_RS21740
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: traK
locus tag: VSAL_RS21740
old locus tag: pVSAL840_05
old locus tag: VSAL_p840_05
so part of: sequence
location: 1592..2347
location: region:1592-2347:1
so has part: feature:1592-2347:1:exon
subclass of: SO_0000010

position:1592:1
position: 1592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2347:1
position: 2347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1592-2347:1:exon

VSAL_RS21740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: traK
locus tag: VSAL_RS21740
old locus tag: pVSAL840_05
old locus tag: VSAL_p840_05
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011081575.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system secretin TraK
translation: MKKNPSQPLVMIAAVLLSFLSFEGRAKNLPSNTYPFNDNDTVPIVLSSLNINRLVVRDDKIIGLDCPTGFCTSKGNKQDASGSITLRLNIALPFTAQVTTKNGRNFTLFITPRAIPALVSEFIGTANTRQEKSVFTRDFDYPTALTQFTKSMMLWSERGFLIDGFSLHHVDPSTLPKDTNPLAIIPQTVFVGKEYSGIIYRVLNQSSGQVTLSTSQFYSYSTRSAAITKDTLLPNEDMTLYIVTGGGNHAQ
SIO_010081: VSAL_RS21740
subclass of: SO_0000673
so part of: VSAL_RS21740
location: 1592..2347
location: region:1592-2347:1
so has part: feature:1592-2347:1:exon

WP_012548843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1592-2347:1:exon

VSAL_RS21745
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21745
old locus tag: pVSAL840_06
old locus tag: VSAL_p840_06
so part of: sequence
location: 2337..3767
location: region:2337-3767:1
so has part: feature:2337-3767:1:exon
subclass of: SO_0000010

position:2337:1
position: 2337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3767:1
position: 3767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2337-3767:1:exon

VSAL_RS21745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21745
old locus tag: pVSAL840_06
old locus tag: VSAL_p840_06
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011081576.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MLNKWLKKSTNDATGSFEQGCLINERSIKRNGIITLVILVTLSTLGGVGYTVTRPSTPPPIERPPVDFGAIIEDDFISADNQSALSAQQDTLHTQERTIAALKNEVNRVNAKLDNTVNLQEESFARFKDKMQATFERQRAEMVLQKKEAPAQETDLSVAFGDKSLPPRAIPSSKHNPNAPEFSYQSADAPIFDTTGIDSYEFNWALSEEEKPKRTILNYVPTGTFVTALVTGGADVNAGVLGQGDTVPMVFQTINAGILPNGQSSRLKDCTITGSSYGEISSSRGIVRTNRMSCIFDDGEIIDLAVKGTVFNFGRNGIRGTTILRNGKIVQMAGLSGILTGIGETGKALSSTTSVSALGSTSSLNGSDAALNLLGNATASVGAKLSDYYIQLAELYHPIVELNPGNVVNIVFLEGFPLDALGIEKYEAKQQVQESRSGNNQLLDVITNNPLANQLPQGVKAAMGAQTAPLTDFGSR
SIO_010081: VSAL_RS21745
subclass of: SO_0000673
so part of: VSAL_RS21745
location: 2337..3767
location: region:2337-3767:1
so has part: feature:2337-3767:1:exon

WP_012548844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2337-3767:1:exon

VSAL_RS21750
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: traV
locus tag: VSAL_RS21750
old locus tag: pVSAL840_07
old locus tag: VSAL_p840_07
so part of: sequence
location: 3780..4181
location: region:3780-4181:1
so has part: feature:3780-4181:1:exon
subclass of: SO_0000010

position:3780:1
position: 3780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4181:1
position: 4181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3780-4181:1:exon

VSAL_RS21750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: traV
locus tag: VSAL_RS21750
old locus tag: pVSAL840_07
old locus tag: VSAL_p840_07
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004744672.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system lipoprotein TraV
translation: MNYTVKHTILLLVALLALSGCAAGMNEEFSCNEVGGVSGCATMGDIRANMSAYEQHNNKNRTTATLQAPSSEFLALPRRTREGQPTRSEDKVKKITIFPFTNEHGHFIDTTDIYFILSDSQWQGRLPQAIKKD
SIO_010081: VSAL_RS21750
subclass of: SO_0000673
so part of: VSAL_RS21750
location: 3780..4181
location: region:3780-4181:1
so has part: feature:3780-4181:1:exon

WP_012548845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3780-4181:1:exon

VSAL_RS21755
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: traC
locus tag: VSAL_RS21755
old locus tag: pVSAL840_08
old locus tag: VSAL_p840_08
so part of: sequence
location: 4191..6722
location: region:4191-6722:1
so has part: feature:4191-6722:1:exon
subclass of: SO_0000010

position:4191:1
position: 4191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6722:1
position: 6722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4191-6722:1:exon

VSAL_RS21755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: traC
locus tag: VSAL_RS21755
old locus tag: pVSAL840_08
old locus tag: VSAL_p840_08
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017188040.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein TraC
translation: MSLTLLKKHSKTEHNHLHHQLPYRFFDDEHTLFHNTTSIGFGFQLNVLGGANDSAIEALNKILTTLPQGKQWDYQFTLTSNHQVSHLIEQNTALMSKRGGICARLANNERTYADFASTSGFLHRQKHHFTLREHHSFLFVSTTSRDIDKINDTKATLYTSLTQLGLTLTPIGVPELISYVDGHLNFNANKTRPEKATYNEHEPLHTQMLSPDSEFLVSRGHVDSRHTDNKHGEQTSRVINFGLLRLPSDFRLYALPECFSSLKNVAQSINCPFTCSVQFQIEDNGKATADNDGHISALMKTVGSKMQVLVPTAKDELAERKQIQLGLLSKEFTMVSMVMNLSLFSSKEKQRDDSQAAVSAFSSGGIDIAPLNMLQGHAYLSSLPFMMSEGFWKDSKRAGRIRTMKSSNAVNFFPIIHDNKNFSGGMLLPTMRQQISFFDPFNCGSDNYNIALTGGSGAGKSFFVQLLAKSVYSKFGKVWILDKGASYKKLTLMLEGTYMTSKEIFLNPFTHLGKIKAKSEHEASVDDELNPLAEVLDNITALFATMASPREELDPFQTAVLGDAILNAWNDKGPLTRVDDVQAALFAISTESDNDRRISDIATQLNKYCSNNVYGDTFNKPSMLNPNIHITTLELDGFPEAVLRPAIFALMVSINQQMYLTGSRSTPKLCIIEEAWSLLSGANAQAREFINTGYRTARKFGGSFCTVTQGITDFFANAEAMACYNNSDIHITLRQGEGFTSFLQDNPDTFSPYEQQVVKGFEKSGVAGYSCAMIKAGGHASFHRLFTDPFTRACLSTEPNEFEFCETLMSNGTELMDAIEQTAEHFYGDEMQKFDAMLQGAKQ
SIO_010081: VSAL_RS21755
subclass of: SO_0000673
so part of: VSAL_RS21755
location: 4191..6722
location: region:4191-6722:1
so has part: feature:4191-6722:1:exon

WP_012548846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4191-6722:1:exon

VSAL_RS21760
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: trbI
locus tag: VSAL_RS21760
old locus tag: pVSAL840_09
old locus tag: VSAL_p840_09
so part of: sequence
location: 6719..7066
location: region:6719-7066:1
so has part: feature:6719-7066:1:exon
subclass of: SO_0000010

position:6719:1
position: 6719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7066:1
position: 7066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6719-7066:1:exon

VSAL_RS21760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: trbI
locus tag: VSAL_RS21760
old locus tag: pVSAL840_09
old locus tag: VSAL_p840_09
inference: COORDINATES: protein motif:HMM:NF021213.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system protein TrbI
translation: MKKIPYTQWLLIGACLVSLSVSVLTLITRPSVAVFDVKRTLTQFQHQLIEKGVTQAEHQAYLTHFAQALERATAQYSQEHNVLILTTPAVVAGADDITTVLQQHIIEQYQQRGQG
SIO_010081: VSAL_RS21760
subclass of: SO_0000673
so part of: VSAL_RS21760
location: 6719..7066
location: region:6719-7066:1
so has part: feature:6719-7066:1:exon

WP_012548847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6719-7066:1:exon

VSAL_RS21765
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: traW
locus tag: VSAL_RS21765
old locus tag: pVSAL840_10
old locus tag: VSAL_p840_10
so part of: sequence
location: 7063..7719
location: region:7063-7719:1
so has part: feature:7063-7719:1:exon
subclass of: SO_0000010

position:7063:1
position: 7063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7719:1
position: 7719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7063-7719:1:exon

VSAL_RS21765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: traW
locus tag: VSAL_RS21765
old locus tag: pVSAL840_10
old locus tag: VSAL_p840_10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005306925.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system protein TraW
translation: MKPSILLLTLVLLSPSLHAKSMGVAGAIFPIGEIDMLLWIEQRLQRFEANGQMDIMKNDMKQAVKKQVERPTPVLGLGTTTEPTTFTVNPTLRLGKDVMDAQGRLLFAKGMEINPFDSTTWPNGEYPAFEFSKTLVFIDGDDEKQLAWAKQYRTNKPIKWILINGSINKSALALNTRVYFDQKGTLTRALKLKNTPSVVMQVGTQWQIQEVDVSHQPR
SIO_010081: VSAL_RS21765
subclass of: SO_0000673
so part of: VSAL_RS21765
location: 7063..7719
location: region:7063-7719:1
so has part: feature:7063-7719:1:exon

WP_012548848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7063-7719:1:exon

VSAL_RS21770
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: traU
locus tag: VSAL_RS21770
old locus tag: pVSAL840_11
old locus tag: VSAL_p840_11
so part of: sequence
location: 7732..8736
location: region:7732-8736:1
so has part: feature:7732-8736:1:exon
subclass of: SO_0000010

position:7732:1
position: 7732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8736:1
position: 8736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7732-8736:1:exon

VSAL_RS21770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: traU
locus tag: VSAL_RS21770
old locus tag: pVSAL840_11
old locus tag: VSAL_p840_11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004744668.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer pilus assembly protein TraU
translation: MKLSVFILFISVLCLPQRALAMGATCSGHFINPISDICWSCLFPMTIGKVPVIPSAYPDTNNPSIPISYCPKPPPVYVQIGLNIGYWEPYSLVDVTRIPYCMVNMGMELGGANQPEIGGRVTSRDNDSSDGGFYHAHWYKYPIIYWLQIMQSTACMATDTFDVAYMTEVDPTWDDDELAFVLNPEAILFGNPIAQLACVPEAILTTSNLALPLDALFWCLGSQGSAYPLTGTTNYRDTPIQAATLIMERLNYKLHRQGIVWETRGEIGAICYQWPEPILPKSRYRYQMTAPIPDAQWCHPYTTTTAIWESGHDNPTTGDNFGFMNWRKRNCVFL
SIO_010081: VSAL_RS21770
subclass of: SO_0000673
so part of: VSAL_RS21770
location: 7732..8736
location: region:7732-8736:1
so has part: feature:7732-8736:1:exon

WP_012548849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7732-8736:1:exon

VSAL_RS23485
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS23485
so part of: sequence
location: 8757..9122
location: region:8757-9122:1
so has part: feature:8757-9122:1:exon
subclass of: SO_0000010

position:8757:1
position: 8757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9122:1
position: 9122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8757-9122:1:exon

VSAL_RS23485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS23485
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTSINSTWHNELTVLYCSAVITLLLIASISDRPQWIGWGVGTVIVYAFSFIPRQQTPSLLGNVLINTCHLVPLIAGGLFYVREQNSLFDAIFYGAAMWMMIVTSAYVTPHLRAKTQGEKK
SIO_010081: VSAL_RS23485
subclass of: SO_0000673
so part of: VSAL_RS23485
location: 8757..9122
location: region:8757-9122:1
so has part: feature:8757-9122:1:exon

WP_044583682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8757-9122:1:exon

VSAL_RS21780
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: trbC
locus tag: VSAL_RS21780
old locus tag: pVSAL840_12
old locus tag: VSAL_p840_12
so part of: sequence
location: 9119..9817
location: region:9119-9817:1
so has part: feature:9119-9817:1:exon
subclass of: SO_0000010

position:9119:1
position: 9119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9817:1
position: 9817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9119-9817:1:exon

VSAL_RS21780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: trbC
locus tag: VSAL_RS21780
old locus tag: pVSAL840_12
old locus tag: VSAL_p840_12
inference: COORDINATES: protein motif:HMM:TIGR02742.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system pilin assembly protein TrbC
translation: MRRLSSALVIVTLSSFTAHSNDGYSNEQLRALQQRENDALNTTSPLIGYEVDRAIESSHAMRDKILAMSQQVNQRITTDALSEGLYFPEPTTNPNANPTGIIALVSLSMPDIALQQLLIQSEQYQIPLIIRGVLPEGFSATVARINHLLTKDHKKHPINSGIAINPQWFTQFNITQVPAFISIKEGKCTQKGPCRAEDFDVLYGNISMGDALSILSKGDAKENAITAQARTE
SIO_010081: VSAL_RS21780
subclass of: SO_0000673
so part of: VSAL_RS21780
location: 9119..9817
location: region:9119-9817:1
so has part: feature:9119-9817:1:exon

WP_044583683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9119-9817:1:exon

VSAL_RS21785
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: traN
locus tag: VSAL_RS21785
old locus tag: pVSAL840_13
old locus tag: VSAL_p840_13
so part of: sequence
location: 9821..11539
location: region:9821-11539:1
so has part: feature:9821-11539:1:exon
subclass of: SO_0000010

position:9821:1
position: 9821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11539:1
position: 11539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9821-11539:1:exon

VSAL_RS21785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: traN
locus tag: VSAL_RS21785
old locus tag: pVSAL840_13
old locus tag: VSAL_p840_13
inference: COORDINATES: protein motif:HMM:NF009017.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system mating-pair stabilization protein TraN
translation: MNLSLSLLLILVLSPLALAGQEATFNAHLNWAKGATTSTQAKSEFALTPEDYCNDATCKTQLHAPQQTQLSSSELESKAQAQYLTNEGAQAINDGFSKGRPSVENDPTYEFALLAQENAYEISHGLSNPFVDCTSGTLCSLINVQKTCKAPTNTPLIYVQTPTLVTDIRPISTYSCPSGTRLQGNRCVYTERQCRYDRQNLVTKTTRKSREWCFSEGMSYRWNGKEVNRNGFSQGGSKKKYNTSRCKVQEYQICGSVTKSRSATAHCPSGYTLTGDHCSKKIVTWPKSRPTGLISECQSTNNVCVEGSKTKIIDGIRVSLPCWKYETTYQCQTTNTCDALSECTNVSKTCSLMQQGVCVEETLTKSCQEKSCQANTLQCGETSFCLDGDCYDATPTQSDDFHTSVSALAAISAAAEDLGEPPTMFKGTAMKCEKKAAGINDCCKDSGWGQSLGMSCSPEEEALGKAKEGKLTIYVGQYCAKKILGVCTRKKRSYCVYDSKLARIIQEQGTRHQLGLSNGSAKDPTCNPITPEQLQQINFEHLDFSDFYGDMNDNMALPSQNEIQSRLQNNVN
SIO_010081: VSAL_RS21785
subclass of: SO_0000673
so part of: VSAL_RS21785
location: 9821..11539
location: region:9821-11539:1
so has part: feature:9821-11539:1:exon

WP_012548851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9821-11539:1:exon

VSAL_RS21790
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: traF
locus tag: VSAL_RS21790
old locus tag: pVSAL840_14
old locus tag: VSAL_p840_14
so part of: sequence
location: 11549..12292
location: region:11549-12292:1
so has part: feature:11549-12292:1:exon
subclass of: SO_0000010

position:11549:1
position: 11549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12292:1
position: 12292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11549-12292:1:exon

VSAL_RS21790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: traF
locus tag: VSAL_RS21790
old locus tag: pVSAL840_14
old locus tag: VSAL_p840_14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017818843.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system pilin assembly protein TraF
translation: MNRCIAMIAFFVSTGVLAAPNGWRWYNEPTQDAKAPAPITKPNTVTRTLSARAQLTWFKEQHQEAQAAATIDPSNNQKVEKAMRLNQYVSNQSSQFGMTFKEVLLSHPELSYTKDRPVEQAARSTYLELEREKKVHTIKQMAAEGWGFFFVYEGKDTLSQTLAPSIQQFATTHGIEVLGISKDGTTLESIRENRMDDNTLNVAYLPALLLVNPNTKTIKPLAYGFISQDQLLGRFYNVATHYNSPDF
SIO_010081: VSAL_RS21790
subclass of: SO_0000673
so part of: VSAL_RS21790
location: 11549..12292
location: region:11549-12292:1
so has part: feature:11549-12292:1:exon

WP_012548852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11549-12292:1:exon

VSAL_RS21795
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21795
old locus tag: pVSAL840_15
old locus tag: VSAL_p840_15
so part of: sequence
location: 12330..13049
location: region:12330-13049:1
so has part: feature:12330-13049:1:exon
subclass of: SO_0000010

position:12330:1
position: 12330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13049:1
position: 13049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12330-13049:1:exon

VSAL_RS21795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21795
old locus tag: pVSAL840_15
old locus tag: VSAL_p840_15
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIASITLAGVLHVIERAFMAGFIVVSIQITLFVSRIGRFLLSTDTLEAANELNAFSLQKWHQGLGVTWDISWSYTLILLLISFCYFSVGLFCFLRKPENKSKRTKAELFAIVSRYIERTFVVVFIAVSLQITFFLLWLYARTTFSFDALSALSLSDLHQGIEIMHYSFNTTALILFSLLLCVAFKEQQAARQKNTIPTNPSKYCRLRFRAKKILWGAFPIKSSTRKNEIKNETKSNKN
SIO_010081: VSAL_RS21795
subclass of: SO_0000673
so part of: VSAL_RS21795
location: 12330..13049
location: region:12330-13049:1
so has part: feature:12330-13049:1:exon

WP_044583684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12330-13049:1:exon

VSAL_RS21800
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: trbB
locus tag: VSAL_RS21800
old locus tag: pVSAL840_16
old locus tag: VSAL_p840_16
so part of: sequence
location: 13119..13544
location: region:13119-13544:1
so has part: feature:13119-13544:1:exon
subclass of: SO_0000010

position:13119:1
position: 13119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13544:1
position: 13544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13119-13544:1:exon

VSAL_RS21800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: trbB
locus tag: VSAL_RS21800
old locus tag: pVSAL840_16
old locus tag: VSAL_p840_16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006087388.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB
translation: MKSINALLLAFALLMSPQSLAQPPPMENQYAMVFFFRSDCPYCHQFAPTLTQFTQQNNLFTYAFSLDGKGIPNFDVPMPATPEISTLFFANPRSMTVPATFLINVNTQKFVKVSIGAVSGADLQTTFDNILADNQVMEALQ
SIO_010081: VSAL_RS21800
subclass of: SO_0000673
so part of: VSAL_RS21800
location: 13119..13544
location: region:13119-13544:1
so has part: feature:13119-13544:1:exon

WP_012548854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13119-13544:1:exon

VSAL_RS21805
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21805
old locus tag: pVSAL840_17
old locus tag: VSAL_p840_17
so part of: sequence
location: 13541..14926
location: region:13541-14926:1
so has part: feature:13541-14926:1:exon
subclass of: SO_0000010

position:13541:1
position: 13541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14926:1
position: 14926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13541-14926:1:exon

VSAL_RS21805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21805
old locus tag: pVSAL840_17
old locus tag: VSAL_p840_17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014615241.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraH
translation: MKKTRPHLLPLCLVLSFSVSANVNHSLGGFFDELGYHANVSNPSAFKGQSANYYNGGSLFVRTKIQNAQLATMTVPSIKAGCNGIDAFMGGFSHISSDQLVQFGKSVVANATPFAVDLALQTWAPQIKQIRDNLQSIADKWVNQSINSCETAQAAVGGLASFALPQAKQHVCATMGTQNNAFADWVAAKQECGVGGRTPSQLVNARNTPELEDITKTSHNIVWSAIMKNSFLSSDTELAEFLMTLSGTYVYNANGQPTYYPSLLDGNNNLVDALLNGGTISGYDCDNTAAKACLSLRRKNTSISSGSAMQSKIYALLNEMNQSLMNDRPLTQQHTAFLEYTDIPMLSFLKEYAQGEGTVSTSLLDKYARVIAINLLSKYLNNMLNVTQYSLSNTQNDKSDIALISDDISNAKRFISELDEKATRALIAQEEMIANAKVRKAQMDAALSSKTRNNLYFGDKS
SIO_010081: VSAL_RS21805
subclass of: SO_0000673
so part of: VSAL_RS21805
location: 13541..14926
location: region:13541-14926:1
so has part: feature:13541-14926:1:exon

WP_012548855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13541-14926:1:exon

VSAL_RS21810
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: traG
locus tag: VSAL_RS21810
old locus tag: pVSAL840_18
old locus tag: VSAL_p840_18
so part of: sequence
location: 14923..17718
location: region:14923-17718:1
so has part: feature:14923-17718:1:exon
subclass of: SO_0000010

position:14923:1
position: 14923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17718:1
position: 17718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14923-17718:1:exon

VSAL_RS21810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: traG
locus tag: VSAL_RS21810
old locus tag: pVSAL840_18
old locus tag: VSAL_p840_18
inference: COORDINATES: protein motif:HMM:NF010295.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer mating-pair stabilization protein TraG
translation: MTLEYYVYSNGGTARDVLNAIATFFATPTFGSLVSISLMFSVVATLMTFFISRNPASIYKWAAVYFIVPMFLINMKTDMQVIDLTEPNAVRSVSNVPYITAIPTWFASSLMHGMTETIEAVLSQPGDERYGKTGMMFGSRLYQLSRQSNIREVELKGYWSDYFHNCLVGDILINKKYTWDELYAANDIWDFLDTKSMSPLRGVFFGRGNYYTCKDAYPLIKAKMNQAANKDITYLGSYLYGKRASANASFLNTSLSSSYQRYNNISTNASKIMRQNMTMNAIRNGTLEMNATASALNYAYTQNKMQTTSMWAGIALQAKEYMPLLHTTLFILFSCVSLFVAVAALIPSLTVMVLTNYVKTFIVLGIWPALFAILNYIMISALSYTTEGITDSFNGITLSNESALDEMHTRFALLSGYLMMSVPLIAGAILKGGSAVMSSLNYQMAGMINSTNSRTSAAAASGDVNLGNMQVDNRSWANQSANKHDTNLLERMAGQQSTQQADGSTYTQLASGQSVYNTGEAVSNLHWNVGSNQDVQQSLNDNYQTAVNNTQSYSSQLNENIQSGMALQSHWSNNMSEQKSYGEGYNTGAATQISQGTQRMDSASDTLSNEMGWSKDKSNAFLQSTSGSIYARGEGSLSTPAALKALTGASGSLTAGLEGSYRITDEDRETFSNMSSERIGQVQSAMSQYSEGANDILSASSQIDNKAVNSELDQYVQSFTSNWNQSEGLVNNVSQSQAESQNLSTAMSNIEQSGISLKENLMPSFQKFVEKEDSRNAPSILTSTSEGAIAARQEMWNKYQESDDFKNDVFALAGVNLPTTMNNTNEPLAFNAHQTNRRDAHEMKTVSYFTQNTDRMAFTKQSDDLFDKTRFDDIKNDTLSQQEDTRAHINPLEKREPSSPVQPETHTNESQIKPINTEDGYHYYSSFNKEK
SIO_010081: VSAL_RS21810
subclass of: SO_0000673
so part of: VSAL_RS21810
location: 14923..17718
location: region:14923-17718:1
so has part: feature:14923-17718:1:exon

WP_012548856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14923-17718:1:exon

VSAL_RS21815
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21815
old locus tag: pVSAL840_19
old locus tag: VSAL_p840_19
so part of: sequence
location: 17817..18314
location: region:17817-18314:1
so has part: feature:17817-18314:1:exon
subclass of: SO_0000010

position:17817:1
position: 17817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18314:1
position: 18314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17817-18314:1:exon

VSAL_RS21815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21815
old locus tag: pVSAL840_19
old locus tag: VSAL_p840_19
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRYSYLLLTSLFFINTAHATEQTLSKTWKSGSELRKERVAKMRAEDQADVRKMYFFVKHINDVGTPEKAKLDAFLLGLQEAFSVNQFMEKKTLGLTWFCARPSLLNGLNGENPVPEIIQWVYDTYPERFKSNGIYSPSSDALAYGLQLQYRCEGVPLGRIPGYKY
SIO_010081: VSAL_RS21815
subclass of: SO_0000673
so part of: VSAL_RS21815
location: 17817..18314
location: region:17817-18314:1
so has part: feature:17817-18314:1:exon

WP_012548857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17817-18314:1:exon

VSAL_RS21820
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: traD
locus tag: VSAL_RS21820
old locus tag: pVSAL840_20
old locus tag: VSAL_p840_20
so part of: sequence
location: 18326..20404
location: region:18326-20404:1
so has part: feature:18326-20404:1:exon
subclass of: SO_0000010

position:18326:1
position: 18326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20404:1
position: 20404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18326-20404:1:exon

VSAL_RS21820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: traD
locus tag: VSAL_RS21820
old locus tag: pVSAL840_20
old locus tag: VSAL_p840_20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016799657.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system coupling protein TraD
translation: MDTDKRPKHSNYTRGGQITFHNLRMFFQINTALFKWISVSVLGATVLLTYVRAPANTFMAVWYSIRNHTLLKLNAPLTREVTTLWEGKRYTSTLGAQLSNNTLLDLNAQFWYQLQVNFLISTLLGLGLVFIAMTYFKSKGDEQTDDHFIRGIKKATPAEITKEVKAKSKLSSFAIDKHRLFKHNFEIQHLMIDGTTGAGKSVALRKLVRWIRKRGDKAIIYDKGCTFVGKFYNPETDTILNPFDERCANWDIWCDAKEAPDFENMAAALIPQHGDGDPFWVDSARTIFSSTAFQMMKDNEPVSTARLLSLVLTSELETLGSFLKGTESATLVSNKIEKTAISIKSVLATYIKALRFLEGLDEKNEHNALKRPKFSITDWVQDDEQKGFLFLSSNAQQHASLRPLISMWLAIASNAILGMEEDEDRRIWVILDEMPTLHKLPELDAIIAEVRKFGGCYVIGIQSYAQLVKTYGKTTAEVIFDLLNTRFYFRAPSATMAKISALDLGEQEIDISKENYSYGAHAMRDGVSLGHQTVTRPVVSTAEIQTLDDLQCWVRLLGCNLITRLDLVFDKMPQLCHPFIKRNHSMSPEMTAIYEQLTFLELMAPQALDKENRDALRSGQAKNFEDETQMNAEWADQKQAIRANKAKELIQKEKGSMLTPEKKEQERRDIEQEQEAERMINEASIADIELGD
SIO_010081: VSAL_RS21820
subclass of: SO_0000673
so part of: VSAL_RS21820
location: 18326..20404
location: region:18326-20404:1
so has part: feature:18326-20404:1:exon

WP_012548858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18326-20404:1:exon

VSAL_RS21825
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: traI
locus tag: VSAL_RS21825
old locus tag: pVSAL840_21
old locus tag: VSAL_p840_21
so part of: sequence
location: 20545..26355
location: region:20545-26355:1
so has part: feature:20545-26355:1:exon
subclass of: SO_0000010

position:20545:1
position: 20545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26355:1
position: 26355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20545-26355:1:exon

VSAL_RS21825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: traI
locus tag: VSAL_RS21825
old locus tag: pVSAL840_21
old locus tag: VSAL_p840_21
inference: COORDINATES: protein motif:HMM:TIGR02760.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transfer relaxase/helicase TraI
translation: MISISPIASAGEATKYYLDDEKHLNGEQSELTTEKENSESDKEKNYYLKDSNNTAWFGKLATEKGLDGKPIEGDTLQAVLSGSLLDETIHGKRDKHRAGFDLTFSAPKSVSVLALVGGDTRLLDGHNNAVKFALSELEKDAAQVKYTEEDTKKQSYANSKSMLFGLVQHKTSREDDPQLHTHALTANMTRDEQGRLRALATSLKQSGGVINGTMERVYNNQLYYGMLYQSHLSKQAESLGYTIKGAGNGQFEIEGVPQSLMDDFSKRSQQINEKTQDLGFNSQQTRDLAAKNTRKAKTHKDAVELNSTWQHTVKTDGFDITAFINNAKENPVKAPNENVIKPRAVDALTRTINHLSKTQTQLSYEKMVSFAMSEFTKGEKLDALDIKLALDERIASKELIGLDKNNSQFTTTALLNNEKKLINSTKGRPRHMRTQPNDTALSQLNLNKENQNKLAELFLSTKQFNTVNVFGSSEQVAKGLLHVGSESGKRIHIMTQGGISQEKTERTIKRQSHTPLQWIKNTFRADFVHGVNQYLGDKVTPFSNKDVFVFEDSGKFSGDQLIDITNKAKHTNSKIIFLNHASARQGMKSHSSMDLLSKGNTNNINWVNNQPTKAKIKIHDNNLNELVNQYAEKPDKNTIQVLATTNADVKTLNTAIRERLKQTGEVSRQGVSISTLNPHFLSQEQRTLSTHYKPGMVLRSWSEGAMSQYIVSKPHRKTNTLDIIDEKGNQLTIDPSKPAHNFSVFKKESLEIASGDKIITSGKHYASQLAAHQAFIVKKATPQSITLEDREGQQKTIKTKHLTDAPITHNFASTTQKISDTATHLMVQTKAYSASKELLNELSLNRNNIDIFTDDKEKVAAQFEKNEVRPAAIERVMATTQPTEKYLSTLTTNTVTKDVEQALRLLNTPTSNNIEKAVNFAIHHISEKEAGYTQKELVMQAIRYSLEETGTAISKEDIIDTLKNNQETLSSEFSDGTRWTTKDAIHTEKTILDTLARGKNQTTPFVTHAQATEFLQHESRLTQGQKESVHMIATTPDRFVAVQGLAGTGKSTMLEKDIELIHSIDKLSNKETTILGLAPTHAAVNELKNKGVEAQTLQSLLADIQSGKTTANTYQQTLFLLDESSMIGNNDMKHFTALVEKSDAKAVLLGDKAQLQSLSAGKPFELAMSSNALNRTDMTDIVRQQNDTLLGAVHNMVDKQPESSLSKLKQQPNADTGIHKTHHVVSTYEKITPNHRENQEIATEKLAHVVAQDYLSRTEQSQEDTLIIAYTNKERDTITEHIRHGLQQSNQLHKENTLMPRLRSIGATKEEMATMLPYKKGLVVKTGKDTLSTIIHVDNKHNLVTVKEQSTGKERPFFPKNSDHKMTNLFTRSDQPLSTNDKVMMRMTDKDKGIEANTPYTVSNIENNLITLSNKKQHTITLSTTDLKDAHWDYSYTRTANMAQGATYKNVITAIKGRGQLTNIRRAYIDLTRASEHVKLYTDNEGTMIKQWLNNQDDKRSAIETNTLSTPKESITFNTAPLPKENPHYQDINGNLDMKIMAKKLNSELAMRAESLAIHLLGTPNKSKSDRDYLTFGIGKSALKVTLTGKHRGHFKDWTTGEKGNGINLIMAVENIGFKDALLHADTLLNQTKDNPLTLNPNHEKLTNTTPKFISELEARARQYQQEATPIKGTIAQEYLRNKGIIIDDHPSIKFHPKVYSSETRSNYPAIISTIENNKGQSNAIEITYLDNKGHTADLNIEKRVLGTKTKSNVVINEGSNTNISIITTTIEDALLINQHNNKDIDINTVNNKNDIQIMDKNTLRDNIIIVLNTKGETLNENNITKIMDNFTNHTVTFIDNAELQKQIDTEITKIEHGQLEIKNEVGNNLDMHKQENAIKQEDEHLLSSQSKFIKEQERKEENELMSKVSNINMDEKSTPDIDTNPQRLMELDRER
SIO_010081: VSAL_RS21825
subclass of: SO_0000673
so part of: VSAL_RS21825
location: 20545..26355
location: region:20545-26355:1
so has part: feature:20545-26355:1:exon

WP_012548859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20545-26355:1:exon

VSAL_RS21830
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21830
old locus tag: pVSAL840_22
old locus tag: VSAL_p840_22
so part of: sequence
location: complement(26399..26752)
location: region:26399-26752:-1
so has part: feature:26399-26752:-1:exon
subclass of: SO_0000010

position:26399:-1
position: 26399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26752:-1
position: 26752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26399-26752:-1:exon

VSAL_RS21830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21830
old locus tag: pVSAL840_22
old locus tag: VSAL_p840_22
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVNRVQVPIDGALKVTVDRYVEKQGGSRAQAVKFLAELGARLWDREDDDTPVEVSDREVLEEVLLLVRRNLMVSNVTHSQTFDSEEMIKNDVVAKALRDKFVDKAQVQQADFLAKE
SIO_010081: VSAL_RS21830
subclass of: SO_0000673
so part of: VSAL_RS21830
location: complement(26399..26752)
location: region:26399-26752:-1
so has part: feature:26399-26752:-1:exon

WP_012548860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26399-26752:-1:exon

VSAL_RS24145
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS24145
so part of: sequence
location: 26842..26976
location: region:26842-26976:1
so has part: feature:26842-26976:1:exon
subclass of: SO_0000010

position:26842:1
position: 26842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26976:1
position: 26976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26842-26976:1:exon

VSAL_RS24145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS24145
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWYKKAKRPKIMVQKWYKQKKNGSKVKQKVAQTWYKINVKTITY
SIO_010081: VSAL_RS24145
subclass of: SO_0000673
so part of: VSAL_RS24145
location: 26842..26976
location: region:26842-26976:1
so has part: feature:26842-26976:1:exon

WP_269447631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26842-26976:1:exon

VSAL_RS21835
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21835
old locus tag: pVSAL840_23
old locus tag: VSAL_p840_23
so part of: sequence
location: complement(27390..27827)
location: region:27390-27827:-1
so has part: feature:27390-27827:-1:exon
subclass of: SO_0000010

position:27390:-1
position: 27390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27827:-1
position: 27827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27390-27827:-1:exon

VSAL_RS21835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21835
old locus tag: pVSAL840_23
old locus tag: VSAL_p840_23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016800121.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MKLNILFLSVASLNVNAFCFEEAGRYYDVSPTLLTSIAMVESNLQADAVNENRNKRGEVVSVDYGLMQINSTWFSRLSRFGVSKDNLLNDACFNVHIGAWVLSQNFASHGYNWNSIGAYNAGFSAKNAAARARYIRKVQAALASL
SIO_010081: VSAL_RS21835
subclass of: SO_0000673
so part of: VSAL_RS21835
location: complement(27390..27827)
location: region:27390-27827:-1
so has part: feature:27390-27827:-1:exon

WP_012548861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27390-27827:-1:exon

VSAL_RS21840
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21840
old locus tag: pVSAL840_24
old locus tag: VSAL_p840_24
so part of: sequence
location: complement(27861..28256)
location: region:27861-28256:-1
so has part: feature:27861-28256:-1:exon
subclass of: SO_0000010

position:27861:-1
position: 27861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28256:-1
position: 28256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27861-28256:-1:exon

VSAL_RS21840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21840
old locus tag: pVSAL840_24
old locus tag: VSAL_p840_24
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMRIHNNKQRRMTHQSTYSFSDKLHYLKLLSRGISETQQNDINELKNTSLYQDIKSVFDGDGFCCFDLTSLYDVIINLNEKTTAHSWNICINSDSVIIHCRFNSVFPGIRFIKMNGHYYLKSFNYNMSGKY
SIO_010081: VSAL_RS21840
subclass of: SO_0000673
so part of: VSAL_RS21840
location: complement(27861..28256)
location: region:27861-28256:-1
so has part: feature:27861-28256:-1:exon

WP_012548862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27861-28256:-1:exon

VSAL_RS21845
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21845
old locus tag: pVSAL840_25
old locus tag: VSAL_p840_25
so part of: sequence
location: complement(28293..29294)
location: region:28293-29294:-1
so has part: feature:28293-29294:-1:exon
subclass of: SO_0000010

position:28293:-1
position: 28293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29294:-1
position: 29294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28293-29294:-1:exon

VSAL_RS21845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21845
old locus tag: pVSAL840_25
old locus tag: VSAL_p840_25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011979516.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MTHSTQAPASFSTPQSATKGQPLETEAHSKSDNFKSKPKSKGKKTKAKTDFYQIITDSIIASLECGVKPWACPWDMEGCSSMPYSLKSGAQYSGINVLLLWGAAVERGFTASAWLTYKQAIEMGGHVRKGEKGTTIIFYKQYTKEDKSTGDEESAFVMKTYTVFNLDQIDGIELAGGASMTSVQSLDFNAYAHVDEAIKATGAQIVEMGNKAFYRPSTDEIYLPPRERFNSEPDFYATTLHELTHWSGAKARLNRTKGKRFGDEAYAFEELIAELGSAFLMADFGLGGEVQHESYIASWLKALKNDKKIIFQAASAASKAHQYITQARECAAA
SIO_010081: VSAL_RS21845
subclass of: SO_0000673
so part of: VSAL_RS21845
location: complement(28293..29294)
location: region:28293-29294:-1
so has part: feature:28293-29294:-1:exon

WP_012548863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28293-29294:-1:exon

VSAL_RS23600
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS23600
so part of: sequence
location: 29539..29730
location: region:29539-29730:1
so has part: feature:29539-29730:1:exon
subclass of: SO_0000010

position:29539:1
position: 29539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29730:1
position: 29730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29539-29730:1:exon

VSAL_RS23600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS23600
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLALAVDLALALALSFDVAIRIVYQERRGRLSLLNYGITLSMGGACDEKPVKSPGDYYCLLAV
SIO_010081: VSAL_RS23600
subclass of: SO_0000673
so part of: VSAL_RS23600
location: 29539..29730
location: region:29539-29730:1
so has part: feature:29539-29730:1:exon

WP_158306899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29539-29730:1:exon

VSAL_RS21850
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21850
old locus tag: pVSAL840_26
old locus tag: VSAL_p840_26
so part of: sequence
location: complement(30133..30489)
location: region:30133-30489:-1
so has part: feature:30133-30489:-1:exon
subclass of: SO_0000010

position:30133:-1
position: 30133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30489:-1
position: 30489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30133-30489:-1:exon

VSAL_RS21850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21850
old locus tag: pVSAL840_26
old locus tag: VSAL_p840_26
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012550650.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNADIYIIYDILVSWDNPKTYSDLTNDYKNKSGEWHSPQSWAAPLGLLNQVLADAGAPALSALVVSQTTNEPGLHFWSSASNVPEKHNNPLKRHLIWQGILKQVFVYPWPSQLPAYNV
SIO_010081: VSAL_RS21850
subclass of: SO_0000673
so part of: VSAL_RS21850
location: complement(30133..30489)
location: region:30133-30489:-1
so has part: feature:30133-30489:-1:exon

WP_012548864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30133-30489:-1:exon

VSAL_RS21855
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21855
old locus tag: pVSAL840_27
old locus tag: VSAL_p840_27
so part of: sequence
location: complement(30649..31068)
location: region:30649-31068:-1
so has part: feature:30649-31068:-1:exon
subclass of: SO_0000010

position:30649:-1
position: 30649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31068:-1
position: 31068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30649-31068:-1:exon

VSAL_RS21855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21855
old locus tag: pVSAL840_27
old locus tag: VSAL_p840_27
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMRNEMINEQAYVPFSCVFNGDKMFNTMTLFTGDTSMYRHIYQVCLVKEDEAQLHVLGGFFIKTNVDRKDERYLSILLQCCSHLEAFDSALFLSLKLKIEGIQDINEEEGISLMKYQYQQLVNQGMISFKGSVHHYAEA
SIO_010081: VSAL_RS21855
subclass of: SO_0000673
so part of: VSAL_RS21855
location: complement(30649..31068)
location: region:30649-31068:-1
so has part: feature:30649-31068:-1:exon

WP_012548865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30649-31068:-1:exon

VSAL_RS21860
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21860
old locus tag: pVSAL840_28
old locus tag: VSAL_p840_28
so part of: sequence
location: 31361..31636
location: region:31361-31636:1
so has part: feature:31361-31636:1:exon
subclass of: SO_0000010

position:31361:1
position: 31361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31636:1
position: 31636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31361-31636:1:exon

VSAL_RS21860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21860
old locus tag: pVSAL840_28
old locus tag: VSAL_p840_28
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005481749.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MNKKDLVSHIADIADLSQQEATAALNATVESITNALKNGEEVTLIGFGTFKVNPRAAREGRNPKTGDTIQIAASNMPAFKAGKALKEAVNE
SIO_010081: VSAL_RS21860
subclass of: SO_0000673
so part of: VSAL_RS21860
location: 31361..31636
location: region:31361-31636:1
so has part: feature:31361-31636:1:exon

WP_012548866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31361-31636:1:exon

VSAL_RS21865
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21865
old locus tag: pVSAL840_29
old locus tag: VSAL_p840_29
so part of: sequence
location: complement(31792..32052)
location: region:31792-32052:-1
so has part: feature:31792-32052:-1:exon
subclass of: SO_0000010

position:31792:-1
position: 31792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32052:-1
position: 32052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31792-32052:-1:exon

VSAL_RS21865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21865
old locus tag: pVSAL840_29
old locus tag: VSAL_p840_29
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAENNDKSIWGSYGRGSVRHFRNDLRRTLIEGEWRDGSEFSDSPLFFGWSIKQIEKIMIDDASSIPELVMGAYDHYQCHKQLFDFY
SIO_010081: VSAL_RS21865
subclass of: SO_0000673
so part of: VSAL_RS21865
location: complement(31792..32052)
location: region:31792-32052:-1
so has part: feature:31792-32052:-1:exon

WP_012548867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31792-32052:-1:exon

VSAL_RS21870
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21870
old locus tag: pVSAL840_30
old locus tag: VSAL_p840_30
so part of: sequence
location: complement(32178..32468)
location: region:32178-32468:-1
so has part: feature:32178-32468:-1:exon
subclass of: SO_0000010

position:32178:-1
position: 32178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32468:-1
position: 32468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32178-32468:-1:exon

VSAL_RS21870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21870
old locus tag: pVSAL840_30
old locus tag: VSAL_p840_30
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016786731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRALLDETVLKFIDAKLSIEGRITSTEVIRAFGLGRQKISSLFTQYRGLCPNNMHHDVSLRCYVRGDKFKAKLLTNKTPEDYLQAVEVIFGEQEG
SIO_010081: VSAL_RS21870
subclass of: SO_0000673
so part of: VSAL_RS21870
location: complement(32178..32468)
location: region:32178-32468:-1
so has part: feature:32178-32468:-1:exon

WP_012548868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32178-32468:-1:exon

VSAL_RS21875
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21875
old locus tag: pVSAL840_31
old locus tag: VSAL_p840_31
so part of: sequence
location: complement(32491..32940)
location: region:32491-32940:-1
so has part: feature:32491-32940:-1:exon
subclass of: SO_0000010

position:32491:-1
position: 32491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32940:-1
position: 32940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32491-32940:-1:exon

VSAL_RS21875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21875
old locus tag: pVSAL840_31
old locus tag: VSAL_p840_31
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011263961.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIDQKISDYLPEHYPENQTCERVQGYFIGPKLRDDFDSTPNEERHSLELEHWFGRPYIDIEEFTFETYQDHVTRMGKFGIELEIESETEFYESQQQSKESWFTAWPTGKRFESRCLTGGAWDRSSTLGMFATLDEAIARCKQDIILFG
SIO_010081: VSAL_RS21875
subclass of: SO_0000673
so part of: VSAL_RS21875
location: complement(32491..32940)
location: region:32491-32940:-1
so has part: feature:32491-32940:-1:exon

WP_012548869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32491-32940:-1:exon

VSAL_RS21880
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21880
old locus tag: pVSAL840_32
old locus tag: VSAL_p840_32
so part of: sequence
location: complement(32930..33313)
location: region:32930-33313:-1
so has part: feature:32930-33313:-1:exon
subclass of: SO_0000010

position:32930:-1
position: 32930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33313:-1
position: 33313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32930-33313:-1:exon

VSAL_RS21880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21880
old locus tag: pVSAL840_32
old locus tag: VSAL_p840_32
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011263964.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKIKAGYLTEPPVTVEAFRNRPCSLPITDQNHVPPTPEEVRSLRQILGFTQSRVGALVGRSYNDKGCKAVRRWESNIESKEYRPINYSAWQLMLLAAEVIFLDEIIEASEQYRLGCHIKGEMNDDN
SIO_010081: VSAL_RS21880
subclass of: SO_0000673
so part of: VSAL_RS21880
location: complement(32930..33313)
location: region:32930-33313:-1
so has part: feature:32930-33313:-1:exon

WP_012548870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32930-33313:-1:exon

VSAL_RS21885
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: radC
locus tag: VSAL_RS21885
old locus tag: pVSAL840_33
old locus tag: VSAL_p840_33
so part of: sequence
location: complement(33384..33830)
location: region:33384-33830:-1
so has part: feature:33384-33830:-1:exon
subclass of: SO_0000010

position:33384:-1
position: 33384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33830:-1
position: 33830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33384-33830:-1:exon

VSAL_RS21885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: radC
locus tag: VSAL_RS21885
old locus tag: pVSAL840_33
old locus tag: VSAL_p840_33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006087368.1
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadC
translation: MFTENEKTTLAQAAAIIETKIRTTPELTTSDLAIEFCTNRLVHKEHEVFGILLLDNQHRLIEFVEHSVGTIDSASVYPREVVKLALHYNAAAVIFTHNHPSGIAEPSQSDRKITARLLDALALIDVRVLDHFVIGCGETVAFSKRGWI
SIO_010081: VSAL_RS21885
subclass of: SO_0000673
so part of: VSAL_RS21885
location: complement(33384..33830)
location: region:33384-33830:-1
so has part: feature:33384-33830:-1:exon

WP_158306900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33384-33830:-1:exon

VSAL_RS23490
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS23490
so part of: sequence
location: complement(33897..34280)
location: region:33897-34280:-1
so has part: feature:33897-34280:-1:exon
subclass of: SO_0000010

position:33897:-1
position: 33897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34280:-1
position: 34280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33897-34280:-1:exon

VSAL_RS23490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS23490
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTHSVAINSTITKETEAMQAKAGSSKNEIIQSKEQRIDPIPFFLGTVVLTQGINILCEGKHEAMDEFVKRHALCDWGTTAAEDGELNNEATHNGERIMSQYDFEGTTLWIVTDHDRRVTTILLPSEY
SIO_010081: VSAL_RS23490
subclass of: SO_0000673
so part of: VSAL_RS23490
location: complement(33897..34280)
location: region:33897-34280:-1
so has part: feature:33897-34280:-1:exon

WP_049940477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33897-34280:-1:exon

VSAL_RS23120
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS23120
so part of: sequence
location: 35016..35165
location: region:35016-35165:1
so has part: feature:35016-35165:1:exon
subclass of: SO_0000010

position:35016:1
position: 35016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35165:1
position: 35165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35016-35165:1:exon

VSAL_RS23120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS23120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001618166.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hok/Gef family protein
translation: MLKKSAVTSLVVICVTILIGLWLVRDSLCDVSYQSGGTILKATLAYESR
SIO_010081: VSAL_RS23120
subclass of: SO_0000673
so part of: VSAL_RS23120
location: 35016..35165
location: region:35016-35165:1
so has part: feature:35016-35165:1:exon

WP_083799329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35016-35165:1:exon

VSAL_RS21895
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21895
old locus tag: pVSAL840_35
old locus tag: VSAL_p840_35
so part of: sequence
location: 35695..36213
location: region:35695-36213:1
so has part: feature:35695-36213:1:exon
subclass of: SO_0000010

position:35695:1
position: 35695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36213:1
position: 36213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35695-36213:1:exon

VSAL_RS21895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21895
old locus tag: pVSAL840_35
old locus tag: VSAL_p840_35
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004748728.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hcp family type VI secretion system effector
translation: MPTPAYMSIKGEVQGDITKDAYSADSVGNTWQEAHIDQFLVQELDHVLTVPRDPQSGQPTGQRVHRPVIVTKQQDRCSPLLFNALVSGEKLPECSINFYRTSTSGKQEHYYTIKLIDALLVDVQTRMAHCQDAATSDRVTEEVLKFTYRAIEVTHETCGTAGDDDWRKPREA
SIO_010081: VSAL_RS21895
subclass of: SO_0000673
so part of: VSAL_RS21895
location: 35695..36213
location: region:35695-36213:1
so has part: feature:35695-36213:1:exon

WP_012548873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35695-36213:1:exon

VSAL_RS21900
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
gene: tssI
locus tag: VSAL_RS21900
old locus tag: pVSAL840_36
old locus tag: VSAL_p840_36
so part of: sequence
location: 36284..38548
location: region:36284-38548:1
so has part: feature:36284-38548:1:exon
subclass of: SO_0000010

position:36284:1
position: 36284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38548:1
position: 38548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36284-38548:1:exon

VSAL_RS21900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
gene: tssI
locus tag: VSAL_RS21900
old locus tag: pVSAL840_36
old locus tag: VSAL_p840_36
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012550059.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system tip protein VgrG
translation: MSKEIEFTFTVFGTAHEFRVESFHVVEELSRPFRVTLSLLSLDADIAFDGLSRKPALLTLMGQGMGNSRQFHGVVNEVRYLGVGRRFSRYQITLSPQLWFLTQRQDCRIFQDKSVIDIVTEVLDGGAVTDYRFELSAAYPPQEYVLQYRETDSHFVQRLLAEQGLWYYFEHSESNHTLVIVDKNDAIPEIISSPENASYMGPFVYQSEGGGNADREHVFELSTYHRVRTGHVTQTDYNYEQPRIPLQVEQQRDRDTDLAFFDYPGRYAEASQGQLQAVSLLADNHLESHQIEAESSIMRLTAGYSFELIRHSRKAINRDYTLLSVSHSGHNPQVHEEESSGLPTTYQNQFICLPRDVEFRSPTLSAPVVDGPQTAVVVGPAGEEIYTDKLGRIKVQFHWDRYGNNDEYAGCWLRVCQSMAGPTWGAVYLPRIGHEVVVTFLDGDPDRPLVTGTVYNGVNTPPYPLPENKTKTVFRTQTHKGEGYNEMSFEDEANQEQVYFHAQKDMRSKVLNNRFRTIGNDEALTVGRNQENTIKQDRKETIEGNKISITKQTFTETIEQDVKVSYNANMEKNVVAKQTLEVHGDRNSTVGKNDELTISGDKSTITMGARSSDISADDTLTVGKLLTVEVGSNASMKSDGEYTIISADEINATVGSSGFILKNNGTITLYGSNITIDGSGSVALVGGSVAINPGAAASQSSSVSVNPPRTFSMSPLASTKPVMNSSVYSEMVQEGSIIKELCQCGQGDICKLHS
SIO_010081: VSAL_RS21900
subclass of: SO_0000673
so part of: VSAL_RS21900
location: 36284..38548
location: region:36284-38548:1
so has part: feature:36284-38548:1:exon

WP_012548874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36284-38548:1:exon

VSAL_RS21905
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21905
old locus tag: pVSAL840_37
old locus tag: VSAL_p840_37
so part of: sequence
location: 38530..39123
location: region:38530-39123:1
so has part: feature:38530-39123:1:exon
subclass of: SO_0000010

position:38530:1
position: 38530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39123:1
position: 39123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38530-39123:1:exon

VSAL_RS21905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21905
old locus tag: pVSAL840_37
old locus tag: VSAL_p840_37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012550060.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4123 domain-containing protein
translation: MQTAQLNKQWRVNGIEVPVFGEEEILYAVIEPELWPEWNVELSPHTHELEIVNLFNATPFSVIKNGPVVINITSAQVLLNICIKKMSTTHCGALFHTASTTSCSQLMYSLRNALVVKKGVGDLFLRYYDPRGLLPLVASLSDEERRDYFSPINKITWFNKRWLSVSVLAPISAPFSDYQWNMTELHLASMTSISTQW
SIO_010081: VSAL_RS21905
subclass of: SO_0000673
so part of: VSAL_RS21905
location: 38530..39123
location: region:38530-39123:1
so has part: feature:38530-39123:1:exon

WP_012548875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38530-39123:1:exon

VSAL_RS21910
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21910
old locus tag: pVSAL840_38
old locus tag: VSAL_p840_38
so part of: sequence
location: 39139..41583
location: region:39139-41583:1
so has part: feature:39139-41583:1:exon
subclass of: SO_0000010

position:39139:1
position: 39139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41583:1
position: 41583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39139-41583:1:exon

VSAL_RS21910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21910
old locus tag: pVSAL840_38
old locus tag: VSAL_p840_38
inference: COORDINATES: protein motif:HMM:NF013630.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysM domain-containing protein
translation: MNPSYIVQRGDTLLNIAINNDVAFTTLLKLNPQYQPNPDLIHVGDSVRLPEVLNDEVVKQGYLIEPVRPRPVSDTCTLMSPPVCQPKEVHDILFVTGEHKTDFYCVGEKAHQFVKEEVKETDKLIKGYVELLNATPNEESATKEQVALHAKKRQAWLEAASYAGAIHLSESSLDRQSQRNEARRQTNEKNNENAEFIETQISELKKAKAFVTNYDENGFYVDNVSVGALRSEALVRIDTDLGLLRQQQLIIVQKSAEKAQSKPSPIKPNNQSVNHANIKGKNKLKRHSIEVFSVLENKYIYIRADFFDREREHWRQLPDRTNTRQAFIDNNKKGVMKAVVKDISADIRSNIKEGPLKNQIAKWDAKGWNWLESKKEYNLWGEGDNTKIAVSYEAQLLRWGANAAATIDKTGIAIGGDASVSLAEASVKIEGFLPYKGGYAAKLTYTDANKKTATYAFGCFRLKGEMQLSAFAGGMVSAGASAGKIPQGDGSIGAMYSPNVAIATSNSSGQVGLKVGGFAGMQVGGKVTGSAEWQAPPNVKESTHIDFQKLAEISGEGNIAGGLGAGVDFQLAFREGAFYFACSGRLVCGPGGSGSFASLINLEQLWELAKVILQGLQWVGYRLLENIDEEAYNYLIKASYLAFTSELLCKEPIQALQYAVKSGEEVIIGLWDERKETMDRQKEAEILSKRIISEEVFSGVPSDQLLPEVVGMMLNTLVEDFTLRSEESQETAICYLLKKTIYSWRKFEEILSRMNDFGTREAGYEKLFANLKRINTVLDGEQQREFNGWVYRLAKAKKQSELMSMPFTPKAEIS
SIO_010081: VSAL_RS21910
subclass of: SO_0000673
so part of: VSAL_RS21910
location: 39139..41583
location: region:39139-41583:1
so has part: feature:39139-41583:1:exon

WP_012548876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39139-41583:1:exon

VSAL_RS21915
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21915
old locus tag: pVSAL840_39
old locus tag: VSAL_p840_39
so part of: sequence
location: complement(41661..42728)
location: region:41661-42728:-1
so has part: feature:41661-42728:-1:exon
subclass of: SO_0000010

position:41661:-1
position: 41661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42728:-1
position: 42728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41661-42728:-1:exon

VSAL_RS21915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21915
old locus tag: pVSAL840_39
old locus tag: VSAL_p840_39
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009841963.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SUMF1/EgtB/PvdO family nonheme iron enzyme
translation: MKKKWLGLACLLPLLSGCNDANSSISASSETVSKQQIDTIITNIKKLYPDASNELKQHTLNTAIRAIENLVFVKGGSFEMGDFRAPCEIPSGTINRIDWAPDSQCFASPSSTTTGANNIHKVTLDSYSMSSYETSFMDMEWMRQINGLPVAADNMADGGIIKRHSDRYKKVIQYRKNQAARTINWHEAKNYCQWLSNLTALPFDLPSEAQWEYAARNRGEKRYYATNNGYRQLLGSGYNNPSTGYRVNYTDEEANSSTEREAYIGRWPANPLGVYGMSNNISEWVNDWYSPTYYQESPEHNPRGPKTGKEKIMRDAGGATMTFARIPKNIEVDRYYSSNSFRCSLQKETPETSRN
SIO_010081: VSAL_RS21915
subclass of: SO_0000673
so part of: VSAL_RS21915
location: complement(41661..42728)
location: region:41661-42728:-1
so has part: feature:41661-42728:-1:exon

WP_012548877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41661-42728:-1:exon

VSAL_RS21920
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21920
old locus tag: pVSAL840_40
old locus tag: VSAL_p840_40
so part of: sequence
location: 43036..44232
location: region:43036-44232:1
so has part: feature:43036-44232:1:exon
subclass of: SO_0000010

position:43036:1
position: 43036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44232:1
position: 44232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43036-44232:1:exon

VSAL_RS21920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21920
old locus tag: pVSAL840_40
old locus tag: VSAL_p840_40
inference: COORDINATES: protein motif:HMM:NF025001.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MNQQDTLTTIRSLANVSKRISIAETELKLTGDAPNQLYYRTYNLNEACEACRNVDHRKLKEVLVELGYNPKFCFPIDSLLLEKIRNKLLPERSKKRSTKAVVYAFSNFKGGTCKTTSCVTLATGLCTEIFDRELRVGVIDLDPQGSSTTFLRPNITDDDYSIGEILKQEYELEEGETLARFVNECFLDTQIPNLRILPARPMDRSYEAQVLREQFNAEQTKKHYAPHLELKKIIDAVSEQFDVIMIDCSPNFGTSVIAAHYVATSLIIPVRPSELDKDSSVKYFEFLEDIYSTVLCGFDHNGYDHINVLPTAVNENSSTEITIASTLRIGANNNCFQGNFLHSEAVSNLSARHQTIFGESKSQYNATKKTLQRAQLSTYSLIVALYEQIQSTEFKREA
SIO_010081: VSAL_RS21920
subclass of: SO_0000673
so part of: VSAL_RS21920
location: 43036..44232
location: region:43036-44232:1
so has part: feature:43036-44232:1:exon

WP_012548878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43036-44232:1:exon

VSAL_RS22510
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22510
old locus tag: VSAL_p840_41
so part of: sequence
location: 44232..45239
location: region:44232-45239:1
so has part: feature:44232-45239:1:exon
subclass of: SO_0000010

position:45239:1
position: 45239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44232-45239:1:exon

VSAL_RS22510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22510
old locus tag: VSAL_p840_41
inference: COORDINATES: protein motif:HMM:TIGR00180.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MAKKKTKTNAQIAEEAAMLAGVSTSTYQKSIQHVEKLQQAFEGGRSNLTLTFGERNVKFELRTLPNAVIETETIVSKENERSQNFVSRLSVIKLTQAIEKEGQKYPAIGQISGELIEILDGSQRRSACYYAGHDLLVWVTKEQLDNETKRTTSVTANTYKPLSLIEKGKQYQNLINEGTYNNPTQLATALGLNRGLVSECLKAASLPDWLIDIIPSPSDLGRPTIIKLSKFINELDENELSEVVLLATNLKEKTEQLRLNAIDADKVNGDVVQMIMSINNKKSIVSKVAFTSLTDGSRAKAILDNGDLMLNIKNVGDECLAELKDILAKYGLPSI
SIO_010081: VSAL_RS22510
subclass of: SO_0000673
so part of: VSAL_RS22510
location: 44232..45239
location: region:44232-45239:1
so has part: feature:44232-45239:1:exon

WP_012548879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44232-45239:1:exon

VSAL_RS21930
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21930
so part of: sequence
location: complement(45392..45667)
location: region:45392-45667:-1
so has part: feature:45392-45667:-1:exon
subclass of: SO_0000010

position:45392:-1
position: 45392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45667:-1
position: 45667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45392-45667:-1:exon

VSAL_RS21930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLTFNNPVKNNRTSITLSNNMIRLWATINHYDTDSDDFMLEAQFKSDINELICDLANSYAKTISNFPTFVSYVENYMIIEAESTIKKLKM
SIO_010081: VSAL_RS21930
subclass of: SO_0000673
so part of: VSAL_RS21930
location: complement(45392..45667)
location: region:45392-45667:-1
so has part: feature:45392-45667:-1:exon

WP_044583686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45392-45667:-1:exon

VSAL_RS21935
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21935
old locus tag: pVSAL840_42
old locus tag: VSAL_p840_42
so part of: sequence
location: complement(45731..46276)
location: region:45731-46276:-1
so has part: feature:45731-46276:-1:exon
subclass of: SO_0000010

position:45731:-1
position: 45731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46276:-1
position: 46276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45731-46276:-1:exon

VSAL_RS21935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21935
old locus tag: pVSAL840_42
old locus tag: VSAL_p840_42
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017085672.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLLGYARVSSKEQSLDIQIKQLQELGCDKIFQENASGNDSERTQLNAMIDFSRDGDVIHIMKVDRLARNTIDALKIADQLATKGAGLVFHDLGNLDINSDVGRIIYTTISAFAELERKRILGRCNEGREQAKEEGRHLGRFPNKTLHNRIKELASEGMNKNAISKELGCSRTTVYSILNKN
SIO_010081: VSAL_RS21935
subclass of: SO_0000673
so part of: VSAL_RS21935
location: complement(45731..46276)
location: region:45731-46276:-1
so has part: feature:45731-46276:-1:exon

WP_012548880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45731-46276:-1:exon

VSAL_RS21940
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21940
old locus tag: pVSAL840_43
old locus tag: VSAL_p840_43
so part of: sequence
location: complement(46692..46892)
location: region:46692-46892:-1
so has part: feature:46692-46892:-1:exon
subclass of: SO_0000010

position:46692:-1
position: 46692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46892:-1
position: 46892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46692-46892:-1:exon

VSAL_RS21940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21940
old locus tag: pVSAL840_43
old locus tag: VSAL_p840_43
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552314.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAFKVKYLNSKKELLHCESIFMKNIGAAKRSSSSMAPMNTESIEIYDVGEKWLATKELGKWKSIE
SIO_010081: VSAL_RS21940
subclass of: SO_0000673
so part of: VSAL_RS21940
location: complement(46692..46892)
location: region:46692-46892:-1
so has part: feature:46692-46892:-1:exon

WP_044583687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46692-46892:-1:exon

VSAL_RS21945
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21945
old locus tag: pVSAL840_44
old locus tag: VSAL_p840_44
so part of: sequence
location: complement(46932..47567)
location: region:46932-47567:-1
so has part: feature:46932-47567:-1:exon
subclass of: SO_0000010

position:46932:-1
position: 46932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47567:-1
position: 47567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46932-47567:-1:exon

VSAL_RS21945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21945
old locus tag: pVSAL840_44
old locus tag: VSAL_p840_44
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552308.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MYIFGYLRASTKEQDAKRAQDSLKVFIEDKGARIAGWYIENVSGASLQRPELMRLLQDAEKGDAILIEQVDRLSRLNDDDWETLKELINKKQLKVISLDLPTSHAVLMKHQSDDFTSAMFRAINNMMLDMLAAIARKDYQDRRRRQAQGIDKAQEEGKFKGRRPDLEMHEKIIQLRVHNELSINSTAKLVGVSARTVIRIVKQYKEEMGPI
SIO_010081: VSAL_RS21945
subclass of: SO_0000673
so part of: VSAL_RS21945
location: complement(46932..47567)
location: region:46932-47567:-1
so has part: feature:46932-47567:-1:exon

WP_012548882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46932-47567:-1:exon

VSAL_RS21950
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21950
old locus tag: pVSAL840_45
old locus tag: VSAL_p840_45
so part of: sequence
location: complement(47865..49046)
location: region:47865-49046:-1
so has part: feature:47865-49046:-1:exon
subclass of: SO_0000010

position:47865:-1
position: 47865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49046:-1
position: 49046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47865-49046:-1:exon

VSAL_RS21950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21950
old locus tag: pVSAL840_45
old locus tag: VSAL_p840_45
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012548883.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS91-like element ISVsa21 family transposase
translation: MYDPNHFKHLFTLGRCFYKAYKDNYPFRTVELEAVVKYLSCKTDRLGKLTYSCRNNACSHVKYVFSTCKSKLCPSCGQKATERWIAAQSEILPDCKFRHITFTMPGQFWPLFQLNRWLLGDLFSISANTLLTQAKTKKLTIGIFAALHTYGRKLNFNCHIHLALAELGLDKHENLKKFSFKFASLMKQWRYGIIKLLRDNYDRLIFPSELSDEAKNTQSWNGFLNTQYNRHWNVNIAKKTSHKKHTAKYLGSYVKKPPIAASRLKEYANGEVTFTYLDHNSKKHKELSLTQTEMMLRVLSHVPEKYFKMIRYFGFLSTRLRGDMLPIIYEKLEQKVNKPMVFSFASMMKALMKVDPFECILCGSKMFFSGFIRGPKLGQLVSSIENLALLRPM
SIO_010081: VSAL_RS21950
subclass of: SO_0000673
so part of: VSAL_RS21950
location: complement(47865..49046)
location: region:47865-49046:-1
so has part: feature:47865-49046:-1:exon

WP_012548883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47865-49046:-1:exon

VSAL_RS23125
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS23125
old locus tag: VSAL_p840_46
so part of: sequence
location: 49322..51541
location: region:49322-51541:1
so has part: feature:49322-51541:1:exon
subclass of: SO_0000010

position:49322:1
position: 49322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51541:1
position: 51541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49322-51541:1:exon

VSAL_RS23125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS23125
old locus tag: VSAL_p840_46
EC number: 3.2.1.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012548884.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pesticin C-terminus-like muramidase
translation: MKVDDRKFVNAYYPWNEELAREAKADTPHHEPIKEKPVATAAFEYSIEIACTLDELNTYQVGAFSLGKTKEEESISLWTKSQTDKGFSLLTASVKVNEPKSLTREFFISSGHCLTFNDVSPVKKGSGTHAKSFVPIKPSIQIYDRLAWPKVGFFYHFINDELENEYPLSGGDKWSFKVTYSKGKVLSSDLLSEHEYAFILLPWKINNTVISRQHLLYTKEKMTQEQLSEINAQWLDESACLINPDEVVTARSDKIVMREQEDNGRITYTVQSGDTFGLIAKKQGITYNGLLTLNPQITNPDLIQVGDVVTIKDTPPEQESIQFHVCKINSETGQRETWGEIAEQHGMGAKELYDLNADNPMHKDGALALDNELRVKNTAQSEAPDVVYRNAQSPEDVSGDKWVFSFANVWSVIEKPFSDVAHMFVQDDTALNKNTSVIKVNSIRLHSKILSDSDGLEAIAQEKKGAIKKGDKDAPKSNEIKTIQEALLTLNFDLGKYGADGDFGSGTEQAVIDFQREFVPTHEVHPEYEMKKSDGVVGNQTLLALDEAVTIKWKYVRKCKLMIDHHFIQLLEGTKKEGYVPMPDKSQSGVTIGSGFDLGARNVNDLISMGLPESLVEKFTPYLGLKKYEAVNKLKALPLSLTEADLSIVEATVKKSETDKIIKLFNSSSKVKFECLPANAQTVVASVAYQYGYLPRRAEKFWEQAINQDWNGMYDNLMAFGDDFEVRRHKEAKLIKEIL
SIO_010081: VSAL_RS23125
subclass of: SO_0000673
so part of: VSAL_RS23125
location: 49322..51541
location: region:49322-51541:1
so has part: feature:49322-51541:1:exon

WP_012548884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49322-51541:1:exon

VSAL_RS21960
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21960
old locus tag: VSAL_p840_47
so part of: sequence
location: 51541..51930
location: region:51541-51930:1
so has part: feature:51541-51930:1:exon
subclass of: SO_0000010

position:51930:1
position: 51930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51541-51930:1:exon

VSAL_RS21960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21960
old locus tag: VSAL_p840_47
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLLLLMYVFSCSVSAFPMKDIYNNLDITSFNSSLMPLRKGEERTFKDFNKKLPTPIFSEKNILLDDDYWTYSLTVIKASSDNDYYVCFKDKAKMGTYDSQKPMIIRKYERYYVAISSSSNVCDDYAK
SIO_010081: VSAL_RS21960
subclass of: SO_0000673
so part of: VSAL_RS21960
location: 51541..51930
location: region:51541-51930:1
so has part: feature:51541-51930:1:exon

WP_012548885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51541-51930:1:exon

VSAL_RS21965
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21965
old locus tag: pVSAL840_48
old locus tag: VSAL_p840_48
so part of: sequence
location: complement(52192..52560)
location: region:52192-52560:-1
so has part: feature:52192-52560:-1:exon
subclass of: SO_0000010

position:52192:-1
position: 52192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52560:-1
position: 52560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52192-52560:-1:exon

VSAL_RS21965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21965
old locus tag: pVSAL840_48
old locus tag: VSAL_p840_48
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012548941.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKLFDVVNNGITGIVNNACNNQAIATPLSQNAFFPMAYMGEMMSRNDMPMKMHDFAARCINLVGLGCKIMNTHQSDFTNTDTYFLCKTFISNVCDELEMPNNDYQRKYWLEQINNNLLSDS
SIO_010081: VSAL_RS21965
subclass of: SO_0000673
so part of: VSAL_RS21965
location: complement(52192..52560)
location: region:52192-52560:-1
so has part: feature:52192-52560:-1:exon

WP_012548886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52192-52560:-1:exon

VSAL_RS21970
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21970
old locus tag: VSAL_p840_49
so part of: sequence
location: 53205..54152
location: region:53205-54152:1
so has part: feature:53205-54152:1:exon
subclass of: SO_0000010

position:53205:1
position: 53205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54152:1
position: 54152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53205-54152:1:exon

VSAL_RS21970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21970
old locus tag: VSAL_p840_49
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: Abi family protein
translation: MPSSITYAPIFDLISEPRLRSFDVFFDEEASEMERYGAYIWSQNASAALYPLMQQLEILLRNSVDRVARKRFGDYWWDNISVDKTKSDWSNFNYGINNAIKKLERKWKKKERERLNLQAGAALPTPTPTFDHDDIVATTDFGTWKEIFISAHYTSELDEQNKYLWPKSMSKVFKRYDLLGSNTEEARVEFLRLINEIKDYRNRLFHHDCIWIKSKSTDQKSAIETIRHKINLLEKLIKVISPITHSTLSTWGVFYHARRICSWRELKIYLTFEQECSFTAAEVDSLSERFSSVSSHNATVSMDYNGVPFCIHKLR
SIO_010081: VSAL_RS21970
subclass of: SO_0000673
so part of: VSAL_RS21970
location: 53205..54152
location: region:53205-54152:1
so has part: feature:53205-54152:1:exon

WP_049940478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53205-54152:1:exon

VSAL_RS21975
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21975
old locus tag: pVSAL840_50
old locus tag: VSAL_p840_50
so part of: sequence
location: 54700..55974
location: region:54700-55974:1
so has part: feature:54700-55974:1:exon
subclass of: SO_0000010

position:54700:1
position: 54700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55974:1
position: 55974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54700-55974:1:exon

VSAL_RS21975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21975
old locus tag: pVSAL840_50
old locus tag: VSAL_p840_50
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017019111.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase
translation: MSVSEDFKQFLVNIRIDNSGNISNRYGQITKALNKQFRNTESTIANTLQVGSYGRYTGIKGISDLDMLYIMPDGKWDTYKDKQSQLLKDTKDAILSRYPTTDVKVDSLVVVVSYQNFKVEVQPVFEQDDGSFKYPYTHKDGSWRITKPKDEIKALKEVNEAKNYNLRPLCKMARAWKNKHGVAMGGLLIDTLAHNFLNNSDAYDNKGPHYYDEMCRDFFEYLSNLPKQERWNALGSNQHVKVKKNFQQAAKKAFDLCVEAINDSNNEKWRKIFGRGYPQSVENLAAIVENRQTWLDTEEFITDKYPVDIRYHMAIDCDVSQNGYREYSLSYMLRNFVPLRANKSLFFSVSEIEVPKPYLLKWKVVNRGPEAERMDCIRGQILDDSGYGNRSESTNFNGEHSVECYVIKDGVVVARSEITVPIAR
SIO_010081: VSAL_RS21975
subclass of: SO_0000673
so part of: VSAL_RS21975
location: 54700..55974
location: region:54700-55974:1
so has part: feature:54700-55974:1:exon

WP_012548888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54700-55974:1:exon

VSAL_RS21980
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21980
old locus tag: pVSAL840_51
old locus tag: VSAL_p840_51
so part of: sequence
location: 56084..56626
location: region:56084-56626:1
so has part: feature:56084-56626:1:exon
subclass of: SO_0000010

position:56084:1
position: 56084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56626:1
position: 56626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56084-56626:1:exon

VSAL_RS21980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21980
old locus tag: pVSAL840_51
old locus tag: VSAL_p840_51
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009696743.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SLATT domain-containing protein
translation: MLDQIRECYGRVVWTHKIHEKCADIINKRNNRLKFWQIVLSAITTTGIFAAVFGDISEIGYVSAIISLVLTILNTYVKKYDLGGLAQKHSDAASSLWNIRESYLSLITDINSGAIGDDDVRKKRDVLQATLNKLYKGAPNTDVGNAYRKASEALKYNEEFTFSDEEIDMFLPTSQRKIKK
SIO_010081: VSAL_RS21980
subclass of: SO_0000673
so part of: VSAL_RS21980
location: 56084..56626
location: region:56084-56626:1
so has part: feature:56084-56626:1:exon

WP_231850982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56084-56626:1:exon

VSAL_RS21985
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21985
old locus tag: pVSAL840_52
old locus tag: VSAL_p840_52
so part of: sequence
location: complement(57061..57801)
location: region:57061-57801:-1
so has part: feature:57061-57801:-1:exon
subclass of: SO_0000010

position:57061:-1
position: 57061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57801:-1
position: 57801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57061-57801:-1:exon

VSAL_RS21985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21985
old locus tag: pVSAL840_52
old locus tag: VSAL_p840_52
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012548890.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element ISVsa4 family transposase
translation: MTNPDFKWKHFAPEIILWCLRWYGSTPMSYANLSDMLAERGISVNRSTIYRWFIEYSPKLRKKLRRNYQFIKTDSSWQLDETYVKVKGKWHYLYRAINKQGETLDFYFSHKRNKEAAYQFLKRCLRYYDIDNQPKTLNTDKHSSYANAIARLKKEGRLREDVEQRQVKCLNNGIESDHAPIKKLIVAAGGFKLRKRAWSTIQGFESLRMLNKGQFDFWLRNDKRKTVVRERSAFINRLFNVEVIFE
SIO_010081: VSAL_RS21985
subclass of: SO_0000673
so part of: VSAL_RS21985
location: complement(57061..57801)
location: region:57061-57801:-1
so has part: feature:57061-57801:-1:exon

WP_012548890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57061-57801:-1:exon

VSAL_RS21990
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21990
so part of: sequence
location: 57825..58238
location: region:57825-58238:1
so has part: feature:57825-58238:1:exon
subclass of: SO_0000010

position:57825:1
position: 57825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58238:1
position: 58238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57825-58238:1:exon

VSAL_RS21990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21990
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWDLGVKLNFLQQPREERGLNIPPINMAGPIRTGDSSFSSTTEFGLQNIPSHNLRSYFNGGWKPSNIPENHFLSQFRHQFSKHFYESWSGAGFDEVQDPISKEWAYVYGATSASYYSPFYIFRSSYYRDWESHITAK
SIO_010081: VSAL_RS21990
subclass of: SO_0000673
so part of: VSAL_RS21990
location: 57825..58238
location: region:57825-58238:1
so has part: feature:57825-58238:1:exon

WP_148234228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57825-58238:1:exon

VSAL_RS21995
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS21995
old locus tag: pVSAL840_53
old locus tag: VSAL_p840_53
so part of: sequence
location: complement(58377..58655)
location: region:58377-58655:-1
so has part: feature:58377-58655:-1:exon
subclass of: SO_0000010

position:58377:-1
position: 58377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58655:-1
position: 58655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58377-58655:-1:exon

VSAL_RS21995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS21995
old locus tag: pVSAL840_53
old locus tag: VSAL_p840_53
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005497247.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family
translation: MIFWEEESLNDREKIFEFLHDFNPEAAEKTDKIIELKVNNLLEQPLMGIQRNGIRGRILIIPEISMLISYNVSDSTIQVMRVLHQKQKFPVA
SIO_010081: VSAL_RS21995
subclass of: SO_0000673
so part of: VSAL_RS21995
location: complement(58377..58655)
location: region:58377-58655:-1
so has part: feature:58377-58655:-1:exon

WP_012548891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58377-58655:-1:exon

VSAL_RS22000
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22000
old locus tag: pVSAL840_54
old locus tag: VSAL_p840_54
so part of: sequence
location: complement(58652..58936)
location: region:58652-58936:-1
so has part: feature:58652-58936:-1:exon
subclass of: SO_0000010

position:58652:-1
position: 58652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58936:-1
position: 58936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58652-58936:-1:exon

VSAL_RS22000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22000
old locus tag: pVSAL840_54
old locus tag: VSAL_p840_54
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011218237.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-damage-inducible protein J
translation: METRIQFRVAEETKHLAQQMAESQGRTLSGACRKLIEQLAEQQRKAMTHDTWLSEQINTAFKKIDSGEANFIEQQHANSQMEHRKNKIRNRGLS
SIO_010081: VSAL_RS22000
subclass of: SO_0000673
so part of: VSAL_RS22000
location: complement(58652..58936)
location: region:58652-58936:-1
so has part: feature:58652-58936:-1:exon

WP_012548892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58652-58936:-1:exon

VSAL_RS22005
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22005
old locus tag: pVSAL840_55
old locus tag: VSAL_p840_55
so part of: sequence
location: 59510..61699
location: region:59510-61699:1
so has part: feature:59510-61699:1:exon
subclass of: SO_0000010

position:59510:1
position: 59510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61699:1
position: 61699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59510-61699:1:exon

VSAL_RS22005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22005
old locus tag: pVSAL840_55
old locus tag: VSAL_p840_55
inference: COORDINATES: protein motif:HMM:NF013126.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 3 N-terminal domain-containing protein
translation: MFRITQFALMYLLSLPLLASSLTPLADDYIEKNGLRKSAAQLLVTGIVADYNNFSYNKKTQELLNLNVGGIIINAYNVPVPHNTNNRNHAIQIIKDFTNSIRSVHVDGSDLLIAVDFESYRYTSLRYPLIAPPSALTLSANNSTKSAFNAGDDAGRQLENVGVNVILGPVLDKDSKLQGTRNTNLMNRSFGSDSKVISVFASEFIRGVSNNRVATFAKHFPGYGFVDSNPHNDDKVDINAPRKTIIEDLKPFSNTSSLLSGVMTSHLYINKSNRPLTVSKSNLDLLINNEHLNSLREKIIITDDISGMASIQQYRNDDGISNSRLVLNAFKAGHDLILISHLEHHSNNKFTVSDVRESIDELEKYVRTKNGLSQLKVSLEKILFLKKKVSLKKQAVNLVNADYLKVIESRNLEIYKNGTINVSSSDVDTNTNFMDFVNSENKVYIVGNSRYFDSIQHNIPASKSVVYTDINELKRGSTKGAVLINKIGLKLSKTVADGNYLVFLVSSLDSYNILESLRLHNTDPSRVLVSVHGSPLPIKTATLLNYKIVTNFDYSPSSAYPLGLILNGHLNPGNLHKSPLELGNGAIFKLSDRMDIEHSGSDSDLTKKISKEGENNLNVKFWLLILPVSLIFGSKIISMSIFSCHAKKSPDLDSRRTFWREALVSKAYFKRKIAILALLFLGFIAIPIFISSPGDFSYIVTSSDYVFETSTVKNIVDILMYVDKFLVKL
SIO_010081: VSAL_RS22005
subclass of: SO_0000673
so part of: VSAL_RS22005
location: 59510..61699
location: region:59510-61699:1
so has part: feature:59510-61699:1:exon

WP_012548893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59510-61699:1:exon

VSAL_RS22010
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22010
old locus tag: pVSAL840_56
old locus tag: VSAL_p840_56
so part of: sequence
location: 62129..64735
location: region:62129-64735:1
so has part: feature:62129-64735:1:exon
subclass of: SO_0000010

position:62129:1
position: 62129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64735:1
position: 64735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62129-64735:1:exon

VSAL_RS22010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22010
old locus tag: pVSAL840_56
old locus tag: VSAL_p840_56
inference: COORDINATES: protein motif:HMM:NF019313.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antiviral RADAR system adenosine triphosphatase RdrA
translation: MLKAIHLDLDKSEFFDSYNDDEFWQRNAKNTLIDMLISTCKDAQDYRQSRLNNKNKISAAHNAICISGSRGAGKTVFLRNAKKIWEEAKLDNIEKINISNLYFAETIDPTLLNGHDNFANVIIAQLYNAVENKLSSPHIDVMKKNNFYTSLKKLAESLGKKSDFADHTGIDRILKYRSGIQVEAFFHKYVENCVELLGCQAIVVPIDDVDMALNRAVEVLDEVRRLLSCPYIIPIVSGDHELYSHMVRVHFEKNATDNKSISEETTRSGHKIGKLLADSYLTKVFPNHLRLPLLAIDRLLPHLLIKEKGISNKGISFVKYEKMLTHVFFYLCNGEERSTEYPKPESAREVTQLIKALTPLKLQEFQKHDLWNTFKSWAEQKHHGATYTNAVSISQLSDYNSEETIFRFDQLLAFNPISQVKESIPWAIKPFLSEQEIAIRDLYGKSVKKKDLSENDNVNIINSVFTHDMKILRSMPPLELYSSDMTLTIDTVKKDETNLLLAVYTHRDFYGKQGNRSYNIFFSRAFEILSVSLLSVSTNIQVANWEAQLDEIIARVPFYSIHAINPTKYLEQEGEDLTLAESVVSENINETYKTSPLALKIKDWEVASKEKLSGLNNLSILPLIHSVFNKVFTQLHILRTEISTTKKYPEEYLSDTARRFEYIVINAFASLLKDDYVIQANVAIGAQLKTLRDHKEFMRVDRTLYRNIKGMIDETVNLDTPILIEKKSSTAKPKEDIGSILLEIIWAHPIFVNLNNSKILMDEPKFQFTFYSAPPITPSIVVTSVSLNSLKEFKHILRKENINMSTKDITTWGFNNRIKALEIYNSAQKELKDTGSELKKGSEQKRMFDALKKVVGTPDLRELLRDNS
SIO_010081: VSAL_RS22010
subclass of: SO_0000673
so part of: VSAL_RS22010
location: 62129..64735
location: region:62129-64735:1
so has part: feature:62129-64735:1:exon

WP_012548894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62129-64735:1:exon

VSAL_RS22015
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22015
old locus tag: pVSAL840_57
old locus tag: VSAL_p840_57
so part of: sequence
location: 64735..67281
location: region:64735-67281:1
so has part: feature:64735-67281:1:exon
subclass of: SO_0000010

position:67281:1
position: 67281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64735-67281:1:exon

VSAL_RS22015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22015
old locus tag: pVSAL840_57
old locus tag: VSAL_p840_57
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: antiviral RADAR system adenosine deaminase RdrB
translation: MFISDIKWVIPAAIMSSDRLLNEDMNMLNAQSYGEDKYTILLQRAVFDFQPYTHTLLRNEDVEYAIDEWINDKQCVDLLDCLNNLFHHFLVWKGNCFEVKQEHLEEWLSFCSLTDPTWIIAVGYQHLIQQEILSDAEVIELVSENQCPVALPKASLNNYIADNHIHLGGHGSTALSMLNFAVYLNKKPDNNKINWPRRPENTLFESDKLSKNHLPLLINKLAESLGENIFKGSSTISRHPHTWGGLDSCTLNQSLLADLKRTYFDTSAQKLLASSHLKQQQSANRWLLFCIGLLEPTKHRDTCYQTTLNCFIRTSNILRNYMVVSGVGLGQFVEYFGFDHRKPKITTKCSGLEHKSHGIKYDNSPLTMREFRISPDDIVVKDDEYGFQLLPTSLEHLANMINDDNIASNSHFVIHFNRTYPNYKNRLDKHLHFFRYELKQQVEKIQQFSASVTYSDIELKSAHNNIDLRKLIRGYDVAGNENQLPIEIFAPTLRVLRAARYTTNGVFGKRLPQPFLTIHAGEDFSHIVSGLRAIDESIEFCKFTHGDRIGHGLALGINVKHWAQRQQRAYLTAGEHLDNLVWCHHQALSLIQINHTFQSALSLLEHKIRHWSSYLYGGVVYTPNDLYQSWMLRRNCPNQLSLALRDGNSEWVDWVPDIEFLKKESSSLVKKLWILYLNSGHLDLTSKRNDVISISCSIDDRTVPSSHNNKLSDNLSKSEIDLYEAIQDLLMERYSNKGIILEACPTSNLYIGRFKKYHEHPIFRWNPPNPDWLKPGEKFNRFGLRKGAVPVCVNTDDSGLMPTTIDNEHRVIKLAAIIHYNIGTCRAEEWITSIRQKGVDIFQQNHLN
SIO_010081: VSAL_RS22015
subclass of: SO_0000673
so part of: VSAL_RS22015
location: 64735..67281
location: region:64735-67281:1
so has part: feature:64735-67281:1:exon

WP_012548895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64735-67281:1:exon

VSAL_RS22020
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22020
old locus tag: pVSAL840_58
old locus tag: VSAL_p840_58
so part of: sequence
location: complement(67397..69208)
location: region:67397-69208:-1
so has part: feature:67397-69208:-1:exon
subclass of: SO_0000010

position:67397:-1
position: 67397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69208:-1
position: 69208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67397-69208:-1:exon

VSAL_RS22020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22020
old locus tag: pVSAL840_58
old locus tag: VSAL_p840_58
inference: COORDINATES: protein motif:HMM:NF039446.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNNTLIHQTLHGYSNGHKLLASSIELDHNIKNILLRESDSPGQEFHQDNNICYSGYPLVDFGYYVLSKTWVAKEIERPGCVWSHSILIPFTILAHKNLLTYFNPYDHFINKDVTSDLSINLKPIPFDITHVNDRNNTKDLSLAFSQIFSTRDQTIISNNRISVFDILVMWEKLWPRLRRSFSFKTWSPKNSISRSYYQKYDLLLNDDVSENIQIDNWAKCIFLKHDGVNMFMWKHGASLDQNKVNVYYLLTCWSLLKRKEFDELSRFILKWKKAPISLIKEISKILAPRDITKSVAYFISTYILIINSDDISDKTLNEVGSLLFSIDPEFLIKIINSNTEHSKNISINKITDLPIELVSKLYNEGVYLDIDICEPEIISNTYFWEHNYNNSIFEVIIKDVKLNRLIPINSILPSSLPLDDISKPNLLEILSDSFDSLNENWINYLLVNQELLSLTLLVQSEKNTKLGYFIISKFNLNIIKNIPDNIITDLYRTSTKDKSIIYKIALLLTEKSDEIYLNLLKISFDDICYLLSKHELDYFEIKKLKNNIKKEVTKFSFYSLRQMFIIYSSHYAIKNNIPIESITLYKGNKIDLYKEFKIDDDV
SIO_010081: VSAL_RS22020
subclass of: SO_0000673
so part of: VSAL_RS22020
location: complement(67397..69208)
location: region:67397-69208:-1
so has part: feature:67397-69208:-1:exon

WP_012548896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67397-69208:-1:exon

VSAL_RS22025
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22025
old locus tag: pVSAL840_59
old locus tag: VSAL_p840_59
so part of: sequence
location: complement(69201..70049)
location: region:69201-70049:-1
so has part: feature:69201-70049:-1:exon
subclass of: SO_0000010

position:69201:-1
position: 69201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70049:-1
position: 70049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69201-70049:-1:exon

VSAL_RS22025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22025
old locus tag: pVSAL840_59
old locus tag: VSAL_p840_59
inference: COORDINATES: protein motif:HMM:NF039436.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNINPQESKVIFCGLPSSGKTSFLGALSYLAENDEVDKDLELAVLPKERLFFNELADKWVSCEPMLRTKISSSDKIEMTLKKSNQHFSIEMPDLSGETWSELWTEHKMDNQLISFLNKTSCVIFFIHVDELIVPMSICDEASIIKGESADHKDNNTKWNPSEHTPTQSIVIDLLRKLSTLLADTDKKLAIVLSAWDTLPNGSVPMSFLKKELPLLSQYLNCKFDYEQIKVFGVSAQGGSLNTPENQDILLSEDEPSKRIKITQDGIEYSADLTKILSWLINE
SIO_010081: VSAL_RS22025
subclass of: SO_0000673
so part of: VSAL_RS22025
location: complement(69201..70049)
location: region:69201-70049:-1
so has part: feature:69201-70049:-1:exon

WP_012548897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69201-70049:-1:exon

VSAL_RS22030
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22030
old locus tag: pVSAL840_60
old locus tag: VSAL_p840_60
so part of: sequence
location: complement(70039..71070)
location: region:70039-71070:-1
so has part: feature:70039-71070:-1:exon
subclass of: SO_0000010

position:70039:-1
position: 70039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71070:-1
position: 71070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70039-71070:-1:exon

VSAL_RS22030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22030
old locus tag: pVSAL840_60
old locus tag: VSAL_p840_60
inference: COORDINATES: protein motif:HMM:NF040097.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase
translation: MKCNNQNCNYDIDNICIDGLTSEDCPNLVDFSQLELVTPDSITEVDDRGVYTDTLNAQQSGATEKTLFPGQIPLSIDEVQTRLKDRLGKIVSFIGPVGVGKTTLISSLYDVFSKENETQVLFGGSDTLYAFESSCHHARVTSRGSTVSTPRTSSTEGVGFYHLSIQDSKKIRQEFFLADRSGESYSEMVNNLSLVDSFEELLRSDLLLFMVDSSSLVDNKQRHRARRTTIKLIQSLFEYNTLPKNTNCAIVLTKFDLVVEENNETVCMSEAKRIVDDVQKYLDTPIDILSISARPNSEGHARPDFFKILWQKLESSQRPQKKCPLNKYKTNRSFHNLELMYEY
SIO_010081: VSAL_RS22030
subclass of: SO_0000673
so part of: VSAL_RS22030
location: complement(70039..71070)
location: region:70039-71070:-1
so has part: feature:70039-71070:-1:exon

WP_012548898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70039-71070:-1:exon

VSAL_RS22035
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22035
old locus tag: pVSAL840_61
old locus tag: VSAL_p840_61
so part of: sequence
location: complement(71071..71682)
location: region:71071-71682:-1
so has part: feature:71071-71682:-1:exon
subclass of: SO_0000010

position:71071:-1
position: 71071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71682:-1
position: 71682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71071-71682:-1:exon

VSAL_RS22035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22035
old locus tag: pVSAL840_61
old locus tag: VSAL_p840_61
inference: COORDINATES: protein motif:HMM:NF039772.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase-associated system all-helical protein GASH
translation: MWRRGKYSPATDVCLKELESYQPTSEAILTVFAEFKRQLQSANTSMISHVKALNTENEKAAEEQEILWFITLGWSEEFDTHYSKLSTPLRIFDFAHALSLRTRLNVELPSLKALTNKIGIESEIINFREWVQTIISEYPTAIDKFKGEPSELTPCLYAIKLASQGTWYKKWNGNIGLDNKFEINSLELAQQIYREFLVLRWSK
SIO_010081: VSAL_RS22035
subclass of: SO_0000673
so part of: VSAL_RS22035
location: complement(71071..71682)
location: region:71071-71682:-1
so has part: feature:71071-71682:-1:exon

WP_012548899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71071-71682:-1:exon

VSAL_RS22040
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22040
old locus tag: pVSAL840_62
old locus tag: VSAL_p840_62
so part of: sequence
location: complement(71703..72668)
location: region:71703-72668:-1
so has part: feature:71703-72668:-1:exon
subclass of: SO_0000010

position:71703:-1
position: 71703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72668:-1
position: 72668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71703-72668:-1:exon

VSAL_RS22040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22040
old locus tag: pVSAL840_62
old locus tag: VSAL_p840_62
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017376171.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MALHLTSEDRFYIEKRRADNVSMRAIARELERSPSSISRELGRNTPDDFYGLYSSRAADNIAKERRAVASKSKAFKGIDSFIDGYLRQSLSDHTSPNVVSGELALKHQKSISENTLYRYILHCEAQGESLRKDLPRRGKAYKRSGTVRSTIKNRVDISERPAIADEKTEIGHVEIDTIVGKKHKSQLLTIVDKASKVVTIRRLKSKSAEAVIEGFKDVHLSTFYEFKTITADNGTEFAGHEEVAKITNADVYFAKPYSPWERGLNEHTNGLIRRFLPKGTDFDTVSDEELARIEHILNTRGRECLGFYSPYDIFMRHLNAA
SIO_010081: VSAL_RS22040
subclass of: SO_0000673
so part of: VSAL_RS22040
location: complement(71703..72668)
location: region:71703-72668:-1
so has part: feature:71703-72668:-1:exon

WP_012548900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71703-72668:-1:exon

VSAL_RS22045
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22045
old locus tag: pVSAL840_63
old locus tag: VSAL_p840_63
so part of: sequence
location: complement(72757..73302)
location: region:72757-73302:-1
so has part: feature:72757-73302:-1:exon
subclass of: SO_0000010

position:72757:-1
position: 72757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73302:-1
position: 73302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72757-73302:-1:exon

VSAL_RS22045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22045
old locus tag: pVSAL840_63
old locus tag: VSAL_p840_63
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEENLSQQEVSEIYPDFVDWVTSIDLSLNRDDLAFRWQTIDRVFINEDRDDIDTVLVDDLIISALGVMQSNSFVLDRIRDEIRRDDIMFPGVRGSRDEELKVLSSYSLRLLIDDNLYDDSFTSQNTTKILSASLNGKKAYKGGINLVDFAKNKCFKNARGLRERMPLKSPSLSFKSPSSR
SIO_010081: VSAL_RS22045
subclass of: SO_0000673
so part of: VSAL_RS22045
location: complement(72757..73302)
location: region:72757-73302:-1
so has part: feature:72757-73302:-1:exon

WP_012548901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72757-73302:-1:exon

VSAL_RS22050
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22050
old locus tag: pVSAL840_64
old locus tag: VSAL_p840_64
so part of: sequence
location: complement(73303..74616)
location: region:73303-74616:-1
so has part: feature:73303-74616:-1:exon
subclass of: SO_0000010

position:73303:-1
position: 73303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74616:-1
position: 74616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73303-74616:-1:exon

VSAL_RS22050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22050
old locus tag: pVSAL840_64
old locus tag: VSAL_p840_64
inference: COORDINATES: protein motif:HMM:NF012376.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallophosphoesterase
translation: MIRLLHFSDIHFKHPECLDLDTDPNTSIRDKLSSDIQEHCSKDGKNVDAILITGDIAFAGKQEEYEVAANWIDDLCSQTGCRKQNVYVVPGNHDVDRQAADGVVVDALRRQLSEIKSKTDRDSQFCKFLSDTSAGNSILHPMQNYNTFAARYDCGISPENTHWNQKIKISEDIELNLRGITTTLFSSSKDNTGKLIVDRRQTSFRQEPGQIYLSMMHHPCDWLIDSDDIKDQLDNHIQIQLFGHKHRSRWDSSDNCIRVSAISLHPDRGEAGYEPGYNIMDLKQKTIKDNKALIDVKVIVRVLQSSPMQFISKRFGDNDFILKTFSVTKSFKSKASDFKASQEIDSSFPPQDVDDILKDITDLKKIEPKATLNLKELSYSFYKLSGSDKRDILNTLDLLTNDEWELPEVERQKVAFNRAVDNNSLQLIHDSIIKKVK
SIO_010081: VSAL_RS22050
subclass of: SO_0000673
so part of: VSAL_RS22050
location: complement(73303..74616)
location: region:73303-74616:-1
so has part: feature:73303-74616:-1:exon

WP_012548902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73303-74616:-1:exon

VSAL_RS22055
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22055
old locus tag: pVSAL840_65
old locus tag: VSAL_p840_65
so part of: sequence
location: complement(74928..76940)
location: region:74928-76940:-1
so has part: feature:74928-76940:-1:exon
subclass of: SO_0000010

position:74928:-1
position: 74928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76940:-1
position: 76940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74928-76940:-1:exon

VSAL_RS22055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22055
old locus tag: pVSAL840_65
old locus tag: VSAL_p840_65
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDSSQKHDMWEMLINERNGVCTANQLIAEIGENDQLIIQSILKSHISNAAVKGKVFIKCAECFCPLIYVAESVTACGHFKHDINRSPDLDVTHSCFYYSKANSFFGTNVAHLREGQWHINTKQWLVEQLKQSLFVDTNTIAVERYIFSKDPEVNGRRRPDISFSDTKGNHYAIELTRWWISPVVVAERETFFRDQNINLIWLFSPDCQERNIATFNLILFGSPTARKDLAPHSFTLVECNAFVLTDEAKLLTEKYGILHFEVRYPVGEYQRSTNSFDIELKSVLSSLDELKLSPAKRLPYVIQSSLSFEIAQQEHKKSKRLELVKRIKLIRKAVGTAAKADRLEIIEEICEQLYLFRYIADDYRFQSHLEKRVNIAKKQLSNNKQAIREQIVRADRCKRIVLIRSSVNQKIRLGKYSSTYFNAGSEIEHLEQMWGRISTYAAFSLIKKRFERANKLMASVMLKQDEEIKEKQDKGNPDYINLMEEVRCFSEMLTVGFDELPTRTYEIKLTRLVTSLRSRELNDEASHLVTLFNFWKKRSVEKYRQQNFPKLSKGWNDKTLYKDELDKAMNALSKTYSSKNSKEEMCLTEQVEIKNIIQRFTEQIIKKVDAETNQISKLSPKGLEFYKTYMMDNYQGLLRCAFYVHNNLQSLEPKPLKKLYSLKEFCYTEL
SIO_010081: VSAL_RS22055
subclass of: SO_0000673
so part of: VSAL_RS22055
location: complement(74928..76940)
location: region:74928-76940:-1
so has part: feature:74928-76940:-1:exon

WP_012548903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74928-76940:-1:exon

VSAL_RS22060
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22060
old locus tag: pVSAL840_66
old locus tag: VSAL_p840_66
so part of: sequence
location: complement(77075..77350)
location: region:77075-77350:-1
so has part: feature:77075-77350:-1:exon
subclass of: SO_0000010

position:77075:-1
position: 77075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77350:-1
position: 77350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77075-77350:-1:exon

VSAL_RS22060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22060
old locus tag: pVSAL840_66
old locus tag: VSAL_p840_66
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017110295.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MNKKELVWHIAESADLSQQRATATLNATVDIITTALKEGDDVALVGFGTFKVNPRAAREGRNPKTGDMIQIAASNALVFKAGKALKETLNP
SIO_010081: VSAL_RS22060
subclass of: SO_0000673
so part of: VSAL_RS22060
location: complement(77075..77350)
location: region:77075-77350:-1
so has part: feature:77075-77350:-1:exon

WP_012548904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77075-77350:-1:exon

VSAL_RS22065
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22065
old locus tag: VSAL_p840_67
so part of: sequence
location: complement(77364..77960)
location: region:77364-77960:-1
so has part: feature:77364-77960:-1:exon
subclass of: SO_0000010

position:77364:-1
position: 77364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77960:-1
position: 77960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77364-77960:-1:exon

VSAL_RS22065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22065
old locus tag: VSAL_p840_67
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552315.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2913 family protein
translation: MSKLKYHQAFTELTTLALLHLYSYIDRASQFVPMKKRNERLNKFLKNQMALPCNAIIKKDIKVIIAQGRKGKSLEQKLGELHKVNCEYGEKFTDADHLFILLTYLYEAHGFESTLDDPSIERKAGVIYSNEETISRCFNDENVLIEPLPNFIIMDEPDRLVDIINGHGGMFIAEHVSTAPDDNSATLLLHKISETKKM
SIO_010081: VSAL_RS22065
subclass of: SO_0000673
so part of: VSAL_RS22065
location: complement(77364..77960)
location: region:77364-77960:-1
so has part: feature:77364-77960:-1:exon

WP_012548905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77364-77960:-1:exon

VSAL_RS23605
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS23605
so part of: sequence
location: 78309..78473
location: region:78309-78473:1
so has part: feature:78309-78473:1:exon
subclass of: SO_0000010

position:78309:1
position: 78309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78473:1
position: 78473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78309-78473:1:exon

VSAL_RS23605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS23605
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKEMFSAASDIDELIYNDGLNWLGARSFLIDGVSVRDKVNKNEWEVLMLLFFC
SIO_010081: VSAL_RS23605
subclass of: SO_0000673
so part of: VSAL_RS23605
location: 78309..78473
location: region:78309-78473:1
so has part: feature:78309-78473:1:exon

WP_158306901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78309-78473:1:exon

VSAL_RS22070
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22070
old locus tag: pVSAL840_68
old locus tag: VSAL_p840_68
so part of: sequence
location: complement(78757..79584)
location: region:78757-79584:-1
so has part: feature:78757-79584:-1:exon
subclass of: SO_0000010

position:78757:-1
position: 78757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79584:-1
position: 79584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78757-79584:-1:exon

VSAL_RS22070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22070
old locus tag: pVSAL840_68
old locus tag: VSAL_p840_68
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011263975.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPSDLHFTLQTKKEYDAEYRAKRKVRKQELISLHRSVVEEENDKKPKTPFKFEFRSRRLLRSGKWETLPPEYARILKSCEEFIDHPNRFPALNAWGGEGVNNIQCRRLVANVLACIIVNTDLIGGRIGLPTEAGLKTISYDHLQEDYALRFGRFISPKSFAKAISYLKRAGYLHSERVNVCVDMKEGTIRSAPAYKQFTERFFSDLKVVRYSNICALIIASRKRQEQKGLRFSWMSFREIASGVQEVFNAEKLNGFAQSVKTVFEAYQPHLSPH
SIO_010081: VSAL_RS22070
subclass of: SO_0000673
so part of: VSAL_RS22070
location: complement(78757..79584)
location: region:78757-79584:-1
so has part: feature:78757-79584:-1:exon

WP_044583690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78757-79584:-1:exon

VSAL_RS22075
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22075
old locus tag: pVSAL840_69
old locus tag: VSAL_p840_69
so part of: sequence
location: 80289..80525
location: region:80289-80525:1
so has part: feature:80289-80525:1:exon
subclass of: SO_0000010

position:80289:1
position: 80289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80525:1
position: 80525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80289-80525:1:exon

VSAL_RS22075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22075
old locus tag: pVSAL840_69
old locus tag: VSAL_p840_69
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNALSSPQRWKKLFPELTEKQFLCLFYYSIGFNSKRIGTLMHCEAQTIRNQIQILKQIFYIDKASDLRAVLLLRIFMT
SIO_010081: VSAL_RS22075
subclass of: SO_0000673
so part of: VSAL_RS22075
location: 80289..80525
location: region:80289-80525:1
so has part: feature:80289-80525:1:exon

WP_012548907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80289-80525:1:exon

VSAL_RS22080
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22080
old locus tag: pVSAL840_70
old locus tag: VSAL_p840_70
so part of: sequence
location: complement(80554..81303)
location: region:80554-81303:-1
so has part: feature:80554-81303:-1:exon
subclass of: SO_0000010

position:80554:-1
position: 80554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81303:-1
position: 81303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80554-81303:-1:exon

VSAL_RS22080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22080
old locus tag: pVSAL840_70
old locus tag: VSAL_p840_70
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004748407.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MKTTLITCATSHLGSEVVKAFSCDHLIMTGRNTEKLINLSDSLECKTKLVELDFFNVESVNSAAETISSEDKIDKIIFIIPRIPATNKIFPSNEEWSELYSNFFINPLSLLKKLFESDSVNEGAKILFISGLSSKSALTNYASNNCLRNAWLGQAKTMALAFGEKNISINTLSLGGVMTEAYIKKIESKAEMRNVSFEDMMKEEVSNIPMKKYATVDEVVSAIQSLVGPMVAHMTGQNILLDGGFLKGY
SIO_010081: VSAL_RS22080
subclass of: SO_0000673
so part of: VSAL_RS22080
location: complement(80554..81303)
location: region:80554-81303:-1
so has part: feature:80554-81303:-1:exon

WP_012548908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80554-81303:-1:exon

VSAL_RS22085
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22085
old locus tag: pVSAL840_71
old locus tag: VSAL_p840_71
so part of: sequence
location: complement(81300..82178)
location: region:81300-82178:-1
so has part: feature:81300-82178:-1:exon
subclass of: SO_0000010

position:81300:-1
position: 81300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82178:-1
position: 82178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81300-82178:-1:exon

VSAL_RS22085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22085
old locus tag: pVSAL840_71
old locus tag: VSAL_p840_71
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSNIALSNDRDSPVKSINQMISLWVESPSFLDDVYTFNTDAIDEGVNRILKFYQNDIDRDICISVYVKSFSDKTNESEAWSSCSPGNSMSKMTSKNKEIKTNEFIISIGNDNLGTITYFMASSNTTIYRNIIIFILLAISYSVLLFVCLRARSKNKVIIDKDKNQEKATNITNITNITNIMNRNKRSFAIHKDVVYISYNHPYCHVFYRNGQQASLRCSLTELEKSFPTIDLVRVNRSISINEELLMEQDIIKTNLTNNSISIRIKNTKIDLIIGNSYKKYFLIKVKGEGQ
SIO_010081: VSAL_RS22085
subclass of: SO_0000673
so part of: VSAL_RS22085
location: complement(81300..82178)
location: region:81300-82178:-1
so has part: feature:81300-82178:-1:exon

WP_158306902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81300-82178:-1:exon

VSAL_RS22090
type: Gene
subclass of: SO_0000704
RO_0002162: 316275
locus tag: VSAL_RS22090
old locus tag: pVSAL840_72
old locus tag: VSAL_p840_72
so part of: sequence
location: complement(82244..83374)
location: region:82244-83374:-1
so has part: feature:82244-83374:-1:exon
subclass of: SO_0000010

position:82244:-1
position: 82244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83374:-1
position: 83374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82244-83374:-1:exon

VSAL_RS22090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 316275
locus tag: VSAL_RS22090
old locus tag: pVSAL840_72
old locus tag: VSAL_p840_72
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: membrane protein
translation: MNFVNKNNVFFCILKTMTLLIAYFVSLPIQAYTIGIIVGKTQTKTSTSNHEKICILKSLAKKVANENLTFVFVKNDRTAIGSMKAAQKLIDERIDLALLPLVSHEAQAAATVFREYNIPFVTTATSIEVIKSSDNALSIMSSNQNQAFILARYYLENYKGKSLHVMVNLSKRYSITLSKEFIRNVTMLYPDANIMEHKFTKTKINNIVSKIKPGDVVFAPLYNPNIALLYMAFAEKEKKGITIIGPDSIGGRKEFYHIIKSHSNLVDLRFLKNWDGVVKGVNKNNVTSYVKAYCSGKKNTFLTTYSYDLLNFVLDRIDKLSSNSTAKDTISILKESKYQSVMDGGVLVFNEGKYNRKPMYMYQVTENGNKLIEVIN
SIO_010081: VSAL_RS22090
subclass of: SO_0000673
so part of: VSAL_RS22090
location: complement(82244..83374)
location: region:82244-83374:-1
so has part: feature:82244-83374:-1:exon

WP_012548910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82244-83374:-1:exon