Plasmodium chabaudi chabaudi strain AS genome assembly, chromosome: 12.
type: Entry
definition: Plasmodium chabaudi chabaudi strain AS genome assembly, chromosome: 12.
sequence version: NC_030112.2
sequence date: 2022-10-28
sequence: sequence
division: CON
label: NC_030112.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA317457
dblink: SAMEA768774
keyword: RefSeq
source: Plasmodium chabaudi chabaudi
organism: Plasmodium chabaudi chabaudi
taxonomy: Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia).
reference: 1
references: 25359557
reference: 2
reference: 3
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to LK022889.\n\nOn Oct 28, 2022 this sequence version replaced NC_030112.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1766339
topology: linear
so has quality: SO_0000987
location: 1..1766339
location: region:1-1766339:1
RO_0002162: 31271

NC_030112
type: RefSeq
SIO_000068: refseq

PRJNA317457
type: BioProject
SIO_000068: bioproject

SAMEA768774
type: BioSample
SIO_000068: biosample

1
title: A comprehensive evaluation of rodent malaria parasite genomes and gene expression
author: Otto, T.D.
author: Bohme, U.
author: Jackson, A.P.
author: Hunt, M.
author: Franke-Fayard, B.
author: Hoeijmakers, W.A.
author: Religa, A.A.
author: Robertson, L.
author: Sanders, M.
author: Ogun, S.A.
author: Cunningham, D.
author: Erhart, A.
author: Billker, O.
author: Khan, S.M.
author: Stunnenberg, H.G.
author: Langhorne, J.
author: Holder, A.A.
author: Waters, A.P.
author: Newbold, C.I.
author: Pain, A.
author: Berriman, M.
author: Janse, C.J.
journal: BMC Biol. 12, 86 (2014)
pubmed: 25359557
comments: Publication Status: Online-Only

25359557
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (28-OCT-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
journal: Submitted (29-MAY-2019) WTSI, Pathogen Informatics, Wellcome Trust Sanger Institute, CB10 1SA, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1766339:1
position: 1766339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1766339:1:source
so part of: sequence
organism: Plasmodium chabaudi chabaudi
mol type: genomic DNA
strain: AS
sub species: chabaudi
chromosome: 12

31271
type: Taxonomy
SIO_000068: taxonomy

PCHAS_1200100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1200100
old locus tag: PCHAS_120010
so part of: sequence
location: <401..>1893
location: region:401-1893:1
so has part: feature:401-1893:1:exon
subclass of: SO_0000010

3498955
type: Gene
SIO_000068: ncbigene

position:401:1
position: 401
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:1893:1
position: 1893
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401-1893:1:exon

PCHAS_1200100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1200100
old locus tag: PCHAS_120010
product: fam-a protein
transcript id: XM_016798764.1
SIO_010081: PCHAS_1200100
subclass of: SO_0000673
so part of: PCHAS_1200100
location: join(<401..531,698..917,1008..1077,1225..1334,1432..1650,1807..>1893)
location: region:401-1893:1
so has part: feature:401-531:1:exon
so has part: feature:698-917:1:exon
so has part: feature:1008-1077:1:exon
so has part: feature:1225-1334:1:exon
so has part: feature:1432-1650:1:exon
so has part: feature:1807-1893:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401-531:1:exon

position:531:1
position: 531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:698-917:1:exon

position:698:1
position: 698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917:1
position: 917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1008-1077:1:exon

position:1008:1
position: 1008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077:1
position: 1077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1225-1334:1:exon

position:1225:1
position: 1225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334:1
position: 1334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1432-1650:1:exon

position:1432:1
position: 1432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1650:1
position: 1650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1807-1893:1:exon

position:1807:1
position: 1807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1200100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1200100
old locus tag: PCHAS_120010
note: term=annotation;date=20130405;qualifier=removed_pro duct=Pc-fam-1 protein;qualifier=added_product=fam-a protein;curatorName=ucb@sanger.ac.uk; ;query 256-256;GPI_cleavage_site_score=1.653; iprscan;InterPro:IPR006486 : Plasmodium yoelii subtelomeric PYST-A;TIGR_TIGRFAMS:TIGR01599; score=2.1E-52;query 47-248;description=Plasmodium yoelii subtelomeric PYST-A
codon start: 1
product: fam-a protein
translation: MNKVYIKIALALLSLAGYMENVAFASETATNSDIHSSALHQNDESEQYKDLTCEDIDESLLAIEHISDTSELLLKLTENMDGYSLDSTENENKHIYSKKIGNIDIGRLHVTIPSSSKYASVLRSLWDYNDPKKTNNKFISGNVVRVYCKYAIMFEKQNIDPIYKSLVKKYALGASVKQSNDATVIVCPSRILNYLGEINDEPNMKEILENTQSIEKDINAEEALTNLNNNIAGFVIKKHDDSVEVTYINAIYEHDNSAMDKKEREITYTNILSLAQHI
SIO_010081: PCHAS_1200100
subclass of: SO_0000673
so part of: PCHAS_1200100
location: join(401..531,698..917,1008..1077,1225..1334,1432..1650,1807..1893)
location: region:401-1893:1
so has part: feature:401-531:1:exon
so has part: feature:698-917:1:exon
so has part: feature:1008-1077:1:exon
so has part: feature:1225-1334:1:exon
so has part: feature:1432-1650:1:exon
so has part: feature:1807-1893:1:exon

XP_016654134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401-531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:698-917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1008-1077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1225-1334:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1432-1650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1807-1893:1:exon

PCHAS_1200200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1200200
old locus tag: PCHAS_120020
so part of: sequence
location: complement(<2801..>3969)
location: region:2801-3969:-1
so has part: feature:2801-3969:-1:exon
subclass of: SO_0000010

3495643
type: Gene
SIO_000068: ncbigene

position:2801:-1
position: 2801
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:3969:-1
position: 3969
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2801-3969:-1:exon

PCHAS_1200200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1200200
old locus tag: PCHAS_120020
product: CIR protein
transcript id: XM_016798765.1
SIO_010081: PCHAS_1200200
subclass of: SO_0000673
so part of: PCHAS_1200200
location: complement(join(<2801..2893,2996..3817,3955..>3969))
location: region:2801-3969:-1
so has part: feature:3955-3969:-1:exon
so has part: feature:2996-3817:-1:exon
so has part: feature:2801-2893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3955-3969:-1:exon

position:3955:-1
position: 3955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2996-3817:-1:exon

position:2996:-1
position: 2996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3817:-1
position: 3817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2801-2893:-1:exon

position:2893:-1
position: 2893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1200200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1200200
old locus tag: PCHAS_120020
note: tmhmm; query 1-310; ;query 284-309; ;query 261-283; ;query 1-260; pfam_scan;Pfam:PF06022.7; E()=1.2E-71;score=241.1;query 6-279;description=Cir_Bir_Yir; iprscan;InterPro:IPR006477 : Variant antigen yir/bir/cir;TIGR_TIGRFAMS:TIGR01590; score=5.6E-39;query 18-217;description=Variant antigen yir/bir/cir; iprscan;InterPro:IPR006477 : Variant antigen yir/bir/cir;Pfam:PF06022; score=1.3E-71;query 6-279;description=Variant antigen yir/bir/cir; PIR protein
codon start: 1
product: CIR protein
translation: MSKKVCEAIKSANELFNVEKDGSNTNINYDKSLKAYCPIPNHLNNQECVHYEQVVASAFIALLTLFKNDDDDEEDVLEDDKLAEYAILWLCYKINQETHKFSNLNKFYNKYIKGIEKHFSEENGAKAYNSYKDLINNKICSNTIDISNMSKFYEACELLCKMYYECNGSSKDCTACLEKAKEFSEHFEKLNRNSDITEDDPYYKVLFTLSDDYVNLKNKCDNGQSSNFPSLPKITPKKRSVQNFAQSSEVTTSSSSVASKLIPALLVFAIPIFLGISYKYSLFGFDKRRHRQYLREKVKKIKKKMASYV
SIO_010081: PCHAS_1200200
subclass of: SO_0000673
so part of: PCHAS_1200200
location: complement(join(2801..2893,2996..3817,3955..3969))
location: region:2801-3969:-1
so has part: feature:3955-3969:-1:exon
so has part: feature:2996-3817:-1:exon
so has part: feature:2801-2893:-1:exon

XP_016654135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3955-3969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2996-3817:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2801-2893:-1:exon

PCHAS_1200300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1200300
old locus tag: PCHAS_120030
so part of: sequence
location: complement(<5882..>7079)
location: region:5882-7079:-1
so has part: feature:5882-7079:-1:exon
subclass of: SO_0000010

27794938
type: Gene
SIO_000068: ncbigene

position:5882:-1
position: 5882
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:7079:-1
position: 7079
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5882-7079:-1:exon

PCHAS_1200300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1200300
old locus tag: PCHAS_120030
product: CIR protein
transcript id: XM_016798766.1
SIO_010081: PCHAS_1200300
subclass of: SO_0000673
so part of: PCHAS_1200300
location: complement(join(<5882..5965,6074..6928,7065..>7079))
location: region:5882-7079:-1
so has part: feature:7065-7079:-1:exon
so has part: feature:6074-6928:-1:exon
so has part: feature:5882-5965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7065-7079:-1:exon

position:7065:-1
position: 7065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6074-6928:-1:exon

position:6074:-1
position: 6074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6928:-1
position: 6928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5882-5965:-1:exon

position:5965:-1
position: 5965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1200300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1200300
old locus tag: PCHAS_120030
note: tmhmm; query 1-318; ;query 297-317; ;query 274-296; ;query 1-273; pfam_scan;Pfam:PF06022.7; E()=1.7E-38;score=132.4;query 6-290;description=Cir_Bir_Yir; iprscan;InterPro:IPR006477 : Variant antigen yir/bir/cir;Pfam:PF06022; score=1.9E-38;query 6-290;description=Variant antigen yir/bir/cir; PIR protein
codon start: 1
product: CIR protein
translation: MSEELCGAIKFADENVVFDSTSQNYNFNDGILKAYCPIKDKDGNGQCESDDLKLGSAFMALLNNFKSIDGENPEGDKLYQYAILWLSYKIKQNPKIDFIRTTIDDILKQNEWYNELGITVDDKKSTIRFHYIYMNNLYNFLKGICETINKCKVSSNSNDCQESAKKCVDLYRACIMQFPWREVCNPYCRVLSNLKKDYEKIRGKYNNIPELKLTEGLFECNVECSKKNIQYKDIVDAQNNSSGGSKIVTPAVVSLPSPPVTPTSINNGNKLPYIAIPFILIPIILGISYKYLTPVWRKKAKRKAMKKIINLSDQKKA
SIO_010081: PCHAS_1200300
subclass of: SO_0000673
so part of: PCHAS_1200300
location: complement(join(5882..5965,6074..6928,7065..7079))
location: region:5882-7079:-1
so has part: feature:7065-7079:-1:exon
so has part: feature:6074-6928:-1:exon
so has part: feature:5882-5965:-1:exon

XP_016654136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7065-7079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6074-6928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5882-5965:-1:exon

PCHAS_1200400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1200400
old locus tag: PCHAS_120040
so part of: sequence
location: complement(<10116..>11341)
location: region:10116-11341:-1
so has part: feature:10116-11341:-1:exon
subclass of: SO_0000010

3494694
type: Gene
SIO_000068: ncbigene

position:10116:-1
position: 10116
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:11341:-1
position: 11341
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10116-11341:-1:exon

PCHAS_1200400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1200400
old locus tag: PCHAS_120040
product: CIR protein
transcript id: XM_016798767.1
SIO_010081: PCHAS_1200400
subclass of: SO_0000673
so part of: PCHAS_1200400
location: complement(join(<10116..10208,10310..11188,11327..>11341))
location: region:10116-11341:-1
so has part: feature:11327-11341:-1:exon
so has part: feature:10310-11188:-1:exon
so has part: feature:10116-10208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11327-11341:-1:exon

position:11327:-1
position: 11327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10310-11188:-1:exon

position:10310:-1
position: 10310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11188:-1
position: 11188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10116-10208:-1:exon

position:10208:-1
position: 10208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1200400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1200400
old locus tag: PCHAS_120040
note: term=annotation;date=20160324;qualifier=added_liter ature=pmid:26996203;qualifier=added_GO:0020003;qualifier=a dded_gene_name=cir-s;curatorName=ucb@sanger.ac.uk; ;query 303-328; ;query 280-302; ;query 1-279; tmhmm; query 1-329; pfam_scan;Pfam:PF06022.7; E()=4.0E-69;score=232.8;query 7-298;description=Cir_Bir_Yir; iprscan;InterPro:IPR006477 : Variant antigen yir/bir/cir;TIGR_TIGRFAMS:TIGR01590; score=2.8E-38;query 33-206;description=Variant antigen yir/bir/cir; iprscan;InterPro:IPR006477 : Variant antigen yir/bir/cir;Pfam:PF06022; score=4.3E-69;query 7-298;description=Variant antigen yir/bir/cir; PIR protein
codon start: 1
product: CIR protein
translation: MSEEVYKEIKKVDDSLPIGIISTGGSSSTDRVLIDYCPKKNGERQCETICDKISAGFIWLLISFENLCEGKCSDDENEKYAEYGILWLGYKINQILNGEFTTLKDFYTKHIKNNKDDVDYKDHLDNKINSMDINIKDTSNIYEAFEILCNMYTVYNENDKKCTNCSQNAEKFVQKIEEFNKDPSITVNNSYSKMLSILSNDYNCLKDHYANNCSECSNIPDFPEINPPKGSPHNSLEKSGENRAQDNVDGSVHSSLQGHAGNSQHVSEFASSSSSVASKLIPVLLTFAIPIFLGIAYKYSLFGIDKLFQRQYIRKKLKKIKKKMELNI
SIO_010081: PCHAS_1200400
subclass of: SO_0000673
so part of: PCHAS_1200400
location: complement(join(10116..10208,10310..11188,11327..11341))
location: region:10116-11341:-1
so has part: feature:11327-11341:-1:exon
so has part: feature:10310-11188:-1:exon
so has part: feature:10116-10208:-1:exon

XP_016654137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11327-11341:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10310-11188:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10116-10208:-1:exon

PCHAS_1200500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1200500
old locus tag: PCHAS_120050
so part of: sequence
location: complement(<13907..>15048)
location: region:13907-15048:-1
so has part: feature:13907-15048:-1:exon
subclass of: SO_0000010

27794939
type: Gene
SIO_000068: ncbigene

position:13907:-1
position: 13907
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:15048:-1
position: 15048
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13907-15048:-1:exon

PCHAS_1200500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1200500
old locus tag: PCHAS_120050
product: CIR protein
transcript id: XM_016798768.1
SIO_010081: PCHAS_1200500
subclass of: SO_0000673
so part of: PCHAS_1200500
location: complement(join(<13907..13978,14069..14878,15016..>15048))
location: region:13907-15048:-1
so has part: feature:15016-15048:-1:exon
so has part: feature:14069-14878:-1:exon
so has part: feature:13907-13978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15016-15048:-1:exon

position:15016:-1
position: 15016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14069-14878:-1:exon

position:14069:-1
position: 14069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14878:-1
position: 14878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13907-13978:-1:exon

position:13978:-1
position: 13978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1200500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1200500
old locus tag: PCHAS_120050
note: tmhmm; query 1-305; ;query 286-304; ;query 263-285; ;query 1-262; pfam_scan;Pfam:PF06022.7; E()=4.7E-80;score=268.7;query 12-281;description=Cir_Bir_Yir; iprscan;InterPro:IPR006477 : Variant antigen yir/bir/cir;TIGR_TIGRFAMS:TIGR01590; score=1.7E-53;query 37-222;description=Variant antigen yir/bir/cir; iprscan;InterPro:IPR006477 : Variant antigen yir/bir/cir;Pfam:PF06022; score=5.0E-80;query 12-281;description=Variant antigen yir/bir/cir; PIR protein
codon start: 1
product: CIR protein
translation: MENSSDNLKYVCKDIKKIDDCLQIDTIYTGVCSDDTLYSDYCPMKNGKKGQCETNNDKISAGFIWLLVMFEHICDDDECSQNEKDQYAGYAILWLSYILNQMPNEGIHTLKNFYTNHIETNTNYTSHVSSASDSNYKGIVDKKIDLMNMNKSIIPKFYDIFKSLCNMYNELDKNESNYTNCLKDAQNFVDEYQKFLNDNNVDTDDSSYKQILPILSNGYDNLIKKCNNGQHSNFPPLPTTKTTQLSAHISEDTSSSSSIASKLIPTLLIFAIPVFLGIAYKYSLFGFDKRFRRKYSREKLKNKE
SIO_010081: PCHAS_1200500
subclass of: SO_0000673
so part of: PCHAS_1200500
location: complement(join(13907..13978,14069..14878,15016..15048))
location: region:13907-15048:-1
so has part: feature:15016-15048:-1:exon
so has part: feature:14069-14878:-1:exon
so has part: feature:13907-13978:-1:exon

XP_016654138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15016-15048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14069-14878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13907-13978:-1:exon

PCHAS_1200600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1200600
old locus tag: PCHAS_120060
so part of: sequence
location: complement(<17498..>18649)
location: region:17498-18649:-1
so has part: feature:17498-18649:-1:exon
subclass of: SO_0000010

3493543
type: Gene
SIO_000068: ncbigene

position:17498:-1
position: 17498
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:18649:-1
position: 18649
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17498-18649:-1:exon

PCHAS_1200600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1200600
old locus tag: PCHAS_120060
product: CIR protein
transcript id: XM_016798769.1
SIO_010081: PCHAS_1200600
subclass of: SO_0000673
so part of: PCHAS_1200600
location: complement(join(<17498..17632,17737..18480,18617..>18649))
location: region:17498-18649:-1
so has part: feature:18617-18649:-1:exon
so has part: feature:17737-18480:-1:exon
so has part: feature:17498-17632:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18617-18649:-1:exon

position:18617:-1
position: 18617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17737-18480:-1:exon

position:17737:-1
position: 17737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18480:-1
position: 18480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17498-17632:-1:exon

position:17632:-1
position: 17632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1200600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1200600
old locus tag: PCHAS_120060
note: tmhmm; query 1-304; ;query 259-303; ;query 236-258; ;query 1-235; pfam_scan;Pfam:PF06022.7; E()=7.4E-66;score=222.1;query 12-259;description=Cir_Bir_Yir; iprscan;InterPro:IPR006477 : Variant antigen yir/bir/cir;Pfam:PF06022; score=7.8E-66;query 12-259;description=Variant antigen yir/bir/cir; iprscan;InterPro:IPR006477 : Variant antigen yir/bir/cir;TIGR_TIGRFAMS:TIGR01590; score=1.8E-33;query 26-217;description=Variant antigen yir/bir/cir; PIR protein
codon start: 1
product: CIR protein
translation: MRNPSYKIEDVYKEFVTISNYFNEDENDGAKTKVINEAIHNYCYYGDKQLEKDKCSGYYEMTSSGVIHLINNLKGKNVLDYDKLAEYAILWLSYKLKIKENNRIKKLSDFYNSYIETNDCYNKNINGGNLTYKAIIDKKKDLMDMDINEIFKLEAPFNILYYLYDQISDEKSFCTKNLDYAKTFAEKYEILFNNNNDTEDSPFSQILYTLSDDYNNLQKKCTNFPSLPVYPRSFSIKVTLIPITFIFVAIPIFLGFAYKHSLFGFGKRSQKQYLREKRKKIKSKEYNYILFDESDYSRNSNNY
SIO_010081: PCHAS_1200600
subclass of: SO_0000673
so part of: PCHAS_1200600
location: complement(join(17498..17632,17737..18480,18617..18649))
location: region:17498-18649:-1
so has part: feature:18617-18649:-1:exon
so has part: feature:17737-18480:-1:exon
so has part: feature:17498-17632:-1:exon

XP_016654139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18617-18649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17737-18480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17498-17632:-1:exon

PCHAS_1200700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1200700
old locus tag: PCHAS_120070
so part of: sequence
location: complement(<20950..>22051)
location: region:20950-22051:-1
so has part: feature:20950-22051:-1:exon
subclass of: SO_0000010

27794940
type: Gene
SIO_000068: ncbigene

position:20950:-1
position: 20950
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:22051:-1
position: 22051
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20950-22051:-1:exon

PCHAS_1200700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1200700
old locus tag: PCHAS_120070
product: CIR protein
transcript id: XM_016798770.1
SIO_010081: PCHAS_1200700
subclass of: SO_0000673
so part of: PCHAS_1200700
location: complement(join(<20950..21042,21144..21917,22037..>22051))
location: region:20950-22051:-1
so has part: feature:22037-22051:-1:exon
so has part: feature:21144-21917:-1:exon
so has part: feature:20950-21042:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22037-22051:-1:exon

position:22037:-1
position: 22037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21144-21917:-1:exon

position:21144:-1
position: 21144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21917:-1
position: 21917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:20950-21042:-1:exon

position:21042:-1
position: 21042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1200700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1200700
old locus tag: PCHAS_120070
note: tmhmm; query 1-294; ;query 268-293; ;query 245-267; ;query 1-244; pfam_scan;Pfam:PF06022.7; E()=2.5E-77;score=259.7;query 6-263;description=Cir_Bir_Yir; iprscan;InterPro:IPR006477 : Variant antigen yir/bir/cir;Pfam:PF06022; score=2.6E-77;query 6-263;description=Variant antigen yir/bir/cir; iprscan;InterPro:IPR006477 : Variant antigen yir/bir/cir;TIGR_TIGRFAMS:TIGR01590; score=1.1E-52;query 23-214;description=Variant antigen yir/bir/cir; PIR protein
codon start: 1
product: CIR protein
translation: MASGVCNAIKAIEKFIVVKEEDSGVYFTPNHALKAYCNAKEGGTGVCFSYAEMVSSSVLFLLKSLETSYDYGDYLKNDKLAEYAILWLSYKLNKYPQKGINTLNDFYTEHIEKNEYYNVKITKSSKTYKDIIDRKHDLMNIGIKEISQFYDAFKSLCDMYTELDKKNQDCENYFRKANKLVENFEKLNGNSDITGNNSYRKILYTLSTDYDDFKNYFVEKCSGYTNLPTLSKIKTLQFSSITSKLIPVLLAFAIPIFLGIAYKYSLLGFDKRLHIQYLREKRKKIKRKEYNYI
SIO_010081: PCHAS_1200700
subclass of: SO_0000673
so part of: PCHAS_1200700
location: complement(join(20950..21042,21144..21917,22037..22051))
location: region:20950-22051:-1
so has part: feature:22037-22051:-1:exon
so has part: feature:21144-21917:-1:exon
so has part: feature:20950-21042:-1:exon

XP_016654140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22037-22051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21144-21917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20950-21042:-1:exon

PCHAS_1200850
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1200850
old locus tag: PCHAS_120085
so part of: sequence
location: <25443..>27505
location: region:25443-27505:1
so has part: feature:25443-27505:1:exon
subclass of: SO_0000010

3493781
type: Gene
SIO_000068: ncbigene

position:25443:1
position: 25443
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:27505:1
position: 27505
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25443-27505:1:exon

PCHAS_1200850
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1200850
old locus tag: PCHAS_120085
product: fam-a protein
transcript id: XM_016798772.2
SIO_010081: PCHAS_1200850
subclass of: SO_0000673
so part of: PCHAS_1200850
location: join(<25443..25535,25677..26230,26350..26587,26684..26753,26896..27005,27099..27329,27482..>27505)
location: region:25443-27505:1
so has part: feature:25443-25535:1:exon
so has part: feature:25677-26230:1:exon
so has part: feature:26350-26587:1:exon
so has part: feature:26684-26753:1:exon
so has part: feature:26896-27005:1:exon
so has part: feature:27099-27329:1:exon
so has part: feature:27482-27505:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25443-25535:1:exon

position:25535:1
position: 25535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25677-26230:1:exon

position:25677:1
position: 25677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26230:1
position: 26230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:26350-26587:1:exon

position:26350:1
position: 26350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26587:1
position: 26587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:26684-26753:1:exon

position:26684:1
position: 26684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26753:1
position: 26753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:26896-27005:1:exon

position:26896:1
position: 26896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27005:1
position: 27005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:27099-27329:1:exon

position:27099:1
position: 27099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27329:1
position: 27329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:27482-27505:1:exon

position:27482:1
position: 27482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1200850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1200850
old locus tag: PCHAS_120085
note: term=structural;date=20130213;qualifier=method_new= gene model added based on homology and RNASeq;curatorName=ucb@sanger.ac.uk; term=annotation;date=20130405;qualifier=removed_product=Pc -fam-1 protein;qualifier=added_product=fam-a protein;curatorName=ucb@sanger.ac.uk; term=annotation;date=20110527;qualifier=removed_product=co nserved Plasmodium chabaudi protein, unknown function;qualifier=added_product=erythrocyte membrane antigen 1;curatorName=ucb@sanger.ac.uk; term=structural;date=20150820;qualifier=method_merge=merge d PCHAS_1200800 with PCHAS_1200850 based on RNASeq;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF07418.7; E()=5.0E-16;score=59.0;query 28-203;description=PCEMA1; iprscan;InterPro:IPR010882 : Acidic phosphoprotein PCEMA1;Pfam:PF07418; score=1.2E-9;query 1-61;description=Acidic phosphoprotein PCEMA1; iprscan;InterPro:IPR010882 : Acidic phosphoprotein PCEMA1;Pfam:PF07418; score=1.6E-14;query 187-392;description=Acidic phosphoprotein PCEMA1; iprscan;InterPro:IPR010882 : Acidic phosphoprotein PCEMA1;Pfam:PF07418; score=1.1E-12;query 64-206;description=Acidic phosphoprotein PCEMA1; iprscan;InterPro:IPR006486 : Plasmodium yoelii subtelomeric PYST-A;TIGR_TIGRFAMS:TIGR01599; score=1.2E-62;query 222-430;description=Plasmodium yoelii subtelomeric PYST-A; iprscan;Superfamily:SSF55961; score=2.56E-14;query 240-433;description=null
codon start: 1
product: fam-a protein
translation: MNVMSVSLISLIIFNVVLAKNTSYSGTPTNSCSLLEEKTKKTHKTTEESVNVRGKGPYEEDYEEGYEENYEDMIKDIFMPLKNNHQHSQNNSHKQDEAPPPVSKGPKKQKFTEKRQLRTLNENKEICQKPKDLLCVDPEKDTKIESKTKSKTKSKTESKTESKIESKTESKTESKTESKIESKTESKTESKTESKTESKIESKTESKTESKKTYSTSEEIYEQNEHLLCTNPKETKEAIEFMDEAVMHLVHHATNEDDYIFDAQNCYDNMFYYKKKYKGKINFEKIICISNSPNKYDTKINKLWDPQNPGLFNHFSFKVKIVRVYNPDLVMIQKRFKDSICGRWKYFNALVKKTQLSEDTTVIAMSSANINDHNPSKKEYKNTIVESANLFKTDIESEDDIRNGKLKKTFVNIAGYLIKKTNKSVTTTFVTSINGYSQF
SIO_010081: PCHAS_1200850
subclass of: SO_0000673
so part of: PCHAS_1200850
location: join(25443..25535,25677..26230,26350..26587,26684..26753,26896..27005,27099..27329,27482..27505)
location: region:25443-27505:1
so has part: feature:25443-25535:1:exon
so has part: feature:25677-26230:1:exon
so has part: feature:26350-26587:1:exon
so has part: feature:26684-26753:1:exon
so has part: feature:26896-27005:1:exon
so has part: feature:27099-27329:1:exon
so has part: feature:27482-27505:1:exon

XP_016654142.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25443-25535:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25677-26230:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26350-26587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26684-26753:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26896-27005:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27099-27329:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27482-27505:1:exon

PCHAS_1200900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1200900
old locus tag: PCHAS_120090
so part of: sequence
location: <29110..>30546
location: region:29110-30546:1
so has part: feature:29110-30546:1:exon
subclass of: SO_0000010

27794941
type: Gene
SIO_000068: ncbigene

position:29110:1
position: 29110
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:30546:1
position: 30546
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29110-30546:1:exon

PCHAS_1200900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1200900
old locus tag: PCHAS_120090
product: fam-a protein
transcript id: XM_016798773.1
SIO_010081: PCHAS_1200900
subclass of: SO_0000673
so part of: PCHAS_1200900
location: join(<29110..29234,29374..29608,29703..29772,29941..30044,30138..30368,30523..>30546)
location: region:29110-30546:1
so has part: feature:29110-29234:1:exon
so has part: feature:29374-29608:1:exon
so has part: feature:29703-29772:1:exon
so has part: feature:29941-30044:1:exon
so has part: feature:30138-30368:1:exon
so has part: feature:30523-30546:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29110-29234:1:exon

position:29234:1
position: 29234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29374-29608:1:exon

position:29374:1
position: 29374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29608:1
position: 29608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29703-29772:1:exon

position:29703:1
position: 29703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29772:1
position: 29772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:29941-30044:1:exon

position:29941:1
position: 29941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30044:1
position: 30044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:30138-30368:1:exon

position:30138:1
position: 30138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30368:1
position: 30368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:30523-30546:1:exon

position:30523:1
position: 30523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1200900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1200900
old locus tag: PCHAS_120090
note: term=structural;date=20111002;qualifier=method_exon =changed gene model, changed coordinates of exon 2 and exon 4 based on RNASeq;curatorName=ucb@sanger.ac.uk; term=annotation;date=20130405;qualifier=removed_product=Pc -fam-1 protein;qualifier=added_product=fam-a protein;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF07418.7; E()=8.2E-6;score=25.4;query 65-214;description=PCEMA1; iprscan;InterPro:IPR010882 : Acidic phosphoprotein PCEMA1;Pfam:PF07418; score=8.4E-6;query 65-214;description=Acidic phosphoprotein PCEMA1; iprscan;InterPro:IPR006486 : Plasmodium yoelii subtelomeric PYST-A;TIGR_TIGRFAMS:TIGR01599; score=4.1E-50;query 56-253;description=Plasmodium yoelii subtelomeric PYST-A; iprscan;Superfamily:SSF55961; score=1.79E-16;query 65-257;description=null
codon start: 1
product: fam-a protein
translation: MNKFYIQISLFLLSIFAYANNEALAAEYDPRQPTNLRTRYPTSGKIHEKNSHQSSSYHDYISEIEIMDEAVKHLEYHATNKNGYEVYLQNPNDSISYYVKKFNDQTDILKVNLNIYSANQYDGIVNRIWDPKSPNFFNKGNVEIIHEYNPNLVLIRQFCEQDSKYYHKYFYALVKKAQISKDKAIIAMTSVDIFDANPSSKEPKNPIVKKADLFHGYVYPEYYILCKECKKIYVNLAGYLIEKKGDDLEITYIESIEGHSSI
SIO_010081: PCHAS_1200900
subclass of: SO_0000673
so part of: PCHAS_1200900
location: join(29110..29234,29374..29608,29703..29772,29941..30044,30138..30368,30523..30546)
location: region:29110-30546:1
so has part: feature:29110-29234:1:exon
so has part: feature:29374-29608:1:exon
so has part: feature:29703-29772:1:exon
so has part: feature:29941-30044:1:exon
so has part: feature:30138-30368:1:exon
so has part: feature:30523-30546:1:exon

XP_016654143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29110-29234:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29374-29608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29703-29772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29941-30044:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30138-30368:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30523-30546:1:exon

PCHAS_1201000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1201000
old locus tag: PCHAS_120100
so part of: sequence
location: complement(<32000..>32855)
location: region:32000-32855:-1
so has part: feature:32000-32855:-1:exon
subclass of: SO_0000010

3490547
type: Gene
SIO_000068: ncbigene

position:32000:-1
position: 32000
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:32855:-1
position: 32855
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32000-32855:-1:exon

PCHAS_1201000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1201000
old locus tag: PCHAS_120100
product: fam-c protein
transcript id: XM_732432.2
SIO_010081: PCHAS_1201000
subclass of: SO_0000673
so part of: PCHAS_1201000
location: complement(join(<32000..32644,32775..>32855))
location: region:32000-32855:-1
so has part: feature:32775-32855:-1:exon
so has part: feature:32000-32644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32775-32855:-1:exon

position:32775:-1
position: 32775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:32000-32644:-1:exon

position:32644:-1
position: 32644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1201000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1201000
old locus tag: PCHAS_120100
note: term=structural;date=20130213;qualifier=method_exon =added exon 1 based on homology and RNASeq;curatorName=ucb@sanger.ac.uk; term=annotation;date=20130213;qualifier=removed_product=py st-c1 homologue, putative;qualifier=added_product=plasmodium exported protein, unknown function;curatorName=ucb@sanger.ac.uk; term=annotation;date=20130407;qualifier=removed_product=Pl asmodium exported protein, unknown function;qualifier=added_product=fam-c protein;curatorName=ucb@sanger.ac.uk; ;query 1-4; ;query 5-22; ;query 23-241; tmhmm; query 1-242; pfam_scan;Pfam:PF09690.6; E()=1.5E-22;score=78.9;query 27-83;description=PYST-C1; iprscan;InterPro:IPR006488 : Plasmodium yoelii subtelomeric PYST-C1;TIGR_TIGRFAMS:TIGR01601; score=2.9E-31;query 1-81;description=Uncharacterised domain PYST-C1, N-terminal; iprscan;InterPro:IPR006488 : Plasmodium yoelii subtelomeric PYST-C1;Pfam:PF09690; score=1.5E-22;query 27-83;description=Uncharacterised domain PYST-C1, N-terminal
codon start: 1
product: fam-c protein
translation: MNKRIFSYVCVVLYALLVVSIHCSEQKASDVRNKSVRSTKEISGCDEQNGIESKRELQLNNNNNCDIKYDEDDEGDIDDKDYKDEAYGHEYVNEDDIYNRKYVNNDVDDRGLNYLNTFQKNKKIKIKKTTSYSKELLTHPHNQIIEASSNNDDLAYKAALEKMNSLDDYIAKNLAVLRFSSLFRQTSKIELSNDKEYPPNATFSVRNMLHEFDEKYQKPLIRLLFIITDIDKCPQNSETNE
SIO_010081: PCHAS_1201000
subclass of: SO_0000673
so part of: PCHAS_1201000
location: complement(join(32000..32644,32775..32855))
location: region:32000-32855:-1
so has part: feature:32775-32855:-1:exon
so has part: feature:32000-32644:-1:exon

XP_737525.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32775-32855:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32000-32644:-1:exon

PCHAS_1201100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1201100
old locus tag: PCHAS_120110
so part of: sequence
location: <35606..>37091
location: region:35606-37091:1
so has part: feature:35606-37091:1:exon
subclass of: SO_0000010

3492730
type: Gene
SIO_000068: ncbigene

position:35606:1
position: 35606
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:37091:1
position: 37091
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35606-37091:1:exon

PCHAS_1201100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1201100
old locus tag: PCHAS_120110
product: fam-a protein
transcript id: XM_016798774.1
SIO_010081: PCHAS_1201100
subclass of: SO_0000673
so part of: PCHAS_1201100
location: join(<35606..35736,35874..36117,36211..36280,36448..36551,36642..36872,37017..>37091)
location: region:35606-37091:1
so has part: feature:35606-35736:1:exon
so has part: feature:35874-36117:1:exon
so has part: feature:36211-36280:1:exon
so has part: feature:36448-36551:1:exon
so has part: feature:36642-36872:1:exon
so has part: feature:37017-37091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35606-35736:1:exon

position:35736:1
position: 35736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35874-36117:1:exon

position:35874:1
position: 35874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36117:1
position: 36117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:36211-36280:1:exon

position:36211:1
position: 36211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36280:1
position: 36280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:36448-36551:1:exon

position:36448:1
position: 36448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36551:1
position: 36551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:36642-36872:1:exon

position:36642:1
position: 36642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36872:1
position: 36872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:37017-37091:1:exon

position:37017:1
position: 37017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1201100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1201100
old locus tag: PCHAS_120110
note: term=annotation;date=20130405;qualifier=removed_pro duct=Pc-fam-1 protein;qualifier=added_product=fam-a protein;curatorName=ucb@sanger.ac.uk; ;query 264-264;GPI_cleavage_site_score=0.684; pfam_scan;Pfam:PF07418.7; E()=1.0E-17;score=64.5;query 45-222;description=PCEMA1; iprscan;InterPro:IPR010882 : Acidic phosphoprotein PCEMA1;Pfam:PF07418; score=1.1E-17;query 45-222;description=Acidic phosphoprotein PCEMA1; iprscan;InterPro:IPR006486 : Plasmodium yoelii subtelomeric PYST-A;TIGR_TIGRFAMS:TIGR01599; score=3.3E-66;query 53-258;description=Plasmodium yoelii subtelomeric PYST-A; iprscan;Superfamily:SSF55961; score=1.25E-20;query 69-271;description=null
codon start: 1
product: fam-a protein
translation: MNKFYIKNVFFLLSIFVYVNNKTLASELAPGKDTSPKLTCHYPADNSEEIYVKNTHLLCINPEETKNADELMNEAITHLKYHATSIDGYELCVKYPNNNTLYYKKKHGNNTYIEKNHFKIYSSGMYNGVINRLWDPDRPNFYNNGYVKIVRVYNPNLVMIQQRYEKDSKGRQKYFYALVKIAQISEDETIIVMISGNINDHNPSNKEYKNTIVESANLFTAEIDSEEDIRKGKLKKVFVNIAGYLIEKKNMRVDITYVESMHGNASIYQKCIIRKALDYFLPHK
SIO_010081: PCHAS_1201100
subclass of: SO_0000673
so part of: PCHAS_1201100
location: join(35606..35736,35874..36117,36211..36280,36448..36551,36642..36872,37017..37091)
location: region:35606-37091:1
so has part: feature:35606-35736:1:exon
so has part: feature:35874-36117:1:exon
so has part: feature:36211-36280:1:exon
so has part: feature:36448-36551:1:exon
so has part: feature:36642-36872:1:exon
so has part: feature:37017-37091:1:exon

XP_016654144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35606-35736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35874-36117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:36211-36280:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:36448-36551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36642-36872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37017-37091:1:exon

PCHAS_1201200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1201200
old locus tag: PCHAS_120120
so part of: sequence
location: <40137..>41749
location: region:40137-41749:1
so has part: feature:40137-41749:1:exon
subclass of: SO_0000010

3497504
type: Gene
SIO_000068: ncbigene

position:40137:1
position: 40137
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:41749:1
position: 41749
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40137-41749:1:exon

PCHAS_1201200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1201200
old locus tag: PCHAS_120120
product: fam-a protein
transcript id: XM_016798775.1
SIO_010081: PCHAS_1201200
subclass of: SO_0000673
so part of: PCHAS_1201200
location: join(<40137..40252,40411..40663,40746..40815,40972..41081,41178..41408,41609..>41749)
location: region:40137-41749:1
so has part: feature:40137-40252:1:exon
so has part: feature:40411-40663:1:exon
so has part: feature:40746-40815:1:exon
so has part: feature:40972-41081:1:exon
so has part: feature:41178-41408:1:exon
so has part: feature:41609-41749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40137-40252:1:exon

position:40252:1
position: 40252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:40411-40663:1:exon

position:40411:1
position: 40411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40663:1
position: 40663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:40746-40815:1:exon

position:40746:1
position: 40746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40815:1
position: 40815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:40972-41081:1:exon

position:40972:1
position: 40972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41081:1
position: 41081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:41178-41408:1:exon

position:41178:1
position: 41178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41408:1
position: 41408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:41609-41749:1:exon

position:41609:1
position: 41609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1201200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1201200
old locus tag: PCHAS_120120
note: term=annotation;date=20130405;qualifier=removed_pro duct=Pc-fam-1 protein;qualifier=added_product=fam-a protein;curatorName=ucb@sanger.ac.uk; ;query 267-267;GPI_cleavage_site_score=0.30960003; iprscan;InterPro:IPR006486 : Plasmodium yoelii subtelomeric PYST-A;TIGR_TIGRFAMS:TIGR01599; score=7.1E-53;query 54-256;description=Plasmodium yoelii subtelomeric PYST-A; iprscan;Superfamily:SSF55961; score=1.65E-18;query 62-260;description=null
codon start: 1
product: fam-a protein
translation: MNKIYMKTVFSLLTLFTYASNKALGSEATSRETMLSNSLKNPVIYDPNIIYEKNKHRYLPNPGDESHAEEIMNEARTLFLQFVENTSDFKIHGTYDDNTSIYFMKYDDKYVGKIHTKIHCPYTYNEIVTTLWDPNGEKEYNDNFVSGNVGCAYNPNLLMIYQRYKNGVMGCHDYLYAFASKYKVSNNTTMIVKASANIIDHNRNKKKNENLLIKSANSFRFEIDHDEDVITGKLNNVFVDLSGYIITKNKEYVEIIHIDAFHDNYSSATKQNTLARRLNRLGAIADLKYYIYEKYTDWSKARPANI
SIO_010081: PCHAS_1201200
subclass of: SO_0000673
so part of: PCHAS_1201200
location: join(40137..40252,40411..40663,40746..40815,40972..41081,41178..41408,41609..41749)
location: region:40137-41749:1
so has part: feature:40137-40252:1:exon
so has part: feature:40411-40663:1:exon
so has part: feature:40746-40815:1:exon
so has part: feature:40972-41081:1:exon
so has part: feature:41178-41408:1:exon
so has part: feature:41609-41749:1:exon

XP_016654145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40137-40252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40411-40663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:40746-40815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40972-41081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41178-41408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41609-41749:1:exon

PCHAS_1201300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1201300
old locus tag: PCHAS_120130
so part of: sequence
location: complement(<44297..>47676)
location: region:44297-47676:-1
so has part: feature:44297-47676:-1:exon
subclass of: SO_0000010

3495662
type: Gene
SIO_000068: ncbigene

position:44297:-1
position: 44297
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:47676:-1
position: 47676
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44297-47676:-1:exon

PCHAS_1201300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1201300
old locus tag: PCHAS_120130
product: Plasmodium exported protein, unknown function
transcript id: XM_016798776.1
SIO_010081: PCHAS_1201300
subclass of: SO_0000673
so part of: PCHAS_1201300
location: complement(join(<44297..47449,47566..>47676))
location: region:44297-47676:-1
so has part: feature:47566-47676:-1:exon
so has part: feature:44297-47449:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47566-47676:-1:exon

position:47566:-1
position: 47566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:44297-47449:-1:exon

position:47449:-1
position: 47449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1201300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1201300
old locus tag: PCHAS_120130
note: term=annotation;date=20171003;qualifier=added_GO:00 43657;qualifier=added_literature=pmid:15591202;curatorName =ucb@sanger.ac.uk; ;query 1-20; ;query 21-43; ;query 44-1087; ;query 1048-1048;GPI_cleavage_site_score=0.5814; tmhmm; query 1-1088
codon start: 1
product: Plasmodium exported protein, unknown function
translation: MGPKKGIESDRGINKILATKFLVLNLTFIWILAHFTNDIPVALHNGEIAIKNKFDLRRIRILASNFGDVAHDSNNGDTMVMEDYQDTLDSFYKSKPKTKERINERKLDFMKKIYPNAINDNENSENQFLELRSKALAPVEKRNQAILDVHNNLLNFSNYGSKLEEVKRNMDSFRNSCEAELSGIKNILTNYMDNCKSQIEEVGRYIAEKNSSTNNLSEENESKHIHDDLHANNVYSQYFSDEKNSASNYRNSSLAKTENSKSGYDGNYGVFVDENKTVYEYIYKKEGNDDNAHHINERGSSDTKPKSDYATISKKQYQYELKDTAKAGYGNNMNTHKIDKKHEATGSADNHNGYKIDKKYEATGSTDNHNGYKIDKKYESTGSADNHNGYKIDKKYEGTGSIGNHNGYKIDKKYEATGSTDNHNGYKIDKKYEGTGSADNHNGYKIDKKYEGTGSIGNHNGYKIDKKYEATGSTDNHNGYKIDKKYESTGSADNHNGYKIDKKYEATGSTDNHNGYKIDKKYESTGSADNHNGYKIDKKYEATGSTDNHNTHKIDKKHDNQANNNHNDGIKNTGNQNVVDSNNQQYPPKTTYKEKTTIIMNFGSPNDESQDDVTQISEGYYTDAKKPNNDNHEKHETNVTGNSNVNILKKDAAGQSVASNTTSNKPTVEQQVSSQKTPAQQAPKQQTPGQQTPGQQAPKQQTPGQQTPGQQPPKQQTPGQQVLKQQAPGQQVLKQQAPGQQTPKQQTPGQQTPGQQTPGQQTPGQQTPGQQTPGQQAPKQALRKHVPKQQVPTQQAPAQKAPGQQALRKQVPGQQTTDQKPTDQKPTDQKPADQKPTDQKPTDQKPADQKPADQKPTDQKPTDQKPADQKPTDQKPTDQKPTDQKPTDQKPTDQKPTDQKPADQKPTDQKPADQKPTDQKPADQKPADQKPADQKPADQKPADQKPADQKPTGQKDKDQKKNEKKEKDQKKNEKKEKEKQEKERKEREKQEKKEKEKQEKERKEREKQEKKEKEKQEKERKEREKKEKKEREKQEKERKEREKKAKKNAGKQAPRVTVPDRQVAQRAPRVTVPERPVAQRVEHNKSN
SIO_010081: PCHAS_1201300
subclass of: SO_0000673
so part of: PCHAS_1201300
location: complement(join(44297..47449,47566..47676))
location: region:44297-47676:-1
so has part: feature:47566-47676:-1:exon
so has part: feature:44297-47449:-1:exon

XP_016654146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47566-47676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44297-47449:-1:exon

PCHAS_1201400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1201400
old locus tag: PCHAS_120140
so part of: sequence
location: <50935..>52224
location: region:50935-52224:1
so has part: feature:50935-52224:1:exon
subclass of: SO_0000010

3497443
type: Gene
SIO_000068: ncbigene

position:50935:1
position: 50935
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:52224:1
position: 52224
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50935-52224:1:exon

PCHAS_1201400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1201400
old locus tag: PCHAS_120140
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798777.1
SIO_010081: PCHAS_1201400
subclass of: SO_0000673
so part of: PCHAS_1201400
location: <50935..>52224
location: region:50935-52224:1
so has part: feature:50935-52224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50935-52224:1:exon

PCHAS_1201400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1201400
old locus tag: PCHAS_120140
note: true; ;query 408-408;GPI_cleavage_site_score=2.4940002; ;query 23-405; ;query 4-22; ;query 406-428; ;query 1-3; ;query 429-429; tmhmm; query 1-430
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MFNFFFFFLTIYLLFATRVVNVKAQSEGIIKTKTVEISYDENSRHLYIDSINKEICNKQKYYINEQCKIDDLMENNAENAIIPCLNGDKCSDILIYIYENNGIHIVNEKDYSKFPFYDNLSNELMKCNKIVYLNKNIKCACCIENRSNGLEESTEDPIIDLEKIKIDNLYNFKECKCVLNYPLKKNEIINPNKCDNFNCAGGFCTLQLNGQPYCSCFENYYFDKKLNSCIKHEQQIQKCDDDSTSKILLHDPTNDPQIFDQAKDTNNHESTDQPEDTLTNNDTNVLMPNNLNKIIQNPNIQDCLEDSLTDETLQCKKGNEDNENNTKENICLRLECFIDSNKPECSCLNKNGNKISNNIFDVSNISVCTLNNINCDYGICNNILNKNELGCICDKNYKYNYSLKTCISSSKMHILNFVIVFLLFLLSFI
SIO_010081: PCHAS_1201400
subclass of: SO_0000673
so part of: PCHAS_1201400
location: 50935..52224
location: region:50935-52224:1
so has part: feature:50935-52224:1:exon

XP_016654147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50935-52224:1:exon

PCHAS_1201500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1201500
old locus tag: PCHAS_120150
so part of: sequence
location: <54481..>56754
location: region:54481-56754:1
so has part: feature:54481-56754:1:exon
subclass of: SO_0000010

3498116
type: Gene
SIO_000068: ncbigene

position:54481:1
position: 54481
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:56754:1
position: 56754
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54481-56754:1:exon

PCHAS_1201500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1201500
old locus tag: PCHAS_120150
product: transformer-2 protein homolog beta, putative
transcript id: XM_016798778.1
SIO_010081: PCHAS_1201500
subclass of: SO_0000673
so part of: PCHAS_1201500
location: join(<54481..54535,55011..55128,55243..55331,55783..55860,55994..56081,56287..56583,56730..>56754)
location: region:54481-56754:1
so has part: feature:54481-54535:1:exon
so has part: feature:55011-55128:1:exon
so has part: feature:55243-55331:1:exon
so has part: feature:55783-55860:1:exon
so has part: feature:55994-56081:1:exon
so has part: feature:56287-56583:1:exon
so has part: feature:56730-56754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54481-54535:1:exon

position:54535:1
position: 54535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:55011-55128:1:exon

position:55011:1
position: 55011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55128:1
position: 55128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:55243-55331:1:exon

position:55243:1
position: 55243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55331:1
position: 55331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:55783-55860:1:exon

position:55783:1
position: 55783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55860:1
position: 55860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:55994-56081:1:exon

position:55994:1
position: 55994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56081:1
position: 56081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:56287-56583:1:exon

position:56287:1
position: 56287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56583:1
position: 56583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:56730-56754:1:exon

position:56730:1
position: 56730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1201500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1201500
old locus tag: PCHAS_120150
note: term=annotation;date=20170406;qualifier=removed_pro duct=RNA-binding protein, putative;qualifier=removed_product=transformer-2 protein homolog beta, putative;qualifier=added_gene_name=tra2b;qualifier=added_l iterature=pmid:21245033;qualifier=added_GO:0000381;qualifi er=added_GO:0000398;qualifier=added_GO:0003723;qualifier=a dded_GO:0005681;curatorName=ucb@sanger.ac.uk; term=annotation;date=20170422;qualifier=added_GO:0005634;q ualifier=added_literature=pmid:28428983;curatorName=ucb@sa nger.ac.uk; ;query 228-228;GPI_cleavage_site_score=1.72; pfam_scan;Pfam:PF00076.18; E()=2.2E-20;score=72.1;query 22-91;description=RRM_1; iprscan;InterPro:IPR000504 : RNA recognition motif, RNP-1;Pfam:PF00076; score=2.9E-20;query 22-91;description=RNA recognition motif domain; iprscan;InterPro:IPR000504 : RNA recognition motif, RNP-1;SMART:SM00360; score=3.2E-25;query 21-94;description=RNA recognition motif domain; iprscan;InterPro:IPR000504 : RNA recognition motif, RNP-1;Prosite:PS50102; score=18.769;query 20-98;description=RNA recognition motif domain; iprscan;InterPro:IPR035979 : RNA-binding domain superfamily;Superfamily:SSF54928; score=9.27E-30;query 15-127;description=RNA-binding domain superfamily
codon start: 1
product: transformer-2 protein homolog beta, putative
translation: MSYTDEKRKSEDHDHKNDGSTLYVSNLSSKITTEKLQDIFEKYGTIEKCYVISNPITKESRNFGFVTFNSSADAEDAMNKANKMDIEGRVINVEIAKRNEPHEPTPGEYKGVQNTMKRYPMRHDYHGRRYDPHFDRRKYDSRRPNPYNRDYGKGYGYRNSSFRHYDKYARNSYDHRHYDRRSIDNKYHKKGDYYKRRSKSSDGEKRYSRDDSRRRKRYDRARKSTSVSGSERRRYRNSSMDRSSFQRRK
SIO_010081: PCHAS_1201500
subclass of: SO_0000673
so part of: PCHAS_1201500
location: join(54481..54535,55011..55128,55243..55331,55783..55860,55994..56081,56287..56583,56730..56754)
location: region:54481-56754:1
so has part: feature:54481-54535:1:exon
so has part: feature:55011-55128:1:exon
so has part: feature:55243-55331:1:exon
so has part: feature:55783-55860:1:exon
so has part: feature:55994-56081:1:exon
so has part: feature:56287-56583:1:exon
so has part: feature:56730-56754:1:exon

XP_016654148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54481-54535:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55011-55128:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55243-55331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:55783-55860:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:55994-56081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:56287-56583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:56730-56754:1:exon

PCHAS_1201600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1201600
old locus tag: PCHAS_120160
so part of: sequence
location: complement(<57235..>58461)
location: region:57235-58461:-1
so has part: feature:57235-58461:-1:exon
subclass of: SO_0000010

3498114
type: Gene
SIO_000068: ncbigene

position:57235:-1
position: 57235
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:58461:-1
position: 58461
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57235-58461:-1:exon

PCHAS_1201600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1201600
old locus tag: PCHAS_120160
product: conserved protein, unknown function
transcript id: XM_016798779.1
SIO_010081: PCHAS_1201600
subclass of: SO_0000673
so part of: PCHAS_1201600
location: complement(join(<57235..57283,57615..57704,57986..>58461))
location: region:57235-58461:-1
so has part: feature:57986-58461:-1:exon
so has part: feature:57615-57704:-1:exon
so has part: feature:57235-57283:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57986-58461:-1:exon

position:57986:-1
position: 57986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57615-57704:-1:exon

position:57615:-1
position: 57615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57704:-1
position: 57704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:57235-57283:-1:exon

position:57283:-1
position: 57283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1201600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1201600
old locus tag: PCHAS_120160
note: term=annotation;date=20180518;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk
codon start: 1
product: conserved protein, unknown function
translation: MGNQLSFNIFEKHDNTKKKLYGNKYSEDDNNKRENDFTSQHNLLTNKKNIIENNKIVESHQINSEMNNKEYNRGDESDIEKIKKENFYLFDESLNSNNVKHPCHSQWFLFWVYAAYLNENFLESEKEHVTSFYSNFPEQCIRGKGKNCFAEFSQIHPIRANTRAELMMWLQMCENYCRQKAGLPVKTFNYSKLLKRWRYDDGYI
SIO_010081: PCHAS_1201600
subclass of: SO_0000673
so part of: PCHAS_1201600
location: complement(join(57235..57283,57615..57704,57986..58461))
location: region:57235-58461:-1
so has part: feature:57986-58461:-1:exon
so has part: feature:57615-57704:-1:exon
so has part: feature:57235-57283:-1:exon

XP_016654149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57986-58461:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57615-57704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57235-57283:-1:exon

PCHAS_1201700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1201700
old locus tag: PCHAS_120170
so part of: sequence
location: <59661..>61127
location: region:59661-61127:1
so has part: feature:59661-61127:1:exon
subclass of: SO_0000010

3498115
type: Gene
SIO_000068: ncbigene

position:59661:1
position: 59661
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:61127:1
position: 61127
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59661-61127:1:exon

PCHAS_1201700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1201700
old locus tag: PCHAS_120170
product: conserved Plasmodium protein, unknown function
transcript id: XM_739902.2
SIO_010081: PCHAS_1201700
subclass of: SO_0000673
so part of: PCHAS_1201700
location: <59661..>61127
location: region:59661-61127:1
so has part: feature:59661-61127:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59661-61127:1:exon

PCHAS_1201700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1201700
old locus tag: PCHAS_120170
note: tmhmm; query 1-489; ;query 1-11; ;query 12-29; ;query 30-488
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MPYSKDSMHKPVVIIFIIFLFFTQFLIITCNKNDILRNAHFLKYKKALYLQTKDKRKTTTYPAFIYPYNKLYIKSNEKEHKLNDDLKNIILLFGRIAEPYYPHTIEQFNNFKEPYSKYIYTDNIYNSTKWANVFKDNEKINKKQFYQKICQLKFKWPINEDENITEHDFYNLVIERCLNNINIIRNNIHNLKTLFTQILQKKQMYNETNASIDNKEKDTYIEKEEISHAQDLYNQWEKELFTSSATNEEDTSSSEKNMQMQNDIKMKMMEELHKFNLSDMFKQHNRSYTRLLVNEFFTREYPSKRITDMFLYLIFQKDVEGFSYEEFLMHLNILGKKILLYNCNHDSNIYFDRFFFLMKNEIKKKPNYIKKKAQIPFSDSKTMKTKKDYTINKNSYCDNKNQIKITKNKPNHNIISQTGTKKKIKSHQNINNQSRFLLPQNLDNQIDADHNEKTENNIQTSTHVGKNCLKSKLMFTVNYILNAIKNIF
SIO_010081: PCHAS_1201700
subclass of: SO_0000673
so part of: PCHAS_1201700
location: 59661..61127
location: region:59661-61127:1
so has part: feature:59661-61127:1:exon

XP_744995.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59661-61127:1:exon

PCHAS_1201800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1201800
old locus tag: PCHAS_120180
so part of: sequence
location: <62712..>65438
location: region:62712-65438:1
so has part: feature:62712-65438:1:exon
subclass of: SO_0000010

3492090
type: Gene
SIO_000068: ncbigene

position:62712:1
position: 62712
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:65438:1
position: 65438
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62712-65438:1:exon

PCHAS_1201800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1201800
old locus tag: PCHAS_120180
product: conserved Plasmodium protein, unknown function
transcript id: XM_733947.2
SIO_010081: PCHAS_1201800
subclass of: SO_0000673
so part of: PCHAS_1201800
location: <62712..>65438
location: region:62712-65438:1
so has part: feature:62712-65438:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62712-65438:1:exon

PCHAS_1201800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1201800
old locus tag: PCHAS_120180
note: query 891-891;GPI_cleavage_site_score=0.11019999
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MIGKFISQTYDKVKNNADKVRLHVSIQAIKAKEIFGSAKPTTVDDLEVLLNLELQQIDSAETLVETYKKWIYNLSQSEESGCIRYYKSVNRNNERNLLDGIRQNINRSFNSNSSFEIKKNKDSSITAPIINFDSINSYKSNSSEQINTHDNNLNIGQVEGSFCEKKHSIEHSSVSSNSLRDNFNTTASISDTTNNKNDNDNSNNKTLNTFQEDISLKKNDSFEEKKKQDQVDTKHQYENKNNIRSNHLNTESIPSNIYHDYYGYNFKEIFLKSNILEKSISLIIEKRPIRLSLVGPIEKDDIDNPRTTILNMFKHCLMGDEKLHKNILFIILTTDQLFDNHKEIFLELFSILKYDYKDVYLSNIRKLVSSEIVSLKNKIQSYDNEYSIPNKLSNIINNTPQISASYIDLDKCAKYLYSTGSFESLSNELIFDDNKKTQNIQENLLHQDSTSSQETHIDKENIHSVAQTKQKDQIAHSLEQDKTNSNTITEENIVQKESTDKEEGYIETKYEKPEEYTYKTLDSLAEEREMIEINKIQQIKILASSKLLELHKTIENILLLSTKNREKRKDDIKIKLEELKKIMNVCKKDCEVILNETEDSKLHLENIYVKELNVRNDHIKKTQESINKIENDIDELTIKKNELYKEYQIICKEINMKNKELSEQMSILSLYKKELNETEHNYLNKLSNTNKSKHMNQERKLYISNLDIISDEILKEYETSDHLDTENLFSKSNKIKIPIMRVVTKHLNYLKDKLFLLDLLLKFYLNKINEQLKNKQNSDISFSENKDTINNEQNTEWSKKESLESDPIQNTNNTEENKPAFGSPLHYDEYERKKKMIKYKNCYFKVIEQISKIWITIQEFYDLNKEQIDQQQDELKQSAHFIYKQTDEIYNSIKIFITENSSLMSSIS
SIO_010081: PCHAS_1201800
subclass of: SO_0000673
so part of: PCHAS_1201800
location: 62712..65438
location: region:62712-65438:1
so has part: feature:62712-65438:1:exon

XP_739040.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62712-65438:1:exon

PCHAS_1201900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1201900
old locus tag: PCHAS_120190
so part of: sequence
location: <66531..>70436
location: region:66531-70436:1
so has part: feature:66531-70436:1:exon
subclass of: SO_0000010

3491611
type: Gene
SIO_000068: ncbigene

position:66531:1
position: 66531
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:70436:1
position: 70436
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66531-70436:1:exon

PCHAS_1201900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1201900
old locus tag: PCHAS_120190
product: DnaJ protein, putative
transcript id: XM_733477.2
SIO_010081: PCHAS_1201900
subclass of: SO_0000673
so part of: PCHAS_1201900
location: <66531..>70436
location: region:66531-70436:1
so has part: feature:66531-70436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66531-70436:1:exon

PCHAS_1201900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1201900
old locus tag: PCHAS_120190
note: tmhmm; query 1-1302; ;query 1202-1301; ;query 1179-1201; ;query 1-1178; pfam_scan;Pfam:PF00226.27; E()=1.1E-12;score=47.8;query 477-534;description=DnaJ; iprscan;InterPro:IPR036869 : Chaperone J-domain superfamily;Superfamily:SSF46565; score=5.23E-20;query 475-548;description=Chaperone J-domain superfamily; iprscan;InterPro:IPR001623 : Heat shock protein DnaJ, N-terminal;Prosite:PS50076; score=16.873;query 476-537;description=DnaJ domain; iprscan;InterPro:IPR001623 : Heat shock protein DnaJ, N-terminal;PRINTS:PR00625; score=6.9E-8;query 509-529;description=DnaJ domain; iprscan;InterPro:IPR001623 : Heat shock protein DnaJ, N-terminal;PRINTS:PR00625; score=6.9E-8;query 529-548;description=DnaJ domain; iprscan;InterPro:IPR001623 : Heat shock protein DnaJ, N-terminal;PRINTS:PR00625; score=6.9E-8;query 478-496;description=DnaJ domain; iprscan;InterPro:IPR001623 : Heat shock protein DnaJ, N-terminal;Pfam:PF00226; score=7.2E-13;query 477-534;description=DnaJ domain; iprscan;InterPro:IPR001623 : Heat shock protein DnaJ, N-terminal;SMART:SM00271; score=3.5E-12;query 475-529;description=DnaJ domain
codon start: 1
product: DnaJ protein, putative
translation: MKKTNKTGNLSLKNNNDNNALNKCPNYFNINKIKELYNFQNDHDYEKIFNISEKNTLGTRKRNKISEGNDISLSKSGNNIVIQNKKIDDATKSARITKGNRTNSSENIANEFPHSNELQASMSQQTFTNFNCPKIKKSQSNKENNLQTVHKNKKIKLNNVYDESYFFNNSLDKTPTKNMTNNNIDTHDQIYIKRTSKKNIQRNKNNDSATSPNNILNKYDFIRYICSPTKIACNDNNEQNKCNISNKQKDVTDLQKIQYYNKNRKIAHTENVTNSDSNAQIINNNNKNKNTPYYIQTENNIPNKLPDPTTCYNKYKNHMPIDLTIDIPKNSLDEINSDIESKTPTKKYSNTDQDDFQDSNKRTPIDLNSAESINRLKKNFFINSKKFFINDFKIDDTKDKAKNTEQSQPPHDCNNIEGINYNSENLKYVGKEDNTTNSNDNNEQNCDDDSHDEQYYFGYANKFKQNKKKSYNISKSLYSYLDLSYNCSKDEIKKAYKDKIKIHHPDKGGDIKQFLEIKLSYDILIDEKKRKMYDKYGNTILELLMSENFNDYNISSDEKNCETEKDDEENEEKGEDIDDESLRIYDLFVQKYNNVSYLHNRGSLKINSKQYNQFQKLVYHFFNNQQNCIFKNIFYIYPIYSKNMPPFSKSDAYNSNNKKKKNKKYTNINDSRNSTNSFDESHAEYDNDYGSINKSSEHIEDNSKDDYTQSNDSLFENSSYSDIGKEITINDIIKKKKRINIFEELTSQFNKFYNDTIIQKTNNSEQFIDTSKNLHHKIPPDHTNKPFETQNNDATTFMKDDISKDVDGTHNPNDGYEDKYNFFKDIQVSPIKYKVINESTDKDADCFYKWFDFFFKNDNTSPQKNIYTNQTSLSSKNKPNKTKYFNTQKEGIIFQNNNPYHLNNTHTNKPTEYTPSKNNPNIFQFVSQNNQFSPDAYKYEYPYNYSCSINKCDNTNYPNSNKENVNPHSYHNNSPINSYCQYISDYKNENLQKPIFYSNPCYNNMYPKVSSPNLYTPIKISDKKSTQNCDNIPITYSCEKKKDDILINIEEKYGFNLLKKNEQKIKDMTYDFNYIYVGHNVKKKKRFLLFIKEESIKNFLKIKLLIHKIKNKSNLKHISLFQKEIDKIIKNIEYILLFVTCKDELIPLTDFYLLDKNVYSKEHYCIPLHIKKNSIILRPAYFHLKWVIYTLQSFILFNLFFQKINKYMCSFPFFNYKYNYFKNFIISEQQTEQDSIPNTYIFFHNHIIKNKHKYIKYFPHKVSLYLKKLEPITPSNVKHIQINLSPLFVLTPYKNFDLTEY
SIO_010081: PCHAS_1201900
subclass of: SO_0000673
so part of: PCHAS_1201900
location: 66531..70436
location: region:66531-70436:1
so has part: feature:66531-70436:1:exon

XP_738570.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66531-70436:1:exon

PCHAS_1202000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1202000
old locus tag: PCHAS_120200
so part of: sequence
location: <72008..>72926
location: region:72008-72926:1
so has part: feature:72008-72926:1:exon
subclass of: SO_0000010

27794942
type: Gene
SIO_000068: ncbigene

position:72008:1
position: 72008
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:72926:1
position: 72926
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72008-72926:1:exon

PCHAS_1202000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1202000
old locus tag: PCHAS_120200
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798780.1
SIO_010081: PCHAS_1202000
subclass of: SO_0000673
so part of: PCHAS_1202000
location: join(<72008..72132,72264..72344,72491..72521,72615..72700,72866..>72926)
location: region:72008-72926:1
so has part: feature:72008-72132:1:exon
so has part: feature:72264-72344:1:exon
so has part: feature:72491-72521:1:exon
so has part: feature:72615-72700:1:exon
so has part: feature:72866-72926:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72008-72132:1:exon

position:72132:1
position: 72132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:72264-72344:1:exon

position:72264:1
position: 72264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72344:1
position: 72344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:72491-72521:1:exon

position:72491:1
position: 72491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72521:1
position: 72521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:72615-72700:1:exon

position:72615:1
position: 72615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72700:1
position: 72700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:72866-72926:1:exon

position:72866:1
position: 72866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1202000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1202000
old locus tag: PCHAS_120200
note: tmhmm; query 1-128; ;query 1-108; ;query 109-126; ;query 127-127
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MSQLNNKILKAKVEGVKTDDLDIFKSSLIPFDATFEEYNPEEESIIVQFKTAVEKQHLDLLGNYTIKPITYEKHEDTDQQLRKRKSNLICDRIIVDEHDIIKFFMKTTIIIPVIFVLLSLLVLFSIF
SIO_010081: PCHAS_1202000
subclass of: SO_0000673
so part of: PCHAS_1202000
location: join(72008..72132,72264..72344,72491..72521,72615..72700,72866..72926)
location: region:72008-72926:1
so has part: feature:72008-72132:1:exon
so has part: feature:72264-72344:1:exon
so has part: feature:72491-72521:1:exon
so has part: feature:72615-72700:1:exon
so has part: feature:72866-72926:1:exon

XP_016654150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72008-72132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72264-72344:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72491-72521:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:72615-72700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:72866-72926:1:exon

PCHAS_1202100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1202100
old locus tag: PCHAS_120210
so part of: sequence
location: <75145..>78516
location: region:75145-78516:1
so has part: feature:75145-78516:1:exon
subclass of: SO_0000010

3493307
type: Gene
SIO_000068: ncbigene

position:75145:1
position: 75145
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:78516:1
position: 78516
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75145-78516:1:exon

PCHAS_1202100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1202100
old locus tag: PCHAS_120210
product: conserved protein, unknown function
transcript id: XM_016798781.1
SIO_010081: PCHAS_1202100
subclass of: SO_0000673
so part of: PCHAS_1202100
location: <75145..>78516
location: region:75145-78516:1
so has part: feature:75145-78516:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:75145-78516:1:exon

PCHAS_1202100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1202100
old locus tag: PCHAS_120210
note: term=annotation;date=20180319;qualifier=added_GO:00 16021;curatorName=ucb@sanger.ac.uk; term=annotation;date=20180705;qualifier=removed_product=co nserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk; ;query 1-16; ;query 74-84; ;query 147-152; ;query 845-906; ;query 972-982; ;query 1035-1040; ;query 1084-1123; ;query 17-36; ;query 51-73; ;query 85-104; ;query 124-146; ;query 153-175; ;query 822-844; ;query 907-929; ;query 949-971; ;query 983-1005; ;query 1015-1034; ;query 1041-1060; ;query 1064-1083; ;query 37-50; ;query 105-123; ;query 176-821; ;query 930-948; ;query 1006-1014; ;query 1061-1063; tmhmm; query 1-1124
codon start: 1
product: conserved protein, unknown function
translation: MENHNVHSIDIKSEDFVVLIALQSLQTFIVTGYAAIDSKKLVLDFKYLWTVLLGTALFISSLISFVIIRAFVYSKNSIGKYILELLFFFSIVITCILSIIFDSFKISNMQLLFFAFSLTGYSYYNLITLLFFSVLLGIIIQYNLVISGFMLNAKYILFSDIISYTLQIIGGHALYFRMYKLCNLIVMSKKNPCKYVVISKEVKNLEEQIFKKLIKSYICINSKTYSDISSINDNSNNDHKSIRDNFLDLKFKSLNTHRDSKYMKKYKLLNSESEFNKFNYTTSFSKYYNTKYSKLYHNSISKNSNIFPLKIYSNIKPSNNLHTFLSKKISNKFLKKKKISKTNFVKHSSSSTTDHKHTSNYNEGNPINNIDSTQFDDDLEQIQNKKSIKHKKKKAKQVSLKKKASIISSYESLNSYANQSNKGNHELAIQIKESSTEENLSQYNDKPSLESLPNHHSTINIHDKNIQYGVHFSKKTDKESEHTQDELIASTGKTTKRDAKQTKSKLTHENIKHNKGKKKSSSKKIHMEISSDNSCNSNYDTQNGYDNAYSTKAKDNKIINKNGPHNTYNERMVHPNYIKSCAVIPTRDYKTEMPKNQINHIQDYDCNILSCIYHEQNNIMNNIHIANKNENNYPHKHYTIYDQPNATNKQSGNNNYDDITATEHTIDILNDTFPGESELIENEQNLPKDNSFNYKTNKGSILRYKSKHYFNDDESYKFKKSLDTNNDTNSYIYRSISCNNNKIIKFTQPYYNKNNELNYMNTHGSNYKYDKSKTLKQYQIMDKIIELDIYNTEDGVKKYNKKRIYSIAKKKKTIFSTKKGKTCATIFLENTKMNLLFIYIPRFFKTILDVSKKTFLNLKKKKILMQNAIWKNKIFIPEANAVGLFKNPNLEQWYLSWMDEFNINLIIRTYFMNIYLIIYIMLLDFITAYKLYNSNIILNPLKRSNFLKYYIPRSIINIFMYIFYILFISKMKKRQYCNIKKYYNSTLLLCLAKFIITSFDIYIALTSLKYFTSPYYIYMYIHMLTIQTTILLIVRYPTQYFLFFIYIIMFISLYCSFAIVKSFMEFSFIITCISFNIIYSYILCSRTIETNRRILFSKYELPYILYLKEIVHCISTNPSWQCN
SIO_010081: PCHAS_1202100
subclass of: SO_0000673
so part of: PCHAS_1202100
location: 75145..78516
location: region:75145-78516:1
so has part: feature:75145-78516:1:exon

XP_016654151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75145-78516:1:exon

PCHAS_1202200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1202200
old locus tag: PCHAS_120220
so part of: sequence
location: <79934..>80633
location: region:79934-80633:1
so has part: feature:79934-80633:1:exon
subclass of: SO_0000010

3485745
type: Gene
SIO_000068: ncbigene

position:79934:1
position: 79934
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:80633:1
position: 80633
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79934-80633:1:exon

PCHAS_1202200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1202200
old locus tag: PCHAS_120220
product: conserved protein, unknown function
transcript id: XM_016798782.1
SIO_010081: PCHAS_1202200
subclass of: SO_0000673
so part of: PCHAS_1202200
location: join(<79934..79942,80134..80187,80330..80488,80571..>80633)
location: region:79934-80633:1
so has part: feature:79934-79942:1:exon
so has part: feature:80134-80187:1:exon
so has part: feature:80330-80488:1:exon
so has part: feature:80571-80633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79934-79942:1:exon

position:79942:1
position: 79942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:80134-80187:1:exon

position:80134:1
position: 80134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80187:1
position: 80187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80330-80488:1:exon

position:80330:1
position: 80330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80488:1
position: 80488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:80571-80633:1:exon

position:80571:1
position: 80571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1202200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1202200
old locus tag: PCHAS_120220
note: term=annotation;date=20180705;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk; ;query 1-40; ;query 41-63; ;query 64-94; ;query 55-55;GPI_cleavage_site_score=0.21600002; tmhmm; query 1-95
codon start: 1
product: conserved protein, unknown function
translation: MLFKNSPIRYISHEMKSMPKPPPGTGVVFHGRLQKVKYAINFPSYIFIIFSGFMGAMSGNFFYKKYILRPNPPNPLRDPNDLPPEKHPHTPEDD
SIO_010081: PCHAS_1202200
subclass of: SO_0000673
so part of: PCHAS_1202200
location: join(79934..79942,80134..80187,80330..80488,80571..80633)
location: region:79934-80633:1
so has part: feature:79934-79942:1:exon
so has part: feature:80134-80187:1:exon
so has part: feature:80330-80488:1:exon
so has part: feature:80571-80633:1:exon

XP_016654152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79934-79942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80134-80187:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80330-80488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80571-80633:1:exon

PCHAS_1202300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1202300
old locus tag: PCHAS_120230
so part of: sequence
location: <82285..>83066
location: region:82285-83066:1
so has part: feature:82285-83066:1:exon
subclass of: SO_0000010

27794943
type: Gene
SIO_000068: ncbigene

position:82285:1
position: 82285
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:83066:1
position: 83066
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82285-83066:1:exon

PCHAS_1202300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1202300
old locus tag: PCHAS_120230
product: ribosome-binding factor A, putative
transcript id: XM_016798783.1
SIO_010081: PCHAS_1202300
subclass of: SO_0000673
so part of: PCHAS_1202300
location: join(<82285..82662,82833..>83066)
location: region:82285-83066:1
so has part: feature:82285-82662:1:exon
so has part: feature:82833-83066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82285-82662:1:exon

position:82662:1
position: 82662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82833-83066:1:exon

position:82833:1
position: 82833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1202300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1202300
old locus tag: PCHAS_120230
note: term=annotation;date=20150824;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=ribosome-binding factor a, putative;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF02033.14; E()=9.2E-15;score=54.8;query 62-166;description=RBFA; iprscan;InterPro:IPR000238 : Ribosome-binding factor A;Pfam:PF02033; score=9.6E-15;query 62-165;description=Ribosome-binding factor A; iprscan;InterPro:IPR023799 : Ribosome-binding factor A domain;Superfamily:SSF89919; score=1.57E-15;query 62-165;description=Ribosome-binding factor A domain superfamily
codon start: 1
product: ribosome-binding factor A, putative
translation: MYLYLIILLSIFTKINYTLVIKHKANTFNHMHFLNTHIPRKQFKNTAYLTKKETPRHEIYRKRFEKEIKNALQSIIYKKGIKFNYKYHIDEDIIEGITIHNVQLSPDCSVAKVIIEIMGDSVDSRQGYIWIQKNCKHIRYKLAELIKHRKRVPFLNFVLSNLSEQTQLFCEIENIRESYGDMFKEELNNELLFDKDDPQENST
SIO_010081: PCHAS_1202300
subclass of: SO_0000673
so part of: PCHAS_1202300
location: join(82285..82662,82833..83066)
location: region:82285-83066:1
so has part: feature:82285-82662:1:exon
so has part: feature:82833-83066:1:exon

XP_016654153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82285-82662:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82833-83066:1:exon

PCHAS_1202400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1202400
old locus tag: PCHAS_120240
so part of: sequence
location: complement(<83687..>84145)
location: region:83687-84145:-1
so has part: feature:83687-84145:-1:exon
subclass of: SO_0000010

3494619
type: Gene
SIO_000068: ncbigene

position:83687:-1
position: 83687
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:84145:-1
position: 84145
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83687-84145:-1:exon

PCHAS_1202400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1202400
old locus tag: PCHAS_120240
product: N-terminal acetyltransferase A complex catalytic subunit ARD1, putative
transcript id: XM_736445.1
SIO_010081: PCHAS_1202400
subclass of: SO_0000673
so part of: PCHAS_1202400
location: complement(<83687..>84145)
location: region:83687-84145:-1
so has part: feature:83687-84145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83687-84145:-1:exon

PCHAS_1202400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1202400
old locus tag: PCHAS_120240
note: term=annotation;date=20150824;qualifier=removed_pro duct=N-acetyltransferase, putative;qualifier=added_product=n-terminal acetyltransferase a complex catalytic subunit ard1, putative;qualifier=added_gene_name=ard1;qualifier=added_ec _number=2.3.1.88;qualifier=added_GO:0031415;qualifier=adde d_GO:0004596;qualifier=added_GO:0006474;curatorName=ucb@sa nger.ac.uk; ;query 115-115;GPI_cleavage_site_score=2.3220003; pfam_scan;Pfam:PF00583.20; E()=6.9E-8;score=32.5;query 49-121;description=Acetyltransf_1; iprscan;InterPro:IPR016181 : Acyl-CoA N-acyltransferase;Superfamily:SSF55729; score=1.01E-19;query 1-149;description=Acyl-CoA N-acyltransferase; iprscan;InterPro:IPR000182 : GCN5-related N-acetyltransferase;Pfam:PF00583; score=3.0E-9;query 39-121;description=GNAT domain; iprscan;InterPro:IPR000182 : GCN5-related N-acetyltransferase;Prosite:PS51186; score=12.043;query 2-151;description=GNAT domain
codon start: 1
product: N-terminal acetyltransferase A complex catalytic subunit ARD1, putative
translation: MLSIRKSNIYDLLAMQKCNSVNLPENYNMRYYFYHDISWPSLSQLAEDYDGKICGYTLGKLEEEDEKKGHLTSVAVLKTYRKQKLAYYLITQTHEFINKVYNVNNICLHVRVSNSAALNLYFNLLNYKIKGIEHLYYGNKEDAYQMEHIFVK
SIO_010081: PCHAS_1202400
subclass of: SO_0000673
so part of: PCHAS_1202400
location: complement(83687..84145)
location: region:83687-84145:-1
so has part: feature:83687-84145:-1:exon

XP_741538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83687-84145:-1:exon

PCHAS_1202500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1202500
old locus tag: PCHAS_120250
so part of: sequence
location: complement(<85915..>90888)
location: region:85915-90888:-1
so has part: feature:85915-90888:-1:exon
subclass of: SO_0000010

3488478
type: Gene
SIO_000068: ncbigene

position:85915:-1
position: 85915
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:90888:-1
position: 90888
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85915-90888:-1:exon

PCHAS_1202500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1202500
old locus tag: PCHAS_120250
product: conserved Plasmodium protein, unknown function
transcript id: XM_730389.2
SIO_010081: PCHAS_1202500
subclass of: SO_0000673
so part of: PCHAS_1202500
location: complement(<85915..>90888)
location: region:85915-90888:-1
so has part: feature:85915-90888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85915-90888:-1:exon

PCHAS_1202500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1202500
old locus tag: PCHAS_120250
note: tmhmm; query 1-1658; ;query 1649-1657; ;query 1629-1648; ;query 1-1628
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MFYLDTKLNIKNFGNNENKVDRSYMNIRKVNSEHARYNLGKTTYTKMNNNYIMNEDRNNVVLNKYLKNAHLLNNINDQTNGTYGIKSKLPTLYARTSSPIKINGAYPIYKNENVYYYKENIPFKKRMCNSVEIVTLSNINTAHEYLQNNKINNSFIKFPNNLKLNNNFNDGQKKTIEKMQEQKYFPKKNSCAANLKRSMSIYTVLNNGEINNNNTNYYYNNNNNYICKNIPELYSKKKASVNTKKTMKNCFEIVKSKYDEMHNKNVIDEKNKYIPPHNYNISLINGAKVCANNIGRNKIKHCNSMLLNNSIKNDTQHINLWKEEQIDVPNAIIKSHTLTKFPVGSSIYHKTQTPNIRQYGSMSQFENPVKLVQLKTINSFDADENNKNNNEVLGTGPEYLSQQNSSIHDGNGEYHPLRSSTLPCNKNEKERSNICNLSCMNSKYISYENVGNGIIQNQEQAVPMVESKNGQDTFNQNNCNELKDAKGEENVNKTNELMKKTEKYICGNSSNIESSKNSIHAKLCSVENIEIIKQKNYRENEEINNENLIKESEIQNNSIKKTNVENKKVNNPTNLRNGINIDALKGCILGNLSKSNNENQDVTFNSIDNISKEENDASEKCSNTNEVKKNSILKIEETEIDNSSERIHYNSGENCNLESENEKKLKMNKRKSSNNESINFKDELSPSHIMELLKILKKLKKSKIYKFSIDKFLLQENGYEKIIKYIEKNEYKRGSTLNTSVYESDNNSKSNDGKYSENDLYNVDNKNDNRFDEVLKCKTNKSNSKVDKNVVKSLETIYKVKNCLYTLGISFNEVINLDKIKSIFWYLYIKHKLSKKMSISEFCEMLNYKIDENMNKNYFKEYVNYEIFKKHNRDNFENFGNKIQVLESLFYLLKSYPINYDENKGCFYMLNPEKNKMYKNYKYNTDRNKMSIIKLTNEVTENFKNSFFFLDKIFIPKDAFFFVKDSEDVGIRNNKNKPVYVHHALVNDLKEEMAEQTVFDNLYSCEPPYKSDYYRYIQKKRIQNKIRKFKEYILNYYEFDSVEDFFETLLVFDVEHKKLISILSNNKTNDFMNPLNNNYNKYVSLCFNITKNIYEQYRSLVDSNDDNTLTKENEINSLEIKENGYNVEYFNLDSAETVKVKMENRRKNTKTDWSTIESQIGTTDSCNSDEHIVRTNTYINIDKIDKKNEETIEEMSIMYEEFFNFGNTRKKVKEINIDTFKIFIENLGKLKGFPNFASINECFLGICFCDPDLPKHIFNQKNILPKNMNFNGFMNCMRYIPYVIPDFPLPTSYFKNKYNNIDVFNSRNQFLNILKYKGCKKETIHLRNQIVLDITKLFVLISWNFGVNTEEFNEVVGLEPNKLVDMVNSSYYINYKYSLKKKQKNKNNGEKTMPESGIDGLYTSSSTESITDSEQSEEMYSNTCNLFDVKGMIKQNSKHSSYIERGNTKNYKSTSDCTQNSNEYNMLFEELLKKGGKKKMTYKVVPKWHASNDIFLSRLVSYDEIQIGLYELYPLFMIQTSLIYMIHISCCMITEDEWKYFFEDSFTLYKKLQPEEIAMRYIKNKGCRFYKLKNIQLNESIDIHNAFMKIPENMKCPEVRKLAINGENTASGYLAEPFDIYHLMFISKVFWYIFTYSDNFLILRSALLRNCKNKKKQ
SIO_010081: PCHAS_1202500
subclass of: SO_0000673
so part of: PCHAS_1202500
location: complement(85915..90888)
location: region:85915-90888:-1
so has part: feature:85915-90888:-1:exon

XP_735482.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85915-90888:-1:exon

PCHAS_1202600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1202600
old locus tag: PCHAS_120260
so part of: sequence
location: complement(<92169..>93002)
location: region:92169-93002:-1
so has part: feature:92169-93002:-1:exon
subclass of: SO_0000010

3492886
type: Gene
SIO_000068: ncbigene

position:92169:-1
position: 92169
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:93002:-1
position: 93002
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92169-93002:-1:exon

PCHAS_1202600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1202600
old locus tag: PCHAS_120260
product: 40S ribosomal protein S20e, putative
transcript id: XM_016798784.1
SIO_010081: PCHAS_1202600
subclass of: SO_0000673
so part of: PCHAS_1202600
location: complement(join(<92169..92425,92903..>93002))
location: region:92169-93002:-1
so has part: feature:92903-93002:-1:exon
so has part: feature:92169-92425:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92903-93002:-1:exon

position:92903:-1
position: 92903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92169-92425:-1:exon

position:92425:-1
position: 92425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1202600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1202600
old locus tag: PCHAS_120260
note: pfam_scan;Pfam:PF00338.18; E()=1.5E-25;score=89.1;query 20-113;description=Ribosomal_S10; iprscan;InterPro:IPR036838 : Ribosomal protein S10 domain superfamily;Superfamily:SSF54999; score=1.29E-27;query 19-115;description=Ribosomal protein S10 domain superfamily; iprscan;InterPro:IPR001848 : Ribosomal protein S10;PRINTS:PR00971; score=5.8E-12;query 18-31;description=Ribosomal protein S10; iprscan;InterPro:IPR001848 : Ribosomal protein S10;PRINTS:PR00971; score=5.8E-12;query 53-68;description=Ribosomal protein S10; iprscan;InterPro:IPR001848 : Ribosomal protein S10;PRINTS:PR00971; score=5.8E-12;query 75-89;description=Ribosomal protein S10; iprscan;InterPro:IPR027486 : Ribosomal protein S10 domain;Pfam:PF00338; score=1.9E-25;query 20-113;description=Ribosomal protein S10 domain; iprscan;InterPro:IPR027486 : Ribosomal protein S10 domain;SMART:SM01403; score=4.6E-32;query 20-114;description=Ribosomal protein S10 domain; iprscan;InterPro:IPR005729 : Ribosomal protein S10, eukaryotic/archaeal;TIGR_TIGRFAMS:TIGR01046; score=2.5E-38; query 18-114;description=Ribosomal protein S10, eukaryotic/archaeal
codon start: 1
product: 40S ribosomal protein S20e, putative
translation: MSKLMKGAIDNEKYRLRRIRIALTSKNLRAIEKVCSDIMKGAKEKNLNVSGPVRLPVKTLRITTRKSPCGEGTNTWDRFELRIYKRLIDLYSQCEVVTQMTSINIDPVVEVEVIITDS
SIO_010081: PCHAS_1202600
subclass of: SO_0000673
so part of: PCHAS_1202600
location: complement(join(92169..92425,92903..93002))
location: region:92169-93002:-1
so has part: feature:92903-93002:-1:exon
so has part: feature:92169-92425:-1:exon

XP_016654154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92903-93002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92169-92425:-1:exon

PCHAS_1202700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1202700
old locus tag: PCHAS_120270
so part of: sequence
location: <95859..>96695
location: region:95859-96695:1
so has part: feature:95859-96695:1:exon
subclass of: SO_0000010

3494360
type: Gene
SIO_000068: ncbigene

position:95859:1
position: 95859
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:96695:1
position: 96695
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95859-96695:1:exon

PCHAS_1202700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1202700
old locus tag: PCHAS_120270
product: inner membrane complex protein 1c, putative
transcript id: XM_736187.1
SIO_010081: PCHAS_1202700
subclass of: SO_0000673
so part of: PCHAS_1202700
location: <95859..>96695
location: region:95859-96695:1
so has part: feature:95859-96695:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95859-96695:1:exon

PCHAS_1202700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1202700
old locus tag: PCHAS_120270
note: term=annotation;date=20140315;qualifier=removed_pro duct=membrane skeletal protein, putative;qualifier=added_product=inner membrane complex protein 1c, putative;qualifier=added_gene_name=imc1c;qualifier=added_g ene_synonym=alv5;qualifier=added_literature=pmid:15533999; qualifier=added_literature=pmid:18359944;curatorName=ucb@s anger.ac.uk; term=annotation;date=20150824;qualifier=added_GO:0070258;q ualifier=added_GO:0005737;qualifier=added_literature=pmid: 25185663;curatorName=ucb@sanger.ac.uk; ;query 254-254;GPI_cleavage_site_score=0.76; pfam_scan;Pfam:PF12314.4; E()=2.2E-28;score=98.3;query 59-152;description=IMCp; pfam_scan;Pfam:PF12314.4; E()=8.5E-5;score=22.6;query 38-72;description=IMCp; iprscan;InterPro:IPR022086 : Inner membrane complex protein;Pfam:PF12314; score=1.6E-4;query 38-71;description=Inner membrane complex protein; iprscan;InterPro:IPR022086 : Inner membrane complex protein;Pfam:PF12314; score=2.0E-28;query 59-152;description=Inner membrane complex protein
codon start: 1
product: inner membrane complex protein 1c, putative
translation: MDNSHLTRNSYQKIDNIDTKETSTVDRKWVALTAYQPVDVVTKTVEVPVIKTVEKFVPKTIIQEKIIHVPKNVTHIVEKIVEVPEVKYIEKIVEVPHIHYKNKYVPKIEVVEKIVERQKIIEKWHDKIVEVPQIKEVVRYKEIEDTEEVIKYVPKDSKNINWEEEYKKYTEGKPGRFSLNNTCQQKMNSYNQLNENAYARNSYSRSLNIMNSKSANDQTNMRSEDFSQVNFFNQYNGESMDQHIMMPSSSFNMNGSFQFKRLPSEEAKPVGCCTGACR
SIO_010081: PCHAS_1202700
subclass of: SO_0000673
so part of: PCHAS_1202700
location: 95859..96695
location: region:95859-96695:1
so has part: feature:95859-96695:1:exon

XP_741280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95859-96695:1:exon

PCHAS_1202800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1202800
old locus tag: PCHAS_120280
so part of: sequence
location: complement(<97894..>101334)
location: region:97894-101334:-1
so has part: feature:97894-101334:-1:exon
subclass of: SO_0000010

3490442
type: Gene
SIO_000068: ncbigene

position:97894:-1
position: 97894
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:101334:-1
position: 101334
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97894-101334:-1:exon

PCHAS_1202800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1202800
old locus tag: PCHAS_120280
product: MKT1 domain-containing protein, putative
transcript id: XM_732327.2
SIO_010081: PCHAS_1202800
subclass of: SO_0000673
so part of: PCHAS_1202800
location: complement(<97894..>101334)
location: region:97894-101334:-1
so has part: feature:97894-101334:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97894-101334:-1:exon

PCHAS_1202800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1202800
old locus tag: PCHAS_120280
note: term=annotation;date=20161108;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=mkt1 domain-containing protein, putative;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF12246.4; E()=1.3E-26;score=93.2;query 725-898;description=MKT1_C; pfam_scan;Pfam:PF12247.4; E()=1.4E-18;score=66.8;query 478-561;description=MKT1_N; iprscan;InterPro:IPR029060 : PIN domain-like;Superfamily:SSF88723; score=1.73E-28;query 3-221;description=PIN-like domain superfamily; iprscan;InterPro:IPR022039 : Temperature dependent protein affecting M2 dsRNA replication, C-terminal;Pfam:PF12246; score=1.0E-26;query 725-898;description=Temperature dependent protein affecting M2 dsRNA replication, C-terminal; iprscan;InterPro:IPR022040 : Temperature dependent protein affecting M2 dsRNA replication, N-terminal;Pfam:PF12247; score=2.0E-18;query 478-561;description=Temperature dependent protein affecting M2 dsRNA replication, N-terminal
codon start: 1
product: MKT1 domain-containing protein, putative
translation: MRVRHLQSYLTEHGLLKRSSIEDIKNLRLGIDALYFLRASDNLKDILSDVSGCISPCIFHLVDKQCEYFRKYNIDIIFVFDGITPKSHKLFSAQYQQNIEQGWVYYVNNELKLSYEKFSQVSNICNSYLAFLLFHYLKSKGYKCIYAPYLAISQLSYFLANNIIDTILGPPTLILYNPQNAILNIIWEENYFEWIDLNSLLKIWNINKEQFIDACLLAGTEYCLTFPYLNLSHFNSGNSEFNFGNSIEFIKQSPLISYLQHFPNDQLKKSYIEGYRVCKSILKFPIVLLLSGEVGFFSYKDKNFYNTDNAYDNNLLNKIDQAEKIKDENYEESEYNKSFNMNGNLYNLCNENIKDLTTIDTLVDSYDSGKMNSGDRSTEPGKISEDAYTDNLSYTKNNVHIENGKEIQEDNSKKHELDCKDGSIDKENNSENGFETTENINMKEKDEHTKNKDIENKDKEGVKIDDGKNEDMNYEGVPHDYIKVIGSRFPACVYYLMSIGLLSKKILCVLAQGEWIDYSHPILDSFEYRDSLIDLREYRCRILGLISVKLNPYFYKRKIKFFDYGYYINNVLEKNNKFTYLDISLIDGFLWNINKNNIIEEEKRQNNKQVDLQFILKWHLYCESMNMSLVCKNEAIQEEGSNSEGDDNSDKNSNVGSEDSRKVRDSSEGNNNESEEGKEDHKIRKKNKEKYNDKIIKNYNNYYKNILNTDNQNFNSILCIVYYMFLENLGIFTKRCGVTLFGLLLSESKNKSIDNNILIIFELLKFGFLTTHPLLPPNGKKYPENAYSAINNSKNLKDQDKKSVLLLSRIYSLYSSNTNKEIRYDGLIDFDLCAFFSVVKIIIKTLRQLMQACIANVLITNMELIHLLPDNLYSQLDSSISYFFVTDHLMGVLTKYFLLFDFDDLKKEIYKHDISLENCNQTPVDEKGEGLCATSNCSGNSDIIIENNDEHYDHINKDKNTKDEKERSNSTADGMNTNKNAEEMHNIKNCNAQNNQELSNESGKNNISEKSGIYNNTEEGKDNTNSEDINEKHDNKCNNDNNKMGIGGGNVNSGAEEDKLINKFNLFEKEVRKNFPSFLNPIIDLCNAINTWRDHLNLIIKLEQHTNVYDLVSDLKAANTFLEKKIQYIGLDKCATYIDICSNHNA
SIO_010081: PCHAS_1202800
subclass of: SO_0000673
so part of: PCHAS_1202800
location: complement(97894..101334)
location: region:97894-101334:-1
so has part: feature:97894-101334:-1:exon

XP_737420.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97894-101334:-1:exon

PCHAS_1202900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1202900
old locus tag: PCHAS_120290
so part of: sequence
location: complement(<104020..>107589)
location: region:104020-107589:-1
so has part: feature:104020-107589:-1:exon
subclass of: SO_0000010

3495751
type: Gene
SIO_000068: ncbigene

position:104020:-1
position: 104020
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:107589:-1
position: 107589
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104020-107589:-1:exon

PCHAS_1202900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1202900
old locus tag: PCHAS_120290
product: U5 small nuclear ribonucleoprotein component, putative
transcript id: XM_737565.2
SIO_010081: PCHAS_1202900
subclass of: SO_0000673
so part of: PCHAS_1202900
location: complement(<104020..>107589)
location: region:104020-107589:-1
so has part: feature:104020-107589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104020-107589:-1:exon

PCHAS_1202900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1202900
old locus tag: PCHAS_120290
note: term=annotation;date=20170406;qualifier=removed_pro duct=U5 small nuclear ribonuclear protein, putative;qualifier=added_product=u5 small nuclear ribonucleoprotein component, putative;qualifier=added_gene_name=eftud2;qualifier=added_ GO:0003723;qualifier=added_GO:0046540;qualifier=added_GO:0 000398;qualifier=added_literature=pmid:21245033;curatorNam e=ucb@sanger.ac.uk; pfam_scan;Pfam:PF03764.14; E()=1.9E-15;score=56.6;query 938-1043;description=EFG_IV; pfam_scan;Pfam:PF00009.23; E()=2.5E-36;score=124.9;query 156-420;description=GTP_EFTU; pfam_scan;Pfam:PF00679.20; E()=9.8E-21;score=73.5;query 1046-1134;description=EFG_C; pfam_scan;Pfam:PF03144.21; E()=2.8E-10;score=40.3;query 602-675;description=GTP_EFTU_D2; pfam_scan;Pfam:PF16004.1; E()=8.6E-11;score=42.4;query 6-108;description=EFTUD2; iprscan;InterPro:IPR035647 : EF-G domain III/V-like;Superfamily:SSF54980; score=4.65E-25;query 1049-1135;description=EF-G domain III/V-like; iprscan;InterPro:IPR035647 : EF-G domain III/V-like;Superfamily:SSF54980; score=3.96E-16;query 732-807;description=EF-G domain III/V-like; iprscan;InterPro:IPR000640 : Translation elongation factor EFG/EF2, C-terminal;SMART:SM00838; score=1.4E-13;query 1046-1135;description=Elongation factor EFG, domain V-like; iprscan;InterPro:IPR000640 : Translation elongation factor EFG/EF2, C-terminal;Pfam:PF00679; score=1.9E-20;query 1046-1134;description=Elongation factor EFG, domain V-like; iprscan;InterPro:IPR009000 : Translation elongation and initiation factors/Ribosomal, beta-barrel;Superfamily:SSF50447; score=1.11E-28;query 549-678;description=Translation protein, beta-barrel domain superfamily; iprscan;InterPro:IPR004161 : Translation elongation factor EFTu/EF1A, domain 2;Pfam:PF03144; score=3.7E-10;query 602-675;description=Translation elongation factor EFTu-like, domain 2; iprscan;InterPro:IPR020568 : Ribosomal protein S5 domain 2-type fold;Superfamily:SSF54211; score=2.5E-43;query 809-1048;description=Ribosomal protein S5 domain 2-type fold; iprs…
codon start: 1
product: U5 small nuclear ribonucleoprotein component, putative
translation: MESKNNLYDEFGNYIGEDIDSDEEEYSDEADESKDGDSEDRSDESNSNVESKDEEEEDEDDYDLSGNKDNKMDENDIDELKKVYDGAEVFIEEEDTQDIEQATINKINANVERISFIKKLDVEANRKNFDLVETSLPNNNFSFKYLSELMAHTDYIRNICIAGHFHHGKTTLVDRLIEYTREKTKGDSYFINKSAGGNNNNGSSTVSFFKLSDEFDEVIKKNINKNEKNTITPYNSKKMNCLTSYTDTRLDEQARGLSIKSIPISLIFQNKVYENIPNNILLDKKPQNLKYKSYLFNIIDTPGHVNFFDEFLCSLNICECCCLVVDVVDGCMYVTENVIKACIYENVKIILVLNCIDKLIMDLRLPPNDAYHKISYSIEEINMKIETICNLLNKTEEEKNSWLLSPLKNNVLFSSSLYGIFFSLKSFSKIYCDLHNSYSINIDEFSKYLWGDIYYDEEKFKFVQSPVYSNQKRSFVEFILFPIYKIFGYVTSEEKDFLIPFLKKLNVTLKKTDYLFNNKYLLKKICTMIFEDTTAFVDVVIDNCPSPLENAKNKTISIYSGSLKTKVCYDMMRCLKGDQTDNLMVYIIKNYHRPECLVLDLFGRVMCGTLKKGQTVRILGEGYTLEDDEDMISRVITHLWIYEGRYRVEVDEVPAGNFVLIGGIDICVNKTCTITNMKRKGNKKKGVFEKKNNNTDLGIMRGGLNDEKLFFNDDEDAEIFYPFNKKFRYIICANSVFKVACEPINPSELPKMLDGLRKIDKTYPLASTKVEESGEHIVLGTGELYLDCVLHDLRKLYGDLEIKVSDPVVQFNETITEASALNCFAETPNKKNKIYMISEPIQKELMDDIVQGLVHLKKNDNSNVDEYLHTMDKLLMKRGDKRADLLENDEDSKNSDEDNNENSEDGSSKETDVKLDDDAEKRKSTLNYNIDQDVISLLTNKHNWDILSIRSIWEFGPENNSPNILMDESLYNETNKDNLYSIKNNIIQGFCWATKEGPLIEENMKNVKVKILRADIDDDPINRGAGQIIPTTRRAIYSSFLLATPRLLEPILFTEIICSGDSVSSVYNVLSRRRGHVLKDFPKVGTPLYMVHAYIPAIESFGFETDLRTHTSGQAFCLSMFDHWHIVPGDPLDKSVILRPLEPSPIQHLAREFLLKTRRRKGLTEDVTINRFFDDPMLLNIKGEFSEYF
SIO_010081: PCHAS_1202900
subclass of: SO_0000673
so part of: PCHAS_1202900
location: complement(104020..107589)
location: region:104020-107589:-1
so has part: feature:104020-107589:-1:exon

XP_742658.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104020-107589:-1:exon

PCHAS_1203000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1203000
old locus tag: PCHAS_120300
so part of: sequence
location: <109277..>110217
location: region:109277-110217:1
so has part: feature:109277-110217:1:exon
subclass of: SO_0000010

3498029
type: Gene
SIO_000068: ncbigene

position:109277:1
position: 109277
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:110217:1
position: 110217
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109277-110217:1:exon

PCHAS_1203000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1203000
old locus tag: PCHAS_120300
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798785.1
SIO_010081: PCHAS_1203000
subclass of: SO_0000673
so part of: PCHAS_1203000
location: join(<109277..109650,109818..>110217)
location: region:109277-110217:1
so has part: feature:109277-109650:1:exon
so has part: feature:109818-110217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109277-109650:1:exon

position:109650:1
position: 109650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109818-110217:1:exon

position:109818:1
position: 109818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1203000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1203000
old locus tag: PCHAS_120300
note: pfam_scan;Pfam:PF15867.1; E()=2.0E-19;score=69.1;query 10-69;description=Dynein_attach_N; iprscan;InterPro:IPR031733 : Dynein attachment factor, N-terminal;Pfam:PF15867; score=1.9E-19;query 10-68;description=Dynein attachment factor, N-terminal
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MDINNYTDSMNIKKLRNEFVQSILKDEEYKKKDDKKKDIVKTCKSYKEFCDIVSVINMKPIKKYEEKVTYEDYVTMNHSTNNLDKLKKKKNHLKFFSINHLENNQNYPLLNDSQSIIQKKIKQFLNTLDNNKDNYYKFIKFNYNCDEIKDVINFIKNNWSTFFEIDEVAVHNNIMDNEQMNKKKNITFSNLIQFFFNLIKYWNEEKLFLYFTPDELKDINSNINMIAQNLKNIKLSPNEDNIINDIVCYIKSIDLSP
SIO_010081: PCHAS_1203000
subclass of: SO_0000673
so part of: PCHAS_1203000
location: join(109277..109650,109818..110217)
location: region:109277-110217:1
so has part: feature:109277-109650:1:exon
so has part: feature:109818-110217:1:exon

XP_016654155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109277-109650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109818-110217:1:exon

PCHAS_1203100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1203100
old locus tag: PCHAS_120310
so part of: sequence
location: complement(<110546..>111451)
location: region:110546-111451:-1
so has part: feature:110546-111451:-1:exon
subclass of: SO_0000010

3498028
type: Gene
SIO_000068: ncbigene

position:110546:-1
position: 110546
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:111451:-1
position: 111451
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110546-111451:-1:exon

PCHAS_1203100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1203100
old locus tag: PCHAS_120310
product: 60S ribosomal protein L13, putative
transcript id: XM_016798786.1
SIO_010081: PCHAS_1203100
subclass of: SO_0000673
so part of: PCHAS_1203100
location: complement(join(<110546..111142,111440..>111451))
location: region:110546-111451:-1
so has part: feature:111440-111451:-1:exon
so has part: feature:110546-111142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111440-111451:-1:exon

position:111440:-1
position: 111440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:110546-111142:-1:exon

position:111142:-1
position: 111142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1203100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1203100
old locus tag: PCHAS_120310
note: pfam_scan;Pfam:PF00572.14; E()=2.3E-9;score=37.5;query 6-115;description=Ribosomal_L13; iprscan;InterPro:IPR005822 : Ribosomal protein L13;PIRSF:PIRSF002181; score=8.8E-41;query 1-157;description=Ribosomal protein L13; iprscan;InterPro:IPR005822 : Ribosomal protein L13;Pfam:PF00572; score=1.2E-9;query 6-115;description=Ribosomal protein L13; iprscan;InterPro:IPR023563 : Ribosomal protein L13, conserved site;Prosite:PS00783; score=1.0;query 83-106;description=Ribosomal protein L13, conserved site; iprscan;InterPro:IPR036899 : Ribosomal protein L13 superfamily;Superfamily:SSF52161; score=1.7E-46;query 6-148;description=Ribosomal protein L13 superfamily; iprscan;InterPro:IPR005755 : Ribosomal protein L13, eukaryotic/archaeal;TIGR_TIGRFAMS:TIGR01077; score=6.2E-51; query 7-148;description=Ribosomal protein L13, eukaryotic/archaeal
codon start: 1
product: 60S ribosomal protein L13, putative
translation: MYKKEYVIDCKGHMLGRLASIIAKELLNGQRIVAVRCEDIDISGSLYRNKLKYQEFLRLRTNTNPKKGPLHLREPSKILWRCVRGMLPHKTPKGKIALSKLKVLVGMPHPYDKKKKYVLPGALRAFRLQKHRRFCRLGTLSSRVGWNYDELVKKREKVRKELSKTYFKKKVSLLNEKKKIKEEALGLIKPEERNILENFGYI
SIO_010081: PCHAS_1203100
subclass of: SO_0000673
so part of: PCHAS_1203100
location: complement(join(110546..111142,111440..111451))
location: region:110546-111451:-1
so has part: feature:111440-111451:-1:exon
so has part: feature:110546-111142:-1:exon

XP_016654156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111440-111451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110546-111142:-1:exon

PCHAS_1203200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1203200
old locus tag: PCHAS_120320
so part of: sequence
location: complement(<113534..>121299)
location: region:113534-121299:-1
so has part: feature:113534-121299:-1:exon
subclass of: SO_0000010

3498323
type: Gene
SIO_000068: ncbigene

position:113534:-1
position: 113534
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:121299:-1
position: 121299
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113534-121299:-1:exon

PCHAS_1203200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1203200
old locus tag: PCHAS_120320
product: WD repeat-containing protein, putative
transcript id: XM_016798787.1
SIO_010081: PCHAS_1203200
subclass of: SO_0000673
so part of: PCHAS_1203200
location: complement(join(<113534..119181,119280..>121299))
location: region:113534-121299:-1
so has part: feature:119280-121299:-1:exon
so has part: feature:113534-119181:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119280-121299:-1:exon

position:119280:-1
position: 119280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113534-119181:-1:exon

position:119181:-1
position: 119181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1203200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1203200
old locus tag: PCHAS_120320
note: term=annotation;date=20150629;qualifier=removed_pro duct=conserved Plasmodium membrane protein, unknown function;qualifier=added_product=wd repeat-containing protein, putative;qualifier=added_literature=pmid:26043001;curatorN ame=ucb@sanger.ac.uk; ;query 2066-2069; ;query 2131-2368; ;query 2043-2065; ;query 2070-2091; ;query 2111-2130; ;query 2369-2391; ;query 1-2042; ;query 2092-2110; ;query 2392-2555; ;query 2527-2527;GPI_cleavage_site_score=0.172; tmhmm; query 1-2556; iprscan;InterPro:IPR036322 : WD40-repeat-containing domain superfamily;Superfamily:SSF50978; score=3.21E-12;query 19-283;description=WD40-repeat-containing domain superfamily; iprscan;InterPro:IPR036322 : WD40-repeat-containing domain superfamily;Superfamily:SSF50978; score=1.12E-5;query 1046-1356;description=WD40-repeat-containing domain superfamily; iprscan;InterPro:IPR036322 : WD40-repeat-containing domain superfamily;Superfamily:SSF50978; score=7.94E-11;query 2417-2502;description=WD40-repeat-containing domain superfamily; iprscan;InterPro:IPR001680 : WD40 repeat;Pfam:PF00400; score=0.0015;query 2455-2493;description=WD40 repeat; iprscan;InterPro:IPR001680 : WD40 repeat;SMART:SM00320; score=270.0;query 2413-2450;description=WD40 repeat; iprscan;InterPro:IPR001680 : WD40 repeat;SMART:SM00320; score=4.9E-4;query 2453-2493;description=WD40 repeat; iprscan;InterPro:IPR001680 : WD40 repeat;SMART:SM00320; score=190.0;query 220-258;description=WD40 repeat
codon start: 1
product: WD repeat-containing protein, putative
translation: MNEDLKLGSVIWPNFSSPFNITCYGLNYEGNILAVGSREGNIVLFRAEENEKLINNTSGNNNTSSNEAGVASNESGNKILSNNLKQFNSNKCNDGMEKNEIRDNECKEVGKNEDKKMGIDSNCEEANKSGSLNSTSNSFENFSKGDENSQPHKNYDEEMNNRIKLVPYNILLNNKNNGCNNSVTQLCFGLSCSHFIECVSREILISLYVDNTIALWSLDEGRCFKIFNSFNFYIYNMRILQDRRFILVCGYKDLLVIDLWANPDKEVVARLSIENKESNDEVGKSGDVSDPEGSNGTHYDIADSDINYKMCSSSSDNLESNDFSMVNSRGVDNCKENNEGGDEIIDGLHEDVSVKHSSPSFVTNISERNRYSKHSYYDNSQFLNYKLYYDKKKNENSDKNLNLKICCISAGLVPYLKKENQRSLAQCMKLLKRKFFNIYEKRERTNLNYGDIGGSDNNNMRGDELDEEYIKLREKETYKNLNDLFYCPILISAWLNNGDIICWDLTDLLNFYKNKTRFVIRPDKTEIETYNEKIEDMAENCIYNELIKNKIHVPNDINLKSQDKNLKNTDIYEQTDGVYNVNPIFISNLPTSKSDLEISANGNSSQIAIIDNYIVILQKNRLIIYERKNANSSFVPLMDLFCPDFDQSCKKRTRNAHWIGIQVLRKPIWRFSSGTSQSSSSKIRSFNIMQNMSKNICGCIVAWTTEGNFYCYTLPLKFSSMFLSFQSNIKSYFLMKVDKNLLGSFKSPGPILFYRNTYSTSEKDADLYEKNISNSSCIFSPIKHNNEHTDVIHLNNSNEEMMSNKYSNIYNVRTSTYSYSTVNKKCLNERTNLCEIEKNTFSIESTKLKSNNIYNEDTNVLKIKNNNYRKNKNKSSIWGDDVFFLFVNKSKLNRIIVYEYLFDIWYTTNKIDSIWLLGKIKDKKKINNILEDNERGYKYGENNYDVIKSQIEAVKNCKINLEKMYVKEMNNNVYNRKENIEHDENEDREIITYAFCEYNLNIYVIISYRDTRVVCVLINCYKYVENKKIIYDLHIPDSLYKKKNFITALHAENNYIIGGTDGGDILIWNVYNFSLVKFIKKCHFSYICSIYKVVTDNYLKKNNVNISTEREDTSFILTCDASNHMILINLSNIDYNNNHNNFFCKNDECNIIISSEDNIDSVLFWKKEKERLQKNLMKRKKSKSFEINICNKTDRVYIRRTSSGKINYKNKKKRKDSSQISYVNTAFKRSSVIHSENRYKLINILNFKNAIKNYQEKNNNSNIYNISLLKAKKSIIKLKKKTWDKRYEMERKLKVMTHVCFHCCFKKLEKKNEINFKLINNVYINSYSSLLYISLMNNYVYIYNYKNGNFLRYLYDSQYSQISNIPFENVYTRLGVSISNIQLLNKIKVKKDATPYLHESNTESEITSDDVYDESSSCSSQLTSSSHSLESIQQFLSSDGMEISNEDYTTSDSCLSKKNGMHSKTTQLKKNKFNSFSYNNLSNIIRKKNNKKTSYLLVKSQIPIISHILFRDNHLSKKALPLGRLLYHHFLPEKCINLCKELFFFLTDFPSLPFSMCVHGKESTCSVIIPKYTQLCYFSKMYPLKLRREKFRKNIDETENEDIINYRTNTKELYIFLSAEKRKKKKKKKFFYDSLNIDYKDIYNKQFKNKYFLNDSLRKKYIYFGLKFGTKQNENKHKVSELMNKWKSVYGDREENWDGEDNQDMLKKWKINKDNNLYTIKVNDKWELPNSSNSIYKEIEINYEKKTDKNYNRRNNNLYILQYNCSNNRNIERNKNIDIDNQKQWMSSYLDDEMDEWDSCDSSSSKSSIYLYIPKNKNKNKKHISKNVRSSVHRVSDTDKNVTTPSRRSEIKGNKYGEEVDIKKKLMNSMNMFSKRENKKIKKRNKVDISYFFNDNSVEICCESLYVNTLYFCFILRFVSSWFKMCRDKYNDNILINFKKYIIYNLPNNNKINLFLLSYISMYPYDKSIRIQLQKFMFILIQNMKNICLDKYSKLATEIL…
SIO_010081: PCHAS_1203200
subclass of: SO_0000673
so part of: PCHAS_1203200
location: complement(join(113534..119181,119280..121299))
location: region:113534-121299:-1
so has part: feature:119280-121299:-1:exon
so has part: feature:113534-119181:-1:exon

XP_016654157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119280-121299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113534-119181:-1:exon

PCHAS_1203300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1203300
old locus tag: PCHAS_120330
so part of: sequence
location: complement(<123482..>126310)
location: region:123482-126310:-1
so has part: feature:123482-126310:-1:exon
subclass of: SO_0000010

3498005
type: Gene
SIO_000068: ncbigene

position:123482:-1
position: 123482
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:126310:-1
position: 126310
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123482-126310:-1:exon

PCHAS_1203300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1203300
old locus tag: PCHAS_120330
product: E3 ubiquitin-protein ligase, putative
transcript id: XM_739793.2
SIO_010081: PCHAS_1203300
subclass of: SO_0000673
so part of: PCHAS_1203300
location: complement(<123482..>126310)
location: region:123482-126310:-1
so has part: feature:123482-126310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123482-126310:-1:exon

PCHAS_1203300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1203300
old locus tag: PCHAS_120330
note: term=annotation;date=20140224;qualifier=removed_pro duct=zinc finger, C3HC4 type, putative;qualifier=added_product=e3 ubiquitin-protein ligase, putative;qualifier=added_ec_number=6.3.2.- '';curatorName=ucb@sanger.ac.uk; term=annotation;date=20150824;qualifier=added_GO:0016567;c uratorName=ucb@sanger.ac.uk; ;query 911-911;GPI_cleavage_site_score=0.442; pfam_scan;Pfam:PF13639.2; E()=1.9E-11;score=43.9;query 321-367;description=zf-RING_2; iprscan;InterPro:IPR001841 : Zinc finger, RING-type;Pfam:PF13639; score=2.0E-10;query 321-367;description=Zinc finger, RING-type; iprscan;InterPro:IPR001841 : Zinc finger, RING-type;SMART:SM00184; score=0.0011;query 322-366;description=Zinc finger, RING-type; iprscan;InterPro:IPR001841 : Zinc finger, RING-type;Prosite:PS50089; score=12.002;query 322-367;description=Zinc finger, RING-type; iprscan;Superfamily:SSF57850; score=4.29E-17;query 310-373;description=null
codon start: 1
product: E3 ubiquitin-protein ligase, putative
translation: MNQVDDYEYFCHSCEDVKRTSDVEIICDGELKCKSCNNVGFVEKIDEDDPVSFHSVHYNRDNRSNANNSDQNSPNNSNRNSSYTRSSNGHRNSSSHIGGSRSNGNYRIEFTNSGNAFNPNDNIFSDMMFFRNMYQQIYSTGFRTVDGNINFTSHFEPSTNSNRANEASAESNNGNNARNSGNGNGNRNDWFSRVFFGTNSRPSNLSSNNTSNNSSSNNDNNNGGTGASQNNNTRNIRNPRIVTRAIDITNIPLNSPIRLNFHDIIDNILTNSFDNISLDQVLTIIMESDPSRNGPPPASEEIIKNLKVEKLTLERAQELESCAICREEYKENDEVHRITDNERCRHVFHCDCIIPWLKERNSCPTCRFELPTDDQEYNCKREELRERINSEISRNNSLNNSNNVDVSQDESGTGANNGETNDENGAEEKPDNENEERTNGENRNRETNENGDRTSSRNRRGNESGSRTETRYLQFGDENDLNGLGDFTTMNTSSLIQNIFNNFINGTNNEGSGVSRIFFPQQGSNRNGNRNSDARNIFEESQLRPEHVIVNITGSIDEISGFPTSNNNIFQNSGRNEANNNRERGSDNGNNNNNNTTNRNASNERNGSRGRDNSSSAPRIGENIFGTSNFFSSSNLSGLQNLFDSNNLFDTASVIITNISNHNNPSSSTNSGSMRFPNVFNNINEFYTNISNLHGERNGSASSPTDSNNNQANNTNNKENPKNASDEAGNNNKNGTKKIEKRIYEKVQPSYNERDNNNNSSGSRRSRNDDTEEEIIRKKSKNCENYDDEDKYTEMNRSTNRDNNKEDEENEKSNTSVTNSGENNGENGDNNSECKNPEKQKTVKKYIFNKFNWLKNYDNKEKKKKTEKNNDKKDSSRIQDDDINYNNEKEGNIIESETLGKDNKSGYSVEDGGNEEANKSDTYLGGKGKEDVNDMKENFSND
SIO_010081: PCHAS_1203300
subclass of: SO_0000673
so part of: PCHAS_1203300
location: complement(123482..126310)
location: region:123482-126310:-1
so has part: feature:123482-126310:-1:exon

XP_744886.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123482-126310:-1:exon

PCHAS_1203400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1203400
old locus tag: PCHAS_120340
so part of: sequence
location: complement(<129146..>131005)
location: region:129146-131005:-1
so has part: feature:129146-131005:-1:exon
subclass of: SO_0000010

3494971
type: Gene
SIO_000068: ncbigene

position:129146:-1
position: 129146
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:131005:-1
position: 131005
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129146-131005:-1:exon

PCHAS_1203400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1203400
old locus tag: PCHAS_120340
product: RNA-binding protein, putative
transcript id: XM_736794.2
SIO_010081: PCHAS_1203400
subclass of: SO_0000673
so part of: PCHAS_1203400
location: complement(<129146..>131005)
location: region:129146-131005:-1
so has part: feature:129146-131005:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129146-131005:-1:exon

PCHAS_1203400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1203400
old locus tag: PCHAS_120340
note: pfam_scan;Pfam:PF00076.18; E()=1.8E-12;score=46.7;query 317-384;description=RRM_1; pfam_scan;Pfam:PF00076.18; E()=1.1E-12;score=47.4;query 200-261;description=RRM_1; iprscan;InterPro:IPR000504 : RNA recognition motif, RNP-1;Prosite:PS50102; score=13.788;query 198-268;description=RNA recognition motif domain; iprscan;InterPro:IPR000504 : RNA recognition motif, RNP-1;Prosite:PS50102; score=11.435;query 315-393;description=RNA recognition motif domain; iprscan;InterPro:IPR000504 : RNA recognition motif, RNP-1;Pfam:PF00076; score=1.1E-12;query 200-261;description=RNA recognition motif domain; iprscan;InterPro:IPR000504 : RNA recognition motif, RNP-1;Pfam:PF00076; score=2.0E-12;query 317-384;description=RNA recognition motif domain; iprscan;InterPro:IPR000504 : RNA recognition motif, RNP-1;SMART:SM00360; score=1.1E-9;query 316-389;description=RNA recognition motif domain; iprscan;InterPro:IPR000504 : RNA recognition motif, RNP-1;SMART:SM00360; score=3.2E-15;query 199-264;description=RNA recognition motif domain; iprscan;InterPro:IPR035979 : RNA-binding domain superfamily;Superfamily:SSF54928; score=2.73E-33;query 196-394;description=RNA-binding domain superfamily
codon start: 1
product: RNA-binding protein, putative
translation: MHTKEKEPYHGGERRRYSSRSRENVRDRSGGRENVRDRSGGRENVRDRSGGREHYRRSHDDNYNKRYEGGNIERNRNYSKDRKYYNNGPPHNDHHNYPRDRFYNRSPKRNFSKERNNDKHIYDRGHNHEWNNNHHGGNYYNNSYRGRNDRMDTKRYSMDRDRGRPHYDNHHNNMNNGMMRRERSKEMRSHAYKKGDPCKIFVGNISPDAREEEVRRKFAKYGDIINIQWKRRFAFIEYSKPIYAENAIHEENGKHYMGEELSVQAHHLSPFKNSYSGNYGNSYNNYKSDPRNYENKYSRNYSDNKFESIEKKNSLRIVVKNIDEKVSWQDLKDFGREVGSVNYANVIYNNNGNNKEWYGIIEYYNYETMKRAVEVLNGKKFNGVPVEVIKYTDSSVSSFYKNKERENDHHYYNNKDKGHNYHGPGGDKKYYDYDRDKMHRDDRREYNRRSNSGSYHRENGEGNYTRKRPNNRSEDMDRDRREKEYNEGDEGKDDHRRSLAEGRDNNFSDREDTKKIRKTTSNRYGRNNKTENQNSSKKTKDEEYSVEREGSARYEENGYSGNDKDQDSRNQSIEQSPSSNSKRKPYKRNTTRRNNKTSEEYSPKDDRDVIYDDNTNPDK
SIO_010081: PCHAS_1203400
subclass of: SO_0000673
so part of: PCHAS_1203400
location: complement(129146..131005)
location: region:129146-131005:-1
so has part: feature:129146-131005:-1:exon

XP_741887.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129146-131005:-1:exon

PCHAS_1203500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1203500
old locus tag: PCHAS_120350
so part of: sequence
location: complement(<134423..>135028)
location: region:134423-135028:-1
so has part: feature:134423-135028:-1:exon
subclass of: SO_0000010

3495691
type: Gene
SIO_000068: ncbigene

position:134423:-1
position: 134423
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:135028:-1
position: 135028
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134423-135028:-1:exon

PCHAS_1203500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1203500
old locus tag: PCHAS_120350
product: conserved Plasmodium protein, unknown function
transcript id: XM_737507.1
SIO_010081: PCHAS_1203500
subclass of: SO_0000673
so part of: PCHAS_1203500
location: complement(<134423..>135028)
location: region:134423-135028:-1
so has part: feature:134423-135028:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134423-135028:-1:exon

PCHAS_1203500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1203500
old locus tag: PCHAS_120350
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MSTVEELKFIWNFLFSDISSEKGESDNGNAAYKENIILLKKLMLTENIKFEQKYNATSILEKLKGVKDVQYDDILNDYANKFLTFLKESFENVADEIQINDKISYRRNELIKQELNNKLQNLNNNYNLEYIGLNKCLGTEDFEKQINASLKFNSLKDILSKLLIEMKEYENQYNKLLETDKFLDLKMYELENYLNNVNETS
SIO_010081: PCHAS_1203500
subclass of: SO_0000673
so part of: PCHAS_1203500
location: complement(134423..135028)
location: region:134423-135028:-1
so has part: feature:134423-135028:-1:exon

XP_742600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134423-135028:-1:exon

PCHAS_1203600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1203600
old locus tag: PCHAS_120360
so part of: sequence
location: <136412..>140343
location: region:136412-140343:1
so has part: feature:136412-140343:1:exon
subclass of: SO_0000010

3492536
type: Gene
SIO_000068: ncbigene

position:136412:1
position: 136412
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:140343:1
position: 140343
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136412-140343:1:exon

PCHAS_1203600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1203600
old locus tag: PCHAS_120360
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798789.1
SIO_010081: PCHAS_1203600
subclass of: SO_0000673
so part of: PCHAS_1203600
location: join(<136412..136515,136681..139219,139339..139496,139618..139722,139851..140066,140175..>140343)
location: region:136412-140343:1
so has part: feature:136412-136515:1:exon
so has part: feature:136681-139219:1:exon
so has part: feature:139339-139496:1:exon
so has part: feature:139618-139722:1:exon
so has part: feature:139851-140066:1:exon
so has part: feature:140175-140343:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136412-136515:1:exon

position:136515:1
position: 136515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136681-139219:1:exon

position:136681:1
position: 136681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139219:1
position: 139219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:139339-139496:1:exon

position:139339:1
position: 139339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139496:1
position: 139496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:139618-139722:1:exon

position:139618:1
position: 139618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139722:1
position: 139722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:139851-140066:1:exon

position:139851:1
position: 139851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140066:1
position: 140066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:140175-140343:1:exon

position:140175:1
position: 140175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1203600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1203600
old locus tag: PCHAS_120360
note: term=structural;date=20110203;qualifier=method_exon =changed gene model, changed coordinates of eoxn 5 based on homology;curatorName=ucb@sanger.ac.uk; term=annotation;date=20180319;qualifier=added_GO:0016021;c uratorName=ucb@sanger.ac.uk; ;query 1-47; ;query 100-105; ;query 150-155; ;query 204-850; ;query 911-921; ;query 990-995; ;query 1042-1096; ;query 48-70; ;query 80-99; ;query 106-128; ;query 132-149; ;query 156-176; ;query 181-203; ;query 851-873; ;query 888-910; ;query 922-944; ;query 972-989; ;query 996-1015; ;query 1019-1041; ;query 71-79; ;query 129-131; ;query 177-180; ;query 874-887; ;query 945-971; ;query 1016-1018; tmhmm; query 1-1097
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MMKQFTKEYYSYFSVSRKKTLMVEKDIKTRYYSDRTAFRIKGNLKHVFVLDNVDATIGLSLMNVTIFLLGGLTNNRINVCISTYLQGLIFILSLMCYIIQTNFQKSIIADIFFVLLLFVSCILPFLSIKLNGCFNSIIFFPICIILLFSKYHLRNLFLLELGLILKILILIMAININETNIYIILLLLSSFFFSIIFYRYLYFFSKTISISFTTPKNLMMIFPYINEYQEICLLKLADIIIDTNNYMNIKLNVFCHDIPQINITQQKKHHENLQLNISRIINKFYTLKNQKIFLNFPPYYCLKALYYKKLNLMALYIEKKKKKIKKLYSQSHNTHLYFLLELSKKMKNCFIYYDIPCNHPPTNLLLNTGSTKESAPVLKEDKPQGDIIKKADPQKDVVKKREPKKDAVKRKEPKKDAAKRKEPKKDAVKEDKLRRAKQRDEKRYNDKRKEKQSKKKEIKRIISIFKNNLFYSKVCSKQLEDNPPKKIRIDNVKKNKIEKKAKINDLFTSTIRDDTKPELKGVRKNERTSKRDGKKRERLKEDQKRGEQIQRKRKNNYKNYESTLESSVTDNFMHIKPYDVNQIKKLDLRLVGKYRDTANEEVKNKLNKPRKKKDRSKNYAKQEMKTELDSKYKNRNHSDTKKHKKNNKKKFIEQRKHGHEMYQNLSNQEVYTKSSTEKNNVLDKTEYPIYDRYIRKYDDKTNYNILSKFKKSLEQKEKEIKCSFKINKNDNTYKYNELKGNDFIEINKKHKKKTDTSKQKSYSFYSNDNQYISDEKIIFINLSCLFYVLIHKIKQLLKYIEKINLVVQGLDFKQGVSPKQNFLLSFIDQKVERYYILWSNMFDLIYHIENYIIHILLILVFTFSSILIRIAPIHLSRSYMLFKIPSFIICFILRFFVFPIIAILIFMPIIKIKSVNPKNGFIIKIIFFILGIFIMILSVLDYLWTIVLVHKNYWNLDQAVRIALLNAYKCSLFSESEFVFFVPVFYFLIMHRLKSLWYLYIIWLFIINIIYWLFITSPLVGIKLNLSLITLIIMCILFIIRPFEIVKRDLFCRFVLPYILFLDDILHFVNNEKELKYLSYTDYPHTYTKTNTDTHT
SIO_010081: PCHAS_1203600
subclass of: SO_0000673
so part of: PCHAS_1203600
location: join(136412..136515,136681..139219,139339..139496,139618..139722,139851..140066,140175..140343)
location: region:136412-140343:1
so has part: feature:136412-136515:1:exon
so has part: feature:136681-139219:1:exon
so has part: feature:139339-139496:1:exon
so has part: feature:139618-139722:1:exon
so has part: feature:139851-140066:1:exon
so has part: feature:140175-140343:1:exon

XP_016654158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136412-136515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136681-139219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139339-139496:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139618-139722:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139851-140066:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140175-140343:1:exon

PCHAS_1203700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1203700
old locus tag: PCHAS_120370
so part of: sequence
location: complement(<140541..>141786)
location: region:140541-141786:-1
so has part: feature:140541-141786:-1:exon
subclass of: SO_0000010

3492535
type: Gene
SIO_000068: ncbigene

position:140541:-1
position: 140541
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:141786:-1
position: 141786
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140541-141786:-1:exon

PCHAS_1203700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1203700
old locus tag: PCHAS_120370
product: conserved protein, unknown function
transcript id: XM_016798790.1
SIO_010081: PCHAS_1203700
subclass of: SO_0000673
so part of: PCHAS_1203700
location: complement(join(<140541..140873,141005..141105,141220..141456,141651..>141786))
location: region:140541-141786:-1
so has part: feature:141651-141786:-1:exon
so has part: feature:141220-141456:-1:exon
so has part: feature:141005-141105:-1:exon
so has part: feature:140541-140873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141651-141786:-1:exon

position:141651:-1
position: 141651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141220-141456:-1:exon

position:141220:-1
position: 141220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141456:-1
position: 141456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:141005-141105:-1:exon

position:141005:-1
position: 141005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141105:-1
position: 141105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:140541-140873:-1:exon

position:140873:-1
position: 140873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1203700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1203700
old locus tag: PCHAS_120370
note: term=annotation;date=20180504;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk; ;query 1-27; ;query 28-50; ;query 51-268; ;query 247-247;GPI_cleavage_site_score=1.1019999; tmhmm; query 1-269
codon start: 1
product: conserved protein, unknown function
translation: MESENYYKKKSMFENGVSKKKRINKKSVFFSMTYLTITFIICFIGGIILGILTTSYTPEISIMENDENIFKFILKDDKIIIGGKLNINLNVKNNTLLSYTLHAKNVKYFYYPVGANPTCFLYNGGVEDASSNQLPLQHKSEIAIPLNQNENGFTTEIFLKIKYRLLNPFTYIYTIPLHLGYIILDSHKREIQSLYNDCKRFNILYFSVLFDELYISNKIKTINNDKRYELIFSCKCFVDSNVDNFFNSSPVNKNIILQDLNNNPNLLD
SIO_010081: PCHAS_1203700
subclass of: SO_0000673
so part of: PCHAS_1203700
location: complement(join(140541..140873,141005..141105,141220..141456,141651..141786))
location: region:140541-141786:-1
so has part: feature:141651-141786:-1:exon
so has part: feature:141220-141456:-1:exon
so has part: feature:141005-141105:-1:exon
so has part: feature:140541-140873:-1:exon

XP_016654159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141651-141786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141220-141456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141005-141105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140541-140873:-1:exon

PCHAS_1203800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1203800
old locus tag: PCHAS_120380
so part of: sequence
location: <142474..>143865
location: region:142474-143865:1
so has part: feature:142474-143865:1:exon
subclass of: SO_0000010

3489004
type: Gene
SIO_000068: ncbigene

position:142474:1
position: 142474
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:143865:1
position: 143865
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142474-143865:1:exon

PCHAS_1203800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1203800
old locus tag: PCHAS_120380
product: ADP/ATP carrier protein, putative
transcript id: XM_730912.2
SIO_010081: PCHAS_1203800
subclass of: SO_0000673
so part of: PCHAS_1203800
location: join(<142474..142681,142830..143162,143372..>143865)
location: region:142474-143865:1
so has part: feature:142474-142681:1:exon
so has part: feature:142830-143162:1:exon
so has part: feature:143372-143865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142474-142681:1:exon

position:142681:1
position: 142681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:142830-143162:1:exon

position:142830:1
position: 142830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143162:1
position: 143162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:143372-143865:1:exon

position:143372:1
position: 143372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1203800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1203800
old locus tag: PCHAS_120380
note: tmhmm; query 1-345; ;query 1-11; ;query 103-122; ;query 205-249; ;query 339-344; ;query 12-31; ;query 80-102; ;query 123-145; ;query 185-204; ;query 250-269; ;query 316-338; ;query 32-79; ;query 146-184; ;query 270-315; pfam_scan;Pfam:PF00153.23; E()=6.6E-7;score=29.0;query 248-340;description=Mito_carr; pfam_scan;Pfam:PF00153.23; E()=2.8E-8;score=33.4;query 19-108;description=Mito_carr; iprscan;InterPro:IPR023395 : Mitochondrial carrier domain;Superfamily:SSF103506; score=2.22E-38;query 20-332;description=Mitochondrial carrier domain superfamily; iprscan;InterPro:IPR002067 : Mitochondrial carrier protein;PRINTS:PR00926; score=2.6E-10;query 34-48;description=Mitochondrial carrier protein; iprscan;InterPro:IPR002067 : Mitochondrial carrier protein;PRINTS:PR00926; score=2.6E-10;query 137-155;description=Mitochondrial carrier protein; iprscan;InterPro:IPR002067 : Mitochondrial carrier protein;PRINTS:PR00926; score=2.6E-10;query 257-279;description=Mitochondrial carrier protein; iprscan;InterPro:IPR002067 : Mitochondrial carrier protein;PRINTS:PR00926; score=2.6E-10;query 83-103;description=Mitochondrial carrier protein; iprscan;InterPro:IPR002067 : Mitochondrial carrier protein;PRINTS:PR00926; score=2.6E-10;query 21-34;description=Mitochondrial carrier protein; iprscan;InterPro:IPR018108 : Mitochondrial substrate/solute carrier;Prosite:PS50920; score=10.692;query 248-341;description=Mitochondrial substrate/solute carrier; iprscan;InterPro:IPR018108 : Mitochondrial substrate/solute carrier;Prosite:PS50920; score=10.07;query 122-213;description=Mitochondrial substrate/solute carrier; iprscan;InterPro:IPR018108 : Mitochondrial substrate/solute carrier;Prosite:PS50920; score=12.923;query 16-108;description=Mitochondrial substrate/solute carrier; iprscan;InterPro:IPR018108 : Mitochondrial substrate/solute carrier;Pfam:PF00153; score=2.9E-8;query 19-108;description=Mitochondrial substrate/solute carrier; iprscan;InterPro:IPR018108 : Mitochondrial substrate/solute carrier;Pfa…
codon start: 1
product: ADP/ATP carrier protein, putative
translation: MEIYYLKKKKKISYKGLFITTFLTHGGANIISKFVVSPFERIVIIRQIQPVFFKNILIQPNFTYSNIIKSIYKNQGLTSFWWGYNASIFNFLSFSFLRLLFHDQIKYNISEQIKDKEYLKKNYFLTTFFLLYTSSSLSSAVSYPLDTIHNCMALNHENLKNKKLYKRGICLFIYDQLLKKRIKNLYAGYSLCLLNFIPYLAITIKLNELFTKYFTEINFDKKNYSFQNDKKNNNNLNEEYKELFKKTPNFLSHIILGVLTGYIAQFATYPLETLRRKYQYRTMYEQNFIKLINHNNKLNTIKHKTFVNKITNMYKGFTMHSLKLIPEYLIFSCFFYYVKNNMPI
SIO_010081: PCHAS_1203800
subclass of: SO_0000673
so part of: PCHAS_1203800
location: join(142474..142681,142830..143162,143372..143865)
location: region:142474-143865:1
so has part: feature:142474-142681:1:exon
so has part: feature:142830-143162:1:exon
so has part: feature:143372-143865:1:exon

XP_736005.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142474-142681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142830-143162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143372-143865:1:exon

PCHAS_1203900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1203900
old locus tag: PCHAS_120390
so part of: sequence
location: <144434..>145381
location: region:144434-145381:1
so has part: feature:144434-145381:1:exon
subclass of: SO_0000010

3497101
type: Gene
SIO_000068: ncbigene

position:144434:1
position: 144434
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:145381:1
position: 145381
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144434-145381:1:exon

PCHAS_1203900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1203900
old locus tag: PCHAS_120390
product: conserved protein, unknown function
transcript id: XM_738897.1
SIO_010081: PCHAS_1203900
subclass of: SO_0000673
so part of: PCHAS_1203900
location: <144434..>145381
location: region:144434-145381:1
so has part: feature:144434-145381:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144434-145381:1:exon

PCHAS_1203900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1203900
old locus tag: PCHAS_120390
note: term=annotation;date=20180518;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk; ;query 298-298;GPI_cleavage_site_score=0.24939999
codon start: 1
product: conserved protein, unknown function
translation: MNSYNVKTFFISNLKHNFIKIQKQYGGASLLTKIGQSFNQENFKNMKTKLSNYQKGSLNVLSNDNNIFKNLIDIFKNTNIKDKLKLGDDTEKKEKEFFDYYVKCLMKYEGIFTYRKFKSFLKDLCDYFKIYSITYKYKKKMNPQLEKLKKQYEVLNSFLPHELDSDDYKIFHSESKKYLAQSANVDLDFINELLLFHDSLKTDRTWFYRRIVLKRKLPESFEEREIEAPYDRPVMKTFNYGVKESSLEYEHYMNQNGRKLKFKKWISKKHPWFRKNTSGKNRWATRPYTKKFPYLYYSSIPKHMYLSKNKPKIKR
SIO_010081: PCHAS_1203900
subclass of: SO_0000673
so part of: PCHAS_1203900
location: 144434..145381
location: region:144434-145381:1
so has part: feature:144434-145381:1:exon

XP_743990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144434-145381:1:exon

PCHAS_1204000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1204000
old locus tag: PCHAS_120400
so part of: sequence
location: complement(<145553..>147643)
location: region:145553-147643:-1
so has part: feature:145553-147643:-1:exon
subclass of: SO_0000010

3497100
type: Gene
SIO_000068: ncbigene

position:145553:-1
position: 145553
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:147643:-1
position: 147643
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145553-147643:-1:exon

PCHAS_1204000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1204000
old locus tag: PCHAS_120400
product: methionine--tRNA ligase, putative
transcript id: XM_738896.2
SIO_010081: PCHAS_1204000
subclass of: SO_0000673
so part of: PCHAS_1204000
location: complement(<145553..>147643)
location: region:145553-147643:-1
so has part: feature:145553-147643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145553-147643:-1:exon

PCHAS_1204000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1204000
old locus tag: PCHAS_120400
note: term=annotation;date=20120718;qualifier=removed_pro duct=methionine-tRNA ligase, putative;qualifier=added_product=methionine--trna ligase, putative;qualifier=added_ec_number=6.1.1.10;curatorName=uc b@sanger.ac.uk; ;query 674-674;GPI_cleavage_site_score=0.344; pfam_scan;Pfam:PF09334.7; E()=6.9E-22;score=77.6;query 441-557;description=tRNA-synt_1g; pfam_scan;Pfam:PF09334.7; E()=4.7E-48;score=163.8;query 139-386;description=tRNA-synt_1g; iprscan;InterPro:IPR033911 : Methioninyl-tRNA synthetase core domain;PRINTS:PR01041; score=6.6E-10;query 545-556;description=Methioninyl-tRNA synthetase core domain; iprscan;InterPro:IPR033911 : Methioninyl-tRNA synthetase core domain;PRINTS:PR01041; score=6.6E-10;query 454-469;description=Methioninyl-tRNA synthetase core domain; iprscan;InterPro:IPR033911 : Methioninyl-tRNA synthetase core domain;PRINTS:PR01041; score=6.6E-10;query 140-153;description=Methioninyl-tRNA synthetase core domain; iprscan;InterPro:IPR033911 : Methioninyl-tRNA synthetase core domain;PRINTS:PR01041; score=6.6E-10;query 224-235;description=Methioninyl-tRNA synthetase core domain; iprscan;InterPro:IPR009080 : Aminoacyl-tRNA synthetase, class 1a, anticodon-binding;Superfamily:SSF47323; score=2.07E-21;query 546-671;description=Aminoacyl-tRNA synthetase, class Ia, anticodon-binding; iprscan;Superfamily:SSF52374; score=3.67E-77;query 136-541;description=null; iprscan;InterPro:IPR015413 : Aminoacyl-tRNA synthetase, class I (M);Pfam:PF09334; score=7.1E-22;query 441-557;description=Methionyl/Leucyl tRNA synthetase; iprscan;InterPro:IPR015413 : Aminoacyl-tRNA synthetase, class I (M);Pfam:PF09334; score=4.8E-48;query 139-386;description=Methionyl/Leucyl tRNA synthetase
codon start: 1
product: methionine--tRNA ligase, putative
translation: MKFFFFFFEIYLIIKICNGLNKNSYIGSLNFENIKNAFPSFFSKITREKYNLKNNNFLKTHLKKKNIYQFLYGGDKQYVLGRNPFVNIEKKKKKNENIKKLSNSVENAELANTNECYSKNVKEVFDYVKQNDETKKGLVITTPIYYGNDKPHIGHAYCNVLVDVIYRFEKIKDNENKKKIIFFSGMDEHGLKIDSKTKKLNMDKTNYLNNISEYYKKMNKMLSVDINLFYRTSNVFHKTFVQHVWKYLLSKGYIYKDVYKGYYSISEERYLSDREVEKMKSEENNTAANRIIYIEEENSYFFDVNKFKDFLINFYKTNESIIFPSYLKKEIEYHIENDFKNVCISRYNTEWGIKIPGEEKGTIYVWFEALLSYISSILYVIKKYESSKISSTLPQSKTQEEDNIVCSYEDVLSLVNSCTSVDSRENDAYLENPIMDDKICSRKLFEKLWNPYIQVIGKDILKFHGILYICLLNSLGIKIPEHILCHGLIKIENIKISKSLNNIVSPFTLLEKYDKDVIRLYFIGSGNIYEDKNFKESNLETFELFLRNSVGNLLYRTVSLCIENNYKIIKKHYLFNFTILNEFKSDKTNLIKLFENMEYPLLLEKLMILVKKINKYFVHNEPWNKLNDSKNFNLIIYETFECIKFFSIFMYPFIPNISLSILKNIGFEEIDHESVSIDMLNEETDRFVLKNLIKII
SIO_010081: PCHAS_1204000
subclass of: SO_0000673
so part of: PCHAS_1204000
location: complement(145553..147643)
location: region:145553-147643:-1
so has part: feature:145553-147643:-1:exon

XP_743989.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145553-147643:-1:exon

PCHAS_1204100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1204100
old locus tag: PCHAS_120410
so part of: sequence
location: <148449..>151394
location: region:148449-151394:1
so has part: feature:148449-151394:1:exon
subclass of: SO_0000010

3485975
type: Gene
SIO_000068: ncbigene

position:148449:1
position: 148449
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:151394:1
position: 151394
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148449-151394:1:exon

PCHAS_1204100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1204100
old locus tag: PCHAS_120410
product: U3 small nucleolar RNA-associated protein 25, putative
transcript id: XM_727933.2
SIO_010081: PCHAS_1204100
subclass of: SO_0000673
so part of: PCHAS_1204100
location: <148449..>151394
location: region:148449-151394:1
so has part: feature:148449-151394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148449-151394:1:exon

PCHAS_1204100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1204100
old locus tag: PCHAS_120410
note: term=annotation;date=20110524;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk; term=annotation;date=20150824;qualifier=removed_product=co nserved protein, unknown function;qualifier=added_product=u3 small nucleolar rna-associated protein 25, putative;qualifier=added_gene_name=utp25;qualifier=added_l iterature=pmid:20884785;qualifier=added_GO:0032040;qualifi er=added_GO:0005730;qualifier=added_GO:0019843;qualifier=a dded_GO:0042274;curatorName=ucb@sanger.ac.uk; ;query 944-944;GPI_cleavage_site_score=1.2470001; pfam_scan;Pfam:PF06862.8; E()=1.8E-58;score=198.3;query 693-973;description=UTP25; pfam_scan;Pfam:PF06862.8; E()=6.7E-40;score=137.1;query 458-652;description=UTP25; iprscan;InterPro:IPR010678 : Protein of unknown function DUF1253;Pfam:PF06862; score=6.9E-40;query 458-652;description=Digestive organ expansion factor, predicted; iprscan;InterPro:IPR010678 : Protein of unknown function DUF1253;Pfam:PF06862; score=1.9E-58;query 693-973;description=Digestive organ expansion factor, predicted; iprscan;InterPro:IPR027417 : P-loop containing nucleoside triphosphate hydrolase;Superfamily:SSF52540; score=4.53E-6;query 836-929;description=P-loop containing nucleoside triphosphate hydrolase
codon start: 1
product: U3 small nucleolar RNA-associated protein 25, putative
translation: MRGSKKSKRKITSLNELYELEYVKREKKRKLKELKSKINKKNELTTQEDDNKKNLKNNNNEENEKKKKIDKTLLEKYEKLKELENTPTNNQNNETKNGNNKSYKTFLQILQKKNKKIYNQTFQAKSHHTLSPSKQPEQFRNNDNNQNEHNKNCISKNNKDEEKDVVDSETNKNEISTFQNKDEIYMKILINNIKNQNTNFLNDKENDNEMASQNDGHTLEHKDIYADYANKSYKIVENKMDYYFTFCQNIDDNFIKKFLQIKLKKGKHKNDHTELNKNQTIENMYVTSNLFLQTNIFKKKTHQESENQNESDHSDQIDEAEIQNENIDEKTSNLFFNNIKIKPYFFSNYVEKNDITYFLMTILKTHPKSILDDNNYYNIYEPILNKLKIYLSEFKYPLAFFNNQIYEYMQNYYNVDIKKVTKQESDEEYEIDNIQKKKKIKKKTFRDVSAILERDELKAYFHYINSYVDVFYSNQNILNFHFIRLLNSIHCLNHLKKRRKRKLYIKKKIEKLEKTQQVEKENIQLKDDLCDESFSKPKILILCAFRYICKEYVDLLINMLSLIEVKNKNRFINEYDITPEEKKNLKNMYIKKKQSFDYINLYRGNSDDCFRLGIKLFENEKKIQLYTPFYDSDILICSPLGLEIIIKEYKETDDKTNNIYNEDDNYSDDYELNGADNSAKKTKKKKKINTNNNKKKKLYEYDFLSSIEVLVIDQIDIILMQNILTLKNVLNFINKPLLKWRNANINRIAKYAVDGYIKNYRQTIITSSIIDTNFISLIQLSNNYRSFLKLFIKNDDDTILLSIRNMFKINQYFKKIECDDILKIEECIIDFFSTNVIEILTNIKQLIICIPTYIEYIRLYEILKKNDISFKGVNEYTTEKKRIKIQKLFKFEKVNILLVTSRLIYYERCTFKNANHVIFFSPPKFQFMYFELIKNITTNTPNASSMCYYTKYHTYELERIVGQKRAIHLMREKPGKITLFK
SIO_010081: PCHAS_1204100
subclass of: SO_0000673
so part of: PCHAS_1204100
location: 148449..151394
location: region:148449-151394:1
so has part: feature:148449-151394:1:exon

XP_733026.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148449-151394:1:exon

PCHAS_1204150
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1204150
old locus tag: PCHAS_120415
so part of: sequence
location: complement(<151528..>151942)
location: region:151528-151942:-1
so has part: feature:151528-151942:-1:exon
subclass of: SO_0000010

27794944
type: Gene
SIO_000068: ncbigene

position:151528:-1
position: 151528
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:151942:-1
position: 151942
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151528-151942:-1:exon

PCHAS_1204150
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1204150
old locus tag: PCHAS_120415
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798791.1
SIO_010081: PCHAS_1204150
subclass of: SO_0000673
so part of: PCHAS_1204150
location: complement(join(<151528..151576,151687..151754,151874..>151942))
location: region:151528-151942:-1
so has part: feature:151874-151942:-1:exon
so has part: feature:151687-151754:-1:exon
so has part: feature:151528-151576:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151874-151942:-1:exon

position:151874:-1
position: 151874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:151687-151754:-1:exon

position:151687:-1
position: 151687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151754:-1
position: 151754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:151528-151576:-1:exon

position:151576:-1
position: 151576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1204150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1204150
old locus tag: PCHAS_120415
note: term=structural;date=20110408;qualifier=method_new= new gene model added based on homology;curatorName=ucb@sanger.ac.uk
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MSISSSGNANLLDNKAQLAKAKKVMSQLEDLEIECFGEFLKINILKKGINIDIYKNIIKDL
SIO_010081: PCHAS_1204150
subclass of: SO_0000673
so part of: PCHAS_1204150
location: complement(join(151528..151576,151687..151754,151874..151942))
location: region:151528-151942:-1
so has part: feature:151874-151942:-1:exon
so has part: feature:151687-151754:-1:exon
so has part: feature:151528-151576:-1:exon

XP_016654160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151874-151942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151687-151754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151528-151576:-1:exon

PCHAS_1204200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1204200
old locus tag: PCHAS_120420
so part of: sequence
location: complement(<152378..>153353)
location: region:152378-153353:-1
so has part: feature:152378-153353:-1:exon
subclass of: SO_0000010

3491211
type: Gene
SIO_000068: ncbigene

position:152378:-1
position: 152378
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:153353:-1
position: 153353
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152378-153353:-1:exon

PCHAS_1204200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1204200
old locus tag: PCHAS_120420
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798792.1
SIO_010081: PCHAS_1204200
subclass of: SO_0000673
so part of: PCHAS_1204200
location: complement(join(<152378..153227,153325..>153353))
location: region:152378-153353:-1
so has part: feature:153325-153353:-1:exon
so has part: feature:152378-153227:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153325-153353:-1:exon

position:153325:-1
position: 153325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:152378-153227:-1:exon

position:153227:-1
position: 153227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1204200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1204200
old locus tag: PCHAS_120420
note: query 277-277;GPI_cleavage_site_score=0.64089996
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MERSADFQKKFERGISSIADILFKNIIFHLYYSFDKIKEYDGTNNPRKKGEDVIKLKAYEKSKKNIEKVINLGLTIIKTIKGNDSFIMEHVLENYNAIKINSKNKEEKKKIITFDDEHLNYRLNNNKFLAELKDKISDMPNEYIISNEETLHIGTKKVDSYLNKISIIDKYIDKNKAYSQEELSNELNNFFNNFYLQNFQINISQDIFKANDNENQPIHDDGTVTSKLFSEYFNNCKKDNKLSILIKEINLNSLKIFKNILYKNIKFIRVFNAKNWDSGKINSLQMSKLFDM
SIO_010081: PCHAS_1204200
subclass of: SO_0000673
so part of: PCHAS_1204200
location: complement(join(152378..153227,153325..153353))
location: region:152378-153353:-1
so has part: feature:153325-153353:-1:exon
so has part: feature:152378-153227:-1:exon

XP_016654161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153325-153353:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152378-153227:-1:exon

PCHAS_1204300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1204300
old locus tag: PCHAS_120430
so part of: sequence
location: complement(<153853..>154844)
location: region:153853-154844:-1
so has part: feature:153853-154844:-1:exon
subclass of: SO_0000010

3497079
type: Gene
SIO_000068: ncbigene

position:153853:-1
position: 153853
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:154844:-1
position: 154844
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153853-154844:-1:exon

PCHAS_1204300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1204300
old locus tag: PCHAS_120430
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798793.1
SIO_010081: PCHAS_1204300
subclass of: SO_0000673
so part of: PCHAS_1204300
location: complement(join(<153853..154691,154835..>154844))
location: region:153853-154844:-1
so has part: feature:154835-154844:-1:exon
so has part: feature:153853-154691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:154835-154844:-1:exon

position:154835:-1
position: 154835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153853-154691:-1:exon

position:154691:-1
position: 154691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1204300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1204300
old locus tag: PCHAS_120430
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MALTSDQFKKKFLTFEEGKELVASTLKTGRGIEMLNKMISKKRLLKIFMDRLKIINKFKKNDEHKIIYYSLSFIERKIKSKFLESCSIFFGTPSSDKFLEKKEKNESDNKKYDSSHKVDNKNFEMIYKLLRLEIILKAYANKLLHLFFFKCNHINNNNFLKKKLKTCVNDNLMSPRFDFTLRKFHTYFKYPNIKSTTKSKINNFDKVYNKILCSSYDDYNMKKKEKNKNTFSSKSFALLPLIPYYYNDLPSIKMANDYMNRTWRKTNIKISQNKKKIYTHYK
SIO_010081: PCHAS_1204300
subclass of: SO_0000673
so part of: PCHAS_1204300
location: complement(join(153853..154691,154835..154844))
location: region:153853-154844:-1
so has part: feature:154835-154844:-1:exon
so has part: feature:153853-154691:-1:exon

XP_016654162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154835-154844:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:153853-154691:-1:exon

PCHAS_1204400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1204400
old locus tag: PCHAS_120440
so part of: sequence
location: complement(<155803..>159582)
location: region:155803-159582:-1
so has part: feature:155803-159582:-1:exon
subclass of: SO_0000010

3497078
type: Gene
SIO_000068: ncbigene

position:155803:-1
position: 155803
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:159582:-1
position: 159582
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155803-159582:-1:exon

PCHAS_1204400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1204400
old locus tag: PCHAS_120440
product: regulator of nonsense transcripts 1, putative
transcript id: XM_016798794.1
SIO_010081: PCHAS_1204400
subclass of: SO_0000673
so part of: PCHAS_1204400
location: complement(<155803..>159582)
location: region:155803-159582:-1
so has part: feature:155803-159582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155803-159582:-1:exon

PCHAS_1204400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1204400
old locus tag: PCHAS_120440
note: term=annotation;date=20151012;qualifier=added_gene_ name=UPF1;qualifier=removed_product=regulator of nonsense transcripts, putative;qualifier=added_product=regulator of nonsense transcripts 1, putative;qualifier=added_GO:0004004;curatorName=ucb@sanger .ac.uk; pfam_scan;Pfam:PF13087.2; E()=5.0E-59;score=199.1;query 839-1033;description=AAA_12; pfam_scan;Pfam:PF09416.6; E()=3.4E-49;score=166.6;query 222-397;description=UPF1_Zn_bind; pfam_scan;Pfam:PF13086.2; E()=2.0E-18;score=67.0;query 626-712;description=AAA_11; pfam_scan;Pfam:PF13086.2; E()=2.3E-26;score=93.0;query 726-829;description=AAA_11; iprscan;Pfam:PF13087; score=9.0E-59;query 839-1032;description=null; iprscan;Pfam:PF13086; score=1.8E-42;query 626-829;description=null; iprscan;InterPro:IPR027417 : P-loop containing nucleoside triphosphate hydrolase;Superfamily:SSF52540; score=2.05E-68;query 621-1047;description=P-loop containing nucleoside triphosphate hydrolase; iprscan;InterPro:IPR018999 : RNA helicase UPF1, UPF2-interacting domain;Pfam:PF09416; score=4.0E-49;query 222-397;description=RNA helicase UPF1, UPF2-interacting domain
codon start: 1
product: regulator of nonsense transcripts 1, putative
translation: MNRARNCSQIDVDTFYDLYNIVDTKRDKINHKSKHNEESNFNDLFEYELKNEMKGMKQSSHRKGIGEKIKNTKYVNQTNFRKNNSSNNYLCELSEKKTSNFDIDENRIHKLVPFSDACSDVESYAMSWNESHLRGYTESSADDMNRQENDKDGYKKVSKENAYLKNEKIKKNLNKKKGKRKDDNCYSSQIVQEYGEKQNKGVANNYGDSNDDFEEDELKYYRCRYCEIDSIDSVVQCNTCERWFCNGSYGTCGSHIVTHLVRSKHKEIKLHKNSLLGETILECYNCGCRNVFLLGFLPTLEEGVVIIICRDPCLAYYISLNKKDDDNVMKRKVSSQDEESEGETKIKECNLEKWQPIIEDRCFLEWLVNIPTKEEAEKKGKLITSVNVNKLEEFWKNKKDVYINELDLKILDDEPKKVKLKYTDAIDYKLTFSPLIQLESNYDKSIKEGHKQTNVRIRWDVGLNKKRYAYFVYIKEESELRIVVGDELKISYAYPNGNIWSCEGHISRLNNNEEIALELKVLYNIDGPWNDNINTGFVVEFVWKSTAYDRMQLALNEFAFNSFSLSGHLYHKLLGHDIIDEPINYNKKEFSLNSDSKKYGYNKKSNDNFSTSYKIVNYSAPNLAPLNHSQIDAIQKSLNSPLSLIQGPPGTGKTLTCATLVYHMHKTKMGGKVLVTAPSNVAVDQLSVRIHRTGLKVVRLCARSRESVSSIADYLYLHNQVKLLKTDVGEELNKLLELKEEVGELSQKDENRLKKLILHAEYKILIEADVICTTCVGAMDKRLKKFRFNQVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLGPIIVCKKAASAGLGKSLFERLVMLGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKEREYPLKNFPWPNSKYPMFFYNSNGLEEMSASGTSYLNRSEAQNMEILVRALLNSGLKATQIGVITPYEGQRAYITSLFQKNISYQHCLDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVLSRHHFISKEKLNSNETITNVNSVWINLLNQFKKKNLIVEGCLSNLKSITINIPAPIKQPSKYINFDYFHDLKDINSKIYDKEINRYTKDYGNSKDNYKFRYQRANSLLSQNMSNSSICNESIIDQDIYNFINERKGKNRYSLNSYINNFSQLSQSNGSMTDEIPNLRGISSAESVEDADFNFSQISSNFNETNFDSKIDSKNGDIFPYLFYQDSDNNRHNKGIH
SIO_010081: PCHAS_1204400
subclass of: SO_0000673
so part of: PCHAS_1204400
location: complement(155803..159582)
location: region:155803-159582:-1
so has part: feature:155803-159582:-1:exon

XP_016654163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155803-159582:-1:exon

PCHAS_1204500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1204500
old locus tag: PCHAS_120450
so part of: sequence
location: complement(<161309..>163123)
location: region:161309-163123:-1
so has part: feature:161309-163123:-1:exon
subclass of: SO_0000010

3490831
type: Gene
SIO_000068: ncbigene

position:161309:-1
position: 161309
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:163123:-1
position: 163123
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161309-163123:-1:exon

PCHAS_1204500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1204500
old locus tag: PCHAS_120450
product: DnaJ protein, putative
transcript id: XM_732710.2
SIO_010081: PCHAS_1204500
subclass of: SO_0000673
so part of: PCHAS_1204500
location: complement(<161309..>163123)
location: region:161309-163123:-1
so has part: feature:161309-163123:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161309-163123:-1:exon

PCHAS_1204500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1204500
old locus tag: PCHAS_120450
note: pfam_scan;Pfam:PF00226.27; E()=7.6E-20;score=70.8;query 14-80;description=DnaJ; pfam_scan;Pfam:PF12171.4; E()=1.1E-5;score=25.4;query 367-391;description=zf-C2H2_jaz; iprscan;InterPro:IPR036869 : Chaperone J-domain superfamily;Superfamily:SSF46565; score=2.88E-23;query 10-84;description=Chaperone J-domain superfamily; iprscan;InterPro:IPR018253 : DnaJ domain, conserved site;Prosite:PS00636; score=1.0;query 60-79;description=DnaJ domain, conserved site; iprscan;Pfam:PF12874; score=1.3E-5;query 367-391;description=null; iprscan;InterPro:IPR013087 : Zinc finger C2H2-type;SMART:SM00355; score=0.22;query 367-391;description=Zinc finger C2H2-type; iprscan;InterPro:IPR013087 : Zinc finger C2H2-type;Prosite:PS00028; score=1.0;query 369-391;description=Zinc finger C2H2-type; iprscan;InterPro:IPR013087 : Zinc finger C2H2-type;Prosite:PS00028; score=1.0;query 561-583;description=Zinc finger C2H2-type; iprscan;InterPro:IPR013087 : Zinc finger C2H2-type;Prosite:PS50157; score=9.868;query 559-588;description=Zinc finger C2H2-type; iprscan;InterPro:IPR013087 : Zinc finger C2H2-type;SMART:SM00355; score=0.049;query 559-583;description=Zinc finger C2H2-type; iprscan;InterPro:IPR013087 : Zinc finger C2H2-type;Prosite:PS50157; score=9.39;query 367-391;description=Zinc finger C2H2-type; iprscan;InterPro:IPR036236 : Zinc finger C2H2 superfamily;Superfamily:SSF57667; score=2.57E-7;query 365-397;description=Zinc finger C2H2 superfamily; iprscan;InterPro:IPR001623 : Heat shock protein DnaJ, N-terminal;SMART:SM00271; score=8.9E-22;query 12-75;description=DnaJ domain; iprscan;InterPro:IPR001623 : Heat shock protein DnaJ, N-terminal;PRINTS:PR00625; score=4.4E-13;query 15-33;description=DnaJ domain; iprscan;InterPro:IPR001623 : Heat shock protein DnaJ, N-terminal;PRINTS:PR00625; score=4.4E-13;query 55-75;description=DnaJ domain; iprscan;InterPro:IPR001623 : Heat shock protein DnaJ, N-terminal;Pfam:PF00226; score=4.4E-20;query 14-80;description=DnaJ domain; iprscan;InterPro:IPR001623 : Heat sho…
codon start: 1
product: DnaJ protein, putative
translation: MEEKERDIEKCQCYYEILGVEKNATIEDIKKNYKKLILNYHPDKNSNRSEEELKRYTHIFRKIQESYECLIDERRRKWYDVNRNKIIRGREEEEEEREGNQTNSYSNYKVNINIWGYFNNNCFNGYDDNCEKSFYNVYRKLFDDIIKEENEELNKINKINKNNKENPISAPSFGNSQTCGKSIDEFYEYWSNFSTVKKFDFFNEYLKSYEFENRHTRRNLKKENEKKSIKERKNYNENIRSLVQHLKQYDTRYLNRVVQIVEEKRKKQEEKENIKKQQLLERKLLFEQTKKKWEEEQAAHCEEEEDLSDHNKNKREFSLESSHNYYESSGNEHSKRDSNLKRNDYINDDEHQNDSNSDHSIKQNIIYRCEVCKKNFKTMKHYNSHEKSKKHITNFLKSTRNYNLDDIFGDVGNGEENDVENDDEIKVPKKKKKKKKKNPPTLSFNNIENSGNSSSENIMKNDDYLSWCTNDKKKYKYKFLDEKDGVKEEISSSTSDGNKKKKKKKKKKKNPEPIEKNKEQAKSFEKTDHVTNFEDMDKDIGKCKDTPTNVTTKDNSKNLKCQICNQSFDSRNKLFDHIKAEGHMANKIIVPPSKAKKKNKKKGE
SIO_010081: PCHAS_1204500
subclass of: SO_0000673
so part of: PCHAS_1204500
location: complement(161309..163123)
location: region:161309-163123:-1
so has part: feature:161309-163123:-1:exon

XP_737803.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161309-163123:-1:exon

PCHAS_1204600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1204600
old locus tag: PCHAS_120460
so part of: sequence
location: complement(<164322..>166616)
location: region:164322-166616:-1
so has part: feature:164322-166616:-1:exon
subclass of: SO_0000010

3499066
type: Gene
SIO_000068: ncbigene

position:164322:-1
position: 164322
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:166616:-1
position: 166616
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164322-166616:-1:exon

PCHAS_1204600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1204600
old locus tag: PCHAS_120460
product: peptidase, putative
transcript id: XM_740846.2
SIO_010081: PCHAS_1204600
subclass of: SO_0000673
so part of: PCHAS_1204600
location: complement(join(<164322..165909,166105..>166616))
location: region:164322-166616:-1
so has part: feature:166105-166616:-1:exon
so has part: feature:164322-165909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:166105-166616:-1:exon

position:166105:-1
position: 166105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:164322-165909:-1:exon

position:165909:-1
position: 165909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1204600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1204600
old locus tag: PCHAS_120460
note: term=annotation;date=20160707;qualifier=removed_pro duct=DnaJ protein, putative;qualifier=added_product=peptidase, putative;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF01432.16; E()=3.6E-21;score=75.8;query 216-640;description=Peptidase_M3; iprscan;InterPro:IPR001567 : Peptidase M3A and M3B, thimet/oligopeptidase F;Pfam:PF01432; score=3.7E-21;query 216-640;description=Peptidase M3A/M3B catalytic domain; iprscan;Superfamily:SSF55486; score=2.93E-49;query 61-643;description=null
codon start: 1
product: peptidase, putative
translation: MVNFNNFINKCICVFFSNIPKTFYGNEKNKLYKEITDNVKNSKIINFPIDKDSVNFFFISSEINKLLNIKNKIINDNIQKNIIVEKCFNLYYLLATHTKLKKETFYKKRILECIEENISKYIYNNKGQKIDEKNIPYSIRIRNNQSVGNLFNELKEDCSKYLKKINNVKVRHLIIDKNEIKIDEGWKKSHEYTFNKNKLKIPISKYNYEYILNGLEESESRKKVLELLNSPYKNLNLNNDVINILKKRYDLANKLGYKNWGHYSISQFTMEKNNYENIEKFLNIIKEKVEKDYDKIIYDILKISNFSKFSNKNNKKNYWENNTHKLAIYDWSFYYNKIMNKSDEYLINSYFPQNIVLKNFMEIVSRIYNFFYEEIKDEEIKKKWPKDSIIYKIDRHQSNVKKGTTLNYENKNVFNNSFLGYIYIIPYMDINFKDYFRVPSMSSLPNTCLISPGHVLIDYKFIRTVPIKNKLFSSSEILTLFHEFGHAYHLLLLSNNLSLSNLFNIPLDYAEFFSHINEHIANNYDIISKLSNKIGNNLKISENLFKTIKFDCSRLGNIYSQSIIDYVIHDLNPHLFFSNTMNSSSENKIENEEDNLCNFYETIEKYFPYKFCSSYSIHSTSFPYHFSSYYSGAVLSYLFAETRVLLNVSTDQINLKKNNTLTSFQKKFYDIILNDFKTDNYPSVINSLINSKKSEKFFK
SIO_010081: PCHAS_1204600
subclass of: SO_0000673
so part of: PCHAS_1204600
location: complement(join(164322..165909,166105..166616))
location: region:164322-166616:-1
so has part: feature:166105-166616:-1:exon
so has part: feature:164322-165909:-1:exon

XP_745939.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166105-166616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164322-165909:-1:exon

PCHAS_1204700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1204700
old locus tag: PCHAS_120470
so part of: sequence
location: <168780..>169562
location: region:168780-169562:1
so has part: feature:168780-169562:1:exon
subclass of: SO_0000010

3499067
type: Gene
SIO_000068: ncbigene

position:168780:1
position: 168780
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:169562:1
position: 169562
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168780-169562:1:exon

PCHAS_1204700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1204700
old locus tag: PCHAS_120470
product: conserved Plasmodium protein, unknown function
transcript id: XM_740847.1
SIO_010081: PCHAS_1204700
subclass of: SO_0000673
so part of: PCHAS_1204700
location: join(<168780..169326,169423..>169562)
location: region:168780-169562:1
so has part: feature:168780-169326:1:exon
so has part: feature:169423-169562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:168780-169326:1:exon

position:169326:1
position: 169326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:169423-169562:1:exon

position:169423:1
position: 169423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1204700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1204700
old locus tag: PCHAS_120470
note: tmhmm; query 1-229; ;query 67-78; ;query 139-158; ;query 44-66; ;query 79-101; ;query 116-138; ;query 159-181; ;query 1-43; ;query 102-115; ;query 182-228
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MPDNLELLHFYNIYNDRRNKWKIGINKLNFNIENYKNIKTKIFLYVLWSILLFIYFFELLLNLLFVIYIQNINIIVKTIFIFSIFEIITVILLTSQSIYGYSYDSSIILQKSSQSFFILSIWCFFKLLFYTILTILLSVFSNSNITLNTQFIYFSNKTLYFNSLMKIIITITAVKFVLTFFTGQKINYVFSCIRTSTILKSKIRKDLEKKSFLFEDQTYGTFTMDFNA
SIO_010081: PCHAS_1204700
subclass of: SO_0000673
so part of: PCHAS_1204700
location: join(168780..169326,169423..169562)
location: region:168780-169562:1
so has part: feature:168780-169326:1:exon
so has part: feature:169423-169562:1:exon

XP_745940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168780-169326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169423-169562:1:exon

PCHAS_1204800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1204800
old locus tag: PCHAS_120480
so part of: sequence
location: <170469..>172184
location: region:170469-172184:1
so has part: feature:170469-172184:1:exon
subclass of: SO_0000010

3499065
type: Gene
SIO_000068: ncbigene

position:170469:1
position: 170469
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:172184:1
position: 172184
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170469-172184:1:exon

PCHAS_1204800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1204800
old locus tag: PCHAS_120480
product: conserved protein, unknown function
transcript id: XM_740845.2
SIO_010081: PCHAS_1204800
subclass of: SO_0000673
so part of: PCHAS_1204800
location: <170469..>172184
location: region:170469-172184:1
so has part: feature:170469-172184:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170469-172184:1:exon

PCHAS_1204800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1204800
old locus tag: PCHAS_120480
note: term=annotation;date=20180518;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk
codon start: 1
product: conserved protein, unknown function
translation: MKIYYFIFFLIMLGNTNSVKLRNSRHNANNGTPFRPTTQIYKNEKKSRPPKISKFNSVNRKNIETGNVIKNDKCKRRGRIKKILFLAPNKALNNDKKKFVKMILAPKGSIHEKKTKYILEDPIKTYPWEISIPFHETITKELSPYYNFLKGEWAYLDHRRDVRKPCGKIEGGLENYDGKGLKLKKGKDRQRYKKIPYYLDHGVSWRNYNFDELIQFDFETDGNQDQTFLETEEDLEYRQWGNWNYVNAKETTQLNTIWRDPVLSKDLSNLIYPWNHKIVENHIIPHGYPSPTCSIPEPRIEWELAARGFFGGYYDDPNWNRIKFYKIMKRLIIEWHEINKHTDKTKDQIRRIDEIKTELFGISSKKKYSSKQIKLINDHAYLRAKEILLDHIINPNNDSDYISYYLDRHEPIDYIGGGNYNCSSDEIQNKTVVLNMCVYPVKQQHESYSYNMSIPEMAEMYHYFMTEIRNEGRSHQIAEDPNDDRYQSYELQNERKKFPALIALYKPLWSNKKYGEEFGDALTPSQKLSSLNFSKFNAKLTLKKKNPNLDNQDPDKFNYVDDYKHVDDTYV
SIO_010081: PCHAS_1204800
subclass of: SO_0000673
so part of: PCHAS_1204800
location: 170469..172184
location: region:170469-172184:1
so has part: feature:170469-172184:1:exon

XP_745938.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170469-172184:1:exon

PCHAS_1204900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1204900
old locus tag: PCHAS_120490
so part of: sequence
location: complement(<172701..>174161)
location: region:172701-174161:-1
so has part: feature:172701-174161:-1:exon
subclass of: SO_0000010

3499068
type: Gene
SIO_000068: ncbigene

position:172701:-1
position: 172701
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:174161:-1
position: 174161
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172701-174161:-1:exon

PCHAS_1204900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1204900
old locus tag: PCHAS_120490
product: IMP1-like protein, putative
transcript id: XM_740848.2
SIO_010081: PCHAS_1204900
subclass of: SO_0000673
so part of: PCHAS_1204900
location: complement(join(<172701..172853,172959..>174161))
location: region:172701-174161:-1
so has part: feature:172959-174161:-1:exon
so has part: feature:172701-172853:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172959-174161:-1:exon

position:172959:-1
position: 172959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:172701-172853:-1:exon

position:172853:-1
position: 172853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1204900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1204900
old locus tag: PCHAS_120490
note: term=annotation;date=20161128;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=imp1-like protein, putative;qualifier=added_literature=pmid:27888074;qualifie r=added_gene_name=imp4;curatorName=ucb@sanger.ac.uk
codon start: 1
product: IMP1-like protein, putative
translation: MAKNVKTAERKGGKEEKKNTANKKRSESKDQAHNKLKNNAKENEKKGKEKNGKNKSLYVENQSTQKDTKLQARLERDPKKNAEKNAEKKVDKKTEKRYSHDIGNHGKNKNVQFRSSGMEKEKGNLLCCFCCGGKEEELGEVRVNDDELKLLDMKKRLLEEEEEKKRLKMLEEEKEKQRLKMLEDEEEEKRRLKMLEDEEEEKRRLKMLEEENEKRQIEELEDEEDDGGVSQKNKGTVLINKDMKAKLFIKKKAKLNFLGAAAAPNPPEEKNCTGPPPEVRKTTVKVKEGIYLIYSNVNYGQLEIHYSKIGIQGPGVLAYISSDVIPDFYFDQKHSKQIMFKNISTKMTSAYFNDLKPYYECYIEFIKLKKKFNGTLYFLPAFEAQPPPHLDIIFFNTREKKLNYAPIEKPVEISGDILFVIQKGLKIFTEEVEVEKLCNYVKCYGALLNLS
SIO_010081: PCHAS_1204900
subclass of: SO_0000673
so part of: PCHAS_1204900
location: complement(join(172701..172853,172959..174161))
location: region:172701-174161:-1
so has part: feature:172959-174161:-1:exon
so has part: feature:172701-172853:-1:exon

XP_745941.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172959-174161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172701-172853:-1:exon

PCHAS_1205000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1205000
old locus tag: PCHAS_120500
so part of: sequence
location: complement(<175664..>176782)
location: region:175664-176782:-1
so has part: feature:175664-176782:-1:exon
subclass of: SO_0000010

3495809
type: Gene
SIO_000068: ncbigene

position:175664:-1
position: 175664
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:176782:-1
position: 176782
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175664-176782:-1:exon

PCHAS_1205000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1205000
old locus tag: PCHAS_120500
product: CCR4-NOT transcription complex subunit 5, putative
transcript id: XM_016798795.1
SIO_010081: PCHAS_1205000
subclass of: SO_0000673
so part of: PCHAS_1205000
location: complement(join(<175664..175734,175860..176019,176157..176217,176320..176467,176665..>176782))
location: region:175664-176782:-1
so has part: feature:176665-176782:-1:exon
so has part: feature:176320-176467:-1:exon
so has part: feature:176157-176217:-1:exon
so has part: feature:175860-176019:-1:exon
so has part: feature:175664-175734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176665-176782:-1:exon

position:176665:-1
position: 176665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:176320-176467:-1:exon

position:176320:-1
position: 176320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176467:-1
position: 176467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:176157-176217:-1:exon

position:176157:-1
position: 176157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176217:-1
position: 176217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:175860-176019:-1:exon

position:175860:-1
position: 175860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176019:-1
position: 176019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:175664-175734:-1:exon

position:175734:-1
position: 175734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1205000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1205000
old locus tag: PCHAS_120500
note: term=annotation;date=20110408;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=not family protein, putative;curatorName=ucb@sanger.ac.uk; term=annotation;date=20110506;qualifier=removed_product=NO T family protein, putative;qualifier=added_product=ccr4-not transcription complex subunit 5, putative;qualifier=added_gene_name=not5;qualifier=added_li terature=pmid:17612404;curatorName=ucb@sanger.ac.uk; term=annotation;date=20190203;qualifier=added_literature=P MID:30703164;qualifier=added_GO:0030014;curatorName=ucb@sa nger.ac.uk; pfam_scan;Pfam:PF04153.14; E()=8.6E-35;score=119.5;query 50-178;description=NOT2_3_5; iprscan;InterPro:IPR007282 : NOT2/NOT3/NOT5;Pfam:PF04153; score=9.9E-35;query 50-178;description=NOT2/NOT3/NOT5
codon start: 1
product: CCR4-NOT transcription complex subunit 5, putative
translation: MDENKNEEDINHSIKANEEAKINNNSKLSKSTQMLLEKNSLKLQELIEGSYKNCIIKSDREQYRQYVPRMLWGNPCKYFPTTPLLEFQSPELFEKFNLDTLFFIFYYQPGTYQQHLASKELKKKSWKYHKKYTTWFFPYGNTIRISNDKSEKGTYFSFDYETTWSNQLKENFLFEHIYLENETSI
SIO_010081: PCHAS_1205000
subclass of: SO_0000673
so part of: PCHAS_1205000
location: complement(join(175664..175734,175860..176019,176157..176217,176320..176467,176665..176782))
location: region:175664-176782:-1
so has part: feature:176665-176782:-1:exon
so has part: feature:176320-176467:-1:exon
so has part: feature:176157-176217:-1:exon
so has part: feature:175860-176019:-1:exon
so has part: feature:175664-175734:-1:exon

XP_016654164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176665-176782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176320-176467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176157-176217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:175860-176019:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175664-175734:-1:exon

PCHAS_1205100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1205100
old locus tag: PCHAS_120510
so part of: sequence
location: complement(<178878..>179510)
location: region:178878-179510:-1
so has part: feature:178878-179510:-1:exon
subclass of: SO_0000010

3497301
type: Gene
SIO_000068: ncbigene

position:178878:-1
position: 178878
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:179510:-1
position: 179510
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178878-179510:-1:exon

PCHAS_1205100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1205100
old locus tag: PCHAS_120510
product: DNA/RNA-binding protein Alba 3, putative
transcript id: XM_739094.2
SIO_010081: PCHAS_1205100
subclass of: SO_0000673
so part of: PCHAS_1205100
location: complement(join(<178878..178987,179150..179312,179460..>179510))
location: region:178878-179510:-1
so has part: feature:179460-179510:-1:exon
so has part: feature:179150-179312:-1:exon
so has part: feature:178878-178987:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179460-179510:-1:exon

position:179460:-1
position: 179460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179150-179312:-1:exon

position:179150:-1
position: 179150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179312:-1
position: 179312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:178878-178987:-1:exon

position:178987:-1
position: 178987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1205100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1205100
old locus tag: PCHAS_120510
note: term=annotation;date=20111019;qualifier=removed_pro duct=DNA/RNA-binding protein Alba, putative;qualifier=added_product=dna/rna-binding protein alba 3, putative;qualifier=added_literature=pmid:22006844;curatorN ame=ucb@sanger.ac.uk; ;query 83-83;GPI_cleavage_site_score=0.124699995; pfam_scan;Pfam:PF01918.17; E()=3.9E-7;score=29.7;query 14-77;description=Alba; iprscan;InterPro:IPR002775 : Alba, DNA/RNA-binding protein;Pfam:PF01918; score=1.3E-7;query 14-82;description=DNA/RNA-binding protein Alba-like; iprscan;InterPro:IPR036882 : Alba-like domain superfamily;Superfamily:SSF82704; score=6.93E-18;query 12-104;description=Alba-like domain superfamily
codon start: 1
product: DNA/RNA-binding protein Alba 3, putative
translation: MTSTEDISQERAENSIQVSMTKKPTFYARIGKRMFTGNEEKNPFDEVIITGLGSATKIAIGAASIMEKEDIGQIIRIQTAYFSSDRINRRIPKITIVLKKHPDFVAN
SIO_010081: PCHAS_1205100
subclass of: SO_0000673
so part of: PCHAS_1205100
location: complement(join(178878..178987,179150..179312,179460..179510))
location: region:178878-179510:-1
so has part: feature:179460-179510:-1:exon
so has part: feature:179150-179312:-1:exon
so has part: feature:178878-178987:-1:exon

XP_744187.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179460-179510:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179150-179312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:178878-178987:-1:exon

PCHAS_1205200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1205200
old locus tag: PCHAS_120520
so part of: sequence
location: complement(<181638..>182618)
location: region:181638-182618:-1
so has part: feature:181638-182618:-1:exon
subclass of: SO_0000010

27794945
type: Gene
SIO_000068: ncbigene

position:181638:-1
position: 181638
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:182618:-1
position: 182618
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181638-182618:-1:exon

PCHAS_1205200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1205200
old locus tag: PCHAS_120520
product: conserved Plasmodium protein, unknown function
transcript id: XM_051321000.1
SIO_010081: PCHAS_1205200
subclass of: SO_0000673
so part of: PCHAS_1205200
location: complement(join(<181638..181691,181797..181823,181970..182013,182098..182164,182309..182343,182483..>182618))
location: region:181638-182618:-1
so has part: feature:182483-182618:-1:exon
so has part: feature:182309-182343:-1:exon
so has part: feature:182098-182164:-1:exon
so has part: feature:181970-182013:-1:exon
so has part: feature:181797-181823:-1:exon
so has part: feature:181638-181691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182483-182618:-1:exon

position:182483:-1
position: 182483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182309-182343:-1:exon

position:182309:-1
position: 182309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182343:-1
position: 182343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:182098-182164:-1:exon

position:182098:-1
position: 182098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182164:-1
position: 182164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:181970-182013:-1:exon

position:181970:-1
position: 181970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182013:-1
position: 182013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:181797-181823:-1:exon

position:181797:-1
position: 181797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181823:-1
position: 181823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:181638-181691:-1:exon

position:181691:-1
position: 181691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1205200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1205200
old locus tag: PCHAS_120520
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MNSYIFKILLFTLFYKIMDFTPNNQDGINFVRGKMEKDDHFNIELSYNGDNKKVKFENKPSPSELYEKYMKEIDDHKHKSVKDVMNNIMSTFDSIDQKMFLNKLSEEVNEYLKLYKGFSI
SIO_010081: PCHAS_1205200
subclass of: SO_0000673
so part of: PCHAS_1205200
location: complement(join(181638..181691,181797..181823,181970..182013,182098..182164,182309..182343,182483..182618))
location: region:181638-182618:-1
so has part: feature:182483-182618:-1:exon
so has part: feature:182309-182343:-1:exon
so has part: feature:182098-182164:-1:exon
so has part: feature:181970-182013:-1:exon
so has part: feature:181797-181823:-1:exon
so has part: feature:181638-181691:-1:exon

XP_051176955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182483-182618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182309-182343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182098-182164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181970-182013:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:181797-181823:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181638-181691:-1:exon

PCHAS_1205300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1205300
old locus tag: PCHAS_120530
so part of: sequence
location: complement(<183138..>185690)
location: region:183138-185690:-1
so has part: feature:183138-185690:-1:exon
subclass of: SO_0000010

3490963
type: Gene
SIO_000068: ncbigene

position:183138:-1
position: 183138
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:185690:-1
position: 185690
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183138-185690:-1:exon

PCHAS_1205300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1205300
old locus tag: PCHAS_120530
product: heptatricopeptide repeat-containing protein, putative
transcript id: XM_732840.2
SIO_010081: PCHAS_1205300
subclass of: SO_0000673
so part of: PCHAS_1205300
location: complement(<183138..>185690)
location: region:183138-185690:-1
so has part: feature:183138-185690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183138-185690:-1:exon

PCHAS_1205300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1205300
old locus tag: PCHAS_120530
note: term=annotation;date=20180816;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=heptatricopeptide repeat-containing protein, putative;qualifier=added_literature=pmid:30102371;curatorN ame=ucb@sanger.ac.uk; iprscan;InterPro:IPR013584 : RAP domain;Prosite:PS51286; score=12.224;query 784-841;description=RAP domain
codon start: 1
product: heptatricopeptide repeat-containing protein, putative
translation: MIKQVTKKNAAFLWCFKRYVYIPNENDIGKLSIKNLGKYSFDIVRLSKSNSELYEIFKTRVKNEITSLDGKDCYRILKSLEINNKLDDKEEFIKSLLNKISIESCKYSVKEICDICFLCSKLNLLFIPLFASLSLAFLNKINLATPENISTMCLSFCKVQIKDINLFNRISVATLNILHMFDVESLINVLISFSYLNIKKEMLLYSSVNIFVKNQNNLDINQLVKIAYIYSKFSFINSDINTMLRAKLPLHISELTNIQLADLIISLHKLYINTYDINKYFTDVNFLQLEFPIAIKVINILSQLNNINIEFKYDEIMVCVNNFLRVNTKRECLESELNKQICDDISSVGYIDENNINFQSNYIDANNFYETDTKKSEKTKIEEELYLSNVNNDDNERSRPDEEQIDPSFLEIIKRNEYPNSYYMENELLNSSLLNEENEIYNHYASKDLRTKLNTNSICYLCVDIFESLCNLLVKNSINDEYEKKFKFYLNYMCKEIIKLKDYINFTCLIKLFSSLLKIPIIWGLPFLQLNDITLFKEDFLFYIDKETNFYEELINRYFRIFHTSEDVDNHSVILCSIINLFKLKDSEWSVKGNKIVDQNEGEKYTDILEKCLHHYSSIIKKRNKYNEKKNSYIMEEYIIYNFIDCNYKNVQLWNKSLHDENGISNQDMGNYEECDNSYDNEDNINLAYALKPTIMANKILPLELFSIVQNFTKNIKINFKDGMYYIPVLEYDNYIAYIFLGPENYFYSSNEQKELSLINTLLKKDSSIVNNNEERKHDIFLINDISYNPYDIFYNEKYFAKTEILIKINYLLTKGYNIIAIPFYSWRWMNSEEKFDAINVQRNNILNVQ
SIO_010081: PCHAS_1205300
subclass of: SO_0000673
so part of: PCHAS_1205300
location: complement(183138..185690)
location: region:183138-185690:-1
so has part: feature:183138-185690:-1:exon

XP_737933.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183138-185690:-1:exon

PCHAS_1205400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1205400
old locus tag: PCHAS_120540
so part of: sequence
location: <186304..>187134
location: region:186304-187134:1
so has part: feature:186304-187134:1:exon
subclass of: SO_0000010

3496984
type: Gene
SIO_000068: ncbigene

position:186304:1
position: 186304
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:187134:1
position: 187134
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186304-187134:1:exon

PCHAS_1205400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1205400
old locus tag: PCHAS_120540
product: conserved Plasmodium protein, unknown function
transcript id: XM_738782.1
SIO_010081: PCHAS_1205400
subclass of: SO_0000673
so part of: PCHAS_1205400
location: <186304..>187134
location: region:186304-187134:1
so has part: feature:186304-187134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186304-187134:1:exon

PCHAS_1205400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1205400
old locus tag: PCHAS_120540
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MAPFKPYKFIIFDNNLKNSHFYTKIISYLNLSLLCKEIYINEKYNKIKYDNICNNKLVFFSENNLFDKLKKNVSSYGESLHSKPNLVRINENIIDTHKTIKKDLSSKFCKVQKDNERKSQNLMENGDENDQVMNGVNKLVSFLTYDDRQKDDFLKALNLNKLYNVDHINILCLNNYNSITNLFKNTNFENKRISIFCPFHIINNDDNNKYQKEIIEKIIDYIYPIVSDFLPLNYKHVYVSDLVRAIILNSELCQTNSKKDIEIFKFIDMMEIIGKS
SIO_010081: PCHAS_1205400
subclass of: SO_0000673
so part of: PCHAS_1205400
location: 186304..187134
location: region:186304-187134:1
so has part: feature:186304-187134:1:exon

XP_743875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186304-187134:1:exon

PCHAS_1205500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1205500
old locus tag: PCHAS_120550
so part of: sequence
location: complement(<187430..>188011)
location: region:187430-188011:-1
so has part: feature:187430-188011:-1:exon
subclass of: SO_0000010

3496983
type: Gene
SIO_000068: ncbigene

position:187430:-1
position: 187430
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:188011:-1
position: 188011
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187430-188011:-1:exon

PCHAS_1205500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1205500
old locus tag: PCHAS_120550
product: phosducin-like protein 3, putative
transcript id: XM_738781.1
SIO_010081: PCHAS_1205500
subclass of: SO_0000673
so part of: PCHAS_1205500
location: complement(<187430..>188011)
location: region:187430-188011:-1
so has part: feature:187430-188011:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187430-188011:-1:exon

PCHAS_1205500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1205500
old locus tag: PCHAS_120550
note: term=annotation;date=20120929;qualifier=added_gene_ name=PhLP1;qualifier=added_literature=pmid:22995278;qualif ier=removed_product=thioredoxin, putative;qualifier=added_product=phosducin-like protein, putative;curatorName=ucb@sanger.ac.uk; term=annotation;date=20190102;qualifier=removed_product=ph osducin-like protein, putative;qualifier=added_product=phosducin-like protein 3;qualifier=removed_gene_name=phlp1;qualifier=added_gene_n ame=phlp3;qualifier=added_literature=pmid:30596727;qualifi er=added_GO:0045454;qualifier=added_GO:0016491;curatorName =ucb@sanger.ac.uk; pfam_scan;Pfam:PF00085.16; E()=1.1E-8;score=34.8;query 79-162;description=Thioredoxin; iprscan;InterPro:IPR036249 : Thioredoxin-like superfamily;Superfamily:SSF52833; score=3.77E-38;query 15-185;description=Thioredoxin-like superfamily; iprscan;InterPro:IPR013766 : Thioredoxin domain;Pfam:PF00085; score=1.2E-8;query 79-162;description=Thioredoxin domain
codon start: 1
product: phosducin-like protein 3, putative
translation: MNSNITKNIEGQILEVLKDKEKEIDHEIKKYETLERRIYDDNDEELENIKNKRLQELKNRHNENRRLLSMGHGVYNEILSEKEFFDICKNSTNVCCHFYRNTTWRCEYLDSKLISLSKKFIHINFIKINAEKSPFLCDRLKIWCIPTLMLIQNGKTEHSIIGFDELGGDNFSEQALVNVLKKWKLISQTEDDG
SIO_010081: PCHAS_1205500
subclass of: SO_0000673
so part of: PCHAS_1205500
location: complement(187430..188011)
location: region:187430-188011:-1
so has part: feature:187430-188011:-1:exon

XP_743874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187430-188011:-1:exon

PCHAS_1205600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1205600
old locus tag: PCHAS_120560
so part of: sequence
location: <189136..>190183
location: region:189136-190183:1
so has part: feature:189136-190183:1:exon
subclass of: SO_0000010

3499379
type: Gene
SIO_000068: ncbigene

position:189136:1
position: 189136
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:190183:1
position: 190183
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189136-190183:1:exon

PCHAS_1205600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1205600
old locus tag: PCHAS_120560
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798797.1
SIO_010081: PCHAS_1205600
subclass of: SO_0000673
so part of: PCHAS_1205600
location: join(<189136..189243,189428..>190183)
location: region:189136-190183:1
so has part: feature:189136-189243:1:exon
so has part: feature:189428-190183:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189136-189243:1:exon

position:189243:1
position: 189243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:189428-190183:1:exon

position:189428:1
position: 189428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1205600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1205600
old locus tag: PCHAS_120560
note: pfam_scan;Pfam:PF06677.8; E()=4.6E-12;score=45.7;query 19-56;description=Auto_anti-p27; iprscan;InterPro:IPR009563 : Sjogrens syndrome scleroderma autoantigen 1;Pfam:PF06677; score=4.8E-12;query 19-56;description=Sjoegren syndrome/scleroderma autoantigen 1
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MKVERSSNISDAFSASAIIGEKLLRGWTLLNDSCHICKVTPLIKQKGKEESFCAQCNLYIKPEKSENEEQPESSTPLENKQMNKLNNENYDDRKVEDIMPNHESNNIFANSNIKYIKEIKLQNEEFNEILNKNNITKNEIKNLFEYKNYIKERCGYDVGTWLKIDNKNCDEKKECEQLDSVNSYIKETNCDKNNDVLFLQNKNHDLKFDTMNNRNISDSQINKYNQFENELLILNKTKSTLIKKLEKYSQILTNTNIKHEEFEYTNQIKNVVEILEKINNLKKNAII
SIO_010081: PCHAS_1205600
subclass of: SO_0000673
so part of: PCHAS_1205600
location: join(189136..189243,189428..190183)
location: region:189136-190183:1
so has part: feature:189136-189243:1:exon
so has part: feature:189428-190183:1:exon

XP_016654166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189136-189243:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:189428-190183:1:exon

PCHAS_1205700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1205700
old locus tag: PCHAS_120570
so part of: sequence
location: <191947..>193211
location: region:191947-193211:1
so has part: feature:191947-193211:1:exon
subclass of: SO_0000010

3499377
type: Gene
SIO_000068: ncbigene

position:191947:1
position: 191947
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:193211:1
position: 193211
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191947-193211:1:exon

PCHAS_1205700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1205700
old locus tag: PCHAS_120570
product: single-strand telomeric DNA-binding protein GBP2, putative
transcript id: XM_016798798.1
SIO_010081: PCHAS_1205700
subclass of: SO_0000673
so part of: PCHAS_1205700
location: join(<191947..191964,192310..192447,192549..192627,192745..>193211)
location: region:191947-193211:1
so has part: feature:191947-191964:1:exon
so has part: feature:192310-192447:1:exon
so has part: feature:192549-192627:1:exon
so has part: feature:192745-193211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:191947-191964:1:exon

position:191964:1
position: 191964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192310-192447:1:exon

position:192310:1
position: 192310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192447:1
position: 192447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:192549-192627:1:exon

position:192549:1
position: 192549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192627:1
position: 192627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:192745-193211:1:exon

position:192745:1
position: 192745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1205700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1205700
old locus tag: PCHAS_120570
note: term=annotation;date=20151127;qualifier=removed_pro duct=RNA-binding protein, putative;qualifier=added_product=single-strand telomeric dna-binding protein gbp2, putative;qualifier=added_gene_name=gbp2;qualifier=added_li terature=pmid:26525978;qualifier=added_GO:0000723;qualifie r=added_GO:0043047;qualifier=added_GO:0003729;curatorName= ucb@sanger.ac.uk; ;query 213-213;GPI_cleavage_site_score=0.14039999; pfam_scan;Pfam:PF00076.18; E()=2.9E-17;score=62.1;query 14-81;description=RRM_1; pfam_scan;Pfam:PF00076.18; E()=2.0E-13;score=49.8;query 157-224;description=RRM_1; iprscan;InterPro:IPR000504 : RNA recognition motif, RNP-1;SMART:SM00360; score=9.0E-21;query 13-85;description=RNA recognition motif domain; iprscan;InterPro:IPR000504 : RNA recognition motif, RNP-1;Prosite:PS50102; score=12.305;query 155-232;description=RNA recognition motif domain; iprscan;InterPro:IPR000504 : RNA recognition motif, RNP-1;Pfam:PF00076; score=2.1E-13;query 157-224;description=RNA recognition motif domain; iprscan;InterPro:IPR000504 : RNA recognition motif, RNP-1;SMART:SM00360; score=1.9E-12;query 156-228;description=RNA recognition motif domain; iprscan;InterPro:IPR000504 : RNA recognition motif, RNP-1;Pfam:PF00076; score=2.9E-17;query 14-81;description=RNA recognition motif domain; iprscan;InterPro:IPR000504 : RNA recognition motif, RNP-1;Prosite:PS50102; score=15.443;query 12-89;description=RNA recognition motif domain; iprscan;InterPro:IPR035979 : RNA-binding domain superfamily;Superfamily:SSF54928; score=6.31E-19;query 103-229;description=RNA-binding domain superfamily; iprscan;InterPro:IPR035979 : RNA-binding domain superfamily;Superfamily:SSF54928; score=4.7E-27;query 5-116;description=RNA-binding domain superfamily
codon start: 1
product: single-strand telomeric DNA-binding protein GBP2, putative
translation: MEDSQNSPAKGCRVYVGNLPWKVTWPILKAHMKKAGEVVRVDIFEDAQGRSKGCGIVEYSTCEEAQEAISSLNDSKLEDRLIFVREDREENSGSFEKRRFSNVRKDKFYDSRRRRDFDYRRDFRRDDYRRDFRRDNRKDDYRKGGDFRRGGRRNCTLVVYNLPPQSTWKELKDLFKKHGRVVRADLKNDDNSSKEVTGTVIMESDYDAKNAIDALNFCNFDGYILKVNYEHNE
SIO_010081: PCHAS_1205700
subclass of: SO_0000673
so part of: PCHAS_1205700
location: join(191947..191964,192310..192447,192549..192627,192745..193211)
location: region:191947-193211:1
so has part: feature:191947-191964:1:exon
so has part: feature:192310-192447:1:exon
so has part: feature:192549-192627:1:exon
so has part: feature:192745-193211:1:exon

XP_016654167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191947-191964:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192310-192447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192549-192627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192745-193211:1:exon

PCHAS_1205800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1205800
old locus tag: PCHAS_120580
so part of: sequence
location: <194805..>196310
location: region:194805-196310:1
so has part: feature:194805-196310:1:exon
subclass of: SO_0000010

27794946
type: Gene
SIO_000068: ncbigene

position:194805:1
position: 194805
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:196310:1
position: 196310
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194805-196310:1:exon

PCHAS_1205800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1205800
old locus tag: PCHAS_120580
product: PPPDE peptidase, putative
transcript id: XM_051321001.1
SIO_010081: PCHAS_1205800
subclass of: SO_0000673
so part of: PCHAS_1205800
location: join(<194805..194997,195096..195155,195272..195345,195467..195468,195578..195715,195799..195839,195920..196011,196111..196193,196289..>196310)
location: region:194805-196310:1
so has part: feature:194805-194997:1:exon
so has part: feature:195096-195155:1:exon
so has part: feature:195272-195345:1:exon
so has part: feature:195467-195468:1:exon
so has part: feature:195578-195715:1:exon
so has part: feature:195799-195839:1:exon
so has part: feature:195920-196011:1:exon
so has part: feature:196111-196193:1:exon
so has part: feature:196289-196310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:194805-194997:1:exon

position:194997:1
position: 194997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195096-195155:1:exon

position:195096:1
position: 195096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195155:1
position: 195155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:195272-195345:1:exon

position:195272:1
position: 195272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195345:1
position: 195345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195467-195468:1:exon

position:195467:1
position: 195467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195468:1
position: 195468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:195578-195715:1:exon

position:195578:1
position: 195578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195715:1
position: 195715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:195799-195839:1:exon

position:195799:1
position: 195799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195839:1
position: 195839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:195920-196011:1:exon

position:195920:1
position: 195920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196011:1
position: 196011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:196111-196193:1:exon

position:196111:1
position: 196111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196193:1
position: 196193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:196289-196310:1:exon

position:196289:1
position: 196289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1205800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1205800
old locus tag: PCHAS_120580
note: query 206-206;GPI_cleavage_site_score=0.516; pfam_scan;Pfam:PF05903.10; E()=3.9E-27;score=94.8;query 40-186;description=Peptidase_C97; iprscan;InterPro:IPR008580 : Protein of unknown function DUF862, eukaryotic;SMART:SM01179; score=2.9E-28;query 39-201;description=PPPDE putative peptidase domain; iprscan;InterPro:IPR008580 : Protein of unknown function DUF862, eukaryotic;Pfam:PF05903; score=2.2E-26;query 40-186;description=PPPDE putative peptidase domain
codon start: 1
product: PPPDE peptidase, putative
translation: MQSKENLGSRESISSDNNGSGPSETKQSPTRHKYEANSSMVYLNIYDLDPVSKVVNSVVKSIGTGAFHAGVEVYGFEYSFGYIPGGQTGVMKTLPRHHPYHVYRESIPMGQTPLTRSEVDLLVDVMRLQWIGNTYDILSRQDIMKKYIKKSFQYHKNCLNFADYFCNLLDVGSIPEWVMSLQKNLNWMKSNISMASSKLKELNKASGLPNVLNYVKKKYNKSDESPKKCKVVLK
SIO_010081: PCHAS_1205800
subclass of: SO_0000673
so part of: PCHAS_1205800
location: join(194805..194997,195096..195155,195272..195345,195467..195468,195578..195715,195799..195839,195920..196011,196111..196193,196289..196310)
location: region:194805-196310:1
so has part: feature:194805-194997:1:exon
so has part: feature:195096-195155:1:exon
so has part: feature:195272-195345:1:exon
so has part: feature:195467-195468:1:exon
so has part: feature:195578-195715:1:exon
so has part: feature:195799-195839:1:exon
so has part: feature:195920-196011:1:exon
so has part: feature:196111-196193:1:exon
so has part: feature:196289-196310:1:exon

XP_051176956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194805-194997:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195096-195155:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195272-195345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195467-195468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195578-195715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195799-195839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195920-196011:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:196111-196193:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:196289-196310:1:exon

PCHAS_1205900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1205900
old locus tag: PCHAS_120590
so part of: sequence
location: <197346..>199034
location: region:197346-199034:1
so has part: feature:197346-199034:1:exon
subclass of: SO_0000010

3499378
type: Gene
SIO_000068: ncbigene

position:197346:1
position: 197346
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:199034:1
position: 199034
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197346-199034:1:exon

PCHAS_1205900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1205900
old locus tag: PCHAS_120590
product: transmembrane protein 147, putative
transcript id: XM_016798800.1
SIO_010081: PCHAS_1205900
subclass of: SO_0000673
so part of: PCHAS_1205900
location: join(<197346..197422,197583..197655,197761..197817,197935..197999,198087..198187,198273..198337,198443..198567,198782..>199034)
location: region:197346-199034:1
so has part: feature:197346-197422:1:exon
so has part: feature:197583-197655:1:exon
so has part: feature:197761-197817:1:exon
so has part: feature:197935-197999:1:exon
so has part: feature:198087-198187:1:exon
so has part: feature:198273-198337:1:exon
so has part: feature:198443-198567:1:exon
so has part: feature:198782-199034:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197346-197422:1:exon

position:197422:1
position: 197422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197583-197655:1:exon

position:197583:1
position: 197583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197655:1
position: 197655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:197761-197817:1:exon

position:197761:1
position: 197761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197817:1
position: 197817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197935-197999:1:exon

position:197935:1
position: 197935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197999:1
position: 197999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:198087-198187:1:exon

position:198087:1
position: 198087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198187:1
position: 198187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:198273-198337:1:exon

position:198273:1
position: 198273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198337:1
position: 198337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:198443-198567:1:exon

position:198443:1
position: 198443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198567:1
position: 198567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:198782-199034:1:exon

position:198782:1
position: 198782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1205900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1205900
old locus tag: PCHAS_120590
note: term=annotation;date=20121114;qualifier=removed_pro duct=conserved Plasmodium membrane protein, unknown function;qualifier=added_product=conserved membrane protein, unknown function;curatorName=ucb@sanger.ac.uk; term=annotation;date=20180404;qualifier=removed_product=co nserved membrane protein, unknown function;qualifier=added_product=transmembrane protein 147, putative;qualifier=added_gene_name=tmem147;qualifier=added _GO:0016021;curatorName=ucb@sanger.ac.uk; ;query 1-34; ;query 90-101; ;query 159-169; ;query 219-271; ;query 35-57; ;query 67-89; ;query 102-124; ;query 139-158; ;query 170-192; ;query 196-218; ;query 58-66; ;query 125-138; ;query 193-195; ;query 254-254;GPI_cleavage_site_score=0.11399999; tmhmm; query 1-272; pfam_scan;Pfam:PF09767.5; E()=1.8E-36;score=125.8;query 3-160;description=DUF2053; iprscan;InterPro:IPR019164 : Protein of unknown function DUF2053, membrane;Pfam:PF09767; score=3.2E-36;query 3-160;description=Transmembrane protein 147
codon start: 1
product: transmembrane protein 147, putative
translation: MSLFHFVNCSISVFAPYYIISDGYKLSKNEGSTKLFFIAFFYYFTSQIVKLFALAFLSIGLMQSMTIFNIIFQEAGNFFDLIGLYYVLSHKQMHMFNIKSRVLSAGLSWGFCESVATNFFPFLVGGKSVDFSLKHIYRSISANTFLISNLSKTYLLYLWIKNVQNKKKVNSVNSLLIYFTFILPLMNKIILINEDIISSVIFIKLVALFFITLILFCCAKYIFNSQIEKVEVVKSNTSYSYDNDVYDNSEDNENDANKGLKKKNNKRKKSR
SIO_010081: PCHAS_1205900
subclass of: SO_0000673
so part of: PCHAS_1205900
location: join(197346..197422,197583..197655,197761..197817,197935..197999,198087..198187,198273..198337,198443..198567,198782..199034)
location: region:197346-199034:1
so has part: feature:197346-197422:1:exon
so has part: feature:197583-197655:1:exon
so has part: feature:197761-197817:1:exon
so has part: feature:197935-197999:1:exon
so has part: feature:198087-198187:1:exon
so has part: feature:198273-198337:1:exon
so has part: feature:198443-198567:1:exon
so has part: feature:198782-199034:1:exon

XP_016654169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197346-197422:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197583-197655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197761-197817:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197935-197999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:198087-198187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:198273-198337:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:198443-198567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198782-199034:1:exon

PCHAS_1206000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1206000
old locus tag: PCHAS_120600
so part of: sequence
location: complement(<199095..>199865)
location: region:199095-199865:-1
so has part: feature:199095-199865:-1:exon
subclass of: SO_0000010

27794947
type: Gene
SIO_000068: ncbigene

position:199095:-1
position: 199095
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:199865:-1
position: 199865
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199095-199865:-1:exon

PCHAS_1206000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1206000
old locus tag: PCHAS_120600
product: roadblock/LC7 domain-containing protein, putative
transcript id: XM_016798801.1
SIO_010081: PCHAS_1206000
subclass of: SO_0000673
so part of: PCHAS_1206000
location: complement(join(<199095..199220,199357..199408,199512..199578,199772..>199865))
location: region:199095-199865:-1
so has part: feature:199772-199865:-1:exon
so has part: feature:199512-199578:-1:exon
so has part: feature:199357-199408:-1:exon
so has part: feature:199095-199220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199772-199865:-1:exon

position:199772:-1
position: 199772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:199512-199578:-1:exon

position:199512:-1
position: 199512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199578:-1
position: 199578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:199357-199408:-1:exon

position:199357:-1
position: 199357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199408:-1
position: 199408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:199095-199220:-1:exon

position:199220:-1
position: 199220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1206000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1206000
old locus tag: PCHAS_120600
note: term=annotation;date=20180903;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=roadblock/lc7 domain-containing protein, putative;curatorName=ucb@sanger.ac.uk; iprscan;Superfamily:SSF103196; score=2.62E-16;query 6-105;description=null
codon start: 1
product: roadblock/LC7 domain-containing protein, putative
translation: MASSSSEISESLNTWMNNNSSIVSYVLINSDGIPLKYNEDASYEHAVKQASLFLGLLTKTKKCVKELFPQESEFNNNLRIRTSKETEYILCNYGDYSLITQQNCKDMNNQKQ
SIO_010081: PCHAS_1206000
subclass of: SO_0000673
so part of: PCHAS_1206000
location: complement(join(199095..199220,199357..199408,199512..199578,199772..199865))
location: region:199095-199865:-1
so has part: feature:199772-199865:-1:exon
so has part: feature:199512-199578:-1:exon
so has part: feature:199357-199408:-1:exon
so has part: feature:199095-199220:-1:exon

XP_016654170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199772-199865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199512-199578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199357-199408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:199095-199220:-1:exon

PCHAS_1206100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1206100
old locus tag: PCHAS_120610
so part of: sequence
location: complement(<200719..>203070)
location: region:200719-203070:-1
so has part: feature:200719-203070:-1:exon
subclass of: SO_0000010

3491420
type: Gene
SIO_000068: ncbigene

position:200719:-1
position: 200719
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:203070:-1
position: 203070
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200719-203070:-1:exon

PCHAS_1206100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1206100
old locus tag: PCHAS_120610
product: rho GTPase-activating protein, putative
transcript id: XM_016798802.1
SIO_010081: PCHAS_1206100
subclass of: SO_0000673
so part of: PCHAS_1206100
location: complement(join(<200719..201156,201267..202117,202326..202438,202680..202793,202982..>203070))
location: region:200719-203070:-1
so has part: feature:202982-203070:-1:exon
so has part: feature:202680-202793:-1:exon
so has part: feature:202326-202438:-1:exon
so has part: feature:201267-202117:-1:exon
so has part: feature:200719-201156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202982-203070:-1:exon

position:202982:-1
position: 202982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:202680-202793:-1:exon

position:202680:-1
position: 202680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202793:-1
position: 202793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:202326-202438:-1:exon

position:202326:-1
position: 202326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202438:-1
position: 202438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:201267-202117:-1:exon

position:201267:-1
position: 201267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202117:-1
position: 202117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:200719-201156:-1:exon

position:201156:-1
position: 201156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1206100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1206100
old locus tag: PCHAS_120610
note: term=annotation;date=20170411;qualifier=removed_pro duct=rhoGAP GTPase, putative;qualifier=added_product=rho gtpase-activating protein, putative;qualifier=added_GO:0005096;curatorName=ucb@sanger .ac.uk; ;query 516-516;GPI_cleavage_site_score=0.12900001; pfam_scan;Pfam:PF13716.2; E()=3.9E-51;score=172.7;query 46-182;description=CRAL_TRIO_2; pfam_scan;Pfam:PF00620.23; E()=5.9E-19;score=68.2;query 216-363;description=RhoGAP; iprscan;InterPro:IPR036865 : CRAL-TRIO lipid binding domain superfamily;Superfamily:SSF52087; score=2.35E-12;query 29-159;description=CRAL-TRIO lipid binding domain superfamily; iprscan;InterPro:IPR008936 : Rho GTPase activation protein;Superfamily:SSF48350; score=1.96E-27;query 192-387;description=Rho GTPase activation protein; iprscan;InterPro:IPR000198 : RhoGAP;Pfam:PF00620; score=6.1E-19;query 216-363;description=Rho GTPase-activating protein domain; iprscan;InterPro:IPR000198 : RhoGAP;Prosite:PS50238; score=18.071;query 196-389;description=Rho GTPase-activating protein domain; iprscan;InterPro:IPR000198 : RhoGAP;SMART:SM00324; score=2.5E-20;query 213-386;description=Rho GTPase-activating protein domain; iprscan;InterPro:IPR001251 : Cellular retinaldehyde-binding/triple function, C-terminal;SMART:SM00516; score=0.0022;query 27-174;description=CRAL-TRIO lipid binding domain; iprscan;InterPro:IPR001251 : Cellular retinaldehyde-binding/triple function, C-terminal;Pfam:PF13716; score=3.7E-51;query 46-182;description=CRAL-TRIO lipid binding domain
codon start: 1
product: rho GTPase-activating protein, putative
translation: MFDSDNEVPEEILLEYEKLLKKSQAENFDELYNTDLLKIIGKDGYGSHIVLLIPCFIISSGSDPEKTLRYVIMTLDPIVKENYVLVLCETHTNWLSNMVYAYAKQWYDTLPRIYKKNLKKLYLVHSGFFSKSLLTILTPFVSTKFWKKVEYIEKLEDLFLKLNINPTENLKHFPYIVQRNEEVLLAEGIPISPFSADLEILCQRFGKSYNGFKHIPSILVDFLTYLCKPETITTKDLFYLQTDANTIYNIIGDIEYGEPTTDFSNIPSLVCSFRLFLDTQKHGLLGKDAFTRLYHLKTVSASNKTIKENIKKLYNKLKPGTRDCILCILQFFQTVSKYSNENNMTIETLGKIFAPTFFRPKKTHFLFVECIPMANKCMQLLIENPEFLTVQDTNNADSSSDSSESTDHDTNSDKSENSESNESSDEEEDKSKSIESNKTLESEHSNSAENLNKKNVNELDSKKKPEAESEESEEESEESEDESKESDDDSKESEDESDESEEEEKKEKGNVKEQESIASETKKVVFKRENETIE
SIO_010081: PCHAS_1206100
subclass of: SO_0000673
so part of: PCHAS_1206100
location: complement(join(200719..201156,201267..202117,202326..202438,202680..202793,202982..203070))
location: region:200719-203070:-1
so has part: feature:202982-203070:-1:exon
so has part: feature:202680-202793:-1:exon
so has part: feature:202326-202438:-1:exon
so has part: feature:201267-202117:-1:exon
so has part: feature:200719-201156:-1:exon

XP_016654171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202982-203070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:202680-202793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202326-202438:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201267-202117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200719-201156:-1:exon

PCHAS_1206200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1206200
old locus tag: PCHAS_120620
so part of: sequence
location: <206137..>207996
location: region:206137-207996:1
so has part: feature:206137-207996:1:exon
subclass of: SO_0000010

3497783
type: Gene
SIO_000068: ncbigene

position:206137:1
position: 206137
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:207996:1
position: 207996
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206137-207996:1:exon

PCHAS_1206200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1206200
old locus tag: PCHAS_120620
product: RING zinc finger protein, putative
transcript id: XM_016798803.1
SIO_010081: PCHAS_1206200
subclass of: SO_0000673
so part of: PCHAS_1206200
location: join(<206137..207174,207271..>207996)
location: region:206137-207996:1
so has part: feature:206137-207174:1:exon
so has part: feature:207271-207996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206137-207174:1:exon

position:207174:1
position: 207174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:207271-207996:1:exon

position:207271:1
position: 207271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1206200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1206200
old locus tag: PCHAS_120620
note: term=annotation;date=20121114;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=ring zinc finger protein, putative;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF13639.2; E()=7.2E-10;score=38.9;query 539-582;description=zf-RING_2; iprscan;InterPro:IPR001841 : Zinc finger, RING-type;Prosite:PS50089; score=11.825;query 541-582;description=Zinc finger, RING-type; iprscan;InterPro:IPR001841 : Zinc finger, RING-type;SMART:SM00184; score=3.3E-4;query 541-581;description=Zinc finger, RING-type; iprscan;InterPro:IPR001841 : Zinc finger, RING-type;Pfam:PF13639; score=2.8E-9;query 540-582;description=Zinc finger, RING-type; iprscan;InterPro:IPR029067 : CDC48 domain 2-like;Superfamily:SSF54585; score=4.58E-15;query 355-451;description=CDC48 domain 2-like superfamily; iprscan;Superfamily:SSF57850; score=2.64E-15;query 527-585;description=null
codon start: 1
product: RING zinc finger protein, putative
translation: MERKSGKSKYMHFLPIINSQAKLNILEKNNVLEKVHILPIKKRSSNYHELYNKLNKLINEKNVLYEGVVISLKDGSESSDLKISKIPNINEKEENIKIKKTIDNDDVFGIDKVSTDESSADESKTCNMLLPLSDDEKNKSINKADSDILKNDQRENMSQLLDNNVDYVIINCIPSKGVLNHDTLIYTDGKYVDYLKKIEIIIINDKNYKKYEKTIKRKFISFKKMVLKKSNEFFNGAMSLFPLYFNFIPELCMSKSRNKVSKNEESSIEKITNHSTINEYNTKKKATKKINKIVIQNFLMNHLIPYFKNNRNKLFYPGKLFNVNNFSFLVSKIDIDISAGFIDDLTEINLRVDSYEEYNNVHIVPLYDTLPTTYNYNLFIDYIKPYIERHYLDTFSLYDTFFYRGVQFKIMGVDPIDMKCGKGRISANTSIYTQGSVKPTFFDVISTKSFNYIKSLPFEYKPYAILNILQHLDTDSLLRLFPSANINMESSTKDEQTILDHLTPLMYVYNKEKTSYDTKRILIGKNNMHTESNNNIINEQCAVCFDNFINEDKCIKLTCLHTYHWKCVKNWFRFNLTCPCCRHKLPI
SIO_010081: PCHAS_1206200
subclass of: SO_0000673
so part of: PCHAS_1206200
location: join(206137..207174,207271..207996)
location: region:206137-207996:1
so has part: feature:206137-207174:1:exon
so has part: feature:207271-207996:1:exon

XP_016654172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206137-207174:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207271-207996:1:exon

PCHAS_1206300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1206300
old locus tag: PCHAS_120630
so part of: sequence
location: <208932..>209582
location: region:208932-209582:1
so has part: feature:208932-209582:1:exon
subclass of: SO_0000010

3497785
type: Gene
SIO_000068: ncbigene

position:208932:1
position: 208932
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:209582:1
position: 209582
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208932-209582:1:exon

PCHAS_1206300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1206300
old locus tag: PCHAS_120630
product: conserved protein, unknown function
transcript id: XM_739573.1
SIO_010081: PCHAS_1206300
subclass of: SO_0000673
so part of: PCHAS_1206300
location: <208932..>209582
location: region:208932-209582:1
so has part: feature:208932-209582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208932-209582:1:exon

PCHAS_1206300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1206300
old locus tag: PCHAS_120630
note: term=annotation;date=20180518;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk
codon start: 1
product: conserved protein, unknown function
translation: MNFVKTYIYKQEYTEEGIKELEKDARSVKEIDENKILKDLPEFKRGNNFLSLSEQLELNKNNKGNTTKENQDNSNLLDIPNLNEENIDLYGNHEIFDNYSFEKIQEREKEVANEYKEAIKDYVKKKELKNITSHDDILKDDINHDFKKIKKEIINKKKNNNETKTNVKAIIKTTKKKNDNSNSDNKNGQHKELLKNNEQPQQTSFLLSGYSDNSDD
SIO_010081: PCHAS_1206300
subclass of: SO_0000673
so part of: PCHAS_1206300
location: 208932..209582
location: region:208932-209582:1
so has part: feature:208932-209582:1:exon

XP_744666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208932-209582:1:exon

PCHAS_1206400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1206400
old locus tag: PCHAS_120640
so part of: sequence
location: <210490..>210861
location: region:210490-210861:1
so has part: feature:210490-210861:1:exon
subclass of: SO_0000010

3497786
type: Gene
SIO_000068: ncbigene

position:210490:1
position: 210490
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:210861:1
position: 210861
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210490-210861:1:exon

PCHAS_1206400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1206400
old locus tag: PCHAS_120640
product: conserved Plasmodium protein, unknown function
transcript id: XM_739574.2
SIO_010081: PCHAS_1206400
subclass of: SO_0000673
so part of: PCHAS_1206400
location: <210490..>210861
location: region:210490-210861:1
so has part: feature:210490-210861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210490-210861:1:exon

PCHAS_1206400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1206400
old locus tag: PCHAS_120640
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MVLKDKKKKLQSLRYLKKKNKNANTNVNRYPERETNSKETKQNDSDENKQNYLDDDDLPSYNSNDDALIKDKDQFSYILNSDEEPYEIKEENQINISNKNKQKEFHINFVLTSVALNIPPGMV
SIO_010081: PCHAS_1206400
subclass of: SO_0000673
so part of: PCHAS_1206400
location: 210490..210861
location: region:210490-210861:1
so has part: feature:210490-210861:1:exon

XP_744667.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210490-210861:1:exon

PCHAS_1206500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1206500
old locus tag: PCHAS_120650
so part of: sequence
location: <211599..>211928
location: region:211599-211928:1
so has part: feature:211599-211928:1:exon
subclass of: SO_0000010

3497784
type: Gene
SIO_000068: ncbigene

position:211599:1
position: 211599
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:211928:1
position: 211928
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211599-211928:1:exon

PCHAS_1206500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1206500
old locus tag: PCHAS_120650
product: conserved protein, unknown function
transcript id: XM_739572.1
SIO_010081: PCHAS_1206500
subclass of: SO_0000673
so part of: PCHAS_1206500
location: <211599..>211928
location: region:211599-211928:1
so has part: feature:211599-211928:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211599-211928:1:exon

PCHAS_1206500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1206500
old locus tag: PCHAS_120650
note: term=annotation;date=20180518;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk
codon start: 1
product: conserved protein, unknown function
translation: MIKIRRINLYKKIKEKIPYGVKQSQNYKDAKKQERLSLEANRKLKESRGMLLEGKKNLFMCLRQNSDINWYRAGQILKHLEIHQRAKPEITSKMREKITDIANFVKKGR
SIO_010081: PCHAS_1206500
subclass of: SO_0000673
so part of: PCHAS_1206500
location: 211599..211928
location: region:211599-211928:1
so has part: feature:211599-211928:1:exon

XP_744665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211599-211928:1:exon

PCHAS_1206600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1206600
old locus tag: PCHAS_120660
so part of: sequence
location: complement(<213058..>216903)
location: region:213058-216903:-1
so has part: feature:213058-216903:-1:exon
subclass of: SO_0000010

3485384
type: Gene
SIO_000068: ncbigene

position:213058:-1
position: 213058
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:216903:-1
position: 216903
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213058-216903:-1:exon

PCHAS_1206600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1206600
old locus tag: PCHAS_120660
product: AP2 domain transcription factor AP2-I, putative
transcript id: XM_727357.2
SIO_010081: PCHAS_1206600
subclass of: SO_0000673
so part of: PCHAS_1206600
location: complement(<213058..>216903)
location: region:213058-216903:-1
so has part: feature:213058-216903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213058-216903:-1:exon

PCHAS_1206600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1206600
old locus tag: PCHAS_120660
note: term=annotation;date=20170115;qualifier=removed_pro duct=transcription factor with AP2 domain(s), putative;qualifier=added_product=ap2 domain transcription factor, putative;qualifier=added_GO:0043565;curatorName=ucb@sanger .ac.uk; term=annotation;date=20170616;qualifier=removed_product=AP 2 domain transcription factor, putative;qualifier=added_product=ap2 domain transcription factor ap2-i, putative;qualifier=added_gene_name=ap2- i;qualifier=added_literature=pmid:28618269;qualifier=added _GO:0005634;curatorName=ucb@sanger.ac.uk; ;query 1266-1266;GPI_cleavage_site_score=0.75399995; pfam_scan;Pfam:PF00847.16; E()=3.6E-16;score=59.0;query 408-460;description=AP2; pfam_scan;Pfam:PF00847.16; E()=8.8E-16;score=57.7;query 665-714;description=AP2; pfam_scan;Pfam:PF14733.2; E()=5.7E-6;score=26.4;query 64-133;description=ACDC; iprscan;InterPro:IPR028078 : AP2-coincident, C-terminal domain;Pfam:PF14733; score=5.8E-6;query 64-133;description=AP2-coincident, C-terminal domain; iprscan;InterPro:IPR001471 : Pathogenesis-related transcriptional factor/ERF, DNA-binding;Pfam:PF00847; score=3.8E-16;query 408-460;description=AP2/ERF domain; iprscan;InterPro:IPR001471 : Pathogenesis-related transcriptional factor/ERF, DNA-binding;Pfam:PF00847; score=8.8E-16;query 665-714;description=AP2/ERF domain
codon start: 1
product: AP2 domain transcription factor AP2-I, putative
translation: METLVSENNINAKSEDGNENSEKLAEDSNNIKGEENELIYEKKDEMNMNYVEQDKLDVPSLVEICKQQLIVILKDMCTDSNNSDEKISFLYHLNRLRNALTVVDLHNYIAVFGPCLSYNKLPSTWNISVCDYLKQQLNILRAADSQQNSNNYMNYYDLHNEYEEAIINKKLNYGNNSNFDNNKYGNGINDNNVNNSFNLANVVGSSKDNTNLSINGKVINQNNFLNNGANMNNYCDQNENMIDDYYDFLMRTKLPNESINNLKYMMNDKQDNPNNADADNLLSYLKKYELKSNKNNTNKNDDPSKYNNKESDYDYQEEYLKDKMLYDSDMDENNMMDHNFLDGAYNNGMNGRGPQDYDNSGNNMIGMNSNGTNINNKNYNIKLEKIKKNDTMNSWNKPNTEGHPEYLPRIPGVRFNPKKQQWLAAWNDNTREIRKYFSVKQYGFEQARILAVKARQEAEKAGARCKPMFHVHGRKAMDGISNELIKVSLINTQMSSNEMDPNYNNGIPNGSNNAMMGNNCNMIMANGNNLGAIPNGMNNMNAINGMHNMGGMNALNGMNQLNAMNMGNMNGENNNAMLGMTLVTAPNDILTKKDLLKSETNKGIKRGRGRPPKRKLSEDSHLSLDEIEQSIRRGYIASNNGGMNDNAELLECMDSYEKDCTRPMKGVSYNDRKGSWLAYWSIGKNFQMRRFPIKKLGFEKAKELAIQCRLEAEQAGATTTENRNKRGRSLLNNNLNNNLDGMLDNGSMLDHDDNMNDHTNGANKGMNRNMLLPHMHNFNNGQGLGSNITNSGGHPYQHHGMLGTIGGGVHNKIPHSDGQDSENEFSPTKRTRAPRGRRMESLTARANALTPVEGVRFDPYSYSWFAKYLENENSKEPKISKYLLKKWGFNKAHSLAVHTVKCAYKAVPFTDEELLNIFNVDAKNMMNNGNNQNGMINMNFKDNFANGGVDNNASNFTSNNFGNNNMMNNMGMINGAVGNNPNMDMNMHGGSSGNISNIGNISNPINNNYPGNIGAFKNYATPGVGNNGMVVVPPGMNNIADLNAINGLDPNGVMNAPNDNKIMDPSNINGKDPNLENDNTGMDGRNLGTPMNNNINQVNKMNHMNGYNFNNLHTGGVGNIIANNNVTGHGDNINNYVPNIDGSNASGEKMNSLNNFLIDDNKNNLEHGGMNHAANNNNSVYGQMDNEMANHNMIDQTYGIQNNNNNHGNMNPDMINNLMDHINDNNNDMGNNTQGENNNSNNSYDQNGGTNFNGYANEDGNGNINDSSMYYMNSKSEIKTE
SIO_010081: PCHAS_1206600
subclass of: SO_0000673
so part of: PCHAS_1206600
location: complement(213058..216903)
location: region:213058-216903:-1
so has part: feature:213058-216903:-1:exon

XP_732450.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213058-216903:-1:exon

PCHAS_1206700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1206700
old locus tag: PCHAS_120670
so part of: sequence
location: complement(<220480..>222951)
location: region:220480-222951:-1
so has part: feature:220480-222951:-1:exon
subclass of: SO_0000010

3496099
type: Gene
SIO_000068: ncbigene

position:220480:-1
position: 220480
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:222951:-1
position: 222951
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220480-222951:-1:exon

PCHAS_1206700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1206700
old locus tag: PCHAS_120670
product: conserved Plasmodium protein, unknown function
transcript id: XM_737908.2
SIO_010081: PCHAS_1206700
subclass of: SO_0000673
so part of: PCHAS_1206700
location: complement(<220480..>222951)
location: region:220480-222951:-1
so has part: feature:220480-222951:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220480-222951:-1:exon

PCHAS_1206700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1206700
old locus tag: PCHAS_120670
note: tmhmm; query 1-824; ;query 1-147; ;query 148-170; ;query 171-823
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MTYLRNTLRYKNVLKNYEIAWIGHNYNKTNFKLKQLCFKIDQKIIHNEKKIDNINNEIDKSIKNKKENITTYTYAYLKKIFFVAFLFYGTYESINLAKNIKSRIEEDPNLNSIIHVKINSTKIRFEQFISKLNDNVFKYIKQNINLNIILNYISEFVFYLLNYTYLFIQVVIKSFTNFWTSALRVNTLLGIKETKIGATKKEKNEKEYIKDEQDTNINCDEKIEDLHKDNIYTDIEDVLHDFEKLENFEIHKNNNNLKIDDSDQISLRNVESLQDKNNPYFYSNIKEDETEWFVKSLDERDINMNSYENTTGRNKTTSTIVKQNLSFQTDNQEKNTIKLEENVQVNEIENMKKEKYMEDEQNGIVNDEPKIKDDKDEFHVIIKSDDNIVDKEDVQLSKNMNNQDKGQKAEEKNIIAKSISDEPIVIPEKKTKRVELEKENETYNTDEIDTPINNKKENIINNDKYIKRILEKELINFKTDINSLSKEDLQNKIVDMFVNELVNERYKNILLEEEKEVLKKILTIKYNDIFLKKKKKIEKVLKKSMLKMLKEEEKLLKENYEKKRESFENSIIDKTKKEIDIEKNRMKSELKEIEESYLSKINTYAYDINRLKENITTDQIRQLKLQYINDIQHQLVYLQNCIIHDLSIEPILKDLKKHLKKDTFLEQTLKALPDNFFTCTYKLTNNSREQIKKKFYYLYKLSVKEAFYEHSNNYLYKMLINLFSYFYINYEVTSNMILSRALKNNSVLKENLLNLSYALNSVRQNKFIDSLQYIDGLTGGCRQTFESFNEDIKNVTLFKYYVRLAVSRLTLLSKLMRAYSEES
SIO_010081: PCHAS_1206700
subclass of: SO_0000673
so part of: PCHAS_1206700
location: complement(220480..222951)
location: region:220480-222951:-1
so has part: feature:220480-222951:-1:exon

XP_743001.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220480-222951:-1:exon

PCHAS_1206800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1206800
old locus tag: PCHAS_120680
so part of: sequence
location: <225085..>226698
location: region:225085-226698:1
so has part: feature:225085-226698:1:exon
subclass of: SO_0000010

3486723
type: Gene
SIO_000068: ncbigene

position:225085:1
position: 225085
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:226698:1
position: 226698
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225085-226698:1:exon

PCHAS_1206800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1206800
old locus tag: PCHAS_120680
product: eukaryotic translation initiation factor 3 subunit D, putative
transcript id: XM_728664.2
SIO_010081: PCHAS_1206800
subclass of: SO_0000673
so part of: PCHAS_1206800
location: <225085..>226698
location: region:225085-226698:1
so has part: feature:225085-226698:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225085-226698:1:exon

PCHAS_1206800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1206800
old locus tag: PCHAS_120680
note: term=annotation;date=20150803;qualifier=removed_pro duct=eukaryotic translation initiation factor 3 subunit 7, putative;qualifier=added_product=eukaryotic translation initiation factor 3 subunit d, putative;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF05091.8; E()=2.5E-151;score=505.1;query 10-531;description=eIF-3_zeta; iprscan;InterPro:IPR007783 : Eukaryotic translation initiation factor 3, subunit 7;Pfam:PF05091; score=3.8E-151;query 10-531;description=Eukaryotic translation initiation factor 3 subunit D; iprscan;InterPro:IPR007783 : Eukaryotic translation initiation factor 3, subunit 7;PIRSF:PIRSF016281; score=2.0E-194;query 1-537;description=Eukaryotic translation initiation factor 3 subunit D
codon start: 1
product: eukaryotic translation initiation factor 3 subunit D, putative
translation: MSSFKLLGVVNNRTWGPDIKNEELVNSCMEDIKKYQFEPSMKFEKIGKICDFTTTTYQKNIKDINKISGDGDNAFEEELQFQTVDLRTGQKPKGTLFNKKKIINKQTTQAFAQKQQEEDNLYSSRIKTAEQKKQKMLQQAKTARLNARHRIFTEWSNEPTPSWTVDCEIMFNELPKKSIKIDHLKIEDIFFRGKVLYYDKRFENINVKNPPFLAHLNKDANILVCKPSDDQALMEILDNEEKKAKENNSNGLIIVSTDQILSCLMSCVHSKYSWHLIIKKKGNRIIIDKDDDSIIDLLTVNENSLDAPTQDSENKINSLQALGLEAVKINERFKNHVQLNNQIAEEYDNTSFNSKHCNNNSNILYRYRKINLPPVIHGSSKTSCTIITRGEIHSKIKGSNNSYVYICSLNEYDIKSHKNWRSQIENQKGALLANEIRNNTYKLHKFICQALLSGCDDIKLGFVSRKNANDYENHNILSIQSHKTKDLSTQIGLKYENIWGILKFIIDNISDRPDGKYVILKDPLKSLLRLYCTHEDD
SIO_010081: PCHAS_1206800
subclass of: SO_0000673
so part of: PCHAS_1206800
location: 225085..226698
location: region:225085-226698:1
so has part: feature:225085-226698:1:exon

XP_733757.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225085-226698:1:exon

PCHAS_1206900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1206900
old locus tag: PCHAS_120690
so part of: sequence
location: <229831..>235782
location: region:229831-235782:1
so has part: feature:229831-235782:1:exon
subclass of: SO_0000010

3496875
type: Gene
SIO_000068: ncbigene

position:229831:1
position: 229831
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:235782:1
position: 235782
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229831-235782:1:exon

PCHAS_1206900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1206900
old locus tag: PCHAS_120690
product: histone deacetylase 2, putative
transcript id: XM_016798804.1
SIO_010081: PCHAS_1206900
subclass of: SO_0000673
so part of: PCHAS_1206900
location: <229831..>235782
location: region:229831-235782:1
so has part: feature:229831-235782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229831-235782:1:exon

PCHAS_1206900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1206900
old locus tag: PCHAS_120690
note: term=annotation;date=20121106;qualifier=added_gene_ name=IPK1;qualifier=added_literature=pmid:23123170;qualifi er=removed_product=histone deacetylase, putative;qualifier=added_product=inositol polyphosphate kinase, putative;qualifier=added_ec_number=2.7.1.151;curatorName=u cb@sanger.ac.uk; term=annotation;date=20140815;qualifier=removed_product=in ositol polyphosphate kinase, putative;qualifier=added_product=histone deacetylase 2, putative;qualifier=added_literature=pmid:25121747;qualifie r=added_gene_name=hda2;qualifier=removed_gene_name=ipk1;qu alifier=removed_ec_number=2.7.1.151;qualifier=added_ec_num ber=3.5.1.98;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF03770.12; E()=4.1E-32;score=111.5;query 1706-1972;description=IPK; pfam_scan;Pfam:PF00850.15; E()=5.9E-34;score=117.9;query 592-740;description=Hist_deacetyl; pfam_scan;Pfam:PF00850.15; E()=1.8E-31;score=109.7;query 841-964;description=Hist_deacetyl; pfam_scan;Pfam:PF00850.15; E()=2.9E-9;score=36.7;query 345-452;description=Hist_deacetyl; iprscan;InterPro:IPR023696 : Ureohydrolase domain superfamily;Superfamily:SSF52768; score=5.28E-84;query 334-972;description=Ureohydrolase domain superfamily; iprscan;InterPro:IPR000286 : Histone deacetylase superfamily;PRINTS:PR01270; score=2.9E-8;query 660-683;description=Histone deacetylase family; iprscan;InterPro:IPR000286 : Histone deacetylase superfamily;PRINTS:PR01270; score=2.9E-8;query 694-709;description=Histone deacetylase family; iprscan;Superfamily:SSF56104; score=4.9E-47;query 1418-1976;description=null; iprscan;InterPro:IPR005522 : Inositol polyphosphate kinase;Pfam:PF03770; score=3.9E-32;query 1706-1972;description=Inositol polyphosphate kinase; iprscan;InterPro:IPR023801 : Histone deacetylase domain;Pfam:PF00850; score=2.3E-8;query 351-452;description=Histone deacetylase domain; iprscan;InterPro:IPR023801 : Histone deacetylase domain;Pfam:PF00850; score=1.5E-31;query 841-964;description=Histone deacetylase domain; iprscan;InterPro:IPR023801 : Histone deac…
codon start: 1
product: histone deacetylase 2, putative
translation: MKKNDSSNNEKKQKKNNSIKQDSTTNLNFSKKRIIFNNLIVDNFRNINDINNYLRNSSLNSIGNKNKNVINDKYADNYPKDNKKKKSRNYNAAIESVEKNLSTISLFNNDNNESIFNNSISAIIKRSIKNNKKISNDLKRVLKKKGKSIKKERRKKKHKHITRKDKDKKKKTKKNIISIIKKKTKKYNIRENISTSGTISNSTKKSHRKHKKHKKINFQSSSNNEDGFSSHKHALDKIYGSLKNNNSSIDPVIKNFYIECENNNIISTDEYSNYYKPPSDIYDNDNYIHNKYQISNIYANAKDTNNNFNSYIKRKKNSKKIDKFEHSENDCIGFVCDEEYMCEYLHFDENHVESPDRIRCIIKALKEKNIINKMVQIKCREALYDEIKECHTRAHINNIFYSLKKKLKYKKKDVIYPFDKHDTYYTFHTGTVSKRAVGGLLNLCDAILSDKNEKFKYIDFKKSLRYNYNFFKKNFSNDINKFIGRNINHNTHLKRSKSDSSLTSLKNSRRNSLLNNDNYANNNENFLVNEWRNKLPKNKKTSCYSYKSMCESVKNNLDASHSQNLEQFQEYPSNFNDKEKLYNSDSSNNNNAYTEVAGIETDQVQTLNSSENHLFNESKNNIQFKKMRSYSTTMCNIKDCDSNNINQISDLKCGFAAIRPPGHHCSRNSPSGFCIFNNISVACKYIYMKYGIKKIFIFDWDVHHNNGTQEIFYNDKNVLCFSIHRFDSNKKVKKGKSKETNKGKNVKKDSSAYNQKNKKKKKTNRANTASNISTAASVAATSNLNKYNTTTKRKAKINSKNKNKDNGLNSYNSSSNSDTNKKEKKKTKKKKTNKSRKSTEENGFYPRTGAKSELGEKSGYKFNINVPLEKGYNNCDVYYVFKFLLLPILQAFQPEFIFISSGFDASIRDPLGECNLTHTLYEWMTLQLKKFAKIYCDGRIILVLEGGYNLKYLPKCTVACLKALIKKNIKIPNQETTRNDGNNLMLNDQTNEEDQDSKENNNNNESQEGQLNLENDNLSDKPMYTPTDENTNMHATNNDDSQLDKSQNDIDMDDDGYASPVINKMNETNSSLENEKLTNLKNDSRKISSTYDHENFYKFNNLENYPKKGDKIFNYYCENPYPSNKKKKKKKLFTRGKLHYSTYKVIKYFLSIFKGEPYYLNVNLPPYNKFVKKKGLENDSSSNLGHKIKFYDEIYNSSDDNSYGKEILSGYTKKKIKELNMYNQQANEFSSLSSSPSNISNSDLYFSNDDLDGTDTNSYSSHYSMQKIITLNKLKSKINSTINNSSSRNTNKKYKNQINEMGFSNSINNHFDKNNEFYDLTNYIDNDFLMNTSNKKNESKSKTKLSKRIIARNSRNQANFQNSNKMKKYNYQCHTISNVSKYNGIHRYINGDLTNIKYSQDQLQNSFAMYTQSKKGYIFFYGSGHKNQWVLPVNKKLTKIIKLCSKSEAFFYAWLYLCCDKKICITNTQENYSSILDDNITVEGTKLNKDFSDEEIKLCKELLKFTVPCYQVFLEENQLMQLGRVEELYESLDEAEHDGVKSENDNSYQYNEHSNNGSVNNDSRQNNMDDNKYETYETQSNSDIKENETPNDPEFYESKIMENENVDNEKERNDFYDVIEDSEKEEGEYSEKEEGEYSEKEEGEYSEKENDENSEKEEGEYSEKENDENNSAPINIDNNNDLIDDTYENKNDIEKKIYINKLKTAICLRNVLSTMRHPCAMDIKMGIKLYGDNCDEESIQKKIEKAKNRSCLSHGFHLTSLIGWNKKKKQPFFISKEDAHLIKNDDKFVEAFLSYFLACDNIQLSVFLLKKVLIILEHMKVFFENQSYFAFCGSSLLFVFDSDPSKNKFDDKNNDENANNSDNSNAENSNNDNAFTSGHESDKSESSKEQNYDHEEEKKTYEEIFNFRDHIQKQFEDSLTTEEKNVYMGSKLNTHILKSASVYIIDFAHASLDKKEQDQGFLLGITSLHRIIIKTMEKVKASI
SIO_010081: PCHAS_1206900
subclass of: SO_0000673
so part of: PCHAS_1206900
location: 229831..235782
location: region:229831-235782:1
so has part: feature:229831-235782:1:exon

XP_016654173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229831-235782:1:exon

PCHAS_1207000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1207000
old locus tag: PCHAS_120700
so part of: sequence
location: <239159..>249916
location: region:239159-249916:1
so has part: feature:239159-249916:1:exon
subclass of: SO_0000010

3498036
type: Gene
SIO_000068: ncbigene

position:239159:1
position: 239159
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:249916:1
position: 249916
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239159-249916:1:exon

PCHAS_1207000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1207000
old locus tag: PCHAS_120700
product: zinc finger protein, putative
transcript id: XM_016798805.1
SIO_010081: PCHAS_1207000
subclass of: SO_0000673
so part of: PCHAS_1207000
location: <239159..>249916
location: region:239159-249916:1
so has part: feature:239159-249916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239159-249916:1:exon

PCHAS_1207000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1207000
old locus tag: PCHAS_120700
note: term=annotation;date=20160704;qualifier=added_produ ct=zinc finger protein, putative;qualifier=removed_GO:0006350 (obsolete GO term);qualifier=removed_product=conserved Plasmodium protein, unknown function;qualifier=added_product=zinc finger protein, putative;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF00628.25; E()=4.0E-7;score=29.7;query 3526-3584;description=PHD; pfam_scan;Pfam:PF13771.2; E()=1.3E-8;score=34.8;query 3022-3095;description=zf-HC5HC2H; iprscan;InterPro:IPR019787 : Zinc finger, PHD-finger;Pfam:PF00628; score=4.1E-7;query 3526-3584;description=Zinc finger, PHD-finger; iprscan;InterPro:IPR019787 : Zinc finger, PHD-finger;Prosite:PS50016; score=9.597;query 3524-3585;description=Zinc finger, PHD-finger; iprscan;InterPro:IPR019786 : Zinc finger, PHD-type, conserved site;Prosite:PS01359; score=1.0;query 3527-3582;description=Zinc finger, PHD-type, conserved site; iprscan;Pfam:PF13771; score=1.6E-8;query 3022-3095;description=null; iprscan;InterPro:IPR001965 : Zinc finger, PHD-type;SMART:SM00249; score=0.0039;query 2266-2319;description=Zinc finger, PHD-type; iprscan;InterPro:IPR001965 : Zinc finger, PHD-type;SMART:SM00249; score=0.012;query 3040-3096;description=Zinc finger, PHD-type; iprscan;InterPro:IPR001965 : Zinc finger, PHD-type;SMART:SM00249; score=2.7;query 1456-1516;description=Zinc finger, PHD-type; iprscan;InterPro:IPR001965 : Zinc finger, PHD-type;SMART:SM00249; score=9.2E-9;query 3526-3583;description=Zinc finger, PHD-type; iprscan;InterPro:IPR011011 : Zinc finger, FYVE/PHD-type;Superfamily:SSF57903; score=5.54E-6;query 1449-1490;description=Zinc finger, FYVE/PHD-type; iprscan;InterPro:IPR011011 : Zinc finger, FYVE/PHD-type;Superfamily:SSF57903; score=1.42E-10;query 3516-3584;description=Zinc finger, FYVE/PHD-type
codon start: 1
product: zinc finger protein, putative
translation: MERGRPAGRRNNDLMSTWREGNSRNDSSDNHQFWSNIENQYFSNFDKRIITTFEDHIKCTDYICNKIKNKKIKKEIFQNIKCQKSSVKIKLNINDKKNEKKKNGAPNIPKYMLQNNQFFNNNPFGQENLISQHNNQFLIDPKNDIRNYKANINSLFNDKQYMANMSHINNIENMMSMNHMNNRFRDYPPMFGNEPCFIDGMPMAGNNLLLNTMPNNTNIEKNESNYPDDMNKNINLPSTNNTNETNDINQTNLNLTDSSDNKNIQLGNANADANIVSPSIDNSNKNIDITNLNADNSNGLIQHEHSENSNAPNINDQTNVNETDNNEEQNDVNTENNADIANNNEFPKSNDNEFSENSNDNVDTLGKSENDDYAKGNEINDLQNASEQNNTTVSNCPQNEPSLSSENKNDVIENVVMTSNDDEDNGKKNDNDLSDSGSLNNKEGTTDALSNDLNNCDPCNNNTIENSSIKNEENFNTNNAMEYGMRNMNSEDVIENVNNLSNTINAKGMDSSFIPNINNNDNNYFSPYKQFNNNTYPNSMNNPYDNKIKTDMNIYPMPMNNFNRDMYSPHDAQATNMYSNIYQNNKSDQIGMNNNQNDSSKQTTIRNASNSGNINSDSFKNMYPYGNNGMLKMDNISLGNPNFGINDENMLFMNKNMAIYNNGMPGDIINGPNKSLPFNDMINFKNNNFYPNGYYNFNEMVNYQNAMAFDKYGNDKYFQKLKNDKSKNKRKNGTKMRKHSQMDEQEKTQTRLRSSRHDGKFFNPLLNKKYDGVGRLPYIHNTPIPNGLHISIYVPKNYDFSENNEKPSIYDDKIEQAETTNNIDKDADNNDHSIVNPIDNTNQVCDTKKKTEQEDTYEIETLAKLLTEITLGDKKYLSNRHITMEDKERCYKCFLDELKNYNTLPIILGNILPYWNKQKNNNLVYKIKNLRANNAKPKYIPIQSVNKVLARKKIKKKKILKKKKKSKKKKKGKKNNTATNLLNESNLTEQNALKNEEVSELDKNNAEISTGQSLPTNKTENEKEGTVIENDNQKNASSSTQNKESEEKKPKKSWRSYFLMSRSDNKATDDDNASKKNDDEKNDKETQSGEGKEEHATDENNKKIGSNDEKNNTIGVNENGTINEKKEKTINSKKSNLKKKTKNKLRHFGTYGKIGSFNFLKKYKFSTPKNSTVPFNSSIFSLQKNQHMSNVYFEFILTNINLDKYKRNILNVNYNHNNSINKKNRIHCIKLAKLRNTNTNNSTNSKSKKNINQTLQEKKENNEITTTNKNENTMNSNNYLDGTVNTTSNSCLGDSTLFTPNKIEEDKFPDSADQSNSIINTENNTENKNITNEISTLNETGEVDMLLKNNKHNKDIKNINEEICVLFSRYMHNIKQQKKMIVKLLDNIKNEKKKPYKYWYSIEDKMINFYINEYLKNKLNTKHTYTLSKQIVDLLKLRVTVNHSSQLPNSWTEKALCNICSVGEDWDDNPIVFCDCCYTPMHSFCTGFRNVKNQNLVKRNPNMSDREDTQNCDIEKEENTKYKNNNYKYSGPKNSAYNNTNGVNKNEYYQQYNKEGQITKNYFNNSDINKDGNKYAHDKNNCSGNHGKNGIDDKNKNKINLNVIKYLMEDNFININSPNSMFNSIVSNNNDEKNDNEKLDSEKEDNQTNYATLDTQLKNNENMDIKNEHENREDEGYYKCGLNDTNNNDNLDKTDEKKESYLDTSIFIHDKEDRHDEDEESSQIKMENPIIEQNIDQPTSNPNDEKIKQETNNFSTDVAKTNTGYPPNTEEEQWICPLCSYLRNQILYIEDSIAFKIIRHLSGPQKKKDIDLLIKACNEYTNDNNNTTQESGDTANNEQNNNKNEVDDKKKKEAFSYIPPEEIIFQSTSQMYAYKYKSIMLLFDIEYDINYYKLKYQIEIKDSHDFFEKIVLKNPNIYKYKNIFNTIMVSKIDKDNNYTKFLNENIKMFRQESFYINPNFEDSDSEEAEQETKKKKRGRKPLLNKNEYSNNKPYHDKVSN…
SIO_010081: PCHAS_1207000
subclass of: SO_0000673
so part of: PCHAS_1207000
location: 239159..249916
location: region:239159-249916:1
so has part: feature:239159-249916:1:exon

XP_016654174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239159-249916:1:exon

PCHAS_1207100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1207100
old locus tag: PCHAS_120710
so part of: sequence
location: complement(<250565..>251737)
location: region:250565-251737:-1
so has part: feature:250565-251737:-1:exon
subclass of: SO_0000010

3498037
type: Gene
SIO_000068: ncbigene

position:250565:-1
position: 250565
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:251737:-1
position: 251737
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250565-251737:-1:exon

PCHAS_1207100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1207100
old locus tag: PCHAS_120710
product: endonuclease, putative
transcript id: XM_739825.2
SIO_010081: PCHAS_1207100
subclass of: SO_0000673
so part of: PCHAS_1207100
location: complement(<250565..>251737)
location: region:250565-251737:-1
so has part: feature:250565-251737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250565-251737:-1:exon

PCHAS_1207100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1207100
old locus tag: PCHAS_120710
note: query 364-364;GPI_cleavage_site_score=0.10399999; pfam_scan;Pfam:PF00867.14; E()=4.0E-16;score=59.0;query 237-317;description=XPG_I; pfam_scan;Pfam:PF00752.13; E()=1.3E-4;score=22.2;query 1-77;description=XPG_N; iprscan;InterPro:IPR029060 : PIN domain-like;Superfamily:SSF88723; score=6.21E-28;query 3-317;description=PIN-like domain superfamily; iprscan;InterPro:IPR008918 : Helix-hairpin-helix motif, class 2;SMART:SM00279; score=6.8E-11;query 304-337;description=Helix-hairpin-helix motif, class 2; iprscan;InterPro:IPR006086 : XPG I;SMART:SM00484; score=0.0073;query 235-302;description=XPG-I domain; iprscan;InterPro:IPR006086 : XPG I;Pfam:PF00867; score=4.0E-16;query 237-317;description=XPG-I domain; iprscan;InterPro:IPR006084 : DNA repair protein (XPGC)/yeast Rad;PRINTS:PR00853; score=2.2E-10;query 254-274;description=XPG/Rad2 endonuclease; iprscan;InterPro:IPR006084 : DNA repair protein (XPGC)/yeast Rad;PRINTS:PR00853; score=2.2E-10;query 307-322;description=XPG/Rad2 endonuclease; iprscan;InterPro:IPR006084 : DNA repair protein (XPGC)/yeast Rad;PRINTS:PR00853; score=2.2E-10;query 29-43;description=XPG/Rad2 endonuclease; iprscan;InterPro:IPR006085 : XPG N-terminal;Pfam:PF00752; score=1.4E-4;query 1-77;description=XPG N-terminal; iprscan;InterPro:IPR036279 : 5'-3' exonuclease, C-terminal domain superfamily;Superfamily:SSF47807; score=2.69E-17;query 302-387;description=5'-3' exonuclease, C-terminal domain superfamily
codon start: 1
product: endonuclease, putative
translation: MTIKGFISFIHKKIPSTIKKIDDIKSFEGKKFIIDGTFFIYKFMYVAWKHILNDKNRDSKYKANELGTYILIRQYIIKKSIELLKNQHEYFKSLKINTLYIIEDIGARCELQPIDFKCKRHVWKERDTIRKKKKLFDILNADAHKNILNSSDGLSDTSSSSIGSILNGSSKKITNIITPFCDKKVSPNKICERKIGKKEKVEIIVDEDGTHDLFKKNIFIKINSQTANDIYNYLLLEKIPIFITKNDAEKECAIQCSHEKDIVVSDDTDALAFGAPNLIRFITNKKKRHIINKDEILSELDINYEQFIDFCILSGCDYSAKIPGIGPIKAYEIIKKYKTIESFLESSAFDKYSNTKRFNQKLSDVSMTLKDYILNEFTYEQARKIFFNSY
SIO_010081: PCHAS_1207100
subclass of: SO_0000673
so part of: PCHAS_1207100
location: complement(250565..251737)
location: region:250565-251737:-1
so has part: feature:250565-251737:-1:exon

XP_744918.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250565-251737:-1:exon

PCHAS_1207200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1207200
old locus tag: PCHAS_120720
so part of: sequence
location: <252775..>254081
location: region:252775-254081:1
so has part: feature:252775-254081:1:exon
subclass of: SO_0000010

3485708
type: Gene
SIO_000068: ncbigene

position:252775:1
position: 252775
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:254081:1
position: 254081
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252775-254081:1:exon

PCHAS_1207200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1207200
old locus tag: PCHAS_120720
product: AP-5 complex subunit sigma-1, putative
transcript id: XM_016798806.1
SIO_010081: PCHAS_1207200
subclass of: SO_0000673
so part of: PCHAS_1207200
location: join(<252775..252879,252996..253117,253235..253342,253428..253473,253576..253656,253836..253887,253984..>254081)
location: region:252775-254081:1
so has part: feature:252775-252879:1:exon
so has part: feature:252996-253117:1:exon
so has part: feature:253235-253342:1:exon
so has part: feature:253428-253473:1:exon
so has part: feature:253576-253656:1:exon
so has part: feature:253836-253887:1:exon
so has part: feature:253984-254081:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252775-252879:1:exon

position:252879:1
position: 252879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:252996-253117:1:exon

position:252996:1
position: 252996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253117:1
position: 253117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:253235-253342:1:exon

position:253235:1
position: 253235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253342:1
position: 253342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:253428-253473:1:exon

position:253428:1
position: 253428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253473:1
position: 253473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:253576-253656:1:exon

position:253576:1
position: 253576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253656:1
position: 253656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:253836-253887:1:exon

position:253836:1
position: 253836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253887:1
position: 253887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:253984-254081:1:exon

position:253984:1
position: 253984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1207200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1207200
old locus tag: PCHAS_120720
note: term=annotation;date=20160119;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=ap-5 complex subunit sigma-1, putative;qualifier=added_gene_name=ap5s1;curatorName=ucb@s anger.ac.uk; pfam_scan;Pfam:PF15001.2; E()=4.1E-29;score=101.8;query 1-190;description=AP-5_subunit_s1; iprscan;InterPro:IPR029392 : AP-5 complex subunit sigma-1;Pfam:PF15001; score=4.2E-29;query 1-190;description=AP-5 complex subunit sigma-1
codon start: 1
product: AP-5 complex subunit sigma-1, putative
translation: MVYGIIIHSSESEQLYFSTYYNLVNNDINQTSRQQIIIKKVIEEINYYKEDKENYENTNKNNKDKYLDIFGVFIPSRAPNNEFKIDNEGFFKIENISLFKNKINIMWKVLNKVCYTLMFFPHENIHMADNFLNTLIYVLMENYEKLGKSNKNNMNKFNPDTVLAILYFFLPKGQFMILTPDYIQILSNKVKEFLGEKGTPKKE
SIO_010081: PCHAS_1207200
subclass of: SO_0000673
so part of: PCHAS_1207200
location: join(252775..252879,252996..253117,253235..253342,253428..253473,253576..253656,253836..253887,253984..254081)
location: region:252775-254081:1
so has part: feature:252775-252879:1:exon
so has part: feature:252996-253117:1:exon
so has part: feature:253235-253342:1:exon
so has part: feature:253428-253473:1:exon
so has part: feature:253576-253656:1:exon
so has part: feature:253836-253887:1:exon
so has part: feature:253984-254081:1:exon

XP_016654175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252775-252879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:252996-253117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:253235-253342:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:253428-253473:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:253576-253656:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253836-253887:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253984-254081:1:exon

PCHAS_1207300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1207300
old locus tag: PCHAS_120730
so part of: sequence
location: complement(<254659..>256339)
location: region:254659-256339:-1
so has part: feature:254659-256339:-1:exon
subclass of: SO_0000010

3494845
type: Gene
SIO_000068: ncbigene

position:254659:-1
position: 254659
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:256339:-1
position: 256339
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254659-256339:-1:exon

PCHAS_1207300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1207300
old locus tag: PCHAS_120730
product: 26S protease regulatory subunit 4, putative
transcript id: XM_016798808.1
SIO_010081: PCHAS_1207300
subclass of: SO_0000673
so part of: PCHAS_1207300
location: complement(join(<254659..255953,256291..>256339))
location: region:254659-256339:-1
so has part: feature:256291-256339:-1:exon
so has part: feature:254659-255953:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256291-256339:-1:exon

position:256291:-1
position: 256291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254659-255953:-1:exon

position:255953:-1
position: 255953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1207300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1207300
old locus tag: PCHAS_120730
note: term=annotation;date=20161007;qualifier=added_produ ct=26S proteasome AAA-ATPase subunit RPT2, putative;qualifier=removed_GO:0005838;qualifier=removed_GO :0004175;qualifier=removed_GO:0006508;qualifier=added_GO:0 008540;qualifier=added_GO:0070682;qualifier=added_GO:00065 11;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF00004.25; E()=1.5E-42;score=145.0;query 229-361;description=AAA; iprscan;InterPro:IPR003960 : AAA ATPase, subdomain;Prosite:PS00674; score=1.0;query 332-350;description=ATPase, AAA-type, conserved site; iprscan;InterPro:IPR003593 : AAA+ ATPase, core;SMART:SM00382; score=1.3E-21;query 225-364;description=AAA+ ATPase domain; iprscan;InterPro:IPR003959 : AAA ATPase, core;Pfam:PF00004; score=1.7E-42;query 229-361;description=ATPase, AAA-type, core; iprscan;InterPro:IPR005937 : 26S proteasome subunit P45;TIGR_TIGRFAMS:TIGR01242; score=8.4E-141;query 84-433;description=26S proteasome regulatory subunit P45-like; iprscan;InterPro:IPR027417 : P-loop containing nucleoside triphosphate hydrolase;Superfamily:SSF52540; score=3.07E-65;query 190-437;description=P-loop containing nucleoside triphosphate hydrolase
codon start: 1
product: 26S protease regulatory subunit 4, putative
translation: MGNAQGGMNNNPYGFLGKKDDKDKGKDKEKKKLESSPPSHIGKRKKKKKGATGHSKLPTVTPNTKCRLKLLKLERIKDYLLLEEEFITNQEQIKTTDDKNYGKLKIDDLRGSPMSVGTLEELIDENHGIIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEDHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQLDLRKARDKALYQKKGNIPEGLYL
SIO_010081: PCHAS_1207300
subclass of: SO_0000673
so part of: PCHAS_1207300
location: complement(join(254659..255953,256291..256339))
location: region:254659-256339:-1
so has part: feature:256291-256339:-1:exon
so has part: feature:254659-255953:-1:exon

XP_016654176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256291-256339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254659-255953:-1:exon

PCHAS_1207400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1207400
old locus tag: PCHAS_120740
so part of: sequence
location: <258960..>261890
location: region:258960-261890:1
so has part: feature:258960-261890:1:exon
subclass of: SO_0000010

3485117
type: Gene
SIO_000068: ncbigene

position:258960:1
position: 258960
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:261890:1
position: 261890
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258960-261890:1:exon

PCHAS_1207400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1207400
old locus tag: PCHAS_120740
product: protein GPR89, putative
transcript id: XM_727095.2
SIO_010081: PCHAS_1207400
subclass of: SO_0000673
so part of: PCHAS_1207400
location: <258960..>261890
location: region:258960-261890:1
so has part: feature:258960-261890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:258960-261890:1:exon

PCHAS_1207400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1207400
old locus tag: PCHAS_120740
note: term=annotation;date=20180319;qualifier=added_GO:00 16021;curatorName=ucb@sanger.ac.uk; term=annotation;date=20181130;qualifier=removed_product=co nserved Plasmodium protein, unknown function;qualifier=added_product=protein gpr89, putative;curatorName=ucb@sanger.ac.uk; ;query 1-6; ;query 62-73; ;query 165-244; ;query 310-814; ;query 877-903; ;query 976-976; ;query 7-29; ;query 44-61; ;query 74-96; ;query 147-164; ;query 245-267; ;query 287-309; ;query 815-837; ;query 857-876; ;query 904-926; ;query 953-975; ;query 30-43; ;query 97-146; ;query 268-286; ;query 838-856; ;query 927-952; true; ;query 958-958;GPI_cleavage_site_score=0.12900001; tmhmm; query 1-977; pfam_scan;Pfam:PF12430.4; E()=3.0E-15;score=56.3;query 799-969;description=ABA_GPCR; iprscan;InterPro:IPR025969 : Abscisic acid G-protein coupled receptor-like domain;Pfam:PF12430; score=6.5E-15;query 799-969;description=Abscisic acid G-protein coupled receptor-like domain
codon start: 1
product: protein GPR89, putative
translation: MYTKFVCEVIAIIFLHGIFYKVSAHYLLRYLDILNYSNQFNKNIFFITFLACMSIFSLFILELSNLISSVMITYIWHINICILMCLLYIVIPIEFINTIFDSRNYKEILSPGFYSHSHIKLIKKYYIKISQIYKEKNGGSTKIKKYFFIFRSIIFLSFLWLGLVELKKMIYKKNYNYVIADDNALIFREYILYTKINQNKNRIKEFNKRMFYLYIQNKNKCIDYDNINQKYEYKENKKTKIQNIFYQLYNFINILIFIILNHFMYFYQFVIRELLINLCALGVTTNSIVAGISSMYFIYDYIITFVYYLNLPKIQIQIYNIEERILINFTKYIFKKEQLQKIESKFNIKNSINNNSTNFNGDPKNDLNFLSTRTSIFPLGLLNKNKKSFNSDKEHNRIERHRKTINIPYILNDVSFMDKSNINMTAFNFKKRNTKNSTSIDKNINDINYKKNSIDTVHSKTSFTTNGPNEYCNNNSNNNQEDNTRRFSSFAGFKSKLKSICTFKSKGLFDYEKDMQYNYSDLNMDLLNNNINANEYEELNLRSLKKHKLRKSNGNLSDHESTAINYFYKNINENNDYVLKRSNSSPYILTKTNLNINSDREKDSSSDEEQILITCKSLTTIPKRDADDLEDKQNDENSVMTNDKTDNNDASDTNSKTDTNCVDKKTKKETPDANQIFKSVSFPENQHMKKFYNKTNREQIEGLKHLYKLKKPKMDIDNENKTRSYKMDGMHHAYPDIDNYSNTNTDKDISYNNTNDVDNNIESYNKLKKEIENIVYTNTSMYYSLNDILSRKIEIQKNTNSLFGKINVFLNSIMFLTLIYKIIASILNIIFIRIYIRDPFSKLIEKICLFFKIKYNIAIIYAPYISLIYISYIVAINMKKFLQQVIQISTNFSFYFKLFSNMWILLISELMGLYFVTNSLILASYLPVNYEHTMNFAAGDNYDYNVFHIHSDYVFISSFATTFTFFVLHMLYFYFF
SIO_010081: PCHAS_1207400
subclass of: SO_0000673
so part of: PCHAS_1207400
location: 258960..261890
location: region:258960-261890:1
so has part: feature:258960-261890:1:exon

XP_732188.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258960-261890:1:exon

PCHAS_1207500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1207500
old locus tag: PCHAS_120750
so part of: sequence
location: <264094..>265251
location: region:264094-265251:1
so has part: feature:264094-265251:1:exon
subclass of: SO_0000010

27794948
type: Gene
SIO_000068: ncbigene

position:264094:1
position: 264094
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:265251:1
position: 265251
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264094-265251:1:exon

PCHAS_1207500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1207500
old locus tag: PCHAS_120750
product: zinc finger (CCCH type) protein, putative
transcript id: XM_016798809.1
SIO_010081: PCHAS_1207500
subclass of: SO_0000673
so part of: PCHAS_1207500
location: <264094..>265251
location: region:264094-265251:1
so has part: feature:264094-265251:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264094-265251:1:exon

PCHAS_1207500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1207500
old locus tag: PCHAS_120750
note: iprscan;InterPro:IPR000571 : Zinc finger, CCCH-type;SMART:SM00356; score=0.14;query 83-109;description=Zinc finger, CCCH-type; iprscan;InterPro:IPR000571 : Zinc finger, CCCH-type;Prosite:PS50103; score=7.413;query 46-73;description=Zinc finger, CCCH-type; iprscan;InterPro:IPR000571 : Zinc finger, CCCH-type;Prosite:PS50103; score=11.657;query 83-110;description=Zinc finger, CCCH-type; iprscan;InterPro:IPR000571 : Zinc finger, CCCH-type;Prosite:PS50103; score=14.971;query 11-38;description=Zinc finger, CCCH-type; iprscan;InterPro:IPR000571 : Zinc finger, CCCH-type;SMART:SM00356; score=0.05;query 11-37;description=Zinc finger, CCCH-type; iprscan;InterPro:IPR036855 : Zinc finger, CCCH-type superfamily;Superfamily:SSF90229; score=5.49E-7;query 80-114;description=Zinc finger, CCCH-type superfamily; iprscan;InterPro:IPR036855 : Zinc finger, CCCH-type superfamily;Superfamily:SSF90229; score=4.45E-7;query 8-42;description=Zinc finger, CCCH-type superfamily
codon start: 1
product: zinc finger (CCCH type) protein, putative
translation: MNTSIEIKHQFSKTKICKHFLENKCTNKKNCNFAHVLEELKPLPDLKNTKLCSSLKKNIPCNNHLCAYAHGIENLQPSTNLSTYKTNLCYFWKKKKCMNQWKCRFAHGIEEIRPLKTESQISLQTKRNWNDKINKKIENKTPKKIGKKKENIITKDTQKIFEKIQKEKQKKEEIYYATESVNWDFNLNKNNSKHKHEMFNNKKEIRNSKDDSSMMYNFKLLENLSTIDSDFSYFDDCFMYGNDKDNINDNKVANSYFDIFPNMYMNDYPISGDKQICGSTNCSSKNNSYNYIQIFEGDENISYDMSSFNFGFLTQKNDYHTNFDKKICTEMNNNIQNNLEKHQNDQGEIISNNNKKHSETNSEYLKDIYKSISELSKKRENLYIY
SIO_010081: PCHAS_1207500
subclass of: SO_0000673
so part of: PCHAS_1207500
location: 264094..265251
location: region:264094-265251:1
so has part: feature:264094-265251:1:exon

XP_016654177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264094-265251:1:exon

PCHAS_1207600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1207600
old locus tag: PCHAS_120760
so part of: sequence
location: complement(<266936..>269078)
location: region:266936-269078:-1
so has part: feature:266936-269078:-1:exon
subclass of: SO_0000010

3491861
type: Gene
SIO_000068: ncbigene

position:266936:-1
position: 266936
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:269078:-1
position: 269078
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266936-269078:-1:exon

PCHAS_1207600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1207600
old locus tag: PCHAS_120760
product: tubulin beta chain, putative
transcript id: XM_016798810.1
SIO_010081: PCHAS_1207600
subclass of: SO_0000673
so part of: PCHAS_1207600
location: complement(join(<266936..267224,267405..268357,268983..>269078))
location: region:266936-269078:-1
so has part: feature:268983-269078:-1:exon
so has part: feature:267405-268357:-1:exon
so has part: feature:266936-267224:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:268983-269078:-1:exon

position:268983:-1
position: 268983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:267405-268357:-1:exon

position:267405:-1
position: 267405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268357:-1
position: 268357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:266936-267224:-1:exon

position:267224:-1
position: 267224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1207600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1207600
old locus tag: PCHAS_120760
note: query 413-413;GPI_cleavage_site_score=0.172; pfam_scan;Pfam:PF00091.21; E()=1.6E-68;score=230.7;query 3-211;description=Tubulin; pfam_scan;Pfam:PF03953.13; E()=1.1E-41;score=141.9;query 261-381;description=Tubulin_C; iprscan;InterPro:IPR002453 : Beta tubulin;PRINTS:PR01163; score=3.8E-118;query 230-239;description=Beta tubulin; iprscan;InterPro:IPR002453 : Beta tubulin;PRINTS:PR01163; score=3.8E-118;query 377-388;description=Beta tubulin; iprscan;InterPro:IPR002453 : Beta tubulin;PRINTS:PR01163; score=3.8E-118;query 347-370;description=Beta tubulin; iprscan;InterPro:IPR002453 : Beta tubulin;PRINTS:PR01163; score=3.8E-118;query 245-258;description=Beta tubulin; iprscan;InterPro:IPR002453 : Beta tubulin;PRINTS:PR01163; score=3.8E-118;query 88-99;description=Beta tubulin; iprscan;InterPro:IPR002453 : Beta tubulin;PRINTS:PR01163; score=3.8E-118;query 412-430;description=Beta tubulin; iprscan;InterPro:IPR002453 : Beta tubulin;PRINTS:PR01163; score=3.8E-118;query 265-281;description=Beta tubulin; iprscan;InterPro:IPR002453 : Beta tubulin;PRINTS:PR01163; score=3.8E-118;query 108-126;description=Beta tubulin; iprscan;InterPro:IPR002453 : Beta tubulin;PRINTS:PR01163; score=3.8E-118;query 41-58;description=Beta tubulin; iprscan;InterPro:IPR002453 : Beta tubulin;PRINTS:PR01163; score=3.8E-118;query 152-164;description=Beta tubulin; iprscan;InterPro:IPR002453 : Beta tubulin;PRINTS:PR01163; score=3.8E-118;query 212-224;description=Beta tubulin; iprscan;InterPro:IPR002453 : Beta tubulin;PRINTS:PR01163; score=3.8E-118;query 311-329;description=Beta tubulin; iprscan;InterPro:IPR002453 : Beta tubulin;PRINTS:PR01163; score=3.8E-118;query 329-343;description=Beta tubulin; iprscan;InterPro:IPR013838 : Beta tubulin, autoregulation binding site;Prosite:PS00228; score=1.0;query 1-4;description=Beta tubulin, autoregulation binding site; iprscan;InterPro:IPR003008 : Tubulin/FtsZ, GTPase;SMART:SM00864; score=1.4E-71;query 47-244;description=Tubulin/FtsZ, GTPase domain; iprscan;InterPro:IPR00…
codon start: 1
product: tubulin beta chain, putative
translation: MREIVHVQAGQCGNQIGAKFWEVISDEHGIDPSGTYRGDSDLQLERVDVFYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDAVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTACAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPHNTKSSVCDIPPKGLKMAVTFVGNSTAIQEMFKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEEGDVEA
SIO_010081: PCHAS_1207600
subclass of: SO_0000673
so part of: PCHAS_1207600
location: complement(join(266936..267224,267405..268357,268983..269078))
location: region:266936-269078:-1
so has part: feature:268983-269078:-1:exon
so has part: feature:267405-268357:-1:exon
so has part: feature:266936-267224:-1:exon

XP_016654178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268983-269078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267405-268357:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266936-267224:-1:exon

PCHAS_1207700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1207700
old locus tag: PCHAS_120770
so part of: sequence
location: complement(<271373..>272782)
location: region:271373-272782:-1
so has part: feature:271373-272782:-1:exon
subclass of: SO_0000010

3494894
type: Gene
SIO_000068: ncbigene

position:271373:-1
position: 271373
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:272782:-1
position: 272782
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271373-272782:-1:exon

PCHAS_1207700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1207700
old locus tag: PCHAS_120770
product: nucleolar protein 5, putative
transcript id: XM_736717.2
SIO_010081: PCHAS_1207700
subclass of: SO_0000673
so part of: PCHAS_1207700
location: complement(<271373..>272782)
location: region:271373-272782:-1
so has part: feature:271373-272782:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271373-272782:-1:exon

PCHAS_1207700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1207700
old locus tag: PCHAS_120770
note: term=annotation;date=20130105;qualifier=added_gene_ name=nop5;qualifier=removed_product=small subunit rrna processing protein, putative;qualifier=added_product=nucleolar protein 5, putative;curatorName=ucb@sanger.ac.uk; ;query 432-432;GPI_cleavage_site_score=0.55099994; pfam_scan;Pfam:PF01798.14; E()=1.4E-80;score=270.0;query 171-399;description=Nop; pfam_scan;Pfam:PF08156.9; E()=3.3E-15;score=56.0;query 2-66;description=NOP5NT; iprscan;InterPro:IPR036070 : Nop domain superfamily;Superfamily:SSF89124; score=2.62E-86;query 158-401;description=Nop domain superfamily; iprscan;InterPro:IPR012976 : NOSIC;SMART:SM00931; score=5.6E-31;query 164-216;description=NOSIC; iprscan;InterPro:IPR002687 : Pre-mRNA processing ribonucleoprotein, binding region;Pfam:PF01798; score=1.4E-80;query 171-399;description=Nop domain; iprscan;InterPro:IPR002687 : Pre-mRNA processing ribonucleoprotein, binding region;Prosite:PS51358; score=34.952;query 285-403;description=Nop domain; iprscan;InterPro:IPR012974 : NOP5, N-terminal;Pfam:PF08156; score=3.8E-15;query 2-66;description=NOP5, N-terminal
codon start: 1
product: nucleolar protein 5, putative
translation: MLILVETAAGYGLFKVENSKLIESDASDIAKYFETAEEGKKNVSLYSFKKFKKFQTAFDDINKLTESKLGKVLKKFIKKNIVKPKLDETLAICDKTLGGLIKKKYDINVAYTNSTQEIIRGIKTHLYSFLVGVQEEDSKLLKLSLSHSLNRFKLKFSADKVDLMIIQAVGLLEDLDKEINVFSMRLKEWYGWHFPELGKVVSDNKIYAKCVKIIGFRNNAKNVNLLEETTEEIQKEIKQLAEISMGTEIEEDDLNCINELADRLLELTDYRESLATYLKFRMHSIAPNLTYLVGDLIGAKLIARAGSLISLAKHPSSTLQILGSEKALFRALKTKSKTPKYGLIYHATLVGQSSAKAKGRISRSLAAKLSLCSRVDALGNFAEPSIGITCKTYLEKRLEHITTSLQNKLNNANNSKGQTNMQQGKYNPNQFNSMQNNKNNNSFNKKRDFLFKREADKNNKKFIKKQKRK
SIO_010081: PCHAS_1207700
subclass of: SO_0000673
so part of: PCHAS_1207700
location: complement(271373..272782)
location: region:271373-272782:-1
so has part: feature:271373-272782:-1:exon

XP_741810.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271373-272782:-1:exon

PCHAS_1207800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1207800
old locus tag: PCHAS_120780
so part of: sequence
location: <274493..>275809
location: region:274493-275809:1
so has part: feature:274493-275809:1:exon
subclass of: SO_0000010

3496120
type: Gene
SIO_000068: ncbigene

position:274493:1
position: 274493
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:275809:1
position: 275809
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274493-275809:1:exon

PCHAS_1207800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1207800
old locus tag: PCHAS_120780
product: Plasmodium exported protein, unknown function
transcript id: XM_016798811.1
SIO_010081: PCHAS_1207800
subclass of: SO_0000673
so part of: PCHAS_1207800
location: join(<274493..274576,274763..>275809)
location: region:274493-275809:1
so has part: feature:274493-274576:1:exon
so has part: feature:274763-275809:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:274493-274576:1:exon

position:274576:1
position: 274576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274763-275809:1:exon

position:274763:1
position: 274763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1207800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1207800
old locus tag: PCHAS_120780
note: term=annotation;date=20171003;qualifier=added_GO:00 43657;qualifier=added_literature=pmid:15591202;curatorName =ucb@sanger.ac.uk; ;query 339-339;GPI_cleavage_site_score=0.46799996
codon start: 1
product: Plasmodium exported protein, unknown function
translation: MGVIKHRIFMVLKIINIILVLSSTQIPLNNNRVYNFQKITEPSSFKYPTRILCCASIANKIIKVCKEICCGLMEDDDNNEYYGKPRHSNKTQHDNKTKHDNKTQHDNESEYDDEDILDELSDYDDLSDDDEETKRDRKAKRPPRKKHGLRLKYFGRPLPEDELIIGRENQSDENWDGTHKSKLNPKYNTAGDIDLKLINSKKITKALIPFRITDEDIEKSEPDLLMHMVITDQIRITPKVASLIFYNIQMQIHKDMLILWKRAKQLINKLVIKHNISHERHTLRAFDLKNMFYSGCLHIRQTSLRLYQEYAITHRNSLDSTFLFFLREHHMEVCNFFFDASREFYSIITKAFGDVDMEGIVLVPEDEKELFFSPII
SIO_010081: PCHAS_1207800
subclass of: SO_0000673
so part of: PCHAS_1207800
location: join(274493..274576,274763..275809)
location: region:274493-275809:1
so has part: feature:274493-274576:1:exon
so has part: feature:274763-275809:1:exon

XP_016654179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274493-274576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274763-275809:1:exon

PCHAS_1207900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1207900
old locus tag: PCHAS_120790
so part of: sequence
location: complement(<276654..>277680)
location: region:276654-277680:-1
so has part: feature:276654-277680:-1:exon
subclass of: SO_0000010

3491765
type: Gene
SIO_000068: ncbigene

position:276654:-1
position: 276654
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:277680:-1
position: 277680
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276654-277680:-1:exon

PCHAS_1207900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1207900
old locus tag: PCHAS_120790
product: adenylate kinase, putative
transcript id: XM_016798812.1
SIO_010081: PCHAS_1207900
subclass of: SO_0000673
so part of: PCHAS_1207900
location: complement(join(<276654..277259,277558..>277680))
location: region:276654-277680:-1
so has part: feature:277558-277680:-1:exon
so has part: feature:276654-277259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277558-277680:-1:exon

position:277558:-1
position: 277558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:276654-277259:-1:exon

position:277259:-1
position: 277259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1207900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1207900
old locus tag: PCHAS_120790
note: term=annotation;date=20110524;qualifier=added_gene_ name=AK1;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF05191.10; E()=2.2E-12;score=46.6;query 155-190;description=ADK_lid; pfam_scan;Pfam:PF00406.18; E()=6.0E-53;score=178.9;query 34-218;description=ADK; iprscan;InterPro:IPR000850 : Adenylate kinase;PRINTS:PR00094; score=4.9E-30;query 205-219;description=Adenylate kinase/UMP-CMP kinase; iprscan;InterPro:IPR000850 : Adenylate kinase;PRINTS:PR00094; score=4.9E-30;query 32-45;description=Adenylate kinase/UMP-CMP kinase; iprscan;InterPro:IPR000850 : Adenylate kinase;PRINTS:PR00094; score=4.9E-30;query 188-203;description=Adenylate kinase/UMP-CMP kinase; iprscan;InterPro:IPR000850 : Adenylate kinase;PRINTS:PR00094; score=4.9E-30;query 109-125;description=Adenylate kinase/UMP-CMP kinase; iprscan;InterPro:IPR000850 : Adenylate kinase;PRINTS:PR00094; score=4.9E-30;query 60-74;description=Adenylate kinase/UMP-CMP kinase; iprscan;InterPro:IPR036193 : Adenylate kinase, active site lid domain superfamily;Superfamily:SSF57774; score=3.66E-11;query 154-191;description=Adenylate kinase, active site lid domain superfamily; iprscan;InterPro:IPR007862 : Adenylate kinase, lid region;Pfam:PF05191; score=1.9E-12;query 155-190;description=Adenylate kinase, active site lid domain; iprscan;InterPro:IPR033690 : Adenylate kinase, conserved site;Prosite:PS00113; score=1.0;query 109-120;description=Adenylate kinase, conserved site; iprscan;InterPro:IPR006259 : Adenylate kinase, subfamily;TIGR_TIGRFAMS:TIGR01351; score=1.0E-71;query 31-239;description=Adenylate kinase subfamily; iprscan;Pfam:PF00406; score=3.3E-53;query 34-218;description=null; iprscan;InterPro:IPR027417 : P-loop containing nucleoside triphosphate hydrolase;Superfamily:SSF52540; score=1.93E-32;query 31-240;description=P-loop containing nucleoside triphosphate hydrolase
codon start: 1
product: adenylate kinase, putative
translation: MNESLDKLSTIDLLNELKRRYACLSKPDGRYVFIGAPGSGKGTQSLNLKNSHCYCHLSTGDLLREAAEKQNELGNKIRGIINEGKLVDNEIVLSLVDDKLKSPQCKKGFILDGYPRNVKQAEDLNKLLDKNKMKLNGVFYFNVPDEVLVERICGRLIHKPSGRIYHKTLNPPKTPFRDDITNEPLTQRDDDNEAVLKKRLGVFKNETTPLINYYKNKNLLVSLDATKPAADIEKNISQHIGG
SIO_010081: PCHAS_1207900
subclass of: SO_0000673
so part of: PCHAS_1207900
location: complement(join(276654..277259,277558..277680))
location: region:276654-277680:-1
so has part: feature:277558-277680:-1:exon
so has part: feature:276654-277259:-1:exon

XP_016654180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277558-277680:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276654-277259:-1:exon

PCHAS_1208000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1208000
old locus tag: PCHAS_120800
so part of: sequence
location: <278671..>279495
location: region:278671-279495:1
so has part: feature:278671-279495:1:exon
subclass of: SO_0000010

3494722
type: Gene
SIO_000068: ncbigene

position:278671:1
position: 278671
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:279495:1
position: 279495
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278671-279495:1:exon

PCHAS_1208000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1208000
old locus tag: PCHAS_120800
product: diphthine methyl ester synthase, putative
transcript id: XM_736546.1
SIO_010081: PCHAS_1208000
subclass of: SO_0000673
so part of: PCHAS_1208000
location: <278671..>279495
location: region:278671-279495:1
so has part: feature:278671-279495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278671-279495:1:exon

PCHAS_1208000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1208000
old locus tag: PCHAS_120800
note: term=annotation;date=20151005;qualifier=added_gene_ name=DPH5;qualifier=removed_product=diphthine synthase, putative;qualifier=added_product=diphthine methyl ester synthase, putative;qualifier=removed_ec_number=2.1.1.98;qualifier=ad ded_ec_number=2.1.1.314;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF00590.16; E()=1.5E-22;score=80.5;query 3-236;description=TP_methylase; iprscan;InterPro:IPR000878 : Tetrapyrrole methylase;Pfam:PF00590; score=8.5E-23;query 3-236;description=Tetrapyrrole methylase; iprscan;InterPro:IPR035996 : Tetrapyrrole methylase superfamily;Superfamily:SSF53790; score=1.27E-60;query 1-269;description=Tetrapyrrole methylase superfamily; iprscan;InterPro:IPR004551 : Diphthine synthase;PIRSF:PIRSF036432; score=1.5E-104;query 2-274;description=Diphthine synthase; iprscan;InterPro:IPR004551 : Diphthine synthase;TIGR_TIGRFAMS:TIGR00522; score=9.6E-88;query 3-265;description=Diphthine synthase
codon start: 1
product: diphthine methyl ester synthase, putative
translation: MVLYIIGLGLGDEKDISVKGKELIDQSDVVYLESYTSILFISKDKLEDYYKKKIYEVDRNFAEENCEQILDEAINKKVSFLVVGDPLCATTHHDIILRAKKKNIDVQVIHNASIMSAIGESGMQLYNFGQTISIPYFEGDYKPTSYYNKIKINLDNNFHTLCLLDIKVKERTIENIMKNKNIYEPPKFMTVNEAIEQLIYCETVHNQNVITKNTLAIAIVRIGSKDQQIVSGNIFTLKTQKYNDPLHSLIICAPNLHDIEKEYFDMYSVNETPI
SIO_010081: PCHAS_1208000
subclass of: SO_0000673
so part of: PCHAS_1208000
location: 278671..279495
location: region:278671-279495:1
so has part: feature:278671-279495:1:exon

XP_741639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278671-279495:1:exon

PCHAS_1208100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1208100
old locus tag: PCHAS_120810
so part of: sequence
location: <280023..>281201
location: region:280023-281201:1
so has part: feature:280023-281201:1:exon
subclass of: SO_0000010

3488897
type: Gene
SIO_000068: ncbigene

position:280023:1
position: 280023
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:281201:1
position: 281201
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280023-281201:1:exon

PCHAS_1208100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1208100
old locus tag: PCHAS_120810
product: conserved Plasmodium protein, unknown function
transcript id: XM_730805.2
SIO_010081: PCHAS_1208100
subclass of: SO_0000673
so part of: PCHAS_1208100
location: <280023..>281201
location: region:280023-281201:1
so has part: feature:280023-281201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280023-281201:1:exon

PCHAS_1208100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1208100
old locus tag: PCHAS_120810
note: tmhmm; query 1-393; ;query 28-235; ;query 324-392; ;query 5-27; ;query 236-258; ;query 301-323; ;query 1-4; ;query 259-300
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MINLRSTLFLVANIFFLFSYSFSCLYIEDTIKIKINNIRTGDFIKVCCDDFCSFLDYDVNKKTYLFIKKNNIILYKCKYILKVYNSRNYIFYFTNYIFLKNENSIIEFGDSFENEKGNFTFWKPTFELMNIKNKYVYIPNGYYEIKKASNNCIGVNQWNEKNKSITSFMQIIKDIILEIKKGNFTFFDKIYNQNAQHTSSILPNCNKEKATTYNGPTFPMMATGKTKKIHMAFYEIYYLLIDTIFYKPSILIISYISPLWNSIFKIYSTSLNAYLYNNDSNHYGYWGEAEKDNCNKFLKIYFNNISKNGTIIILLIALIIFILKRKIWGPKTKQNSKTQSSRGNQNILAEIHVEYKNKVQTNFGSKIKDITDEDLINLIAHNKAETIIVCQP
SIO_010081: PCHAS_1208100
subclass of: SO_0000673
so part of: PCHAS_1208100
location: 280023..281201
location: region:280023-281201:1
so has part: feature:280023-281201:1:exon

XP_735898.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280023-281201:1:exon

PCHAS_1208200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1208200
old locus tag: PCHAS_120820
so part of: sequence
location: <282061..>284547
location: region:282061-284547:1
so has part: feature:282061-284547:1:exon
subclass of: SO_0000010

3491227
type: Gene
SIO_000068: ncbigene

position:282061:1
position: 282061
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:284547:1
position: 284547
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282061-284547:1:exon

PCHAS_1208200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1208200
old locus tag: PCHAS_120820
product: ribonuclease, putative
transcript id: XM_733100.2
SIO_010081: PCHAS_1208200
subclass of: SO_0000673
so part of: PCHAS_1208200
location: <282061..>284547
location: region:282061-284547:1
so has part: feature:282061-284547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282061-284547:1:exon

PCHAS_1208200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1208200
old locus tag: PCHAS_120820
note: term=annotation;date=20181130;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=ribonuclease, putative;curatorName=ucb@sanger.ac.uk; ;query 793-793;GPI_cleavage_site_score=0.22039998; iprscan;InterPro:IPR036866 : Ribonuclease Z/Hydroxyacylglutathione hydrolase-like;Superfamily:SSF56281; score=7.06E-60;query 12-620;description=Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
codon start: 1
product: ribonuclease, putative
translation: MCDSFEVTKLFDNEHVSSHLIKLGSFNILCDVPLNPEEILNFKRKRTASSNNKEKKKKEKIDNEKKNINITNLESYSTSNKLLLDISVLPIKIHIILISCSECMIGLPILCRYFDLTDTQIICTKPTYTFSINAVKNLQEKENYMPFEDGHTTIFDIFNNDPAIDYAKSEHDLNEKNFNKKEYFDMKIKLKNSLHLLSYKEKISFKQNDETISISLYSSGYSLGSSNFFIEFDYTTIFIINKSSYNIKRYPSLFDSSCLPIADFVLFTSYLDSDKKYLVTPKEKGSKNETETKNNFDPQNATLNSQPNESNQSAKNNESNNSKQIYNDFNNCQETKENINDKISNKINFCFEKTYKDSINKICSIVLKTIKKKGCVLIPVDLCYLYFLELVELIGVIISKYLTKDEQVLIFSVMPNINNIIHQADLCAEWVEESKKKKCSQISNPQGPFSIDIMIKNNRLIVENSINDISKSFRYPCVCFIQDSTLRFSEANILLEKWGMDQNNSIILLDPYYDPISVLYPYKIYEKNINVYYCPLYWDLNEMNILHIISTNKNKKCVYLLSHRLEKTFLKAQANNSNDGSSNPKIPENSIENVYNTEIALLLKNNIIFIHSLEKKKIIYNNFLRLKKKMQPICFTSDGEKNLENVLTMIENNFYGTQTQCAYTSTLFGDYIKEEDIQKLREHSEIDGKMINNTMDISYTQEDDKIDSLNSNNSKSKDSQIPLMFGAIDQKEFTNLLVQNGYSLNDLKIDESHNLNDIINSDKIEYDQDTKHYDKSGISEPNYIWRIFIKSINSTITCYTKYDIEVFTKDEKLRDQVKDILQSLSIKL
SIO_010081: PCHAS_1208200
subclass of: SO_0000673
so part of: PCHAS_1208200
location: 282061..284547
location: region:282061-284547:1
so has part: feature:282061-284547:1:exon

XP_738193.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282061-284547:1:exon

PCHAS_1208300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1208300
old locus tag: PCHAS_120830
so part of: sequence
location: complement(<285055..>286821)
location: region:285055-286821:-1
so has part: feature:285055-286821:-1:exon
subclass of: SO_0000010

3490013
type: Gene
SIO_000068: ncbigene

position:285055:-1
position: 285055
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:286821:-1
position: 286821
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285055-286821:-1:exon

PCHAS_1208300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1208300
old locus tag: PCHAS_120830
product: conserved Plasmodium protein, unknown function
transcript id: XM_731909.2
SIO_010081: PCHAS_1208300
subclass of: SO_0000673
so part of: PCHAS_1208300
location: complement(<285055..>286821)
location: region:285055-286821:-1
so has part: feature:285055-286821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285055-286821:-1:exon

PCHAS_1208300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1208300
old locus tag: PCHAS_120830
note: pfam_scan;Pfam:PF00501.24; E()=6.8E-7;score=28.1;query 365-526;description=AMP-binding; iprscan;Superfamily:SSF56801; score=6.41E-10;query 396-528;description=null; iprscan;InterPro:IPR000873 : AMP-dependent synthetase and ligase;Pfam:PF00501; score=7.9E-7;query 397-526;description=AMP-dependent synthetase/ligase
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MRVILFRKLGIARRMFGTIQNILNEPFNIYTNNHIVTSTHFSKEVYVMNDKLLYYIKDYFKLNYCLNIVNNNHNKTRIGCLFPPCYSQLIFKFCILLNNFDYVSIPTPIYKSKQIKQRYSFYIAENNIDLILCHPFYKHYIEEIAYNLQLPYLICYDKPDIITPHEYLEDLQEGKENFAHNLFHNLEKSNDLIKEWTTNIEGNENAMPNSDKNFEQSSNLKSEIKTEKDKNDNYLHMQLSKENECDKSIKFKLSDILEQGKCIRNAIEFNEGNKNVLICLPANNIQYFDILFSMLNMNATIIYPEICKNKLLKNNYMEWFKNNMKSNKDNNFSIHDLMIKNDFTNSDFDFIDGPTLFEEIQNNEQKINIIICNNYLLRDFITFFENSQINNITKREFIQKKASHINTIIINGNEIMPGINKKYIDKIKDVFINAKIYQRYIIQEIGTVCILDYDQLDNENIHYDRKLAGYILPNISIKIDKETNLMKIKSDNIFSEYYNNNKITENSFDQDGFFKTKYLASINEGNSLLKIEGIHNSLENLPDEYYLYYKQRRDKMEKHPPGYLKRVKLQGKIWGNFHANKKNWKRKF
SIO_010081: PCHAS_1208300
subclass of: SO_0000673
so part of: PCHAS_1208300
location: complement(285055..286821)
location: region:285055-286821:-1
so has part: feature:285055-286821:-1:exon

XP_737002.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285055-286821:-1:exon

PCHAS_1208400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1208400
old locus tag: PCHAS_120840
so part of: sequence
location: <288357..>289361
location: region:288357-289361:1
so has part: feature:288357-289361:1:exon
subclass of: SO_0000010

3494903
type: Gene
SIO_000068: ncbigene

position:288357:1
position: 288357
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:289361:1
position: 289361
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288357-289361:1:exon

PCHAS_1208400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1208400
old locus tag: PCHAS_120840
product: zinc finger protein, putative
transcript id: XM_736726.1
SIO_010081: PCHAS_1208400
subclass of: SO_0000673
so part of: PCHAS_1208400
location: <288357..>289361
location: region:288357-289361:1
so has part: feature:288357-289361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288357-289361:1:exon

PCHAS_1208400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1208400
old locus tag: PCHAS_120840
note: term=annotation;date=20160708;qualifier=added_gene_ name=ZNF2;qualifier=added_literature=pmid:27385072;qualifi er=added_GO:0044822;qualifier=added_GO:0005634;curatorName =ucb@sanger.ac.uk; ;query 319-319;GPI_cleavage_site_score=0.684; iprscan;InterPro:IPR013087 : Zinc finger C2H2-type;SMART:SM00355; score=4.8;query 14-37;description=Zinc finger C2H2-type; iprscan;InterPro:IPR013087 : Zinc finger C2H2-type;Prosite:PS00028; score=1.0;query 40-61;description=Zinc finger C2H2-type; iprscan;InterPro:IPR013087 : Zinc finger C2H2-type;SMART:SM00355; score=0.05;query 38-61;description=Zinc finger C2H2-type; iprscan;InterPro:IPR013087 : Zinc finger C2H2-type;Prosite:PS50157; score=9.224;query 38-61;description=Zinc finger C2H2-type; iprscan;InterPro:IPR036236 : Zinc finger C2H2 superfamily;Superfamily:SSF57667; score=1.03E-5;query 15-61;description=Zinc finger C2H2 superfamily
codon start: 1
product: zinc finger protein, putative
translation: MGRKKRKINIELKPFCYYCDREFDDEKVLIQHQKAKHFKCSQCNRKLDVASGLVVHMMQVHKTNLKTVPNSLPKRNDPEIVIRGMEGVPAEIIEENLNKLKQKLGDKNIKRQQRVNWAQVTMAPTMEQFLQQAQMGNFYFPGFNSPHIPPTNNMMLNNNFDLKKNMPYMPMYPPGSNSNAPIIQPPPIGSNMYPNMHTQMPSQHPIGYPGNLSSQNMNTSQKYPPNINFPTLPFLPKLPPNAFPSMDSTFMPQNISPPPLPPSAPPSGPPILPPSAPGMPPVPPHLAQNAGNNSSGNIPDQANDDKAEDTNPSKESPNNASNNDNTNEDDEENE
SIO_010081: PCHAS_1208400
subclass of: SO_0000673
so part of: PCHAS_1208400
location: 288357..289361
location: region:288357-289361:1
so has part: feature:288357-289361:1:exon

XP_741819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288357-289361:1:exon

PCHAS_1208500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1208500
old locus tag: PCHAS_120850
so part of: sequence
location: complement(<289808..>291226)
location: region:289808-291226:-1
so has part: feature:289808-291226:-1:exon
subclass of: SO_0000010

3498363
type: Gene
SIO_000068: ncbigene

position:289808:-1
position: 289808
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:291226:-1
position: 291226
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289808-291226:-1:exon

PCHAS_1208500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1208500
old locus tag: PCHAS_120850
product: metalloprotease, putative
transcript id: XM_016798813.1
SIO_010081: PCHAS_1208500
subclass of: SO_0000673
so part of: PCHAS_1208500
location: complement(join(<289808..290647,290846..290950,291113..>291226))
location: region:289808-291226:-1
so has part: feature:291113-291226:-1:exon
so has part: feature:290846-290950:-1:exon
so has part: feature:289808-290647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291113-291226:-1:exon

position:291113:-1
position: 291113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:290846-290950:-1:exon

position:290846:-1
position: 290846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290950:-1
position: 290950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:289808-290647:-1:exon

position:290647:-1
position: 290647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1208500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1208500
old locus tag: PCHAS_120850
note: pfam_scan;Pfam:PF08325.6; E()=6.3E-39;score=133.8;query 13-198;description=WLM; iprscan;InterPro:IPR013536 : WLM;Prosite:PS51397; score=29.646;query 4-199;description=WLM domain; iprscan;InterPro:IPR013536 : WLM;Pfam:PF08325; score=6.8E-43;query 13-198;description=WLM domain
codon start: 1
product: metalloprotease, putative
translation: MSVKNLDDIRYKIHRVQALNDNDEKAKAILNKAAEKVQPIMKKRRFLVGLLSEFLPKNPNLLGLNIIGKSEIKIRLRKKPGGEIFHFNDIMGTLLHELVHLVHRRHDKKFYALLDKLVFEYNELYIYNNINNSYGDNKNKSLANNIDENSDSYKNNASSKNNLIILIDDDFKINNHKKSSLCYSQPKHMAAQAAERRLINNFINNDGEIINISLESCLTEKQRENLIKRKKEYDDKTCLVNNDVIIIDSMSTIPKNNKRKKLTELENSNYKKNNGDNNFCNNNDCLEIISSNQPNTKNKKTLKSCSKNLDITTPECISIISDNITHIKSQKNIVEYILDDNTNTDINSTSRQ
SIO_010081: PCHAS_1208500
subclass of: SO_0000673
so part of: PCHAS_1208500
location: complement(join(289808..290647,290846..290950,291113..291226))
location: region:289808-291226:-1
so has part: feature:291113-291226:-1:exon
so has part: feature:290846-290950:-1:exon
so has part: feature:289808-290647:-1:exon

XP_016654181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291113-291226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290846-290950:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:289808-290647:-1:exon

PCHAS_1208600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1208600
old locus tag: PCHAS_120860
so part of: sequence
location: <293061..>294281
location: region:293061-294281:1
so has part: feature:293061-294281:1:exon
subclass of: SO_0000010

3498362
type: Gene
SIO_000068: ncbigene

position:293061:1
position: 293061
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:294281:1
position: 294281
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293061-294281:1:exon

PCHAS_1208600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1208600
old locus tag: PCHAS_120860
product: protein phosphatase PPM10, putative
transcript id: XM_740147.2
SIO_010081: PCHAS_1208600
subclass of: SO_0000673
so part of: PCHAS_1208600
location: <293061..>294281
location: region:293061-294281:1
so has part: feature:293061-294281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293061-294281:1:exon

PCHAS_1208600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1208600
old locus tag: PCHAS_120860
note: term=annotation;date=20170614;qualifier=removed_pro duct=protein phosphatase, putative;qualifier=added_product=protein phosphatase ppm10, putative;qualifier=added_gene_name=ppm10;qualifier=added_l iterature=pmid:28556455;curatorName=ucb@sanger.ac.uk; ;query 381-381;GPI_cleavage_site_score=1.72; iprscan;InterPro:IPR036457 : PPM-type phosphatase domain superfamily;Superfamily:SSF81606; score=3.14E-7;query 216-405;description=PPM-type phosphatase domain superfamily
codon start: 1
product: protein phosphatase PPM10, putative
translation: MAKSILPKLIFYTATVSSFSLIYINNVKELSYNFIDKINSYHNWTKGNEYGARWNNLSVYSNEIKNQVLTNTKEKYELEHLGRVLADTKQYVHASGKRGSHKYIRDYDTASTTEDDNISIVSSNAGFTSCIRNILGSFYKKKKHKKRGSPIPTLVPHIVSYQMDKNKIEPTPDSQPYSINCTIRKFPDADKTNGHCIKGENYMVLARGGFSDNHPVVSRDYVRHFLTLFKNFVSRNKEIKSKDAIEYAYENSYYKGEISLCAIVMNDDNTISASIIGNQQYRIIRDGKIVHKGQDPKNSYGTFHTIGTNKNIDTSDVMNEVVPVEKDDIIISGSNIIWGTLDDDQILAIASSIDFSMLSKAIARSTYIYAIEELRNTSYTSGSIGFINEKCLGVKDDISVACARIN
SIO_010081: PCHAS_1208600
subclass of: SO_0000673
so part of: PCHAS_1208600
location: 293061..294281
location: region:293061-294281:1
so has part: feature:293061-294281:1:exon

XP_745240.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293061-294281:1:exon

PCHAS_1208700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1208700
old locus tag: PCHAS_120870
so part of: sequence
location: complement(<294749..>296350)
location: region:294749-296350:-1
so has part: feature:294749-296350:-1:exon
subclass of: SO_0000010

3498361
type: Gene
SIO_000068: ncbigene

position:294749:-1
position: 294749
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:296350:-1
position: 296350
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294749-296350:-1:exon

PCHAS_1208700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1208700
old locus tag: PCHAS_120870
product: tubulin--tyrosine ligase, putative
transcript id: XM_016798814.1
SIO_010081: PCHAS_1208700
subclass of: SO_0000673
so part of: PCHAS_1208700
location: complement(<294749..>296350)
location: region:294749-296350:-1
so has part: feature:294749-296350:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294749-296350:-1:exon

PCHAS_1208700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1208700
old locus tag: PCHAS_120870
note: query 510-510;GPI_cleavage_site_score=0.172; pfam_scan;Pfam:PF03133.11; E()=2.4E-77;score=259.8;query 74-361;description=TTL; iprscan;InterPro:IPR004344 : Tubulin-tyrosine ligase;Pfam:PF03133; score=2.5E-77;query 74-361;description=Tubulin-tyrosine ligase/Tubulin polyglutamylase; iprscan;InterPro:IPR004344 : Tubulin-tyrosine ligase;Prosite:PS51221; score=50.795;query 21-373;description=Tubulin-tyrosine ligase/Tubulin polyglutamylase; iprscan;Superfamily:SSF56059; score=2.79E-20;query 99-355;description=null
codon start: 1
product: tubulin--tyrosine ligase, putative
translation: MKEYYLHNDQNNHKCISRRNKHLHKIHLANTRYDIIRRVVNESDDWTESCPDSNDWDVMWIDTSISDDRFRKLHKFQKINHFIGMKGITRKDELCKNLKRIKKHFPHSYNFFPPTWILPNDNFDFKNYFKKKKSSSKTYIVKLKNSCQGKGIYLTKSLDNINKYESCVIQKYIHKPLLINNLKFDIRLYVLVTGCDPLRIFLHEDGLVRFSIEKYKLPKSKNLKEVNMHLTNFSINKKSDKFENSLNPNDATMGHKRSWKTFLAKLKEEGLPMESIMKKIENIIVKTICSIQPELKHYYNASHISDYSNSMCFEILGFDILLDYKLKPWLLEVNHSPSFSTCSLVDEQVKYAVIRDTLNLLYMNSKYRHMHIQEYLNIQKFRKKHSHLLINNKTEFKKKLALSHFIYENKHLGGYKRIYPLEELLDYENFVLFVSNAWNKSIGLPYITKTGSFEYLFEDQKRKKKGKNQKEKLKLIENPTQNQDIIHTPRQIKYDNGYLIKTNMNISNCSTSCYEEPGTVYDVDACKAFQFQS
SIO_010081: PCHAS_1208700
subclass of: SO_0000673
so part of: PCHAS_1208700
location: complement(294749..296350)
location: region:294749-296350:-1
so has part: feature:294749-296350:-1:exon

XP_016654182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294749-296350:-1:exon

PCHAS_1208800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1208800
old locus tag: PCHAS_120880
so part of: sequence
location: complement(<297985..>301846)
location: region:297985-301846:-1
so has part: feature:297985-301846:-1:exon
subclass of: SO_0000010

27794949
type: Gene
SIO_000068: ncbigene

position:297985:-1
position: 297985
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:301846:-1
position: 301846
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297985-301846:-1:exon

PCHAS_1208800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1208800
old locus tag: PCHAS_120880
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798815.1
SIO_010081: PCHAS_1208800
subclass of: SO_0000673
so part of: PCHAS_1208800
location: complement(join(<297985..298075,298344..>301846))
location: region:297985-301846:-1
so has part: feature:298344-301846:-1:exon
so has part: feature:297985-298075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:298344-301846:-1:exon

position:298344:-1
position: 298344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297985-298075:-1:exon

position:298075:-1
position: 298075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1208800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1208800
old locus tag: PCHAS_120880
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MNDKKRKVPDTIGNHLCDVEKNDINKEENIKNLKKLLNNYTNNNDLDDLSDYLASTYKDFLINSIYEELKCSDNHILGELMSICLDIIEKNHKNFKHQNVYFVCLNTLFLLLNRVGSINNYIEYNSFKIFYDLIINDNDWSNNKNSIEIFAKLNYVNLFILSNTFLKCKKNNDFNKSVPIQEINKIVKHVFSNSILFENSIANQNYKGNSLNETKGCIHNNTYINKYFDFMSSYKTRVLDNATAIIHMTNENNKNECIPNQGNEISILYKKIKTENCYKELENNNMISSYINSQYKNSNYVNGTNKMIIIKSHIFPTTKNACDIIDNPEDDLFLQIFIKIIHLIINTELTIYIIYECVHIILNTCEIHKQELLLFDLLLLSKFYIRNDNDKMRRFIIFYMHLIIKSKQQYKKLFFMKLVKNVNPFFYLLYVDNPDISIYAKEFISSLDFFNTNNTNIFLDNIKKADKNVDINICAQIEIIRIMNVIVFLLDNIYNISMNKYVDDEFLKIEYDNFYKNCIWHDPLFKNYIYYQMSVKKNKLFFKCKNPEDKNIKIRNIIIEIENMIKTFDYLFKFVTNREWWNISLLFFFIHSFDMIKKICRNLPSKDFKKFFFLTKNLFMQAIYVLENFSKIGNLQLCNYENMLTVIENVYTKHDIYKMVLFDQTETKKLIEQIKLKTKEKNSKPILILLEDLYLVIIDFLFPKDEEQLKKKTEESNHQKGIESFFNQNNFSFLKTLLLRISYSYYYIWSQFYNIKNADIDKKNIKLSKLSFFEIFYNRIKDKLKLELDLKKMKKEDIFLQNLWLKYSKICENYLCVKKSRYISPDIANYFTFCFDFFKILIMYENESDYVSNRNRINKIILNMCKITILKYQYFLPARNIGNCFSSSIEFLYHLYINIYNSKKSTKLMNQISFLIFLCCNKAMNDIEKDHVTFYSNCFENGKMESIPYDTSEKCVASTPNSNNINKSHIIIKNKFQKHFNEYYLNTSLHVFITCLNALTDTIKITISKLGTHKESIVIKNSKITSRKKKEKKYKFLKYKDGLILFNYTYLSNLCKCLIKNGHKYFFYSSRKYVLNFIQHFISMSTIMILKYKFKNNLNLKKILKFCFYNISTDCDISILTIIHRIAFSIKNHLKYCGTKIKKAHHYFRRCDDLISLIVQESHTYNMPETNLWEEYISQDTCFDSLKNTIHVDCPGD
SIO_010081: PCHAS_1208800
subclass of: SO_0000673
so part of: PCHAS_1208800
location: complement(join(297985..298075,298344..301846))
location: region:297985-301846:-1
so has part: feature:298344-301846:-1:exon
so has part: feature:297985-298075:-1:exon

XP_016654183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298344-301846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297985-298075:-1:exon

PCHAS_1208900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1208900
old locus tag: PCHAS_120890
so part of: sequence
location: complement(<303048..>311527)
location: region:303048-311527:-1
so has part: feature:303048-311527:-1:exon
subclass of: SO_0000010

3495517
type: Gene
SIO_000068: ncbigene

position:303048:-1
position: 303048
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:311527:-1
position: 311527
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303048-311527:-1:exon

PCHAS_1208900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1208900
old locus tag: PCHAS_120890
product: kinesin-4, putative
transcript id: XM_016798816.1
SIO_010081: PCHAS_1208900
subclass of: SO_0000673
so part of: PCHAS_1208900
location: complement(join(<303048..303144,303332..303457,303594..>311527))
location: region:303048-311527:-1
so has part: feature:303594-311527:-1:exon
so has part: feature:303332-303457:-1:exon
so has part: feature:303048-303144:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:303594-311527:-1:exon

position:303594:-1
position: 303594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:303332-303457:-1:exon

position:303332:-1
position: 303332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303457:-1
position: 303457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:303048-303144:-1:exon

position:303144:-1
position: 303144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1208900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1208900
old locus tag: PCHAS_120890
note: term=annotation;date=20140417;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=kinesin-4, putative;qualifier=added_literature=pmid:24737313;curatorN ame=ucb@sanger.ac.uk; ;query 2689-2689;GPI_cleavage_site_score=0.172; pfam_scan;Pfam:PF00225.19; E()=3.3E-55;score=187.2;query 161-421;description=Kinesin; pfam_scan;Pfam:PF00225.19; E()=2.4E-41;score=141.6;query 476-588;description=Kinesin; iprscan;InterPro:IPR036322 : WD40-repeat-containing domain superfamily;Superfamily:SSF50978; score=3.3E-7;query 2240-2361;description=WD40-repeat-containing domain superfamily; iprscan;InterPro:IPR036322 : WD40-repeat-containing domain superfamily;Superfamily:SSF50978; score=5.76E-16;query 2461-2715;description=WD40-repeat-containing domain superfamily; iprscan;InterPro:IPR001752 : Kinesin, motor region;PRINTS:PR00380; score=1.1E-30;query 231-252;description=Kinesin motor domain; iprscan;InterPro:IPR001752 : Kinesin, motor region;Pfam:PF00225; score=2.1E-41;query 476-588;description=Kinesin motor domain; iprscan;InterPro:IPR001752 : Kinesin, motor region;PRINTS:PR00380; score=1.1E-30;query 538-559;description=Kinesin motor domain; iprscan;InterPro:IPR001752 : Kinesin, motor region;PRINTS:PR00380; score=1.1E-30;query 487-505;description=Kinesin motor domain; iprscan;InterPro:IPR001752 : Kinesin, motor region;Pfam:PF00225; score=2.5E-55;query 161-421;description=Kinesin motor domain; iprscan;InterPro:IPR001752 : Kinesin, motor region;Prosite:PS50067; score=95.543;query 155-588;description=Kinesin motor domain; iprscan;InterPro:IPR001752 : Kinesin, motor region;SMART:SM00129; score=1.2E-105;query 153-596;description=Kinesin motor domain; iprscan;InterPro:IPR027417 : P-loop containing nucleoside triphosphate hydrolase;Superfamily:SSF52540; score=3.23E-106;query 155-624;description=P-loop containing nucleoside triphosphate hydrolase; iprscan;InterPro:IPR019821 : Kinesin, motor region, conserved site;Prosite:PS00411; score=1.0;query 486-497…
codon start: 1
product: kinesin-4, putative
translation: MSEYLGDKDTNGNYEQNSQQTKKGDQSIFDIEPDKHEDLNFNGFLKGVNQVVENDPLLVNNNNNNNKIGIPNNEDVMQNKKRESENLHTLLSTEKDFESIFDNYSSSNDETNELNKINQYKNDDEICDVSDNNEEILSDQNNRDGEEETTFDKNNCQVVVRIRPKKKENKLCDDLTKNVNCNDVKNIKYNNNCICINNQKFLFDKVFKQEAQQEDVYSYLSDNFLDNLFDGYNCTIFAYGQTGSGKTYTMGFDYINKVTEHVGILPRFLNDIFNMIEKKQKTNNITFDTSCTYIEIYNEEIIDLIDSSEEDYDDKIGNRCNVSAINTVTNNKDLKINNKKKKKKREINKNISIREDINKKEIILMGVKTAKVSNVEDSFAILHKGNLLRTTERTFMNDKSSRSHAIFTINLIQRKNVTMENGPPNEVNTSADIENAKNIKTGNQKINNDINDSTNAPLNERIMTTSESNNGNKIEESEKKEEIICSKLHFVDLAGSERAKRTETKGNRLKEAININYGLLSLSNVIYGLSSKKKVQHIPYRNSKLTRILQDSLGGNSKTVMIACISVEPSDFYETFSTVKYAARTKKIKNNPIINYDMNNLIINDLRKQLFNLNLELKKYKVECKDKYNFNDDKKLKELSDQNCKLLKKIKNLNIKRKKLICLIFYYISLIRKNDYQPNSTTCLVKEAECCTSPKSANIEESKNDNPFNLNSIENSKIVCQDNYLDSTSCKKEDNNAVDHKNNQAELECVNGSAIKRVVSSTDDGAEKNEKGEVPIKLDKICGMCEKINIIENEETNDFDFSFLENKHLFLNLEKDKKCVEDIFRQYELNKFNEKKLNDLNKKYINIFEKNKGYEKKINELNKIIKKMKKGSKVKLNEKYNKAKGRKSAKGPESKIDYNFLFSKKNNDKKKVAKKKIKKSYNSSRHNIGEDVEKSVDSLNKLKSVYNLFCSDKIRKGYYSEIELEREVKNKIQRKKSEKEKRKCYTDTDISSSTKKNTTFVEYIMNYLSGNQNEKDWCFQVLREYKKRRRMLSKMDNKNCLEENDQDLVFSDLFFSSNNIYSDLLGPSEKFKKIFEKKNETNFNENYDYYDKNESQNNEDQIFGKFDSKFSKGHIEESLQQFKNCQTKMKEEQFSSSENDEDSEDESCRSMSSNSSGNSNVSPNFLKSKLNKLQKIIKQDICKIKQVNKEKKEYNTKNEILTNSIVDLKKKLQYLQINSNNNNKNCKNIESMKQNLTKITKEKEKIQKKLNENEQQIKHLKVDIMKMKNNFLKTSTLLKEEQKKHNNIIQKKENLITKLHEREEIYINKLKKKEEISKQAYSKLLKRNKELLDQLKQLKKKQNIHDKVEKNENKNVNLIQNAMNNNKAKLKKKEQAIEEKTDNLIDQSNLVSEINVDNISSIMIDEKVENEINMDTDVEYDTESDKNNLDPSGEWEISTINSILSDCVNSSCKNSDVSVLIKKRNSSLTQSINKIKDEEYVLQNILKNDIKKNKFLKDFLKKKNIKKKISPIKTKLEKEKFMNKNVAKILQALYVKRQNEGEDNEKNEIVDNQNEESINLVLDTKEKNKDTEKLLTNKFYEEKIDEDVLYYEEKLKESNENIKNLKRSLIKKKEEMMLQKVVKDLLKKLYSNYKKRKENEKKVNSLKKFIYSENLFISKIYNNFVFTNDLLLNNSTMPPPDQLLKKNNYFSQFYSKKLTNIENIKYDNNFKNPQSCEILKQGKNLLNSSFCEGTENITHFNPNNTSYLYKTNNLDNELLENPISKFKRRNTYSLYKEVCENSEPNNEINLKKRNNKSRLMENIYLGHCNKKRMILSSLTNPNIPNENNQKCLNNLHDTDKLNMEENNNHFVDPISDCIAYENDDNAQVELSDKQTINLINKKVDPKQSENFINYCENNIEGRQKLVEKNNYPGLKVLFDMPLNSYIKRKSIDNCYILYSGRNEEKDESCNEIMNNLGTQNLSQPISPSNEKEDTTYCEGANKESISLVENGDINKIKKNI…
SIO_010081: PCHAS_1208900
subclass of: SO_0000673
so part of: PCHAS_1208900
location: complement(join(303048..303144,303332..303457,303594..311527))
location: region:303048-311527:-1
so has part: feature:303594-311527:-1:exon
so has part: feature:303332-303457:-1:exon
so has part: feature:303048-303144:-1:exon

XP_016654184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303594-311527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303332-303457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303048-303144:-1:exon

PCHAS_1209000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1209000
old locus tag: PCHAS_120900
so part of: sequence
location: <313517..>315839
location: region:313517-315839:1
so has part: feature:313517-315839:1:exon
subclass of: SO_0000010

3497562
type: Gene
SIO_000068: ncbigene

position:313517:1
position: 313517
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:315839:1
position: 315839
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313517-315839:1:exon

PCHAS_1209000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1209000
old locus tag: PCHAS_120900
product: heptatricopeptide repeat-containing protein, putative
transcript id: XM_739355.1
SIO_010081: PCHAS_1209000
subclass of: SO_0000673
so part of: PCHAS_1209000
location: join(<313517..315604,315741..>315839)
location: region:313517-315839:1
so has part: feature:313517-315604:1:exon
so has part: feature:315741-315839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313517-315604:1:exon

position:315604:1
position: 315604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315741-315839:1:exon

position:315741:1
position: 315741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1209000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1209000
old locus tag: PCHAS_120900
note: term=annotation;date=20180521;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk; term=annotation;date=20180816;qualifier=removed_product=co nserved protein, unknown function;qualifier=added_product=heptatricopeptide repeat-containing protein, putative;qualifier=added_literature=pmid:30102371;curatorN ame=ucb@sanger.ac.uk; ;query 691-691;GPI_cleavage_site_score=0.124699995
codon start: 1
product: heptatricopeptide repeat-containing protein, putative
translation: MKSVLGRNRFRITYKYARLYNSTTTNEHTQIKNNNSIANSDNSIINYKMILGIKKIEISNLSSLCRDFHNIFRINKYGLLKYTNDILPFIKYLRTSEIVMILHHYAHINYNNINFYNNIWNQIIDKLYDIDCKELALIIYSMGKIKYLNNKDMILLFESEIKKWVTKLSGRDCSLILKGLNNLNYNNNNIYSIIYDRILSIADNLNLLDICIILNTHSKSKNININMFEILLNKSLSFYSFLNEQCIASLLWSLSNASIKSEKYFSLLALKLRLLMHKKLIQNCEIDQGKTASHDLQNGDIKGDGTRDQSKINEPNYGKILERDSQGEITNDNNSYQMKNNNDTFFENYNDVISESQSYDNEDNEDKQDGDNLKNLNYEISMSSSCKYENLIPSIIYSFGKQRTYLKNNINIDKKLYNHIINSYNAQNCINSSPVDTVYIFDTSKDFLRDKNVFNNNDKNRAKLKKYQNKKYYEHIIFIINNYLTYFINNVHYNDLKNVLFGIAKIEMFVDKKLLNTIFELITDHVKNNLYKSYEIINLSRSLSLLPHVPTNIWIDIFEFYKNKFVSNTSVKNNCYLFYIFSFIKKKLNDYNLDLCLIENINKKIASIDEDDVINLIKALINFNYYNNELVNNISNYIEKNYTAFNLIDIVYILKYFTSMDLRNTNIFSLFALTIKKNNTKHNYPIISTISSFYLQMNIFPKAIEDILLQEKKSRDVCFKTEEIICDE
SIO_010081: PCHAS_1209000
subclass of: SO_0000673
so part of: PCHAS_1209000
location: join(313517..315604,315741..315839)
location: region:313517-315839:1
so has part: feature:313517-315604:1:exon
so has part: feature:315741-315839:1:exon

XP_744448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313517-315604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315741-315839:1:exon

PCHAS_1209100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1209100
old locus tag: PCHAS_120910
so part of: sequence
location: complement(<315936..>316702)
location: region:315936-316702:-1
so has part: feature:315936-316702:-1:exon
subclass of: SO_0000010

3485791
type: Gene
SIO_000068: ncbigene

position:315936:-1
position: 315936
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:316702:-1
position: 316702
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315936-316702:-1:exon

PCHAS_1209100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1209100
old locus tag: PCHAS_120910
product: ribosomal protein L43, mitochondrial, putative
transcript id: XM_727751.2
SIO_010081: PCHAS_1209100
subclass of: SO_0000673
so part of: PCHAS_1209100
location: complement(join(<315936..316241,316367..>316702))
location: region:315936-316702:-1
so has part: feature:316367-316702:-1:exon
so has part: feature:315936-316241:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:316367-316702:-1:exon

position:316367:-1
position: 316367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315936-316241:-1:exon

position:316241:-1
position: 316241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1209100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1209100
old locus tag: PCHAS_120910
note: term=annotation;date=20121121;qualifier=removed_pro duct=mitochondrial ribosomal protein L22/L43, putative;qualifier=added_product=ribosomal protein l43, mitochondrial, putative;qualifier=eupathdb_uc=46053;curatorName=ucb@sange r.ac.uk; ;query 185-185;GPI_cleavage_site_score=0.22619997; pfam_scan;Pfam:PF05047.12; E()=2.8E-6;score=27.0;query 26-74;description=L51_S25_CI-B8; iprscan;InterPro:IPR007741 : Mitochondrial ribosome;Pfam:PF05047; score=2.4E-6;query 26-74;description=Ribosomal protein/NADH dehydrogenase domain; iprscan;InterPro:IPR007741 : Mitochondrial ribosome;SMART:SM00916; score=2.3E-15;query 18-91;description=Ribosomal protein/NADH dehydrogenase domain; iprscan;InterPro:IPR036249 : Thioredoxin-like superfamily;Superfamily:SSF52833; score=2.06E-12;query 8-91;description=Thioredoxin-like superfamily
codon start: 1
product: ribosomal protein L43, mitochondrial, putative
translation: MCSNGVYQLKKILLRYSETGHSSRNVRFFLRFILPDYKEENKHLNFEIHHEQYEEPLATFEYINNSRYEISLKDIKSKHIVDIINLYKDSAGNTDFLKHGGPKVYSNRRTIQGLWCPSIYSELNAISYLKKKKKNNIKLPKYTRESLNLNHDVIKGNGRWGNENLFPKGFDQKYLKNIFCFPFEDSLPKKREGEYTDDTKEPHINSFYKFYKA
SIO_010081: PCHAS_1209100
subclass of: SO_0000673
so part of: PCHAS_1209100
location: complement(join(315936..316241,316367..316702))
location: region:315936-316702:-1
so has part: feature:316367-316702:-1:exon
so has part: feature:315936-316241:-1:exon

XP_732844.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316367-316702:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315936-316241:-1:exon

PCHAS_1209200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1209200
old locus tag: PCHAS_120920
so part of: sequence
location: <317694..>318554
location: region:317694-318554:1
so has part: feature:317694-318554:1:exon
subclass of: SO_0000010

27794950
type: Gene
SIO_000068: ncbigene

position:317694:1
position: 317694
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:318554:1
position: 318554
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317694-318554:1:exon

PCHAS_1209200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1209200
old locus tag: PCHAS_120920
product: PI31 domain-containing protein, putative
transcript id: XM_016798817.1
SIO_010081: PCHAS_1209200
subclass of: SO_0000673
so part of: PCHAS_1209200
location: <317694..>318554
location: region:317694-318554:1
so has part: feature:317694-318554:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317694-318554:1:exon

PCHAS_1209200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1209200
old locus tag: PCHAS_120920
note: term=annotation;date=20170818;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=pi31 domain-containing protein, putative;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF11566.4; E()=8.0E-23;score=80.9;query 18-179;description=PI31_Prot_N; iprscan;InterPro:IPR021625 : Fbxo7/PI31 domain;Pfam:PF11566; score=2.7E-23;query 18-179;description=PI31 proteasome regulator, N-terminal
codon start: 1
product: PI31 domain-containing protein, putative
translation: MEECETFKELIQLFGDLKREDAFVLFIHGFILDNDFTYKLNKEKECKYNEDKNIQISNGYIKYTPDSTSNKFFISKLLIDPEWKNNSNNYNFLYTNKKSNENATYNLNILKIENSLVIQIINVEKPSNVHSITINMDEYINENNKECVTNKEKINLNIPKLIKLCQTHILFNMQNNDNKQKKKINSLIIETNGHKNNMNNSNLSEQSRVFQNFNDDHFDDKNPIIRQNLIPDFKNGNHILKPDGLFVGPNNKFFNPQNLRYDPIGPFGNEPNADINPFEFQNNFPF
SIO_010081: PCHAS_1209200
subclass of: SO_0000673
so part of: PCHAS_1209200
location: 317694..318554
location: region:317694-318554:1
so has part: feature:317694-318554:1:exon

XP_016654185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317694-318554:1:exon

PCHAS_1209300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1209300
old locus tag: PCHAS_120930
so part of: sequence
location: complement(<319211..>324055)
location: region:319211-324055:-1
so has part: feature:319211-324055:-1:exon
subclass of: SO_0000010

3496505
type: Gene
SIO_000068: ncbigene

position:319211:-1
position: 319211
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:324055:-1
position: 324055
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319211-324055:-1:exon

PCHAS_1209300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1209300
old locus tag: PCHAS_120930
product: DNA2/NAM7 helicase, putative
transcript id: XM_738310.2
SIO_010081: PCHAS_1209300
subclass of: SO_0000673
so part of: PCHAS_1209300
location: complement(<319211..>324055)
location: region:319211-324055:-1
so has part: feature:319211-324055:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319211-324055:-1:exon

PCHAS_1209300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1209300
old locus tag: PCHAS_120930
note: term=annotation;date=20110408;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=dna2/nam7 helicase, putative;curatorName=ucb@sanger.ac.uk; ;query 1594-1594;GPI_cleavage_site_score=0.5814; pfam_scan;Pfam:PF13087.2; E()=7.6E-55;score=185.5;query 993-1313;description=AAA_12; pfam_scan;Pfam:PF13086.2; E()=9.8E-27;score=94.2;query 909-985;description=AAA_11; pfam_scan;Pfam:PF13086.2; E()=2.7E-10;score=40.3;query 576-624;description=AAA_11; pfam_scan;Pfam:PF13086.2; E()=2.8E-10;score=40.3;query 832-895;description=AAA_11; iprscan;Pfam:PF13086; score=2.5E-26;query 908-985;description=null; iprscan;Pfam:PF13086; score=4.8E-10;query 576-624;description=null; iprscan;Pfam:PF13087; score=4.4E-55;query 993-1313;description=null; iprscan;Pfam:PF13086; score=4.0E-10;query 832-895;description=null; iprscan;InterPro:IPR027417 : P-loop containing nucleoside triphosphate hydrolase;Superfamily:SSF52540; score=2.1E-41;query 834-1315;description=P-loop containing nucleoside triphosphate hydrolase; iprscan;InterPro:IPR027417 : P-loop containing nucleoside triphosphate hydrolase;Superfamily:SSF52540; score=2.3E-9;query 571-623;description=P-loop containing nucleoside triphosphate hydrolase
codon start: 1
product: DNA2/NAM7 helicase, putative
translation: MLCEKMWERWDDEYFIKVFFNWDIFLKYAEDNEFHELEENIKNENIDLNKDEHENKTSDEVLLILQSYIIEKKNTYIDVSDYLVNIILRWNYYTSLRSENNLNICSVKNRLKIDININTLPSVYKSFEEYFYSYFPLFLIETQQLINNKKENESLKEFNINIIHDLKEMYNYEFHISIPFDELVFSNIFYGDLILLRFVPKKTEKHDLVFTSTHSSLKKKDDNPTDTQVENDIDNLEECSSNETDDEENEILSNKSLEKCKSVEDKEETGTMAGGEKKENGDGSNVENAIQTIKKEEMNDKNNGNIYMVRKYCVRHLLGFVVGKNKEKIKIKFNLNFRNFDIIDKVRKCIIYDIFNKDQLNNYSLRISKVTNLISTLRQFNYLFNFRNSSIISEIIETQEGERRGSKKGTHTDTDENVEKSNHILSSNNLMTIKKRKCEDVTNEYTNEESGKIVKIKKTELSQIEVSKKRNNNLVEEDKELDQELVEEMELKEKIRNHLSREKILQYNFDEIKNEKVEENRVENFDKFETFETFEKFEKFEKFENFKMDELGNVNDQFEGFCYIPTLLKNKFFNIYNNCQLRAINNSILNDGVTLIQGPPGTGKTTTILGIISALIFYQKVEENKIENTDLVRKTNMDIKQTDEDDNNEDELGWIVTSDKRETQKSPYGWINYDKKNDYCYFNENCFDALEYDDFFDNYPENRQMNKTSTFYFNKNNKKEYKNAYAIHLSIMNASSQVLNFGTNGDTNENENTNEEDKHKNNENRIKNLISLAETFHNSYVNNKDYTGTNLNTIEKDSKPNEKSSYPFYVSDRNRKFSKLSVEDDKKKMNVKKTKQIKNKKILVCAPSNAAIDEILRRLVSSDSGILDEDGNLFNPIVTRIGGNVSSDLLEFSLEFKEQLFLYLNKKDDNKIYKQNLLKTSTIICSTLSSSSNISLTNYINYFDAIIIDEASQAIELDILIPLSFSCKKIILVGDPKQLSATVFSLFAKKHNYSRSLFERLQKIYKFNKSKYNLLSIQYRMHPDISHFPNKHYYKNKIQDANYFLFVLLKELEIKKYTKQLLVDDDEKKKNMKYILTDLNLSKFIENQFGNLPPNFNDILLCQKNEENFHWFFIPLLQHCVFYDISFSKQKKIKNSYINIHESEIVLQFLEFLHYIFTSENVKEWYKKIGIITPYAAEKYFLKKALKVFFEKKGYKNNVSNFIDIGTVDGFQGTEKDIIIFVCVRTSGVFKRNEKKNKNNLTIENELANSSNNDMPINETKLEDNVESQSVYEQTESEGDEQMDDSNPFFSNYKRLNVALTRARYNLFIFGNCSFLNKCDAWSQIIEHYKINKKIIKIKKKKYLKKMKILSEDINEDHIFDNKNEIINKKIENSFYNKNIIDYNFIPINENENETFNLKDFINSFDKNSGKQNDLENNAYNEGDVNSKPNDKNGYLLEDNIKTYKEFDEKEINDFFKELYNDNFDKEDSISLQEKDEEQFDDENVVNDNGFKERKETFTNDLQMNIYNNEKKNVITRSSTVNNDLEQADTNPVVNNITENNSVINNNSNGEDNVANLKNDDKGLLNVTQDRNNILHIKNNNYFIDTLNNFCKKNAGLLFAVNCILPKFSNTFLH
SIO_010081: PCHAS_1209300
subclass of: SO_0000673
so part of: PCHAS_1209300
location: complement(319211..324055)
location: region:319211-324055:-1
so has part: feature:319211-324055:-1:exon

XP_743403.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319211-324055:-1:exon

PCHAS_1209400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1209400
old locus tag: PCHAS_120940
so part of: sequence
location: <326679..>327477
location: region:326679-327477:1
so has part: feature:326679-327477:1:exon
subclass of: SO_0000010

3491767
type: Gene
SIO_000068: ncbigene

position:326679:1
position: 326679
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:327477:1
position: 327477
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326679-327477:1:exon

PCHAS_1209400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1209400
old locus tag: PCHAS_120940
product: succinate dehydrogenase subunit 4, putative
transcript id: XM_016798819.1
SIO_010081: PCHAS_1209400
subclass of: SO_0000673
so part of: PCHAS_1209400
location: join(<326679..326950,327176..327237,327458..>327477)
location: region:326679-327477:1
so has part: feature:326679-326950:1:exon
so has part: feature:327176-327237:1:exon
so has part: feature:327458-327477:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326679-326950:1:exon

position:326950:1
position: 326950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:327176-327237:1:exon

position:327176:1
position: 327176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327237:1
position: 327237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327458-327477:1:exon

position:327458:1
position: 327458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1209400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1209400
old locus tag: PCHAS_120940
note: term=annotation;date=20110528;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=succinate dehydrogenase subunit 4, putative;qualifier=added_gene_name=sdh4;qualifier=added_li terature=pmid:19682605;curatorName=ucb@sanger.ac.uk; ;query 1-37; ;query 95-117; ;query 38-57; ;query 72-94; ;query 58-71; tmhmm; query 1-118
codon start: 1
product: succinate dehydrogenase subunit 4, putative
translation: MKLKLNIIKKKKGLGESISDGFKSLSNKIFGTGVDKYFQAINGAIILLFVTVLYYIHKFKSSTSRYKNMKILYMYYGFLVCLTGLTISINWMYYEHIKNKKKNRISSLDVKMAYKKK
SIO_010081: PCHAS_1209400
subclass of: SO_0000673
so part of: PCHAS_1209400
location: join(326679..326950,327176..327237,327458..327477)
location: region:326679-327477:1
so has part: feature:326679-326950:1:exon
so has part: feature:327176-327237:1:exon
so has part: feature:327458-327477:1:exon

XP_016654186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326679-326950:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327176-327237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327458-327477:1:exon

PCHAS_1209500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1209500
old locus tag: PCHAS_120950
so part of: sequence
location: complement(<327494..>329372)
location: region:327494-329372:-1
so has part: feature:327494-329372:-1:exon
subclass of: SO_0000010

3493536
type: Gene
SIO_000068: ncbigene

position:327494:-1
position: 327494
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:329372:-1
position: 329372
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327494-329372:-1:exon

PCHAS_1209500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1209500
old locus tag: PCHAS_120950
product: MORN repeat protein, putative
transcript id: XM_016798820.1
SIO_010081: PCHAS_1209500
subclass of: SO_0000673
so part of: PCHAS_1209500
location: complement(join(<327494..327598,327885..327991,328078..328167,328273..328395,328495..329043,329195..>329372))
location: region:327494-329372:-1
so has part: feature:329195-329372:-1:exon
so has part: feature:328495-329043:-1:exon
so has part: feature:328273-328395:-1:exon
so has part: feature:328078-328167:-1:exon
so has part: feature:327885-327991:-1:exon
so has part: feature:327494-327598:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329195-329372:-1:exon

position:329195:-1
position: 329195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328495-329043:-1:exon

position:328495:-1
position: 328495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329043:-1
position: 329043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:328273-328395:-1:exon

position:328273:-1
position: 328273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328395:-1
position: 328395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:328078-328167:-1:exon

position:328078:-1
position: 328078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328167:-1
position: 328167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:327885-327991:-1:exon

position:327885:-1
position: 327885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327991:-1
position: 327991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:327494-327598:-1:exon

position:327598:-1
position: 327598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1209500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1209500
old locus tag: PCHAS_120950
note: term=structural;date=20110203;qualifier=method_exon =changed gene model, added exon 6 based on RNAseq;curatorName=ucb@sanger.ac.uk; term=annotation;date=20180504;qualifier=removed_product=co nserved Plasmodium protein, unknown function;qualifier=added_product=morn repeat protein, putative;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF02493.16; E()=0.0015;score=18.1;query 70-90;description=MORN; pfam_scan;Pfam:PF02493.16; E()=0.0083;score=15.8;query 47-68;description=MORN; pfam_scan;Pfam:PF02493.16; E()=12.0;score=5.8;query 317-338;description=MORN; pfam_scan;Pfam:PF02493.16; E()=8.9E-4;score=18.9;query 271-289;description=MORN; pfam_scan;Pfam:PF02493.16; E()=0.51;score=10.2;query248-270;description=MORN; iprscan;InterPro:IPR003409 : MORN motif;SMART:SM00698; score=0.0012;query 269-290;description=MORN motif; iprscan;InterPro:IPR003409 : MORN motif;SMART:SM00698; score=54.0;query 315-336;description=MORN motif; iprscan;InterPro:IPR003409 : MORN motif;SMART:SM00698; score=0.88;query 246-267;description=MORN motif; iprscan;InterPro:IPR003409 : MORN motif;SMART:SM00698; score=0.016;query 68-89;description=MORN motif; iprscan;InterPro:IPR003409 : MORN motif;Pfam:PF02493; score=0.5;query 248-270;description=MORN motif; iprscan;InterPro:IPR003409 : MORN motif;Pfam:PF02493; score=13.0;query 317-338;description=MORN motif; iprscan;InterPro:IPR003409 : MORN motif;Pfam:PF02493; score=9.1E-4;query 271-289;description=MORN motif; iprscan;InterPro:IPR003409 : MORN motif;Pfam:PF02493; score=0.0023;query 70-90;description=MORN motif; iprscan;InterPro:IPR003409 : MORN motif;Pfam:PF02493; score=0.0099;query 47-68;description=MORN motif; iprscan;InterPro:IPR003409 : MORN motif;SMART:SM00698; score=0.15;query 45-66;description=MORN motif; iprscan;Superfamily:SSF82185; score=5.62E-11;query 44-96;description=null; iprscan;Superfamily:SSF82185; score=6.28E-20;query 244-350;description=null
codon start: 1
product: MORN repeat protein, putative
translation: MAKNKNKKSKLKLFKDDGIPSTSLKNYTGIGTVIFYPCKNYKTQEKYYGNFLLGKKHGYGEYEYLNGDLYQGSFEHNKKNGIGTYFFNNYTNKKKGNKKIRETSQSSNNEESENESNESMSEGSKSKSSENLDNKEEEESEESESEGSESKGSKSEDEKSKSEESKSEESKSEESENGESENEGSENGESENEGSENEGSKSKKDSEKERNKKKKKLSEKLLSLMQDSNKLKTKKEITCNTKEGKSYYYGNYSNGMKHDEGLMVYKNGDVYVGTWRFGKKNGYGKYIYKKCKSVLEGHWENGYLSHGKWILPNGTYFIGNFKNNEPIGDGVWYFKDGAQLNVHYYKDEKKYKKKNEQTNKKTSDLDVCLNCKPLYITYTRSSF
SIO_010081: PCHAS_1209500
subclass of: SO_0000673
so part of: PCHAS_1209500
location: complement(join(327494..327598,327885..327991,328078..328167,328273..328395,328495..329043,329195..329372))
location: region:327494-329372:-1
so has part: feature:329195-329372:-1:exon
so has part: feature:328495-329043:-1:exon
so has part: feature:328273-328395:-1:exon
so has part: feature:328078-328167:-1:exon
so has part: feature:327885-327991:-1:exon
so has part: feature:327494-327598:-1:exon

XP_016654187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329195-329372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328495-329043:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328273-328395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:328078-328167:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:327885-327991:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327494-327598:-1:exon

PCHAS_1209600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1209600
old locus tag: PCHAS_120960
so part of: sequence
location: <329780..>331413
location: region:329780-331413:1
so has part: feature:329780-331413:1:exon
subclass of: SO_0000010

3489193
type: Gene
SIO_000068: ncbigene

position:329780:1
position: 329780
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:331413:1
position: 331413
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329780-331413:1:exon

PCHAS_1209600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1209600
old locus tag: PCHAS_120960
product: ankyrin-repeat protein, putative
transcript id: XM_016798821.1
SIO_010081: PCHAS_1209600
subclass of: SO_0000673
so part of: PCHAS_1209600
location: join(<329780..329788,329879..329915,330075..330142,330368..330565,330672..330719,330936..330986,331128..331200,331349..>331413)
location: region:329780-331413:1
so has part: feature:329780-329788:1:exon
so has part: feature:329879-329915:1:exon
so has part: feature:330075-330142:1:exon
so has part: feature:330368-330565:1:exon
so has part: feature:330672-330719:1:exon
so has part: feature:330936-330986:1:exon
so has part: feature:331128-331200:1:exon
so has part: feature:331349-331413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329780-329788:1:exon

position:329788:1
position: 329788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:329879-329915:1:exon

position:329879:1
position: 329879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329915:1
position: 329915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:330075-330142:1:exon

position:330075:1
position: 330075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330142:1
position: 330142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:330368-330565:1:exon

position:330368:1
position: 330368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330565:1
position: 330565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:330672-330719:1:exon

position:330672:1
position: 330672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330719:1
position: 330719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:330936-330986:1:exon

position:330936:1
position: 330936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330986:1
position: 330986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:331128-331200:1:exon

position:331128:1
position: 331128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331200:1
position: 331200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:331349-331413:1:exon

position:331349:1
position: 331349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1209600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1209600
old locus tag: PCHAS_120960
note: term=annotation;date=20161118;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=ankyrin-repeat protein, putative;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF13606.2; E()=3.7E-4;score=20.7;query 105-133;description=Ank_3; pfam_scan;Pfam:PF13637.2; E()=1.0E-12;score=48.3;query 40-93;description=Ank_4; iprscan;InterPro:IPR002110 : Ankyrin;SMART:SM00248; score=2.6E-7;query 72-101;description=Ankyrin repeat; iprscan;InterPro:IPR002110 : Ankyrin;Prosite:PS50088; score=9.858;query 39-71;description=Ankyrin repeat; iprscan;InterPro:IPR002110 : Ankyrin;SMART:SM00248; score=4.7E-4;query 39-68;description=Ankyrin repeat; iprscan;InterPro:IPR002110 : Ankyrin;PRINTS:PR01415; score=3.9E-6;query 73-88;description=Ankyrin repeat; iprscan;InterPro:IPR002110 : Ankyrin;SMART:SM00248; score=1.3E-4;query 105-134;description=Ankyrin repeat; iprscan;InterPro:IPR002110 : Ankyrin;Prosite:PS50088; score=14.292;query 72-104;description=Ankyrin repeat; iprscan;InterPro:IPR002110 : Ankyrin;Prosite:PS50088; score=12.93;query 105-137;description=Ankyrin repeat; iprscan;InterPro:IPR002110 : Ankyrin;PRINTS:PR01415; score=3.9E-6;query 121-135;description=Ankyrin repeat; iprscan;InterPro:IPR020683 : Ankyrin repeat-containing domain;Pfam:PF12796; score=4.2E-17;query 63-136;description=Ankyrin repeat-containing domain; iprscan;InterPro:IPR020683 : Ankyrin repeat-containing domain;Prosite:PS50297; score=36.445;query 39-170;description=Ankyrin repeat-containing domain; iprscan;InterPro:IPR036770 : Ankyrin repeat-containing domain superfamily;Superfamily:SSF48403; score=3.26E-38;query 9-157;description=Ankyrin repeat-containing domain superfamily
codon start: 1
product: ankyrin-repeat protein, putative
translation: MATEERIKLLVAAKKGVYEDVVILSKLQIPLGDYVQPPHNRTAFWYSCRNGNLKIARIILKKGSNINHKDANGISPLHICVKYGHLNIAKFLIENNANINIMDNEGQSPIFYAIINKHYEIAKLLIENGANVQIKDNNNATVYDYADFMGRTKLSSYILYKSNELIVKNANYLTNEDKETCE
SIO_010081: PCHAS_1209600
subclass of: SO_0000673
so part of: PCHAS_1209600
location: join(329780..329788,329879..329915,330075..330142,330368..330565,330672..330719,330936..330986,331128..331200,331349..331413)
location: region:329780-331413:1
so has part: feature:329780-329788:1:exon
so has part: feature:329879-329915:1:exon
so has part: feature:330075-330142:1:exon
so has part: feature:330368-330565:1:exon
so has part: feature:330672-330719:1:exon
so has part: feature:330936-330986:1:exon
so has part: feature:331128-331200:1:exon
so has part: feature:331349-331413:1:exon

XP_016654188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329780-329788:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329879-329915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330075-330142:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330368-330565:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330672-330719:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330936-330986:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331128-331200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:331349-331413:1:exon

PCHAS_1209700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1209700
old locus tag: PCHAS_120970
so part of: sequence
location: complement(<332137..>333218)
location: region:332137-333218:-1
so has part: feature:332137-333218:-1:exon
subclass of: SO_0000010

27794951
type: Gene
SIO_000068: ncbigene

position:332137:-1
position: 332137
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:333218:-1
position: 333218
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332137-333218:-1:exon

PCHAS_1209700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1209700
old locus tag: PCHAS_120970
product: eukaryotic translation initiation factor 2 subunit beta, putative
transcript id: XM_016798822.1
SIO_010081: PCHAS_1209700
subclass of: SO_0000673
so part of: PCHAS_1209700
location: complement(join(<332137..332212,332308..>333218))
location: region:332137-333218:-1
so has part: feature:332308-333218:-1:exon
so has part: feature:332137-332212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332308-333218:-1:exon

position:332308:-1
position: 332308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:332137-332212:-1:exon

position:332212:-1
position: 332212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1209700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1209700
old locus tag: PCHAS_120970
note: term=annotation;date=20151008;qualifier=removed_pro duct=eukaryotic translation initiation factor 2 beta subunit, putative;qualifier=added_product=eukaryotic translation initiation factor 2 subunit beta, putative;qualifier=added_GO:0001731;qualifier=added_GO:000 3729;qualifier=added_GO:0005850;qualifier=added_GO:0001731 ;curatorName=ucb@sanger.ac.uk; term=annotation;date=20160616;qualifier=added_GO:0005737;q ualifier=added_GO:0005634;qualifier=added_literature=pmid: 27303372;curatorName=ucb@sanger.ac.uk; ;query 300-300;GPI_cleavage_site_score=0.24000001; pfam_scan;Pfam:PF02389.11; E()=2.0E-5;score=24.6;query 5-117;description=Cornifin; pfam_scan;Pfam:PF01873.13; E()=1.8E-35;score=121.2;query 193-303;description=eIF-5_eIF-2B; iprscan;InterPro:IPR016189 : Translation initiation factor IF2/IF5, N-terminal;Superfamily:SSF100966; score=1.44E-26;query 169-274;description=Translation initiation factor IF2/IF5, N-terminal; iprscan;InterPro:IPR016190 : Translation initiation factor IF2/IF5, zinc-binding;Superfamily:SSF75689; score=6.28E-9;query 271-308;description=Translation initiation factor IF2/IF5, zinc-binding; iprscan;InterPro:IPR002735 : Translation initiation factor IF2/IF5;SMART:SM00653; score=3.0E-44;query 192-303;description=Translation initiation factor IF2/IF5; iprscan;InterPro:IPR002735 : Translation initiation factor IF2/IF5;Pfam:PF01873; score=1.6E-35;query 193-303;description=Translation initiation factor IF2/IF5
codon start: 1
product: eukaryotic translation initiation factor 2 subunit beta, putative
translation: MEEKIEEQIEEKVEEKVEEQVEEKVEEQVEEKVEENVEEKVEENVEEKVEENVEEKAEEKVEEKAEEKVEEHVEEKVEEKAEEKVEEKAEEKVEEKAEEKAEEKAEEIVDEKVEDASKPFIDIDKVNDEAAQLFDFGEKKKKKKKKEVVNKVEVIIDGTGKVFEKGAVYPYEELLHRIQDLVNKHNIDLCISKKYTIKPPQVVRVGSKKVAWINFKDICTIMNRNEEHVFHFVLAELGTEGSIAGEGQLVLKGKYGPKHIEALLRKYITEYVTCQMCKSPNTAMEKDSRTRLFHQHCNACGAKRSVTTIKSGFHALGRGERRKAKHTN
SIO_010081: PCHAS_1209700
subclass of: SO_0000673
so part of: PCHAS_1209700
location: complement(join(332137..332212,332308..333218))
location: region:332137-333218:-1
so has part: feature:332308-333218:-1:exon
so has part: feature:332137-332212:-1:exon

XP_016654189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332308-333218:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:332137-332212:-1:exon

PCHAS_1209800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1209800
old locus tag: PCHAS_120980
so part of: sequence
location: <334798..>336282
location: region:334798-336282:1
so has part: feature:334798-336282:1:exon
subclass of: SO_0000010

3495102
type: Gene
SIO_000068: ncbigene

position:334798:1
position: 334798
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:336282:1
position: 336282
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334798-336282:1:exon

PCHAS_1209800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1209800
old locus tag: PCHAS_120980
product: dolichyl-phosphate-mannose--protein mannosyltransferase, putative
transcript id: XM_016798823.1
SIO_010081: PCHAS_1209800
subclass of: SO_0000673
so part of: PCHAS_1209800
location: join(<334798..334922,335036..335087,335362..335422,335518..335639,335773..335918,336021..336126,336214..>336282)
location: region:334798-336282:1
so has part: feature:334798-334922:1:exon
so has part: feature:335036-335087:1:exon
so has part: feature:335362-335422:1:exon
so has part: feature:335518-335639:1:exon
so has part: feature:335773-335918:1:exon
so has part: feature:336021-336126:1:exon
so has part: feature:336214-336282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:334798-334922:1:exon

position:334922:1
position: 334922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335036-335087:1:exon

position:335036:1
position: 335036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335087:1
position: 335087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:335362-335422:1:exon

position:335362:1
position: 335362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335422:1
position: 335422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:335518-335639:1:exon

position:335518:1
position: 335518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335639:1
position: 335639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:335773-335918:1:exon

position:335773:1
position: 335773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335918:1
position: 335918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:336021-336126:1:exon

position:336021:1
position: 336021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336126:1
position: 336126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:336214-336282:1:exon

position:336214:1
position: 336214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1209800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1209800
old locus tag: PCHAS_120980
note: term=annotation;date=20110414;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=dolichyl-phosphate- mannoseprotein mannosyltransferase, putative;curatorName=ucb@sanger.ac.uk; ;query 1-6; ;query 7-29; ;query 30-226; tmhmm; query 1-227; iprscan;InterPro:IPR036300 : Mir domain superfamily;Superfamily:SSF82109; score=3.27E-31;query 24-168;description=Mir domain superfamily; iprscan;InterPro:IPR016093 : MIR motif;Prosite:PS50919; score=8.333;query 86-150;description=MIR motif; iprscan;InterPro:IPR016093 : MIR motif;Prosite:PS50919; score=5.813;query 23-78;description=MIR motif
codon start: 1
product: dolichyl-phosphate-mannose--protein mannosyltransferase, putative
translation: MIYNPHFVGIFFLVSFFFKVYNCLYVTDGSAIILENTGTKYKLFSTDMKWGTGSGNQIVTTITTDKNEESLLWIVNVYEEGKSGIGNKIKCDEIVTLKHVKSNGYLIGSQHYSILSNNYELSVDSDNTFGKFQVVCESKKNDSYWMLNETVYLKSLNQNGYLSTSKKYEFNQYNCHNCPILYHLETCITKSSYQLNDYKWVAKSGVIISAFGEDKSNKYNDDDDEL
SIO_010081: PCHAS_1209800
subclass of: SO_0000673
so part of: PCHAS_1209800
location: join(334798..334922,335036..335087,335362..335422,335518..335639,335773..335918,336021..336126,336214..336282)
location: region:334798-336282:1
so has part: feature:334798-334922:1:exon
so has part: feature:335036-335087:1:exon
so has part: feature:335362-335422:1:exon
so has part: feature:335518-335639:1:exon
so has part: feature:335773-335918:1:exon
so has part: feature:336021-336126:1:exon
so has part: feature:336214-336282:1:exon

XP_016654190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334798-334922:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335036-335087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335362-335422:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335518-335639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335773-335918:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336021-336126:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:336214-336282:1:exon

PCHAS_1209900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1209900
old locus tag: PCHAS_120990
so part of: sequence
location: complement(<336550..>337416)
location: region:336550-337416:-1
so has part: feature:336550-337416:-1:exon
subclass of: SO_0000010

3495101
type: Gene
SIO_000068: ncbigene

position:336550:-1
position: 336550
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:337416:-1
position: 337416
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336550-337416:-1:exon

PCHAS_1209900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1209900
old locus tag: PCHAS_120990
product: 50S ribosomal protein L22, mitochondrial, putative
transcript id: XM_736921.2
SIO_010081: PCHAS_1209900
subclass of: SO_0000673
so part of: PCHAS_1209900
location: complement(<336550..>337416)
location: region:336550-337416:-1
so has part: feature:336550-337416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:336550-337416:-1:exon

PCHAS_1209900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1209900
old locus tag: PCHAS_120990
note: term=annotation;date=20121120;qualifier=removed_pro duct=ribosomal protein, putative;qualifier=added_product=50s ribosomal protein l22, mitochondrial, putative;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF00237.15; E()=1.9E-11;score=44.1;query 84-178;description=Ribosomal_L22; iprscan;InterPro:IPR036394 : Ribosomal protein L22/L17 superfamily;Superfamily:SSF54843; score=2.49E-20;query 70-186;description=Ribosomal protein L22/L17 superfamily; iprscan;InterPro:IPR001063 : Ribosomal protein L22/L17;Pfam:PF00237; score=1.5E-11;query 83-177;description=Ribosomal protein L22/L17
codon start: 1
product: 50S ribosomal protein L22, mitochondrial, putative
translation: MLGNIIKGVVNNINLIHKRNINTNVQLRNPYYRKKGFWEWRRRIIHRYNEKRYIRKGIKPKIYNEKEEKIKNHKDDIYWTFKVYQLKISLRNLNNFGRLIKGLHLEDAIIFLESIPQIRINNILNSLLNSKDKIINNFNGDISRLYIDNVQIHYNTPMKYIKYHALGHFGLVKSYRNTFTYTIKQMNIQEFYHKIFIRGNVPRSLSHNMRLYLNQNRINKDNLIEWYPYICANSRYYFREKLRYLNNIYQFNYYKSRNSWIQNYFRNIDRRKQELQMQRNEITQMLEK
SIO_010081: PCHAS_1209900
subclass of: SO_0000673
so part of: PCHAS_1209900
location: complement(336550..337416)
location: region:336550-337416:-1
so has part: feature:336550-337416:-1:exon

XP_742014.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336550-337416:-1:exon

PCHAS_1210000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1210000
old locus tag: PCHAS_121000
so part of: sequence
location: <338474..>340000
location: region:338474-340000:1
so has part: feature:338474-340000:1:exon
subclass of: SO_0000010

3485733
type: Gene
SIO_000068: ncbigene

position:338474:1
position: 338474
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:340000:1
position: 340000
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338474-340000:1:exon

PCHAS_1210000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1210000
old locus tag: PCHAS_121000
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798824.1
SIO_010081: PCHAS_1210000
subclass of: SO_0000673
so part of: PCHAS_1210000
location: join(<338474..338539,338648..339405,339549..339644,339770..339818,339938..>340000)
location: region:338474-340000:1
so has part: feature:338474-338539:1:exon
so has part: feature:338648-339405:1:exon
so has part: feature:339549-339644:1:exon
so has part: feature:339770-339818:1:exon
so has part: feature:339938-340000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338474-338539:1:exon

position:338539:1
position: 338539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:338648-339405:1:exon

position:338648:1
position: 338648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339405:1
position: 339405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:339549-339644:1:exon

position:339549:1
position: 339549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339644:1
position: 339644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:339770-339818:1:exon

position:339770:1
position: 339770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339818:1
position: 339818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:339938-340000:1:exon

position:339938:1
position: 339938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1210000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1210000
old locus tag: PCHAS_121000
note: query 306-306;GPI_cleavage_site_score=0.152
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MDLKSAGNVWDVLNDLYKNDKQSYDKFMKKHLNDMHDSVAIKPKFCFCICTNVEKVSIKTSINEYKEKLCDYFIYIYHTKKIKSSNLSSNFIENADNLNFDDIYISTSKVKGESSKDMYAEAVIHTNIYKNMNNINFKNKIITRILQIIYNSEKALRNDIIINTNSFRFIDLNYIPKTTHYLNPKYVDNNLLNKQTDTNIDETDIKFLNILNEKNKQNNNNKEQEKDQILLHDSSNDILKDIHPVKTVKNPQINKVDKAKIPKEVKSYQYTIIDRFLHIIMTFNNISYTNLETLKDGNTIYVYVSNNSDECMTLQFKENLSDNIKAYFNEALLKLTISIELLY
SIO_010081: PCHAS_1210000
subclass of: SO_0000673
so part of: PCHAS_1210000
location: join(338474..338539,338648..339405,339549..339644,339770..339818,339938..340000)
location: region:338474-340000:1
so has part: feature:338474-338539:1:exon
so has part: feature:338648-339405:1:exon
so has part: feature:339549-339644:1:exon
so has part: feature:339770-339818:1:exon
so has part: feature:339938-340000:1:exon

XP_016654191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338474-338539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338648-339405:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:339549-339644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339770-339818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:339938-340000:1:exon

PCHAS_1210100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1210100
old locus tag: PCHAS_121010
so part of: sequence
location: complement(<340831..>341829)
location: region:340831-341829:-1
so has part: feature:340831-341829:-1:exon
subclass of: SO_0000010

27794952
type: Gene
SIO_000068: ncbigene

position:340831:-1
position: 340831
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:341829:-1
position: 341829
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340831-341829:-1:exon

PCHAS_1210100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1210100
old locus tag: PCHAS_121010
product: inner membrane complex sub-compartment protein 1, putative
transcript id: XM_016798825.1
SIO_010081: PCHAS_1210100
subclass of: SO_0000673
so part of: PCHAS_1210100
location: complement(join(<340831..341040,341211..341285,341474..341547,341757..>341829))
location: region:340831-341829:-1
so has part: feature:341757-341829:-1:exon
so has part: feature:341474-341547:-1:exon
so has part: feature:341211-341285:-1:exon
so has part: feature:340831-341040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:341757-341829:-1:exon

position:341757:-1
position: 341757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:341474-341547:-1:exon

position:341474:-1
position: 341474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341547:-1
position: 341547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:341211-341285:-1:exon

position:341211:-1
position: 341211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341285:-1
position: 341285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:340831-341040:-1:exon

position:341040:-1
position: 341040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1210100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1210100
old locus tag: PCHAS_121010
note: term=annotation;date=20120313;qualifier=added_liter ature=pmid:22389454;qualifier=removed_product=conserved protein, unknown function;qualifier=added_product=inner membrane complex protein, putative;qualifier=added_literature=pmid:20844581;curatorN ame=ucb@sanger.ac.uk; ;query 115-115;GPI_cleavage_site_score=0.64089996
codon start: 1
product: inner membrane complex sub-compartment protein 1, putative
translation: MGNIVSCCSLDESKKYVNDDEILETFSNAEISEFKNRLKNNIQIVVLLQDGTKLPCNLQANFAEKTLCISCHQKVRMINFSDIRSLLYGEEQLKRVETQANLISGNCCLALHLDDSGNCIPIKFEAMKDKNLFIYIMRDYKKN
SIO_010081: PCHAS_1210100
subclass of: SO_0000673
so part of: PCHAS_1210100
location: complement(join(340831..341040,341211..341285,341474..341547,341757..341829))
location: region:340831-341829:-1
so has part: feature:341757-341829:-1:exon
so has part: feature:341474-341547:-1:exon
so has part: feature:341211-341285:-1:exon
so has part: feature:340831-341040:-1:exon

XP_016654192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341757-341829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:341474-341547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:341211-341285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340831-341040:-1:exon

PCHAS_1210200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1210200
old locus tag: PCHAS_121020
so part of: sequence
location: complement(<343805..>346189)
location: region:343805-346189:-1
so has part: feature:343805-346189:-1:exon
subclass of: SO_0000010

27794953
type: Gene
SIO_000068: ncbigene

position:343805:-1
position: 343805
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:346189:-1
position: 346189
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343805-346189:-1:exon

PCHAS_1210200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1210200
old locus tag: PCHAS_121020
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798826.1
SIO_010081: PCHAS_1210200
subclass of: SO_0000673
so part of: PCHAS_1210200
location: complement(join(<343805..344051,344181..>346189))
location: region:343805-346189:-1
so has part: feature:344181-346189:-1:exon
so has part: feature:343805-344051:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344181-346189:-1:exon

position:344181:-1
position: 344181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:343805-344051:-1:exon

position:344051:-1
position: 344051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1210200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1210200
old locus tag: PCHAS_121020
note: tmhmm; query 1-752; ;query 617-642; ;query 594-616; ;query 643-665; ;query 1-593; ;query 666-751
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MSKLKKEKCDKKKNFVEIFMDPNNVGAKKVDFSYYINIESTILELLLDNNLESYKNAGKLLFIILSGLSTRVLYIKRILNLIHLFFYKGGQKFYHSDLHLSILLSLQSNVKMYYSKFSIYIYNLLLSNNDLYGIEINKNKFVPKHYISTLVDYLYFYIKDFMILARKIIYNEMGEQIKVNNKNYMAMYDKQKEDKTYKDKIKNEKKKKIILHNENDEEIMQNFWKIFKYSFPKSIERKFKELVSQCSRINYPLHSIYLDIYILINIKNVIKVIILIDQLLDSDFPYYYFYEIKLKLLLLHVHKYYKKTIPNDGSICEGIKQNGMGDNLIISNKSNKANNLKYADISKNITNEDDVENENKEKAGELNDINNFANDDIYSLCSSSNKDSEKGDTYMNQESNAIDFYNNSMDNKYIYLDNFMNLYANYTENEISSIPSISDFQNNNLLDKLKIKSKDIRMDYSTSSLLGNFLKDEIKVNDDETKTNYKIKDGIDSHHNNADEKEGYDNFFSKREGKIVKHINNENIQNINKNTYNDIVYNINVIEKVAKSLLIKSCYDPIYLKLFYSYLLPLISFNKRIEIFLIYSHGNYKLIKPLVFIIFYNNYGPEFILNTFNIIFKDQNLFQMYKNTYFNEISLKNVTKTHFIFLFLLSVFFYNNPMESMLYIFKLFHKYDKEVINDQEGDIDYKKIYEDVILENDEKWIEQKKNINIMIIKFIEIYQEKFNIYLCNYFDFYRIYFILFVSCVDINKEAL
SIO_010081: PCHAS_1210200
subclass of: SO_0000673
so part of: PCHAS_1210200
location: complement(join(343805..344051,344181..346189))
location: region:343805-346189:-1
so has part: feature:344181-346189:-1:exon
so has part: feature:343805-344051:-1:exon

XP_016654193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344181-346189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343805-344051:-1:exon

PCHAS_1210300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1210300
old locus tag: PCHAS_121030
so part of: sequence
location: <347372..>348112
location: region:347372-348112:1
so has part: feature:347372-348112:1:exon
subclass of: SO_0000010

27794954
type: Gene
SIO_000068: ncbigene

position:347372:1
position: 347372
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:348112:1
position: 348112
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347372-348112:1:exon

PCHAS_1210300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1210300
old locus tag: PCHAS_121030
product: BET1-like protein, putative
transcript id: XM_016798828.1
SIO_010081: PCHAS_1210300
subclass of: SO_0000673
so part of: PCHAS_1210300
location: join(<347372..347503,347679..347735,347841..347915,348029..>348112)
location: region:347372-348112:1
so has part: feature:347372-347503:1:exon
so has part: feature:347679-347735:1:exon
so has part: feature:347841-347915:1:exon
so has part: feature:348029-348112:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347372-347503:1:exon

position:347503:1
position: 347503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:347679-347735:1:exon

position:347679:1
position: 347679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347735:1
position: 347735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:347841-347915:1:exon

position:347841:1
position: 347841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347915:1
position: 347915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:348029-348112:1:exon

position:348029:1
position: 348029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1210300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1210300
old locus tag: PCHAS_121030
note: term=annotation;date=20180416;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=bet1-like protein, putative;qualifier=added_gene_name=bet1;qualifier=added_GO :0031201;qualifier=added_GO:0005484;curatorName=ucb@sanger .ac.uk; ;query 1-91; ;query 92-111; ;query 112-115; tmhmm; query 1-116; iprscan;Superfamily:SSF58038; score=7.32E-11;query 16-84;description=null; iprscan;InterPro:IPR000727 : Target SNARE coiled-coil region;SMART:SM00397; score=2.2E-4;query 17-84;description=Target SNARE coiled-coil homology domain; iprscan;InterPro:IPR000727 : Target SNARE coiled-coil region;Prosite:PS50192; score=10.661;query 22-84;description=Target SNARE coiled-coil homology domain
codon start: 1
product: BET1-like protein, putative
translation: MDFNSRKKKNKNNYDLYNENINIYLEENDNYILDLESKVQTLKLIGSNMRDEVKTSNSLLYNLSDQMDNVNRKLTGVYRNVKNLIKRKGNKYMVYLVLFFLFLLFLMNYLYRKNR
SIO_010081: PCHAS_1210300
subclass of: SO_0000673
so part of: PCHAS_1210300
location: join(347372..347503,347679..347735,347841..347915,348029..348112)
location: region:347372-348112:1
so has part: feature:347372-347503:1:exon
so has part: feature:347679-347735:1:exon
so has part: feature:347841-347915:1:exon
so has part: feature:348029-348112:1:exon

XP_016654194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347372-347503:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347679-347735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347841-347915:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348029-348112:1:exon

PCHAS_1210400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1210400
old locus tag: PCHAS_121040
so part of: sequence
location: <348887..>350662
location: region:348887-350662:1
so has part: feature:348887-350662:1:exon
subclass of: SO_0000010

3486929
type: Gene
SIO_000068: ncbigene

position:348887:1
position: 348887
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:350662:1
position: 350662
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348887-350662:1:exon

PCHAS_1210400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1210400
old locus tag: PCHAS_121040
product: protein ARV1, putative
transcript id: XM_728864.2
SIO_010081: PCHAS_1210400
subclass of: SO_0000673
so part of: PCHAS_1210400
location: <348887..>350662
location: region:348887-350662:1
so has part: feature:348887-350662:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:348887-350662:1:exon

PCHAS_1210400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1210400
old locus tag: PCHAS_121040
note: term=annotation;date=20150824;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=protein arv1, putative;qualifier=added_gene_name=arv1;curatorName=ucb@sa nger.ac.uk; ;query 1-70; ;query 498-508; ;query 560-565; ;query 71-90; ;query 475-497; ;query 509-531; ;query 541-559; ;query 566-588; ;query 91-474; ;query 532-540; ;query 589-591; ;query 572-572;GPI_cleavage_site_score=0.103199996; tmhmm; query 1-592; pfam_scan;Pfam:PF04161.9; E()=5.4E-23;score=82.2;query 2-107;description=Arv1; iprscan;InterPro:IPR007290 : Arv1-like protein;Pfam:PF04161; score=2.7E-24;query 2-104;description=Arv1 protein
codon start: 1
product: protein ARV1, putative
translation: MICIKCGRCNSQIYTIFDKSNIKLNKCHDCNKICDEYIEKNPFIIFMNILFLRPEIYRHIVFNRLKYSDKFIHVFFLKIIIIFLIINVYLHPKFENDNANYNKFTNIFLMNTDLDIPIQNTSPSYNCSSYTLFAYKYNEKNNLYGLYNIFHNSNISNLVNIYKNKLLTCIFDNKFKNENVCIPNKYNKYADHDEWIINLLLHNNKNSRLNTHNGHKCGMIEDDEIDEKKQKNDNNIINTKQTSDNSISNTKRQYRITEYLENGINFIKNKIKYESIFYMKKRKTLLKNNLITFKDFNEYTKLKQTINVHIYDHNKGYKITFNHIENKKYDINYIISYLRNIFFYEQNDTLKNSYFENEGNVYIQNNNNNDVCEEKQKYEFNVFEKNNSMCYEYENSEYNINGLENVCPYFLKNINLVLDKTKMANDIKDKQNMDQDNFSVEQISMYSKILYSNLDNEKYILKICNSSFSLKKLKLVTINYLLYFLFLCAFTYIFKLYQQRKYKINITMVKYNYLFMLFVLSNYPLVIYFILKVFNYNYINIYLNIYTLVCNIIAYHIFISNDGNYIFYSIFSVLVSYLLKTLFMIQIIPYM
SIO_010081: PCHAS_1210400
subclass of: SO_0000673
so part of: PCHAS_1210400
location: 348887..350662
location: region:348887-350662:1
so has part: feature:348887-350662:1:exon

XP_733957.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348887-350662:1:exon

PCHAS_1210500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1210500
old locus tag: PCHAS_121050
so part of: sequence
location: complement(<351224..>352036)
location: region:351224-352036:-1
so has part: feature:351224-352036:-1:exon
subclass of: SO_0000010

3487772
type: Gene
SIO_000068: ncbigene

position:351224:-1
position: 351224
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:352036:-1
position: 352036
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351224-352036:-1:exon

PCHAS_1210500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1210500
old locus tag: PCHAS_121050
product: proteasome subunit beta type-5, putative
transcript id: XM_729693.2
SIO_010081: PCHAS_1210500
subclass of: SO_0000673
so part of: PCHAS_1210500
location: complement(<351224..>352036)
location: region:351224-352036:-1
so has part: feature:351224-352036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351224-352036:-1:exon

PCHAS_1210500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1210500
old locus tag: PCHAS_121050
note: term=annotation;date=20110912;qualifier=removed_pro duct=20S proteasome subunit beta, putative;qualifier=added_product=proteasome subunit beta type-5, putative;qualifier=added_literature=pmid:21245445;curatorN ame=ucb@sanger.ac.uk; pfam_scan;Pfam:PF00227.22; E()=4.6E-46;score=156.6;query 57-237;description=Proteasome; iprscan;InterPro:IPR016050 : Proteasome beta-type subunit, conserved site;Prosite:PS00854; score=1.0;query 63-110;description=Proteasome beta-type subunit, conserved site; iprscan;InterPro:IPR000243 : Peptidase T1A, proteasome beta-subunit;PRINTS:PR00141; score=2.8E-17;query 188-199;description=Peptidase T1A, proteasome beta-subunit; iprscan;InterPro:IPR000243 : Peptidase T1A, proteasome beta-subunit;PRINTS:PR00141; score=2.8E-17;query 67-82;description=Peptidase T1A, proteasome beta-subunit; iprscan;InterPro:IPR000243 : Peptidase T1A, proteasome beta-subunit;PRINTS:PR00141; score=2.8E-17;query 224-235;description=Peptidase T1A, proteasome beta-subunit; iprscan;InterPro:IPR000243 : Peptidase T1A, proteasome beta-subunit;PRINTS:PR00141; score=2.8E-17;query 199-210;description=Peptidase T1A, proteasome beta-subunit; iprscan;InterPro:IPR029055 : Nucleophile aminohydrolases, N-terminal;Superfamily:SSF56235; score=3.46E-64;query 53-259;description=Nucleophile aminohydrolases, N-terminal; iprscan;InterPro:IPR023333 : Proteasome B-type subunit;Prosite:PS51476; score=46.176;query 59-238;description=Proteasome B-type subunit; iprscan;InterPro:IPR001353 : 20S proteasome, A and B subunits;Pfam:PF00227; score=4.8E-46;query 57-237;description=Proteasome, subunit alpha/beta
codon start: 1
product: proteasome subunit beta type-5, putative
translation: MMEYSTDFMSQIDNLINDEEENVNTTDELEFCLAPISVPRDFIKYAKTENKKLFDFHKGTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIEINKHILGTMAGGAADCFYWEKYLGQIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYDHTGFNMFYIDDEGKKVEGNLFSCGSGSTYAYSILDTAYDYNLSVEEAVELGRNAIYHATFRDGGSGGKVRVFYIHKDGYSKIIEGEDVYDLHYHYTNPSQKDQYVM
SIO_010081: PCHAS_1210500
subclass of: SO_0000673
so part of: PCHAS_1210500
location: complement(351224..352036)
location: region:351224-352036:-1
so has part: feature:351224-352036:-1:exon

XP_734786.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351224-352036:-1:exon

PCHAS_1210600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1210600
old locus tag: PCHAS_121060
so part of: sequence
location: complement(<353848..>354375)
location: region:353848-354375:-1
so has part: feature:353848-354375:-1:exon
subclass of: SO_0000010

3490724
type: Gene
SIO_000068: ncbigene

position:353848:-1
position: 353848
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:354375:-1
position: 354375
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353848-354375:-1:exon

PCHAS_1210600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1210600
old locus tag: PCHAS_121060
product: conserved protein, unknown function
transcript id: XM_732606.1
SIO_010081: PCHAS_1210600
subclass of: SO_0000673
so part of: PCHAS_1210600
location: complement(<353848..>354375)
location: region:353848-354375:-1
so has part: feature:353848-354375:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353848-354375:-1:exon

PCHAS_1210600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1210600
old locus tag: PCHAS_121060
note: term=annotation;date=20180521;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;qualifier=added_GO:0016021;curatorName=ucb@sanger .ac.uk; ;query 1-11; ;query 62-67; ;query 128-175; ;query 12-34; ;query 44-61; ;query 68-90; ;query 105-127; ;query 35-43; ;query 91-104; tmhmm; query 1-176; iprscan;Prosite:PS51257; score=5.0;query 1-19;description=null
codon start: 1
product: conserved protein, unknown function
translation: MPRIGELSNCCCLPLGGACIFSAVIILIRFLGFFLENDDTMKTINIVLYAILFGCILMGLLLKNFIILYIVTALMVIYVVDMIIAFVLILLRALSPDSPYTSTNIVFVLFTIFTSMIVMLLFLNIFLSMANVLKEGGTGWENKNYKQIRAEKEEIMNREEKKIIDSQIAQNDYKA
SIO_010081: PCHAS_1210600
subclass of: SO_0000673
so part of: PCHAS_1210600
location: complement(353848..354375)
location: region:353848-354375:-1
so has part: feature:353848-354375:-1:exon

XP_737699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353848-354375:-1:exon

PCHAS_1210700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1210700
old locus tag: PCHAS_121070
so part of: sequence
location: complement(<354814..>356451)
location: region:354814-356451:-1
so has part: feature:354814-356451:-1:exon
subclass of: SO_0000010

3485969
type: Gene
SIO_000068: ncbigene

position:354814:-1
position: 354814
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:356451:-1
position: 356451
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354814-356451:-1:exon

PCHAS_1210700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1210700
old locus tag: PCHAS_121070
product: heptatricopeptide repeat-containing protein, putative
transcript id: XM_727927.2
SIO_010081: PCHAS_1210700
subclass of: SO_0000673
so part of: PCHAS_1210700
location: complement(<354814..>356451)
location: region:354814-356451:-1
so has part: feature:354814-356451:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354814-356451:-1:exon

PCHAS_1210700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1210700
old locus tag: PCHAS_121070
note: term=annotation;date=20180504;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk; term=annotation;date=20180816;qualifier=removed_product=co nserved protein, unknown function;qualifier=added_product=heptatricopeptide repeat-containing protein, putative;qualifier=added_literature=pmid:30102371;curatorN ame=ucb@sanger.ac.uk
codon start: 1
product: heptatricopeptide repeat-containing protein, putative
translation: MFKLKNILKESKEVYKVKNCIFKRYLTKISPYFVYRNNANEFNTAIQNEIKIKHMNSSVLCIFSNMLLKENIKNDFIWKQVERRSYEIIDRFEVGEIASFLFCLSKARYETNLYDSFIPIIKRKCEYLNTSNLAMLISSYSKRKKDDLIILLKDELKKKVHTLYNIVEISMILNALVKCKIQDEELFIKLDNIIVDNVSHKHVHIRDICVISYCYASILYKNMNIFKILSQKIITLFDDANLVDICRILYTYIKINQNYNHILKLSTLKLNICMHKSSISEVINCIHFLPLLKDLVESDDCNNIKKIKDNEICKDKSMNYHIEYGNLFNYILNVFNDKLTSYVNLLNASQISNILYIYSRYNILISLQKLEIFISQIRNIELSDELKIYILYSLSILLKNYENNTIFNFDIFDVNQIFIKDSMENYSYENKNYKKDNTLNFANKPNSEGLKKKLISCLKLWENNINLFINNYDVCSIQDIIKVLNICLILNHINNFIIYSIKNYIIINYKKINEHNSYSLMFYFQKLNVLNNDEDFIEILKYKIR
SIO_010081: PCHAS_1210700
subclass of: SO_0000673
so part of: PCHAS_1210700
location: complement(354814..356451)
location: region:354814-356451:-1
so has part: feature:354814-356451:-1:exon

XP_733020.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354814-356451:-1:exon

PCHAS_1210800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1210800
old locus tag: PCHAS_121080
so part of: sequence
location: <358115..>359203
location: region:358115-359203:1
so has part: feature:358115-359203:1:exon
subclass of: SO_0000010

3490145
type: Gene
SIO_000068: ncbigene

position:358115:1
position: 358115
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:359203:1
position: 359203
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358115-359203:1:exon

PCHAS_1210800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1210800
old locus tag: PCHAS_121080
product: DNA repair protein RAD23, putative
transcript id: XM_732037.2
SIO_010081: PCHAS_1210800
subclass of: SO_0000673
so part of: PCHAS_1210800
location: <358115..>359203
location: region:358115-359203:1
so has part: feature:358115-359203:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358115-359203:1:exon

PCHAS_1210800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1210800
old locus tag: PCHAS_121080
note: pfam_scan;Pfam:PF00627.27; E()=6.5E-9;score=35.4;query 319-352;description=UBA; pfam_scan;Pfam:PF00627.27; E()=1.1E-9;score=37.8;query 135-168;description=UBA; pfam_scan;Pfam:PF00240.19; E()=1.5E-11;score=43.5;query 6-73;description=ubiquitin; pfam_scan;Pfam:PF09280.7; E()=1.9E-16;score=59.4;query 225-278;description=XPC-binding; iprscan;InterPro:IPR000626 : Ubiquitin;SMART:SM00213; score=6.5E-11;query 1-73;description=Ubiquitin domain; iprscan;InterPro:IPR000626 : Ubiquitin;Pfam:PF00240; score=4.8E-13;query 3-72;description=Ubiquitin domain; iprscan;InterPro:IPR000626 : Ubiquitin;Prosite:PS50053; score=14.404;query 1-74;description=Ubiquitin domain; iprscan;InterPro:IPR009060 : UBA-like;Superfamily:SSF46934; score=3.6E-11;query 311-358;description=UBA-like superfamily; iprscan;InterPro:IPR009060 : UBA-like;Superfamily:SSF46934; score=5.71E-12;query 118-174;description=UBA-like superfamily; iprscan;InterPro:IPR029071 : Ubiquitin-related domain;Superfamily:SSF54236; score=2.76E-14;query 1-74;description=Ubiquitin-like domain superfamily; iprscan;InterPro:IPR036353 : XPC-binding domain superfamily;Superfamily:SSF101238; score=7.06E-17;query 224-285;description=XPC-binding domain superfamily; iprscan;InterPro:IPR015360 : XPC-binding domain;Pfam:PF09280; score=1.8E-16;query 225-278;description=XPC-binding domain; iprscan;InterPro:IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote;SMART:SM00165; score=2.3E-5;query 317-354;description=Ubiquitin-associated domain; iprscan;InterPro:IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote;Pfam:PF00627; score=1.2E-9;query 135-168;description=Ubiquitin-associated domain; iprscan;InterPro:IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote;Pfam:PF00627; score=6.7E-9;query 319-352;description=Ubiquitin-associated domain; iprscan;InterPro:IPR015940 : Ubiquitin-associated/translation elongation factor EF1B, N-terminal, …
codon start: 1
product: DNA repair protein RAD23, putative
translation: MKIKVRTLQNTEEEINVDNNDTVSDLKKKIENVFPEMACDKQKLIFSGNILIDENKVVDILKENDIVIVMVTRKIITSKKNNSTKNANELTSPDSLKNNEDKNNDKTKNTDTENKGSENISNPESILLTGDKLKEAIDNICAMGFERELVQKAMVLAYNNPNVAIDYLTNGFQDIIDEGHDISDIKDPSENPNDRDENYSNLSNLLMNYNLLDENERQDMSVNSEALRNSPFFNIIRDAALSNPQRIPEILEMIGRSDPSLLEYIRENQNEFLNALQNYDTDNNAENDLIPNYEYADEANQNTDNFNIPIASLNESEMESVRKLESLGFPKHVALEAFIACDKNEEMAANYLFENMNDYASE
SIO_010081: PCHAS_1210800
subclass of: SO_0000673
so part of: PCHAS_1210800
location: 358115..359203
location: region:358115-359203:1
so has part: feature:358115-359203:1:exon

XP_737130.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358115-359203:1:exon

PCHAS_1210900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1210900
old locus tag: PCHAS_121090
so part of: sequence
location: <362840..>365767
location: region:362840-365767:1
so has part: feature:362840-365767:1:exon
subclass of: SO_0000010

3497724
type: Gene
SIO_000068: ncbigene

position:362840:1
position: 362840
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:365767:1
position: 365767
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362840-365767:1:exon

PCHAS_1210900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1210900
old locus tag: PCHAS_121090
product: PRE-binding protein, putative
transcript id: XM_739513.2
SIO_010081: PCHAS_1210900
subclass of: SO_0000673
so part of: PCHAS_1210900
location: <362840..>365767
location: region:362840-365767:1
so has part: feature:362840-365767:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362840-365767:1:exon

PCHAS_1210900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1210900
old locus tag: PCHAS_121090
note: term=annotation;date=20130917;qualifier=added_gene_ name=PREBP;qualifier=added_literature=pmid:24040327;qualif ier=added_product=pre-binding protein, putative;qualifier=removed_product=qf122 antigen, putative;curatorName=ucb@sanger.ac.uk; term=annotation;date=20150825;qualifier=added_GO:0005634;q ualifier=added_GO:0003700;qualifier=added_GO:0003690;quali fier=added_GO:0006355;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF00013.25; E()=2.3E-4;score=20.7;query 721-776;description=KH_1; pfam_scan;Pfam:PF00013.25; E()=4.9E-15;score=54.9;query 807-865;description=KH_1; iprscan;InterPro:IPR004088 : K Homology, type 1;Pfam:PF00013; score=1.6E-12;query 807-866;description=K Homology domain, type 1; iprscan;Prosite:PS50084; score=16.479;query 805-865;description=null; iprscan;Prosite:PS50084; score=8.89;query 718-777;description=null; iprscan;InterPro:IPR004087 : K Homology;SMART:SM00322; score=0.0024;query 717-782;description=K Homology domain; iprscan;InterPro:IPR004087 : K Homology;SMART:SM00322; score=4.7E-15;query 804-870;description=K Homology domain; iprscan;InterPro:IPR036612 : K Homology domain, type 1 superfamily;Superfamily:SSF54791; score=4.24E-15;query 802-879;description=K Homology domain, type 1 superfamily; iprscan;InterPro:IPR036612 : K Homology domain, type 1 superfamily;Superfamily:SSF54791; score=8.21E-10;query 699-782;description=K Homology domain, type 1 superfamily
codon start: 1
product: PRE-binding protein, putative
translation: MHFITKMGRKAKTPAAGPNKKEETENGASPKNAKETTPNDKKQGGPKQNEPKNKKENVKAAETTLNGQLNGNVQKKKNTTPDSKKGNNDAEKEGTANAKDNNANKGQKNNEDQKKTQKNKNAKNEGGENNKQKGTAAEEKNNNKKAEGNAKNANNKNQDNKKKGKTENSASPQNANNKNNNKEKNEEETKKEEAKKDPKKDLKLKEDERKKIENELNKKFLKLSKQDNYKNISDKIEAEVKRKAEFEAFIVTINSSISKMNAQTPRPVNMKLTSADVENKCKEAKLKKKKLNPKSEEEMEEVNTYINYLEEQLIITKNYESFKGFQNRLFTLKKTCEEKLKENQKSLNEIKVHEKKLKFVEKIIKMKKEKQNIQIKESDIINKESSLPNDKYNTLIKPYNFLNRIQAKYFVYVDKISTNNFENKTSFNISGCNDDIENFISYLKNIDFTEKNYVNLSNKVFKIMLNICDGSFKKMEEDTNVFVHVDNETLYYCGMKDDIPKLKELIEKANNEKNTNAKNISKTIKLDSVLGRGFNKGLLKDIETKTNTLIRMNYDAKTFDASATIKGSKDADIQEAENKLNEILKGLDSEFIKFEERELFALYKKCAYELNDIRKNLNLFVIRHDNGISLVGDNENIKKALEILDHAKNIISSKSVKKKLTEEEAFLFNANYRNQIKAQTGAEVKIFNKTNYKELNISGNKTNIDDAIQMIDDLLKKRKCVEVAINERVIALLLSAKAQKIKDIEKDTYTSIQINKTSYIAQIYGHEDNIYLAKDVLENLVQTEGKDDKDAKEGQDGKSSSSNLYITVEMNIDTEHIGSIIGKKGRTINRIQEDTYVKKIHIDKENKKVFIQGTPKTVEVAQKEIQKILSRSKEENSYYDRYNSGSNTRHMASNSNYNSNTFSPSNRRQHKSSRTGKSNYRSDSSKNEVYINTNDEKAFPSLHDVTNIQSRKTKKAINLANTKKHDAVQKEIVAN
SIO_010081: PCHAS_1210900
subclass of: SO_0000673
so part of: PCHAS_1210900
location: 362840..365767
location: region:362840-365767:1
so has part: feature:362840-365767:1:exon

XP_744606.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362840-365767:1:exon

PCHAS_1211000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1211000
old locus tag: PCHAS_121100
so part of: sequence
location: complement(<366853..>368584)
location: region:366853-368584:-1
so has part: feature:366853-368584:-1:exon
subclass of: SO_0000010

3497725
type: Gene
SIO_000068: ncbigene

position:366853:-1
position: 366853
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:368584:-1
position: 368584
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366853-368584:-1:exon

PCHAS_1211000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1211000
old locus tag: PCHAS_121100
product: heme oxygenase, putative
transcript id: XM_016798829.1
SIO_010081: PCHAS_1211000
subclass of: SO_0000673
so part of: PCHAS_1211000
location: complement(join(<366853..366978,367288..367427,367576..367657,367742..367903,368026..368152,368301..>368584))
location: region:366853-368584:-1
so has part: feature:368301-368584:-1:exon
so has part: feature:368026-368152:-1:exon
so has part: feature:367742-367903:-1:exon
so has part: feature:367576-367657:-1:exon
so has part: feature:367288-367427:-1:exon
so has part: feature:366853-366978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368301-368584:-1:exon

position:368301:-1
position: 368301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368026-368152:-1:exon

position:368026:-1
position: 368026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368152:-1
position: 368152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:367742-367903:-1:exon

position:367742:-1
position: 367742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367903:-1
position: 367903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:367576-367657:-1:exon

position:367576:-1
position: 367576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367657:-1
position: 367657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:367288-367427:-1:exon

position:367288:-1
position: 367288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367427:-1
position: 367427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:366853-366978:-1:exon

position:366978:-1
position: 366978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1211000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1211000
old locus tag: PCHAS_121100
note: term=annotation;date=20120111;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=heme oxygenase, putative;qualifier=added_gene_name=ho;qualifier=added_lite rature=pmid:19073183;qualifier=added_literature=pmid:20491 653;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF01126.16; E()=5.2E-6;score=26.3;query 124-228;description=Heme_oxygenase; iprscan;InterPro:IPR016084 : Haem oxygenase-like, multi-helical;Superfamily:SSF48613; score=1.82E-21;query 132-289;description=Haem oxygenase-like, multi-helical; iprscan;InterPro:IPR016053 : Haem oxygenase-like;Pfam:PF01126; score=5.3E-6;query 124-228;description=Haem oxygenase-like
codon start: 1
product: heme oxygenase, putative
translation: MIYTSLFFFLIYTFLSIVHNEKIYYNIDYKKNSNDIFFIKKFFKYKKKYRINAKEFVNYKEIQLKRINDYRKRSGTGKNDINYNIRDSYNSRENSLFVRNEVFPTLAKIENEKLKEREKNRETYKNINDYNTSFDRRTFIQFLIDLYNIFMKIDELFLINKDMFSILTYNGPMMLTNYLYEDIIYLTSIVENSETITASQYCRDYIYHLEELAEKNKLKFLAHSYVFYKNFHLTKEHLLNSICKYLNIIKTLKSTRYVPDVSNFEYCLNKMSRKWTRWEKDNFLASLHDATDKMMILTKHFENVKE
SIO_010081: PCHAS_1211000
subclass of: SO_0000673
so part of: PCHAS_1211000
location: complement(join(366853..366978,367288..367427,367576..367657,367742..367903,368026..368152,368301..368584))
location: region:366853-368584:-1
so has part: feature:368301-368584:-1:exon
so has part: feature:368026-368152:-1:exon
so has part: feature:367742-367903:-1:exon
so has part: feature:367576-367657:-1:exon
so has part: feature:367288-367427:-1:exon
so has part: feature:366853-366978:-1:exon

XP_016654195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368301-368584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:368026-368152:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:367742-367903:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:367576-367657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367288-367427:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:366853-366978:-1:exon

PCHAS_1211100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1211100
old locus tag: PCHAS_121110
so part of: sequence
location: <369906..>373057
location: region:369906-373057:1
so has part: feature:369906-373057:1:exon
subclass of: SO_0000010

3490653
type: Gene
SIO_000068: ncbigene

position:369906:1
position: 369906
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:373057:1
position: 373057
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369906-373057:1:exon

PCHAS_1211100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1211100
old locus tag: PCHAS_121110
product: RING zinc finger protein, putative
transcript id: XM_016798830.1
SIO_010081: PCHAS_1211100
subclass of: SO_0000673
so part of: PCHAS_1211100
location: join(<369906..371090,371188..371308,371474..371534,371632..371742,371884..371945,372042..372079,372173..372256,372363..372463,372559..>373057)
location: region:369906-373057:1
so has part: feature:369906-371090:1:exon
so has part: feature:371188-371308:1:exon
so has part: feature:371474-371534:1:exon
so has part: feature:371632-371742:1:exon
so has part: feature:371884-371945:1:exon
so has part: feature:372042-372079:1:exon
so has part: feature:372173-372256:1:exon
so has part: feature:372363-372463:1:exon
so has part: feature:372559-373057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369906-371090:1:exon

position:371090:1
position: 371090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:371188-371308:1:exon

position:371188:1
position: 371188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371308:1
position: 371308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:371474-371534:1:exon

position:371474:1
position: 371474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371534:1
position: 371534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:371632-371742:1:exon

position:371632:1
position: 371632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371742:1
position: 371742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:371884-371945:1:exon

position:371884:1
position: 371884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371945:1
position: 371945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:372042-372079:1:exon

position:372042:1
position: 372042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372079:1
position: 372079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:372173-372256:1:exon

position:372173:1
position: 372173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372256:1
position: 372256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:372363-372463:1:exon

position:372363:1
position: 372363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372463:1
position: 372463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:372559-373057:1:exon

position:372559:1
position: 372559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1211100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1211100
old locus tag: PCHAS_121110
note: term=annotation;date=20170412;qualifier=removed_pro duct=E3 ubiquitin-protein ligase, putative;qualifier=added_product=ring zinc finger protein, putative;qualifier=removed_ec_number=6.3.2.19;curatorName= ucb@sanger.ac.uk; ;query 728-728;GPI_cleavage_site_score=0.152; pfam_scan;Pfam:PF00097.21; E()=1.9E-6;score=27.5;query 155-199;description=zf-C3HC4; iprscan;InterPro:IPR001841 : Zinc finger, RING-type;SMART:SM00184; score=2.4E-9;query 155-199;description=Zinc finger, RING-type; iprscan;InterPro:IPR001841 : Zinc finger, RING-type;Prosite:PS50089; score=11.471;query 155-199;description=Zinc finger, RING-type; iprscan;InterPro:IPR017907 : Zinc finger, RING-type, conserved site;Prosite:PS00518; score=1.0;query 171-180;description=Zinc finger, RING-type, conserved site; iprscan;Superfamily:SSF57850; score=1.09E-11;query 143-205;description=null; iprscan;InterPro:IPR018957 : Zinc finger, C3HC4 RING-type;Pfam:PF00097; score=1.9E-6;query 155-199;description=Zinc finger, C3HC4 RING-type
codon start: 1
product: RING zinc finger protein, putative
translation: MIQNFEISKAENSSNNDPSYIQNNINDNWKKDVEGTNKNKNKKTVNEKGKNANNKKGINLNYIVNYNRYEPKISILKKTVCITTAKNIKNKRNNNQASSSISNNNNNKKQYINCNFRYYVLEKKYLENSLNGDNIEWKHIEKVDYIIYDDTNLACPICLENNIISPRITQCRHIFCFLCILKYFIDEGKDKAWKKCPICFEIINENDLRCVKFQYVKKYNINDKISMCLLFTQNKKIDIKCEKLCFNKNFKVTNNNFIKNKKNMDFKDIVNLDTTIQNLYSFSQNNSEKILKLNLNLGVQFCKIYYLYNPLSLLLKDLRILYFIRQNNQNKFFISDQDIIQKAIANIKLRVAEYMSIPIEKLDSNLIYTEEGTELGSENLADSFYLYNNLAQEVYDSIEQIKKEMVMDSYGMPTKKGVSSDRRESTDSEKNNNETEIYFYQSIDGQCIFLDPFVLKLILFEYDNDMDRIPKFLNNKQITYIESFELTEKAKRKYTFLSCLPLGTNVSFATLNIDDVISKRTQTHFAKEISERNKKNYIILSKKKKEEKLFQALANEEIARKEKRYWDLPTNTINIHVPKATGSPDKLRLSNQMGGNKDSQTELYDDEILKYEDFIPSEEIYNTNSNSLDYDQYENQFFDAMELKKKKINNNFSDKKKKKKNDIENSKKNKCDNKNVANKFAAATKQQFLDDDDKIYQISKSFLDVAKSNCNTKIDINEKKEDNISIGNGTLSVNLMDCIKVKTTKKKKAENKN
SIO_010081: PCHAS_1211100
subclass of: SO_0000673
so part of: PCHAS_1211100
location: join(369906..371090,371188..371308,371474..371534,371632..371742,371884..371945,372042..372079,372173..372256,372363..372463,372559..373057)
location: region:369906-373057:1
so has part: feature:369906-371090:1:exon
so has part: feature:371188-371308:1:exon
so has part: feature:371474-371534:1:exon
so has part: feature:371632-371742:1:exon
so has part: feature:371884-371945:1:exon
so has part: feature:372042-372079:1:exon
so has part: feature:372173-372256:1:exon
so has part: feature:372363-372463:1:exon
so has part: feature:372559-373057:1:exon

XP_016654196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369906-371090:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:371188-371308:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:371474-371534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371632-371742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371884-371945:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:372042-372079:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:372173-372256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:372363-372463:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372559-373057:1:exon

PCHAS_1211200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1211200
old locus tag: PCHAS_121120
so part of: sequence
location: complement(<374205..>375428)
location: region:374205-375428:-1
so has part: feature:374205-375428:-1:exon
subclass of: SO_0000010

27794955
type: Gene
SIO_000068: ncbigene

position:374205:-1
position: 374205
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:375428:-1
position: 375428
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374205-375428:-1:exon

PCHAS_1211200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1211200
old locus tag: PCHAS_121120
product: conserved protein, unknown function
transcript id: XM_016798831.1
SIO_010081: PCHAS_1211200
subclass of: SO_0000673
so part of: PCHAS_1211200
location: complement(<374205..>375428)
location: region:374205-375428:-1
so has part: feature:374205-375428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374205-375428:-1:exon

PCHAS_1211200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1211200
old locus tag: PCHAS_121120
note: term=annotation;date=20180504;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk
codon start: 1
product: conserved protein, unknown function
translation: MSYANNFQRVLYASRFMRVFGKFKRAQLREKPQRKIGPFSNPVKRLARLKEKERLFCEIGMPRIIPRAKTGYSEKILEVIKPPNVRKEVLDRRLEFLLSNESVYQQMYNKMYNGITPYQCELYMWERQMRDLRKIYRAQYLHKLSEITSEERSKQLKLLLQTKEDKKKRREIIRNRILEDKKRKAILKDRLSLEKKLTQSILFRRQSNIKKKNVYWLVKLQKKSLYINSEDLKKKIYQTDTSNSINSTSATVNSSINYGDDENSLFNRNISTSDLYKDLGYDVKDKNNNNDKIYKADNIYKTLLEESFDFLEEDEDQFEQTDANENQGDIPHKQRAHILYSSFSNDEKIKLLDDKIAILSKIIEEKSYSKGVDNNNIMFYIQLKDKLEASKQAFLEKKYLKDKEKLN
SIO_010081: PCHAS_1211200
subclass of: SO_0000673
so part of: PCHAS_1211200
location: complement(374205..375428)
location: region:374205-375428:-1
so has part: feature:374205-375428:-1:exon

XP_016654197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374205-375428:-1:exon

PCHAS_1211300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1211300
old locus tag: PCHAS_121130
so part of: sequence
location: <377078..>377912
location: region:377078-377912:1
so has part: feature:377078-377912:1:exon
subclass of: SO_0000010

3494780
type: Gene
SIO_000068: ncbigene

position:377078:1
position: 377078
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:377912:1
position: 377912
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377078-377912:1:exon

PCHAS_1211300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1211300
old locus tag: PCHAS_121130
product: rhoptry associated adhesin, putative
transcript id: XM_736603.1
SIO_010081: PCHAS_1211300
subclass of: SO_0000673
so part of: PCHAS_1211300
location: join(<377078..377584,377679..>377912)
location: region:377078-377912:1
so has part: feature:377078-377584:1:exon
so has part: feature:377679-377912:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377078-377584:1:exon

position:377584:1
position: 377584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:377679-377912:1:exon

position:377679:1
position: 377679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1211300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1211300
old locus tag: PCHAS_121130
note: term=annotation;date=20160708;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=rhoptry associated adhesin, putative;qualifier=added_literature=pmid:27383149;qualifie r=added_gene_name=ra;qualifier=added_GO:0020008;qualifier= added_GO:0009986;qualifier=added_GO:0046812;qualifier=adde d_GO:0030260;curatorName=ucb@sanger.ac.uk
codon start: 1
product: rhoptry associated adhesin, putative
translation: MKKVLVLFFVFLFKIWKETAECSKYPKRKRHGTGMKENYLKNENLNNYSFMMVNPNDEKVMNDNAKNANNNNVNNNDINNNNNNNDNNNNNGNNNNNDNNNNDNNNNDNNNNNNNNNNNNNEEKKNDVPPEKKINKENLLEYGTHDKSGHFIPSYKTLTDEILSTSNALERASNYLKITCSHLMKILEFIPDSKISTQYIKVDNKNVYLKDINTECQDIFFSLEKLTMTTIVLNSKINKLVYVQDS
SIO_010081: PCHAS_1211300
subclass of: SO_0000673
so part of: PCHAS_1211300
location: join(377078..377584,377679..377912)
location: region:377078-377912:1
so has part: feature:377078-377584:1:exon
so has part: feature:377679-377912:1:exon

XP_741696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377078-377584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:377679-377912:1:exon

PCHAS_1211400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1211400
old locus tag: PCHAS_121140
so part of: sequence
location: complement(<378910..>379829)
location: region:378910-379829:-1
so has part: feature:378910-379829:-1:exon
subclass of: SO_0000010

3490029
type: Gene
SIO_000068: ncbigene

position:378910:-1
position: 378910
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:379829:-1
position: 379829
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378910-379829:-1:exon

PCHAS_1211400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1211400
old locus tag: PCHAS_121140
product: cytochrome b-c1 complex subunit 7, putative
transcript id: XM_016798832.1
SIO_010081: PCHAS_1211400
subclass of: SO_0000673
so part of: PCHAS_1211400
location: complement(join(<378910..379280,379622..>379829))
location: region:378910-379829:-1
so has part: feature:379622-379829:-1:exon
so has part: feature:378910-379280:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:379622-379829:-1:exon

position:379622:-1
position: 379622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:378910-379280:-1:exon

position:379280:-1
position: 379280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1211400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1211400
old locus tag: PCHAS_121140
note: term=annotation;date=20150825;qualifier=removed_pro duct=ubiquinol-cytochrome c reductase complex subunit, putative;qualifier=added_product=cytochrome b-c1 complex subunit 7, putative;qualifier=added_gene_name=qcr7;qualifier=removed_ ec_number=1.10.2.2;curatorName=ucb@sanger.ac.uk; ;query 159-159;GPI_cleavage_site_score=1.462; pfam_scan;Pfam:PF02271.12; E()=2.1E-16;score=59.6;query 52-144;description=UCR_14kD; iprscan;InterPro:IPR036544 : Cytochrome b-c1 complex subunit 7 superfamily;Superfamily:SSF81524; score=1.96E-31;query 36-153;description=Cytochrome b-c1 complex subunit 7 superfamily; iprscan;InterPro:IPR003197 : Cytochrome bd ubiquinol oxidase, 14 kDa subunit;Pfam:PF02271; score=1.5E-16;query 51-144;description=Cytochrome b-c1 complex subunit 7
codon start: 1
product: cytochrome b-c1 complex subunit 7, putative
translation: MSLHKEICKYIIKAGSKDIKKLEYEPTKRKTNRLTEAFKNAFFPYYFKFIRGPFERWQYCATTKFLREHGLMYDDMYSDKDPVIERAISLLPKDIKIKRYRRMLRGTHINFLRLYLHPSEQNYDPYIPYLAPYIEEAKFQLQEEEELLGYHPYDRRLYSGGTTGFGDLEPGLHFLVSIPNLYGAAIPHSKKK
SIO_010081: PCHAS_1211400
subclass of: SO_0000673
so part of: PCHAS_1211400
location: complement(join(378910..379280,379622..379829))
location: region:378910-379829:-1
so has part: feature:379622-379829:-1:exon
so has part: feature:378910-379280:-1:exon

XP_016654198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379622-379829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378910-379280:-1:exon

PCHAS_1211500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1211500
old locus tag: PCHAS_121150
so part of: sequence
location: complement(<381693..>382843)
location: region:381693-382843:-1
so has part: feature:381693-382843:-1:exon
subclass of: SO_0000010

3496194
type: Gene
SIO_000068: ncbigene

position:381693:-1
position: 381693
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:382843:-1
position: 382843
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381693-382843:-1:exon

PCHAS_1211500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1211500
old locus tag: PCHAS_121150
product: hypoxanthine-guanine phosphoribosyltransferase, putative
transcript id: XM_016798833.1
SIO_010081: PCHAS_1211500
subclass of: SO_0000673
so part of: PCHAS_1211500
location: complement(join(<381693..382277,382409..382502,382827..>382843))
location: region:381693-382843:-1
so has part: feature:382827-382843:-1:exon
so has part: feature:382409-382502:-1:exon
so has part: feature:381693-382277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:382827-382843:-1:exon

position:382827:-1
position: 382827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:382409-382502:-1:exon

position:382409:-1
position: 382409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382502:-1
position: 382502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:381693-382277:-1:exon

position:382277:-1
position: 382277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1211500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1211500
old locus tag: PCHAS_121150
note: term=annotation;date=20110415;qualifier=removed_pro duct=hypoxanthine phosphoribosyltransferase, putative;qualifier=added_product=hypoxanthine-guanine phosphoribosyltransferase, putative;qualifier=added_gene_name=hgprt;qualifier=added_g ene_synonym=hprt;qualifier=added_ec_number=2.4.2.8;curator Name=ucb@sanger.ac.uk; term=annotation;date=20160221;qualifier=added_gene_synonym =HGXPRT;qualifier=added_gene_synonym=hprt;qualifier=added_ gene_synonym=hpt;qualifier=added_gene_synonym=xprt;qualifi er=added_gene_synonym=gprt;qualifier=added_gene_synonym=hx gprt;qualifier=eupathdb_uc=100041333;curatorName=ucb@sange r.ac.uk; pfam_scan;Pfam:PF00156.23; E()=7.0E-22;score=77.5;query 47-201;description=Pribosyltran; iprscan;InterPro:IPR029057 : Phosphoribosyltransferase-like;Superfamily:SSF53271; scor e=1.57E-48;query 24-222;description=Phosphoribosyltransferase-like; iprscan;InterPro:IPR000836 : Phosphoribosyltransferase;Pfam:PF00156; score=7.2E-22;que ry 47-201;description=Phosphoribosyltransferase domain; iprscan;InterPro:IPR005904 : Hypoxanthine phosphoribosyl transferase;TIGR_TIGRFAMS:TIGR01203; score=1.4E-50;query 43-218;description=Hypoxanthine phosphoribosyl transferase
codon start: 1
product: hypoxanthine-guanine phosphoribosyltransferase, putative
translation: MKIPNNPGAGELGYEPVMIKDEDGYEFDSFVTPDHYKKYLQRVLIPNGLIKSRVERMAFDISKTYNGEEFHLLCLLKGSRSFFTLLLKYLDRIHTYYIEDASTNTYREHYVRVKSYCNTQSTGRLEIVSEDLSCLKGKNVLIVEDIIDTGNTLSKFCDYLKKFEPKTIAISALYIKRTPLWNGFKADFTGFSVPNFFLVGCGLDYNENFRDLNHVCIIADDGIKAFMQPSS
SIO_010081: PCHAS_1211500
subclass of: SO_0000673
so part of: PCHAS_1211500
location: complement(join(381693..382277,382409..382502,382827..382843))
location: region:381693-382843:-1
so has part: feature:382827-382843:-1:exon
so has part: feature:382409-382502:-1:exon
so has part: feature:381693-382277:-1:exon

XP_016654199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382827-382843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382409-382502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:381693-382277:-1:exon

PCHAS_1211600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1211600
old locus tag: PCHAS_121160
so part of: sequence
location: complement(<384478..>386259)
location: region:384478-386259:-1
so has part: feature:384478-386259:-1:exon
subclass of: SO_0000010

3497570
type: Gene
SIO_000068: ncbigene

position:384478:-1
position: 384478
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:386259:-1
position: 386259
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384478-386259:-1:exon

PCHAS_1211600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1211600
old locus tag: PCHAS_121160
product: phosphoglucomutase, putative
transcript id: XM_739363.1
SIO_010081: PCHAS_1211600
subclass of: SO_0000673
so part of: PCHAS_1211600
location: complement(<384478..>386259)
location: region:384478-386259:-1
so has part: feature:384478-386259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:384478-386259:-1:exon

PCHAS_1211600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1211600
old locus tag: PCHAS_121160
note: pfam_scan;Pfam:PF02880.12; E()=7.5E-13;score=48.5;query 337-456;description=PGM_PMM_III; pfam_scan;Pfam:PF02878.12; E()=8.0E-33;score=112.9;query 49-187;description=PGM_PMM_I; pfam_scan;Pfam:PF02879.12; E()=6.1E-24;score=84.5;query 222-327;description=PGM_PMM_II; iprscan;InterPro:IPR005846 : Alpha-D-phosphohexomutase, alpha/beta/alpha domain III;Pfam:PF02880; score=7.2E-13;query 337-456;description=Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; iprscan;InterPro:IPR005845 : Alpha-D-phosphohexomutase, alpha/beta/alpha domain II;Pfam:PF02879; score=4.2E-24;query 222-327;description=Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; iprscan;InterPro:IPR005844 : Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I;Pfam:PF02878; score=9.1E-33;query 49-187;description=Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; iprscan;InterPro:IPR016066 : Alpha-D-phosphohexomutase, conserved site;Prosite:PS00710; score=1.0;query 149-158;description=Alpha-D-phosphohexomutase, conserved site; iprscan;InterPro:IPR016055 : Alpha-D-phosphohexomutase, alpha/beta/alpha I, II and III;Superfamily:SSF53738; score=4.32E-18;query 220-326;description=Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III; iprscan;InterPro:IPR016055 : Alpha-D-phosphohexomutase, alpha/beta/alpha I, II and III;Superfamily:SSF53738; score=1.1E-41;query 37-247;description=Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III; iprscan;InterPro:IPR016055 : Alpha-D-phosphohexomutase, alpha/beta/alpha I, II and III;Superfamily:SSF53738; score=7.85E-27;query 317-465;description=Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III; iprscan;InterPro:IPR036900 : Alpha-D-phosphohexomutase, C-terminal domain superfamily;Superfamily:SSF55957; score=4.71E-10;query 472-580;description=Alpha-D-phosphohexomutase, C-terminal domain superfamily
codon start: 1
product: phosphoglucomutase, putative
translation: MDKIKNPELLKSIEVWNLFSKPKYLSDQTKEVINNSNEDELKKLFLNRLNFGTAGLRGKMGVGFNAMNVVTIIQTTQGLCTYLINKYGADACKNRGIIFGFDGRHNSESFAHVASAVCLSKGFKVYLFSQTVATPILCYSSFKKSCLCGVMVTASHNPKIDNGYKLYGENGAQIIPPVDKNVSDCILDNLKPWNDIYKYLDDDFYLKDKSLVKDIYHEMFDSFISDLKKEFNFSCNRNSRTKLVIVYSPMHGVGRKFVQGIMQIVGYNNLLTVPQQALPDPEFSTVTFPNPEEKGALDLSMELADQVKSPLVVANDPDADRFACAEKYNNKWKILSGDELGIIFAYFIMKDYEKKNIDKSKHVFLCTIVCSRMLKMLCQKHGYKYDETLTGFKWLINKAIEYNDNKHNTLYCYEEALGHALSKHIRDKCGISALAYWVEIAIHLYENNSTFHQCLEDIRKEIGYFVSNNGYYTILDSNDVANIFNEFRSKGNYKKQLASYKIAHIRDLTTGYDSQTPDKKSLIAPTPDSQNITLYFENTAIVTIRASGTEPKIKWYGEISRKSYDEAKKDIDKLIDEVMPVFMQPDKYKVKRC
SIO_010081: PCHAS_1211600
subclass of: SO_0000673
so part of: PCHAS_1211600
location: complement(384478..386259)
location: region:384478-386259:-1
so has part: feature:384478-386259:-1:exon

XP_744456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384478-386259:-1:exon

PCHAS_1211700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1211700
old locus tag: PCHAS_121170
so part of: sequence
location: complement(<388070..>389704)
location: region:388070-389704:-1
so has part: feature:388070-389704:-1:exon
subclass of: SO_0000010

3493650
type: Gene
SIO_000068: ncbigene

position:388070:-1
position: 388070
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:389704:-1
position: 389704
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388070-389704:-1:exon

PCHAS_1211700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1211700
old locus tag: PCHAS_121170
product: GMP synthase [glutamine-hydrolyzing], putative
transcript id: XM_735484.2
SIO_010081: PCHAS_1211700
subclass of: SO_0000673
so part of: PCHAS_1211700
location: complement(<388070..>389704)
location: region:388070-389704:-1
so has part: feature:388070-389704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:388070-389704:-1:exon

PCHAS_1211700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1211700
old locus tag: PCHAS_121170
note: term=annotation;date=20101203;qualifier=added_EC_nu mber=6.3.5.2;qualifier=added_gene_name=gmps;curatorName=uc b@sanger.ac.uk; term=annotation;date=20150825;qualifier=removed_product=GM P synthetase, putative;qualifier=added_product=gmp synthase [glutamine-hydrolyzing], putative;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF00958.18; E()=3.8E-32;score=110.0;query 455-543;description=GMP_synt_C; pfam_scan;Pfam:PF00117.24; E()=2.2E-31;score=108.9;query 11-216;description=GATase; pfam_scan;Pfam:PF02540.13; E()=3.5E-6;score=26.2;query 239-311;description=NAD_synthase; iprscan;InterPro:IPR004739 : GMP synthase, N-terminal;TIGR_TIGRFAMS:TIGR00888; score=1.6E-53;query 9-220;description=GMP synthase, glutamine amidotransferase; iprscan;InterPro:IPR017926 : Glutamine amidotransferase type 1;Pfam:PF00117; score=1.2E-31;query 11-216;description=Glutamine amidotransferase; iprscan;InterPro:IPR017926 : Glutamine amidotransferase type 1;Prosite:PS51273; score=29.154;query 8-223;description=Glutamine amidotransferase; iprscan;InterPro:IPR025777 : GMP synthetase ATP pyrophosphatase domain;Prosite:PS51553; score=72.583;query 224-419;description=GMP synthetase ATP pyrophosphatase domain; iprscan;InterPro:IPR029062 : Class I glutamine amidotransferase-like;Superfamily:SSF52317; score=4.58E-45;query 6-253;description=Class I glutamine amidotransferase-like; iprscan;InterPro:IPR001674 : GMP synthase, C-terminal;Pfam:PF00958; score=1.3E-35;query 453-543;description=GMP synthase, C-terminal; iprscan;InterPro:IPR001674 : GMP synthase, C-terminal;TIGR_TIGRFAMS:TIGR00884; score=6.0E-123;query 232-544;description=GMP synthase, C-terminal; iprscan;Superfamily:SSF54810; score=2.48E-44;query 424-544;description=null; iprscan;Superfamily:SSF52402; score=2.44E-44;query 210-465;description=null; iprscan;InterPro:IPR022310 : NAD/GMP synthase;Pfam:PF02540; score=3.6E-6;query 239-311;description=NAD/GMP synthase
codon start: 1
product: GMP synthase [glutamine-hydrolyzing], putative
translation: MEGNNYDMILVLNFGSQYFHLIVKRLNNIKIYSETKDYNVDLKDIQNLNIKGVIFSGSPHSVNAKNGPHVKKEVLNYFIENKIPIFGICYGMQELAFQMNGKVGKSKNSEHGSTDVTLISHDYKDNASYKNYKLLEKDTNCLLFDDIKDTSKMNVWMNHTEEVIEIPENYYLVNSSENCFICGIYNKEYNIYGVQFHPEVYETIDGDQMFYNFAYKICKCTKTFDPIKYHEVEFNNIKKYAHDHYVIAAMSGGIDSTVAAAMTHKIFKDRFFGIFIDNGLLRKNEGEKVYTFIKNTFPDMNITKIDASEIFLNQLKGVTDPEQKRKIIGKLFIEEFEKAVYSMDIDIEKTYLLQGTLYPDIIESKCSKNLSDTIKTHHNVGGLPKNLKFKLFEPFKFLFKDDVKKLSQELNLPKELTNRHPFPGPGLAIRVIGEIDKHKLDILREVDDIFINSLKEFNLYDDIGQAFAVIFSSKSVGVRGDARSYDHICALRAVKTTSYMTASYYKIPHDILEKITTRILSNVKGVNRILYDISSKPPSTIEFE
SIO_010081: PCHAS_1211700
subclass of: SO_0000673
so part of: PCHAS_1211700
location: complement(388070..389704)
location: region:388070-389704:-1
so has part: feature:388070-389704:-1:exon

XP_740577.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388070-389704:-1:exon

PCHAS_1211800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1211800
old locus tag: PCHAS_121180
so part of: sequence
location: <391354..>395399
location: region:391354-395399:1
so has part: feature:391354-395399:1:exon
subclass of: SO_0000010

3498348
type: Gene
SIO_000068: ncbigene

position:391354:1
position: 391354
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:395399:1
position: 395399
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391354-395399:1:exon

PCHAS_1211800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1211800
old locus tag: PCHAS_121180
product: NLI interacting factor-like phosphatase, putative
transcript id: XM_016798834.1
SIO_010081: PCHAS_1211800
subclass of: SO_0000673
so part of: PCHAS_1211800
location: join(<391354..394798,394949..395150,395300..>395399)
location: region:391354-395399:1
so has part: feature:391354-394798:1:exon
so has part: feature:394949-395150:1:exon
so has part: feature:395300-395399:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391354-394798:1:exon

position:394798:1
position: 394798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:394949-395150:1:exon

position:394949:1
position: 394949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395150:1
position: 395150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:395300-395399:1:exon

position:395300:1
position: 395300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1211800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1211800
old locus tag: PCHAS_121180
note: term=annotation;date=20140713;qualifier=removed_pro duct=phosphatase, putative;qualifier=added_product=protein phosphatase, putative;qualifier=added_literature=pmid:25011111;qualifie r=added_gene_name=nif4;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF03031.14; E()=6.5E-13;score=48.6;query 420-526;description=NIF; iprscan;InterPro:IPR004274 : NLI interacting factor;Pfam:PF03031; score=2.7E-13;query 413-526;description=FCP1 homology domain; iprscan;InterPro:IPR004274 : NLI interacting factor;Prosite:PS50969; score=18.044;query 388-547;description=FCP1 homology domain; iprscan;InterPro:IPR004274 : NLI interacting factor;SMART:SM00577; score=1.0E-10;query 391-532;description=FCP1 homology domain; iprscan;InterPro:IPR036412 : HAD-like superfamily;Superfamily:SSF56784; score=3.89E-25;query 238-539;description=HAD-like superfamily
codon start: 1
product: NLI interacting factor-like phosphatase, putative
translation: MDTNKVYLPKNITLPCKLKWAVDDNSMVSSNQIIAFIIETKNEDINIQNDELINNNNDPQNINQHNYDHNIYEQNNANKCINSTGNLNNENEVGSENAKNDTNDQKNVNNQNKLNDEQNNVINFILNSRNTREIKESNHIFLRSNNSGRINILKKNINPQKDEYIYIDNPNELLCEINDEECKHEIIFSGLCANCFMNQEDINKNKNDKYFLSPGFITNEKKLFINTDKAIDLEKERVQNIINNKKLCLVLDLDNTLLQASFYIHSVHIEKDVINITTDFDDDEFAPMGNNFGNGNQPSDNNKFENEEINIKSEDNPLNSGKDCYKKFDHILNQKTQNDEINSEMLSFFFNANKKKNKLENDIYHDIKMNYEEYLNFLAKVNTFNLLKYNGKYIHYEDLNDEAIKAKIKKFESSVLKTTVKYDKGLYTIYYKLRPGVIEFLQKMNQKYEIYLYTMGTIEHAKSCLFLLDPLKKFFGNRIFSRKDCTNGMKHLNRILPTYRSISICVDDSEYIWKEANSCIKVHAYNYFPEIQFLGDIKKKTYFLTKFFSMAQSYLNFSTDIYRFINFKCNEYEEFKKNYLNNFMINNMYTQNLSIPYLAPMGIQMGGTHANINNTAFVNNSNIVKSENTIENGNFSEKNKGNIFNGVNNTLSLNFDEDNDDFSNDMLIDLEKEFETDNENDSNLKRKSHNSNKINLVNDQELANYSYPLDTTYGDQIENPNEPILSIQTNAGNIEQANNNINDNSNDIFTASDEGIPAGVGIPEIQNNDLVFYINQDQDNSFLNKSNDENNIDMEHYSESTDPLNNNANISDEENILADNLVQFYSKDENDDLDLNLDEDDDEDMFFLNDDILNDEFNKKMKKKKKNNNDINKNGSVSKIYTPKHAPLYGEQNIPNNINQAHYLQSKLKYISPEDEMIFKFISEKTFKKYENYVTQFIDNYFKERDCNTNYQIKKEPHELEKNFADWMISGTPSPFKIKKEEINNSSYIFEGETKFDESYIQEMNNNDEEQTQRSRKGRKSHGDDLTEFQSVNKKKKTNMEYSNESDTNILNNKSNYNYENEKCINEYYETFFIPKNLKENNFHDNDKQLYYLITILDEIHYVFYKLFDDFKANKINEKNEDSKIYNYFLRYPIVRTILREFRKKIFNNCTFNISHLPDDIQRSDFIDNIIKLGGIINNNNYSHKLTINNPLKTESAEKEKYTNLMLIERALYTWKFPDAKYYDMSTWKQPYRNFWDVLEYEEKNYKI
SIO_010081: PCHAS_1211800
subclass of: SO_0000673
so part of: PCHAS_1211800
location: join(391354..394798,394949..395150,395300..395399)
location: region:391354-395399:1
so has part: feature:391354-394798:1:exon
so has part: feature:394949-395150:1:exon
so has part: feature:395300-395399:1:exon

XP_016654200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391354-394798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394949-395150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395300-395399:1:exon

PCHAS_1211900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1211900
old locus tag: PCHAS_121190
so part of: sequence
location: <396212..>398473
location: region:396212-398473:1
so has part: feature:396212-398473:1:exon
subclass of: SO_0000010

3491685
type: Gene
SIO_000068: ncbigene

position:396212:1
position: 396212
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:398473:1
position: 398473
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396212-398473:1:exon

PCHAS_1211900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1211900
old locus tag: PCHAS_121190
product: conserved Plasmodium protein, unknown function
transcript id: XM_733548.2
SIO_010081: PCHAS_1211900
subclass of: SO_0000673
so part of: PCHAS_1211900
location: <396212..>398473
location: region:396212-398473:1
so has part: feature:396212-398473:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:396212-398473:1:exon

PCHAS_1211900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1211900
old locus tag: PCHAS_121190
note: tmhmm; query 1-754; ;query 464-482; ;query 444-463; ;query 483-505; ;query 1-443; ;query 506-753
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MRLSGIRRKVDPLLIVSKRLPSYLKKEKINLSKTSKNNNDNSNKFNKKHVKYNQIPAFVQDIIKFTKKNKYNYETDDVSIDKNKIIYFNNLLNEIEKNKNVLTSTLIHDIYQCLYKLNYLKIDIICNLFSILINNTIDFSNLKGYVNCNFKELINITQYLYHFQNICKKNIHSILYNNKEYYNLKVVQRFVKENGDNINFDNNSYKNIIYTNIYNYIAKYDQAENIDILLHSIIKANNHSNRKGEKQIGEIPSQSDGLPMGLNTQCQHSDQIKILEKNCPIKCGIIESSDCSNNVYTEEDSKKIESSNLLSYTHSNAKSVKEGEEEFLIEYINSFYKLNDMFTFILNKVLNYFNENTNLFDFYNLKLLFFYLGKYKKFDINLIEKISNKLIEEIENIKTNHKLVSDNNAFEENKKYNYANNNQRKKKKKKYINTFSKIDSKEFLIIPYTIGVSMNTHFNNYLIEYVNIYILSLINSRINCDVVNIIYCLVGYKYIMIIFFIMFNIFKFKEKTMQDINYLNKYNTFLKRIIKNKVNISQIYSEKLNIISEKENEFAHNINGTSPNPNAHKKVEAFFENELYNYENEMNNNCRLEKNNFNLKNQEENANKNINQNNNINNHNCSRNIKIDPNINDLINPDYVFNFLLKEFEINVNKISLINTNKNSLNYSYDSKQLEEFYIYYKNIFYKVYHYSIFLLNKYDIKDMLKIYQNLKSISLNDDIINNIYTEVLCDKITLNSPNNQNASSLINIISGK
SIO_010081: PCHAS_1211900
subclass of: SO_0000673
so part of: PCHAS_1211900
location: 396212..398473
location: region:396212-398473:1
so has part: feature:396212-398473:1:exon

XP_738641.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396212-398473:1:exon

PCHAS_1212000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1212000
old locus tag: PCHAS_121200
so part of: sequence
location: complement(<399382..>400613)
location: region:399382-400613:-1
so has part: feature:399382-400613:-1:exon
subclass of: SO_0000010

3489491
type: Gene
SIO_000068: ncbigene

position:399382:-1
position: 399382
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:400613:-1
position: 400613
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399382-400613:-1:exon

PCHAS_1212000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1212000
old locus tag: PCHAS_121200
product: autophagy-related protein 18, putative
transcript id: XM_016798835.1
SIO_010081: PCHAS_1212000
subclass of: SO_0000673
so part of: PCHAS_1212000
location: complement(join(<399382..400394,400484..>400613))
location: region:399382-400613:-1
so has part: feature:400484-400613:-1:exon
so has part: feature:399382-400394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:400484-400613:-1:exon

position:400484:-1
position: 400484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:399382-400394:-1:exon

position:400394:-1
position: 400394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1212000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1212000
old locus tag: PCHAS_121200
note: term=annotation;date=20120807;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=autophagy-related protein 18, putative;qualifier=added_literature=pmid:21453511;qualifie r=added_gene_name=atg18;curatorName=ucb@sanger.ac.uk; term=annotation;date=20171103;qualifier=added_literature=P MID:29089429;qualifier=added_GO:0031410;qualifier=added_GO :0032266;curatorName=ucb@sanger.ac.uk; ;query 354-354;GPI_cleavage_site_score=0.2924; iprscan;InterPro:IPR036322 : WD40-repeat-containing domain superfamily;Superfamily:SSF50978; score=7.5E-24;query 11-360;description=WD40-repeat-containing domain superfamily; iprscan;InterPro:IPR001680 : WD40 repeat;SMART:SM00320; score=0.0058;query 187-227;description=WD40 repeat; iprscan;InterPro:IPR001680 : WD40 repeat;SMART:SM00320; score=14.0;query 230-271;description=WD40 repeat
codon start: 1
product: autophagy-related protein 18, putative
translation: MVSLRLDNNRYIAFNQDYGCLCMANEKGFKIYNTNPFTQTYSRDLTDRNKNGLYIAEMLYRCNILAITGNKNDRKGKWAKNVLIIWDDRQMREIAKLTFSSNIIGVRLLREIIVVILEYKLCIYRLKDIILLETLNTAKNPSGLCCLSNIDKNIIIAYLSPIKGRVNIHIFEKNASENVHEELPYINFKTDLSIYAHDNPIACINLSNDGKLLVTASTKGTIIRLFNTFDGSILNEFRRGTKNAKILSLNISNDNNWLCLTSNRNTVHVFSIYKRARPPRKVDIISKGKNISSHVMLNYEKEPKNKKSSIKCLLPCHPYLNSDWSFSSYKIPGKKISSICAFVSDQNCIIVICSNGLIYKLRFNEHIGGEMLKISSHSFD
SIO_010081: PCHAS_1212000
subclass of: SO_0000673
so part of: PCHAS_1212000
location: complement(join(399382..400394,400484..400613))
location: region:399382-400613:-1
so has part: feature:400484-400613:-1:exon
so has part: feature:399382-400394:-1:exon

XP_016654201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400484-400613:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399382-400394:-1:exon

PCHAS_1212100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1212100
old locus tag: PCHAS_121210
so part of: sequence
location: <402486..>404603
location: region:402486-404603:1
so has part: feature:402486-404603:1:exon
subclass of: SO_0000010

3493232
type: Gene
SIO_000068: ncbigene

position:402486:1
position: 402486
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:404603:1
position: 404603
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402486-404603:1:exon

PCHAS_1212100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1212100
old locus tag: PCHAS_121210
product: zinc finger protein, putative
transcript id: XM_016798836.1
SIO_010081: PCHAS_1212100
subclass of: SO_0000673
so part of: PCHAS_1212100
location: join(<402486..402564,402685..402751,402883..402977,403198..>404603)
location: region:402486-404603:1
so has part: feature:402486-402564:1:exon
so has part: feature:402685-402751:1:exon
so has part: feature:402883-402977:1:exon
so has part: feature:403198-404603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:402486-402564:1:exon

position:402564:1
position: 402564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:402685-402751:1:exon

position:402685:1
position: 402685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402751:1
position: 402751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:402883-402977:1:exon

position:402883:1
position: 402883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402977:1
position: 402977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:403198-404603:1:exon

position:403198:1
position: 403198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1212100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1212100
old locus tag: PCHAS_121210
note: term=structural;date=20110407;qualifier=method_exon =changed gene model, shortened first exon based on homology;curatorName=ucb@sanger.ac.uk; term=annotation;date=20120708;qualifier=removed_product=co nserved Plasmodium protein, unknown function;qualifier=added_product=zinc finger protein, putative;curatorName=ucb@sanger.ac.uk; term=annotation;date=20160811;qualifier=added_GO:0071944;q ualifier=added_literature=pmid:27503796;curatorName=ucb@sa nger.ac.uk; ;query 519-548; ;query 496-518; ;query 1-495; tmhmm; query 1-549; iprscan;InterPro:IPR008974 : TRAF-like;Superfamily:SSF49599; score=1.05E-10;query 90-163;description=TRAF-like; iprscan;InterPro:IPR001841 : Zinc finger, RING-type;Prosite:PS50089; score=9.126;query 30-68;description=Zinc finger, RING-type; iprscan;Superfamily:SSF57850; score=2.52E-9;query 22-77;description=null
codon start: 1
product: zinc finger protein, putative
translation: MSVLPLFHICSSFQLNNCLDPKSVYENFICSVCLDLCDTPVTTACNHICCYKCMYYSLLHRRICSICKKVIKYDELKKISGKLKKEYGQLRIKCSLCNEKIRMKNHKKHLSVCKYKKCKNYILGCEYFNEKDKVEIHEEKCEHRLINCSSCSNLFHYKNIVFVLSLKDKYELNIRSPYTYYSYYYNLLLNTNFNFFSYNYSINKNILSNSYISRKIQIFKKLQSNLDRHIFSINDKNRIPLPINRNIPLNVCNHNTHHRTNNTNHITNREHKIVVENNINANNNSPNLPEGESNIPNTQSASNRNTHPPINNNTNNFSITTFLRNNADFESDIANGIGEANIEVVSNFSDSIGIRRFADINRFNDGDHNYIDNNNFIRDYSDVERIGEKKYLCGEYHMREKNRHLENHISNCSSEDSSNEESSAEEYLDILPLRKTYNFNEKNSKDTLIIIKEIFQFDNVDLSSIYIDNKDIFLCNKKCFINTIKNLKDELEKSLTLLYFSCCVGMPIMFSLGYMSFLTTKGVFKLSFLITTTLINLSRRIFNNLFKH
SIO_010081: PCHAS_1212100
subclass of: SO_0000673
so part of: PCHAS_1212100
location: join(402486..402564,402685..402751,402883..402977,403198..404603)
location: region:402486-404603:1
so has part: feature:402486-402564:1:exon
so has part: feature:402685-402751:1:exon
so has part: feature:402883-402977:1:exon
so has part: feature:403198-404603:1:exon

XP_016654202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402486-402564:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:402685-402751:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:402883-402977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403198-404603:1:exon

PCHAS_1212200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1212200
old locus tag: PCHAS_121220
so part of: sequence
location: complement(<405482..>409186)
location: region:405482-409186:-1
so has part: feature:405482-409186:-1:exon
subclass of: SO_0000010

3490835
type: Gene
SIO_000068: ncbigene

position:405482:-1
position: 405482
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:409186:-1
position: 409186
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405482-409186:-1:exon

PCHAS_1212200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1212200
old locus tag: PCHAS_121220
product: U3 small nucleolar RNA-associated protein 13, putative
transcript id: XM_016798837.1
SIO_010081: PCHAS_1212200
subclass of: SO_0000673
so part of: PCHAS_1212200
location: complement(join(<405482..406876,407072..>409186))
location: region:405482-409186:-1
so has part: feature:407072-409186:-1:exon
so has part: feature:405482-406876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:407072-409186:-1:exon

position:407072:-1
position: 407072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405482-406876:-1:exon

position:406876:-1
position: 406876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1212200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1212200
old locus tag: PCHAS_121220
note: term=annotation;date=20150605;qualifier=removed_pro duct=U3 snoRNA-associated small subunit rRNA processing protein, putative;qualifier=added_product=u3 small nucleolar rna-associated protein 13, putative;qualifier=added_literature=pmid:26043001;qualifie r=added_gene_name=utp13;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF00400.28; E()=0.043;score=14.6;query 691-719;description=WD40; pfam_scan;Pfam:PF00400.28; E()=0.013;score=16.2;query 578-611;description=WD40; pfam_scan;Pfam:PF08625.7; E()=2.4E-7;score=30.7;query 1052-1154;description=Utp13; iprscan;InterPro:IPR013934 : Small-subunit processome, Utp13;Pfam:PF08625; score=5.4E-7;query 1054-1152;description=Small-subunit processome, Utp13; iprscan;InterPro:IPR036322 : WD40-repeat-containing domain superfamily;Superfamily:SSF50978; score=3.3E-21;query 171-657;description=WD40-repeat-containing domain superfamily; iprscan;InterPro:IPR036322 : WD40-repeat-containing domain superfamily;Superfamily:SSF50978; score=1.81E-47;query 553-852;description=WD40-repeat-containing domain superfamily; iprscan;InterPro:IPR017986 : WD40-repeat-containing domain;Prosite:PS50294; score=27.737;query 579-853;description=WD40-repeat-containing domain; iprscan;InterPro:IPR019775 : WD40 repeat, conserved site;Prosite:PS00678; score=1.0;query 643-657;description=WD40 repeat, conserved site; iprscan;InterPro:IPR019775 : WD40 repeat, conserved site;Prosite:PS00678; score=1.0;query 598-612;description=WD40 repeat, conserved site; iprscan;InterPro:IPR001680 : WD40 repeat;SMART:SM00320; score=7.3;query 212-249;description=WD40 repeat; iprscan;InterPro:IPR001680 : WD40 repeat;SMART:SM00320; score=7.8E-5;query 681-720;description=WD40 repeat; iprscan;InterPro:IPR001680 : WD40 repeat;SMART:SM00320; score=200.0;query 764-802;description=WD40 repeat; iprscan;InterPro:IPR001680 : WD40 repeat;Pfam:PF00400; score=0.0052;query 577-611;description=WD40 repeat; iprscan;InterPro:IPR001680 : WD40 repeat;SMART:SM00320; score=1.3;query 805-844;description=WD4…
codon start: 1
product: U3 small nucleolar RNA-associated protein 13, putative
translation: MSIISSMEIDRKHSDFYDGDNNVYYSKEYELFLSLCNNNIYCFKVNDQKNAKSQSLYNVMYPTLVLESCIDIDDIKEDHNKKYSNKNCISLFNSIGHFYYSDKNVFLSTDDNNIHHYILVPNNLKEENNENENDEKDVNDESTEKNIYLYDYENGEDEKVYSYSYNWIYLKQKKIWKTNNINISCFSYNNIKYKKLIVGYINGLINVYNLNTYKLAFSYKIHNSRITNLRMYKHFIISSDITKNIFIYDIDKKEKVISCEDHMSGIVDFLFLAIKSGNDQIKIEAQNMDEENVDKEYEEEENEDEEENDEGEGDEEKDEDEDEEENDEGEEETLIGFISIGNDKIMNVWNLSALNLENEEDFDQLKNEQNNINASSNKKRKNKKNSNMITQSPIKQIYLANDINNAIIVPSNIFKNNKSKLSIEDDNIKWLILTHNNSGDLIFYNPLKGNIIYKFKENKYLINESNVIKLVLLKHKLYIFREDSSILIYDIRSFRLIKIYACKLEGIFEMIFFNPNPKPIINDEYSKSSDEDEGSINLKYDAETFESDSIMKNKCAILIGDNIIRILNFEDNLISQKLLIGHEDVVSCIKISERNLLLFSGSNDKNIFVWNLKNNNCLYILKDNLYTINAIDVNLKKFPKILLVSVCEDSSLKLWNFSFNLDNLKDNKKKRKIDQIYDNEVVKSNFTIYPHKAMINDVTISRNSKMIATCSKDKTIKLFEANTLKLISSLEGHTKSVQNICFSRTSNLLYSSTYESIRIWDMSTYQCLKNIQSLDFNITKMLILNDNCMINGYSNGNISIINIKNSEKLSTVNYHDDKIFCLQSYNNNNEIVSSSINGDLIFFKNVSEKKVSENIYEKKKNIYYENCLENLLKENKINESLLICLKLNKKFKFKTIIENYLNSYTFNILNILKQFEYEYGIRRIMDRTNNNSNSIPIKKETNYYKDEEMPNKLLNPNSQKSNLSIDNSNIDSINTNMEENKLKNLYYDDSKITNIQNHLENADILEKYIYTKLSELESEKLVNNGNNVTKESTAMFKDHDQKKINESHFSKQVKEEDENNDENFVMFLKKMKATSEHSYFLYLNKLMDFISFFVMNHRFAYIANFLLNSLIKYISYSDICKINNYQRFFDIYNSYIPRHRNRYLKDLQKSKCFELININYYKGDIKMMN
SIO_010081: PCHAS_1212200
subclass of: SO_0000673
so part of: PCHAS_1212200
location: complement(join(405482..406876,407072..409186))
location: region:405482-409186:-1
so has part: feature:407072-409186:-1:exon
so has part: feature:405482-406876:-1:exon

XP_016654203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407072-409186:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405482-406876:-1:exon

PCHAS_1212300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1212300
old locus tag: PCHAS_121230
so part of: sequence
location: <413009..>415525
location: region:413009-415525:1
so has part: feature:413009-415525:1:exon
subclass of: SO_0000010

3489384
type: Gene
SIO_000068: ncbigene

position:413009:1
position: 413009
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:415525:1
position: 415525
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413009-415525:1:exon

PCHAS_1212300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1212300
old locus tag: PCHAS_121230
product: conserved Plasmodium protein, unknown function
transcript id: XM_731288.2
SIO_010081: PCHAS_1212300
subclass of: SO_0000673
so part of: PCHAS_1212300
location: <413009..>415525
location: region:413009-415525:1
so has part: feature:413009-415525:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:413009-415525:1:exon

PCHAS_1212300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1212300
old locus tag: PCHAS_121230
note: query 822-822;GPI_cleavage_site_score=0.15599999
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MSSIDELNNDENKICHHNLRKNRKPRNYDFEYYEDALNKPRRRRRGRKRGRKPHSVLDKMNKKLNSMGLEDGKSQYIRRRQKDSITFEQNDLDPNRNNDYLINNNIFTSEKLINDQPPKRRGRKRKNFNLLNTNIPLRSNNLKIDRICEYLSYNTNTTWKYMGSTVKFRLINDQQEKYIFLKNMKKHIIFEIIKIAMFALLKININDNNIYALNDIANKKNDNIKICKNENVIIDSIEENDNKVIQKLNSNNSMSQNKSINNDCNDNKNNINSEFPETSGSDIPKIYINNVSNNHRKNSTGSNENNIDNNDEQTVRHNSIENIVMAFGDINYNSSKQEIINRLEDKNDILNQGVTVSEILDFVKEKYEKYYENVKQYIVTTLNIYCALNMFKLIRRGRYTICKYVNFNIFKIKYFKKYYKFFYTLKGEEEVLMNVKNYLKSFYYDKTKSELIGNSSYSRSRANSCNKNSNEMNWDGQIPIKKTRKRRSKSQILANNEIALKKESIDPSTTLIDSKESVQNIKEEAPSGDNIPAVDSINTKKEIQVNENINNVSPITNEDPTGPIKNTNTVEADSSNQPQVTNENAITKEACGENEEKEVKVPKRTRAPRAPRNSRSCGANKIKHININLKNVNIKCIRVAYGIKHFFCSYDAIEKSYDDFEIINISKKYGTLRNSIVNMNLRYNFLYNSKRLLNNYMANNTNASNNTPSMVLSNNNNNNMNLNRDSQILKHSQYGKKKKSISENDSTKHEKYNYLNFNISYKTLRKKLMCLRYVNPIKREERVHRPRNELKQTKEKVLTINDDHLVQTYSINSNFSNIVSVDGLSSMNFESVCSQKSQ
SIO_010081: PCHAS_1212300
subclass of: SO_0000673
so part of: PCHAS_1212300
location: 413009..415525
location: region:413009-415525:1
so has part: feature:413009-415525:1:exon

XP_736381.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413009-415525:1:exon

PCHAS_1212400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1212400
old locus tag: PCHAS_121240
so part of: sequence
location: complement(<416321..>418126)
location: region:416321-418126:-1
so has part: feature:416321-418126:-1:exon
subclass of: SO_0000010

3487580
type: Gene
SIO_000068: ncbigene

position:416321:-1
position: 416321
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:418126:-1
position: 418126
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416321-418126:-1:exon

PCHAS_1212400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1212400
old locus tag: PCHAS_121240
product: conserved Plasmodium protein, unknown function
transcript id: XM_729505.2
SIO_010081: PCHAS_1212400
subclass of: SO_0000673
so part of: PCHAS_1212400
location: complement(<416321..>418126)
location: region:416321-418126:-1
so has part: feature:416321-418126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:416321-418126:-1:exon

PCHAS_1212400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1212400
old locus tag: PCHAS_121240
note: tmhmm; query 1-602; ;query 596-601; ;query 573-595; ;query 1-572
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MKVKASKFVYLQKIVFLVLAFFVLNHELFVEGTYETKGYPLIHLSNNNENIGSVNNLVKNNLINVLSLYENVKIEGNEAAIDNIAKLEDETKVESIIKGKIQYINKNANSKYMIKYSGFINLYEMIHDHNIYFLIHFLTKNMSGGLVIILPENLYIDRNEYFKINNIEPKKFANVTNDVLEKRILFAQKVLLNLKLNQAIYFVINNKEVENIYKNYTSKFSTFDLTRNVSVVPVSNAMSIKKLNSKSLYYFLSNDSININTIFNQKQSDEIFLLTKKKTIVITLDYNVFNVISDFASHTTSKNSGIILMNELISLFTQVYKKEDINYNILFFFSNYYYGIDNFIDSLNQVFKENIEFVICLDDFNEANAFLHQADQAKKQNYLSRFYDILKKKIQSNFKTELKIKKNKIKINNKHLPNIHEYFVLKNLNSFTLSSKNNNSTFLAKTPLLENKLKTDNIRKHAKALFEALYTYIKPNMKPSENEKEIEYNTTAYTNNIKNNEEINTIDHNLNKYNKFFLYKDDIVKLFNYIKTLINPQDTNNNYLVTDFIIPVDKTLKYTYQTHSKITFYMVISYLFHYIHFIIVGILTYILYIFIKYQNPK
SIO_010081: PCHAS_1212400
subclass of: SO_0000673
so part of: PCHAS_1212400
location: complement(416321..418126)
location: region:416321-418126:-1
so has part: feature:416321-418126:-1:exon

XP_734598.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416321-418126:-1:exon

PCHAS_1212500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1212500
old locus tag: PCHAS_121250
so part of: sequence
location: complement(<419259..>422872)
location: region:419259-422872:-1
so has part: feature:419259-422872:-1:exon
subclass of: SO_0000010

3486322
type: Gene
SIO_000068: ncbigene

position:419259:-1
position: 419259
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:422872:-1
position: 422872
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419259-422872:-1:exon

PCHAS_1212500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1212500
old locus tag: PCHAS_121250
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798838.1
SIO_010081: PCHAS_1212500
subclass of: SO_0000673
so part of: PCHAS_1212500
location: complement(join(<419259..419320,419424..419537,419655..420135,420280..420502,420627..420688,420899..420982,421108..421290,421374..421481,421613..421687,421793..421893,422014..>422872))
location: region:419259-422872:-1
so has part: feature:422014-422872:-1:exon
so has part: feature:421793-421893:-1:exon
so has part: feature:421613-421687:-1:exon
so has part: feature:421374-421481:-1:exon
so has part: feature:421108-421290:-1:exon
so has part: feature:420899-420982:-1:exon
so has part: feature:420627-420688:-1:exon
so has part: feature:420280-420502:-1:exon
so has part: feature:419655-420135:-1:exon
so has part: feature:419424-419537:-1:exon
so has part: feature:419259-419320:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:422014-422872:-1:exon

position:422014:-1
position: 422014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:421793-421893:-1:exon

position:421793:-1
position: 421793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421893:-1
position: 421893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:421613-421687:-1:exon

position:421613:-1
position: 421613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421687:-1
position: 421687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:421374-421481:-1:exon

position:421374:-1
position: 421374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421481:-1
position: 421481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:421108-421290:-1:exon

position:421108:-1
position: 421108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421290:-1
position: 421290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:420899-420982:-1:exon

position:420899:-1
position: 420899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420982:-1
position: 420982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:420627-420688:-1:exon

position:420627:-1
position: 420627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420688:-1
position: 420688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:420280-420502:-1:exon

position:420280:-1
position: 420280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420502:-1
position: 420502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:419655-420135:-1:exon

position:419655:-1
position: 419655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420135:-1
position: 420135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:419424-419537:-1:exon

position:419424:-1
position: 419424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419537:-1
position: 419537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:419259-419320:-1:exon

position:419320:-1
position: 419320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1212500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1212500
old locus tag: PCHAS_121250
note: term=structural;date=20110204;qualifier=method_exon =changed gene model, changed coordinates of exon 6, added exon 7, 10 and 11 based on homology;curatorName=ucb@sanger.ac.uk
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MNKENTEKLIKIINLLDKLCEYNEGKTEGCKRLKPLVSSEISKTFNSLEYNKSLFPLNYEQNSLNSNTNKIINEIKKSKTLFFSNKSNSNEKNKLSYKKIITGCKDDNTNVDTDAIDRENSELGNNFVKNTKDYMEYAENENTPININHNNDLTKKPSYDSKFNSISKKIIIDIKNNYVLGDDSNYDNNLSIYSSSNCMVPIYKWHTYNLMSKKKALNMLKGNLSDSELIAFNNSNENKKRIMEMIKHKKKIVKYTDKILNEDSLESSGQIVHLRKCNHISLEIDQDNDIDQKHTQQMLENIIHKLNTNINGVINRYKNKINVLNRSNANLSRKLEDAVEHNDDQVQEIRDLNKIITEMKGEKIEMNKIIEGYEFDINKSKKLIKEEESNEKQKNILEREIKNLRKELNIVNSLNDKIKDEQLLLQEKIQKKNKKINTTKHKIRASNASVVEKNEIPLPLEPKDTACKSYEVQNEKQKTIPFKVKKDIINRYRSDTILDNYLRIKNRLLESNEKCYFLSKTNFELFKGLKKKKKKIDSLNKKIAYLKKFATDMKKVETPYLHLAKEEPNSSIIKTKVGYLSPSKYEPNVKISRKRKSLVQLYNTNQSFEVDNNRDKKVEGIKKLLKNLNNENNLLKNKYEMLYKKYIRLLKKLRENKEFTFIEEKKIKTTKEIFPESDVIHYFYLKPKDADIRKKHSQDNKIGNCIKVEAVDKTKHNPLQYRNYKDDENYSDVEFYISNEFLKRMDVKDILNIRYIYSYGDINRRTTTFSEKGCTPNYYNCVW
SIO_010081: PCHAS_1212500
subclass of: SO_0000673
so part of: PCHAS_1212500
location: complement(join(419259..419320,419424..419537,419655..420135,420280..420502,420627..420688,420899..420982,421108..421290,421374..421481,421613..421687,421793..421893,422014..422872))
location: region:419259-422872:-1
so has part: feature:422014-422872:-1:exon
so has part: feature:421793-421893:-1:exon
so has part: feature:421613-421687:-1:exon
so has part: feature:421374-421481:-1:exon
so has part: feature:421108-421290:-1:exon
so has part: feature:420899-420982:-1:exon
so has part: feature:420627-420688:-1:exon
so has part: feature:420280-420502:-1:exon
so has part: feature:419655-420135:-1:exon
so has part: feature:419424-419537:-1:exon
so has part: feature:419259-419320:-1:exon

XP_016654204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422014-422872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421793-421893:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421613-421687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:421374-421481:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:421108-421290:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420899-420982:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420627-420688:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420280-420502:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:419655-420135:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:419424-419537:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:419259-419320:-1:exon

PCHAS_1212600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1212600
old locus tag: PCHAS_121260
so part of: sequence
location: <426952..>431391
location: region:426952-431391:1
so has part: feature:426952-431391:1:exon
subclass of: SO_0000010

3489568
type: Gene
SIO_000068: ncbigene

position:426952:1
position: 426952
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:431391:1
position: 431391
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426952-431391:1:exon

PCHAS_1212600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1212600
old locus tag: PCHAS_121260
product: phosphoinositide-specific phospholipase C, putative
transcript id: XM_016798839.1
SIO_010081: PCHAS_1212600
subclass of: SO_0000673
so part of: PCHAS_1212600
location: join(<426952..430757,430889..430967,431110..431171,431292..>431391)
location: region:426952-431391:1
so has part: feature:426952-430757:1:exon
so has part: feature:430889-430967:1:exon
so has part: feature:431110-431171:1:exon
so has part: feature:431292-431391:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:426952-430757:1:exon

position:430757:1
position: 430757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:430889-430967:1:exon

position:430889:1
position: 430889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430967:1
position: 430967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:431110-431171:1:exon

position:431110:1
position: 431110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431171:1
position: 431171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:431292-431391:1:exon

position:431292:1
position: 431292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1212600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1212600
old locus tag: PCHAS_121260
note: term=annotation;date=20110428;qualifier=removed_pro duct=phosphoinositide specific phospholipase c, putative;qualifier=added_product=phosphoinositide-specific phospholipase c, putative;qualifier=added_gene_name=pi- plc;curatorName=ucb@sanger.ac.uk; ;query 1332-1332;GPI_cleavage_site_score=0.59159994; pfam_scan;Pfam:PF00387.15; E()=9.2E-32;score=109.5;query 940-1047;description=PI-PLC-Y; pfam_scan;Pfam:PF00388.15; E()=6.9E-42;score=142.3;query 586-729;description=PI-PLC-X; pfam_scan;Pfam:PF12814.3; E()=1.7E-24;score=86.1;query 89-203;description=Mcp5_PH; iprscan;InterPro:IPR000909 : Phosphatidylinositol-specific phospholipase C, X region;Pfam:PF00388; score=6.6E-42;query 586-729;description=Phosphatidylinositol-specific phospholipase C, X domain; iprscan;InterPro:IPR000909 : Phosphatidylinositol-specific phospholipase C, X region;SMART:SM00148; score=8.4E-37;query 584-729;description=Phosphatidylinositol-specific phospholipase C, X domain; iprscan;InterPro:IPR000909 : Phosphatidylinositol-specific phospholipase C, X region;Prosite:PS50007; score=35.464;query 584-729;description=Phosphatidylinositol-specific phospholipase C, X domain; iprscan;InterPro:IPR017946 : PLC-like phosphodiesterase, TIM beta/alpha-barrel domain;Superfamily:SSF51695; score=1.07E-89;query 584-1048;description=PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily; iprscan;InterPro:IPR001192 : Phosphoinositide-specific phospholipase C, C-terminal (PLC);PRINTS:PR00390; score=5.1E-24;query 984-1005;description=Phosphoinositide phospholipase C family; iprscan;InterPro:IPR001192 : Phosphoinositide-specific phospholipase C, C-terminal (PLC);PRINTS:PR00390; score=5.1E-24;query 615-635;description=Phosphoinositide phospholipase C family; iprscan;InterPro:IPR001192 : Phosphoinositide-specific phospholipase C, C-terminal (PLC);PRINTS:PR00390; score=5.1E-24;query 1005-1023;description=Phosphoinositide phospholipase C family; iprscan;InterPro:IPR001192 : Phosphoinositide-specific phospholipase…
codon start: 1
product: phosphoinositide-specific phospholipase C, putative
translation: MNLNENISQNGFNNTIQEDEDSMGLMSEGFDGSGNEGYRENEIKNYRKEKYEGNKNANTHESLLKNNKDNIDTKLGFDIRNVLRHAYLPVCIEKMKEGEYVYKWNNNNIFQKKTLKFVYLDTNNYCIRWNSKKKKLKENKNLSLYICDIIKILDGSESPFFKKKEEEKSLSIEIISIDRSLRITFLDIQRWKMWLFGLMYYHYKLVNKSSRERKKLKPFIYESNKLYDNYIISGLKDINVLTLSQLYIILRSLNIYINMKILYHYFSIYKNKGTINYYGFTKILEHIFSNNHISIHFNMYKNNDTNYIDKNQFINFLVDIQCEGKSEERIFRIHKKDNSTRLIPDQVGQNEVKKKEDNKTQNWNNNEMDTNQHIVKDNQQIKEKNEHNISENISNDNKISENNSMFDEIANGYNLDYCEWQNLMKTLDVSDNQNEHNLQCNANIELNNFMISDHTKQYDKDYTMILNVLKDKYGISSTTSYYDEFNRNSHNKSEKEYKRETYTYEENDGKEQTNEISKEDKNKDDFYFIQTNIIYKSLNTIKKYNIPFVITNEGNHYLTQIGLVYFLLSKENSIMCPEYAKVYQNMNLPLCNYWINSSHNSYLGRKQIFSESSIEQYIYILIDGCRCVEFDCYYFNKNIVVYHGLYGYKLTSSILFCDTLIACKMFGFSTSPYPIILSLEIHCKNKHKNLIAKILIYILGNQLYIPKTKDEINNITPNNCRNKFLVKYKHFDNNDTSSFYNIFEGLKSVMYDELGYFSDIINEEEPINVDESKEYGMIEKNHEKHNKISIENQNLESENQVNNYIEQNNSNHTNYKNNEVQKKNKNSDENNMWGNENVAQRDLHEMDSNYSSSSSSKYLYEKDIIHKTQIDEKHRKQANFLNNNSGFDNSSTPNNISTSDAVTNCSKNVSEGSHMLKEEDKKKQDNEKYKNNVLNKCSCLKGYVFRSLQENRTYNEICSISENKFIKLIKKNEDDVIKYNQKTLMRVYPSGTRLASTNFNPIIFWSAGIQFVALNYQYNGLSMLLNKGRFLENGGKHSGYILKPELLRFNKKHDYDILSLNIQILSLHQINLLFSIKNKYQEKKLKKELFKMDMIQRIQTHKKISNKRKKFKYLQKLEREKKNTLLSDIQSDDSKKKKKISDETLLKKFKDNDNDVNYIHKKFAHIEKEYEDMLTEYKSFLLCSTLSHSSSFNSCSSVTTTSNNTTDSNKKVSSKSKKKNFYQAFLELKKANNLFFYLYVTISIHGYNEQKCYFKTEIAKVNFYDINYCWPKPSNFQMKIMHPSLALIVFELKSYDTVKSEIIACACFPVKCLREGIRFVPLCDKHLKDIKGSGILVNLKFDKTTENI
SIO_010081: PCHAS_1212600
subclass of: SO_0000673
so part of: PCHAS_1212600
location: join(426952..430757,430889..430967,431110..431171,431292..431391)
location: region:426952-431391:1
so has part: feature:426952-430757:1:exon
so has part: feature:430889-430967:1:exon
so has part: feature:431110-431171:1:exon
so has part: feature:431292-431391:1:exon

XP_016654205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426952-430757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430889-430967:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:431110-431171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431292-431391:1:exon

PCHAS_1212700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1212700
old locus tag: PCHAS_121270
so part of: sequence
location: <433243..>439608
location: region:433243-439608:1
so has part: feature:433243-439608:1:exon
subclass of: SO_0000010

3496656
type: Gene
SIO_000068: ncbigene

position:433243:1
position: 433243
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:439608:1
position: 439608
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433243-439608:1:exon

PCHAS_1212700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1212700
old locus tag: PCHAS_121270
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798840.1
SIO_010081: PCHAS_1212700
subclass of: SO_0000673
so part of: PCHAS_1212700
location: <433243..>439608
location: region:433243-439608:1
so has part: feature:433243-439608:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433243-439608:1:exon

PCHAS_1212700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1212700
old locus tag: PCHAS_121270
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MKGLKGNTKMMKCNDNIEDKKKTWLNNLDEKDKSNLKNVGGKSIKNAALTFFKEHNIYNRENIEILNYFCQEKLDDNLVDEEIIEFLQTAFFLFEYFIKVNTFKINKKEFIENVCDCCKRILLKNIIKYEKEILDFLLKNLINFINKYSFSFIYQSLYNIYQYQNKKFRKPNEYRYDNLSFILNIESVTVNNQTLLVNNNEFLADTLLLLDENDEKYIKEKYSTIRGVCEDNNNMNSSNNGSFDIDRQYNFISNDLMSNETGSGELEKDDDKEDDESNDGTGKKTRKRARATRKGNKNNVKTSKKKDTILKQINDDLSNIHKINKTNGNYIIDQEFVCLYMFVFFKGCFDNINFYLIEKFIENYYMNENKENIYKELFLFLFLIYKDKMHNIVNRILTDTIKSLNNSESIDIRTRKKKKINSDDNSLDTNCYISDCLFYYELLISIITYNNLQYENNYEYYINILKLLNENDNFQNLFIHSFFFVYISTKDVNIRSMLLINFVKYHSKKHHNLLKLLSQIKNIFALIYDINSNNIIYNINTFNQMSISDFMCCSNNDELKVKYSYLFHIAENIIIDKYIDLFFKETYYIISRINLNYFCHATNLYLCIYDKIFNKTINIIYENEMNLNDEAFSACKKILKPFLFIYVELFDSLTQKLKKNIFDDKVMFSFSFIKKYLLKNMYERTYLQKDLFGVIYQIYFFIYTLKYKFINFLKIYIETKRNIKDNLEDFLKLKIEYIKTKKTDELEIDQMNYLNMNDDDDFIENAKREIADNNKLACLDQEECSNPKKNSDSDIGDDSNNEDEEDSTDSEYSYSYMYNNKRKNKKENIKSQEKKIKSKKTVNKKDEDKKENNKNDSDEDEEINKNLDEYMLMNIGQGNDLPCNQMEMKKIKIINFFQKHYLLLKYFDSNVEQILEEYCTDETLSKFSSNTCTLEGNNNNIFNGMKDNGNNTKGGNSIGKNKHITVNPEDKIRFIKKLRIFFDKNTTVDEIINSMFINNKDNVYSKILKNNLIIIKEFKNLRLDVIYPIFNASLALLFDDFYFFIIQNIKLVVEEKERCFSDYKIFLNISFILLHMFAKDIKIEKYLVSIFYMLKLSLNKLRSIEIFEENEKESSMDIIYNKDEKAFRNNIKYYNLKKESNIFKNISEEEAGQTSLESKNKDNSSLHKIEEKMQLHQNILYIFLKLLQNILRQNNLYYNFKSIIYDILFSEYSNKKIVFSSLKCVIDRYKLEEVYKYCLTILNSITVEKNHILYNIINNDKVSLLEPKIGHNDSKKDESDDDNNTKSINEQKQTNKSIKQVNKNNTQNYSLNKRKGNKKDQNGISNKSNNMDKENNSEAENETNENNGEKTDGNINKGRNNLLLTILQNTNELKNNIFDPKNGKNPKLSSLYINLLILYYVFSQKAKYKNQKRIYYNCIKTDISNCYNIINKLLCIFYHNYNLNLYYHKYLKFLCLKIFKKIYNLFSIKEVDLYIDFLKKGNKIDDKIYDDKNINDIICLKNEIISFYEYILNEEVEIYTKKNGNKINNKIAISENYKFYFVNNLKCDNIVLKNDNFIFMINSLLFIFNIKYDKITFYKIVSIILMEKPENRNYILEKVISSIKHFFNLSDIYNNLKKTFNKNNQIRLPNYIENHSMLLYIIRTTILIFLLIDYNHINKQDTEKEDYISYNSFKNDYIKKKSIKYYYTQLNLLLFRVFYNEKNIPYFFKIFFSTLYFISFKKSDENIVYFFERVFDHRENNQFSLDKDEKSVDSVIEALANKRQDENAYLSEKSDELESDENIDVGIDNKNIKTKHNAKKNKQNKKYNEKKQPLKNNNKKRKKKSSESESSEETDEEILLEDFKKDYHKILRNKTQKEKAIPNDSNEKKSTNNKNCNNNDKDYKKRAAMIESSEENSSDSDVSYKINLKNNKKKKTNNKKNAQKEDEQKEESNISSSDEQIVKENDNDDESSDVEEKNEEIKKQREIELQAENEMIQNNENPYEQNTHQEMEDPNKIYRS…
SIO_010081: PCHAS_1212700
subclass of: SO_0000673
so part of: PCHAS_1212700
location: 433243..439608
location: region:433243-439608:1
so has part: feature:433243-439608:1:exon

XP_016654206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433243-439608:1:exon

PCHAS_1212800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1212800
old locus tag: PCHAS_121280
so part of: sequence
location: <440200..>441229
location: region:440200-441229:1
so has part: feature:440200-441229:1:exon
subclass of: SO_0000010

3492055
type: Gene
SIO_000068: ncbigene

position:440200:1
position: 440200
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:441229:1
position: 441229
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440200-441229:1:exon

PCHAS_1212800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1212800
old locus tag: PCHAS_121280
product: conserved Plasmodium protein, unknown function
transcript id: XM_733912.1
SIO_010081: PCHAS_1212800
subclass of: SO_0000673
so part of: PCHAS_1212800
location: join(<440200..440444,440603..440833,441118..>441229)
location: region:440200-441229:1
so has part: feature:440200-440444:1:exon
so has part: feature:440603-440833:1:exon
so has part: feature:441118-441229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440200-440444:1:exon

position:440444:1
position: 440444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:440603-440833:1:exon

position:440603:1
position: 440603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440833:1
position: 440833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:441118-441229:1:exon

position:441118:1
position: 441118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1212800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1212800
old locus tag: PCHAS_121280
note: term=annotation;date=20180921;qualifier=added_GO:00 05737;qualifier=added_literature=pmid:30232409;curatorName =ucb@sanger.ac.uk; pfam_scan;Pfam:PF00085.16; E()=7.2E-5;score=22.5;query 64-136;description=Thioredoxin; iprscan;InterPro:IPR036249 : Thioredoxin-like superfamily;Superfamily:SSF52833; score=3.16E-10;query 61-139;description=Thioredoxin-like superfamily; iprscan;InterPro:IPR013766 : Thioredoxin domain;Pfam:PF00085; score=7.5E-5;query 64-136;description=Thioredoxin domain
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MKILIFVLFLIFIKNIICEIRELSFHEFERMLTTNNYHQNKNYILENKINYKKSHAINDYLYLNTDNDFVLYLYAKWDADSNNLITVFREVARIIEEKNLKIPFYTFNVDNAKEFCNSINVTSLPLILYVSSVHKKKYGSLLQKTLISSKDIKIGNAFRYGGDMYCYDYIVEWVEVHHYFSKALLFMKRIFMKRV
SIO_010081: PCHAS_1212800
subclass of: SO_0000673
so part of: PCHAS_1212800
location: join(440200..440444,440603..440833,441118..441229)
location: region:440200-441229:1
so has part: feature:440200-440444:1:exon
so has part: feature:440603-440833:1:exon
so has part: feature:441118-441229:1:exon

XP_739005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440200-440444:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440603-440833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:441118-441229:1:exon

PCHAS_1212900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1212900
old locus tag: PCHAS_121290
so part of: sequence
location: <441954..>443853
location: region:441954-443853:1
so has part: feature:441954-443853:1:exon
subclass of: SO_0000010

3494854
type: Gene
SIO_000068: ncbigene

position:441954:1
position: 441954
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:443853:1
position: 443853
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441954-443853:1:exon

PCHAS_1212900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1212900
old locus tag: PCHAS_121290
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798841.1
SIO_010081: PCHAS_1212900
subclass of: SO_0000673
so part of: PCHAS_1212900
location: join(<441954..442022,442191..442278,442440..443271,443475..>443853)
location: region:441954-443853:1
so has part: feature:441954-442022:1:exon
so has part: feature:442191-442278:1:exon
so has part: feature:442440-443271:1:exon
so has part: feature:443475-443853:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441954-442022:1:exon

position:442022:1
position: 442022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:442191-442278:1:exon

position:442191:1
position: 442191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442278:1
position: 442278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:442440-443271:1:exon

position:442440:1
position: 442440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443271:1
position: 443271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:443475-443853:1:exon

position:443475:1
position: 443475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1212900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1212900
old locus tag: PCHAS_121290
note: query 426-426;GPI_cleavage_site_score=0.152; ;query 428-455; ;query 405-427; ;query 1-404; tmhmm; query 1-456
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MKILYLIILCYITSFRHFHFCLNNNAVENNEGSQILRKRHRKNNKNDLTNVIDFSFINTSKEGNKSEHPEDEKNKNNEHVENKDKQKGKDNHDHEKNENKDKKTDKKKDEDDDDDFDIDDIDDDDDDEADEKKSSKKENNDKNKKTEEKKNDDKKKDDKKKDDKKKEDKKKNKDDDDDDDDNFDEEGGDEEDEDEEDQEDKPPKKNKGNNSKDENIKSKHTENLKAEKKKDKEIKKHKNNEDIDNDHQKENHDNKKDNNNNTSPNNNHHEISHNENNQPKENSNNSNPNHSEQNHNGNIGMPNVVGAMHPIAGANFQKNDNTPITHPINTISSENIIIPEDIKKDFMKLLANVIKLNTKDSPHPSNQFIENNNPMNPLLQNNPNHEHPNNTSFIKSIYYHFKNHLSYYVIGTAVLFILTLIIQASNVSDDDNKKKTKKIKKDRSQISNYRRTVEC
SIO_010081: PCHAS_1212900
subclass of: SO_0000673
so part of: PCHAS_1212900
location: join(441954..442022,442191..442278,442440..443271,443475..443853)
location: region:441954-443853:1
so has part: feature:441954-442022:1:exon
so has part: feature:442191-442278:1:exon
so has part: feature:442440-443271:1:exon
so has part: feature:443475-443853:1:exon

XP_016654207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441954-442022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442191-442278:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442440-443271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443475-443853:1:exon

PCHAS_1213000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1213000
old locus tag: PCHAS_121300
so part of: sequence
location: complement(<444705..>447821)
location: region:444705-447821:-1
so has part: feature:444705-447821:-1:exon
subclass of: SO_0000010

3496043
type: Gene
SIO_000068: ncbigene

position:444705:-1
position: 444705
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:447821:-1
position: 447821
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444705-447821:-1:exon

PCHAS_1213000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1213000
old locus tag: PCHAS_121300
product: translation initiation factor eIF-2B subunit delta, putative
transcript id: XM_016798842.1
SIO_010081: PCHAS_1213000
subclass of: SO_0000673
so part of: PCHAS_1213000
location: complement(<444705..>447821)
location: region:444705-447821:-1
so has part: feature:444705-447821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:444705-447821:-1:exon

PCHAS_1213000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1213000
old locus tag: PCHAS_121300
note: term=annotation;date=20150825;qualifier=removed_pro duct=initiation factor 2 subunit family, putative;qualifier=added_product=translation initiation factor eif-2b subunit delta, putative;qualifier=added_GO:0005851;qualifier=added_GO:000 3743;qualifier=added_GO:0006446;curatorName=ucb@sanger.ac. uk; pfam_scan;Pfam:PF01008.13; E()=1.6E-36;score=125.8;query 366-606;description=IF-2B; iprscan;InterPro:IPR037171 : NagB/RpiA transferase-like;Superfamily:SSF100950; score=1.09E-5;query992-1025;description=NagB/RpiA transferase-like; iprscan;InterPro:IPR037171 : NagB/RpiA transferase-like;Superfamily:SSF100950; score=2.34E-52;query 315-637;description=NagB/RpiA transferase-like; iprscan;InterPro:IPR000649 : Initiation factor 2B related;Pfam:PF01008; score=1.7E-36;query 366-606;description=Initiation factor 2B-related
codon start: 1
product: translation initiation factor eIF-2B subunit delta, putative
translation: MDDKFYLTFSKRKKKKVSGTINKEKFKKNFSKSEKYVKVSILNKNPTKKTLLHTLFKGFVKPCNEKSTIFYSILCIINNIYKCPYFTKHRCLICKPLYYNRLLKLKQEYEDNDKSDDIDDEPIAPLKHNLYYNRRKVDKSGVAKEDKKNDINNISNPSTSNNKFEHINKSNEAISNNCVGKDHSYTCKDKESVKFDTEEKEQGKGVSVQNAKEENEDERDDDDSKIKKNKIKREEIKHDKNEKGENCEESKNTIIYDPLKTNTINNKTKLNLNSNKQNNPSNKTSLFSTCPFPNILSGKLNLSSIQQYNFLLHDNKINYLDLYNFDVFDKTTIYDKILLDLNQNEIHTNILRTGIHFNKYMNTTHNHRNVDLLMALKSFIKDYTLPPYEPINRHMKIVIDKEINYIIMCKKHSISMGEVIRWFKNMVTESIGKHVLEEIKEIIINNINNYIRTKIIIPSINISNYVSEYIIEDGDVLLIYTFDYDIYISMINAKKKGKTFEIFLVDSEPYKNSHNIKLYIKLGIPVTYTLLSSLSYNIKKCTKVLLGIDSIMHNNIYGYAGTSMICMISKVNNVPVYIVCETYKISNKIVIDSFSMNNINNNIDVYDYIYLHHYHNSKHHHNNIPSIRKNDKIVVDSSLEFNKKLNNFIESYPDIKSNQILFSNINDKSYIEATNCLKQNTNCPKPPIIYSSGTPNKFYKKRRKENEKKHNINNICDKNESPKYNDASIKCEHVNNSFEKSNIQSFNDNQSSSLYIENKNDQTSSNVLKKNIFALHEEEKTSLFIKVVKDEKTNTLIMNKNSYEEININKMNKDQISIGENNANQTSSSTSGLKKKETPFFRNTVKDISNERIVSTKSIMKIVDESNDNKKVETINICINHKHNITNVSNDCKNVNKKNKQFYNMKNDKTFYEQKNSYFINFKNYLDMPSSNSNPKIKHSGIEEERTPCNNVCDSICKSIGNLNIKNICIDRHNETNLFSSVLSHIDKIKTNADKSFYVANICNDVTPLNYISYIVTEVGVYTSENKNSLNVFIQNNI
SIO_010081: PCHAS_1213000
subclass of: SO_0000673
so part of: PCHAS_1213000
location: complement(444705..447821)
location: region:444705-447821:-1
so has part: feature:444705-447821:-1:exon

XP_016654208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444705-447821:-1:exon

PCHAS_1213100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1213100
old locus tag: PCHAS_121310
so part of: sequence
location: complement(<449343..>451148)
location: region:449343-451148:-1
so has part: feature:449343-451148:-1:exon
subclass of: SO_0000010

27794956
type: Gene
SIO_000068: ncbigene

position:449343:-1
position: 449343
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:451148:-1
position: 451148
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449343-451148:-1:exon

PCHAS_1213100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1213100
old locus tag: PCHAS_121310
product: GDP-L-fucose synthase, putative
transcript id: XM_016798843.1
SIO_010081: PCHAS_1213100
subclass of: SO_0000673
so part of: PCHAS_1213100
location: complement(join(<449343..449398,449538..449604,449687..449722,449820..449884,449971..450147,450282..450564,450801..>451148))
location: region:449343-451148:-1
so has part: feature:450801-451148:-1:exon
so has part: feature:450282-450564:-1:exon
so has part: feature:449971-450147:-1:exon
so has part: feature:449820-449884:-1:exon
so has part: feature:449687-449722:-1:exon
so has part: feature:449538-449604:-1:exon
so has part: feature:449343-449398:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450801-451148:-1:exon

position:450801:-1
position: 450801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:450282-450564:-1:exon

position:450282:-1
position: 450282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450564:-1
position: 450564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:449971-450147:-1:exon

position:449971:-1
position: 449971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450147:-1
position: 450147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:449820-449884:-1:exon

position:449820:-1
position: 449820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449884:-1
position: 449884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:449687-449722:-1:exon

position:449687:-1
position: 449687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449722:-1
position: 449722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:449538-449604:-1:exon

position:449538:-1
position: 449538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449604:-1
position: 449604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:449343-449398:-1:exon

position:449398:-1
position: 449398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1213100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1213100
old locus tag: PCHAS_121310
note: term=annotation;date=20130327;qualifier=removed_EC_ number=1.1.1.27;qualifier=added_ec_number=1.1.1.271;curato rName=ucb@sanger.ac.uk; term=annotation;date=20130427;qualifier=removed_product=GD P-fucose synthase, putative;qualifier=added_product=gdp-l-fucose synthase, putative;qualifier=added_literature=pmid:23615908;qualifie r=added_gene_name=fs;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF01370.17; E()=5.0E-43;score=147.1;query 6-244;description=Epimerase; iprscan;InterPro:IPR036291 : NAD(P)-binding domain superfamily;Superfamily:SSF51735; score=7.58E-46;query 3-339;description=NAD(P)-binding domain superfamily; iprscan;InterPro:IPR001509 : NAD-dependent epimerase/dehydratase;Pfam:PF01370; score=5.2E-43;query 6-244;description=NAD-dependent epimerase/dehydratase
codon start: 1
product: GDP-L-fucose synthase, putative
translation: MSRTCIITGGTGLLGNSFREVVKSENKDFIETENEIIINSNDKNVIKKYVFLSSKMCNLKNYDDTKNFFEKNKFTDIIHFAAHVGGLYANKNNNLQFLLNNLDINLNIVKICHKYSITRGIFTLSTCIFPEKCDLPLIEENVHDGRCHLSNEGYSTSKRVLEILVRCYREKYNYQWMCIIPTNIYGKYDNFNLENAHVIPSIIHKIYLAKVNNTNVKLMGDGSAIRQFIYNRDISNILYYILNIYYSHNLTIIKDNIYNVIFSTNLPSNELSIKELANKIKHYMEFNNEILFDDTQDNGIHKKTACNDKLMSIINTSFSFTDIDKGLKETIDWFNSEYKNIRK
SIO_010081: PCHAS_1213100
subclass of: SO_0000673
so part of: PCHAS_1213100
location: complement(join(449343..449398,449538..449604,449687..449722,449820..449884,449971..450147,450282..450564,450801..451148))
location: region:449343-451148:-1
so has part: feature:450801-451148:-1:exon
so has part: feature:450282-450564:-1:exon
so has part: feature:449971-450147:-1:exon
so has part: feature:449820-449884:-1:exon
so has part: feature:449687-449722:-1:exon
so has part: feature:449538-449604:-1:exon
so has part: feature:449343-449398:-1:exon

XP_016654209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450801-451148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450282-450564:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449971-450147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:449820-449884:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:449687-449722:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449538-449604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449343-449398:-1:exon

PCHAS_1213200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1213200
old locus tag: PCHAS_121320
so part of: sequence
location: <452043..>455777
location: region:452043-455777:1
so has part: feature:452043-455777:1:exon
subclass of: SO_0000010

3487304
type: Gene
SIO_000068: ncbigene

position:452043:1
position: 452043
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:455777:1
position: 455777
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452043-455777:1:exon

PCHAS_1213200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1213200
old locus tag: PCHAS_121320
product: merozoite surface protein MSA180, putative
transcript id: XM_729232.2
SIO_010081: PCHAS_1213200
subclass of: SO_0000673
so part of: PCHAS_1213200
location: <452043..>455777
location: region:452043-455777:1
so has part: feature:452043-455777:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452043-455777:1:exon

PCHAS_1213200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1213200
old locus tag: PCHAS_121320
note: term=annotation;date=20150821;qualifier=added_GO:00 05737;qualifier=added_literature=pmid:26292257;curatorName =ucb@sanger.ac.uk; term=annotation;date=20170330;qualifier=removed_product=co nserved Plasmodium protein, unknown function;qualifier=added_product=merozoite surface protein msa180, putative;qualifier=added_literature=pmid:28351409;qualifie r=added_GO:0009986;qualifier=added_gene_name=msa180;curato rName=ucb@sanger.ac.uk; ;query 1-4; ;query 5-24; ;query 25-1244; tmhmm; query 1-1245
codon start: 1
product: merozoite surface protein MSA180, putative
translation: MVKIFSFFFVILYFFLISGHNAIHNDQDSTKKAILLALLKNKFIDKKEYRKYDDINNALQYIKNSELNISEINKFENFLSYLLKHHNINATFNDVDTKILYLSGVLNSIYVDLDLLDKDYVDTYFNNNYEQSSNIIKLILRSKVVTPEYINTPSEEGTYEQVNSNLLDEKHEEIHENLEENKKDEHETDEENKIEDQIFDNNEEHKIENLSEEINKINDNIYSFIGKINDEHKMANMENYIKDYPILDDVKTKHPKDNIIINIYNTYFGYVDPNAVENPRKFPNGHPYIGNLNLQIGNNILKDANELNTKFNEKNNYIAYNENKDDIQGFDNKNFKDYNSDNLQNKVLNNEKGYDENIDNKIEDYNNDLYAKGEDEPLTFQYTYENPYYMFALRNTSPNKDKDNDSTSDVNNDNNNENMNEQDNKIDTNNSKDDVNALSDSSRSSNAQKMKLLNDSDDQNDIILNILPNSSENRPVYKRKEFKANKMKTKTDTIDNETLDTIQNSMYVKIGQNGSNNFLSFFEFRELSLNKNFKNLLLFIDYLKIFNTTEAIIFIEKLTQLICLSYCMTITDTLELSNSDMLLYDGMTILFSEKSVDVKINNKIHHIKPQYFKNILALLNINKKTIPLVCPCKSYTNTILSYFKNYGSNARCSFHHYNKPSYLEEFSPYYVLGQLISMQEKFPFIKKNGRTESKLQFNENEESDIYSSIFYHNYRHSQSIKKRKSNTSNKVNNFIDEEKDGINVYYNSSLININDTTDISNVFIDEIKSKVSRINSYKIGKQVFTTYGNYGKDDHDLELKDTIYDPNSSRSKRLNNYANNKNEKTKNDSNKTKKIVQSQLTTNKDDNVSNVEYSSLTNGDDEKDKLMMEFLKLANSTKSKNDVQNVHDKKETETNINKVINAKHLVQFFKGTEIWKPITYCQNIANINRALNNIKYKETITFVEDFNQNQVVLYFSDNAKIPIKISIDYFIFLLEKVSLVNYVEDLCNNFNLKVSSTNNSADSNISSVLSIRLFLEKSIATFGDQFLQRNKYANELYNISTPNMFSSKRDIILKKESYNNIVFNEKDIFDIFSLYLEEVITEKMIEEKFFTPFAFIIHKEDIAAHGKSTLHIYNNENIKRSNKGAINKYMFFGYKNIINNMSDFYSDIMPKVPIKENNLKEYTLVIYSDNPSMTNIVIKTTINVLNIAFLLSILEVVLDTKAEQQFFSYEKKFFPLNSFIILNDDINHLFFNYMPNENGSEYQL
SIO_010081: PCHAS_1213200
subclass of: SO_0000673
so part of: PCHAS_1213200
location: 452043..455777
location: region:452043-455777:1
so has part: feature:452043-455777:1:exon

XP_734325.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452043-455777:1:exon

PCHAS_1213300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1213300
old locus tag: PCHAS_121330
so part of: sequence
location: <457025..>459648
location: region:457025-459648:1
so has part: feature:457025-459648:1:exon
subclass of: SO_0000010

3492641
type: Gene
SIO_000068: ncbigene

position:457025:1
position: 457025
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:459648:1
position: 459648
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457025-459648:1:exon

PCHAS_1213300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1213300
old locus tag: PCHAS_121330
product: male gamete fusion factor HAP2, putative
transcript id: XM_734486.2
SIO_010081: PCHAS_1213300
subclass of: SO_0000673
so part of: PCHAS_1213300
location: join(<457025..457252,457462..>459648)
location: region:457025-459648:1
so has part: feature:457025-457252:1:exon
so has part: feature:457462-459648:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:457025-457252:1:exon

position:457252:1
position: 457252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:457462-459648:1:exon

position:457462:1
position: 457462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1213300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1213300
old locus tag: PCHAS_121330
note: query 771-771;GPI_cleavage_site_score=1.2470001; ;query 1-11; ;query 709-804; ;query 12-29; ;query 686-708; ;query 30-685; tmhmm; query 1-805; pfam_scan;Pfam:PF10699.5; E()=7.8E-17;score=60.8;query 349-397;description=HAP2-GCS1; iprscan;InterPro:IPR018928 : Generative cell specific-1, HAP2-GCS1;Pfam:PF10699; score=6.8E-17;query 349-397;description=Generative cell specific-1, HAP2-GCS1
codon start: 1
product: male gamete fusion factor HAP2, putative
translation: MRNNLINLRSKHIYKFIILLLFCIILKYYKWCDFKNKVFFIQLVYSFAKKSVCTSSSDDSTCHTVTFGELDVSNNSVVRLKVMRKGGKGYFLTIRRDYVTVSYYLKYVKDIPLEFREVIDIFNNHKFEQYTQEQIDKYTYACSVRKIEDIDKYDEKTPAKFHEYTRGEACRCQSYNYFKDDEFIKRAKLKCIYFNMLFTESATVYSRHCAFMDLMHFAVYDIEYPPIFNTTVNITIEEYYYNDVSSVLNNKSDLVTKEKKYQLNDSITEIRDDYFDLWLFLKGETHGKRTLVNLSNDYVVIPSSPIDNKDVIASDITRNCGLSQDSPLLKGCNYSNICDTMHPCLRKAMMLPKYMFDLSGKTCGKLGVSLNTWRKSEGNFCGSEAGYCISNNLKKYYDIHKSASIKDGVSLSKYKIKNVYNSEPQTKIYESYKLPNHLKDKVKNNNQTQIDENDFDNKIFYKPNVAAHTQFIDYKYNGNHSVEIKFETDALEVYEIRPVSIATITHVTIPNDCASTNSNSNECVLITHVWNSSKFVGSNFSCSITCTNKETGQLASHINPIAPVRAFIGPNKNYAFYFIIKFLINKEITTLCKAIIKDSNGKECSTEEFELQSKESVHTVETEVDETTEQVVVVEQHPSSPDIINPDAYACKCTINLLCYVINFKTCSNYYINLIKTLIGKFAIIAILIILAPALIPLLPFILNFFFLFISTILKLYQSIINTLGQFSIRNNDKHIVYKKKNHDMKTNHLSASSYSSLSDSSSIHSNNSVSSMRKNKKKFNIGNISSIVKQKKWNRKVKPKEPN
SIO_010081: PCHAS_1213300
subclass of: SO_0000673
so part of: PCHAS_1213300
location: join(457025..457252,457462..459648)
location: region:457025-459648:1
so has part: feature:457025-457252:1:exon
so has part: feature:457462-459648:1:exon

XP_739579.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457025-457252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457462-459648:1:exon

PCHAS_1213400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1213400
old locus tag: PCHAS_121340
so part of: sequence
location: <462159..>468316
location: region:462159-468316:1
so has part: feature:462159-468316:1:exon
subclass of: SO_0000010

3496667
type: Gene
SIO_000068: ncbigene

position:462159:1
position: 462159
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:468316:1
position: 468316
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462159-468316:1:exon

PCHAS_1213400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1213400
old locus tag: PCHAS_121340
product: SPRY domain-containing protein, putative
transcript id: XM_738469.2
SIO_010081: PCHAS_1213400
subclass of: SO_0000673
so part of: PCHAS_1213400
location: join(<462159..467790,468045..>468316)
location: region:462159-468316:1
so has part: feature:462159-467790:1:exon
so has part: feature:468045-468316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:462159-467790:1:exon

position:467790:1
position: 467790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:468045-468316:1:exon

position:468045:1
position: 468045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1213400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1213400
old locus tag: PCHAS_121340
note: term=annotation;date=20170727;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=spry domain-containing protein, putative;curatorName=ucb@sanger.ac.uk; ;query 296-353; ;query 276-295; ;query 354-376; ;query 1-275; ;query 377-1967; tmhmm; query 1-1968; pfam_scan;Pfam:PF00622.24; E()=5.7E-15;score=55.4;query 798-912;description=SPRY; iprscan;InterPro:IPR013320 : Concanavalin A-like lectin/glucanase domain;Superfamily:SSF49899; score=1.35E-17;query 748-912;description=Concanavalin A-like lectin/glucanase domain superfamily; iprscan;InterPro:IPR013144 : CT11-RanBPM;SMART:SM00757; score=4.9E-19;query 1810-1909;description=CRA domain; iprscan;InterPro:IPR003877 : SPla/RYanodine receptor SPRY;Pfam:PF00622; score=5.9E-15;query 798-912;description=SPRY domain; iprscan;InterPro:IPR003877 : SPla/RYanodine receptor SPRY;SMART:SM00449; score=3.3E-12;query 796-915;description=SPRY domain; iprscan;InterPro:IPR001870 : B302, (SPRY)-like;Prosite:PS50188; score=13.35;query 732-918;description=B30.2/SPRY domain
codon start: 1
product: SPRY domain-containing protein, putative
translation: MDKKQILLFNKISKMIDKRKKRNKEFDFFDFKEINTRKKYNKCVEIAHLYLKLKAIKTKGNKNNDDHIMDDHCMVKEVLGLKSLYSNKHMLIKDITKSIQSKLTKEWYNDGEMKILRYNIKENTIKNISINNLFIILNDIFCLSSQNFTNPQKRRHYSTHMIYDDFSQIIDLCSNWSYEINFSNRRFSKLNIIITHTQNDKNNENYYDGNEYGVIHITMLHRINKIIRNCKINNILFYIYFKKLSKYSSYKIKRMTLINNNNDNNKNTLHQSMDFFYYYPLYNIINETVVYYININMPSFCYFKNKESNNLFLKILIYRKLYYILLENYKIWGNREVLLACFFYAIVKFIMHIYLYIVMCFYYFLISFYKFIINIVLCFLKYKINLFYNVDNIQKKKNLIPIFEKREISNSSFLHLFKITIIPEDNYVDTKIKNSKKNNKINGEYKNISYLNRKSSLFNMCSKNENNILSSHHCSFFPLIFSTENSTYINNGEKKNKKYVLLLSKKINKIMKASQKIKKKGMSKCSYNNRINKNIASYNKIFMLIKNEKNYKTNMKYWKQYEKKKEHIETDGTVSDSYFEYEDEYDEEEDNEDDEEEDEKEEEEDEKDEDEKDEDEKDEGEKEEEEEEDEEEEEEEEEDEEEEEDEDEDEDDEDDDEDEDDEDEDEDEDDEEEDEEKEKRRNQCKKGKIYNKKKYKKNYKKKFTNAINEESEREIEKEDNYYFKKKELYLNKKNKNFKNNYIYLNNLYKENAYINIANISNFISVSKDKLTAMYSAWGKHADIACVQINKCALRDCSIYYFEVEILQCTNFSKIVIGMTSKNYTVNKNPGFEYNSFGYKSDDGKKIIDGKLDSYSSGYTKNDIIGCGINYFDNSAFFTKNGKYLGKICTINPKYDYYGTVGLSTLGDKIKFHMNNFIFDIYNLIHEENEKERKIIKSIYIQKDIYSDIIKAHLIKCGYLNTYKSFINFLDQNKNTDDNSSSGCSSHTKNSIDNILKSKYRLPQKSSDKNEVITSSAKDNDKIVKDNEQNNNKENDKVKLEDTGCNGNNGNAEVCSSTSHTDENINTPKMNTTINNNTKDDTPNDNTRLNNKKADTPHNNNKNENAQHICQDNEVQKSNTNHTTEIGKNGEGSMKSVSTTLDASTNTEVVIPNEDANNSTNDKNCDSKNLMNNALISYIDKFDKLNKDDNANNEMGANCDNDDSEEKECKSSEALTTDKSVLAKNESIENEDKHINNVKSDEKTENGEKSNNELADDITVKKNDSTVDKKTDDDQKCEDDEKKIKTESLETNEVKSFNNDLVNNCTNMSMDSILFPSRKNNLSSLINARKDSSSILLSRLRNKRSLSTKDNLNMLGANLTNTKKEAKRSETDINKKIHLLFTDKFNGTNNNEKNKKNKKEGNKSSSDKENVSKHFGNLYLSDDKLKKMQDTLETRNTIRNNILNGNIINVLNILENDYSELFTNENGHLHIAMLYTQQLIEILKPHKNFIKKIAKKNQKKSKKYYNNNLEEGVLTQSSLKSYKDISDDYFYEDTETEFDSSVSLFCDSSNNEENNFDPTKTKAYKNEVKKGYSDVRKRKNLDNYKTNTSKIVEGQNSDTDASAYGSSKGCNSDKSFNKKENNISCDVIDQNKNSPPPNGDILKNNNTTENDNNLNNTFNNNIEKDKNSIVNKDDLKDDDNLNTKKMDQIIYKNIQSNYDKEFFEKNNLQEEYERHYNKLSKEYEFFEDDNPYKNKKFYYGNISNSNKTRDTEQYMNNCNSESEINSDYDSNDSNFKKKYYEFNDIDFDQIYKYIYKKNNVSKNDKLKFKKDHLYLALLWIREKLSLFNNSQNPAIRQCIQDITSLIAYHKPYKQKLVRMFFSKNRNLLTFNSVNEGILGLCLNVPIYSPLEIIIKHLILCRNLLREKKGNIGIKYDCSYVCQPYKRYMITIKNQKKKKIYFKETTNKKKEKGILSGKFTEDNILSVFQ
SIO_010081: PCHAS_1213400
subclass of: SO_0000673
so part of: PCHAS_1213400
location: join(462159..467790,468045..468316)
location: region:462159-468316:1
so has part: feature:462159-467790:1:exon
so has part: feature:468045-468316:1:exon

XP_743562.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462159-467790:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:468045-468316:1:exon

PCHAS_1213500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1213500
old locus tag: PCHAS_121350
so part of: sequence
location: <469109..>470083
location: region:469109-470083:1
so has part: feature:469109-470083:1:exon
subclass of: SO_0000010

27794957
type: Gene
SIO_000068: ncbigene

position:469109:1
position: 469109
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:470083:1
position: 470083
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469109-470083:1:exon

PCHAS_1213500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1213500
old locus tag: PCHAS_121350
product: MO15-related protein kinase, putative
transcript id: XM_016798846.1
SIO_010081: PCHAS_1213500
subclass of: SO_0000673
so part of: PCHAS_1213500
location: <469109..>470083
location: region:469109-470083:1
so has part: feature:469109-470083:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469109-470083:1:exon

PCHAS_1213500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1213500
old locus tag: PCHAS_121350
note: term=annotation;date=20160816;qualifier=added_GO:00 05634;qualifier=added_literature=pmid:20332005;curatorName =ucb@sanger.ac.uk; pfam_scan;Pfam:PF00069.21; E()=2.7E-68;score=230.0;query 15-308;description=Pkinase; iprscan;InterPro:IPR008266 : Tyrosine protein kinase, active site;Prosite:PS00109; score=1.0;query 132-144;description=Tyrosine-protein kinase, active site; iprscan;InterPro:IPR011009 : Protein kinase-like;Superfamily:SSF56112; score=2.02E-86;query 14-315;description=Protein kinase-like domain superfamily; iprscan;InterPro:IPR000719 : Protein kinase, core;Pfam:PF00069; score=3.9E-69;query 15-308;description=Protein kinase domain; iprscan;InterPro:IPR000719 : Protein kinase, core;Prosite:PS50011; score=41.63;query 10-308;description=Protein kinase domain; iprscan;Pfam:PF12330; score=1.9E-6;query 17-158;description=null; iprscan;PIRSF:PIRSF000654; score=1.2E-20;query 2-243;description=null; iprscan;InterPro:IPR017441 : Protein kinase, ATP binding site;Prosite:PS00107; score=1.0;query 16-40;description=Protein kinase, ATP binding site
codon start: 1
product: MO15-related protein kinase, putative
translation: MEQNSNERYIFKPNFLGEGSYGKVYKAYDTVLKKEVAIKKMKLNKISNYIDECGINFLILREIKIMKEIKHKNVMNALDLYCEKDYINLVMEIMDYDLAKLINRKILLTDSQKKCILLQILNGLNTLHKYYFMHRDLSPANIFINKKGEVKIADFGLSSKYAFDMHSGKTANDKYSKRALNLTSKVVTLWYRAPELLMGSNKYNSSIDMWSFGCIFAELLLQKALFPGENEIDQLGKIFFLLGTPNENNWPEAKHLPLYTEFTKSSKKNLKNIIKTDDDDCIDLLTSLLKLNSHERITAEEALKHRYFLNDPLPCDASQLFIDM
SIO_010081: PCHAS_1213500
subclass of: SO_0000673
so part of: PCHAS_1213500
location: 469109..470083
location: region:469109-470083:1
so has part: feature:469109-470083:1:exon

XP_016654210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469109-470083:1:exon

PCHAS_1213600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1213600
old locus tag: PCHAS_121360
so part of: sequence
location: <471183..>475001
location: region:471183-475001:1
so has part: feature:471183-475001:1:exon
subclass of: SO_0000010

3494835
type: Gene
SIO_000068: ncbigene

position:471183:1
position: 471183
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:475001:1
position: 475001
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471183-475001:1:exon

PCHAS_1213600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1213600
old locus tag: PCHAS_121360
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798847.1
SIO_010081: PCHAS_1213600
subclass of: SO_0000673
so part of: PCHAS_1213600
location: <471183..>475001
location: region:471183-475001:1
so has part: feature:471183-475001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:471183-475001:1:exon

PCHAS_1213600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1213600
old locus tag: PCHAS_121360
note: query 1235-1235;GPI_cleavage_site_score=1.14
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MDDVFFEGYKNKGESCTRDNLNKLLINLNEEECDEKFGNDNFYEIFDRYNKVSFNKKICEKIIKKICYRNNLKYINYYVNNFEKIKDIKVLKERGENRICVLVLCLNYIYCNINNEIMTIYELKNQIKRNIDKKRKVYCKNLAKIIFNICNRLEIKNFMNNDFLPYMEKYIITIINKMKLLNDTASDLKKTLQVQEKKLNAFDDIFEYINNFKNNSELILDKRDNPKTNLIESDAGELTDQSIPSLEKLGEKSALDSVDSEYNDEFVNKNDNKDALKKTLKIKNGHQDVYNNTDVISEKIYANEDFFYNYIFSECVDKNDEHSCDNNSTYSNASEHLVVNNKRGRKKKQISSSEMKNKNNKNGASKKMHNITISNIGEEKKKQYPQILIEYLEKNFKPLSLYSCILYSFFIIWNKKENMDTNLYHNKSRWGGGNLHYFLCSSIIITFNIFNIKITDQFICFCLDVHQQTIITQKKEILEFFLLTFNKFLGFNINKYKDVFFCLRIISSNYLLLQMYLFYIIKNYELSNKRDFFVSLELLQIYIAKYFRNINKHFLNLSDIIIDYNFLFSSENVYKDFHEIISQNYDLIHTKKLLKNVIKKHLSENEKKIYQEHNFNELYDIDLKNINMYMKQIFSYNIFTDHRLKTSSANPRENSQCMHPKKDDNINENRIGKNNNETNANRKDKGNYSESDTILCKGNEILPSYDNSCAENSSKHNKEKEINIFVYNDSVLYNSNGNNSEDSDTYDKENDEVTTAWDTVTNNNGEKYLENEMTIKPSIIKIEDGNKLTSIENLDDVFVKYEMKSSNSKLANFIIENSNKLKKNERLIDFLNYIHVLKKINMSTINETNFEIMHYYNIKIIVRFLFFNILKSIIYNCYCAEFFIPNKIHQSITNRKNFKNLSPLFKGQINNLNDQIKIKVANKIKEFKNKKQNFEKYLICEQGFYIKFFKNSKMFKEDIQQILEDNNIILQDVKTLLHYSDNEEGTNNYGNSSLNASAVPLEGLADCVNNHNTIYDAKDHHENSVNDKKRGAHNIKNTSPSDKNNGDMPISDTCGPSKKKNKKNKTNDKNNNNNRSENKQKIKIHLSSLDMNDNSKDTKKQDSTKNESFNLFEYIYNIKMMKEYKNLEILFGQNYFTELFNIFNNVNYSFGSKKKKLINMNSCLFHTYHIIGIKKLSDIGYNFTFKNELNNIYSKVLKTKFSNILSIQDINYLFNNFFYFLFKYIKSHCCFSQTNGANLYFHQSDQDLSTICLCNTNRCCYKIKTIVLFENL
SIO_010081: PCHAS_1213600
subclass of: SO_0000673
so part of: PCHAS_1213600
location: 471183..475001
location: region:471183-475001:1
so has part: feature:471183-475001:1:exon

XP_016654211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471183-475001:1:exon

PCHAS_1213700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1213700
old locus tag: PCHAS_121370
so part of: sequence
location: complement(<475625..>482206)
location: region:475625-482206:-1
so has part: feature:475625-482206:-1:exon
subclass of: SO_0000010

3488903
type: Gene
SIO_000068: ncbigene

position:475625:-1
position: 475625
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:482206:-1
position: 482206
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475625-482206:-1:exon

PCHAS_1213700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1213700
old locus tag: PCHAS_121370
product: transcriptional coactivator ADA2, putative
transcript id: XM_730812.2
SIO_010081: PCHAS_1213700
subclass of: SO_0000673
so part of: PCHAS_1213700
location: complement(<475625..>482206)
location: region:475625-482206:-1
so has part: feature:475625-482206:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:475625-482206:-1:exon

PCHAS_1213700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1213700
old locus tag: PCHAS_121370
note: query 2168-2168;GPI_cleavage_site_score=0.75399995; pfam_scan;Pfam:PF00569.13; E()=4.6E-8;score=32.6;query 1302-1337;description=ZZ; pfam_scan;Pfam:PF00249.27; E()=6.1E-11;score=42.2;query 1365-1414;description=Myb_DNA-binding; iprscan;InterPro:IPR000433 : Zinc finger, ZZ-type;Prosite:PS01357; score=1.0;query 1305-1332;description=Zinc finger, ZZ-type; iprscan;InterPro:IPR000433 : Zinc finger, ZZ-type;SMART:SM00291; score=2.2E-7;query 1299-1343;description=Zinc finger, ZZ-type; iprscan;InterPro:IPR000433 : Zinc finger, ZZ-type;Pfam:PF00569; score=4.7E-8;query 1302-1337;description=Zinc finger, ZZ-type; iprscan;InterPro:IPR000433 : Zinc finger, ZZ-type;Prosite:PS50135; score=10.587;query 1299-1346;description=Zinc finger, ZZ-type; iprscan;Superfamily:SSF57850; score=1.32E-13;query 1301-1369;description=null; iprscan;InterPro:IPR009057 : Homeodomain-like;Superfamily:SSF46689; score=2.44E-11;que ry 1361-1416;description=Homeobox-like domain superfamily; iprscan;InterPro:IPR009057 : Homeodomain-like;Superfamily:SSF46689; score=5.73E-12;que ry 1644-1727;description=Homeobox-like domain superfamily; iprscan;InterPro:IPR001005 : SANT, DNA-binding;Pfam:PF00249; score=5.1E-11;query 1365-1414;description=SANT/Myb domain; iprscan;InterPro:IPR001005 : SANT, DNA-binding;SMART:SM00717; score=2.8E-11;query 1363-1417;description=SANT/Myb domain; iprscan;InterPro:IPR017884 : SANT, eukarya;Prosite:PS51293; score=17.855;query 1362-1419;description=SANT domain
codon start: 1
product: transcriptional coactivator ADA2, putative
translation: MNNVYKYDELYSCALKPYENNAISNSYINNAEQLIKFYEYLLALHIIQVLLIKHGEALSKEKLKDNHNNLYKFVNDQNKNNVNTIQINNHNSDNKYDEINLITNNDSNTINNSQKCVNVTTDRCIMSSGCYSSRNENKLIKLDSVNHDISFYNNQIINKEISNFSNEGRVKLSYDQDIDNNFVLNYKKNTICNYVSSKNCEKNAIAILDGSKEKTNFSDRTHNGIVVKKYSKANEKKQKVIVHNNFPLFINQIKSIVTFNNLQKNIFLYNILNNFKEVVYINKMIKCQEPYYILNKNIELIIISDEIKKFRMFKCIFEINKLSNKFIFHLIYQDKNIYRFINYFLCKKYVRLIKNGTINISSNTKSDSIKYNLVEIFHKIFGKLIHNMKKKSYTTTNLIELVKEEIIKMENSCISLSCPHKINDKIISILFRNIFKLVKRYIGVKNKFPFPPKNNIRHVKYIYKFLLFFLFNMFKRYSNIYKEMECKIFLNIEEDIDRYKFCSQNKKTIFNIKHIFQYINNFKCDKKYTKLLNTFEHNLKYIIKSKINDGKKGSPRCCSNMNDGDNKNYNYSNNNYSNNNSRDVNNNNLGNYDGNKFFGNGNDGMDAGGTGGGGDDNSNSNNHNNGNNYYDSDEEDEKRKNGNKNNLEDKLKNGNGYNNDMNNGNYNNMDDNINKNNDMFVNNFSNMDNKIEGGFNRNPSASLSDKGGMIPEGVTDMNNQNLSHINYKNAKNMMNAPGMIPHGGPNAEMNNRIGNPSLNQMMNLNNNSNPYIPTDSLMHDMKQSSQLLKQKQNLYNPGTQNMADNKNDTNKLNNATQANRNNSNNIVPPNFMQNPLHQQFQMQQQLNLQQLLHEQNMHQYNMMQGNQGKFPNQPQLQKQGTNAPLLNISQMVPMNPNDQRNVMVSQKIPRSSISSGNPAESANNSQRNSTAGVNSSLIPNQANLPNPATMKFPYKGNNPPQNINNSNITGNNMPQQAMGPHHLQQVQQQPPMQHMQQSQRNSLSTNPANKSNMQHNLMQMHPQNPQYMMQGKNPNPQQLMQQSQPNMQKVQHQLFQYAQGVQQQMIPPQKNMNPASMNPQMNRQQNHMPGMGGSGGSATHGPLNQQNAPQFMHNNNPVHAYQPHNAPFLQRTPGQPVSHQQIPFEWMHNPYLQQQYLLQQCHLTPQQLYIQQQQQKQHNLLQQKQQTMIQHQQQGIPSILINQQKQGGMQMHPNNPQQQQMQLLAIQHMNFPFKENMPVNFHQQMYKDNIIGINTNFDSMQNLNEMQRMNNEWVKGRILSVSNNNNNASIEGVPEDDIFDSNYHCDICNKDITHTIRIRCADCVDFDLCINCFSSGKEIKSEKCEHYNYHNYIPIPKYDFPLYKLNWSAEEELLLLDGISKYGFGNWEQVADLVNSVAKIPKTNKECESHYYNYYLKSSCAPLPDNKRLLIKPDGNPYDIEHVIEKDINENEDYVQTKNKKNTRTQIIGYWPLRGDFDIEYDNDAELLLADMEFKESDLPQQKELKLQVLEIYNSKLDERIYRKRTVIERGLLDTKSQLQKDKKRTKEEKELYTALKPLSRFLSPQHHEYFIQLLLEEQKLRQRLTKLQEWKTLGLQNIEQVQEYEVEKNRRAKESIKQQQENTENKVTKSFKSSKHEYKIKSEELEDNNDKKLNIETFLALDLLNEKEVEFCKDMKLPILFFLLIKRLLIMEVSNTNISMLKDINELKLKGYKVGQLYDFFLSFDLNQKDENMISDIAGADDNYDDKYSHFKKGEEKKKRGRPHIDFSSIDGMEKNEMNDHNIGTGTNNQSGNYNNANGYNNKISNAKNSTLINSIGGDNSQNLEANKSSEKNDDATLNDKNNLNNENGNDLYLSEKNNSTLNDMNEEVEGIGKRGRDKKNKKDEKKNSQLFDTSKNSDVFSGLEQQSSNTQENLSEKKKKSPKKRNSINETEKVENIKNSNDTEKGNSMNYNSDNDDDDEDDKKNNNKGKKKTNLKKKSSEIFNDTTSNANKNIQSKK…
SIO_010081: PCHAS_1213700
subclass of: SO_0000673
so part of: PCHAS_1213700
location: complement(475625..482206)
location: region:475625-482206:-1
so has part: feature:475625-482206:-1:exon

XP_735905.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475625-482206:-1:exon

PCHAS_1213800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1213800
old locus tag: PCHAS_121380
so part of: sequence
location: <487164..>488015
location: region:487164-488015:1
so has part: feature:487164-488015:1:exon
subclass of: SO_0000010

27794958
type: Gene
SIO_000068: ncbigene

position:487164:1
position: 487164
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:488015:1
position: 488015
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487164-488015:1:exon

PCHAS_1213800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1213800
old locus tag: PCHAS_121380
product: prohibitin 2, putative
transcript id: XM_016798848.1
SIO_010081: PCHAS_1213800
subclass of: SO_0000673
so part of: PCHAS_1213800
location: <487164..>488015
location: region:487164-488015:1
so has part: feature:487164-488015:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:487164-488015:1:exon

PCHAS_1213800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1213800
old locus tag: PCHAS_121380
note: term=annotation;date=20180419;qualifier=removed_pro duct=prohibitin, putative;qualifier=added_product=prohibitin 2, putative;qualifier=added_literature=pmid:29669282;qualifie r=added_gene_name=phb2;qualifier=added_GO:0005739;curatorN ame=ucb@sanger.ac.uk; pfam_scan;Pfam:PF01145.21; E()=8.1E-22;score=77.9;query 42-219;description=Band_7; iprscan;InterPro:IPR001107 : Band 7 protein;SMART:SM00244; score=3.0E-33;query 39-200;description=Band 7 domain; iprscan;InterPro:IPR001107 : Band 7 protein;Pfam:PF01145; score=1.3E-21;query 42-219;description=Band 7 domain; iprscan;InterPro:IPR036013 : Band 7/SPFH domain superfamily;Superfamily:SSF117892; score=4.45E-15;query 71-207;description=Band 7/SPFH domain superfamily; iprscan;InterPro:IPR000163 : Prohibitin;PRINTS:PR00679; score=8.4E-65;query 124-142;description=Prohibitin; iprscan;InterPro:IPR000163 : Prohibitin;PRINTS:PR00679; score=8.4E-65;query 101-120;description=Prohibitin; iprscan;InterPro:IPR000163 : Prohibitin;PRINTS:PR00679; score=8.4E-65;query 218-234;description=Prohibitin; iprscan;InterPro:IPR000163 : Prohibitin;PRINTS:PR00679; score=8.4E-65;query 170-189;description=Prohibitin; iprscan;InterPro:IPR000163 : Prohibitin;PRINTS:PR00679; score=8.4E-65;query 195-218;description=Prohibitin; iprscan;InterPro:IPR000163 : Prohibitin;PRINTS:PR00679; score=8.4E-65;query 147-163;description=Prohibitin; iprscan;InterPro:IPR000163 : Prohibitin;PRINTS:PR00679; score=8.4E-65;query 83-99;description=Prohibitin
codon start: 1
product: prohibitin 2, putative
translation: MNNPQNFDIHNLRRVGKLGVTVGTILGLTSFGSWLLNNSLYNVEAGKRAIKYNRLFGLSNKIYGEGTHFLIPYFERSIIYDVRTKPRVLMSLTGSRDLQMVNITCRVLSRPNEYKLVEIYRTLGKEYDEKVLPSIINEVLKSVVAQYNASQLITQREVVSKSVREQLVRRAKDFNILLDDASITHLSFSAEYEKAVEAKQVAQQEAERSKYIVLKAEQEKKSTIIKAQGEAEVAKLIGLAVKDNPAFMELKKIELSKEVSNIISKCQNKVMLPAESLLINFSK
SIO_010081: PCHAS_1213800
subclass of: SO_0000673
so part of: PCHAS_1213800
location: 487164..488015
location: region:487164-488015:1
so has part: feature:487164-488015:1:exon

XP_016654212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487164-488015:1:exon

PCHAS_1213900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1213900
old locus tag: PCHAS_121390
so part of: sequence
location: complement(<488372..>492123)
location: region:488372-492123:-1
so has part: feature:488372-492123:-1:exon
subclass of: SO_0000010

3496551
type: Gene
SIO_000068: ncbigene

position:488372:-1
position: 488372
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:492123:-1
position: 492123
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488372-492123:-1:exon

PCHAS_1213900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1213900
old locus tag: PCHAS_121390
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798849.1
SIO_010081: PCHAS_1213900
subclass of: SO_0000673
so part of: PCHAS_1213900
location: complement(join(<488372..488425,488556..488613,488695..488953,489047..489122,489249..489642,489805..490678,490869..491209,491363..491413,491517..491735,491879..491932,492071..>492123))
location: region:488372-492123:-1
so has part: feature:492071-492123:-1:exon
so has part: feature:491879-491932:-1:exon
so has part: feature:491517-491735:-1:exon
so has part: feature:491363-491413:-1:exon
so has part: feature:490869-491209:-1:exon
so has part: feature:489805-490678:-1:exon
so has part: feature:489249-489642:-1:exon
so has part: feature:489047-489122:-1:exon
so has part: feature:488695-488953:-1:exon
so has part: feature:488556-488613:-1:exon
so has part: feature:488372-488425:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492071-492123:-1:exon

position:492071:-1
position: 492071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:491879-491932:-1:exon

position:491879:-1
position: 491879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491932:-1
position: 491932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:491517-491735:-1:exon

position:491517:-1
position: 491517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491735:-1
position: 491735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:491363-491413:-1:exon

position:491363:-1
position: 491363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491413:-1
position: 491413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:490869-491209:-1:exon

position:490869:-1
position: 490869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491209:-1
position: 491209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:489805-490678:-1:exon

position:489805:-1
position: 489805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490678:-1
position: 490678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:489249-489642:-1:exon

position:489249:-1
position: 489249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489642:-1
position: 489642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:489047-489122:-1:exon

position:489047:-1
position: 489047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489122:-1
position: 489122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:488695-488953:-1:exon

position:488695:-1
position: 488695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488953:-1
position: 488953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:488556-488613:-1:exon

position:488556:-1
position: 488556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488613:-1
position: 488613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:488372-488425:-1:exon

position:488425:-1
position: 488425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1213900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1213900
old locus tag: PCHAS_121390
note: pfam_scan;Pfam:PF14469.2; E()=3.4E-5;score=23.4;query 5-116;description=AKAP28; iprscan;InterPro:IPR011992 : EF-hand domain pair;Superfamily:SSF47473; score=2.68E-11;query 467-613;description=EF-hand domain pair; iprscan;InterPro:IPR025663 : A-kinase anchor protein 28kDa;Pfam:PF14469; score=6.2E-5;query 5-116;description=A-kinase anchor protein 28kDa
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MDERIELLISIINKWTNKYAHKIYVTGQDEEKREHYYKVIFFHQNNNEPIPKYKIDTYFIITELGTTNLDPLNDYTNSDEKYFVSFKFENETLTRTLDMNLNYEAWIDKLIKDKERLRGFINLSSKFMKTRFAKAVPKSEISLILEKIKEDRELLRKNNQENQKPDELINENILNKKCFYDQTYELEKMNSQTHLNNIDKNKLDRNKKENYINDKLNEALSFLKSYLYRYLSNADIKKRGKLKHNYYVEILKMVNYKFCISYFHFENKKSKEKTGEQELNETTSGSENYFFCDTDEDDCLSVNENSEEESKDKQTTGEKEDRKYLSNLFNINNKEIDLIKNCDIYINNNFNGSDIFFGTPDEIPRNSNIFIFDNSNEKGDRNNIGSYYKYIFTNNYYDFLLYISYSDEEDNGFIYYNNYVNNLPKYLYELNKNRELFVDMNFEDLVLYKQLIYACYEKELNFLYDTLLYQFKKYDLCDSGYIHRTKFKKILEENNHIISKQEYKLLIHIFHYNDDNYVYYKNIKEVILRLRFEGIRNSIFERNADLLQKYLCEQLVKHNLKNKKKIHIFDCKHVLDNCDKLYLNKNTIHTILCSLDFDKNLELDINLFLKMSITIITSMIKLENMQMIYNIINDDKQKKEDCQTEGTTGVFSKKKTIRIAEKANIPAQELVEITLTKLFKVLDEKNEDHLKIIDFIETLLESNKKKKIIDIKEICKLSKKELQGFVAEIDTEPKKKSFMNDQNKNNRSFEVYKNRKIHYASHIHKWCSKTYQIRSCEYYNYFFNHPHDLVKLNEDINKRILFCEEEKELF
SIO_010081: PCHAS_1213900
subclass of: SO_0000673
so part of: PCHAS_1213900
location: complement(join(488372..488425,488556..488613,488695..488953,489047..489122,489249..489642,489805..490678,490869..491209,491363..491413,491517..491735,491879..491932,492071..492123))
location: region:488372-492123:-1
so has part: feature:492071-492123:-1:exon
so has part: feature:491879-491932:-1:exon
so has part: feature:491517-491735:-1:exon
so has part: feature:491363-491413:-1:exon
so has part: feature:490869-491209:-1:exon
so has part: feature:489805-490678:-1:exon
so has part: feature:489249-489642:-1:exon
so has part: feature:489047-489122:-1:exon
so has part: feature:488695-488953:-1:exon
so has part: feature:488556-488613:-1:exon
so has part: feature:488372-488425:-1:exon

XP_016654213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492071-492123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:491879-491932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491517-491735:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:491363-491413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:490869-491209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:489805-490678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:489249-489642:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:489047-489122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:488695-488953:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:488556-488613:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:488372-488425:-1:exon

PCHAS_1214000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1214000
old locus tag: PCHAS_121400
so part of: sequence
location: complement(<492688..>498261)
location: region:492688-498261:-1
so has part: feature:492688-498261:-1:exon
subclass of: SO_0000010

3494504
type: Gene
SIO_000068: ncbigene

position:492688:-1
position: 492688
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:498261:-1
position: 498261
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492688-498261:-1:exon

PCHAS_1214000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1214000
old locus tag: PCHAS_121400
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798850.1
SIO_010081: PCHAS_1214000
subclass of: SO_0000673
so part of: PCHAS_1214000
location: complement(<492688..>498261)
location: region:492688-498261:-1
so has part: feature:492688-498261:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492688-498261:-1:exon

PCHAS_1214000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1214000
old locus tag: PCHAS_121400
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MSVNNSTEVVINNDKENDASNYKPTNDINLFSDHLNRDMKGVFNDSTKETNLHEQGRNNCNIDNFFNDFNEIYLNTFSNNFSKPIEVEKKVCHENKHLDNAQEKVINNDDKKEEKLLLNIADNMNCSEINMKDLASSEKKNISEFTNILEDINKKDEENEKTEKPKLVSKYLEELNYNNKKNHAPIFSEASSLIDISSISEETKQSVYSKLNYDFSSITNLGLNKYMLNEMENDQNKKIEHNNVCDKEEIDHKSSNDETRIDNTNEIIDGSSIQKKSECSDLTNSSENESDGIDKLFNRHKIEVSNLSKYFDFHKNEIKTNIDTLKSGEAVQNDDCNDLYTNLENDEIYEYGSDSSNNSTESLDEKKIYIEKREDNENKKVNTNTILTLDNLEKINKNYATLKKSESDSMFAEEDSLNLETNDTNYITNDVLNDILNIKDDQITFEKFKNYFTSLNYQVSTDNLILLFNAIVEHKKCNMKNEEVENNEINKEETYIKIDDIKSYVIERNSKNNNYFNEILKMIVHFNNILLLMANSSAIKKEDKILFELLVFKFSSSFNEIIETPNDVDNLIKHLNEIIKLILSDESKNKNLKNIILTYLNTNKISLKNNEILSQLNKSSENVFEKSEQIKSADNAKVAEHDLEKGMTLLSSNGSSNGNRKEEECQDKAINEDLSIKTEKEIINNLKTPLNDAENNTRNLTKDIIISEINNTNISSKNAKKNDILLDKMDRSSLKSNECSEHTERTDELFEEGDSINENADEMTQERNIINIDQIKDSAKITNLNENPCNKNKKMKKNSKKNIKCKNVVSNSKIDEINSNSTNGNKKKKIKLEKKNKAEDNEEKVDTVEKQNEKIKNINEICKKIKERTTACLDAKKNYMRNYTNDINMKNVQNYMKRFSSMNNTNNIPAYIIMNKNNRYINSNNAIYKKNNFLFPSMGNINDYNTQNVKLANSAYSNENKTVEKLELFNPHIFKDSCQNNFIKKISTNENTDNRINSNQYLWNEKLRTHSNIKQNPNNYIMHTKNCKNNNTAHYKENPCLHFPSHLNSTIDNSYITKLSEDYMFTSNLSPYKNAILTKESNININPINKVRTTISINNAINGINIGNDRMCEQSKMILKKDGSVASTSKSDVNKNIIGNVPENNNININNEQYKIKSISNLNQFKNKLVDEKNKRYSISYGRIPNNNVYIGFRRNINNSSSKNNGNANGRRNKSQSRYLTSKSDVHATINSSTNLTSEKKDNEFTKKNLSNFESGLFKLKSFANILTDTNKSKEVGEKNEKESKNVYHRFTEIITNGIKRFTLGSTKSISSNITDEKENKDAINDFTNNSEESNTEKDNNNTNIMIEQAGKKEKTENAENNKIEESQCINKSNDDNDKISNTSCNAKENNLNDTNTKQINTLSNNVDEIKKQTNNIINYRNSNVHPMNNNLVNAKIVSKLNNDQVGDNVKVPNGSYKNYSSNNIINNNNNTLHTYKMHVDNPDMKYKKGYHSNVFNRGSQGLLNIKKTCSNYVNHNRITAPRYESASNTGMRSGSGVDRFIHFHKRNSTLNGAMPFPNFHEHNKNIINNIKTKGSPNEFTKPFMKRESKIDIMNNSRIINMSNNINEDIGKYIYDKDHLFLKPFTGFENIKSETNLFMQLNNDKFMAKANQINCGTSNNDINKNLKENMLEKQTNNAISSSTLKMHNNNENRNCVLKTQGVCQNDMTKTELQNEFQNNYLKNYEQSAQTNLKEYNNTKTNSNHSTKETKFIYKDDTKYNMPTTFLKEFQKNTSNNKKYIETIDENNLTIEQIMKIPGVKLGKNYIQDINVCSDWSKFNDYDQKVIKQSIQNSFDNNNYNHFMDFTQFTNTFFSTEK
SIO_010081: PCHAS_1214000
subclass of: SO_0000673
so part of: PCHAS_1214000
location: complement(492688..498261)
location: region:492688-498261:-1
so has part: feature:492688-498261:-1:exon

XP_016654214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492688-498261:-1:exon

PCHAS_1214100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1214100
old locus tag: PCHAS_121410
so part of: sequence
location: <501149..>502123
location: region:501149-502123:1
so has part: feature:501149-502123:1:exon
subclass of: SO_0000010

27794959
type: Gene
SIO_000068: ncbigene

position:501149:1
position: 501149
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:502123:1
position: 502123
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501149-502123:1:exon

PCHAS_1214100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1214100
old locus tag: PCHAS_121410
product: FAD synthetase, putative
transcript id: XM_016798851.1
SIO_010081: PCHAS_1214100
subclass of: SO_0000673
so part of: PCHAS_1214100
location: <501149..>502123
location: region:501149-502123:1
so has part: feature:501149-502123:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:501149-502123:1:exon

PCHAS_1214100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1214100
old locus tag: PCHAS_121410
note: term=annotation;date=20181130;qualifier=added_GO:00 03919;qualifier=added_GO:0006747;curatorName=ucb@sanger.ac .uk; ;query 270-324; ;query 247-269; ;query 1-246; ;query 285-285;GPI_cleavage_site_score=0.348; tmhmm; query 1-325; pfam_scan;Pfam:PF01507.15; E()=5.7E-21;score=75.2;query 110-290;description=PAPS_reduct; iprscan;InterPro:IPR002500 : Phosphoadenosine phosphosulphate reductase;Pfam:PF01507; score=5.9E-21;query 110-290;description=Phosphoadenosine phosphosulphate reductase; iprscan;Superfamily:SSF52402; score=1.53E-26;query 84-280;description=null
codon start: 1
product: FAD synthetase, putative
translation: MEEWKDYSKSLELYERIEKLHKEHVDEINKLKDSNHNEIKSCDTYINNENQLGNYKKNRDIIKPSMYNYDVMNYYKDEFILKKKILELSEDIITAIDHIYDMFRLCKENVFLSFNGGKDAVVILHLFRCAYAKYLYDIKGKIIKPKLIYFKDDENEFPEVYQFLNECVYIYDFDINVINGKWEASITNFIEIIQTQYKDSCVEKLNIKTTPSCLLPPPIAFINGTRYNDTNSEKLNILNVSSKGLPPYLYLNPIFYWTYGAVWTFILYFKIDYCILYDHGYSSIGSMNDTIKNEFLKCNDCYLPAYFLKNWEYERYNRLFHKKK
SIO_010081: PCHAS_1214100
subclass of: SO_0000673
so part of: PCHAS_1214100
location: 501149..502123
location: region:501149-502123:1
so has part: feature:501149-502123:1:exon

XP_016654215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501149-502123:1:exon

PCHAS_1214200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1214200
old locus tag: PCHAS_121420
so part of: sequence
location: complement(<502927..>504003)
location: region:502927-504003:-1
so has part: feature:502927-504003:-1:exon
subclass of: SO_0000010

27794960
type: Gene
SIO_000068: ncbigene

position:502927:-1
position: 502927
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:504003:-1
position: 504003
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502927-504003:-1:exon

PCHAS_1214200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1214200
old locus tag: PCHAS_121420
product: CWC16 domain-containing protein, putative
transcript id: XM_016798852.1
SIO_010081: PCHAS_1214200
subclass of: SO_0000673
so part of: PCHAS_1214200
location: complement(<502927..>504003)
location: region:502927-504003:-1
so has part: feature:502927-504003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:502927-504003:-1:exon

PCHAS_1214200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1214200
old locus tag: PCHAS_121420
note: term=annotation;date=20170301;qualifier=removed_pro duct=conserved protein, unknown function;qualifier=added_product=cwc16 domain-containing protein, putative;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF04502.9; E()=9.0E-65;score=219.2;query 1-355;description=DUF572; iprscan;InterPro:IPR007590 : Protein of unknown function DUF572;Pfam:PF04502; score=1.0E-64;query 1-355;description=CWC16 protein
codon start: 1
product: CWC16 domain-containing protein, putative
translation: MAERKVLNKYIPPDFDPDKLMEKKRQMKKIEKKNNKNNKYNKKKKKFLNIRMMYPFTLKCSKCKAFTYVGTKFNSRVEKLKDETYLNIPIWQFYGKCSECRNEFVFKTDPKNGDYILIEGGIRTYDAHKEQEVADEYYRTNENGKEEDKVKNIEKQSYNALQELKTNEQLEELQNMNKRHIDKFSSINKALNKLYEKNEMENNKNNIFMNNLDSEDEQKFFDLLNKNRKIANPTQNIMNIQSSNPRVIIKEDEFEEDVVDIDEMSDMNETDEKSVNFTDKYNLINKKEENGINNNNIEKEKISFKRNNITNNTTGININNKSIFSKKPLETHYKFIIKKKENISTLLNEYNSDSSEDG
SIO_010081: PCHAS_1214200
subclass of: SO_0000673
so part of: PCHAS_1214200
location: complement(502927..504003)
location: region:502927-504003:-1
so has part: feature:502927-504003:-1:exon

XP_016654216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502927-504003:-1:exon

PCHAS_1214300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1214300
old locus tag: PCHAS_121430
so part of: sequence
location: complement(<505071..>507578)
location: region:505071-507578:-1
so has part: feature:505071-507578:-1:exon
subclass of: SO_0000010

3498808
type: Gene
SIO_000068: ncbigene

position:505071:-1
position: 505071
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:507578:-1
position: 507578
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505071-507578:-1:exon

PCHAS_1214300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1214300
old locus tag: PCHAS_121430
product: cysteine--tRNA ligase, putative
transcript id: XM_016798853.1
SIO_010081: PCHAS_1214300
subclass of: SO_0000673
so part of: PCHAS_1214300
location: complement(join(<505071..506702,506893..507047,507359..>507578))
location: region:505071-507578:-1
so has part: feature:507359-507578:-1:exon
so has part: feature:506893-507047:-1:exon
so has part: feature:505071-506702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507359-507578:-1:exon

position:507359:-1
position: 507359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:506893-507047:-1:exon

position:506893:-1
position: 506893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507047:-1
position: 507047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:505071-506702:-1:exon

position:506702:-1
position: 506702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1214300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1214300
old locus tag: PCHAS_121430
note: term=annotation;date=20120718;qualifier=removed_pro duct=cysteinyl-tRNA synthetase, putative;qualifier=added_product=cysteine--trna ligase, putative;qualifier=added_ec_number=6.1.1.16;curatorName=uc b@sanger.ac.uk; pfam_scan;Pfam:PF01406.15; E()=2.2E-125;score=417.8;query 123-424;description=tRNA-synt_1e; iprscan;InterPro:IPR032678 : tRNA synthetases class I, catalytic domain;Pfam:PF01406; score=2.3E-125;query 123-424;description=tRNA synthetases class I, catalytic domain; iprscan;InterPro:IPR015803 : Cysteinyl-tRNA synthetase, class Ia, N-terminal;TIGR_TIGRFAMS:TIGR00435; score=1.1E-137;query 109-636;description=Cysteine-tRNA ligase; iprscan;InterPro:IPR009080 : Aminoacyl-tRNA synthetase, class 1a, anticodon-binding;Superfamily:SSF47323; score=1.44E-12;query 462-636;description=Aminoacyl-tRNA synthetase, class Ia, anticodon-binding; iprscan;Superfamily:SSF52374; score=2.44E-80;query 112-426;description=null; iprscan;InterPro:IPR024909 : Cysteinyl-tRNA synthetase/mycothiol ligase;PRINTS:PR00983; score=3.2E-28;query 309-327;description=Cysteinyl-tRNA synthetase/mycothiol ligase; iprscan;InterPro:IPR024909 : Cysteinyl-tRNA synthetase/mycothiol ligase;PRINTS:PR00983; score=3.2E-28;query 340-361;description=Cysteinyl-tRNA synthetase/mycothiol ligase; iprscan;InterPro:IPR024909 : Cysteinyl-tRNA synthetase/mycothiol ligase;PRINTS:PR00983; score=3.2E-28;query 132-143;description=Cysteinyl-tRNA synthetase/mycothiol ligase; iprscan;InterPro:IPR024909 : Cysteinyl-tRNA synthetase/mycothiol ligase;PRINTS:PR00983; score=3.2E-28;query 169-178;description=Cysteinyl-tRNA synthetase/mycothiol ligase
codon start: 1
product: cysteine--tRNA ligase, putative
translation: MKLFKFLCLTLFSILYRKTLFCSSININSYYNRKNKTTNRISLINQFNIKGKFPQKGMLFIPKYMHGKNNFVKNKYVLVKKLFHSNMEANSNLPKWTMPSKENKTITNLMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVSFDIIRRILTNYFKYDVFMVINITDIDDKIIKRSEEEKVNFTELARKWEYEFWEDMKNLNVLLPTSITRVSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFKKNPNHFYARMEPMSVKDETKILEGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGKGRPGWHIECSTMASNILGKVLDIHSGGVDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITIKNMLKKYTSNQIRILFLLNKWDSFMNYSPNGEGMTQCIEIDKFFTNFFALINMKIKNFDLNNCDLYWNDTDNKLNNTFRQTKTNIHNFFLDNFNTPEALVAIQKLITEINIYLQNGKVQIGLLLELKHYINFIMNTFGLFYDQAQKAKPNNFDNLLHVLGSYRSNIRTILQKNAKLIRKASKEIKIDSSDPATVENNNKINDFIKEIKTNNEDLLKECDLLRDQHLLNMGILIDDRPNNEFVIKVLDENQLQQEKEKRECDLNKKKNTDQKK
SIO_010081: PCHAS_1214300
subclass of: SO_0000673
so part of: PCHAS_1214300
location: complement(join(505071..506702,506893..507047,507359..507578))
location: region:505071-507578:-1
so has part: feature:507359-507578:-1:exon
so has part: feature:506893-507047:-1:exon
so has part: feature:505071-506702:-1:exon

XP_016654217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507359-507578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506893-507047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505071-506702:-1:exon

PCHAS_1214400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1214400
old locus tag: PCHAS_121440
so part of: sequence
location: <508268..>509683
location: region:508268-509683:1
so has part: feature:508268-509683:1:exon
subclass of: SO_0000010

3498809
type: Gene
SIO_000068: ncbigene

position:508268:1
position: 508268
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:509683:1
position: 509683
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508268-509683:1:exon

PCHAS_1214400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1214400
old locus tag: PCHAS_121440
product: methionine aminopeptidase 1b, putative
transcript id: XM_740592.2
SIO_010081: PCHAS_1214400
subclass of: SO_0000673
so part of: PCHAS_1214400
location: <508268..>509683
location: region:508268-509683:1
so has part: feature:508268-509683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:508268-509683:1:exon

PCHAS_1214400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1214400
old locus tag: PCHAS_121440
note: pfam_scan;Pfam:PF00557.20; E()=5.0E-45;score=153.6;query 215-444;description=Peptidase_M24; pfam_scan;Pfam:PF15801.1; E()=2.4E-14;score=53.2;query 66-108;description=zf-C6H2; iprscan;InterPro:IPR002467 : Peptidase M24A, methionine aminopeptidase, subfamily 1;TIGR_TIGRFAMS:TIGR00500; score=1.6E-90;query 206-453;description=Peptidase M24A, methionine aminopeptidase, subfamily 1; iprscan;InterPro:IPR002467 : Peptidase M24A, methionine aminopeptidase, subfamily 1;Prosite:PS00680; score=1.0;query 370-388;description=Peptidase M24A, methionine aminopeptidase, subfamily 1; iprscan;InterPro:IPR000994 : Peptidase M24, catalytic core;Pfam:PF00557; score=3.0E-45;query 215-443;description=Peptidase M24; iprscan;InterPro:IPR031615 : MYND-like zinc finger, mRNA-binding;Pfam:PF15801; score=2.6E-14;query 66-108;description=MYND-like zinc finger, mRNA-binding; iprscan;InterPro:IPR036005 : Creatinase/aminopeptidase-like;Superfamily:SSF55920; scor e=4.45E-86;query 160-452;description=Creatinase/aminopeptidase-like; iprscan;InterPro:IPR001714 : Peptidase M24, methionine aminopeptidase;PRINTS:PR00599; score=1.1E-19;query 395-407;description=Peptidase M24, methionine aminopeptidase; iprscan;InterPro:IPR001714 : Peptidase M24, methionine aminopeptidase;PRINTS:PR00599; score=1.1E-19;query 364-376;description=Peptidase M24, methionine aminopeptidase; iprscan;InterPro:IPR001714 : Peptidase M24, methionine aminopeptidase;PRINTS:PR00599; score=1.1E-19;query 293-309;description=Peptidase M24, methionine aminopeptidase; iprscan;InterPro:IPR001714 : Peptidase M24, methionine aminopeptidase;PRINTS:PR00599; score=1.1E-19;query 271-284;description=Peptidase M24, methionine aminopeptidase
codon start: 1
product: methionine aminopeptidase 1b, putative
translation: MSDNTKQCDSNSNKDCNNVSKSSDAKKKEELESKKCNNTHENSTSFKREDESAGIEKARENNLVCKGCGENLTKKLSCPVCLKNKINSYFCSQECFKRSWKEHSKMHPSEKENNEKEADKESKKVEKNNYTEVTKELLPQNYDPTNRKYWIYDSHLRNFLSFNFSGNIRPWPISKMNYVPDHIDKPDYAITSIPTSELKYKKKSDIYVNNSDEIERIKEACILGRKTLDYAHSLVSPGVTTDEIDKKVHDFIIKNNAYPSPLNYYEFPKSCCTSVNEIVCHGIPDYRPLKNGDIINIDISVYYKGVHADLNETYFVGENISNEAKQLVETCYFSLMEAIKKCKPGMLYKNLGNIIDAYVSKKHFSVVRTYSGHGVGKLFHSNPTIPHFRKNKAVGIMKPGHVFTIEPMINEGHYADVLWPDKWTSATADGKLSAQFEHTLLVTQTGVEILTKRLPDSPSLGFDTKDDLYII
SIO_010081: PCHAS_1214400
subclass of: SO_0000673
so part of: PCHAS_1214400
location: 508268..509683
location: region:508268-509683:1
so has part: feature:508268-509683:1:exon

XP_745685.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508268-509683:1:exon

PCHAS_1214500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1214500
old locus tag: PCHAS_121450
so part of: sequence
location: <510337..>511725
location: region:510337-511725:1
so has part: feature:510337-511725:1:exon
subclass of: SO_0000010

3498810
type: Gene
SIO_000068: ncbigene

position:510337:1
position: 510337
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:511725:1
position: 511725
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510337-511725:1:exon

PCHAS_1214500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1214500
old locus tag: PCHAS_121450
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798854.1
SIO_010081: PCHAS_1214500
subclass of: SO_0000673
so part of: PCHAS_1214500
location: <510337..>511725
location: region:510337-511725:1
so has part: feature:510337-511725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510337-511725:1:exon

PCHAS_1214500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1214500
old locus tag: PCHAS_121450
note: pfam_scan;Pfam:PF08585.8; E()=5.9E-7;score=29.2;query 59-238;description=RMI1_N; iprscan;InterPro:IPR013894 : Region of unknown function DUF1767;Pfam:PF08585; score=9.5E-8;query 131-236;description=RecQ mediated genome instability protein, N-terminal
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MKRLIEKNVIKINYNTFVNQYKKAFKCEKDIIDEELYEHFIINPFTYSRPFGCLLPNYNNTETYYLNGINIFEVVDYVSINERLYKVENSGDNEDDSDQNDENLNLPDNSENEDMIDYSNSEEEYGNGSKKGKKKKKSNKNNENVKNKGYQKGTNRNINNNNNTTQAKKNNNKYRRIFRFLLFDGKYFIYAYEYEYNEIFNYLETNKYKYPKIILYNNPVIRRKVILLKKNQVIILFKGNTTIEQNSSSIKDEEECYDIVDINQKSYFNYNNKQEELIPISTKHESNSYNWSGNYNMPNQNKHYNDDPNYLNKENNVRHFYYEDDNFKNTYTNLGTTKDEKNYNYLYKDNNSKGHTHFPLQENNNNSDKYEHFKSYTPLKQGSNFNDNVYNKNFTQTNSPNNNPNRIWINNQSNINKDSFHTNNSNNNNQLIDLTEGFFSSKFFQKSPDISNTCDDVIILDD
SIO_010081: PCHAS_1214500
subclass of: SO_0000673
so part of: PCHAS_1214500
location: 510337..511725
location: region:510337-511725:1
so has part: feature:510337-511725:1:exon

XP_016654218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510337-511725:1:exon

PCHAS_1214600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1214600
old locus tag: PCHAS_121460
so part of: sequence
location: complement(<512130..>513722)
location: region:512130-513722:-1
so has part: feature:512130-513722:-1:exon
subclass of: SO_0000010

3495580
type: Gene
SIO_000068: ncbigene

position:512130:-1
position: 512130
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:513722:-1
position: 513722
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512130-513722:-1:exon

PCHAS_1214600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1214600
old locus tag: PCHAS_121460
product: nucleotidyltransferase, putative
transcript id: XM_737396.2
SIO_010081: PCHAS_1214600
subclass of: SO_0000673
so part of: PCHAS_1214600
location: complement(<512130..>513722)
location: region:512130-513722:-1
so has part: feature:512130-513722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512130-513722:-1:exon

PCHAS_1214600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1214600
old locus tag: PCHAS_121460
note: term=annotation;date=20181201;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=nucleotidyltransferase, putative;curatorName=ucb@sanger.ac.uk; ;query 514-514;GPI_cleavage_site_score=0.152; iprscan;Superfamily:SSF81301; score=3.38E-30;query 182-323;description=null; iprscan;Superfamily:SSF81631; score=4.71E-31;query 328-523;description=null
codon start: 1
product: nucleotidyltransferase, putative
translation: MNVKFLSMISKIIKKNKKIYNLSYCSNLSSFPIFQFPVVENLKIAHQFSTIKNQYISHDEINKKIQLTNFKVAKDLSDNTINSDESDDEIYMLERDNANKEYYRKVEDENYDYTKISQEKERDSTTNSFLHKNSSDKNRASDSGANIPYTTSNSEYSEIKHVLNQCIAQHEQLYYSKECNKANTLNEELSKLEVALRPSQNDINNIKMFLKFLQNEIDKQYKNCHVTPFGSVINGFWMKNSDIDICIQIPILLNRKDQINFLKKICLILNNYHNGIIEQRFSAKVPIIHFYCDDHKNSFQLSCDISVNNILAVINSKLIQKYVSIDKRLQLMGIALKYWSKNRNINDRSKGFLSSFSLILMIIHFLQYVMEPKILVSLQDISIRRNEKSFYVMGVDCKYCQDDAIIREELKKMNIQNGVNSDNKNYDHASHIDISTLMLEFFKFYGYKYKSGIIAIRDINNYYDNFTSLKSYESYYLFVDNPFEIGKNVANILPQNYKTIIYEMKRAYKILKNNGTWEDVCKSTDNLIYS
SIO_010081: PCHAS_1214600
subclass of: SO_0000673
so part of: PCHAS_1214600
location: complement(512130..513722)
location: region:512130-513722:-1
so has part: feature:512130-513722:-1:exon

XP_742489.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512130-513722:-1:exon

PCHAS_1214700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1214700
old locus tag: PCHAS_121470
so part of: sequence
location: complement(<514796..>516777)
location: region:514796-516777:-1
so has part: feature:514796-516777:-1:exon
subclass of: SO_0000010

3496421
type: Gene
SIO_000068: ncbigene

position:514796:-1
position: 514796
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:516777:-1
position: 516777
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514796-516777:-1:exon

PCHAS_1214700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1214700
old locus tag: PCHAS_121470
product: heat shock protein 60, putative
transcript id: XM_016798855.1
SIO_010081: PCHAS_1214700
subclass of: SO_0000673
so part of: PCHAS_1214700
location: complement(join(<514796..516396,516639..>516777))
location: region:514796-516777:-1
so has part: feature:516639-516777:-1:exon
so has part: feature:514796-516396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:516639-516777:-1:exon

position:516639:-1
position: 516639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:514796-516396:-1:exon

position:516396:-1
position: 516396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1214700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1214700
old locus tag: PCHAS_121470
note: term=annotation;date=20150907;qualifier=added_GO:00 05739;qualifier=added_literature=pmid:9274871;qualifier=ad ded_literature=pmid:26317863;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF00118.20; E()=4.0E-90;score=302.7;query 51-553;description=Cpn60_TCP1; iprscan;InterPro:IPR027410 : TCP-1-like chaperonin intermediate domain superfamily;Superfamily:SSF54849; score=7.55E-22;query 166-232;description=TCP-1-like chaperonin intermediate domain superfamily; iprscan;InterPro:IPR027409 : GroEL-like apical domain;Superfamily:SSF52029; score=5.44E-73;query 213-405;description=GroEL-like apical domain superfamily; iprscan;InterPro:IPR001844 : Chaperonin Cpn60;PRINTS:PR00298; score=4.5E-67;query 379-404;description=Chaperonin Cpn60; iprscan;InterPro:IPR001844 : Chaperonin Cpn60;PRINTS:PR00298; score=4.5E-67;query 111-138;description=Chaperonin Cpn60; iprscan;InterPro:IPR001844 : Chaperonin Cpn60;PRINTS:PR00298; score=4.5E-67;query 55-81;description=Chaperonin Cpn60; iprscan;InterPro:IPR001844 : Chaperonin Cpn60;PRINTS:PR00298; score=4.5E-67;query 296-319;description=Chaperonin Cpn60; iprscan;InterPro:IPR001844 : Chaperonin Cpn60;PRINTS:PR00298; score=4.5E-67;query 427-448;description=Chaperonin Cpn60; iprscan;InterPro:IPR001844 : Chaperonin Cpn60;TIGR_TIGRFAMS:TIGR02348; score=4.2E-225;query 31-555;description=Chaperonin Cpn60; iprscan;InterPro:IPR002423 : Chaperonin Cpn60/TCP-1;Pfam:PF00118; score=4.1E-90;query 51-553;description=Chaperonin Cpn60/TCP-1 family; iprscan;InterPro:IPR027413 : GroEL-like equatorial domain superfamily;Superfamily:SSF48592; score=4.81E-76;query 35-551;description=GroEL-like equatorial domain superfamily; iprscan;InterPro:IPR018370 : Chaperonin Cpn60, conserved site;Prosite:PS00296; score=1.0;query 434-445;description=Chaperonin Cpn60, conserved site
codon start: 1
product: heat shock protein 60, putative
translation: MLSRLCGKTIHNGSTDKCVSLLNKIQKRNVAKDIRFGSDARTAMLIGCNKLADAVSVTLGPKGRNVIIEQSFGSPKITKDGVTVAKSIEFNKKLANLGAQMVKQVAANTNDKAGDGTTTATILARSIFQQGCKAVDSGMNPMDLLRGINKGVEKVLEYLNSIKKDVTTTEEIFNVASISANGDKNIGQLIADTMKKVGKEGTITVTEGKTLQHELEIVEGIKFDRGYISPYFINNSKDQKVELDKPYILIHEKKISSVKSLLPVLEHVLQNQSSLLVIAEDVDSDALATLIVNKLRLGLKICAVKAPGFGEHRKALVHDIAVMTGAKVITEEAGLKLDDPDVISYLGKAKSINVSKDNTLIMEGEGKKEEITERCESIRNAIKNNTSDYEKEKLQERLAKITGGVALIKVGGISEVEVNEIKDRIQDALCATKAAVEEGIVPGGGSALLFASKELDSVQTDNYDQRVGVNIIKDACKAPIKQIAENAGHEGSVVAGNILKEKNSNMGFNAQEGKYVNMIESGIIDPTKVVKTAISDAASIASLLTTTEVAIVDSKDGKNEEMPSHMNSVNPMGDMGGMY
SIO_010081: PCHAS_1214700
subclass of: SO_0000673
so part of: PCHAS_1214700
location: complement(join(514796..516396,516639..516777))
location: region:514796-516777:-1
so has part: feature:516639-516777:-1:exon
so has part: feature:514796-516396:-1:exon

XP_016654219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516639-516777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514796-516396:-1:exon

PCHAS_1214800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1214800
old locus tag: PCHAS_121480
so part of: sequence
location: complement(<517645..>519576)
location: region:517645-519576:-1
so has part: feature:517645-519576:-1:exon
subclass of: SO_0000010

3496422
type: Gene
SIO_000068: ncbigene

position:517645:-1
position: 517645
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:519576:-1
position: 519576
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517645-519576:-1:exon

PCHAS_1214800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1214800
old locus tag: PCHAS_121480
product: tubulin binding cofactor c, putative
transcript id: XM_016798856.1
SIO_010081: PCHAS_1214800
subclass of: SO_0000673
so part of: PCHAS_1214800
location: complement(join(<517645..517797,517905..518037,518137..518204,518344..518416,518568..518641,518732..518786,518877..519097,519192..519352,519519..>519576))
location: region:517645-519576:-1
so has part: feature:519519-519576:-1:exon
so has part: feature:519192-519352:-1:exon
so has part: feature:518877-519097:-1:exon
so has part: feature:518732-518786:-1:exon
so has part: feature:518568-518641:-1:exon
so has part: feature:518344-518416:-1:exon
so has part: feature:518137-518204:-1:exon
so has part: feature:517905-518037:-1:exon
so has part: feature:517645-517797:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:519519-519576:-1:exon

position:519519:-1
position: 519519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:519192-519352:-1:exon

position:519192:-1
position: 519192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519352:-1
position: 519352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:518877-519097:-1:exon

position:518877:-1
position: 518877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519097:-1
position: 519097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:518732-518786:-1:exon

position:518732:-1
position: 518732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518786:-1
position: 518786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:518568-518641:-1:exon

position:518568:-1
position: 518568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518641:-1
position: 518641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:518344-518416:-1:exon

position:518344:-1
position: 518344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518416:-1
position: 518416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:518137-518204:-1:exon

position:518137:-1
position: 518137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518204:-1
position: 518204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:517905-518037:-1:exon

position:517905:-1
position: 517905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518037:-1
position: 518037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:517645-517797:-1:exon

position:517797:-1
position: 517797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1214800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1214800
old locus tag: PCHAS_121480
note: term=annotation;date=20110414;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=tubulin binding cofactor c, putative;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF07986.8; E()=1.3E-32;score=111.8;query 159-275;description=TBCC; iprscan;InterPro:IPR017901 : C-CAP/cofactor C-like domain;Prosite:PS51329; score=29.143;query 126-277;description=C-CAP/cofactor C-like domain; iprscan;InterPro:IPR012945 : Tubulin binding cofactor C;Pfam:PF07986; score=6.2E-33;query 159-275;description=Tubulin binding cofactor C-like domain; iprscan;InterPro:IPR006599 : Adenylate cyclase-associated CAP/tubulin binding cofactor C;SMART:SM00673; score=0.06;query 203-237;description=CARP motif; iprscan;InterPro:IPR006599 : Adenylate cyclase-associated CAP/tubulin binding cofactor C;SMART:SM00673; score=5300.0;query 165-202;description=CARP motif
codon start: 1
product: tubulin binding cofactor c, putative
translation: MNNKLTKDDYDDLVHKQLKDIENKVRDLKNDKLNINKLHELNELSSECIKIKEKISNVYFQLLKHSSVIVYEKRAKEIIKELESLKQEIIKNENNIECPNVSQNFDDNFFIPQNCYIDEDPEHSEPVDMSLDLNKHSLSFQNQKNIKIIRGIGESTYSSLLLNNMSNCEIIFLDILSSVFIQNITNCTIWVAAVESSLLIYNCIDCNILTNSKQIRIHNAVNTNFYINSMSSPIIESSEKLVFSPYNLNFDELPKLLEKINISRNSNKWKEVLDFSWQNTQDPSPNFSISNETQAYQVQFKKKETIGCSKENDINNTYVIENFPLFLKKLD
SIO_010081: PCHAS_1214800
subclass of: SO_0000673
so part of: PCHAS_1214800
location: complement(join(517645..517797,517905..518037,518137..518204,518344..518416,518568..518641,518732..518786,518877..519097,519192..519352,519519..519576))
location: region:517645-519576:-1
so has part: feature:519519-519576:-1:exon
so has part: feature:519192-519352:-1:exon
so has part: feature:518877-519097:-1:exon
so has part: feature:518732-518786:-1:exon
so has part: feature:518568-518641:-1:exon
so has part: feature:518344-518416:-1:exon
so has part: feature:518137-518204:-1:exon
so has part: feature:517905-518037:-1:exon
so has part: feature:517645-517797:-1:exon

XP_016654220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519519-519576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519192-519352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:518877-519097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518732-518786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518568-518641:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:518344-518416:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518137-518204:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:517905-518037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:517645-517797:-1:exon

PCHAS_1214900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1214900
old locus tag: PCHAS_121490
so part of: sequence
location: <520745..>522259
location: region:520745-522259:1
so has part: feature:520745-522259:1:exon
subclass of: SO_0000010

3495884
type: Gene
SIO_000068: ncbigene

position:520745:1
position: 520745
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:522259:1
position: 522259
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520745-522259:1:exon

PCHAS_1214900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1214900
old locus tag: PCHAS_121490
product: ribonucleoside-diphosphate reductase small chain, putative
transcript id: XM_016798857.1
SIO_010081: PCHAS_1214900
subclass of: SO_0000673
so part of: PCHAS_1214900
location: join(<520745..520831,520975..521007,521150..521286,521421..522078,522167..>522259)
location: region:520745-522259:1
so has part: feature:520745-520831:1:exon
so has part: feature:520975-521007:1:exon
so has part: feature:521150-521286:1:exon
so has part: feature:521421-522078:1:exon
so has part: feature:522167-522259:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:520745-520831:1:exon

position:520831:1
position: 520831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:520975-521007:1:exon

position:520975:1
position: 520975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521007:1
position: 521007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:521150-521286:1:exon

position:521150:1
position: 521150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521286:1
position: 521286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:521421-522078:1:exon

position:521421:1
position: 521421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522078:1
position: 522078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:522167-522259:1:exon

position:522167:1
position: 522167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1214900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1214900
old locus tag: PCHAS_121490
note: term=annotation;date=20160812;qualifier=removed_pro duct=ribonucleotide reductase small subunit, putative;qualifier=added_product=ribonucleoside- diphosphatereductase small chain, putative;qualifier=added_GO:0009263;qualifier=added_GO:000 5971;qualifier=added_GO:0004748;curatorName=ucb@sanger.ac. uk; pfam_scan;Pfam:PF00268.17; E()=7.2E-61;score=205.9;query 28-296;description=Ribonuc_red_sm; iprscan;InterPro:IPR000358 : Ribonucleotide reductase;Pfam:PF00268; score=9.8E-66;query 28-296;description=Ribonucleotide reductase small subunit family; iprscan;InterPro:IPR009078 : Ferritin/ribonucleotide reductase-like;Superfamily:SSF47240; score=2.03E-64;query 7-305;description=Ferritin-like superfamily
codon start: 1
product: ribonucleoside-diphosphate reductase small chain, putative
translation: MNKEHYHTQEVLLEAQYNDEILKENQFRWVMFPIKYKTFWNYYKEIESLFWTAEDHNFDKDKPFLSSMDQTMLSKLLELLCFYSLKDLHLRDEQAIITSKLLDIIQIPEGRAFYGFQMCMENIHNEVYACIFESYSSDSKKKKEIIDQVLKYESVFKKQNWLYNEFEANIPFYNKLILLYISKVLFNGGLSIVSSYCKENGILPCLTSVYDKIQRDEYLQGDFSVMCCNHLNNKLKYENVLDYFKTAVDLEYNFCVEMLDFDSLKITKDQVKQFLQYLADTMLVNLKYSKHYNSKYPFTWKEFSKIIVSENAKNDSVKKSADLYGAKQITFDEDF
SIO_010081: PCHAS_1214900
subclass of: SO_0000673
so part of: PCHAS_1214900
location: join(520745..520831,520975..521007,521150..521286,521421..522078,522167..522259)
location: region:520745-522259:1
so has part: feature:520745-520831:1:exon
so has part: feature:520975-521007:1:exon
so has part: feature:521150-521286:1:exon
so has part: feature:521421-522078:1:exon
so has part: feature:522167-522259:1:exon

XP_016654221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520745-520831:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520975-521007:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521150-521286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:521421-522078:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:522167-522259:1:exon

PCHAS_1215000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1215000
old locus tag: PCHAS_121500
so part of: sequence
location: <523985..>525492
location: region:523985-525492:1
so has part: feature:523985-525492:1:exon
subclass of: SO_0000010

3495885
type: Gene
SIO_000068: ncbigene

position:523985:1
position: 523985
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:525492:1
position: 525492
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523985-525492:1:exon

PCHAS_1215000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1215000
old locus tag: PCHAS_121500
product: enolase, putative
transcript id: XM_737697.2
SIO_010081: PCHAS_1215000
subclass of: SO_0000673
so part of: PCHAS_1215000
location: join(<523985..524027,524195..>525492)
location: region:523985-525492:1
so has part: feature:523985-524027:1:exon
so has part: feature:524195-525492:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523985-524027:1:exon

position:524027:1
position: 524027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:524195-525492:1:exon

position:524195:1
position: 524195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1215000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1215000
old locus tag: PCHAS_121500
note: term=annotation;date=20110524;qualifier=added_gene_ name=ENO;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF00113.18; E()=9.8E-151;score=500.9;query 151-442;description=Enolase_C; pfam_scan;Pfam:PF03952.12; E()=5.3E-56;score=188.2;query 5-140;description=Enolase_N; iprscan;InterPro:IPR020810 : Enolase, C-terminal;Pfam:PF00113; score=1.0E-150;query 151-442;description=Enolase, C-terminal TIM barrel domain; iprscan;InterPro:IPR020810 : Enolase, C-terminal;SMART:SM01192; score=2.3E-202;query 150-444;description=Enolase, C-terminal TIM barrel domain; iprscan;InterPro:IPR020811 : Enolase, N-terminal;Pfam:PF03952; score=1.0E-55;query 5-140;description=Enolase, N-terminal; iprscan;InterPro:IPR020811 : Enolase, N-terminal;SMART:SM01193; score=2.3E-83;query 5-140;description=Enolase, N-terminal; iprscan;InterPro:IPR036849 : Enolase-like, C-terminal domain superfamily;Superfamily:SSF51604; score=3.67E-128;query 150-443;description=Enolase-like, C-terminal domain superfamily; iprscan;InterPro:IPR020809 : Enolase, conserved site;Prosite:PS00164; score=1.0;query 353-366;description=Enolase, conserved site; iprscan;InterPro:IPR000941 : Enolase;PRINTS:PR00148; score=8.3E-50;query 353-367;description=Enolase; iprscan;InterPro:IPR000941 : Enolase;PRINTS:PR00148; score=8.3E-50;query 382-399;description=Enolase; iprscan;InterPro:IPR000941 : Enolase;PRINTS:PR00148; score=8.3E-50;query 37-51;description=Enolase; iprscan;InterPro:IPR000941 : Enolase;TIGR_TIGRFAMS:TIGR01060; score=1.1E-175;query 5-441;description=Enolase; iprscan;InterPro:IPR000941 : Enolase;PIRSF:PIRSF001400; score=5.0E-190;query 1-443;description=Enolase; iprscan;InterPro:IPR000941 : Enolase;PRINTS:PR00148; score=8.3E-50;query 330-341;description=Enolase; iprscan;InterPro:IPR000941 : Enolase;PRINTS:PR00148; score=8.3E-50;query 113-129;description=Enolase; iprscan;InterPro:IPR000941 : Enolase;PRINTS:PR00148; score=8.3E-50;query 172-185;description=Enolase; iprscan;Superfamily:SSF54826; score=2.79E-51;query 5-144;descript…
codon start: 1
product: enolase, putative
translation: MAHVITRIHAREILDSRGNPTVEVDLETTLGIFRAAVPSGASTGIYEALELRDNDKSRYLGKGVQQAIKNINEVIAPKLIGLDCREQKKIDNMMVQELDGSKTEWGWSKSKLGANAILAISMAICRAGAAANKTSLYKYLAQLAGKDTEKMVLPVPCLNVINGGSHAGNKLSFQEFMIVPVGAPSFKEAMRYGAEVYHTLKSEIKKKYGIDATNVGDEGGFAPNILNAHEALDLLVSAIKKAGYEHKVKIAMDVAASEFYNSDTKTYDLDFKTPNNDKSLVKTGQELVDLYVDLVKKYPIISIEDPFDQDDWEHYAKLTESIGKDVQIVGDDLLVTNPTRIEKALEKKACNALLLKVNQIGSITEAIEACLLSQKNNWGVMVSHRSGETEDVFIADLVAALRTGQIKTGAPCRSERNAKYNQLFRIEESLGANGVFAGEKFRFQLN
SIO_010081: PCHAS_1215000
subclass of: SO_0000673
so part of: PCHAS_1215000
location: join(523985..524027,524195..525492)
location: region:523985-525492:1
so has part: feature:523985-524027:1:exon
so has part: feature:524195-525492:1:exon

XP_742790.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523985-524027:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524195-525492:1:exon

PCHAS_1215100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1215100
old locus tag: PCHAS_121510
so part of: sequence
location: <527425..>528888
location: region:527425-528888:1
so has part: feature:527425-528888:1:exon
subclass of: SO_0000010

3498018
type: Gene
SIO_000068: ncbigene

position:527425:1
position: 527425
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:528888:1
position: 528888
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527425-528888:1:exon

PCHAS_1215100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1215100
old locus tag: PCHAS_121510
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798858.1
SIO_010081: PCHAS_1215100
subclass of: SO_0000673
so part of: PCHAS_1215100
location: <527425..>528888
location: region:527425-528888:1
so has part: feature:527425-528888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527425-528888:1:exon

PCHAS_1215100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1215100
old locus tag: PCHAS_121510
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MHIFSQIFKCNQMNAKQYKGGIHSRNNQVANNSINFDLNKKKTSQKNASFIQNNLKVNTQKQSDNMRNTKTNKINNLELKWNKYLDKVLKLNEYVKLPNSINNEHDKKKWKKAHNLRKKMKEYDLMTRRRLFNNNIVNNKAKLNRERYIVLNRIPRYREAFPSTLDPSNKLKEDIIRTYLKSHACYLVSEMKKNDGNMSFNNTMKINNNTTTLSPYNVTAKSMKNMRKKNVNMNGKGNNHLNYLYNKTRNPSIGEKNNLSYNLWEKSMMKQQNDNKYLKNNNQKQNKKQIYNYRNNATTNSKDNNLKNYNIQINGVYSNLNNNMKKRTVPNTAPKNIHIETDLYNTGKNYNLYDYGQSVILHDEKREDAYEVYPNTPQMDFISKEQNNSLKKYNMHYSTADPKHDLPIQEKFKADHMRDVSNTQYQYSNKSNSNEYVSEYSNNRMGKNYEIYNKKKASCGFKKDRFSLFGRIKHNKDIEVKLLLNKA
SIO_010081: PCHAS_1215100
subclass of: SO_0000673
so part of: PCHAS_1215100
location: 527425..528888
location: region:527425-528888:1
so has part: feature:527425-528888:1:exon

XP_016654222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527425-528888:1:exon

PCHAS_1215200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1215200
old locus tag: PCHAS_121520
so part of: sequence
location: complement(<529689..>530420)
location: region:529689-530420:-1
so has part: feature:529689-530420:-1:exon
subclass of: SO_0000010

3498019
type: Gene
SIO_000068: ncbigene

position:529689:-1
position: 529689
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:530420:-1
position: 530420
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529689-530420:-1:exon

PCHAS_1215200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1215200
old locus tag: PCHAS_121520
product: conserved Plasmodium protein, unknown function
transcript id: XM_739808.2
SIO_010081: PCHAS_1215200
subclass of: SO_0000673
so part of: PCHAS_1215200
location: complement(<529689..>530420)
location: region:529689-530420:-1
so has part: feature:529689-530420:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529689-530420:-1:exon

PCHAS_1215200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1215200
old locus tag: PCHAS_121520
note: tmhmm; query 1-244; ;query 1-27; ;query 225-243; ;query 28-45; ;query 202-224; ;query 46-201
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MEIKYKLNTWSNVDHTYKRVKKKKCKQNIFYLIFLISISLLAYFQSPNFVAYAKINDKEKDAKLDNTPSDTPNNEPIDKENNKLDNEKDNAEENKIDSTINENDYNTNDKIRKELLLQSFNIRSFQEERYKLKFVEKYIVNDPDVLNSDNLIFDAVSSFYNEFVDTYISPPADGDKTGVPSKEREIKINEIKKLILFKFSKYGMVLFFSFFLIKLFFTLVQKLIKFILILILKILKFCCCGGR
SIO_010081: PCHAS_1215200
subclass of: SO_0000673
so part of: PCHAS_1215200
location: complement(529689..530420)
location: region:529689-530420:-1
so has part: feature:529689-530420:-1:exon

XP_744901.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529689-530420:-1:exon

PCHAS_1215300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1215300
old locus tag: PCHAS_121530
so part of: sequence
location: <531892..>533955
location: region:531892-533955:1
so has part: feature:531892-533955:1:exon
subclass of: SO_0000010

3494479
type: Gene
SIO_000068: ncbigene

position:531892:1
position: 531892
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:533955:1
position: 533955
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531892-533955:1:exon

PCHAS_1215300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1215300
old locus tag: PCHAS_121530
product: Rab3 GTPase-activating protein non-catalytic subunit, putative
transcript id: XM_736306.2
SIO_010081: PCHAS_1215300
subclass of: SO_0000673
so part of: PCHAS_1215300
location: <531892..>533955
location: region:531892-533955:1
so has part: feature:531892-533955:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:531892-533955:1:exon

PCHAS_1215300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1215300
old locus tag: PCHAS_121530
note: term=annotation;date=20150825;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=rab3 gtpase-activating protein non-catalytic subunit, putative;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF14655.2; E()=8.3E-14;score=51.4;query 465-638;description=RAB3GAP2_N; iprscan;InterPro:IPR036322 : WD40-repeat-containing domain superfamily;Superfamily:SSF50978; score=5.13E-6;query 483-673;description=WD40-repeat-containing domain superfamily; iprscan;InterPro:IPR032839 : Rab3-GAP regulatory subunit, N-terminal;Pfam:PF14655; score=1.0E-13;query 465-638;description=Rab3-GAP regulatory subunit, N-terminal; iprscan;Superfamily:SSF50960; score=4.58E-5;query 233-568;description=null
codon start: 1
product: Rab3 GTPase-activating protein non-catalytic subunit, putative
translation: MTNDGQSNILNKCEDSGTIDNTNDNTKIIPSHKNVDQSNFIKKENADKGGCPYAAMMGLPDSPADLTKALENDAKKGVPESQEMKDDAPNDVERITKEDLLKEQEMKENVIEGQEMKATVIEDQEMKANGIEGQEMKETVIEGQETKETVIEDKETTQDLASNAEDDMNKTSEDDHIELEEIFALETLMQISNNIFINTHHSITKDDINITNCKVVIYESNNSSPDLNEGDDEFINMLFYFQNKNYIFFLIYCLNKKNVVYLKFFNPLLIEKENIEAINLFFINNCFPHIVLGLNNGKICLYNHEGVICMQNKFFDCKIKKIFLEHNNNYILFLHENNTVINSNANLIKRALESNNKIMPIDYIFTVNKNIPISHIILRYNNTLDSINRELYSVFGKDDLAKYVNICTSEKVDESEENANNFNGYGNPSYVIASKNMTWAILNIIKPNTKMDFLIKRECYGTSEKLSSKINNFIKNIFIKDTEPLSNTPTNKIHINNTNQNTLVNINNNSYPIYAFNTNMIYTFNDPKRQIIDICVCPWNNYLALALDNLGRLCLYNISRLSILYMWKSYRSAFMSFILKKDYNQIARNINNNNSTSITNTNIFYVTATDKSCKKGIFFYIKPRNLIEIWDINTLYKIYGIRTFDDPILFKFFFKDHDIPNDVYFFNTNTHVFVINSKFEVLHIKWV
SIO_010081: PCHAS_1215300
subclass of: SO_0000673
so part of: PCHAS_1215300
location: 531892..533955
location: region:531892-533955:1
so has part: feature:531892-533955:1:exon

XP_741399.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531892-533955:1:exon

PCHAS_1215400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1215400
old locus tag: PCHAS_121540
so part of: sequence
location: complement(<534879..>537743)
location: region:534879-537743:-1
so has part: feature:534879-537743:-1:exon
subclass of: SO_0000010

3493440
type: Gene
SIO_000068: ncbigene

position:534879:-1
position: 534879
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:537743:-1
position: 537743
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534879-537743:-1:exon

PCHAS_1215400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1215400
old locus tag: PCHAS_121540
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798860.1
SIO_010081: PCHAS_1215400
subclass of: SO_0000673
so part of: PCHAS_1215400
location: complement(<534879..>537743)
location: region:534879-537743:-1
so has part: feature:534879-537743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534879-537743:-1:exon

PCHAS_1215400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1215400
old locus tag: PCHAS_121540
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MEKEELKNFSIINNRGIDSPLNASCDNIIDKNGNVIYKNYNNLYKLTYKHVYKYKRITCISTDTIYDHNYNAYTPLYHYYYIDNGLNVNHTKALKEGDQIDDTSNEKVEKREDTEKLEIEQAETCDEYTDECIDEYVDENVYNMKSTKQKCLKYNLYELLLLRFLNYKTDEENDSNDILNRSFFIKENKYIRGGSNKYVRDGYNSNIHDNSFSHNTNNKGEIGVGSTNYNISNSNNNHYGNYDTGNNNNYLGSQNGNFNYTNTYNNNLRTKNGYNHDKFDGPNKHSNISMNNMNNYNSKAFKYIDDNGYNLPLNNIYIDMDGKMHLTEQERNNGSGYNGNMHYGNKYERNGHYQNKDNDHFQYQSHYSQYSPAYEHIDKNDPDRYWDNPSVYGKKNNQEIFTLGDIKKYSKKNERENDMRGRNYNKPNADIINENKKINDDNFVSSRLKIGKETNVNENNQGTHRNNSYTIFKDNDEENLAKSNFAKWFKNNNTDGNDNGDLLKYMNNKNKTGTEIGVRYSNNNNTNPGVVPNNEGGEIYSRLSDSQNYGSSNNNNMNYTYTNESVSNMNNTESKQLSNTVAELVMKQISLIKERNKNMEDIEKQNSLNTYENNWKNSNSFKNGSNIIGQTQDNNLYIKDGGKNIMDILKNLNSNKFSHESMEQEIIRRSTIGIGNEHYGFPINNEQYNYRNNNKQYSMDNSNSKKKFYDNNINEVNKNNMNIDYMMMNKKVGNSSGINNGHTNINDNPNLGSRNNYNSEYYINHDNNINYNSYKNKNTTQGNINITPIINSLLRLENDNAYNDNSRTQAPYINKGDIGVGYSISENIQNAKVNNVLDSLKSLLKASQKDMDGNNIMGSHLGNLAHNLGNNRIYNNSANFNQQKNPVHINKYTNYHSQQYYPAQYKQEYRHHPHSNFNDFNKKKIYKKDKHISKYSKSDIPTNESLTIPLTDEN
SIO_010081: PCHAS_1215400
subclass of: SO_0000673
so part of: PCHAS_1215400
location: complement(534879..537743)
location: region:534879-537743:-1
so has part: feature:534879-537743:-1:exon

XP_016654223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534879-537743:-1:exon

PCHAS_1215500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1215500
old locus tag: PCHAS_121550
so part of: sequence
location: <541765..>543585
location: region:541765-543585:1
so has part: feature:541765-543585:1:exon
subclass of: SO_0000010

3498138
type: Gene
SIO_000068: ncbigene

position:541765:1
position: 541765
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:543585:1
position: 543585
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541765-543585:1:exon

PCHAS_1215500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1215500
old locus tag: PCHAS_121550
product: U4/U6.U5 tri-snRNP-associated protein 1, putative
transcript id: XM_016798861.1
SIO_010081: PCHAS_1215500
subclass of: SO_0000673
so part of: PCHAS_1215500
location: <541765..>543585
location: region:541765-543585:1
so has part: feature:541765-543585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:541765-543585:1:exon

PCHAS_1215500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1215500
old locus tag: PCHAS_121550
note: term=annotation;date=20110426;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=u4/u6.u5 tri-snrnp-associated protein 1, putative;qualifier=added_gene_name=sart1;qualifier=added_g ene_synonym=snu66;qualifier=added_literature=pmid:21245033 ;curatorName=ucb@sanger.ac.uk; term=annotation;date=20150821;qualifier=added_GO:0000481;q ualifier=added_GO:0005634;qualifier=added_GO:0046540;curat orName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF03343.9; E()=3.0E-15;score=55.7;query 523-571;description=SART-1; pfam_scan;Pfam:PF03343.9; E()=2.9E-22;score=78.8;query 7-507;description=SART-1; iprscan;InterPro:IPR005011 : SART-1 protein;Pfam:PF03343; score=8.9E-23;query 6-507;description=SNU66/SART1 family; iprscan;InterPro:IPR005011 : SART-1 protein;Pfam:PF03343; score=2.1E-15;query 523-571;description=SNU66/SART1 family
codon start: 1
product: U4/U6.U5 tri-snRNP-associated protein 1, putative
translation: MSCSEMEKENDNKKSGRGRKKKENASKEAENDVRENDESGQVKTISEEFNDDIDDVQNWVNKTRHAMNKKLEPENIKYSDDEDEEEEDGVSKKGKKKGKKQTKNNKKFSTNLKVQHKNDDIQNDMILTLKDQNVLSDEDDCLVNEELKKQNIKNLVTKNDDNYWNQNYYNPLSYYEDDLKNKNEQADNNTSINMLPKYDDKEHSFDVQVNYNSDEEDNKKKSNIKNRTNKIKKNVEDLKKRSLISTDDVITESGKAIQMKKRKVKNINKRKSDDVWSFLYEDPVNEEKELEQKDGDKTKKEKNTITSNSDSTKRNSNILQDVMEKIKEENMNMEFNYFDDTLLSHNEEEKELYELLEKGNDLKKKKKERINYQNELLKRVVINDDDKKIDDEKNNNTIKLTDASEFCKSIYLPIDMHESIKKSGAKKSGIEIAVSDRANNSNRLSKLNHNDEDEDDKDSIKNDEHDEEIDLSENGVSEIFNEIKLDEGLFGALEYLKTRGELNIEDKVYRNPENKPLHMATDKNDIKIDYKNDTGKVMTPKESFRYISWIFHGKKQGKNKLEKKIKRMEIERRFKENPMESLPTLNILKKVQEVQKKVYFTLSNNG
SIO_010081: PCHAS_1215500
subclass of: SO_0000673
so part of: PCHAS_1215500
location: 541765..543585
location: region:541765-543585:1
so has part: feature:541765-543585:1:exon

XP_016654224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541765-543585:1:exon

PCHAS_1215600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1215600
old locus tag: PCHAS_121560
so part of: sequence
location: complement(<544067..>546395)
location: region:544067-546395:-1
so has part: feature:544067-546395:-1:exon
subclass of: SO_0000010

3498137
type: Gene
SIO_000068: ncbigene

position:544067:-1
position: 544067
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:546395:-1
position: 546395
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544067-546395:-1:exon

PCHAS_1215600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1215600
old locus tag: PCHAS_121560
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798862.1
SIO_010081: PCHAS_1215600
subclass of: SO_0000673
so part of: PCHAS_1215600
location: complement(join(<544067..544195,544329..544555,544703..>546395))
location: region:544067-546395:-1
so has part: feature:544703-546395:-1:exon
so has part: feature:544329-544555:-1:exon
so has part: feature:544067-544195:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544703-546395:-1:exon

position:544703:-1
position: 544703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:544329-544555:-1:exon

position:544329:-1
position: 544329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544555:-1
position: 544555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544067-544195:-1:exon

position:544195:-1
position: 544195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1215600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1215600
old locus tag: PCHAS_121560
note: term=annotation;date=20150821;qualifier=added_GO:00 05737;qualifier=added_literature=pmid:26292257;curatorName =ucb@sanger.ac.uk; ;query 645-645;GPI_cleavage_site_score=0.103199996; iprscan;InterPro:IPR005607 : BSD;SMART:SM00751; score=7.8;query 228-286;description=BSD domain; iprscan;InterPro:IPR005607 : BSD;Prosite:PS50858; score=10.0;query 307-360;description=BSD domain; iprscan;InterPro:IPR005607 : BSD;SMART:SM00751; score=2.9E-6;query 307-360;description=BSD domain
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MEEEKVIESGEVIYNNEKGNLFITNKFLIYISDKTKNEKEASNSLFLIDDIDLKVCIFSWKKTEKSKKKNKIRLTFALTSKKNNFCFHDYNNSESYIFEFLNERNYNTVTEAINYLNKDNLKNHIYIDFNLNLIKNKYNVYEDGQATEGNDQSINIEDEASAYNTPIIIDEYITKETSINDSAKKDDCIIIEDNYDGYNEQYNRGLKANEIDRKNDDGVEMQHEDDDEESEEDYENEMMKECHVVLNKIFESDERLKNLYRMCIENDILDEKEFYKIHKNDIYEHKYILSSNDKSILKEPIYISEEQKISKNVEINKEISKLILSENKKLKKLHDYYIENNILNEGTFWYFLFNNKYSHLFFYDKNEKDIMANKNFLNIQQTNQHSFENLMYNLENVNQDIKGTLEKCILSEYLSTKSSDKKNVIFKNNYYFNEENPEGFGILTNEKLITNNHNSLNLLINKFNNYCIRMVKEKKFTIDQFYDDLNEKINDTNLSDDVNEKKELLFNLEKKKNNLCNLQNEDKDDTKKLLQNKENLDKQFSIFMDDLITNRQNTSKNYSDLFAIGRQLFVLNTKKCQSNQSLLIGTIDYEQHILDIVKEYHVKINYLLNLFYTSYIPEQNKRDKILENLSKIKDEIQAKQEEYNSVLIMGKPLLIHLFEQITICKKFNEKLNKYIQEKRKKT
SIO_010081: PCHAS_1215600
subclass of: SO_0000673
so part of: PCHAS_1215600
location: complement(join(544067..544195,544329..544555,544703..546395))
location: region:544067-546395:-1
so has part: feature:544703-546395:-1:exon
so has part: feature:544329-544555:-1:exon
so has part: feature:544067-544195:-1:exon

XP_016654225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544703-546395:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544329-544555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544067-544195:-1:exon

PCHAS_1215700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1215700
old locus tag: PCHAS_121570
so part of: sequence
location: complement(<547437..>548870)
location: region:547437-548870:-1
so has part: feature:547437-548870:-1:exon
subclass of: SO_0000010

27794961
type: Gene
SIO_000068: ncbigene

position:547437:-1
position: 547437
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:548870:-1
position: 548870
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547437-548870:-1:exon

PCHAS_1215700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1215700
old locus tag: PCHAS_121570
product: survival motor neuron-like protein, putative
transcript id: XM_016798863.1
SIO_010081: PCHAS_1215700
subclass of: SO_0000673
so part of: PCHAS_1215700
location: complement(join(<547437..547869,547982..548297,548514..548694,548835..>548870))
location: region:547437-548870:-1
so has part: feature:548835-548870:-1:exon
so has part: feature:548514-548694:-1:exon
so has part: feature:547982-548297:-1:exon
so has part: feature:547437-547869:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548835-548870:-1:exon

position:548835:-1
position: 548835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548514-548694:-1:exon

position:548514:-1
position: 548514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548694:-1
position: 548694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:547982-548297:-1:exon

position:547982:-1
position: 547982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548297:-1
position: 548297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:547437-547869:-1:exon

position:547869:-1
position: 547869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1215700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1215700
old locus tag: PCHAS_121570
note: term=annotation;date=20130922;qualifier=removed_pro duct=SMN-like protein;qualifier=added_product=survival motor neuron-like protein, putative;qualifier=added_gene_name=smn;qualifier=added_lit erature=pmid:18035357;curatorName=ucb@sanger.ac.uk; iprscan;InterPro:IPR002999 : Tudor;Prosite:PS50304; score=9.354;query 163-221;description=Tudor domain; iprscan;InterPro:IPR002999 : Tudor;SMART:SM00333; score=2.5E-8;query 162-219;description=Tudor domain; iprscan;Superfamily:SSF63748; score=4.74E-8;query 168-213;description=null
codon start: 1
product: survival motor neuron-like protein, putative
translation: MDEFNESLEDLEEKINEYNKQLALVRDEIKKYEQIQNDQNEENEQIQNLKKLECDMIEVINLTRDLIKYKKKNESDDEIPDQIAEENEQPFSNENENVMNESALLIGRTCSFMYENKRVYGSIENVVIQNNMEQLLVHIFETNEQVLVHKNYVQLNEILHTLSTSENNQYQALYKKDGQWYDCLVSKSKGDSYLITYIGYNNSEYVKNDQIRIKKKKKIKEVITPAGYKIPENLIVKENDSLKTKIKKTKKRNALKKKQKNELINQEFANKTQQWKSVHQKAISKSKHLLVAHKKTENIEYTNNPANINIRRKFDYKDNDD
SIO_010081: PCHAS_1215700
subclass of: SO_0000673
so part of: PCHAS_1215700
location: complement(join(547437..547869,547982..548297,548514..548694,548835..548870))
location: region:547437-548870:-1
so has part: feature:548835-548870:-1:exon
so has part: feature:548514-548694:-1:exon
so has part: feature:547982-548297:-1:exon
so has part: feature:547437-547869:-1:exon

XP_016654226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548835-548870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548514-548694:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547982-548297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547437-547869:-1:exon

PCHAS_1215800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1215800
old locus tag: PCHAS_121580
so part of: sequence
location: <550443..>553715
location: region:550443-553715:1
so has part: feature:550443-553715:1:exon
subclass of: SO_0000010

3496327
type: Gene
SIO_000068: ncbigene

position:550443:1
position: 550443
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:553715:1
position: 553715
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550443-553715:1:exon

PCHAS_1215800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1215800
old locus tag: PCHAS_121580
product: Rh5 interacting protein, putative
transcript id: XM_738132.2
SIO_010081: PCHAS_1215800
subclass of: SO_0000673
so part of: PCHAS_1215800
location: <550443..>553715
location: region:550443-553715:1
so has part: feature:550443-553715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550443-553715:1:exon

PCHAS_1215800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1215800
old locus tag: PCHAS_121580
note: term=annotation;date=20110922;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=rh5 interacting protein, putative;qualifier=added_gene_name=ripr;qualifier=added_li terature=pmid:21909261;curatorName=ucb@sanger.ac.uk; term=annotation;date=20160706;qualifier=added_GO:0020009;c uratorName=ucb@sanger.ac.uk; ;query 1055-1055;GPI_cleavage_site_score=0.22039998; iprscan;InterPro:IPR013032 : EGF-like region;Prosite:PS01186; score=1.0;query 693-706;description=EGF-like, conserved site; iprscan;InterPro:IPR000742 : EGF-like, type 3;SMART:SM00181; score=13.0;query 936-973;description=EGF-like domain; iprscan;InterPro:IPR000742 : EGF-like, type 3;SMART:SM00181; score=86.0;query 812-848;description=EGF-like domain; iprscan;InterPro:IPR000742 : EGF-like, type 3;SMART:SM00181; score=24.0;query 764-808;description=EGF-like domain; iprscan;InterPro:IPR000742 : EGF-like, type 3;SMART:SM00181; score=220.0;query 627-668;description=EGF-like domain; iprscan;InterPro:IPR000742 : EGF-like, type 3;SMART:SM00181; score=84.0;query 852-891;description=EGF-like domain; iprscan;InterPro:IPR000742 : EGF-like, type 3;SMART:SM00181; score=51.0;query 672-707;description=EGF-like domain; iprscan;InterPro:IPR000742 : EGF-like, type 3;SMART:SM00181; score=76.0;query 347-384;description=EGF-like domain; iprscan;InterPro:IPR000742 : EGF-like, type 3;SMART:SM00181; score=23.0;query 895-932;description=EGF-like domain
codon start: 1
product: Rh5 interacting protein, putative
translation: MMKRKITTKSFITIFGFILFNLSWCGTKDNILNENNNNILFSLNYKIRDKLYKGKIIYSDGIKTYGYKQKGVSIVIPLIYENKIKDFFSVSDDERSCGYHIYEYGISNNKYNYKCYQNNFCGIIPNNKYITEIENNLLYCAHFNSNEMIIYYISEPELLKPDVIYQELLFLENQKKILINCNTMFIEIVSINSVPSKYCLNDYLLLYALKACTNKTYCYINLSKFNLESCPINDSYSLHIKYKCKESPNLSLSKNDSANSKIKYSERICKYGYNIIQSKLLNKELTYNPKDNINNYRKMISSRCEKNYTCGNKICSVNQYCDEATETCKCKNLGISINQETCEPIDVCQLLNCPQNSICVKDKTTNKAECKCNDNKYYYQNKCYDAHEFEDLLKLNSIEYSQTYIDKLYIGSSLKSEHIFMKCPADFEIEVVTAYVSCYNIPFSLNSVHKKRPTAILKKECNGKNKCTYGNSANHVESLHAPNVCPNGFIYFKYNYLCKQKEDDDEEEDDEEDGDSHLSVKTKNGLQAFSASPTPKYINEHARGTSNENVTSYIKILKNTENSKIECLGGNIKIRSALIKGGLGCGDLNITTAVQKYCNDTSNCDIGSIYKFDTYCINNQYLYVSYECKDLCIYCTSDSSCYGNKFNNRCFCDYPYISKNKENNLVCEIPTSCSSITCRPNEECKNVNGYIYCDCVDGYSIIDGVCQKDIPCFDQCPKNKKCVVEKGKNVCKCINRSPNKKGKPICYDKESDDDYDALYASKNKCKKKEYMNMCNKNKEICVYDINTDKASCECKPHFTRSSKTNECEPGEYCNNVVCKTNEECIYSNGKGECVCKNNFYKNAEGKCVHNNLCTVNNGNCTDQANCIYHEDKPHDCTCKKEGYVFLNNKCVIKDKCSEKSYCSDNSICINVLNKEPICVCTFNYIKKNDVCVLKNPCLFNNGNCPKNSVCKYQSDKTTCTCSENYIQKNNICEPLIDQTYKKFLIKYNEDPFISLGGCGIIYFIYKDNQILWKINSTEESYIFNYTFPKNENVAAHIKNRKTKTILYLEKMENENSTTYDDFVLDHLHCEYTNMFFMPGRNRPPNMPSHA
SIO_010081: PCHAS_1215800
subclass of: SO_0000673
so part of: PCHAS_1215800
location: 550443..553715
location: region:550443-553715:1
so has part: feature:550443-553715:1:exon

XP_743225.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550443-553715:1:exon

PCHAS_1215900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1215900
old locus tag: PCHAS_121590
so part of: sequence
location: complement(<553885..>555033)
location: region:553885-555033:-1
so has part: feature:553885-555033:-1:exon
subclass of: SO_0000010

3496328
type: Gene
SIO_000068: ncbigene

position:553885:-1
position: 553885
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:555033:-1
position: 555033
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553885-555033:-1:exon

PCHAS_1215900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1215900
old locus tag: PCHAS_121590
product: conserved protein, unknown function
transcript id: XM_738133.2
SIO_010081: PCHAS_1215900
subclass of: SO_0000673
so part of: PCHAS_1215900
location: complement(<553885..>555033)
location: region:553885-555033:-1
so has part: feature:553885-555033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553885-555033:-1:exon

PCHAS_1215900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1215900
old locus tag: PCHAS_121590
note: term=annotation;date=20130122;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF10561.5; E()=6.5E-84;score=281.5;query 7-312;description=UPF0565; iprscan;InterPro:IPR018881 : Uncharacterised protein family UPF0565;Pfam:PF10561; score=9.4E-85;query 7-312;description=Uncharacterised protein family UPF0565
codon start: 1
product: conserved protein, unknown function
translation: MPVCFCVHKVTGFNNMINIILYREPILIDKKYDSKYIIFFPGDYSNFFINTIYTYYTCESANECSDYCFSYEALFWVISSKYLYDHIIFIKPSTFVNHFSTFSNFINDDPVSLSPSSQNEVDHKCDKYIDAKGIKHLLFILLSLNDNVIKERNGEDSSIHGSRNNQTDGTLVSASIQKCDNDTNSNKSKDIDSTVNNHKECISNIINIDTVIRKKLILIGFSKGCSVLFSLLREINKADFILPYIESVYFLDPGFNKQIYNTNIESNSLEILSKYNLKIFIHSTPNQIFERNSMTIHKELTNFINMLRNYNIPIFSYFHYINIGKMIDPINLHFEVLEDFSNQSLEKINNISPFINSCNKIGIICLENKKPIDKFLFQNWRM
SIO_010081: PCHAS_1215900
subclass of: SO_0000673
so part of: PCHAS_1215900
location: complement(553885..555033)
location: region:553885-555033:-1
so has part: feature:553885-555033:-1:exon

XP_743226.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553885-555033:-1:exon

PCHAS_1216000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1216000
old locus tag: PCHAS_121600
so part of: sequence
location: complement(<555467..>556693)
location: region:555467-556693:-1
so has part: feature:555467-556693:-1:exon
subclass of: SO_0000010

3485527
type: Gene
SIO_000068: ncbigene

position:555467:-1
position: 555467
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:556693:-1
position: 556693
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555467-556693:-1:exon

PCHAS_1216000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1216000
old locus tag: PCHAS_121600
product: conserved Plasmodium protein, unknown function
transcript id: XM_727493.2
SIO_010081: PCHAS_1216000
subclass of: SO_0000673
so part of: PCHAS_1216000
location: complement(<555467..>556693)
location: region:555467-556693:-1
so has part: feature:555467-556693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:555467-556693:-1:exon

PCHAS_1216000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1216000
old locus tag: PCHAS_121600
note: tmhmm; query 1-409; ;query 1-12; ;query 13-35; ;query 36-408; iprscan;Prosite:PS51257; score=7.0;query 1-32;description=null
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MYVKKKILDFSKSNMFALGLGSTWVLLISGGCIFSLKYFKNFDYRHPYIVDTIKIAKLHLNCTNNDEIKIIKKKGNVDSSNQRAKCEILLSLKGEQFWVNINSINCQKIKNNNNDEEDIDISDYIENPYLIKKTIKSFFYQIKSFIVPFISSNNQVKENNSYDDKNSYSEIYTASQNKKGNIVDKDKETIRIIQEQYPWKINNIIIVKKKKNTTTNEYISNGVIKNVEHGDDKKVDKKNGIPIVNLFYNFKSFINNLFDYNYEIYPIYGNPEENTYYYKYVNKNRAFNKTQKHIGKIMLCAFCLSTMLAIKRIRIYKNSYSGLNYVKNFVLNNKQLFQILGDTQIQILSISGLYKQNYINSKIYFQTSQKNGIVQLTATKNENDKTFTLLHAKLLLKNDVIELKKDNR
SIO_010081: PCHAS_1216000
subclass of: SO_0000673
so part of: PCHAS_1216000
location: complement(555467..556693)
location: region:555467-556693:-1
so has part: feature:555467-556693:-1:exon

XP_732586.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555467-556693:-1:exon

PCHAS_1216100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1216100
old locus tag: PCHAS_121610
so part of: sequence
location: complement(<557891..>562393)
location: region:557891-562393:-1
so has part: feature:557891-562393:-1:exon
subclass of: SO_0000010

3497614
type: Gene
SIO_000068: ncbigene

position:557891:-1
position: 557891
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:562393:-1
position: 562393
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557891-562393:-1:exon

PCHAS_1216100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1216100
old locus tag: PCHAS_121610
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798864.1
SIO_010081: PCHAS_1216100
subclass of: SO_0000673
so part of: PCHAS_1216100
location: complement(<557891..>562393)
location: region:557891-562393:-1
so has part: feature:557891-562393:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:557891-562393:-1:exon

PCHAS_1216100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1216100
old locus tag: PCHAS_121610
note: tmhmm; query 1-1501; ;query 1499-1500; ;query 1476-1498; ;query 1-1475; iprscan;InterPro:IPR035969 : Rab-GTPase-TBC domain superfamily;Superfamily:SSF47923; score=8.11E-5;query 609-703;description=Rab-GTPase-TBC domain superfamily; iprscan;InterPro:IPR035969 : Rab-GTPase-TBC domain superfamily;Superfamily:SSF47923; score=1.07E-6;query 964-1060;description=Rab-GTPase-TBC domain superfamily
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MKSSVKKKRRDIEYDSCVDFESLYKKKKNYKKKYSIYRGKNYSDSEIYNKRRFKIKKRIGYIYIHKHYNIENEKPEKNLCLLDDVIVYKNYFHKYDEEDNEKLKIFKNILKIYENVTNSEKKKLYQIIKSFSYTQGGFQNNQVRQKIWLLLLGFNINLSKNKEYNEHPINILCKKYRNKSIYNNLSNHFKFVWDKSQHQSLRSCETSDDTSHTDDNTLEGSQNNNSNPVSNLETPKHSINNTNYDTHQNEQSEIFTSAFSKEKESNPISNGVENEVKLDSEMKIGDNHNLESMCLRKRKKKCIFASSNTITAFSSDKKDENENLNNIKKKKKKNSIQYSKKEPNELSDKTECPFLFLNEKKYNRNSLYKYISPKIDTDVSCSRHLSNLDEYSSEEFQNKSFSEYSDYSDSSIHSIENKSSASSTLLSPTDYCYKDESDEMSNTLNKKDREKKCPLRFFSSPKSFDYECMMKKIRKQKGAANKYSKIIKLYFEKKLNKVKKKKTRCPFGNINKKTKRFIKKNSKQVVNLLLNFEDRNKNDNYDKKSNKNFIIKLLKIIYGNILQVDIYIVDHIINKYKPSDIKNDVNVNLTSLYLQNSIKYNYDLNSNLNKWLIDSVLLEENERVQVKKDVKRSVNTWDIHKNIIYEIKKRYQYILKNIICSILYKHSNKIYYAQGVHDVCLVFITVYFHKFFMKYQKYVFLEHFIYKYAINKICRNIFEKNYNPTRVPLHKQNDCMTQTNKNNTAIDFIHPFSACCQFSAPSEEYIHCQTGLDDPTSSNLYKAKKNKLINTHSENNRTTNINIGKRKKQKEDDQYDILQNNISNMFLVEEEYIEKICILNNIKIEKYIKYKKKKKKKEYIVYLLCERFLLFYMIDYLTLSLDVSIKNTFKGVGLLLRYLDAEVYNVFCILQKEQERENKKHTSHYNAKKNNGNQQKELQNKNDEKDKDSNTIKKKNSLQLSGTEFFFCLSWVVTYYSHVLTEFDKLARLFDILLSNDGVFIIYFTSSIILHKKKELLEIAEKKKKCLLYNSMYTEIHYIFQNLNWKEINVESIINKTYYYMTHKIPFDKFLKEIKKKISFPPFSPIYSSPFILYYYNYQSKQKEKKNKAIQRSLINFYNYSHGEKCNKELEKSSIETDESENSNTINQTQSIDSSSNMNISDDTDDFKTPKMKSNTFNKKNSYEGKCPFKEKEMDQTDNQEKLNEIPKMNLKEDKNCDIINMNKQNKRKGKYKNSKHHSKKGNVYLYYPYYILYKHIDIYKEIIKKHILVENFFQYIYYEFIINYKEICKKYDVYLTDQFYAMQYISNKNHDYIKEIKKKKKMEKIIYNMTKSITYLCADKYSQKDRKKLKPIFFNFVKLDENFLLPYTNLLESEKNDVEADIFDYFSRFNNSYFSYYINKYSKKYTGKNDKDDYIGIIPPIYKYIIEDSKIMKVWGHEGIKDFIDITPTKKKGSLRKNKKKLNHIYYILKTSIHNYTYSNFFFIFFLISVFSSFWYFRR
SIO_010081: PCHAS_1216100
subclass of: SO_0000673
so part of: PCHAS_1216100
location: complement(557891..562393)
location: region:557891-562393:-1
so has part: feature:557891-562393:-1:exon

XP_016654227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:557891-562393:-1:exon

PCHAS_1216200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1216200
old locus tag: PCHAS_121620
so part of: sequence
location: <563966..>564555
location: region:563966-564555:1
so has part: feature:563966-564555:1:exon
subclass of: SO_0000010

27794962
type: Gene
SIO_000068: ncbigene

position:563966:1
position: 563966
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:564555:1
position: 564555
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563966-564555:1:exon

PCHAS_1216200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1216200
old locus tag: PCHAS_121620
product: translation machinery-associated protein 7, putative
transcript id: XM_016798865.1
SIO_010081: PCHAS_1216200
subclass of: SO_0000673
so part of: PCHAS_1216200
location: join(<563966..563983,564162..564259,564507..>564555)
location: region:563966-564555:1
so has part: feature:563966-563983:1:exon
so has part: feature:564162-564259:1:exon
so has part: feature:564507-564555:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:563966-563983:1:exon

position:563983:1
position: 563983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564162-564259:1:exon

position:564162:1
position: 564162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564259:1
position: 564259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:564507-564555:1:exon

position:564507:1
position: 564507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1216200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1216200
old locus tag: PCHAS_121620
note: term=annotation;date=20130122;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=translation machinery-associated protein 7, putative;qualifier=added_gene_name=tma7;curatorName=ucb@sa nger.ac.uk; pfam_scan;Pfam:PF09072.6; E()=2.7E-8;score=34.4;query 6-50;description=TMA7; iprscan;InterPro:IPR015157 : Translation machinery associated TMA7;Pfam:PF09072; score=3.1E-8;query 6-50;description=Translation machinery associated TMA7
codon start: 1
product: translation machinery-associated protein 7, putative
translation: MPLNIQGGKKKPLKAAKKGPVELTEEDIAFKKEMAEKKKAEEEAKQKLLKAKKK
SIO_010081: PCHAS_1216200
subclass of: SO_0000673
so part of: PCHAS_1216200
location: join(563966..563983,564162..564259,564507..564555)
location: region:563966-564555:1
so has part: feature:563966-563983:1:exon
so has part: feature:564162-564259:1:exon
so has part: feature:564507-564555:1:exon

XP_016654228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:563966-563983:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564162-564259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:564507-564555:1:exon

PCHAS_1216300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1216300
old locus tag: PCHAS_121630
so part of: sequence
location: <566091..>567307
location: region:566091-567307:1
so has part: feature:566091-567307:1:exon
subclass of: SO_0000010

3494294
type: Gene
SIO_000068: ncbigene

position:566091:1
position: 566091
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:567307:1
position: 567307
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566091-567307:1:exon

PCHAS_1216300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1216300
old locus tag: PCHAS_121630
product: 40S ribosomal protein S3A, putative
transcript id: XM_736121.2
SIO_010081: PCHAS_1216300
subclass of: SO_0000673
so part of: PCHAS_1216300
location: join(<566091..566253,566682..>567307)
location: region:566091-567307:1
so has part: feature:566091-566253:1:exon
so has part: feature:566682-567307:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:566091-566253:1:exon

position:566253:1
position: 566253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:566682-567307:1:exon

position:566682:1
position: 566682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1216300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1216300
old locus tag: PCHAS_121630
note: pfam_scan;Pfam:PF01015.14; E()=8.1E-86;score=286.7;query 15-221;description=Ribosomal_S3Ae; iprscan;InterPro:IPR001593 : Ribosomal protein S3Ae;Pfam:PF01015; score=1.5E-85;query 15-221;description=Ribosomal protein S3Ae; iprscan;InterPro:IPR001593 : Ribosomal protein S3Ae;SMART:SM01397; score=1.9E-115;query 15-221;description=Ribosomal protein S3Ae
codon start: 1
product: 40S ribosomal protein S3A, putative
translation: MAVGKNKRTSKGKKGGKKKVTDVFTKKEWYDLNAPNVFMVRKFGKTLVTKTIGKKLATDGLKGRIYEVNLADLNNDEDQAHKKIKLICDHIVNRDCYTDFCGLSITRDKLCSLIRKGYTLIEGCTDVKTIDNYHLRMFCIAFTKKRPNQTKTTCYAQTSQIKKIRKKMVDIMHAEASKVLLKDLVKKIIPESIGKEVEKQCKKIFPLQNVLIRKVKILKRPKLDISKLMELHTDPKDDSGKNVKSLPESKEATNILTAELKH
SIO_010081: PCHAS_1216300
subclass of: SO_0000673
so part of: PCHAS_1216300
location: join(566091..566253,566682..567307)
location: region:566091-567307:1
so has part: feature:566091-566253:1:exon
so has part: feature:566682-567307:1:exon

XP_741214.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:566091-566253:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566682-567307:1:exon

PCHAS_1216400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1216400
old locus tag: PCHAS_121640
so part of: sequence
location: complement(<567789..>568822)
location: region:567789-568822:-1
so has part: feature:567789-568822:-1:exon
subclass of: SO_0000010

3493912
type: Gene
SIO_000068: ncbigene

position:567789:-1
position: 567789
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:568822:-1
position: 568822
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567789-568822:-1:exon

PCHAS_1216400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1216400
old locus tag: PCHAS_121640
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798867.1
SIO_010081: PCHAS_1216400
subclass of: SO_0000673
so part of: PCHAS_1216400
location: complement(join(<567789..567835,567929..567992,568119..568249,568399..568611,568723..>568822))
location: region:567789-568822:-1
so has part: feature:568723-568822:-1:exon
so has part: feature:568399-568611:-1:exon
so has part: feature:568119-568249:-1:exon
so has part: feature:567929-567992:-1:exon
so has part: feature:567789-567835:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:568723-568822:-1:exon

position:568723:-1
position: 568723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:568399-568611:-1:exon

position:568399:-1
position: 568399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568611:-1
position: 568611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:568119-568249:-1:exon

position:568119:-1
position: 568119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568249:-1
position: 568249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:567929-567992:-1:exon

position:567929:-1
position: 567929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567992:-1
position: 567992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:567789-567835:-1:exon

position:567835:-1
position: 567835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1216400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1216400
old locus tag: PCHAS_121640
note: query 148-148;GPI_cleavage_site_score=0.3306
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MSSIIDKNKKKEEIHFLKAKELKEKIESIKNDLEAKTKLISELKEQRIDKIKNIKELEIKNNTNYKSFINEYENILNEYQNIENEIYEMLGDLASLSEKSYNEILELREENKNILMSKDLVIEKIKKELQDQMEMIDLEMSKHSNMLNSLLLKIGDIFKKTHVQYQNDEELRPLLIRLKSIGKS
SIO_010081: PCHAS_1216400
subclass of: SO_0000673
so part of: PCHAS_1216400
location: complement(join(567789..567835,567929..567992,568119..568249,568399..568611,568723..568822))
location: region:567789-568822:-1
so has part: feature:568723-568822:-1:exon
so has part: feature:568399-568611:-1:exon
so has part: feature:568119-568249:-1:exon
so has part: feature:567929-567992:-1:exon
so has part: feature:567789-567835:-1:exon

XP_016654229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568723-568822:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568399-568611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568119-568249:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567929-567992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:567789-567835:-1:exon

PCHAS_1216500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1216500
old locus tag: PCHAS_121650
so part of: sequence
location: <570219..>577449
location: region:570219-577449:1
so has part: feature:570219-577449:1:exon
subclass of: SO_0000010

3489555
type: Gene
SIO_000068: ncbigene

position:570219:1
position: 570219
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:577449:1
position: 577449
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570219-577449:1:exon

PCHAS_1216500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1216500
old locus tag: PCHAS_121650
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798868.1
SIO_010081: PCHAS_1216500
subclass of: SO_0000673
so part of: PCHAS_1216500
location: join(<570219..577204,577326..>577449)
location: region:570219-577449:1
so has part: feature:570219-577204:1:exon
so has part: feature:577326-577449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:570219-577204:1:exon

position:577204:1
position: 577204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:577326-577449:1:exon

position:577326:1
position: 577326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1216500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1216500
old locus tag: PCHAS_121650
note: term=structural;date=20111002;qualifier=method_exon =changed gene model, changed coordinates of exon 2 based on RNASeq;curatorName=ucb@sanger.ac.uk; ;query 1407-1796; ;query 1839-2218; ;query 1384-1406; ;query 1797-1814; ;query 1819-1838; ;query 2219-2241; ;query 1-1383; ;query 1815-1818; ;query 2242-2369; ;query 2343-2343;GPI_cleavage_site_score=0.13679999; tmhmm; query 1-2370
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MNNNNNRKNYNNNFFNEYENDKKELYKKNPNDLTSRHVGNNNDNINNNAQNIGHKRNNNTSGNWNNYNNNRMYGSSNGLNKGNKNIPIKRNLINGKPNKSMEHIKNNIIRNKIIKNYNFASNTSSNNIYNNTVHKNEFRKNAENNQNPLIQQRPKSSHFDDNKKITQENKSVYNIHNINNSNLKNAGNDMVNANNNIYNNPDFFKKNDNSKKGLINNNPNVPLMERKDKNKKVYDYSQSSSFKGYSNLNKEKKNTTYFQTNESDTGLSQYSSASLYNKNNEQSYGNNVTKTLYNNKIVSSHIKFDNSQNENYNFGTETESRGLYSNKKSNDVYKNISENMNNYGLQTNNNFNQKNDYLSGQTSESHNKNISNIDKADESLEKKIYQTISNNKEALDILSKYFKNINGNMDPATLNNIILECKNNKVLVNILNGIKEEMNNNSLDKLKNISHDKAGTYNVENAQHAKQLFKSADLDDIKNKWNMCIIKYKDKNVYSIFNNVENSLNANTKNVEIFKSPLFCNNNYHLSKNIFYNNYKIVLIHNVKYLLLENIFSFKVGSEKKNNSNTSVENADNNKTNANEPTSPFPTISYADSSFDNFCLFFNNYYQISEWYRNKLFFFLVYKIIIMDEEEEEYHSYYSIFLKILDKNTFVFFLSVLINIMKNYSLKLKYMINVIERLLPVLAKKKEQKKKNLKNSQNKNNSIPNSYTGSSTKKYILFNILYFKLLRLLFYKIENYYIQKKHLLLLFLRYIKNFLLNICNSTIIIQYLFIKCIDLMNKYNNQQYILIKTISMEILLQLWNNEFLKLSILKMGKSIIRFIIFISNVEYVNKNIFPFIISSIETTNQTDAYNYISSSIQNNKYYKQKKKRLKHFLYYFKHHNVLSLYHDEDQINKTTISFEENIEDAKVGSPINIEQNAIYGNTLFDLILQIKGSYNYFNVLISKKEKVCLDFLLNMNNLNPNFHFHLFYETFIQNNLSNLVNENKLVYYFEWALTKDRLKRCENNEADKQNDSNLGIKIKGITSLNGGLKEEGNSTSLQNKRRNNFIENENNFAKKVKHTDVVSDNYDSCIMNDENEIDENLLNYYEGVENKNCNKQANEKVMYCLYELFKKNDGILSKIYCSHIKLSFFFNIFFYKSNEMSRILSSSLSTYSRKYKNFKRDNQKIIKFMNINNITHFLIVKFLLKYVGKIKCNDDSTNVKDIKNKEMTSNLDKDIFACYKILEHSLKTDISNTNSFLNYINKIILHLYEKKRENIVLSLIISFSIYNFISYIEGSDNKKVVIENMEELKLADIVNGIYQHCLIGQLLKGNNYFIDNETSVINLDDIYNYELTNHMKIIPKNINKEIFDLVNYKKYIFQKGNYKKIEAIKISKKNMINNLYTSEILNYIYYNVLYIVIHLIMNIRFYYTIFFNTYKKNIYQFSKKRCFIFKSEDKGKYTIKTSDYDTQSLEDNPDLDKFLSQTSQKDIANSDDKYIFLKFQRENDHNYVEKKKIIIKYYKSVKKNIIKNLKQYILVNNSHNYVKGFMQDSLYFNMLLAFYKSPICMQSVSFCLCSNSGISTEFDFNLKTLSQINDIFSFVHQVNKIVYLVVHKGLSIHKEIVCTLNNCMLDNDSIDCNKFCAEFVFYEIVTASYSLNKHTKCDTVNDKSNYNNDETKERDINSHGTYTSDNNEGDGDRDGGEPKTNNSNVCTSPRFGKDSNWLFRFSYKNDKKKAAYFNELLDYIVYSVNNSYKKERTLFWSEFFYSLKNYGIINFQIFFYLCSMLKMARNVESELRDEIKNKQVAIMKRKIKIVEKIYILYLFKIGFILNMSIYETFDFLFSIITIIFNYNFFSFYMIKKVYKIDKDKESIAKSFASYIEKEIENIIYNYDQTIFIEAIKHINDSIFLRKSIKNLILKSYSYINIIMHILPLKNIIIDMNNITYIQINNDKNNKIDTLLEQYKVQKFDNRMKNIDDECEKDDHETYEESMCSEKFSSSSNDEFEKLDNSLEYFSSHLNYN…
SIO_010081: PCHAS_1216500
subclass of: SO_0000673
so part of: PCHAS_1216500
location: join(570219..577204,577326..577449)
location: region:570219-577449:1
so has part: feature:570219-577204:1:exon
so has part: feature:577326-577449:1:exon

XP_016654230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:570219-577204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577326-577449:1:exon

PCHAS_1216600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1216600
old locus tag: PCHAS_121660
so part of: sequence
location: complement(<577904..>581560)
location: region:577904-581560:-1
so has part: feature:577904-581560:-1:exon
subclass of: SO_0000010

3498773
type: Gene
SIO_000068: ncbigene

position:577904:-1
position: 577904
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:581560:-1
position: 581560
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577904-581560:-1:exon

PCHAS_1216600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1216600
old locus tag: PCHAS_121660
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798869.1
SIO_010081: PCHAS_1216600
subclass of: SO_0000673
so part of: PCHAS_1216600
location: complement(<577904..>581560)
location: region:577904-581560:-1
so has part: feature:577904-581560:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:577904-581560:-1:exon

PCHAS_1216600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1216600
old locus tag: PCHAS_121660
note: tmhmm; query 1-1219; ;query 790-1098; ;query 1169-1218; ;query 767-789; ;query 1099-1121; ;query 1151-1168; ;query 1-766; ;query 1122-1150; pfam_scan;Pfam:PF00350.19; E()=9.6E-7;score=28.9;query 298-504;description=Dynamin_N; iprscan;InterPro:IPR027417 : P-loop containing nucleoside triphosphate hydrolase;Superfamily:SSF52540; score=1.34E-13;query 291-526;description=P-loop containing nucleoside triphosphate hydrolase; iprscan;InterPro:IPR022812 : Dynamin superfamily;Pfam:PF00350; score=5.5E-7;query 298-504;description=Dynamin superfamily
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MYINQENDENDENNKINPNTYKNILHNRKNKLGIINNNTLLRKRDAKGIGNNYDCKKEFDKTNNNNFNNENECLLENEEEEDDDDEDDDYEIDENDEEEDDDVFCEDEYDDETREINFNSYNNYYYETNNEKEEEANFLEKNIASDAEKDDILFEKYDKLIKKYKRKKETKIDKFVKKETTNDESYSCYSFNSKGEYTHTNRYSGAKDGYRKSRQTEIETQEDADEIIDDEVAEEDDSHFSNEVLDRIEEIYYKDTKYKKLESVNNSNNNICVNDLNLNIISNYLNVDISVFSKKTTVLLLGNPQSGKSSFINWFTESYVQNTNRIPKGNQMTYIDVKRNYRFNFKNFKNSNYQLGLDKFHENYYNDRYSGDNEYRDNYYGHGCMGENDKNVILSGENCFNIFRPFKKLKEKSKNLKNYIYGKLCYQNKITKYMNRVNSVSFIDTSGITDADDNDYDELILNMSKYVDIIFVFIDSNTHSISNRLLKIMNYLLQNQISKVTICITRIDIIEKINLYRVVFYLTQHFLRNLNIFKQHINMASSYENSEELEYNRNLDIFQNEDIKENKKRDQIEKMLKRIITNKNINETKNAILKSGEYPISDDRTNMQYNIDHKINKHDEEYFHQGKVHRPYIHDTIDNNLKYLNSKGYYVDSDIDQIDEEQEESIFKKILTKSYNSFKDKILNVNNESDNIIDNQIEDEACHVKRKTRTRHRDNKTYDEFSPHGNKKERRQNINSARDMDEDKVKNQIDKIFENKINYGDCLKNMSIFVLVLLYEVVTTIYSLVHSSINTYLNTKERKIINVEKIYKLDKANKLKYNINNLNDSYKILEFLTIYLPEIPHDVLKREKWTHQKPPLMFPKTGKHMNRYSCHGDYKYSNQYAGPNIERELNEVNDLIHSTGNNNIRMYRNNNYNGPNKNIYERHGKHYPERRSIPEDFSPHDKSVNSYINKNRHNKNNYNKINELSLFDTEQIDEVSSRHTKHNRNEDTDLKYESEIKRGSYASIDKYNKYTDYESVNRFSPENNYNNRNRIRNDDIKELNMLNDLLYKIDEGIDLKTNQSIYMLKRDLEKIQNTCLRKIIDNNEVIQKNKSLRFQNIKLYFFKYITIFCGFIISILRYDFLVYFNFIKPKILLSIFSKYFIFLSSYNKNSFFVALNILLVIIYVVIYFRYNKRNYFKSLDKSDMNKLKIILLFTQIIFDEINQLHLRLIGKGGRNSRS
SIO_010081: PCHAS_1216600
subclass of: SO_0000673
so part of: PCHAS_1216600
location: complement(577904..581560)
location: region:577904-581560:-1
so has part: feature:577904-581560:-1:exon

XP_016654231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:577904-581560:-1:exon

PCHAS_1216700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1216700
old locus tag: PCHAS_121670
so part of: sequence
location: <583322..>584293
location: region:583322-584293:1
so has part: feature:583322-584293:1:exon
subclass of: SO_0000010

27794963
type: Gene
SIO_000068: ncbigene

position:583322:1
position: 583322
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:584293:1
position: 584293
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583322-584293:1:exon

PCHAS_1216700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1216700
old locus tag: PCHAS_121670
product: iron-sulfur assembly protein, putative
transcript id: XM_016798870.1
SIO_010081: PCHAS_1216700
subclass of: SO_0000673
so part of: PCHAS_1216700
location: <583322..>584293
location: region:583322-584293:1
so has part: feature:583322-584293:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583322-584293:1:exon

PCHAS_1216700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1216700
old locus tag: PCHAS_121670
note: pfam_scan;Pfam:PF01521.16; E()=2.6E-6;score=27.4;query 205-318;description=Fe-S_biosyn; iprscan;InterPro:IPR000361 : HesB/YadR/YfhF;Pfam:PF01521; score=2.2E-6;query 205-318;description=FeS cluster biogenesis; iprscan;InterPro:IPR035903 : HesB-like domain superfamily;Superfamily:SSF89360; score=1.24E-17;query 200-309;description=HesB-like domain superfamily; iprscan;InterPro:IPR016092 : FeS cluster insertion;TIGR_TIGRFAMS:TIGR00049; score=3.6E-20;query 205-322;description=FeS cluster insertion protein; iprscan;InterPro:IPR017870 : FeS cluster insertion, C-terminal, conserved site;Prosite:PS01152; score=1.0;query 304-321;description=FeS cluster insertion, C-terminal, conserved site
codon start: 1
product: iron-sulfur assembly protein, putative
translation: MRKDEWKKIGVRNFIKMYKAIWKAHLYNFNVNNFLRHNIKTKHCNVYKNEKPHYSTYVESVKNAKNMHSAKYTLLLNQKKNIYNTGGNLQNLQYQKHFSFDAGIDKNEIVKPFENGHAKIREYMLNNSNEFVSSGIENSTQFQNSQKYYIDDKELPNKGDENNKKIKKIDKEMKNNKELYSKDENESETKLEQLLKKRNVKKDIIKITEKAKYEIKRIIEINNKQNKNNNYVLKLYFIAKGCNGLTHSFNFINKNDIKENDEIIYENDNNTEKKNILLVIDSNCILYVINTILDYYKDDLTENFIFTNPNITSICPCGTSFHF
SIO_010081: PCHAS_1216700
subclass of: SO_0000673
so part of: PCHAS_1216700
location: 583322..584293
location: region:583322-584293:1
so has part: feature:583322-584293:1:exon

XP_016654232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:583322-584293:1:exon

PCHAS_1216800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1216800
old locus tag: PCHAS_121680
so part of: sequence
location: complement(<584621..>586990)
location: region:584621-586990:-1
so has part: feature:584621-586990:-1:exon
subclass of: SO_0000010

3496407
type: Gene
SIO_000068: ncbigene

position:584621:-1
position: 584621
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:586990:-1
position: 586990
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584621-586990:-1:exon

PCHAS_1216800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1216800
old locus tag: PCHAS_121680
product: regulator of initiation factor 2, putative
transcript id: XM_016798871.1
SIO_010081: PCHAS_1216800
subclass of: SO_0000673
so part of: PCHAS_1216800
location: complement(join(<584621..584701,584885..>586990))
location: region:584621-586990:-1
so has part: feature:584885-586990:-1:exon
so has part: feature:584621-584701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584885-586990:-1:exon

position:584885:-1
position: 584885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:584621-584701:-1:exon

position:584701:-1
position: 584701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1216800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1216800
old locus tag: PCHAS_121680
note: query 689-689;GPI_cleavage_site_score=0.11399999; pfam_scan;Pfam:PF07065.10; E()=1.5E-22;score=80.1;query 297-613;description=D123; iprscan;InterPro:IPR009772 : D123;Pfam:PF07065; score=3.2E-23;query 297-612;description=Cell division cycle protein 123
codon start: 1
product: regulator of initiation factor 2, putative
translation: MGIVDKEENNNGHYKCDTTEREGQKNRNSLTYLFEKNVIILDSFITTYLMTYFKDVEICLNNNKVNDTFLNYLKEQVENLHEQLRNNNEQCRNEDSNKSVENVNNEVISKDIYEHVENIHLDMLFLLYTNDEVEYKYNIIKMGIHICVEKKKIYISSGECLLVNKTWDGNVDKIMNPEQVTTKNTSDIINIKNDDLNKEGNKLVMVLKDGCNISEENKNKILNHLISNIKLHFFREEKEVLIGIQKTYNKIYDKSMSNLSINNSLSCISNFFFKMYEPDFYNCSIHKKNKICYKNLYDKYNDIMIKSKIIKLNKEMIKYLLIDSIFIPSYVKKNTYKNIDEDVYSSFSSYSDNTSLSSTSHNEQSSSSKSYDHSLLSDEEENDTALQTSVNNKREDDLTELPTTNKDTKTSENNKPSERKRKRGNALFYNKNFRTILDIIKNSIDEFSNSVFIRVDGRNLKKGAFVNNSNLEINTLYDALLILKSCTSVYKELKENEVKKNEHYLIISKYVNINICFLFEVYIYEKKIISISQKYLNHYFNFLNDINIIIDIINSIKQFYETKLKNTFEYENYKCLLYIHTFKKTKKKKIILINAKSWAYKNKHPIYTNSFLKSYIYTNNKGVLVDDYNYLKHGIQKYAIPFTNAGKKENGNADEIENGNADLNKDNIIHNNHDLYFYDGILYYCIVKNDAILKKNENTFPKDLNYIKDGEIDIDTLMETIKKENNIQ
SIO_010081: PCHAS_1216800
subclass of: SO_0000673
so part of: PCHAS_1216800
location: complement(join(584621..584701,584885..586990))
location: region:584621-586990:-1
so has part: feature:584885-586990:-1:exon
so has part: feature:584621-584701:-1:exon

XP_016654233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:584885-586990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584621-584701:-1:exon

PCHAS_1216900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1216900
old locus tag: PCHAS_121690
so part of: sequence
location: <589128..>590786
location: region:589128-590786:1
so has part: feature:589128-590786:1:exon
subclass of: SO_0000010

3486982
type: Gene
SIO_000068: ncbigene

position:589128:1
position: 589128
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:590786:1
position: 590786
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589128-590786:1:exon

PCHAS_1216900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1216900
old locus tag: PCHAS_121690
product: diacylglycerol O-acyltransferase, putative
transcript id: XM_728915.2
SIO_010081: PCHAS_1216900
subclass of: SO_0000673
so part of: PCHAS_1216900
location: <589128..>590786
location: region:589128-590786:1
so has part: feature:589128-590786:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:589128-590786:1:exon

PCHAS_1216900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1216900
old locus tag: PCHAS_121690
note: term=annotation;date=20121229;qualifier=removed_pro duct=acyl CoA:diacylglycerol acyltransferase, putative;qualifier=added_product=diacylglycerol o-acyltransferase, putative;qualifier=added_gene_name=dgat;qualifier=added_li terature=pmid:15110461;qualifier=added_ec_number=2.3.1.20; curatorName=ucb@sanger.ac.uk; ;query 1-40; ;query 101-220; ;query 271-341; ;query 409-455; ;query 511-521; ;query 41-58; ;query 81-100; ;query 221-243; ;query 248-270; ;query 342-361; ;query 389-408; ;query 456-478; ;query 488-510; ;query 522-544; ;query 59-80; ;query 244-247; ;query 362-388; ;query 479-487; ;query 545-552; tmhmm; query 1-553; pfam_scan;Pfam:PF03062.15; E()=5.9E-22;score=78.3;query 296-533;description=MBOAT; iprscan;InterPro:IPR004299 : Membrane bound O-acyl transferase, MBOAT;Pfam:PF03062; score=6.1E-22;query 296-533;description=Membrane bound O-acyl transferase, MBOAT; iprscan;InterPro:IPR014371 : Sterol O-acyltransferase, ACAT/DAG/ARE types;PIRSF:PIRSF000439; score=3.9E-6;query 2-114;description=Sterol O-acyltransferase, ACAT/DAG/ARE types; iprscan;InterPro:IPR014371 : Sterol O-acyltransferase, ACAT/DAG/ARE types;PIRSF:PIRSF000439; score=64.0;query 114-216;description=Sterol O-acyltransferase, ACAT/DAG/ARE types; iprscan;InterPro:IPR014371 : Sterol O-acyltransferase, ACAT/DAG/ARE types;PIRSF:PIRSF000439; score=4.8E-112;query 200-551;description=Sterol O-acyltransferase, ACAT/DAG/ARE types
codon start: 1
product: diacylglycerol O-acyltransferase, putative
translation: MNDENDKTKKYIGRPLFENLHKKKQISLLTHKFGDTNLKGFCNLFLIIIIIINFRIILENIKKYGFDSIPIPSRYYITKNLPILICFICLHISIVFSWIIERYFFCWICNYFLSKNGKATKIFVKDNFNIDEACNNKLSDYEFSKNEKYSQIVEKSTSNYENNNVHKRIKQNDQDGVNTLEEKNVGANYSNNSDQPNTEQAKFSEHTEGKTSEWKHVNFSIFLLRCINSMFMLIFPYMMVMQYETEPILASILLTTSIVWFFKTYSFHHVCYDTRKLYIEGTNLNTLDDSLGDINYIKSYPYCLQFKSYYTYIFMPTMCFQYTYPRTEQINWRFVFKHMTEAIISLLIINILTNEYILVIIEETFKMKEFKSPNLTIQFIHIIESMLKVSILTIYIWMLGFFVLFHNWCNMLAEITKFGDRLFYKDWWNASSFGEYWRKWNLPVYYFVYRHVNRPLIYYGVSRKLSMIIIFIISALLHEYLVTIPLKIQFSGYIFFFFTGQIPLMHLTNSDYFKKNKNIGNLFFWIVFCIIGQPLILFTYYYLWTHKKIELP
SIO_010081: PCHAS_1216900
subclass of: SO_0000673
so part of: PCHAS_1216900
location: 589128..590786
location: region:589128-590786:1
so has part: feature:589128-590786:1:exon

XP_734008.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589128-590786:1:exon

PCHAS_1217000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1217000
old locus tag: PCHAS_121700
so part of: sequence
location: <592053..>595958
location: region:592053-595958:1
so has part: feature:592053-595958:1:exon
subclass of: SO_0000010

3493652
type: Gene
SIO_000068: ncbigene

position:592053:1
position: 592053
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:595958:1
position: 595958
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592053-595958:1:exon

PCHAS_1217000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1217000
old locus tag: PCHAS_121700
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798872.1
SIO_010081: PCHAS_1217000
subclass of: SO_0000673
so part of: PCHAS_1217000
location: join(<592053..592062,592219..593609,593749..593790,593966..594055,594187..594272,594422..594503,594589..594653,594741..594803,594937..595088,595202..595236,595408..595436,595554..595608,595699..595756,595843..>595958)
location: region:592053-595958:1
so has part: feature:592053-592062:1:exon
so has part: feature:592219-593609:1:exon
so has part: feature:593749-593790:1:exon
so has part: feature:593966-594055:1:exon
so has part: feature:594187-594272:1:exon
so has part: feature:594422-594503:1:exon
so has part: feature:594589-594653:1:exon
so has part: feature:594741-594803:1:exon
so has part: feature:594937-595088:1:exon
so has part: feature:595202-595236:1:exon
so has part: feature:595408-595436:1:exon
so has part: feature:595554-595608:1:exon
so has part: feature:595699-595756:1:exon
so has part: feature:595843-595958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:592053-592062:1:exon

position:592062:1
position: 592062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:592219-593609:1:exon

position:592219:1
position: 592219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593609:1
position: 593609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:593749-593790:1:exon

position:593749:1
position: 593749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593790:1
position: 593790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:593966-594055:1:exon

position:593966:1
position: 593966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594055:1
position: 594055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:594187-594272:1:exon

position:594187:1
position: 594187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594272:1
position: 594272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:594422-594503:1:exon

position:594422:1
position: 594422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594503:1
position: 594503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:594589-594653:1:exon

position:594589:1
position: 594589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594653:1
position: 594653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:594741-594803:1:exon

position:594741:1
position: 594741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594803:1
position: 594803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:594937-595088:1:exon

position:594937:1
position: 594937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595088:1
position: 595088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:595202-595236:1:exon

position:595202:1
position: 595202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595236:1
position: 595236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:595408-595436:1:exon

position:595408:1
position: 595408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595436:1
position: 595436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:595554-595608:1:exon

position:595554:1
position: 595554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595608:1
position: 595608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:595699-595756:1:exon

position:595699:1
position: 595699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595756:1
position: 595756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:595843-595958:1:exon

position:595843:1
position: 595843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1217000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1217000
old locus tag: PCHAS_121700
note: term=structural;date=20130213;qualifier=method_exon =changed coordinates of exon 1 based on homology and RNASeq;curatorName=ucb@sanger.ac.uk
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MTEDKLNLIKDYLKDLNMTSQNLCNINYYNSLPKFKKISDINDHPILNCLRTKYNERKKHTTNEKEQFKSIDYESYSTNIESESTASLDQTYDCISQLSEGEESENRAKKKEKIKFHTNSEKPPKKKIIFSFKKKNETKNRNPSYDKNVEMISDRNDDHFVGSLNRTEKPLILNQINTSKFCNKNSSISCANVDYNKRGEERKGNKMHILNDINHISNYDDNKYNKNTNKSPTYSQISESPHSSINSTRNSKKKKKKTILNENPSKSLKENNNIEDSNNMENKYIRPNKLEIEDIRMKGINIKKMASSQNATFSNDREKELFQYLIKEANKEIEKIIIKIEQKYKNEIAYKTNNIKKEYDEKIKALTKNETILLKNHNNIEKIKSLENTNYALLKEIEKLKKYNKEINDNNFQKYESINKNELNTKKLKDKIQTMNKQIEEYEKKINMLNDDVNTNYEKYFYFQNKCGNNEKVIQQNEEEMINLRKKLEISGKSKSGVELELRQLQDKNIKAERDNNNLREELNKAKTNVSTLKEQNNEEQRNNEYLISCYKMEEKKLKEDLENYKIKYAISENNQYSKTLEQKLKNMEITLKDMENEKSIYERTCLKYEKAEKNLKTEIKDLKNELYECKNKLHQVNKPTSPTIQTIMFNANQEYGFPQEKENEHNMDKVQEREEFKSDEILKEPDITEKINSIEKQLILLKLEKSTKESELIRCPKYGKRSGEIKKKACLEQKLSYINDKINILNKNLKLIKNKK
SIO_010081: PCHAS_1217000
subclass of: SO_0000673
so part of: PCHAS_1217000
location: join(592053..592062,592219..593609,593749..593790,593966..594055,594187..594272,594422..594503,594589..594653,594741..594803,594937..595088,595202..595236,595408..595436,595554..595608,595699..595756,595843..595958)
location: region:592053-595958:1
so has part: feature:592053-592062:1:exon
so has part: feature:592219-593609:1:exon
so has part: feature:593749-593790:1:exon
so has part: feature:593966-594055:1:exon
so has part: feature:594187-594272:1:exon
so has part: feature:594422-594503:1:exon
so has part: feature:594589-594653:1:exon
so has part: feature:594741-594803:1:exon
so has part: feature:594937-595088:1:exon
so has part: feature:595202-595236:1:exon
so has part: feature:595408-595436:1:exon
so has part: feature:595554-595608:1:exon
so has part: feature:595699-595756:1:exon
so has part: feature:595843-595958:1:exon

XP_016654234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:592053-592062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592219-593609:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:593749-593790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:593966-594055:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:594187-594272:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:594422-594503:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:594589-594653:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:594741-594803:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:594937-595088:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:595202-595236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:595408-595436:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:595554-595608:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:595699-595756:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:595843-595958:1:exon

PCHAS_1217100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1217100
old locus tag: PCHAS_121710
so part of: sequence
location: <596635..>598356
location: region:596635-598356:1
so has part: feature:596635-598356:1:exon
subclass of: SO_0000010

3497274
type: Gene
SIO_000068: ncbigene

position:596635:1
position: 596635
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:598356:1
position: 598356
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596635-598356:1:exon

PCHAS_1217100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1217100
old locus tag: PCHAS_121710
product: mRNA-capping enzyme subunit beta, putative
transcript id: XM_739067.2
SIO_010081: PCHAS_1217100
subclass of: SO_0000673
so part of: PCHAS_1217100
location: <596635..>598356
location: region:596635-598356:1
so has part: feature:596635-598356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:596635-598356:1:exon

PCHAS_1217100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1217100
old locus tag: PCHAS_121710
note: term=annotation;date=20160205;qualifier=removed_pro duct=RNA triphosphatase, putative;qualifier=added_product=mrna-capping enzyme subunit beta, putative;qualifier=added_literature=pmid:11248030;qualifie r=added_ec_number=3.1.3.33;qualifier=added_GO:0016887;cura torName=ucb@sanger.ac.uk; ;query 534-534;GPI_cleavage_site_score=1.1019999; pfam_scan;Pfam:PF02940.11; E()=2.1E-75;score=253.1;query 17-337;description=mRNA_triPase; iprscan;InterPro:IPR004206 : mRNA capping enzyme, beta subunit;Pfam:PF02940; score=2.2E-75;query 17-337;description=mRNA triphosphatase Cet1-like; iprscan;InterPro:IPR033469 : CYTH-like domain;Superfamily:SSF55154; score=6.21E-55;query 2-380;description=CYTH-like domain superfamily
codon start: 1
product: mRNA-capping enzyme subunit beta, putative
translation: MVREAHELLDGSRPIPIDKITYELSQNIILAFDNNEHIKRSKDVQIEIEARIGLVVDKNKHRLKLPIYTDAIVENNFSDFQSGVDKDSFQYLLNYLHNMTRRNNTQPCKSNNDTNLNDNNKEGSINLNSTNKNDISSIGDSTNNGIDELGKKKNNNNNFMNEKENSVYEFVALKAYKSVDKYYILKNENNSRIRVTTNMDESENEKNQSMTKSLHKENINTWNVYLGNNKDYFDDDDEEEDNEDDETTKNKYNKNMNKQNNSKNKDNNIDDCLDYRISINLEHTKSISKLFLSKITPVYERYKERTSFINKYMGIQFDLTKIKTKDNNEFYEIEIEIPTKSIFKAMSNLRNKNDSNYLHFICSNLINNARGICSQLNLFKKNNFMKTGLNNNDILPSLPASQVNYSHSQSEQKLFKKYMHSVLPIVGDYMFRVVSKNEQMLQKKINDSNISNHDKFNMLKNIIDIRRHNKKCTISVTQTYAENRWKVIKNENSQNVIVLVSDSSDHSDEEEHQNSQYEKIKQNRASSQNSPYNNSSDNNPHFNDQYNEGDDYDNDDETINNKKNKDPSFYDDT
SIO_010081: PCHAS_1217100
subclass of: SO_0000673
so part of: PCHAS_1217100
location: 596635..598356
location: region:596635-598356:1
so has part: feature:596635-598356:1:exon

XP_744160.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:596635-598356:1:exon

PCHAS_1217200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1217200
old locus tag: PCHAS_121720
so part of: sequence
location: <599643..>600155
location: region:599643-600155:1
so has part: feature:599643-600155:1:exon
subclass of: SO_0000010

3497275
type: Gene
SIO_000068: ncbigene

position:599643:1
position: 599643
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:600155:1
position: 600155
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599643-600155:1:exon

PCHAS_1217200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1217200
old locus tag: PCHAS_121720
product: peptidyl-prolyl cis-trans isomerase, putative
transcript id: XM_739068.2
SIO_010081: PCHAS_1217200
subclass of: SO_0000673
so part of: PCHAS_1217200
location: <599643..>600155
location: region:599643-600155:1
so has part: feature:599643-600155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:599643-600155:1:exon

PCHAS_1217200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1217200
old locus tag: PCHAS_121720
note: term=annotation;date=20110510;qualifier=added_gene_ name=CYP19A;curatorName=ucb@sanger.ac.uk; ;query 154-154;GPI_cleavage_site_score=0.9366999; pfam_scan;Pfam:PF00160.17; E()=8.1E-49;score=165.7;query 9-168;description=Pro_isomerase; iprscan;InterPro:IPR024936 : Cyclophilin-type peptidyl-prolyl cis-trans isomerase;PIRSF:PIRSF001467; score=1.4E-78;query 1-170;description=Cyclophilin-type peptidyl-prolyl cis-trans isomerase; iprscan;InterPro:IPR029000 : Cyclophilin-like domain;Superfamily:SSF50891; score=1.61E-73;query 3-170;description=Cyclophilin-like domain superfamily; iprscan;InterPro:IPR002130 : Peptidyl-prolyl cis-trans isomerase, cyclophilin-type;PRINTS:PR00153; score=5.0E-39;query 130-145;description=Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain; iprscan;InterPro:IPR002130 : Peptidyl-prolyl cis-trans isomerase, cyclophilin-type;PRINTS:PR00153; score=5.0E-39;query 24-39;description=Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain; iprscan;InterPro:IPR002130 : Peptidyl-prolyl cis-trans isomerase, cyclophilin-type;Prosite:PS50072; score=43.167;query 7-169;description=Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain; iprscan;InterPro:IPR002130 : Peptidyl-prolyl cis-trans isomerase, cyclophilin-type;PRINTS:PR00153; score=5.0E-39;query 117-129;description=Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain; iprscan;InterPro:IPR002130 : Peptidyl-prolyl cis-trans isomerase, cyclophilin-type;PRINTS:PR00153; score=5.0E-39;query 102-117;description=Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain; iprscan;InterPro:IPR002130 : Peptidyl-prolyl cis-trans isomerase, cyclophilin-type;PRINTS:PR00153; score=5.0E-39;query 59-71;description=Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain; iprscan;InterPro:IPR002130 : Peptidyl-prolyl cis-trans isomerase, cyclophilin-type;Pfam:PF00160; score=2.0E-48;query 10-168;description=Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain; iprscan;InterPro:IPR020892 : Cy…
codon start: 1
product: peptidyl-prolyl cis-trans isomerase, putative
translation: MSRAKVFFDISIDNKNAGRIVFELFNDITPRTCENFKSLCIGDKVGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGESIYGRSFTDENFKMKHDVPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVRDMEREGSNSGYVKRAVVITDCGEL
SIO_010081: PCHAS_1217200
subclass of: SO_0000673
so part of: PCHAS_1217200
location: 599643..600155
location: region:599643-600155:1
so has part: feature:599643-600155:1:exon

XP_744161.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:599643-600155:1:exon

PCHAS_1217300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1217300
old locus tag: PCHAS_121730
so part of: sequence
location: complement(<600861..>604930)
location: region:600861-604930:-1
so has part: feature:600861-604930:-1:exon
subclass of: SO_0000010

3494312
type: Gene
SIO_000068: ncbigene

position:600861:-1
position: 600861
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:604930:-1
position: 604930
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600861-604930:-1:exon

PCHAS_1217300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1217300
old locus tag: PCHAS_121730
product: cyclic amine resistance locus protein, putative
transcript id: XM_016798874.1
SIO_010081: PCHAS_1217300
subclass of: SO_0000673
so part of: PCHAS_1217300
location: complement(join(<600861..600956,601156..601228,601366..601422,601543..601661,601755..602066,602246..>604930))
location: region:600861-604930:-1
so has part: feature:602246-604930:-1:exon
so has part: feature:601755-602066:-1:exon
so has part: feature:601543-601661:-1:exon
so has part: feature:601366-601422:-1:exon
so has part: feature:601156-601228:-1:exon
so has part: feature:600861-600956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:602246-604930:-1:exon

position:602246:-1
position: 602246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:601755-602066:-1:exon

position:601755:-1
position: 601755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602066:-1
position: 602066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:601543-601661:-1:exon

position:601543:-1
position: 601543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601661:-1
position: 601661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:601366-601422:-1:exon

position:601366:-1
position: 601366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601422:-1
position: 601422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:601156-601228:-1:exon

position:601156:-1
position: 601156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601228:-1
position: 601228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:600861-600956:-1:exon

position:600956:-1
position: 600956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1217300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1217300
old locus tag: PCHAS_121730
note: term=annotation;date=20110524;qualifier=removed_pro duct=hypothetical protein, conserved in Apicomplexan species;qualifier=added_product=conserved plasmodium membrane protein, unknown function;curatorName=ucb@sanger.ac.uk; term=annotation;date=20111214;qualifier=added_literature=P MID:22096101;qualifier=added_gene_name=carl;qualifier=remo ved_product=conserved plasmodium membrane protein, unknown function;qualifier=added_product=cyclic amine resistance locus protein, putative;curatorName=ucb@sanger.ac.uk; term=annotation;date=20160708;qualifier=added_literature=P MID:27381290;qualifier=added_GO:0005801;curatorName=ucb@sa nger.ac.uk; ;query 407-412; ;query 875-880; ;query 946-957; ;query 1095-1113; ;query 384-406; ;query 413-430; ;query 852-874; ;query 881-903; ;query 923-945; ;query 958-975; ;query 1072-1094; ;query 1-383; ;query 431-851; ;query 904-922; ;query 976-1071; tmhmm; query 1-1114; pfam_scan;Pfam:PF05346.7; E()=2.7E-116;score=388.3;query 662-1097;description=DUF747; iprscan;InterPro:IPR008010 : Protein of unknown function DUF747, CMV receptor;Pfam:PF05346; score=1.2E-121;query 663-1097;description=Tapt1 family
codon start: 1
product: cyclic amine resistance locus protein, putative
translation: MNRISLYDFVLDEIKGGRYYEPYQSDNENSERDGNDEKEGMGNHLKHMSYSNIHQNTEENKHDFYKFLDDLFKTHTIPDNALEHMIYVPFCFEKIMSLSFLLCLDNILYDITFMPIQVIRSICILFYILLKNISSNFLNRFIDIKNFKFYKYATTCNFKYLKRYKARVIKNSNKFIDTEMIRTGKKNKNNDNNDIDNNDLIYDSSYNLKNSTFDKFYGDHDIDGFTYNKNVSNSEDIMMFGDKYFMENNLALMKEGKNCGDELNTTCSHSDNESDNSSIDGLDYKNVGSSDEYHSNYSSSFYASRVYYMDSEHSEKIYYKKSIRDALVKKKSLVNFKYTYSRSIGDGNSTEINGNGFGRKRRKKDKYKFYNINSFDQSVKKNKIYLLIYFLFKPIILIIKLLFNIFKYIVKYFFSFFFIIYMNIIHFFHIKKLYTFNDIKKDDKTKITTRSFEIKYLSSKQQTDNNGQNGENDDNDDCVKVYKANLNSSQEMNNLSSQIKSFDRDAQKTELEKDEKKGKGTNGPISYSNNTQSKSNVEKIKKKETGKITNESGKTVNFTNLRNVVNKYINKKSNKKYNLKKKKDENDVNCKDKNVIHEKNNENTRIDDEIRNEGFTMNEQNGDSYFYYTYNDQYSEKKKKNVKKVKHMKKKLLKDHIKFLNLSFPEYSGLIRTSLILICIYIFSFLDTSRIYHYIRAQPFMKLYVVLNMLEILERLLRSLGKDLIDNMIRTFIRIINLRSYIYIVRKHYNNMTNDDIHFSNTSLEGRRKKNYIINKNNILHEEGNIKKKNEKVKFSENSTKECRKISNLYLNYKRVNFKKNNEDPYFNKEKNVFAFLKNNDEMAANFKLPIFFPFLSILIKFILQYIFVLAYILTHAFAHLIRFLSLNIAINSSESTMFLILVMSNFTEIKSTVFKKFNKISLFTIVASDAVERFYLFIDAFLVLLKMSTAYRTQNSFLSITSWLIIILLLEVGVDWCKHSYLLKYNKLKSESLIRYFQTLLADVLISRTTNNNIYYMNTVSFEVPCKNIFSFPHIPTRRLGYMSMPVVTLIVCSLPRLNYLSNISLLSFALSIWICLFLFKIILSIMIVSYTISEKHQLKNLKKPYDDISAL
SIO_010081: PCHAS_1217300
subclass of: SO_0000673
so part of: PCHAS_1217300
location: complement(join(600861..600956,601156..601228,601366..601422,601543..601661,601755..602066,602246..604930))
location: region:600861-604930:-1
so has part: feature:602246-604930:-1:exon
so has part: feature:601755-602066:-1:exon
so has part: feature:601543-601661:-1:exon
so has part: feature:601366-601422:-1:exon
so has part: feature:601156-601228:-1:exon
so has part: feature:600861-600956:-1:exon

XP_016654235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:602246-604930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:601755-602066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:601543-601661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:601366-601422:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601156-601228:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600861-600956:-1:exon

PCHAS_1217400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1217400
old locus tag: PCHAS_121740
so part of: sequence
location: complement(<607739..>614818)
location: region:607739-614818:-1
so has part: feature:607739-614818:-1:exon
subclass of: SO_0000010

3495626
type: Gene
SIO_000068: ncbigene

position:607739:-1
position: 607739
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:614818:-1
position: 614818
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607739-614818:-1:exon

PCHAS_1217400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1217400
old locus tag: PCHAS_121740
product: WD repeat-containing protein, putative
transcript id: XM_016798875.1
SIO_010081: PCHAS_1217400
subclass of: SO_0000673
so part of: PCHAS_1217400
location: complement(<607739..>614818)
location: region:607739-614818:-1
so has part: feature:607739-614818:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:607739-614818:-1:exon

PCHAS_1217400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1217400
old locus tag: PCHAS_121740
note: term=annotation;date=20150629;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=wd repeat-containing protein, putative;qualifier=added_literature=pmid:26043001;curatorN ame=ucb@sanger.ac.uk; ;query 2331-2331;GPI_cleavage_site_score=0.684; iprscan;InterPro:IPR036322 : WD40-repeat-containing domain superfamily;Superfamily:SSF50978; score=3.57E-18;query 483-1176;description=WD40-repeat-containing domain superfamily; iprscan;InterPro:IPR017986 : WD40-repeat-containing domain;Prosite:PS50294; score=10.311;query 480-563;description=WD40-repeat-containing domain; iprscan;InterPro:IPR001680 : WD40 repeat;SMART:SM00320; score=1.0;query 470-512;description=WD40 repeat; iprscan;InterPro:IPR001680 : WD40 repeat;SMART:SM00320; score=6.8;query 815-854;description=WD40 repeat; iprscan;InterPro:IPR001680 : WD40 repeat;SMART:SM00320; score=0.022;query 515-554;description=WD40 repeat
codon start: 1
product: WD repeat-containing protein, putative
translation: MDVKKEDNNKESDSSLNYHKKQKWNNSDDRQTKYNNKKLNGHIENGIINKDDKTNQNNSSSDEIPPDELGNGSIFGGYDNNRGKMKKNKNIHHKDLSYVTDQISDNVSDTYKVLIDICLNEVRKKKYKNLDEESMNRSGMIKNSDHYKKNSYTAHANGNDMEDEFFLNFENFKSSSHKENYMSINKKHPLNNDYLFNNSGRFKKIRSEPPDISINNKIDNQVDNFVFENYEGNKENEFSSSRSGAYMGSPTKIDHNLAYHKNDLGNNTQGVNHNKELIDKKVNYSAGNHNFDEPYGNKDIYNQDNYNLEIRNSKKTVSDLNKETNIISVGSLIDEVEDVEDYDETMKDKTYKGYNQRNILDISPRSDIENDMFNIFKNVINMLTYKYPEHDIKRFFFNSQNRLKNEYENNKNMSIKLTSYECNKYNNIYSLVKQRLYYTKNDIKNRNDVLNCQYKYDIYNNHCVKNIQRNVTILSHFLPHTKNRNFITKIKFDQYSENILTSGIDGFIKIYHVNTGNLISCIRAHNYAITDFDIHRSNKYIISCDEKGIVKFTSVDKYKSKNLLTYRRTFSMKNVFFFYNDIESSIGRSAGSKYKTYALCSTNSYFFIIHFDDLNNDMQIIKWLDVMPLKNYKFSSNLHFSYSLNYNIAPYVYENLIISKNPIKELKNSYLIFINTKNNCLDDFKDTEFGPSSYNKSGKFNLSAPNTMGRLSNFSMNSMKRKKKLTFILLTTKVIYDSNEENDKMLSITPDNIVITKYVNKIDNNLNNNGNGDDVIEVSYKGEKKKNNNDEDIAYKKIHQNFEINILQNVKNNVGSVLFKKFEDFSDEIVMFAFSNTCSNFVTTHINGAIYFWNLREYLTNITKKEIRGKKKIPVCCFYTSLYVEFVLESSAINETNKAKNNKNENTNNDKNKNNNSNNNGTANKNKETENNNLFVISSTSCSSYCYSSSDMDNTLKNDSKNSKVKKKKNKTSTSNNPSTTNAASSNSIYISENNLVPNLGDSSTIMVGSTNARTGNNNKKGKNTTKDDATNSLGNEKSNTKPKLRAKKLHYKISNINFNVSDEYIIVADGITNKSNSTKEMINAVTMKTNISIFSLLDFEEIKYFDLKKCDSYISFIEPNPNYKDIVLFGCFRKYIYLLNLEKKKIIKKYSYDSELKNLRAQWNNNGYTFIVSHNYGYFSIFTLNNNYSYKLTLTEQITSSQICYLNENNNNNNERVDDFDNLNLLPEFFLFDSYYPNNEYGRNGNSSRYELRDYGSFIDITNNLESGFNIGSLIGTDSNNVIPLIQNNQTRNSRSGRCDPPNNRNRNNNNEENNYGIINDNSTPELIHPRSKNKKKNRRIIEDSSDSSKKSNNTIYTLYSDSNSGCSGKNSNNSLFSNKKSKKKKKISSNSNDDIKIIDKKRSRPNKSHIINLENVSADGNEVITVEDVYSEGGQENYKENGKRAKKNEIINIDNEMDSNNYMASFDNKRKKGKYLLKDNKKISNEDDDDAFLIEDNECIQINDNNIVYVNNSYESVLDDSKKFENNEKIKKLNTFFILKSDDIKTSKHKKEDNHSFSDCDSYFDQYSSISFLSDESDYYNYSNYLDNLKTNSSSNENSSSNSDSSSIEAYDTASSGQYIERGFEENTFEHTKWGSKNIMNRFKKKGKAYKKGNRKGDKKGENKSEYNKKVEIIDENEENRVILNNFNNPNVLVDKKFKIYDHELQPLLPQFTSFNCKNNYFEYLKTSNFDSIYVHLNYFNFLRKKLKNNNDFNYKILLLYGIVYDLLLMYGNYLPNFDKRLLNMFFLKVCQEKNTSFYKSCESSFLQKDETETGSYNKRSKECDKKIVSYKSDKTFSNNSTTVVCNKIEGKNTSTIGSELFSEPFNNSKGKMSSLFINEDMCNKKNKMEKNFIKKMNQYIETYLKKNNKYFNSEKDKKRFMNVIKISKIYKNLKNEDNIFYDFYNDDYIKHQNGVNLSIFYQFLKRLPCKDEEDVDSFIYYNKKNYSNKNIKILFKK…
SIO_010081: PCHAS_1217400
subclass of: SO_0000673
so part of: PCHAS_1217400
location: complement(607739..614818)
location: region:607739-614818:-1
so has part: feature:607739-614818:-1:exon

XP_016654236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:607739-614818:-1:exon

PCHAS_1217500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1217500
old locus tag: PCHAS_121750
so part of: sequence
location: <617959..>623735
location: region:617959-623735:1
so has part: feature:617959-623735:1:exon
subclass of: SO_0000010

3493816
type: Gene
SIO_000068: ncbigene

position:617959:1
position: 617959
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:623735:1
position: 623735
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617959-623735:1:exon

PCHAS_1217500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1217500
old locus tag: PCHAS_121750
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798876.1
SIO_010081: PCHAS_1217500
subclass of: SO_0000673
so part of: PCHAS_1217500
location: join(<617959..622533,622718..622924,623120..623208,623319..623418,623541..>623735)
location: region:617959-623735:1
so has part: feature:617959-622533:1:exon
so has part: feature:622718-622924:1:exon
so has part: feature:623120-623208:1:exon
so has part: feature:623319-623418:1:exon
so has part: feature:623541-623735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:617959-622533:1:exon

position:622533:1
position: 622533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622718-622924:1:exon

position:622718:1
position: 622718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622924:1
position: 622924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:623120-623208:1:exon

position:623120:1
position: 623120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623208:1
position: 623208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:623319-623418:1:exon

position:623319:1
position: 623319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623418:1
position: 623418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:623541-623735:1:exon

position:623541:1
position: 623541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1217500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1217500
old locus tag: PCHAS_121750
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MDLHKLLESKLSIEESQNINVKEDDIHLNTINEDGKITTKKGCVLKIKNNDNGKEDLPNSSYENINLKKKDNPLLYYNDQKYDGLNNELSKSESFNNIKIKKKCYEKNDDTINLDITSTIENMYHNINYDYIDKQVHNLLESGNSSDEQGEVIKNEKEQIKTKIEEDEIEGNDEIQGLRQMEGNLLFSSLSNDEFMRIEKNESIPFHSDEIDFICEDEMNNIILSHEQKIRTFTSLLNDHGKLDEDYANYFRGRNENSIESYNGNGNESFDSNIKTGKSCKEGGELDSEDDNEIKNILNILQNLRDYNFNDTNAIDNDDNYENMEEKDELNNTEHSYNCENEDNNNKKHDENIIHDKNIPFLGTDYIPNDIANNKNDTNSANDQTESEEEKDNIENLNIKKLKDKYKKYVFSLSDHDEYQRSDRSVQSQNGEGPIEEAYYNSDTNIKQKIKKQNESDKYQEGANSMNTDMDGSPISDSHNNFHKVKNRKKKKKKEKIDELQADSYDKGNIHNNLTNEQNLEYYNLPVKPNVLHTQGHEGWENKINATSEFIIDSRHSSVSFYNNEIGSCAEIKKERTNMYTKVGNTENSDNNNGNETKHETNNKREIEEINNDIVNATNSSKNENSEQMRKRKLIKDNINILRNDNKNLKIIDELNQNINNLNFEYLKSNEFNLDINYTNDTMQNIPTQKNYTISEQIEKVEITNNNLLDENLNFDYYLKTLHNLKSRIHQEISGNDSSSNSNSNSNSLSRKNITTNEVGNENKAIQHYDEISAKRECGNDNIRNEKFRNTEYKEITNTNYQKEQNKLSEMKIIKDKHQDEEKEGKEIVLKKKGKKKKKTKRKYALDNNEKDVSPNNTQIELVEKNIVLKNTVKDLQNQITNYKKMEKLLNKNKKKYKNKLSIINEYEKKIDCIIIDFNKLKDTCTNKERKISKLEEITKYMNEQFSISKIQFENKMNEYVIFLKKKDSEIYMLKELIKEKEKVISFNENILKQYKADIDDMLKQNIERVEHVKNKLKIQQNMISEKDLKISKLEEDMRVNESKINTMENKIKALQNQVELEVKEKNEFKKNYEKENKEKDTLSKKLDEVINEKNNLHYKIEELLKTEKNIIGDKAELLECKNELSIENEKIKFEINTMIIEKEKMEEKYNLANSEKEQINNEMEILKKTYENNVNELEKLKEKLKNVQNDYNQLKEEKDRIEKSYSIEIEEKNKIQNSLEATKNELTTRENQKELLQSNLNNLQKHLDETVTKNEDEIKGLKKQLSELEANLEEANNLYFKEKEVIEKLNKEKNKFIKEFDKLKSKNKKITSKMKETQISNEKTINDVIKEKNESLEKEKSKFTEKVQSLEQAFQESYNELHCQKKNIQNELEELKIINQDIKNNSKNLLNVNDALVKEMKTYNIEKEQFIKGLKNIREAYIKIKNENQQLKKNAFLFIQKDIEQNYVPINIHNTALNEKKTYISEIDILKSKVKKSENEISNLSKEKSELSEKLKKINQQNDDLNTNIKVKSKITEDIMRTVEKLKSDITNKEEEIKKKTLEIKKMEREYKTLLDDYKMEKKNLIAKYENELDEYMNKCEFAHSKYKKYEEEVKEMKSKLKMKDEILEYTHKEIENIKESFCKEYEHKIQAVIEEKDKEVHAIQKKFKDLNEENAENKNEIVKLGKMLEDANKKIKKRDMEMYILLDENKKQKEKAAKKMNKVNELLNNLQKEYTDNIP
SIO_010081: PCHAS_1217500
subclass of: SO_0000673
so part of: PCHAS_1217500
location: join(617959..622533,622718..622924,623120..623208,623319..623418,623541..623735)
location: region:617959-623735:1
so has part: feature:617959-622533:1:exon
so has part: feature:622718-622924:1:exon
so has part: feature:623120-623208:1:exon
so has part: feature:623319-623418:1:exon
so has part: feature:623541-623735:1:exon

XP_016654237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:617959-622533:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622718-622924:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623120-623208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:623319-623418:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:623541-623735:1:exon

PCHAS_1217600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1217600
old locus tag: PCHAS_121760
so part of: sequence
location: complement(<624284..>626615)
location: region:624284-626615:-1
so has part: feature:624284-626615:-1:exon
subclass of: SO_0000010

3493817
type: Gene
SIO_000068: ncbigene

position:624284:-1
position: 624284
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:626615:-1
position: 626615
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624284-626615:-1:exon

PCHAS_1217600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1217600
old locus tag: PCHAS_121760
product: ATP-dependent RNA helicase DDX42, putative
transcript id: XM_016798877.1
SIO_010081: PCHAS_1217600
subclass of: SO_0000673
so part of: PCHAS_1217600
location: complement(join(<624284..624636,624809..>626615))
location: region:624284-626615:-1
so has part: feature:624809-626615:-1:exon
so has part: feature:624284-624636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:624809-626615:-1:exon

position:624809:-1
position: 624809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:624284-624636:-1:exon

position:624636:-1
position: 624636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1217600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1217600
old locus tag: PCHAS_121760
note: term=annotation;date=20151201;qualifier=removed_pro duct=ATP-dependent RNA helicase, putative;qualifier=added_product=atp-dependent rna helicase ddx42, putative;qualifier=added_literature=pmid:26525978;qualifie r=added_gene_name=ddx42;curatorName=ucb@sanger.ac.uk; ;query 689-689;GPI_cleavage_site_score=2.4940002; pfam_scan;Pfam:PF00271.27; E()=2.4E-21;score=75.9;query 487-599;description=Helicase_C; pfam_scan;Pfam:PF00270.25; E()=3.8E-32;score=111.3;query 275-453;description=DEAD; iprscan;InterPro:IPR001650 : DNA/RNA helicase, C-terminal;Prosite:PS51194; score=19.571;query 474-639;description=Helicase, C-terminal; iprscan;InterPro:IPR001650 : DNA/RNA helicase, C-terminal;SMART:SM00490; score=1.4E-23;query 519-600;description=Helicase, C-terminal; iprscan;InterPro:IPR001650 : DNA/RNA helicase, C-terminal;Pfam:PF00271; score=1.1E-21;query 487-600;description=Helicase, C-terminal; iprscan;InterPro:IPR011545 : DNA/RNA helicase, DEAD/DEAH box type, N-terminal;Pfam:PF00270; score=9.4E-32;query 275-453;description=DEAD/DEAH box helicase domain; iprscan;InterPro:IPR014001 : DEAD-like helicase, N-terminal;SMART:SM00487; score=4.8E-36;query 269-480;description=Helicase superfamily 1/2, ATP-binding domain; iprscan;InterPro:IPR014001 : DEAD-like helicase, N-terminal;Prosite:PS51192; score=20.336;query 281-465;description=Helicase superfamily 1/2, ATP-binding domain; iprscan;InterPro:IPR027417 : P-loop containing nucleoside triphosphate hydrolase;Superfamily:SSF52540; score=1.76E-53;query 280-615;description=P-loop containing nucleoside triphosphate hydrolase
codon start: 1
product: ATP-dependent RNA helicase DDX42, putative
translation: MMNNDKDDDNFFEEDDNYENNKNEKANDDNGQDEVDPLDEFMLEINKVIEEEKLKKEREEDIFNNKEIGSESENAIDSYAKSSRKWEKGKNINDTDQKYQIDKKNNNSNDAKDDNSLDDNDVTADIYEFLEKKNEELMNEKNKEKEHGKSFSSTQNYFVSAGTKDPQMEIKDDDSDFNDFLNDGNDKNKNDEIIICNINYDEIELEEFKKDIFVTDENINNFTLEQSVEYKKKNNIKTIGFNVPKPIFSFLQLKNIIDKEVLENMYELSISILSPAQSIVIPTFLSGRDFIANSRTGSGKTLAYIISLIIHLMNYKKESRKDTQKGVKKKNADPHALILTPTREICVQISEEINKISMNKLSSTLLFNGINFKNAYDDIHKGVDIIIANVKTLINFVNKKYLSLTNIKYVILDEFDKLFSNQFINSVISILNNIRTDSIRAFFSSTFSDSIHELVKPYLSKKHILIQVDDNNVLIDKKFYIVEESYKYKYLLHSIHQFSNNGQGFIFCNSKKNVLALYERLKKEIQLKHIKFDFIYGDMDQTDRLYKLDSLKNKRTQILISTGLMERGINVIDLNFVINYDCPRDLFVYIHRIGRCSRMNNKGYAVTFITPSEKKMAYLIYTHLKNSKETIDEELKSFILRSNLHNDAEIKKLKRKMNTPHYDNPMKKVGPTNSNNTVVSLGSMPFQASSSQKQNEKPPPKQVHMISPNDVLSSSSDEY
SIO_010081: PCHAS_1217600
subclass of: SO_0000673
so part of: PCHAS_1217600
location: complement(join(624284..624636,624809..626615))
location: region:624284-626615:-1
so has part: feature:624809-626615:-1:exon
so has part: feature:624284-624636:-1:exon

XP_016654238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:624809-626615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:624284-624636:-1:exon

PCHAS_1217700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1217700
old locus tag: PCHAS_121770
so part of: sequence
location: <627883..>630486
location: region:627883-630486:1
so has part: feature:627883-630486:1:exon
subclass of: SO_0000010

3492271
type: Gene
SIO_000068: ncbigene

position:627883:1
position: 627883
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:630486:1
position: 630486
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627883-630486:1:exon

PCHAS_1217700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1217700
old locus tag: PCHAS_121770
product: peptidase, putative
transcript id: XM_016798878.1
SIO_010081: PCHAS_1217700
subclass of: SO_0000673
so part of: PCHAS_1217700
location: <627883..>630486
location: region:627883-630486:1
so has part: feature:627883-630486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:627883-630486:1:exon

PCHAS_1217700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1217700
old locus tag: PCHAS_121770
note: pfam_scan;Pfam:PF00326.17; E()=7.6E-21;score=74.4;query 658-848;description=Peptidase_S9; iprscan;InterPro:IPR029058 : Alpha/Beta hydrolase fold;Superfamily:SSF53474; score=1.38E-36;query 635-860;description=Alpha/Beta hydrolase fold; iprscan;InterPro:IPR001375 : Peptidase S9, prolyl oligopeptidase active site region;Pfam:PF00326; score=7.8E-21;query 658-848;description=Peptidase S9, prolyl oligopeptidase, catalytic domain
codon start: 1
product: peptidase, putative
translation: MNSNTNVLRKVPPFMNNLEDIYNTCYGGLNTIEKCQFGKPVSRRINGEKLDMYQLYIIHYQLCNKEQLYKISYVQENMNISNSFFDKEYKMYMSDDGEIGCLFNINDNKLMINLFKNEGNKGSFFFTSINSVSVKDVHKRFFMHESFCSFNSNNTLLLYTAESEDIKLKKDNTAYQKSDLDALKKLNTGVYTETFGDQWNCSFFYLYLYNLIDNTVKYITVKDITSCFYNPQFIDETSFICLSLRTLPYRLGMHGLNTKPNDLLLCTLNDPDLDIPIDGDSTDIKGSAAIGNSGRSKRNHVRCAYIKLSCKNFKHVNSPIIIKDKDQIYVACLVVFNKHDENKYISEYSLVMFKLEKDETKKNKNKKTNKDIPMEEEKSLIHYENADEIYYEDNNISGLKVEDSRTDNIHISNNNTNDKINDDACNYKKTETIILVKEGEHTPYFRGIYTDEIKGYCYPYIFLNTILYCNHIIIAVHMFSKKMYRVLINDIYNENDSGTSIELLCMKGNNLLISIRNMLLNDILMYCIFNEQNIKGDFIYLTNLKSYNIDFSTYSNIEKTSDFIYSSINDNSKNLFKILSELETSVFENKHPYIRRKKPSYNLLYQSEEEYLNDIKDKGVSLSNFNLFNKNNLRNLILYIHGGPYCTTFNEYKNIYIYFAACGFDVLGVNYIGSLTYTDNPTIINGVVNTIEINDMLAVLQSFCKHFGDYENIYLYGRSYGGFASCSLLTKSNIFKSGCVINGVYEWILTAFSTDVPDFCVNLTVNKNVEYDCVFDKHHYPMLYEMSPLNYVQNIKAPVLIVCSTNDKRVNYHNSIALYNRLRALKKKTKLFLFEGVNHSINNYYYDETILMNIILWFYDYDTKKKK
SIO_010081: PCHAS_1217700
subclass of: SO_0000673
so part of: PCHAS_1217700
location: 627883..630486
location: region:627883-630486:1
so has part: feature:627883-630486:1:exon

XP_016654239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:627883-630486:1:exon

PCHAS_1217800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1217800
old locus tag: PCHAS_121780
so part of: sequence
location: complement(<631012..>632412)
location: region:631012-632412:-1
so has part: feature:631012-632412:-1:exon
subclass of: SO_0000010

3490868
type: Gene
SIO_000068: ncbigene

position:631012:-1
position: 631012
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:632412:-1
position: 632412
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631012-632412:-1:exon

PCHAS_1217800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1217800
old locus tag: PCHAS_121780
product: protein kinase, putative
transcript id: XM_016798879.1
SIO_010081: PCHAS_1217800
subclass of: SO_0000673
so part of: PCHAS_1217800
location: complement(join(<631012..631081,631235..631283,631489..632024,632108..>632412))
location: region:631012-632412:-1
so has part: feature:632108-632412:-1:exon
so has part: feature:631489-632024:-1:exon
so has part: feature:631235-631283:-1:exon
so has part: feature:631012-631081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:632108-632412:-1:exon

position:632108:-1
position: 632108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:631489-632024:-1:exon

position:631489:-1
position: 631489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632024:-1
position: 632024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:631235-631283:-1:exon

position:631235:-1
position: 631235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631283:-1
position: 631283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:631012-631081:-1:exon

position:631081:-1
position: 631081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1217800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1217800
old locus tag: PCHAS_121780
note: term=structural;date=20110204;qualifier=method_exon =changed gene model, changed coordinates of exon 2, added exon 3 and 4 based on homology;curatorName=ucb@sanger.ac.uk; term=annotation;date=20171205;qualifier=added_literature=P MID:29197418;qualifier=added_GO:0005634;qualifier=added_GO :0034399;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF00069.21; E()=1.3E-19;score=70.4;query 39-279;description=Pkinase; iprscan;InterPro:IPR011009 : Protein kinase-like;Superfamily:SSF56112; score=3.07E-31;query 34-287;description=Protein kinase-like domain superfamily; iprscan;InterPro:IPR000719 : Protein kinase, core;Pfam:PF00069; score=3.3E-19;query 39-279;description=Protein kinase domain; iprscan;InterPro:IPR000719 : Protein kinase, core;Prosite:PS50011; score=21.333;query 1-279;description=Protein kinase domain; iprscan;InterPro:IPR000719 : Protein kinase, core;SMART:SM00220; score=1.5E-8;query 28-279;description=Protein kinase domain
codon start: 1
product: protein kinase, putative
translation: MGILYSSKEKYTKYFHRGYLINSDANVNDKIKEYPCVFLKSGEKRLVKKIDKNVFKGEILNSLLKLRTYTYKNDSSIPKYLLKTYNIYEDDEFSYVIFENCAGGFFFDILKDNNVINENILAEWFYQILVALNFLEKKNIYHGNLNGYCIYFKDKTRKEIRVSLLSVDSRYDNIDEKGDLYGLYFIRSPQEIKKLYHDKNNSWYVGMLLYFILHGSYPFINNNVLTNYYNIIQNDIPFVALKSEHSYYTNLMYDFLKSALEKDYDKRPSVEGLLNHPWIKKKGEHPIREILDEKTRKMGINQIKAIEQNMDAISEFNNI
SIO_010081: PCHAS_1217800
subclass of: SO_0000673
so part of: PCHAS_1217800
location: complement(join(631012..631081,631235..631283,631489..632024,632108..632412))
location: region:631012-632412:-1
so has part: feature:632108-632412:-1:exon
so has part: feature:631489-632024:-1:exon
so has part: feature:631235-631283:-1:exon
so has part: feature:631012-631081:-1:exon

XP_016654240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:632108-632412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631489-632024:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:631235-631283:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:631012-631081:-1:exon

PCHAS_1217900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1217900
old locus tag: PCHAS_121790
so part of: sequence
location: <634843..>636963
location: region:634843-636963:1
so has part: feature:634843-636963:1:exon
subclass of: SO_0000010

3496981
type: Gene
SIO_000068: ncbigene

position:634843:1
position: 634843
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:636963:1
position: 636963
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634843-636963:1:exon

PCHAS_1217900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1217900
old locus tag: PCHAS_121790
product: conserved Plasmodium protein, unknown function
transcript id: XM_738779.2
SIO_010081: PCHAS_1217900
subclass of: SO_0000673
so part of: PCHAS_1217900
location: <634843..>636963
location: region:634843-636963:1
so has part: feature:634843-636963:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634843-636963:1:exon

PCHAS_1217900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1217900
old locus tag: PCHAS_121790
note: query 675-675;GPI_cleavage_site_score=0.11019999; ;query 553-676; ;query 530-552; ;query 677-696; ;query 1-529; ;query 697-706; tmhmm; query 1-707
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MNTPSKCVNCIENYSSRLNITNRQFENEPENVTSKTKLIDISAKDSCTSYTPLINKTKFVNHKNNNEYNKDRHKIFSSLLKKIRNGKEKASVNIKNYYDKKKYTYIYEKNLGRNKKKFTLLNCENGDSININNDTNIGINDKTKINRNANFLKIFQHIKNESTDGEVAKLRGVKIDGNKQNKKIEDYLINLQTNQNRNPDMICNPHMKYLRNIKKLLHISDEEIKDVIEISKFEINLNINTFYCKFINENSDNALLKYNVNYNKNVYDIQEKRGHKNEKIISYKKKFPIGFLLHQYNISMQENLYYCYRIYEPDNFENDKNNMRGNIDHRKCHHFCAETNVYEENYDKYCSAMKYKESISNSDELLTNQYIDDNFDEIYYIQRINANNDTFSVFVKIYQIYIFSRVNNEINIDNKEDKNHDNNNNRNAQNRIKGYRNLEDSYEERINSCNSNKTKVSIYVFITILNDSLLKYIIKKKILYDVTNCINQWEIDIITEVQNLKNATSNISMSIKIKEWNDNIYCIIKNIENFINDYLIVFIRNIAINIIYFLGVYENNMLQNYISFLKTEDSNNLHTRQKYTFKSIYNDIKKKIQELKPKKKRSNEHRQKKRQNIPHNQNYKKGHNWFQNIFKKNDNKKKHTFFYDDACFFNNLTIDKKKCYFKSHHEANSYVAYINSIYYRRIMFLYILFFFVYIAITKSMSCSCYA
SIO_010081: PCHAS_1217900
subclass of: SO_0000673
so part of: PCHAS_1217900
location: 634843..636963
location: region:634843-636963:1
so has part: feature:634843-636963:1:exon

XP_743872.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:634843-636963:1:exon

PCHAS_1218000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1218000
old locus tag: PCHAS_121800
so part of: sequence
location: <637935..>640001
location: region:637935-640001:1
so has part: feature:637935-640001:1:exon
subclass of: SO_0000010

3490103
type: Gene
SIO_000068: ncbigene

position:637935:1
position: 637935
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:640001:1
position: 640001
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637935-640001:1:exon

PCHAS_1218000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1218000
old locus tag: PCHAS_121800
product: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative
transcript id: XM_016798880.1
SIO_010081: PCHAS_1218000
subclass of: SO_0000673
so part of: PCHAS_1218000
location: join(<637935..638172,638382..638512,638622..638672,638801..638861,638989..639153,639261..639328,639513..>640001)
location: region:637935-640001:1
so has part: feature:637935-638172:1:exon
so has part: feature:638382-638512:1:exon
so has part: feature:638622-638672:1:exon
so has part: feature:638801-638861:1:exon
so has part: feature:638989-639153:1:exon
so has part: feature:639261-639328:1:exon
so has part: feature:639513-640001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:637935-638172:1:exon

position:638172:1
position: 638172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:638382-638512:1:exon

position:638382:1
position: 638382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638512:1
position: 638512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:638622-638672:1:exon

position:638622:1
position: 638622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638672:1
position: 638672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:638801-638861:1:exon

position:638801:1
position: 638801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638861:1
position: 638861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:638989-639153:1:exon

position:638989:1
position: 638989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639153:1
position: 639153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:639261-639328:1:exon

position:639261:1
position: 639261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639328:1
position: 639328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:639513-640001:1:exon

position:639513:1
position: 639513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1218000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1218000
old locus tag: PCHAS_121800
note: term=annotation;date=20150708;qualifier=removed_pro duct=n-acetylglucosamine-1-phosphate transferase, putative;qualifier=added_product=udp-n-acetylglucosamine-- dolichyl-phosphate n-acetylglucosaminephosphotransferase, putative;qualifier=added_gene_name=alg7;qualifier=added_li terature=pmid:15665075;curatorName=ucb@sanger.ac.uk; ;query 44-49; ;query 118-123; ;query 186-191; ;query 247-258; ;query 306-311; ;query 369-374; ;query 26-43; ;query 50-69; ;query 98-117; ;query 124-143; ;query 163-185; ;query 192-214; ;query 224-246; ;query 259-281; ;query 286-305; ;query 312-331; ;query 351-368; ;query 375-397; ;query 1-25; ;query 70-97; ;query 144-162; ;query 215-223; ;query 282-285; ;query 332-350; ;query 398-400; tmhmm; query 1-401; pfam_scan;Pfam:PF00953.17; E()=3.2E-32;score=111.6;query 131-306;description=Glycos_transf_4; iprscan;InterPro:IPR000715 : Glycosyl transferase, family 4;Pfam:PF00953; score=2.7E-32;query 131-306;description=Glycosyl transferase, family 4
codon start: 1
product: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative
translation: MKSKFANDKIKADATHIYKESIPERYLFSFLIFYLLIVLYALKDTIYKNIIIFYIGPCVLLFKLSFICIPKFIQFLNQKGLCGIDLNKLSKDKVAEPIGLFPSILYFIFVLFYQILYYNDHKILLEYNAGLLSIIFMTFLGFIDDVLELKWRYKVILPFFASLPLLLCYSGETNIRIPNFLIFIFKKKIINIGFFYYIYIILLSVFCTNTINIYAGINGLEIGQTLIISIFISIHNLIEIILNIRSSDIFGLRILKQHFLSIIFTLPFISINLATFAFNFYPSKGFVGNTLTYFCGMFLAVVSIFGHYSKTLILFLVPQFLNFFLSLPQLFNFIPCPRHRLPIIDHKTNKLTHSYNFTLINLILYIFGPLSEYHLVIVLLFFQFATCSIGLFLRYFIDTT
SIO_010081: PCHAS_1218000
subclass of: SO_0000673
so part of: PCHAS_1218000
location: join(637935..638172,638382..638512,638622..638672,638801..638861,638989..639153,639261..639328,639513..640001)
location: region:637935-640001:1
so has part: feature:637935-638172:1:exon
so has part: feature:638382-638512:1:exon
so has part: feature:638622-638672:1:exon
so has part: feature:638801-638861:1:exon
so has part: feature:638989-639153:1:exon
so has part: feature:639261-639328:1:exon
so has part: feature:639513-640001:1:exon

XP_016654241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:637935-638172:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638382-638512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638622-638672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638801-638861:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638989-639153:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639261-639328:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639513-640001:1:exon

PCHAS_1218100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1218100
old locus tag: PCHAS_121810
so part of: sequence
location: <641421..>646205
location: region:641421-646205:1
so has part: feature:641421-646205:1:exon
subclass of: SO_0000010

3498728
type: Gene
SIO_000068: ncbigene

position:641421:1
position: 641421
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:646205:1
position: 646205
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641421-646205:1:exon

PCHAS_1218100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1218100
old locus tag: PCHAS_121810
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798881.1
SIO_010081: PCHAS_1218100
subclass of: SO_0000673
so part of: PCHAS_1218100
location: <641421..>646205
location: region:641421-646205:1
so has part: feature:641421-646205:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:641421-646205:1:exon

PCHAS_1218100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1218100
old locus tag: PCHAS_121810
note: iprscan;Superfamily:SSF52047; score=1.43E-13;query 1004-1510;description=null
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MIGGNDVRLKNDDNEKKNKTQFKSNETNSYYSIDQNTISDGESPNICYVNKSNPGNSHINNLINNIIKCNNKFTKYNRIILSLKKINERIKCSNKCILNSCSEQKKDTKKKRKKNLLQIKHRKYKKILFTNDCKIFTKKKKKCNPKYELTEIILKHKINKKIHQIIKRVIYIAYYTNIEHYKKRNIYNNSFIYFLWNPHTLKQRNQEIKKRKKTNKLINSTNFTIINELKYNKGKQKYLNVERLNMVTDSKKANQYNNKGGKNDKILSANKKETKLMGNCETEEEDEQKCSETNYICNGLQKKSESTYDMYKGLHKNATFNGYTYGFKNSENELAKRSIKNKDSKNFHKYNSEDNASKIYMNEKRSNFCCNDNESNNLKNYLYKDNELKARNHTFSCLYEFWNNKCANNNIYFDKKLYFSKYNNTNNTDKLIDSKDIRNDSHSLRSVSKRDEHKEKKTNKLKNCILKKINTDNNNQFFLHKIDVLSDIHIHDKNNHSNYNHNGKKNCDQYYGENWKNIKFNYFPICPSIETDQINGYKHQYTKDSYIIKRTYSIDRKYNVRDYFRMSYIHKNYSSYKNRRNSTNYFAQNINCCNIESEQTDRYFFSKKLIPDFLNINKHNNNKKEIKCKNNVEKNVAFYYNSHYSDKHNVNFLSYQNNNNYNEKSRNSMEDIRYNTNNSSSNATINEINHNNSASTRASNTNSSNSYTNIHASVQPFKRLKNRVNNHFSALKRSYKNYQKNFEEEKIIFFNSIRNIIRIIKEIKKLKADLKKEKKYCSVICDEKKKEEFNNLIKYLLHQKIIRKKLKEYYFKKIDKGLFTFLLRSNYANFLFSEEEVKLLKRWNMIKKERSKFDNNENHEENKAYGKNNKFQSNNNLGYDYTDTLNITCPDQTNICLGFEKEGETCYQEVSKNEEVLQNNILNYEGRKSYQNNYNRRSQFYGNNNEVRLYAANEFSHNIIEEYYKGNYLKGIYIDNLNDLYLKYCKKSKRGIIFNVLSFFKNIKIKNVSKKFKKKLKNNQHIYLSKIYNDKKMLRHIKYIFIKLLKKNITDINSIHINNCFLNSTTCFFLFLILTIFKNISTIKIVQCHIYYSHFYISLYYIKNNNLKNLYFMYNHIIHCESPDKDIYDYKYYKKCIIYFDLNYLKKKSKNNNRQRDKKHVEDITGSEYIPYSFEQLENCQIGKTENDHKSNTTSHYGINKIVIKKNKKVIPLDNILFYDIFIAKKKKLNKGTAINERMTIKLCKLPNKEHKNSIISSNIEGNPQEQFGWYDSISTAPPLPNTGEEDQNNEEHITNDIHTEIEKSENRYICDDTKFSSNINTYNIHSSSCSNEISSENSAQDSENYIYTFPRKIIEYFNLEKLKVLRLSSNKLDDDALTHLSTLIKKNKLNKLKILDLRWNNFTYKSLLSLLFALINSVKNGYKNSTISDLKTNKQTNRLKLRKLLLSGNNIDSSLYSSFLSGFCTCNYIVVAELDFSMNIIDNECFPITLKYFKHILNLQKRKKNNNNISGVYINLDHNSLKNSTYINKLMKILFKFPRNKKKYIKNKNMEQTNFIDQTAMAEQNILLSLQYNDIKNIDKNVAFHKYEQRIRF
SIO_010081: PCHAS_1218100
subclass of: SO_0000673
so part of: PCHAS_1218100
location: 641421..646205
location: region:641421-646205:1
so has part: feature:641421-646205:1:exon

XP_016654242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:641421-646205:1:exon

PCHAS_1218200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1218200
old locus tag: PCHAS_121820
so part of: sequence
location: complement(<646530..>648058)
location: region:646530-648058:-1
so has part: feature:646530-648058:-1:exon
subclass of: SO_0000010

3491881
type: Gene
SIO_000068: ncbigene

position:646530:-1
position: 646530
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:648058:-1
position: 648058
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646530-648058:-1:exon

PCHAS_1218200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1218200
old locus tag: PCHAS_121820
product: conserved protein, unknown function
transcript id: XM_733742.2
SIO_010081: PCHAS_1218200
subclass of: SO_0000673
so part of: PCHAS_1218200
location: complement(join(<646530..646742,646880..>648058))
location: region:646530-648058:-1
so has part: feature:646880-648058:-1:exon
so has part: feature:646530-646742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:646880-648058:-1:exon

position:646880:-1
position: 646880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:646530-646742:-1:exon

position:646742:-1
position: 646742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1218200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1218200
old locus tag: PCHAS_121820
note: term=annotation;date=20180511;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk; ;query 1-6; ;query 7-29; ;query 30-463; tmhmm; query 1-464
codon start: 1
product: conserved protein, unknown function
translation: MFIRASTIFTYIYYILLFYKYCMHSYGLHFKKTNIREMFLPNIKLTNKSNLMKVRRKNVINYKNPEKRKEKWIDEINKVNKFSLFKNCKKKENEQTHNDVEDICSEMKENSIMSIPGKMKKNNISNELKKETKNERIKGDRNNVTGMRSDESHMDYKSGEILDTHIYDKEKKDDENVDNNAEIGNESLNNLTEEDPKNNEVIRKEENAEISTSNDLELKIAKEIELGIKKKKKKTMSEEIRKKLSELAKLRWRNEEERKKLLRCKNKFKHSEKTKQILSYKIKLKWKDENYRKNVMQKTLIFNQDENTKRRKSLILKEKWKVKEFREKMLCNRKPFSVERRKKISDIIKQKWREEGYKKKTLDAIRENYKKRKLNVGLNPNLNYIQNLIMFKQLGISPPKMRQFPEVHKEKLRGKKKKKTKKAKKSYKENWKNIYDNILDKNEFRNPIPYLGSIDHLSVSTNI
SIO_010081: PCHAS_1218200
subclass of: SO_0000673
so part of: PCHAS_1218200
location: complement(join(646530..646742,646880..648058))
location: region:646530-648058:-1
so has part: feature:646880-648058:-1:exon
so has part: feature:646530-646742:-1:exon

XP_738835.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:646880-648058:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646530-646742:-1:exon

PCHAS_1218300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1218300
old locus tag: PCHAS_121830
so part of: sequence
location: complement(<649574..>650484)
location: region:649574-650484:-1
so has part: feature:649574-650484:-1:exon
subclass of: SO_0000010

3492556
type: Gene
SIO_000068: ncbigene

position:649574:-1
position: 649574
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:650484:-1
position: 650484
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649574-650484:-1:exon

PCHAS_1218300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1218300
old locus tag: PCHAS_121830
product: histone H2A.Z, putative
transcript id: XM_016798882.1
SIO_010081: PCHAS_1218300
subclass of: SO_0000673
so part of: PCHAS_1218300
location: complement(join(<649574..649704,649825..650076,650391..>650484))
location: region:649574-650484:-1
so has part: feature:650391-650484:-1:exon
so has part: feature:649825-650076:-1:exon
so has part: feature:649574-649704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:650391-650484:-1:exon

position:650391:-1
position: 650391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:649825-650076:-1:exon

position:649825:-1
position: 649825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650076:-1
position: 650076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:649574-649704:-1:exon

position:649704:-1
position: 649704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1218300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1218300
old locus tag: PCHAS_121830
note: query 130-130;GPI_cleavage_site_score=0.408; pfam_scan;Pfam:PF16211.1; E()=1.6E-11;score=43.6;query 118-149;description=Histone_H2A_C; pfam_scan;Pfam:PF00125.20; E()=1.7E-17;score=63.9;query 34-117;description=Histone; iprscan;InterPro:IPR009072 : Histone-fold;Superfamily:SSF47113; score=9.26E-42;query 15-125;description=Histone-fold; iprscan;InterPro:IPR032454 : Histone H2A, C-terminal domain;Pfam:PF16211; score=1.7E-11;query 118-149;description=Histone H2A, C-terminal domain; iprscan;InterPro:IPR007125 : Histone core;Pfam:PF00125; score=8.9E-18;query 33-117;description=Histone H2A/H2B/H3; iprscan;InterPro:IPR032458 : Histone H2A conserved site;Prosite:PS00046; score=1.0;query 47-53;description=Histone H2A conserved site; iprscan;InterPro:IPR002119 : Histone H2A;PRINTS:PR00620; score=2.2E-41;query 84-97;description=Histone H2A; iprscan;InterPro:IPR002119 : Histone H2A;SMART:SM00414; score=1.6E-63;query 29-148;description=Histone H2A; iprscan;InterPro:IPR002119 : Histone H2A;PRINTS:PR00620; score=2.2E-41;query 125-143;description=Histone H2A; iprscan;InterPro:IPR002119 : Histone H2A;PRINTS:PR00620; score=2.2E-41;query 69-84;description=Histone H2A; iprscan;InterPro:IPR002119 : Histone H2A;PRINTS:PR00620; score=2.2E-41;query 98-112;description=Histone H2A; iprscan;InterPro:IPR002119 : Histone H2A;PRINTS:PR00620; score=2.2E-41;query 39-61;description=Histone H2A
codon start: 1
product: histone H2A.Z, putative
translation: MEVPGKIIGGKVGGKVGGKVLGLGKGGKGKTGSGKTKKAPLSRASRAGLQFPVGRVHRMLKTRISSDGRVGSTAAVYAAAILEYLTAEVLELAGNATKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKALMNKVPVPPTQTKKPKKN
SIO_010081: PCHAS_1218300
subclass of: SO_0000673
so part of: PCHAS_1218300
location: complement(join(649574..649704,649825..650076,650391..650484))
location: region:649574-650484:-1
so has part: feature:650391-650484:-1:exon
so has part: feature:649825-650076:-1:exon
so has part: feature:649574-649704:-1:exon

XP_016654243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:650391-650484:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:649825-650076:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649574-649704:-1:exon

PCHAS_1218400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1218400
old locus tag: PCHAS_121840
so part of: sequence
location: complement(<652871..>654383)
location: region:652871-654383:-1
so has part: feature:652871-654383:-1:exon
subclass of: SO_0000010

3495600
type: Gene
SIO_000068: ncbigene

position:652871:-1
position: 652871
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:654383:-1
position: 654383
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652871-654383:-1:exon

PCHAS_1218400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1218400
old locus tag: PCHAS_121840
product: ATP-dependent RNA helicase DDX6, putative
transcript id: XM_737416.2
SIO_010081: PCHAS_1218400
subclass of: SO_0000673
so part of: PCHAS_1218400
location: complement(join(<652871..653781,653993..>654383))
location: region:652871-654383:-1
so has part: feature:653993-654383:-1:exon
so has part: feature:652871-653781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:653993-654383:-1:exon

position:653993:-1
position: 653993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:652871-653781:-1:exon

position:653781:-1
position: 653781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1218400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1218400
old locus tag: PCHAS_121840
note: term=annotation;date=20130419;qualifier=removed_pro duct=ATP-dependent RNA helicase;qualifier=added_product=atp-dependent rna helicase ddx6, putative;qualifier=added_literature=pmid:23562722;qualifie r=added_gene_synonym=ddx6;qualifier=added_ec_number=3.6.4. 13;curatorName=ucb@sanger.ac.uk; term=annotation;date=20150928;qualifier=added_GO:0005737;q ualifier=added_GO:0000932;qualifier=added_GO:0043186;curat orName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF00271.27; E()=6.0E-29;score=100.3;query 285-392;description=Helicase_C; pfam_scan;Pfam:PF00270.25; E()=4.8E-42;score=143.5;query 85-249;description=DEAD; iprscan;InterPro:IPR001650 : DNA/RNA helicase, C-terminal;Prosite:PS51194; score=23.515;query 271-431;description=Helicase, C-terminal; iprscan;InterPro:IPR001650 : DNA/RNA helicase, C-terminal;SMART:SM00490; score=4.8E-32;query 311-392;description=Helicase, C-terminal; iprscan;InterPro:IPR001650 : DNA/RNA helicase, C-terminal;Pfam:PF00271; score=4.8E-29;query 286-392;description=Helicase, C-terminal; iprscan;InterPro:IPR014014 : RNA helicase, DEAD-box type, Q motif;Prosite:PS51195; score=9.849;query 60-88;description=RNA helicase, DEAD-box type, Q motif; iprscan;InterPro:IPR011545 : DNA/RNA helicase, DEAD/DEAH box type, N-terminal;Pfam:PF00270; score=7.8E-42;query 85-249;description=DEAD/DEAH box helicase domain; iprscan;InterPro:IPR014001 : DEAD-like helicase, N-terminal;SMART:SM00487; score=5.2E-54;query 79-275;description=Helicase superfamily 1/2, ATP-binding domain; iprscan;InterPro:IPR014001 : DEAD-like helicase, N-terminal;Prosite:PS51192; score=26.85;query 91-261;description=Helicase superfamily 1/2, ATP-binding domain; iprscan;InterPro:IPR027417 : P-loop containing nucleoside triphosphate hydrolase;Superfamily:SSF52540; score=5.61E-67;query 130-412;description=P-loop containing nucleoside triphosphate hydrolase; iprscan;InterPro:IPR000629 : RNA helicase, ATP-dependent, DEAD-box type;Prosite:PS00039; score=1.0;query 207-215;description=ATP-dependent RNA helicase D…
codon start: 1
product: ATP-dependent RNA helicase DDX6, putative
translation: MSYKTNCVASNANTNALNNSNNLNKIEDNVIFDEAWKKKILEPLKDPRYKTEDVTKTKGNEFEDYFLKRELLMGIFEKGYEKPSPIQEESIPVALAGKNILARAKNGTGKTAAFAIPLLEKCNTHKNFIQGLILVPTRELALQTSAMIKELGKHMKIQCMVTTGGTSLREDIMRLYNAVHILCGTPGRILDLANKDVANLSGCHIMVMDEADKLLSPEFQPIVEELMKFLPKEKQILMYSATFPVTVKEFRQIYLSDAHEINLMDELTLKGITQYYAFVKERQKVHCLNTLFAKLQINQAIIFCNSITRVELLAKKITELGYSSFYIHARMSQTHRNRVFHDFRNGACRCLVSSDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRYGHLGLAINLITYEDRFNLYKIELELGTEIQPIPNEIDPSIYT
SIO_010081: PCHAS_1218400
subclass of: SO_0000673
so part of: PCHAS_1218400
location: complement(join(652871..653781,653993..654383))
location: region:652871-654383:-1
so has part: feature:653993-654383:-1:exon
so has part: feature:652871-653781:-1:exon

XP_742509.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:653993-654383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652871-653781:-1:exon

PCHAS_1218500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1218500
old locus tag: PCHAS_121850
so part of: sequence
location: complement(<658136..>659651)
location: region:658136-659651:-1
so has part: feature:658136-659651:-1:exon
subclass of: SO_0000010

27794964
type: Gene
SIO_000068: ncbigene

position:658136:-1
position: 658136
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:659651:-1
position: 659651
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658136-659651:-1:exon

PCHAS_1218500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1218500
old locus tag: PCHAS_121850
product: signal peptidase complex subunit 2, putative
transcript id: XM_016798883.1
SIO_010081: PCHAS_1218500
subclass of: SO_0000673
so part of: PCHAS_1218500
location: complement(join(<658136..658223,658373..658439,658555..658612,658730..658816,658902..658963,659165..659246,659364..659428,659606..>659651))
location: region:658136-659651:-1
so has part: feature:659606-659651:-1:exon
so has part: feature:659364-659428:-1:exon
so has part: feature:659165-659246:-1:exon
so has part: feature:658902-658963:-1:exon
so has part: feature:658730-658816:-1:exon
so has part: feature:658555-658612:-1:exon
so has part: feature:658373-658439:-1:exon
so has part: feature:658136-658223:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:659606-659651:-1:exon

position:659606:-1
position: 659606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:659364-659428:-1:exon

position:659364:-1
position: 659364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659428:-1
position: 659428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:659165-659246:-1:exon

position:659165:-1
position: 659165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659246:-1
position: 659246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:658902-658963:-1:exon

position:658902:-1
position: 658902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658963:-1
position: 658963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:658730-658816:-1:exon

position:658730:-1
position: 658730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658816:-1
position: 658816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:658555-658612:-1:exon

position:658555:-1
position: 658555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658612:-1
position: 658612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:658373-658439:-1:exon

position:658373:-1
position: 658373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658439:-1
position: 658439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:658136-658223:-1:exon

position:658223:-1
position: 658223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1218500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1218500
old locus tag: PCHAS_121850
note: term=annotation;date=20111101;qualifier=added_gene_ name=SPC2;qualifier=added_gene_synonym=spc25;qualifier=rem oved_product=smn-like protein;qualifier=added_product=signal peptidase complex subunit 2, putative;qualifier=added_literature=pmid:18054093;curatorN ame=ucb@sanger.ac.uk; term=annotation;date=20180829;qualifier=removed_product=si gnal peptidase complex subunit SPC2, putative;qualifier=added_product=signal peptidase complex subunit 2, putative;qualifier=added_literature=pmid:30127496;qualifie r=added_GO:0005783;qualifier=added_GO:0045047;qualifier=ad ded_GO:0005787;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF06703.7; E()=3.0E-9;score=36.7;query 26-171;description=SPC25; iprscan;InterPro:IPR009582 : Microsomal signal peptidase 25 kDa subunit;Pfam:PF06703; score=4.0E-9;query 26-171;description=Signal peptidase complex subunit 2
codon start: 1
product: signal peptidase complex subunit 2, putative
translation: MFSKKVRIENKEDDAYIVKNLYSENEIKKVAQDYLRVEIKNLHIYENVRYSNVRILLSLILIIIGGYCCVFVNHKKEPILMMDFLGAFFSVSILLYLWEYFYFEDYFMIIKTNNNKTLKLFLKLDIKTNTLSLNYKLNKVVYSTPFELMKLYNERGYLMKDYARHILKQFISNHGKNFKLTDKK
SIO_010081: PCHAS_1218500
subclass of: SO_0000673
so part of: PCHAS_1218500
location: complement(join(658136..658223,658373..658439,658555..658612,658730..658816,658902..658963,659165..659246,659364..659428,659606..659651))
location: region:658136-659651:-1
so has part: feature:659606-659651:-1:exon
so has part: feature:659364-659428:-1:exon
so has part: feature:659165-659246:-1:exon
so has part: feature:658902-658963:-1:exon
so has part: feature:658730-658816:-1:exon
so has part: feature:658555-658612:-1:exon
so has part: feature:658373-658439:-1:exon
so has part: feature:658136-658223:-1:exon

XP_016654244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:659606-659651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:659364-659428:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:659165-659246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:658902-658963:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:658730-658816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658555-658612:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658373-658439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658136-658223:-1:exon

PCHAS_1218600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1218600
old locus tag: PCHAS_121860
so part of: sequence
location: <660477..>661647
location: region:660477-661647:1
so has part: feature:660477-661647:1:exon
subclass of: SO_0000010

27794965
type: Gene
SIO_000068: ncbigene

position:660477:1
position: 660477
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:661647:1
position: 661647
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660477-661647:1:exon

PCHAS_1218600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1218600
old locus tag: PCHAS_121860
product: conserved protein, unknown function
transcript id: XM_016798884.1
SIO_010081: PCHAS_1218600
subclass of: SO_0000673
so part of: PCHAS_1218600
location: join(<660477..660548,660732..660844,661005..661038,661204..661272,661537..>661647)
location: region:660477-661647:1
so has part: feature:660477-660548:1:exon
so has part: feature:660732-660844:1:exon
so has part: feature:661005-661038:1:exon
so has part: feature:661204-661272:1:exon
so has part: feature:661537-661647:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:660477-660548:1:exon

position:660548:1
position: 660548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660732-660844:1:exon

position:660732:1
position: 660732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660844:1
position: 660844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:661005-661038:1:exon

position:661005:1
position: 661005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661038:1
position: 661038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:661204-661272:1:exon

position:661204:1
position: 661204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661272:1
position: 661272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:661537-661647:1:exon

position:661537:1
position: 661537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1218600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1218600
old locus tag: PCHAS_121860
note: term=annotation;date=20180511;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk
codon start: 1
product: conserved protein, unknown function
translation: MNVDIAFDGNEYTYSGYSKNSLIEDKNYTLDYDKYVHFAFFVCYYISHIKKEKCSDTELLTWYLKTFKHIVINSTKKVKRTYFNLINNLIQDKCVKVTLENNKRYLTHNDHFILWAWKRKALIYDKEQLDKY
SIO_010081: PCHAS_1218600
subclass of: SO_0000673
so part of: PCHAS_1218600
location: join(660477..660548,660732..660844,661005..661038,661204..661272,661537..661647)
location: region:660477-661647:1
so has part: feature:660477-660548:1:exon
so has part: feature:660732-660844:1:exon
so has part: feature:661005-661038:1:exon
so has part: feature:661204-661272:1:exon
so has part: feature:661537-661647:1:exon

XP_016654245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:660477-660548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660732-660844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:661005-661038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:661204-661272:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661537-661647:1:exon

PCHAS_1218700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1218700
old locus tag: PCHAS_121870
so part of: sequence
location: complement(<662276..>663694)
location: region:662276-663694:-1
so has part: feature:662276-663694:-1:exon
subclass of: SO_0000010

3486251
type: Gene
SIO_000068: ncbigene

position:662276:-1
position: 662276
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:663694:-1
position: 663694
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662276-663694:-1:exon

PCHAS_1218700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1218700
old locus tag: PCHAS_121870
product: nicotinamidase, putative
transcript id: XM_728204.2
SIO_010081: PCHAS_1218700
subclass of: SO_0000673
so part of: PCHAS_1218700
location: complement(<662276..>663694)
location: region:662276-663694:-1
so has part: feature:662276-663694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662276-663694:-1:exon

PCHAS_1218700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1218700
old locus tag: PCHAS_121870
note: term=annotation;date=20130321;qualifier=removed_pro duct=pyrazinamidase/nicotinamidase, putative;qualifier=added_product=nicotinamidase, putative;qualifier=added_ec_number=3.5.1.19;curatorName=uc b@sanger.ac.uk; pfam_scan;Pfam:PF00857.16; E()=6.2E-18;score=65.4;query 310-455;description=Isochorismatase; iprscan;InterPro:IPR000868 : Isochorismatase hydrolase;Pfam:PF00857; score=5.8E-18;query 309-454;description=Isochorismatase-like; iprscan;InterPro:IPR036380 : Isochorismatase-like superfamily;Superfamily:SSF52499; score=4.71E-22;query 342-450;description=Isochorismatase-like superfamily
codon start: 1
product: nicotinamidase, putative
translation: MKCLVIVDAQNDFLPKGAFNSKDEYMDVLYKINRIRLRLYNCTENDLIKLEDCKSVMEQNKNKLINENIVKYYKCNNDIDDENCKDQILVFPFEKNNHNKINNYELLNGKINGQIWVHNSKVAHNDKEINVNGNCNNLPHLNNYEKTKPQLNNYINNYCNMDENNNCIKTDSSKNAHMTSLNGHISNKSYFAMSILTVDYHPQLHISFAATHRLIYKEISQNSLKIKNYLKINGCLNDNSYNSLPINNTEVSKELNRINIETNEIKNDDIFYYENKCENQEENLIDANTQSEYYEYSSCLKNHKINTLTDVLKNIEKIKTPKCIYKDVNSINDIKEYTRINFLNETIDLWPVHCVRNTPGSKIHKNLIRNINDIIIKKAYTENFDSYTIFENDTVNNDILKILIEQNIKSVYICGFIFEYCVKDTALSFFRQGYETYIIEDATASLYGKDEDKQLLKNIGIKFVNSETMFLT
SIO_010081: PCHAS_1218700
subclass of: SO_0000673
so part of: PCHAS_1218700
location: complement(662276..663694)
location: region:662276-663694:-1
so has part: feature:662276-663694:-1:exon

XP_733297.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:662276-663694:-1:exon

PCHAS_1218800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1218800
old locus tag: PCHAS_121880
so part of: sequence
location: <667806..>677636
location: region:667806-677636:1
so has part: feature:667806-677636:1:exon
subclass of: SO_0000010

3496426
type: Gene
SIO_000068: ncbigene

position:667806:1
position: 667806
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:677636:1
position: 677636
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667806-677636:1:exon

PCHAS_1218800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1218800
old locus tag: PCHAS_121880
product: oocyst capsule protein Cap380, putative
transcript id: XM_738231.2
SIO_010081: PCHAS_1218800
subclass of: SO_0000673
so part of: PCHAS_1218800
location: <667806..>677636
location: region:667806-677636:1
so has part: feature:667806-677636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:667806-677636:1:exon

PCHAS_1218800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1218800
old locus tag: PCHAS_121880
note: term=annotation;date=20161218;qualifier=removed_pro duct=oocyst capsule protein;qualifier=added_product=oocyst capsule protein cap380, putative;curatorName=ucb@sanger.ac.uk; ;query 1-1; ;query 2-24; ;query 25-3276; ;query 3242-3242;GPI_cleavage_site_score=0.49879998; tmhmm; query 1-3277
codon start: 1
product: oocyst capsule protein Cap380, putative
translation: MYVINVIYVLIVCLFGIVLSSPHWADPLLNDFGNEDLSTNKKKRLHSTKAKRYALDISSFGNTCVAKYSDICGHSNYEIRVNNGISGYTIKAMLIQKETSDIVSVHHAVSSFSTDGSALLKFDDIPSLHYNIILEVTDLIYNKDYTIGNKCLCNVCNDTKIEINLSNLENNIIHATRGHKQIKLPFPQSSFVNGKLLFSNFSLYHSQINLKSIENYEEIYKNQYELVRPCSGIIMVHSEKYKIHYDIKSVHCYHVYIIDKIMKKITSNDQRSINFKNNMFLMFDENKTNEDDMISVVKNYSIQLPLKYDNGFYYPQSTVNGLLVTINVNVLLNNIKNIYINNIDKKMEYIQIFRIIIRLMHQYNEITYDNLLQYTTNLTLEKSKSPSSLINTNIYNVYAEELTVLLNSLSLEFNPDIIGLDKNVVLMEEKEFISQHGVDTNARIYKNQLILKESSDVCLVLLQDIAREISSYVNNKLDHKYTGVCKNLRKKNSYANMSVMHYTYEIDCNISIFYKEYNTNEGLMITNVISNKSLFEDVYIQLHYYDIYEYGILVHIQVDQNLVRYMKSLAKNYINNDSVIVMNIIGRKTDKLPEDIDQTLKIITFPIDCITNCSNAESIIIHDNYDYISIENICIKNTNGSEICFPKYNYSYIFDTRLLLVHMININPYPEITLHAIIHQRIVEGNYCILSRHPLLISHEYTPRIYKDNVCKEYINRCELLSTNVVVKSINIPSSILQLKNKFKLSFTTDFDEKHEEMFQVNYLADNDIVNISQKKHLLTHYNNSFYINQHDNLINESKRQKEDFNPIVSIDESSHNYIKGNGELYNEENAYKNIDNIQEMKYDINIFNMERMYTHEQTSKNNDSSLYPFGGLSINYSHVKKNIYMKFLNDYIYFYESDSQKSDYNTVSALSEDKFSHFTNVSVYNYECLGAYAYLMNKFNILVNDSLNCEAIHMIIEVLLKGKLGKYFIYNKNKIFLNFIKKEQYSDDIYDVFDLIDVEIYEQDNLHTPKSKHRLNVSIDENNLNLLYSHKNVLYRNKYFSNIYILMFKIAYLSNEYDFYTFFYDLTGIRLIDETVLINMDKLSMEDQTYIQYILLHLENNYNIKIEEHTNKFEELINEISLLAAYIVELTSSYKIDLNTTSVESENELKSFANIKYFVYINEFKYHGKNVSINQLVHTMSQFDTLIIKKKVLCCSNFVDEVEASLKYYLMYKYVHTGTDLVNENDDIMPPTAYNIIQTLLERPIPKSDIYDKMTKSNIDNIATHIMKESGFIHKNNITTEYKDLECIHLDSINHYDNIITHFETKYDNHGSLVSMTILKGLLKDKSIDIQEDMDYSVYFSFRNLSVPFIGKTHREETLDFKRILLLKAFPKAINESVVFYTYIDQLDGNSLFMLEKIIFVSKGNKLVKEINVEYQTFFVHPHNMILTNNMDSNTHINTYSTYFNELTRCYHYNNGIQACNYPEYGYNGFTPYYVFYTENNQRKEILFKDNEEIANLINNKPLTLTKRYNIELGGEKMDVEIYNSVEVIINEIAFSIGLKNFNEKNCSKLTLNNGLMHIPNDPNSLISSIYYETLYCLDKSAIYKKILTICNFDKEELIKLFSASDSNILPYNLEETFAKSLTHNEIINLITYFISAPYQINMMIRRTDDTDNKDVNNDIKPLILNIMEFNSTENSESKIVFIENEDIIKINKQFLQKEVDNSSLLEFNKSLYFELLKYMPDSFINEHKILIDMKDINNYLKSYINKENICNNDSYFKNNGIMLVPGETSTYNQPSFTYINNDNIYIKKKPEDSYIFNNIFLFEGKNNLDKKFLNAIVVLSPIHITEVHDISYVELIANAFDNKHQFSMKCYPHKKYDNSYFEKEFNLAPNSIYFVCMNVYTMYLKSGLYEFNKYLIKFNTTNSNTYHVYQNMPVRPVYTVKNNNIIVPDMNKIDLKLHRIKDDDMNSVLIKYLIYVDGSITLHTNPYVVVNPIFTEDSYYYNTNIRQTDDYVSFMYSR…
SIO_010081: PCHAS_1218800
subclass of: SO_0000673
so part of: PCHAS_1218800
location: 667806..677636
location: region:667806-677636:1
so has part: feature:667806-677636:1:exon

XP_743324.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:667806-677636:1:exon

PCHAS_1218900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1218900
old locus tag: PCHAS_121890
so part of: sequence
location: complement(<678766..>680373)
location: region:678766-680373:-1
so has part: feature:678766-680373:-1:exon
subclass of: SO_0000010

3494821
type: Gene
SIO_000068: ncbigene

position:678766:-1
position: 678766
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:680373:-1
position: 680373
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678766-680373:-1:exon

PCHAS_1218900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1218900
old locus tag: PCHAS_121890
product: T-complex protein 1 subunit epsilon, putative
transcript id: XM_736644.2
SIO_010081: PCHAS_1218900
subclass of: SO_0000673
so part of: PCHAS_1218900
location: complement(<678766..>680373)
location: region:678766-680373:-1
so has part: feature:678766-680373:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:678766-680373:-1:exon

PCHAS_1218900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1218900
old locus tag: PCHAS_121890
note: term=annotation;date=20150125;qualifier=removed_pro duct=T-complex protein 1 epsilon subunit, putative;qualifier=added_product=t-complex protein 1 subunit epsilon, putative;qualifier=added_literature=pmid:25615740;qualifie r=added_gene_name=cct5;curatorName=ucb@sanger.ac.uk; term=annotation;date=20170110;qualifier=added_literature=P MID:28067475;qualifier=added_GO:0005829;qualifier=added_GO :0005832;curatorName=ucb@sanger.ac.uk; ;query 513-513;GPI_cleavage_site_score=0.12900001; pfam_scan;Pfam:PF00118.20; E()=2.2E-154;score=514.6;query 39-530;description=Cpn60_TCP1; iprscan;InterPro:IPR017998 : Chaperone, tailless complex polypeptide 1;PRINTS:PR00304; score=5.9E-30;query 413-425;description=Chaperone tailless complex polypeptide 1 (TCP-1); iprscan;InterPro:IPR017998 : Chaperone, tailless complex polypeptide 1;PRINTS:PR00304; score=5.9E-30;query 63-81;description=Chaperone tailless complex polypeptide 1 (TCP-1); iprscan;InterPro:IPR017998 : Chaperone, tailless complex polypeptide 1;PRINTS:PR00304; score=5.9E-30;query 41-57;description=Chaperone tailless complex polypeptide 1 (TCP-1); iprscan;InterPro:IPR017998 : Chaperone, tailless complex polypeptide 1;PRINTS:PR00304; score=5.9E-30;query 93-112;description=Chaperone tailless complex polypeptide 1 (TCP-1); iprscan;InterPro:IPR017998 : Chaperone, tailless complex polypeptide 1;PRINTS:PR00304; score=5.9E-30;query 379-401;description=Chaperone tailless complex polypeptide 1 (TCP-1); iprscan;InterPro:IPR027410 : TCP-1-like chaperonin intermediate domain superfamily;Superfamily:SSF54849; score=1.16E-29;query 154-411;description=TCP-1-like chaperonin intermediate domain superfamily; iprscan;InterPro:IPR027409 : GroEL-like apical domain;Superfamily:SSF52029; score=1.26E-50;query 216-384;description=GroEL-like apical domain superfamily; iprscan;InterPro:IPR012718 : T-complex protein 1, epsilon subunit;TIGR_TIGRFAMS:TIGR02343; score=4.8E-237;query 3-531;description=T-complex protein 1, epsilon subunit; iprscan;InterPro:IPR002…
codon start: 1
product: T-complex protein 1 subunit epsilon, putative
translation: MNIAIDEYGQPFVILREEEKKRIKGIEAHKSNILAAKVVADILKSSIGPRGMDKIIVSEDNNVTVTNDGATILEKIDVQHECAKLLVELSKSQDNEIGDGTTGVVIIAGFLLEEAYALIDKGIHPLRIADGFENACNIALKAIEDIAITVDIEKNDHEILKKLSNTSLSSKIVSSKKDLLSNIVVDAVLSVADMKRKDVRFDLIKIEGKPGGLLEESSLIKGIVLNKEISHSQMCKEVKNAKIAILTCPFEPPKPKIKHKLNITNAEAYRDLQAIEKKYFYDMVDALKKAGANFVICQWGFDDEANYLLLKENIPAIRWVGGVEMELIAIATGGKIIPRFEDIHESKLGRADLIREISHGTVNNPMVYIEGCSNTKAITILLRGGNQMMIDECERSVHDALCSVRNLIRDNRILPGGGASEIYAALEIEKVADTCKGIEQYAIRAFGNALLSIPINLCNNMGLNSIDIISEIKTKIIQEKKKNLGIDSLNYKIGDMIEEGIFETFNSKYNQISLATQVVKMILKIDDVITPNEFN
SIO_010081: PCHAS_1218900
subclass of: SO_0000673
so part of: PCHAS_1218900
location: complement(678766..680373)
location: region:678766-680373:-1
so has part: feature:678766-680373:-1:exon

XP_741737.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:678766-680373:-1:exon

PCHAS_1219000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1219000
old locus tag: PCHAS_121900
so part of: sequence
location: complement(<681603..>683159)
location: region:681603-683159:-1
so has part: feature:681603-683159:-1:exon
subclass of: SO_0000010

27794966
type: Gene
SIO_000068: ncbigene

position:681603:-1
position: 681603
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:683159:-1
position: 683159
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681603-683159:-1:exon

PCHAS_1219000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1219000
old locus tag: PCHAS_121900
product: CPW-WPC family protein
transcript id: XM_016798885.1
SIO_010081: PCHAS_1219000
subclass of: SO_0000673
so part of: PCHAS_1219000
location: complement(<681603..>683159)
location: region:681603-683159:-1
so has part: feature:681603-683159:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:681603-683159:-1:exon

PCHAS_1219000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1219000
old locus tag: PCHAS_121900
note: pfam_scan;Pfam:PF09717.6; E()=3.8E-14;score=53.3;query 425-481;description=CPW_WPC; pfam_scan;Pfam:PF09717.6; E()=6.7E-16;score=58.9;query 304-360;description=CPW_WPC; pfam_scan;Pfam:PF09717.6; E()=3.5E-13;score=50.2;query 180-239;description=CPW_WPC; pfam_scan;Pfam:PF09717.6; E()=2.1E-14;score=54.1;query 242-301;description=CPW_WPC; pfam_scan;Pfam:PF09717.6; E()=1.5E-14;score=54.5;query 364-422;description=CPW_WPC; iprscan;InterPro:IPR006387 : Plasmodium falciparum CPW-WPC;Pfam:PF09717; score=4.3E-13;query 180-239;description=CPW-WPC domain; iprscan;InterPro:IPR006387 : Plasmodium falciparum CPW-WPC;Pfam:PF09717; score=8.2E-16;query 304-360;description=CPW-WPC domain; iprscan;InterPro:IPR006387 : Plasmodium falciparum CPW-WPC;SMART:SM01099; score=2.6E-14;query 180-240;description=CPW-WPC domain; iprscan;InterPro:IPR006387 : Plasmodium falciparum CPW-WPC;SMART:SM01099; score=1.6E-18;query 425-482;description=CPW-WPC domain; iprscan;InterPro:IPR006387 : Plasmodium falciparum CPW-WPC;Pfam:PF09717; score=1.9E-14;query 364-422;description=CPW-WPC domain; iprscan;InterPro:IPR006387 : Plasmodium falciparum CPW-WPC;SMART:SM01099; score=1.1E-20;query 364-423;description=CPW-WPC domain; iprscan;InterPro:IPR006387 : Plasmodium falciparum CPW-WPC;Pfam:PF09717; score=2.6E-14;query 242-301;description=CPW-WPC domain; iprscan;InterPro:IPR006387 : Plasmodium falciparum CPW-WPC;SMART:SM01099; score=3.0E-23;query 304-362;description=CPW-WPC domain; iprscan;InterPro:IPR006387 : Plasmodium falciparum CPW-WPC;TIGR_TIGRFAMS:TIGR01492; score=4.2E-15;query 364-421;description=CPW-WPC domain; iprscan;InterPro:IPR006387 : Plasmodium falciparum CPW-WPC;TIGR_TIGRFAMS:TIGR01492; score=3.4E-15;query 424-482;description=CPW-WPC domain; iprscan;InterPro:IPR006387 : Plasmodium falciparum CPW-WPC;TIGR_TIGRFAMS:TIGR01492; score=2.4E-17;query 303-362;description=CPW-WPC domain; iprscan;InterPro:IPR006387 : Plasmodium falciparum CPW-WPC;SMART:SM01099; score=3.1E-19;query 242-302;description=CPW-WPC do…
codon start: 1
product: CPW-WPC family protein
translation: MMKYSFIIPICFCFVFLNCSGNLTIENENRTKEKKIAKYNYGNLKKKINIEDDEKNSTVAASENKEKENNTIDEEYPNKEYKKCMDMVEKQFNDKEIGENQAIKDDLTKLCLTKKIEDEENNKKRILQKNEKDTEEMSKHKKLTDIEQNMKEIISQLGLSNKIEISYTTLNELLSELKTCSRNYRKKCPLNWKLSESNNEYCYAPDSYIGPCEKYISNDIDIGEKKQIEKKCLLFWECEKNCIQDFEHSICPLDWVLSDEEYCISPDNYKGSCLNKIKFIDMPNKEKSIYSNLCDIKWPCKEKCEHDYFDLCPDGWIETNDGYCLATNYNGTCQRKMNFKNLDKAMKQIYEQKCQFNYPCINSCEKNYDDLCPKSWTIFNENECAPSKYYNGNCKENYIFKNKNIEEKKNFEKLCNVSYPCLKKCQRDYSYNCPMGWKETLSFCLAPTYYKYDCNKMIKKNMNENEKKEISKNCNVFWPCSNYEIILKKLIYNNISNEDYLSIVNGPVDNTTGAIIDV
SIO_010081: PCHAS_1219000
subclass of: SO_0000673
so part of: PCHAS_1219000
location: complement(681603..683159)
location: region:681603-683159:-1
so has part: feature:681603-683159:-1:exon

XP_016654246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:681603-683159:-1:exon

PCHAS_1219100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1219100
old locus tag: PCHAS_121910
so part of: sequence
location: complement(<683941..>685445)
location: region:683941-685445:-1
so has part: feature:683941-685445:-1:exon
subclass of: SO_0000010

3486022
type: Gene
SIO_000068: ncbigene

position:683941:-1
position: 683941
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:685445:-1
position: 685445
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683941-685445:-1:exon

PCHAS_1219100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1219100
old locus tag: PCHAS_121910
product: protein transport protein SEC22, putative
transcript id: XM_016798886.1
SIO_010081: PCHAS_1219100
subclass of: SO_0000673
so part of: PCHAS_1219100
location: complement(join(<683941..684054,684141..684184,684281..684427,684528..684614,684834..684940,685279..>685445))
location: region:683941-685445:-1
so has part: feature:685279-685445:-1:exon
so has part: feature:684834-684940:-1:exon
so has part: feature:684528-684614:-1:exon
so has part: feature:684281-684427:-1:exon
so has part: feature:684141-684184:-1:exon
so has part: feature:683941-684054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685279-685445:-1:exon

position:685279:-1
position: 685279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:684834-684940:-1:exon

position:684834:-1
position: 684834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684940:-1
position: 684940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:684528-684614:-1:exon

position:684528:-1
position: 684528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684614:-1
position: 684614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:684281-684427:-1:exon

position:684281:-1
position: 684281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684427:-1
position: 684427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:684141-684184:-1:exon

position:684141:-1
position: 684141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684184:-1
position: 684184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:683941-684054:-1:exon

position:684054:-1
position: 684054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1219100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1219100
old locus tag: PCHAS_121910
note: term=annotation;date=20150716;qualifier=removed_pro duct=SNARE protein, putative;qualifier=added_product=protein transport protein sec22, putative;qualifier=added_gene_name=sec22;qualifier=added_l iterature=pmid:17240462;qualifier=added_literature=pmid:19 617396;qualifier=added_GO:0031201;qualifier=added_GO:00301 34;qualifier=added_GO:0016021;qualifier=added_GO:0006783;q ualifier=added_GO:0005794;qualifier=added_GO:0005484;quali fier=added_GO:0006888;curatorName=ucb@sanger.ac.uk; ;query 218-221; ;query 198-217; ;query 1-197; tmhmm; query 1-222; pfam_scan;Pfam:PF00957.17; E()=2.2E-15;score=56.1;query 139-216;description=Synaptobrevin; pfam_scan;Pfam:PF13774.2; E()=2.8E-14;score=52.8;query 33-122;description=Longin; iprscan;InterPro:IPR010908 : Longin;Pfam:PF13774; score=1.4E-14;query 33-121;description=Longin domain; iprscan;InterPro:IPR010908 : Longin;SMART:SM01270; score=3.5E-21;query 31-123;description=Longin domain; iprscan;InterPro:IPR010908 : Longin;Prosite:PS50859; score=20.449;query 6-124;description=Longin domain; iprscan;InterPro:IPR001388 : Synaptobrevin;Prosite:PS50892; score=13.502;query 139-199;description=Synaptobrevin; iprscan;InterPro:IPR001388 : Synaptobrevin;Pfam:PF00957; score=5.3E-15;query 139-216;description=Synaptobrevin; iprscan;Superfamily:SSF58038; score=7.85E-13;query 134-198;description=null; iprscan;InterPro:IPR011012 : Longin-like;Superfamily:SSF64356; score=3.02E-23;query 2-131;description=Longin-like domain superfamily
codon start: 1
product: protein transport protein SEC22, putative
translation: MCDAVLLCRVSDGLTLVETNSETKNMSHKFELKKLCKKLETFPKLSTIASNQFNYHFLIDNGIAYIAVFPLSYPKKLAFLFLNDICKQFNEELMIQYGTHSIDYRSIIETIEKPYSFIKFDRKIAKIKQEYKDPRSNVAIKKLNESLNEVSSIMRRNIDDILLRGENLEDVGRKAFNLKYESEKFKKASRILSLRYTMYQYGIVVCVIFFFFFIIVFKNYF
SIO_010081: PCHAS_1219100
subclass of: SO_0000673
so part of: PCHAS_1219100
location: complement(join(683941..684054,684141..684184,684281..684427,684528..684614,684834..684940,685279..685445))
location: region:683941-685445:-1
so has part: feature:685279-685445:-1:exon
so has part: feature:684834-684940:-1:exon
so has part: feature:684528-684614:-1:exon
so has part: feature:684281-684427:-1:exon
so has part: feature:684141-684184:-1:exon
so has part: feature:683941-684054:-1:exon

XP_016654247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:685279-685445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:684834-684940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684528-684614:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:684281-684427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:684141-684184:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:683941-684054:-1:exon

PCHAS_1219200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1219200
old locus tag: PCHAS_121920
so part of: sequence
location: complement(<687167..>688585)
location: region:687167-688585:-1
so has part: feature:687167-688585:-1:exon
subclass of: SO_0000010

3494418
type: Gene
SIO_000068: ncbigene

position:687167:-1
position: 687167
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:688585:-1
position: 688585
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687167-688585:-1:exon

PCHAS_1219200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1219200
old locus tag: PCHAS_121920
product: protein phosphatase inhibitor 2, putative
transcript id: XM_016798887.1
SIO_010081: PCHAS_1219200
subclass of: SO_0000673
so part of: PCHAS_1219200
location: complement(join(<687167..687263,687366..687502,687704..687766,688042..688150,688557..>688585))
location: region:687167-688585:-1
so has part: feature:688557-688585:-1:exon
so has part: feature:688042-688150:-1:exon
so has part: feature:687704-687766:-1:exon
so has part: feature:687366-687502:-1:exon
so has part: feature:687167-687263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:688557-688585:-1:exon

position:688557:-1
position: 688557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:688042-688150:-1:exon

position:688042:-1
position: 688042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688150:-1
position: 688150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:687704-687766:-1:exon

position:687704:-1
position: 687704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687766:-1
position: 687766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:687366-687502:-1:exon

position:687366:-1
position: 687366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687502:-1
position: 687502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:687167-687263:-1:exon

position:687263:-1
position: 687263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1219200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1219200
old locus tag: PCHAS_121920
note: term=annotation;date=20130711;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=protein phosphatase inhibitor 2, putative;qualifier=added_literature=pmid:23837822;curatorN ame=ucb@sanger.ac.uk; ;query 115-115;GPI_cleavage_site_score=0.344; pfam_scan;Pfam:PF04979.10; E()=1.9E-12;score=47.9;query 15-120;description=IPP-2; iprscan;InterPro:IPR007062 : Protein phosphatase inhibitor 2 (IPP-2);Pfam:PF04979; score=2.6E-12;query 15-120;description=Protein phosphatase inhibitor 2 (IPP-2)
codon start: 1
product: protein phosphatase inhibitor 2, putative
translation: MKKKINKTAAKKTISWDEVTINEQDKERGSRMKILEPNTPFNFIVMDSASEDETSKIGESKTNAEGQDNIADDLINKLNQLVEKQDSKGVSNIDFKEKRKKHYNEYKILQKLRKSGTFDEIGEEYKLEYNDSNDDNNNAQDTEE
SIO_010081: PCHAS_1219200
subclass of: SO_0000673
so part of: PCHAS_1219200
location: complement(join(687167..687263,687366..687502,687704..687766,688042..688150,688557..688585))
location: region:687167-688585:-1
so has part: feature:688557-688585:-1:exon
so has part: feature:688042-688150:-1:exon
so has part: feature:687704-687766:-1:exon
so has part: feature:687366-687502:-1:exon
so has part: feature:687167-687263:-1:exon

XP_016654248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:688557-688585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688042-688150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687704-687766:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687366-687502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:687167-687263:-1:exon

PCHAS_1219300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1219300
old locus tag: PCHAS_121930
so part of: sequence
location: <691044..>691886
location: region:691044-691886:1
so has part: feature:691044-691886:1:exon
subclass of: SO_0000010

27794967
type: Gene
SIO_000068: ncbigene

position:691044:1
position: 691044
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:691886:1
position: 691886
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691044-691886:1:exon

PCHAS_1219300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1219300
old locus tag: PCHAS_121930
product: conserved protein, unknown function
transcript id: XM_016798889.1
SIO_010081: PCHAS_1219300
subclass of: SO_0000673
so part of: PCHAS_1219300
location: <691044..>691886
location: region:691044-691886:1
so has part: feature:691044-691886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:691044-691886:1:exon

PCHAS_1219300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1219300
old locus tag: PCHAS_121930
note: query 247-247;GPI_cleavage_site_score=1.72
codon start: 1
product: conserved protein, unknown function
translation: MTENTQLIDAGCFISQMNELLLIDPLYMNYAITNYFNHLINDKSELLPKESLNGVYFENAKAGLWSSFAIKEKNIFLPNSQQMEQNMNDLGIDKNYGNEIITSFACFNNTEFMHEYLTVEKLNELKWERLESNINCIGGLNNGNAYKSQSNEEDNPINFSNYFTNILTVESGQVGLFCTESIKNCTSALLEKYEIYDIKNKEELENFFNKNMNDLYPWYNKICNSTLSSSIAIIDYIDMPLGSVCMSGSDCVSNYLCEVVKDDVTGEIWAIRVNFLNPFK
SIO_010081: PCHAS_1219300
subclass of: SO_0000673
so part of: PCHAS_1219300
location: 691044..691886
location: region:691044-691886:1
so has part: feature:691044-691886:1:exon

XP_016654249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:691044-691886:1:exon

PCHAS_1219400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1219400
old locus tag: PCHAS_121940
so part of: sequence
location: <692894..>694210
location: region:692894-694210:1
so has part: feature:692894-694210:1:exon
subclass of: SO_0000010

3493066
type: Gene
SIO_000068: ncbigene

position:692894:1
position: 692894
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:694210:1
position: 694210
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692894-694210:1:exon

PCHAS_1219400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1219400
old locus tag: PCHAS_121940
product: conserved Plasmodium protein, unknown function
transcript id: XM_734908.2
SIO_010081: PCHAS_1219400
subclass of: SO_0000673
so part of: PCHAS_1219400
location: <692894..>694210
location: region:692894-694210:1
so has part: feature:692894-694210:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:692894-694210:1:exon

PCHAS_1219400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1219400
old locus tag: PCHAS_121940
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MILKDKKKNQEIGVYEKEIFEELQKVYKKEKFFKYVDEKNYENFIYEKKKNSTECKFVVKNNVQVKDKQNNCSHVVYPNLNAIRAFKNFIGKEINIESVYDDDSFFSSKQNDKLSFIKKSDNHEYYKNEINKISIDRQSSQNVITRIEEIKNIICFIKNTYNNQFIEDENKKINNIEDYYEQILCIFFSIENMLNTIINYGEKCDDNFCDNSKYYKYIGKYCTNLRDNENGMKINKTTIFELIDILKTKKNTDKMNILNYNNILSFQKLVVKNNFEDLTQKAAIYESVLSENCLNENTITMLPSFFFFVNMCLNDNIYKRILNYIYLINFKLKKKKEYLENYNNIKTLDMLYSYVQSITSKDQMLYDDFPKFIETTFQLNLNKDVENLLCLYKQLLKCEINMDLITKETNKLNKNITNISQNLENINAQIVKSYEGLS
SIO_010081: PCHAS_1219400
subclass of: SO_0000673
so part of: PCHAS_1219400
location: 692894..694210
location: region:692894-694210:1
so has part: feature:692894-694210:1:exon

XP_740001.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:692894-694210:1:exon

PCHAS_1219500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1219500
old locus tag: PCHAS_121950
so part of: sequence
location: complement(<694494..>703114)
location: region:694494-703114:-1
so has part: feature:694494-703114:-1:exon
subclass of: SO_0000010

3490574
type: Gene
SIO_000068: ncbigene

position:694494:-1
position: 694494
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:703114:-1
position: 703114
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694494-703114:-1:exon

PCHAS_1219500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1219500
old locus tag: PCHAS_121950
product: ABC transporter I family member 1, putative
transcript id: XM_016798890.1
SIO_010081: PCHAS_1219500
subclass of: SO_0000673
so part of: PCHAS_1219500
location: complement(join(<694494..694600,694727..702408,702505..702607,702973..>703114))
location: region:694494-703114:-1
so has part: feature:702973-703114:-1:exon
so has part: feature:702505-702607:-1:exon
so has part: feature:694727-702408:-1:exon
so has part: feature:694494-694600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:702973-703114:-1:exon

position:702973:-1
position: 702973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:702505-702607:-1:exon

position:702505:-1
position: 702505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702607:-1
position: 702607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:694727-702408:-1:exon

position:694727:-1
position: 694727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702408:-1
position: 702408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:694494-694600:-1:exon

position:694600:-1
position: 694600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1219500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1219500
old locus tag: PCHAS_121950
note: belongs to the ABC transporter superfamily (TC 3.A.1) (PMID:26796412); tmhmm; query 1-2678; term=annotation;date=20150205;qualifier=removed_product=AB C transporter, putative;qualifier=added_product=abc transporter i family member 1, putative;qualifier=added_gene_name=abci3;qualifier=added_l iterature=pmid:20541973;curatorName=ucb@sanger.ac.uk; term=annotation;date=20180319;qualifier=added_GO:0016021;c uratorName=ucb@sanger.ac.uk; ;query 1-20; ;query 520-544; ;query 600-605; ;query 658-676; ;query 1744-1770; ;query 1826-1831; ;query 1887-1963; ;query 21-40; ;query 500-519; ;query 545-567; ;query 577-599; ;query 606-625; ;query 635-657; ;query 677-699; ;query 1721-1743; ;query 1771-1793; ;query 1803-1825; ;query 1832-1854; ;query 1864-1886; ;query 1964-1983; ;query 41-499; ;query 568-576; ;query 626-634; ;query 700-1720; ;query 1794-1802; ;query 1855-1863; ;query 1984-2677; true; pfam_scan;Pfam:PF00005.23; E()=3.7E-15;score=56.5;query 818-1031;description=ABC_tran; iprscan;InterPro:IPR003593 : AAA+ ATPase, core;SMART:SM00382; score=1.9E-6;query 827-1087;description=AAA+ ATPase domain; iprscan;InterPro:IPR003439 : ABC transporter related;Pfam:PF00005; score=3.8E-15;query 818-1031;description=ABC transporter-like; iprscan;InterPro:IPR003439 : ABC transporter related;Prosite:PS50893; score=16.76;query 803-1102;description=ABC transporter-like; iprscan;InterPro:IPR027417 : P-loop containing nucleoside triphosphate hydrolase;Superfamily:SSF52540; score=1.14E-39;query 798-1086;description=P-loop containing nucleoside triphosphate hydrolase; iprscan;InterPro:IPR027417 : P-loop containing nucleoside triphosphate hydrolase;Superfamily:SSF52540; score=1.76E-6;query 2196-2296;description=P-loop containing nucleoside triphosphate hydrolase
codon start: 1
product: ABC transporter I family member 1, putative
translation: MKTRKLYGLIKKTYYEKKKNPILYFFFLLIPFSLILFHLFLRSLSEKYSFELANLFSENDKIDLNDTIRQYVLFMSNDLCSKEINDTIYVNHICLTPPSKIINDFMKYTNENDMNIFRVYNSEEECEKNFKYAIFLNENDVKGLGKNKEKNNIKLSYQSIQFNKQLLNNFKNKITNNYNDNNNELTIDDLYKNIYSDKEYEKLAKLKIDQHTLNTIKKTKLYKKFIKDIRSIKNESQYKEFVKNKKNILFFHNFVRNEVVETNYSCGLLGIENLKYEAKRDDKKKQPNLLFPSIVGKYLNKLSDNKKIDHTKKINDQNITNLSITPTLSSTDYAHRNNFRLNKQGNNNVKSVKNDNLNFNDDEPISNIRYKIRVGDYALLNSNEKIFFNDININLKQNFINFNTVDDLSFNIYFNEWYYNSFFMALEYHFNYFLLKYNKFKDNNNEELENSVINKSIVQSQEEPNDDIKYITNFSLENFYSYKMPLKNLKINAFDALEKNIFRIILFLCICLFIINICFDINKERKINMENFLFCIKVNKYYYYFSWLLFYFIVLFFYNIIFTYIIYLYIFKKLMNYFILFYYIYMFIMNSLLVTVICVHFSYNSAINYIASFLLFFLFSTFRLIIHSGAKKSLISLVLLIPHSSFCLALDFIFILIKNDIKITFNEMFITIEDICLMDLTIYPLVSFVMLVSILTFIIYIKSNDTINFSFKVVPSTKNKNIHQKNDNTTMLADSKTEDNLYNLEFDSEITNPKNKSINKKNESINQLYMAEQNALSINKKHKFIKTAYNNDEEAIANNKCCLFIKNVNKFYGKKQALKNISLTLRSNRIFVLLGENGSGKSTLINIITKMINKDSGEISFVKNNFKLPKKKRGIQRHEEAISIDTMPNTSKGIQNNKYKKQSNENDDLTDSTSINSSTTETEYKLNKLKNVNKIKNQSKKALEISFCSQNVILYDNLTFYEIIKIFLLYYNKDVNKYLKKKRTLKMLNGLDLSKYLNDKIKNLIDEIKKKISIFICFLVKRDIYILDEPFIALDIKTKTKLFKFFDKIKKNNIILICTHDIYEANKFADDIAVIKSGEIVFNGTKRYFQNIINYKFILNVRFNSPSCDNNSKYDNISINENNVISAISKEINKNDENFKPSFAYEDSVSSDKKNKKSKDKSKNTIFDLINGDIKNDEDSIESIKSSFIKYIKDSREYNKNCYIFFNRNYIYCTYKINELDKLKNVISILNKLKNVLHYELKTIDIYYTYIYIYTYNEKIKLLKTIRDKGVKKLIKMDPLFYMFYYNTQYFNNIKNQLIMESKKKGNKAITDFGYLNDIVLGKKNESNTTFMESNFNKANNVNFVNDNKLNKNSGSQLGQEGYIEDTNYYNKNNDKYEVNKLNMKNSENYNNYDDSNNYTIIQKLQNFFSVYIAPSVFLKLNKDLSDMNFYWYKFLVPLLLLSCGLLIIKCVSLFGKVQYIELDNSTISSSHLKESIINYGIIYRLKVDGSDEYIYNMPEVDKYKRKRKFLTGPFKKYFNLYEENRNNNYIKTKATNSDHPSDIYNNRGKHLFNYYNNTLFMLFKKYSLKENVNYISTSIDEDSLYDNISEYLELKSKLNNDLSLGTYVIVINETQNTDENNNIQTNIEMDVNLFHNYTSIHSYPYYTNLVFNVLYDFQNIVNNRNRQQGNVISGIEINNKNIHGVSQKEKNNKNINDEEFYTKRTDVKNEPFRIKYHEYFIRDFYINMYVFLSVIIFFCVFFERLKNEIENKKIFTNFDVNKFIHYFQIIILDYFYFILYIIFLFIVLYIFGCTEFLYPSFFFFLMMFGFNTFLSISLFSSLYLNSYIIFLFVNFILCAIISIGIYVIVLLSYAYNNAFLVKLSHVFICIFRILDSFCLSHALNIRSLCLNLKRDLKTIDSDTIINTQLYYTQWNSSKYEQSTNFFQRIFQNNFVEDGPDDSSQTIPDACSNENSFFSERWDFVFIFINCSIYFILLLYKLYRLRYFQKKKKMANEKLQ…
SIO_010081: PCHAS_1219500
subclass of: SO_0000673
so part of: PCHAS_1219500
location: complement(join(694494..694600,694727..702408,702505..702607,702973..703114))
location: region:694494-703114:-1
so has part: feature:702973-703114:-1:exon
so has part: feature:702505-702607:-1:exon
so has part: feature:694727-702408:-1:exon
so has part: feature:694494-694600:-1:exon

XP_016654250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:702973-703114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702505-702607:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:694727-702408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:694494-694600:-1:exon

PCHAS_1219600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1219600
old locus tag: PCHAS_121960
so part of: sequence
location: complement(<704503..>705213)
location: region:704503-705213:-1
so has part: feature:704503-705213:-1:exon
subclass of: SO_0000010

3496030
type: Gene
SIO_000068: ncbigene

position:704503:-1
position: 704503
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:705213:-1
position: 705213
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704503-705213:-1:exon

PCHAS_1219600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1219600
old locus tag: PCHAS_121960
product: elongation factor 1-delta, putative
transcript id: XM_737839.1
SIO_010081: PCHAS_1219600
subclass of: SO_0000673
so part of: PCHAS_1219600
location: complement(join(<704503..704697,704794..704944,705086..>705213))
location: region:704503-705213:-1
so has part: feature:705086-705213:-1:exon
so has part: feature:704794-704944:-1:exon
so has part: feature:704503-704697:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:705086-705213:-1:exon

position:705086:-1
position: 705086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:704794-704944:-1:exon

position:704794:-1
position: 704794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704944:-1
position: 704944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:704503-704697:-1:exon

position:704697:-1
position: 704697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1219600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1219600
old locus tag: PCHAS_121960
note: term=annotation;date=20170219;qualifier=removed_pro duct=elongation factor 1 (EF-1), putative;qualifier=added_product=elongation factor 1-delta, putative;qualifier=added_literature=pmid:17307963;qualifie r=added_GO:0005853;qualifier=added_gene_name=ef- 1delta;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF00736.15; E()=2.8E-32;score=110.6;query 45-157;description=EF1_GNE; iprscan;InterPro:IPR014038 : Translation elongation factor EF1B, beta and delta chains, guanine nucleotide exchange;Pfam:PF00736; score=1.5E-32;query 45-157;description=Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain; iprscan;InterPro:IPR014038 : Translation elongation factor EF1B, beta and delta chains, guanine nucleotide exchange;SMART:SM00888; score=4.9E-31;query 43-157;description=Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain; iprscan;InterPro:IPR036219 : Translation elongation factor eEF-1beta-like superfamily;Superfamily:SSF54984; score=3.14E-24;query 39-157;description=Translation elongation factor eEF-1beta-like superfamily
codon start: 1
product: elongation factor 1-delta, putative
translation: MANTYDELYVPLSYYILHNDGNADNSGTSQGAKKGNKKKEVGKSSLIIDIKPYGEDTDLEEVLKLVKEIEMEGLTWGKAHKKTPFAFGLFKLQVSCIIVDDLVNTDELIEMIENVGLSEEDCKKKKELQEQMNEDEDVEDTIEGLVQSAEIISFNKL
SIO_010081: PCHAS_1219600
subclass of: SO_0000673
so part of: PCHAS_1219600
location: complement(join(704503..704697,704794..704944,705086..705213))
location: region:704503-705213:-1
so has part: feature:705086-705213:-1:exon
so has part: feature:704794-704944:-1:exon
so has part: feature:704503-704697:-1:exon

XP_742932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:705086-705213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:704794-704944:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704503-704697:-1:exon

PCHAS_1219700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1219700
old locus tag: PCHAS_121970
so part of: sequence
location: complement(<706001..>708739)
location: region:706001-708739:-1
so has part: feature:706001-708739:-1:exon
subclass of: SO_0000010

3496029
type: Gene
SIO_000068: ncbigene

position:706001:-1
position: 706001
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:708739:-1
position: 708739
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706001-708739:-1:exon

PCHAS_1219700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1219700
old locus tag: PCHAS_121970
product: heat shock protein 90, putative
transcript id: XM_737838.2
SIO_010081: PCHAS_1219700
subclass of: SO_0000673
so part of: PCHAS_1219700
location: complement(<706001..>708739)
location: region:706001-708739:-1
so has part: feature:706001-708739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:706001-708739:-1:exon

PCHAS_1219700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1219700
old locus tag: PCHAS_121970
note: query 887-887;GPI_cleavage_site_score=0.2052; pfam_scan;Pfam:PF06047.7; E()=1.6E-46;score=156.5;query 799-898;description=SynMuv_product; iprscan;InterPro:IPR009269 : Protein of unknown function DUF926;Pfam:PF06047; score=1.2E-46;query 799-898;description=NF-kappa-B-activating protein
codon start: 1
product: heat shock protein 90, putative
translation: MTVNSENEISNSEKEDNDISVKDNENDEDQESASNNENDEGQESADNDETDEDQESGDNNETGEDQENADSNENDEDQESASNNENDDKSEKTHFEKKHKELKERLKMLKVNSNSTSNISMDNNGNNNDNEKCDSNKKDENSSTPKEEMTPEKREREKKYMELKKKLDLLKLKKKIANNENNNSNSLKQNNESYNNNINKGEQNSSAEKKETLIKDKEKMRETLKKKLEKLKRENELYNYEKQQKKDEYNHSRDSNSSDYKKQKKHKKKRRSNTNENSDSYYDKNKYKYDDNKRGHEKYRKTAMRSSYDSSSISNDRMLNKRRREISPSSNSFRKKDKPHRKRSRTHSSSRSHSNRKGGRGKRRRSTYSNSSGESKWRMRRVSRNRKDGRKNYDHAKGYDNRRSYNKYKRSESRYYSSDSDFHKNKRNYISKENKKRDLYDDRHSNYKRGEKSSHKYLYNKKNGEKIEKKYHRVPLGHYADKESWNNYTNWLQKKNEYRFDLPFDQHKIYRRSQSLSPTTWENILENSMSKDSDQNDKKIKNKKNKNKHTASSESIDHSIDQNEKKKKKSTDDKKEKKKKKKKKYNSETEHSELSSHSEYSSKKKDKKEKKKKKKKSTELTYSDSEHMDKKYKSKSSVEGYSNSSDEEYKKRKKHDKKKKKKKKEKEKSKKHGSHKKDKDRKSKRKKKYDDSDEDIGKSNSTSATSLSFLCEGYDSLNEKLDKRDASNSIEKHKDKKKKHKKKNNKEEYKKNQESQQSEQSEKEEPEDDENENEVTDDDTDSVGPKPLDINVKLANKQMDYGGAMMPGEGQAIAQFIQKGKRIPRRGEVGLSAEAIENFESLGYVMSGSRHKRMNAIRMRKENQVYSAEEQRALAMFNYEERANRENALITDLKEILRKQNETILNDEKNDT
SIO_010081: PCHAS_1219700
subclass of: SO_0000673
so part of: PCHAS_1219700
location: complement(706001..708739)
location: region:706001-708739:-1
so has part: feature:706001-708739:-1:exon

XP_742931.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:706001-708739:-1:exon

PCHAS_1219800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1219800
old locus tag: PCHAS_121980
so part of: sequence
location: complement(<710158..>711067)
location: region:710158-711067:-1
so has part: feature:710158-711067:-1:exon
subclass of: SO_0000010

3496535
type: Gene
SIO_000068: ncbigene

position:710158:-1
position: 710158
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:711067:-1
position: 711067
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:710158-711067:-1:exon

PCHAS_1219800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1219800
old locus tag: PCHAS_121980
product: inner membrane complex protein 1d, putative
transcript id: XM_016798891.1
SIO_010081: PCHAS_1219800
subclass of: SO_0000673
so part of: PCHAS_1219800
location: complement(join(<710158..710865,711035..>711067))
location: region:710158-711067:-1
so has part: feature:711035-711067:-1:exon
so has part: feature:710158-710865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:711035-711067:-1:exon

position:711035:-1
position: 711035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:710158-710865:-1:exon

position:710865:-1
position: 710865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1219800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1219800
old locus tag: PCHAS_121980
note: term=annotation;date=20140315;qualifier=removed_pro duct=heat shock protein 90, putative;qualifier=added_product=inner membrane complex protein 1d, putative;qualifier=added_gene_name=imc1d;qualifier=added_l iterature=pmid:15533999;curatorName=ucb@sanger.ac.uk
codon start: 1
product: inner membrane complex protein 1d, putative
translation: MLLQDINECANNDGDSVEINTKNDFINQENEMHVSVIKPITKRVIHYEDTKINAFYKPVELVEEVNTYVKKGDEYLVKLYENIKKLYKKNSESKLKSDMGLMKYNAQYNINNSVEQDIKNDNVQFNLYKGNNGVPKIETLFIPKLEKNIEVVNCLKEHINVDYTYLVPKPVVIPVDVPILKFKDNYKIVPIRKKIIPRIKYTDEVIYVDCCIEKPYIVYDDIILPVPCDVPIEENKYIDNAPLISE
SIO_010081: PCHAS_1219800
subclass of: SO_0000673
so part of: PCHAS_1219800
location: complement(join(710158..710865,711035..711067))
location: region:710158-711067:-1
so has part: feature:711035-711067:-1:exon
so has part: feature:710158-710865:-1:exon

XP_016654251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:711035-711067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:710158-710865:-1:exon

PCHAS_1219900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1219900
old locus tag: PCHAS_121990
so part of: sequence
location: complement(<711980..>712606)
location: region:711980-712606:-1
so has part: feature:711980-712606:-1:exon
subclass of: SO_0000010

3497046
type: Gene
SIO_000068: ncbigene

position:711980:-1
position: 711980
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:712606:-1
position: 712606
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:711980-712606:-1:exon

PCHAS_1219900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1219900
old locus tag: PCHAS_121990
product: Cg8 protein, putative
transcript id: XM_738843.1
SIO_010081: PCHAS_1219900
subclass of: SO_0000673
so part of: PCHAS_1219900
location: complement(<711980..>712606)
location: region:711980-712606:-1
so has part: feature:711980-712606:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:711980-712606:-1:exon

PCHAS_1219900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1219900
old locus tag: PCHAS_121990
note: tmhmm; query 1-209; ;query 126-208; ;query 103-125; ;query 1-102
codon start: 1
product: Cg8 protein, putative
translation: MQLYLNGKKQICIRLNSNAHNVFKRYVASQPLGINIPEPPPREFLPNGEPKKYRLNQRYYNHKYDWERWSLRPAGVFHTYLHGEFAKDHKPHMAWLLQFPLPLAFIPYFLFAFGLSFTFHHVSYLGIKPKRYTVEWVEANKERERAENTNPVTRYLDRRRKERGPHWILEDYLPAHPCYLHMSQYHHDTELLRKREEEAAEKEDSSDD
SIO_010081: PCHAS_1219900
subclass of: SO_0000673
so part of: PCHAS_1219900
location: complement(711980..712606)
location: region:711980-712606:-1
so has part: feature:711980-712606:-1:exon

XP_743936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:711980-712606:-1:exon

PCHAS_1220000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1220000
old locus tag: PCHAS_122000
so part of: sequence
location: <715926..>718436
location: region:715926-718436:1
so has part: feature:715926-718436:1:exon
subclass of: SO_0000010

3490569
type: Gene
SIO_000068: ncbigene

position:715926:1
position: 715926
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:718436:1
position: 718436
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715926-718436:1:exon

PCHAS_1220000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1220000
old locus tag: PCHAS_122000
product: heat shock protein 110, putative
transcript id: XM_732453.2
SIO_010081: PCHAS_1220000
subclass of: SO_0000673
so part of: PCHAS_1220000
location: <715926..>718436
location: region:715926-718436:1
so has part: feature:715926-718436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:715926-718436:1:exon

PCHAS_1220000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1220000
old locus tag: PCHAS_122000
note: term=annotation;date=20111024;qualifier=added_gene_ name=HSP70-z;qualifier=removed_product=cg4 protein, putative;qualifier=added_product=heat shock protein 70, putative;curatorName=ucb@sanger.ac.uk; term=annotation;date=20121221;qualifier=removed_product=he at shock protein 70, putative;qualifier=added_product=heat shock protein 110, putative;qualifier=added_gene_name=hsp110c;qualifier=added _literature=pmid:23250440;curatorName=ucb@sanger.ac.uk; term=annotation;date=20160226;qualifier=added_GO:0005737;q ualifier=added_GO:0016887;qualifier=added_GO:0009408;quali fier=added_GO:0006457;qualifier=added_literature=pmid:2608 3397;qualifier=added_literature=pmid:26894764;curatorName= ucb@sanger.ac.uk; pfam_scan;Pfam:PF00012.16; E()=7.7E-46;score=156.3;query 3-256;description=HSP70; pfam_scan;Pfam:PF00012.16; E()=2.7E-30;score=105.0;query 275-702;description=HSP70; iprscan;InterPro:IPR029048 : Heat shock protein 70kD, C-terminal domain;Superfamily:SSF100934; score=2.94E-11;query 635-705;description=Heat shock protein 70kD, C-terminal domain superfamily; iprscan;InterPro:IPR013126 : Heat shock protein 70;Pfam:PF00012; score=1.6E-44;query 3-256;description=Heat shock protein 70 family; iprscan;InterPro:IPR013126 : Heat shock protein 70;PRINTS:PR00301; score=1.8E-9;query 365-381;description=Heat shock protein 70 family; iprscan;InterPro:IPR013126 : Heat shock protein 70;Pfam:PF00012; score=3.8E-30;query 275-702;description=Heat shock protein 70 family; iprscan;InterPro:IPR013126 : Heat shock protein 70;PRINTS:PR00301; score=1.8E-9;query 396-416;description=Heat shock protein 70 family; iprscan;InterPro:IPR013126 : Heat shock protein 70;PRINTS:PR00301; score=1.8E-9;query 30-42;description=Heat shock protein 70 family; iprscan;InterPro:IPR013126 : Heat shock protein 70;PRINTS:PR00301; score=1.8E-9;query 2-15;description=Heat shock protein 70 family; iprscan;Superfamily:SSF53067; score=3.96E-29;query 195-412;description=null; iprscan;Superfamily:SSF53067; score=2.24E-36;query 1-…
codon start: 1
product: heat shock protein 110, putative
translation: MSVLGIDIGNDNSVVATINKGAINIVRNDISERLTPTLIGFTEKERLIGDNALAKVKSNFRNTCRNIKNVLGKVGTGLEEDDLELNEAYGDLVECEHGYLGYDVEYKKEKERISAVRIIATLLLFLIRMGEKFIGKECNELVLSYPPNYTNNQIHCLAAAAKIINVNVLRLISDNTAVALDYGMYRMKEFNDKNGSIVAFVNIGYANTYVGIAKFYSNKCEILCDIADPTLGGRNIDNELIKYINNLFINTHKINALYSNGPIELSEMGNGKLDKTFTSKNNETAQINNKVRVKLQDVAIKTKKVLSANNETSIHVECLHEDLDCQGSIDRETYEKLCSNFFLTKLKNILDKAIAISKIGDVKNAQSIEILGGTTRIPFIQNFLESYFDKPLSKTLVADESVARGCVLSAAMQSKFYKVKEYECIEKVHHPISVKWENMNDKSGASPKVEKLYTTDSIRRKVNKIAIPDKGNIKITAFYEDSPDLPENCIKELGSCVVKINDKNDKIVESHIMTTFSNHDVFTFLGAQTVSKTVIKGKEEKEKSSEEKSADDSKDANNESSSKGEDKSQSPSSSPSKTELKKGEEGKVQTCYTTIPLEIISPPGTYSNSDIYNFSEAEINMQHSDTLEAERLKHINELETIIYETRDRLNGMYKDFVVDDERDSILLALDDVENWIYDNIDENKNAFISKKEEIRARIKDVIYRHDVYASKQKNLGNIITHLKTIITQCEKHPSDEGQKIITKANHLLSTLDSLQEKEKNKKLYEPPVYTLKDIEKEFADVTQMAQKYFSKIEAEELAKQKEKLEQEKKNEEKQTTEENGQTENNESEEKPEAADK
SIO_010081: PCHAS_1220000
subclass of: SO_0000673
so part of: PCHAS_1220000
location: 715926..718436
location: region:715926-718436:1
so has part: feature:715926-718436:1:exon

XP_737546.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:715926-718436:1:exon

PCHAS_1220100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1220100
old locus tag: PCHAS_122010
so part of: sequence
location: complement(<719659..>720525)
location: region:719659-720525:-1
so has part: feature:719659-720525:-1:exon
subclass of: SO_0000010

3494630
type: Gene
SIO_000068: ncbigene

position:719659:-1
position: 719659
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:720525:-1
position: 720525
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719659-720525:-1:exon

PCHAS_1220100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1220100
old locus tag: PCHAS_122010
product: protein SCO1, putative
transcript id: XM_736456.1
SIO_010081: PCHAS_1220100
subclass of: SO_0000673
so part of: PCHAS_1220100
location: complement(<719659..>720525)
location: region:719659-720525:-1
so has part: feature:719659-720525:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719659-720525:-1:exon

PCHAS_1220100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1220100
old locus tag: PCHAS_122010
note: term=annotation;date=20170302;qualifier=removed_pro duct=Cg3 protein, putative;qualifier=added_product=protein sco1, putative;qualifier=added_gene_name=sco1;qualifier=added_li terature=pmid:23190769;curatorName=ucb@sanger.ac.uk; pfam_scan;Pfam:PF02630.10; E()=7.6E-42;score=142.9;query 97-258;description=SCO1-SenC; iprscan;InterPro:IPR003782 : Electron transport protein SCO1/SenC;Pfam:PF02630; score=7.8E-42;query 97-258;description=Copper chaperone SCO1/SenC; iprscan;InterPro:IPR036249 : Thioredoxin-like superfamily;Superfamily:SSF52833; score=3.28E-44;query 105-277;description=Thioredoxin-like superfamily; iprscan;InterPro:IPR017276 : Synthesis of cytochrome c oxidase, Sco1/Sco2;PIRSF:PIRSF037736; score=2.1E-90;query 3-288;description=Synthesis of cytochrome c oxidase, Sco1/Sco2; iprscan;InterPro:IPR013766 : Thioredoxin domain;Prosite:PS51352; score=8.676;query 102-280;description=Thioredoxin domain
codon start: 1
product: protein SCO1, putative
translation: MNKIVLRNVSKVKGDGVFCKSYIKFNLNKYENKINFETKLNFSTNKRNEENPLKKKKSIFLTWKCFVFNLGLCIPTLYLYKLQCDKKHGGKNHIGKTRVENIGKPLIGGNFTLIDYNGNIVTNQTFKGKYCLIYFGFSYCPDICPQELEKQTIVFEKISKKYGDIVTPIFITVDPNRDTVAQINYYCKSFNPKLIGLTGTKDLIKHVAKLFRVYYNEHITDMGNTNQTVTNQNKYNYLIDHSIIHYLLDTEGKFVDFFGKNCTINEMVDRISQYLDEHIASQKKLQKN
SIO_010081: PCHAS_1220100
subclass of: SO_0000673
so part of: PCHAS_1220100
location: complement(719659..720525)
location: region:719659-720525:-1
so has part: feature:719659-720525:-1:exon

XP_741549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:719659-720525:-1:exon

PCHAS_1220200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1220200
old locus tag: PCHAS_122020
so part of: sequence
location: <721648..>724625
location: region:721648-724625:1
so has part: feature:721648-724625:1:exon
subclass of: SO_0000010

3494001
type: Gene
SIO_000068: ncbigene

position:721648:1
position: 721648
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:724625:1
position: 724625
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721648-724625:1:exon

PCHAS_1220200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1220200
old locus tag: PCHAS_122020
product: chloroquine resistance transporter, putative
transcript id: XM_016798892.1
SIO_010081: PCHAS_1220200
subclass of: SO_0000673
so part of: PCHAS_1220200
location: join(<721648..721738,722218..722565,722681..722774,722888..723020,723142..723213,723365..723440,723550..723632,723751..723801,723910..723966,724061..724153,724246..724290,724384..724438,724549..>724625)
location: region:721648-724625:1
so has part: feature:721648-721738:1:exon
so has part: feature:722218-722565:1:exon
so has part: feature:722681-722774:1:exon
so has part: feature:722888-723020:1:exon
so has part: feature:723142-723213:1:exon
so has part: feature:723365-723440:1:exon
so has part: feature:723550-723632:1:exon
so has part: feature:723751-723801:1:exon
so has part: feature:723910-723966:1:exon
so has part: feature:724061-724153:1:exon
so has part: feature:724246-724290:1:exon
so has part: feature:724384-724438:1:exon
so has part: feature:724549-724625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721648-721738:1:exon

position:721738:1
position: 721738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:722218-722565:1:exon

position:722218:1
position: 722218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722565:1
position: 722565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:722681-722774:1:exon

position:722681:1
position: 722681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722774:1
position: 722774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:722888-723020:1:exon

position:722888:1
position: 722888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723020:1
position: 723020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:723142-723213:1:exon

position:723142:1
position: 723142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723213:1
position: 723213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:723365-723440:1:exon

position:723365:1
position: 723365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723440:1
position: 723440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:723550-723632:1:exon

position:723550:1
position: 723550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723632:1
position: 723632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:723751-723801:1:exon

position:723751:1
position: 723751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723801:1
position: 723801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:723910-723966:1:exon

position:723910:1
position: 723910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723966:1
position: 723966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:724061-724153:1:exon

position:724061:1
position: 724061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724153:1
position: 724153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:724246-724290:1:exon

position:724246:1
position: 724246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724290:1
position: 724290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:724384-724438:1:exon

position:724384:1
position: 724384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724438:1
position: 724438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:724549-724625:1:exon

position:724549:1
position: 724549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1220200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1220200
old locus tag: PCHAS_122020
note: term=annotation;date=20170806;qualifier=added_liter ature=PMID:28768767;qualifier=added_GO:0015684;qualifier=a dded_GO:0015682;qualifier=added_GO:0015091;qualifier=added _GO:0015093;curatorName=ucb@sanger.ac.uk; ;query 1-55; ;query 111-125; ;query 178-178; ;query 230-241; ;query 338-343; ;query 399-424; ;query 56-73; ;query 88-110; ;query 126-148; ;query 158-177; ;query 179-201; ;query 211-229; ;query 242-264; ;query 315-337; ;query 344-366; ;query 376-398; ;query 74-87; ;query 149-157; ;query 202-210; ;query 265-314; ;query 367-375; tmhmm; query 1-425; pfam_scan;Pfam:PF08627.6; E()=4.4E-99;score=331.4;query 59-391;description=CRT-like; iprscan;InterPro:IPR013936 : Chloroquine-resistance transporter-like;Pfam:PF08627; score=2.2E-101;query 59-391;description=Chloroquine-resistance transporter-like; iprscan;InterPro:IPR017258 : Transmembrane transporter protein, chloroquine resistant;PIRSF:PIRSF037671; score=4.2E-171;query 1-424;description=Chloroquine resistance transporter
codon start: 1
product: chloroquine resistance transporter, putative
translation: MTGMKKGKNKKKNVKNDERYKELDSLISNDSEIGNNSRWGGAKRICKLIGNEMRNNIYVYLLSILYLCVSVMNKVFSKRTLNKIGNYSFVTSEVHNMICTIVFQLLYFIYRKTSNPASRNESQKNFGWQFFLISLLDASTVIITMIGLTRTTGNIQSFIMQLIIPVNMYFCFIFLGYRYHLFNYLGAFIILITIAAVETVLSYETQSDNSIIFNLIMIFALIPLSFSNMTREVVFKKHKINIIRLNAMVALFQFFTSLLVLPVYNISFLKEIYMPFSEMGTNINDGLRCLFYGQSTIVENCGVGMVKMCDQCEGAWKTFITYSFFNICDNLLVCYIIDKFSTMTYTIVSCIQGPAITIAYYFKFLAGDVVRQPRLLDFLTLFGYLLGTIIYRIGNIILEKKKMLKAQNTDGSEAELTSIETSTA
SIO_010081: PCHAS_1220200
subclass of: SO_0000673
so part of: PCHAS_1220200
location: join(721648..721738,722218..722565,722681..722774,722888..723020,723142..723213,723365..723440,723550..723632,723751..723801,723910..723966,724061..724153,724246..724290,724384..724438,724549..724625)
location: region:721648-724625:1
so has part: feature:721648-721738:1:exon
so has part: feature:722218-722565:1:exon
so has part: feature:722681-722774:1:exon
so has part: feature:722888-723020:1:exon
so has part: feature:723142-723213:1:exon
so has part: feature:723365-723440:1:exon
so has part: feature:723550-723632:1:exon
so has part: feature:723751-723801:1:exon
so has part: feature:723910-723966:1:exon
so has part: feature:724061-724153:1:exon
so has part: feature:724246-724290:1:exon
so has part: feature:724384-724438:1:exon
so has part: feature:724549-724625:1:exon

XP_016654252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:721648-721738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:722218-722565:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:722681-722774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722888-723020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:723142-723213:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:723365-723440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:723550-723632:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:723751-723801:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:723910-723966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:724061-724153:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:724246-724290:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724384-724438:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:724549-724625:1:exon

PCHAS_1220300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1220300
old locus tag: PCHAS_122030
so part of: sequence
location: <726455..>729382
location: region:726455-729382:1
so has part: feature:726455-729382:1:exon
subclass of: SO_0000010

3497231
type: Gene
SIO_000068: ncbigene

position:726455:1
position: 726455
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:729382:1
position: 729382
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726455-729382:1:exon

PCHAS_1220300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1220300
old locus tag: PCHAS_122030
product: cg1 protein, putative
transcript id: XM_016798894.1
SIO_010081: PCHAS_1220300
subclass of: SO_0000673
so part of: PCHAS_1220300
location: <726455..>729382
location: region:726455-729382:1
so has part: feature:726455-729382:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:726455-729382:1:exon

PCHAS_1220300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1220300
old locus tag: PCHAS_122030
note: pfam_scan;Pfam:PF08755.7; E()=4.5E-12;score=46.2;query 815-949;description=YccV-like; iprscan;InterPro:IPR036623 : Hemimethylated DNA-binding domain superfamily;Superfamily:SSF141255; score=1.57E-10;query 814-949;description=Hemimethylated DNA-binding domain superfamily; iprscan;InterPro:IPR011722 : Hemimethylated DNA-binding region;Pfam:PF08755; score=3.1E-11;query 815-949;description=Hemimethylated DNA-binding domain; iprscan;InterPro:IPR011722 : Hemimethylated DNA-binding region;SMART:SM00992; score=2.5E-4;query 812-958;description=Hemimethylated DNA-binding domain
codon start: 1
product: cg1 protein, putative
translation: MLIYLVLSLNILVCLCILNTKYQIQLDYTVPSGLLNIPNNKKYTNITIGNDSFICILTKANNDNSENVCDLNNFFFNNLKSNDINNYVQNTLKKNYLLEYANNRLNYVTDPTSPNEVSIDSVLDPTTDLSNSESDIKDAENKRDPFVKQNHITNEKTEDSEYKYNDKHVTKNNTQNENNDVSTFYYKKKYEQKGINISDILKCRFEKLYDYIFYKHKINVYHKNRTYENINNNTAVKNHIIKGKMLSINNLCIEIFSYHQNILKLCINKYIIFMANNNLNKFKQHKSTSPHLNDNDLLFSNNTVVQYYTDGEYMFEVLYLCGNNNLKVDSFSKLDKIYYPLIFRIYIHTNTNLSKLYNIILKKLENEIYFFKTFNQYTYSNMYYKTLKDKLNQIINSKYTNIKHIYRITLSAYMFCNYTDKINPPNHFLLRNVINKCYTFIKNDDYVYEVCLPNSVIKYKKTEYGNIEYPIIPLGLSSVSTNEGIPFYEKSYDNFPVLKTDYNLSKENYYYMKMEEMNKIYRNYIKSKIQKSSKNIKNSTNRENITRTSSQTLKDPFFSTPLNNKSDNLISHTSFYDYFFYKLFSNNYYSELNNAHYISTYMVDKPYETLKTDTEYFYKVLAMDLKGGKCKTSLDEIYDHITTIYFVCSLHYNNESHTKVVEIYTTTECHYYVHIASPYFCAHPTLHTAIKAQKHAIKCFKNSNAASSRIQNNNTLYNYSNHYKRTDNQHKDINYEKTISNNLKNNNNTYQDLLSNYNYVTNSNNIYSYVNHNKNNNFVFLEALPKDKQIEFGKNYDFGLGNYIRNRVYKNNPIFHIGNIVKHIYWNYHGVIISWDYICFAPNNWKKKLFLEYPTKYQNSVYYLILVSTNKEETKDNSLETNKLLNEKKNNSRDHNFNIQSGEMKNEDLKSYQHNDEELYFAYVPESSLVYSDQKVYNKYLHQFFERYNDFFHFYIPKKNHILWKLFPYDFFSLI
SIO_010081: PCHAS_1220300
subclass of: SO_0000673
so part of: PCHAS_1220300
location: 726455..729382
location: region:726455-729382:1
so has part: feature:726455-729382:1:exon

XP_016654253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:726455-729382:1:exon

PCHAS_1220400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1220400
old locus tag: PCHAS_122040
so part of: sequence
location: complement(<729868..>730611)
location: region:729868-730611:-1
so has part: feature:729868-730611:-1:exon
subclass of: SO_0000010

3494592
type: Gene
SIO_000068: ncbigene

position:729868:-1
position: 729868
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:730611:-1
position: 730611
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729868-730611:-1:exon

PCHAS_1220400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1220400
old locus tag: PCHAS_122040
product: glutaredoxin-like protein
transcript id: XM_736418.2
SIO_010081: PCHAS_1220400
subclass of: SO_0000673
so part of: PCHAS_1220400
location: complement(<729868..>730611)
location: region:729868-730611:-1
so has part: feature:729868-730611:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:729868-730611:-1:exon

PCHAS_1220400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1220400
old locus tag: PCHAS_122040
note: term=annotation;date=20110105;qualifier=removed_pro duct=Cg6 protein, putative;qualifier=added_product=glutaredoxin-like protein;qualifier=added_gene_name=glp3;curatorName=ucb@san ger.ac.uk; pfam_scan;Pfam:PF00462.20; E()=5.2E-12;score=45.7;query 161-225;description=Glutaredoxin; iprscan;InterPro:IPR002109 : Glutaredoxin;Pfam:PF00462; score=6.9E-12;query 161-225;description=Glutaredoxin; iprscan;InterPro:IPR002109 : Glutaredoxin;Prosite:PS51354; score=20.475;query 148-247;description=Glutaredoxin; iprscan;InterPro:IPR036249 : Thioredoxin-like superfamily;Superfamily:SSF52833; score=1.31E-25;query 148-245;description=Thioredoxin-like superfamily
codon start: 1
product: glutaredoxin-like protein
translation: MSKYKIASYMICCHGVFKFYLTYKRYILEQNLDKTNKFLSIKNNMLTFCERISNNTKEYNTVLVNSSTLNENNPTEYQTSFKENGKHNRQEETAFSSQEIVPTEKEDNTNNTKEENLDNNLCDMHNNEVDCKSMEPNEFNTELSQDDIDLIENILKKHKLVLFMKGTALNPFCKYSRLAINILKLNKAKEIYTVNILNDDMLKHSLKIYSKWPTFPQLYINGKFVGGIDKIQELHDNKQLQQMLQAM
SIO_010081: PCHAS_1220400
subclass of: SO_0000673
so part of: PCHAS_1220400
location: complement(729868..730611)
location: region:729868-730611:-1
so has part: feature:729868-730611:-1:exon

XP_741511.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:729868-730611:-1:exon

PCHAS_1220500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1220500
old locus tag: PCHAS_122050
so part of: sequence
location: complement(<731110..>738162)
location: region:731110-738162:-1
so has part: feature:731110-738162:-1:exon
subclass of: SO_0000010

3497446
type: Gene
SIO_000068: ncbigene

position:731110:-1
position: 731110
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:738162:-1
position: 738162
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731110-738162:-1:exon

PCHAS_1220500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1220500
old locus tag: PCHAS_122050
product: Cg2 protein, putative
transcript id: XM_016798895.1
SIO_010081: PCHAS_1220500
subclass of: SO_0000673
so part of: PCHAS_1220500
location: complement(<731110..>738162)
location: region:731110-738162:-1
so has part: feature:731110-738162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:731110-738162:-1:exon

PCHAS_1220500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1220500
old locus tag: PCHAS_122050
note: tmhmm; query 1-2351; ;query 565-708; ;query 542-564; ;query 709-731; ;query 1-541; ;query 732-2350; pfam_scan;Pfam:PF08638.7; E()=1.2E-13;score=50.8;query 16-208;description=Med14; iprscan;InterPro:IPR013947 : Mediator complex, subunit Med14;Pfam:PF08638; score=1.3E-13;query 16-208;description=Mediator complex, subunit Med14
codon start: 1
product: Cg2 protein, putative
translation: MMQQEEEDEYGEYKGVSYSLIIKKVLKRSINDWNVFCEMVENDNGNNYDFLISALIQYCRHMRECYLKILELEKYREMHKDIIEVIKNILHLKQSYNELKTKYEYDIYLCKLKTLNLQLNQSNVLCALDLLATKKYTRFPLLFKQILKAPFDPVVLELNKYQIQILKKKLIDEFLINYYVSKIPKEKVNFKFSQGLVELEIINQVKIKFITDFLTCTIIDVNILFLNDMNLHISHNYNLLVLINYAIMKRRINQTNNTIGEGNVSNHNEIIENEHNYVKDPKAEDLKNNTNLPDTTSAYYSECSESESETYESSLSDCENNMELPLNNTHKQISDQIYRSKKTRQIGNIESYYKNINNKGKEKELELSDIYYEIYKTSNFYCNTQILEFLKAYLNQYNSFNYIKKQFQIYKKYKKTDKIEFTPSCYNYHIDDSNCLLYLDIYLYDIEFRKELYNFFEKYKVPILNENSEKKVILQFILNNKNGNVKIKLWPFDYFNKLNKKKKEEIQFDNILSYSEFIMCSFLKKKIKTICSYNPLYIHLENWVSKVSTCLTYFLFSILKIFCIKTTKIAIKQNTTIQNRYKAKLIKHDHAQTSEHSYLENIITHHELIADYFFDINTIEKNLQCIEISKLGKKTSSIFHIEEMNTNVYEDTDEGDNICLENKFEIVEVEKNKNDEILYILRYTFYGQKIDLFMNKQSDKYIFKCHWDNIFLNVISLGYNLKIIIYIIYLLNYYSKYIYLYNLLKEKFNNNLKPGKNIPFELNISNLYPNLLFSKLKLHEFLKKYDYSSNIVLTNFIEQFFEHINFFYYLSSESCDKTKGVDAELEEHIKKAIHEDAQKGGEENDENKGKHRNNFFSTFYFKFYLTGSDAPFLLCVFVENNFIFHTSIVVSFGNSYEGEDKNLDKKKKTNEESQKGPSKKGVNNYFIIPLIHKKCSIDNDVDCYLNGLNKMVMSFSNMLLSIQKILQVNFYCPVLCPCNFGPESMSNENDTTENFEEELLQSQENDDNIFGYSDDEIYKRNKKKWKNRSIDLEHFINRISDEEEVDEQSDHIKNSMLQFYCQLNDEYDINKEYITNHRNNNKFMFIIKMSIHGSFFFKIPIKKQKKYIKIDSFHKMENKKLITLFYGNIIVNMKIENLEIDDREGFVNLSEEWGEEDGQAENTNYDKKESGENDENDEKQPSDEPNKQIEFLNNTIKDWGLLKEIHIILNGKNSVPKILDIFSIIIKSMFVINFFTELYYIEKVIAPTFIIRNSHLANIDIMYLCRYDSNIVCSIFFDIFGGRDKDKSNADEGSLKHSKQNKTNQDIGQNKNIENHLENGDLFEYSDILNKYENYNSNDDEKNEKQNNSINKNYEKILKSLLFINICFNSSNEYINKIYLGEKENFNIYLKKKKNIFDLLKLISLTFEFHLNLHILINKTNNYLNKEYFLSHVVTTNLFEIYYINLMTVILQFKKENGTSIDTNRSNNNIYDEKKNANIDELSFYIILHPDNFSKIVLVPHFSNHFPNKNENSNFIINNFFKKNEIFSELSKTKTTDMFADADNTSSVFNKNITTSNYAQTNNISNQNENNLLSVPPDQVSNQLPNEIDKEKNNSFADYKNCSHIIIDNLNVEDLFVFLFLKFCKIINFQNDQHSDESHDYTFNQTQDKTTSINFKDFESNYKKYKTYNTSYDSISNDAFEKELESFEEYDTFINNIKYVFKLKNNIIISQIDFFRPTFLYATLYTLLEFIVSLKKWLIMFDHLKLEYENFTLSQSNLPNVFQYMSATKRQSANHEISQGETKDTNNDIYIHFVWFIYNIKTLHLEKLENKDEQNNKRYYGYFHSDNKGGTNINQTNNSTEFESRKIKKLKIEEIENLEDAPNEENLKNKEENFIENEIKSNKSSEIMININKRQEEKKNILHMLNDRINIGEINTDKLYHMINAYSYNNNDIFLKKNEKSKKKIIKKDFIEKVYLFQKLRLKKWDDENMELKNFDDKLKNENDDTNLENKNYKHNNMKT…
SIO_010081: PCHAS_1220500
subclass of: SO_0000673
so part of: PCHAS_1220500
location: complement(731110..738162)
location: region:731110-738162:-1
so has part: feature:731110-738162:-1:exon

XP_016654254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:731110-738162:-1:exon

PCHAS_1220600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1220600
old locus tag: PCHAS_122060
so part of: sequence
location: complement(<739409..>742841)
location: region:739409-742841:-1
so has part: feature:739409-742841:-1:exon
subclass of: SO_0000010

3498072
type: Gene
SIO_000068: ncbigene

position:739409:-1
position: 739409
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:742841:-1
position: 742841
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:739409-742841:-1:exon

PCHAS_1220600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1220600
old locus tag: PCHAS_122060
product: Cg7 protein, putative
transcript id: XM_016798896.1
SIO_010081: PCHAS_1220600
subclass of: SO_0000673
so part of: PCHAS_1220600
location: complement(join(<739409..741040,741147..>742841))
location: region:739409-742841:-1
so has part: feature:741147-742841:-1:exon
so has part: feature:739409-741040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:741147-742841:-1:exon

position:741147:-1
position: 741147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:739409-741040:-1:exon

position:741040:-1
position: 741040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1220600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1220600
old locus tag: PCHAS_122060
codon start: 1
product: Cg7 protein, putative
translation: MDADEVVCVHMNLKFLIFKNIEKNEDNYLCNDFIIDLADVEDIESSNISKGYFIKKFHEFLKKKKKNEYECVINGTITEVANFFFQNIELFIKIKKIQYELEDKNCEPNKYDNNREGTNTDYTFVNKDFGINKNIINLIKSADMQNDFNFENNDNIYFKCLFKDLINNFEFIENKQYENISNFYISNNLIFSINLKFEEYSINKKYIESTKKTNWLDNSYLPRYPKTVHNMNNNIYTEKTENKINHILNIFNFKNIYFLYINFDQYKKEFFIDNDVEVSVGNIVHSITPNSSINENDQEELNNQLDDNHDTAHINNDRFSDHMDNKNSVGCHFSLIFVDKIKEINDYFLINDIFVYVNKMQLEVDKRSLLQNNNDNENYINKKKEAWENYSDFRQISYDLITSSNSMPNLKFKATIISFPLYSNYSNAKSDSDDNYNFTNIQHDMATSDSHDIMSYNKIPQIDEDNNQIYSFGRGHKNDEKYFGINNRTNNITGNLGLPITLDKNDNKIFCNIFLSAINCHILELSNIYAEKNKNKQNNFFIKMESNIMGSSFVSPLYIFEENKKIELKNCHLDCDVELKESELLSYFENKKILFELSIKEQDNNINIGKGEFNIKNVVKELKEALENENSKGYYKQKLNISLYLNVFKEKYLTSEINAEIYFSIKEKKEKMAEKMMENRLGVYENVIHNPVLNEWNSETGNIPSNIYEFKLWKEREEKLMKEILKKKENNLIKKFTKKYEQMEKERKNEFEIKKNKVKEIIIKMKEDEINILNSRNELKLKDQELNSEISNIENKLKQIKIAYEKSLSNFKKSIRHNNLSSSILEENNTLKTSYKKLKNDIKNLKKENDHMKEMLSKYNNKDNTIISNKYFQELKEAKNEDKTEDGKNQHTSQIENYIKNIKKNRKHMLKLLTNFVLNFEYIYDQTCNEKLEDNFHSLLKIVNQLKTIINKEIKSDQILVSDFENTMENESDSYLKTNVEQDKTKQIENDGNKLEKDKGVINKYYNKTNYFTELKKKETFYDSNDDENQNSNYKFTKLIPKREKKNNDEIKPNVVEDSNPIVNVNKAKIAENLKSEINRLIQNGIYNENDQIIINMKKKLNSLILDT
SIO_010081: PCHAS_1220600
subclass of: SO_0000673
so part of: PCHAS_1220600
location: complement(join(739409..741040,741147..742841))
location: region:739409-742841:-1
so has part: feature:741147-742841:-1:exon
so has part: feature:739409-741040:-1:exon

XP_016654255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:741147-742841:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:739409-741040:-1:exon

PCHAS_1220700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1220700
old locus tag: PCHAS_122070
so part of: sequence
location: <744132..>744694
location: region:744132-744694:1
so has part: feature:744132-744694:1:exon
subclass of: SO_0000010

3498073
type: Gene
SIO_000068: ncbigene

position:744132:1
position: 744132
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:744694:1
position: 744694
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744132-744694:1:exon

PCHAS_1220700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1220700
old locus tag: PCHAS_122070
product: conserved Plasmodium protein, unknown function
transcript id: XM_739860.2
SIO_010081: PCHAS_1220700
subclass of: SO_0000673
so part of: PCHAS_1220700
location: join(<744132..744375,744486..>744694)
location: region:744132-744694:1
so has part: feature:744132-744375:1:exon
so has part: feature:744486-744694:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:744132-744375:1:exon

position:744375:1
position: 744375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744486-744694:1:exon

position:744486:1
position: 744486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCHAS_1220700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1220700
old locus tag: PCHAS_122070
note: pfam_scan;Pfam:PF08661.7; E()=1.7E-5;score=24.9;query 47-137;description=Rep_fac-A_3; iprscan;InterPro:IPR013970 : Replication factor A protein 3;Pfam:PF08661; score=2.0E-5;query 47-137;description=Replication factor A protein 3; iprscan;InterPro:IPR012340 : Nucleic acid-binding, OB-fold;Superfamily:SSF50249; score=2.74E-8;query 47-137;description=Nucleic acid-binding, OB-fold
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MNDNYFMDSTHYNDQIHDDEGNNTLEKYDENLNNKNDIFLQNKVGRLISEKYLSEFIDEDIFFIGEIINQHEDIITLKSVNGNCVECIIKDSNFQAQSKYIGVKGIVSNNLKVLETRGIVFLDDVNFEIVNDYIDISIKNANSDVFLCSY
SIO_010081: PCHAS_1220700
subclass of: SO_0000673
so part of: PCHAS_1220700
location: join(744132..744375,744486..744694)
location: region:744132-744694:1
so has part: feature:744132-744375:1:exon
so has part: feature:744486-744694:1:exon

XP_744953.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:744132-744375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744486-744694:1:exon

PCHAS_1220800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1220800
old locus tag: PCHAS_122080
so part of: sequence
location: complement(<745225..>748744)
location: region:745225-748744:-1
so has part: feature:745225-748744:-1:exon
subclass of: SO_0000010

3492083
type: Gene
SIO_000068: ncbigene

position:745225:-1
position: 745225
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:748744:-1
position: 748744
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745225-748744:-1:exon

PCHAS_1220800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1220800
old locus tag: PCHAS_122080
product: ribonucleases P/MRP protein subunit POP1, putative
transcript id: XM_016798897.1
SIO_010081: PCHAS_1220800
subclass of: SO_0000673
so part of: PCHAS_1220800
location: complement(join(<745225..745268,745362..745454,745607..746005,746125..>748744))
location: region:745225-748744:-1
so has part: feature:746125-748744:-1:exon
so has part: feature:745607-746005:-1:exon
so has part: feature:745362-745454:-1:exon
so has part: feature:745225-745268:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:746125-748744:-1:exon

position:746125:-1
position: 746125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:745607-746005:-1:exon

position:745607:-1
position: 745607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746005:-1
position: 746005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:745362-745454:-1:exon

position:745362:-1
position: 745362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745454:-1
position: 745454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:745225-745268:-1:exon

position:745268:-1
position: 745268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1220800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1220800
old locus tag: PCHAS_122080
note: term=annotation;date=20140327;qualifier=removed_pro duct=ribonucleases p/mrp protein subunit, putative;qualifier=added_product=ribonucleases p/mrp protein subunit pop1, putative;qualifier=added_gene_name=pop1;curatorName=ucb@sa nger.ac.uk; ;query 1031-1031;GPI_cleavage_site_score=1.1019999; pfam_scan;Pfam:PF08170.8; E()=1.2E-16;score=60.8;query 683-774;description=POPLD; pfam_scan;Pfam:PF06978.7; E()=3.3E-7;score=30.4;query 89-145;description=POP1; pfam_scan;Pfam:PF06978.7; E()=4.7E-17;score=62.6;query 137-226;description=POP1; iprscan;InterPro:IPR009723 : Ribonuclease P/MRP, POP1;Pfam:PF06978; score=2.6E-17;query 159-226;description=Pop1, N-terminal; iprscan;InterPro:IPR009723 : Ribonuclease P/MRP, POP1;Pfam:PF06978; score=4.5E-7;query 86-146;description=Pop1, N-terminal; iprscan;InterPro:IPR012590 : POPLD;Pfam:PF08170; score=4.5E-17;query 683-774;description=POPLD domain
codon start: 1
product: ribonucleases P/MRP protein subunit POP1, putative
translation: MGSPINVKNNGTIYLSKKGSDEKGIKNNGNNKLAEMNNNNNNNEKIYKPLQDISTNSEIKSFNQNVILWSSSFFSLKEDDLQIFGNELKKRNIFKRCFQRIHKNKRRRCMSFNPYRVPLSCKKVTFDEMLISEPKIMKKKKKKKKIYNNPNMPHDYFYKKYILRAKKKNWLETHLYHSKKFKMIDIYGYKLALKNCDKISRRIFRYQKRKSLIHDMSYVEVVQLSGNENDIIHILKKITNVEQANMLKDKYLLGILLGKLFIYKYDNAQEKQTYENNNTKAYQPDQEENNNFFNAKNCLICPAYFLWRSKEEKTASSKKGKKRNNINIASQINEYKNDEIEKMENENKGDSLRDLWIFIHPVCLKEIIENFENVISCEINRISHKVNIKHIKNICMYELIGPNSFNLLVNILKVKSKYIMKEKKDIYHYKYEHITLPNDFVIPMYAILPKTIGPFLLNYKINENLSGKLVENIDKQTNIDSNKIDEKVVRGSIHNQNSPCLNALNYLREKNKKGNKFLLKANNFSPYDNNILMNEKIKQNVIKTFKINKYEHVRSRKKQKVRLAILKMLSKNKNIAPYDVIKEKKQSNTFLRFVNEVDINIKNERKNNSIFDNNILDNYVDNFLNECKKDETDKNNRNVKQSEQDEILTELQKTKEQIKNNSQKYIKIPILIINKSDNNNKRFFILCPAKKKSSVLFHLLVRNGSIAIGLKEREKIFKCLDFLCYPKDFPDSVGGIFYNNLREELSKKKHFKKPINKRINYYCLGINNPFNYSWISIYPYTNNNIKIIRVTDSYNIFLIKTFLNRFISISLNKLNNINDLESFYTFMEDIKSKFYVLSNYFISVYVYAYKEGTPKRLSHICSMSLKMLIKFFTQYPNTKKIQKWLVHKKIEVKKIYNSKKIEKPKEPVISRYKNRVVKKRELKKNANNKTNNKADISYILQTEDNQSDSQTCENNNEEIILASKKIIGFVSSGGHVLSKGYGYGVAHISFYLFLENILYHIFVLKLITSNEIKANQNGTDFTCLALMRNINSSHYYHVWLSLVPEDKYLPF
SIO_010081: PCHAS_1220800
subclass of: SO_0000673
so part of: PCHAS_1220800
location: complement(join(745225..745268,745362..745454,745607..746005,746125..748744))
location: region:745225-748744:-1
so has part: feature:746125-748744:-1:exon
so has part: feature:745607-746005:-1:exon
so has part: feature:745362-745454:-1:exon
so has part: feature:745225-745268:-1:exon

XP_016654256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:746125-748744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745607-746005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:745362-745454:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:745225-745268:-1:exon

PCHAS_1220900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1220900
old locus tag: PCHAS_122090
so part of: sequence
location: complement(<750623..>752581)
location: region:750623-752581:-1
so has part: feature:750623-752581:-1:exon
subclass of: SO_0000010

3487312
type: Gene
SIO_000068: ncbigene

position:750623:-1
position: 750623
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:752581:-1
position: 752581
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750623-752581:-1:exon

PCHAS_1220900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1220900
old locus tag: PCHAS_122090
product: lysophospholipase, putative
transcript id: XM_729240.2
SIO_010081: PCHAS_1220900
subclass of: SO_0000673
so part of: PCHAS_1220900
location: complement(<750623..>752581)
location: region:750623-752581:-1
so has part: feature:750623-752581:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:750623-752581:-1:exon

PCHAS_1220900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1220900
old locus tag: PCHAS_122090
note: pfam_scan;Pfam:PF12146.4; E()=7.9E-20;score=71.0;query 221-396;description=Hydrolase_4; pfam_scan;Pfam:PF12146.4; E()=2.0E-8;score=33.7;query 98-146;description=Hydrolase_4; iprscan;InterPro:IPR006494 : Plasmodium subtelomeric PST-A;TIGR_TIGRFAMS:TIGR01607; score=7.6E-67;query 205-410;description=Plasmodium subtelomeric PST-A; iprscan;InterPro:IPR029058 : Alpha/Beta hydrolase fold;Superfamily:SSF53474; score=5.13E-30;query 29-412;description=Alpha/Beta hydrolase fold; iprscan;InterPro:IPR022742 : Putative lysophospholipase;Pfam:PF12146; score=2.2E-8;query 98-146;description=Serine aminopeptidase, S33; iprscan;InterPro:IPR022742 : Putative lysophospholipase;Pfam:PF12146; score=1.0E-19;query 221-396;description=Serine aminopeptidase, S33
codon start: 1
product: lysophospholipase, putative
translation: MELSQEEAQSVQPILRSGNKDPSIMGDPDIGFFTNKHGLKIKTLKWLVKAPVGIVFLVHSLNSHCRFDYLKHNVTIPNNDKAILNDGENFYVHKDSWIEELNKNGYSVYGLDLQGHGESECYKNKKTYINEFDDFADDILQYMNGVHESIVNEAAKDNQENDNNAIGQKKRCTKCDLILKDESDICCSNEDKIIANGLYLRHPEKNQYKKPDYNIDPYKTPIPMYLVGLSMGGNIVLRILELLSQRRYKYYNRLNIKGACSLSGMLSAKDVRKKPSWKYFYIPLMKLSSVFFPKSRFAPNTTYEAFPFLKDLYGYDKIFYDKPITNKFVCKLLEAADNLNKDADKVVKDVPILIVHSANDQKCSHDSAQEFYNNLKTKKKEFHTLDDMEHMITMEPGNEQVIKKLVDWMAGTQKETPKKKKVKKNLRSADDKSAASSEASPTQSTSALTDLPKDKATQDQVSQEQPAEEQATEEQPVEEQPIEEQPVEEQPIEEQPVEEQATEDQSAEEQDTQEQPTEEHDTQEQPAEEHDTQEQPTEEHDTQEHPAEEHDTQEQPTEEHDTQEHPAEEQDTQEQPAEEQDAQDQSAEEQDIQEQPAEEQDIQEQPAEEQAIQDQSVEEQAAEEQAAEEQAAQDQAAQEQPDEEQALENEAA
SIO_010081: PCHAS_1220900
subclass of: SO_0000673
so part of: PCHAS_1220900
location: complement(750623..752581)
location: region:750623-752581:-1
so has part: feature:750623-752581:-1:exon

XP_734333.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:750623-752581:-1:exon

PCHAS_1221000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1221000
old locus tag: PCHAS_122100
so part of: sequence
location: complement(<754788..>755921)
location: region:754788-755921:-1
so has part: feature:754788-755921:-1:exon
subclass of: SO_0000010

3495452
type: Gene
SIO_000068: ncbigene

position:754788:-1
position: 754788
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:755921:-1
position: 755921
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754788-755921:-1:exon

PCHAS_1221000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1221000
old locus tag: PCHAS_122100
product: prodrug activation and resistance esterase, putative
transcript id: XM_737268.2
SIO_010081: PCHAS_1221000
subclass of: SO_0000673
so part of: PCHAS_1221000
location: complement(<754788..>755921)
location: region:754788-755921:-1
so has part: feature:754788-755921:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:754788-755921:-1:exon

PCHAS_1221000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1221000
old locus tag: PCHAS_122100
note: term=annotation;date=20170123;qualifier=removed_pro duct=lysophospholipase, putative;qualifier=added_product=prodrug activation and resistance esterase, putative;qualifier=added_gene_name=pare;qualifier=added_li terature=pmid:28106035;qualifier=added_GO:0005737;qualifie r=added_GO:0043493;qualifier=addedd_GO:0016788;curatorName =ucb@sanger.ac.uk; pfam_scan;Pfam:PF12146.4; E()=9.5E-8;score=31.4;query 101-150;description=Hydrolase_4; pfam_scan;Pfam:PF12146.4; E()=2.1E-18;score=66.3;query 181-357;description=Hydrolase_4; iprscan;InterPro:IPR029058 : Alpha/Beta hydrolase fold;Superfamily:SSF53474; score=2.77E-30;query 34-371;description=Alpha/Beta hydrolase fold; iprscan;InterPro:IPR006494 : Plasmodium subtelomeric PST-A;TIGR_TIGRFAMS:TIGR01607; score=1.4E-128;query 35-372;description=Plasmodium subtelomeric PST-A; iprscan;InterPro:IPR022742 : Putative lysophospholipase;Pfam:PF12146; score=3.7E-18;query 181-357;description=Serine aminopeptidase, S33; iprscan;InterPro:IPR022742 : Putative lysophospholipase;Pfam:PF12146; score=1.0E-7;query 101-150;description=Serine aminopeptidase, S33
codon start: 1
product: prodrug activation and resistance esterase, putative
translation: MAADQSRENDKQKGGNSSGGNKKNEKLDGRPKIDTFNNKNGLAIKTYAWEVKNPVAILFVIHGLSGNARFDYLRHNITLVGYEKAILNDADNFYIYKGSWIEEFNKKGISVYGLDLQGHGLSEGWENLIKHVREFDDLVYDVLQFINRVHDTLCLEKYKSNLNSGDNTNSLHNNIINTKLPPFYIMGQSMGGNITLRLLETIGKSKDITPNNNKINIRGAISLAGMISIDEILKKPSYKYFYIPFAKVLATVFPSLRVVPPLEFKKFPYINNIYEYDKNVSLRPATCKLAYELLRAIQNLNNDISYLPKDVPLLFVHSREDSACFFNGVQTFFNNVKSNNKELFALDDMDHILTMEPGNERILKKVTEWILNLSASS
SIO_010081: PCHAS_1221000
subclass of: SO_0000673
so part of: PCHAS_1221000
location: complement(754788..755921)
location: region:754788-755921:-1
so has part: feature:754788-755921:-1:exon

XP_742361.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:754788-755921:-1:exon

PCHAS_1221100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1221100
old locus tag: PCHAS_122110
so part of: sequence
location: <757028..>757225
location: region:757028-757225:1
so has part: feature:757028-757225:1:exon
subclass of: SO_0000010

3495454
type: Gene
SIO_000068: ncbigene

position:757028:1
position: 757028
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:757225:1
position: 757225
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757028-757225:1:exon

PCHAS_1221100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1221100
old locus tag: PCHAS_122110
product: conserved protein, unknown function
transcript id: XM_737269.2
SIO_010081: PCHAS_1221100
subclass of: SO_0000673
so part of: PCHAS_1221100
location: <757028..>757225
location: region:757028-757225:1
so has part: feature:757028-757225:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:757028-757225:1:exon

PCHAS_1221100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1221100
old locus tag: PCHAS_122110
note: term=annotation;date=20150130;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk; ;query 33-65; ;query 10-32; ;query 1-9; tmhmm; query 1-66; pfam_scan;Pfam:PF14990.2; E()=2.2E-21;score=75.2;query 1-45;description=DUF4516; iprscan;InterPro:IPR027858 : Protein of unknown function DUF4516;Pfam:PF14990; score=2.3E-21;query 1-45;description=Protein of unknown function DUF4516
codon start: 1
product: conserved protein, unknown function
translation: MPLGVPMRKYLFIVSTSFICMAMGSCCVHLIMKPEMKEYDLSKHLNDRNKAIEQVQNEILKRKMS
SIO_010081: PCHAS_1221100
subclass of: SO_0000673
so part of: PCHAS_1221100
location: 757028..757225
location: region:757028-757225:1
so has part: feature:757028-757225:1:exon

XP_742362.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:757028-757225:1:exon

PCHAS_1221200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1221200
old locus tag: PCHAS_122120
so part of: sequence
location: complement(<758192..>764113)
location: region:758192-764113:-1
so has part: feature:758192-764113:-1:exon
subclass of: SO_0000010

3494250
type: Gene
SIO_000068: ncbigene

position:758192:-1
position: 758192
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:764113:-1
position: 764113
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758192-764113:-1:exon

PCHAS_1221200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1221200
old locus tag: PCHAS_122120
product: conserved protein, unknown function
transcript id: XM_016798898.1
SIO_010081: PCHAS_1221200
subclass of: SO_0000673
so part of: PCHAS_1221200
location: complement(join(<758192..759261,759420..761546,761629..>764113))
location: region:758192-764113:-1
so has part: feature:761629-764113:-1:exon
so has part: feature:759420-761546:-1:exon
so has part: feature:758192-759261:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:761629-764113:-1:exon

position:761629:-1
position: 761629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:759420-761546:-1:exon

position:759420:-1
position: 759420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761546:-1
position: 761546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:758192-759261:-1:exon

position:759261:-1
position: 759261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1221200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1221200
old locus tag: PCHAS_122120
note: term=annotation;date=20161031;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk; ;query 479-529; ;query 585-620; ;query 456-478; ;query 530-552; ;query 562-584; ;query 621-640; ;query 1-455; ;query 553-561; ;query 641-1893; tmhmm; query 1-1894; pfam_scan;Pfam:PF05990.8; E()=4.4E-20;score=72.0;query 1463-1646;description=DUF900; iprscan;InterPro:IPR029058 : Alpha/Beta hydrolase fold;Superfamily:SSF53474; score=4.97E-8;query 1434-1557;description=Alpha/Beta hydrolase fold; iprscan;InterPro:IPR010297 : Protein of unknown function DUF900, hydrolase-like;Pfam:PF05990; score=4.6E-20;query 1463-1646;description=Protein of unknown function DUF900, hydrolase-like
codon start: 1
product: conserved protein, unknown function
translation: MNVRKKLVCYSKLEKENYKKKNIYNILLKDGINYIENEHNETIKNDDYVRTLFFEYEQSNDEKLIHKNDNQKKELEKTSSFKSNYNQNLINYTNFVQKDKPSFSHTKQLEKQNSFLNKRNNYLLFFMGYKNKRKKRKKKQNEKFVKYRILNRSIEKQKNSKKGKQNRDAIPLKYFCKHVIDYHIRREEVDTLLRKKPSKKFVCESSIARPCGNANSSSQLKSESDQISKKERNSSQNNEYFMFQNINELLCGANTATNLEKNQNDNCRDEKKIIKNIFTTPTEGIDKIQFSSQLKEECGEPPKSKKNNFSVEKENRHNLKKLGKENNKSKTIFNYEETDIKRRSNKHLETQFSMSSVQNNSHFSGNEVGKKRKTSESLKKTKKGIEDSTLNDDIPSINEKGITKLDSKSCKKKCNFKTQNEMNKIGNHKGYGLHNDVRGFEETLKFMKYRELLRKYMGTFYNYSSLKCASYIILYAVITKIIIQISKNLTSGYIFNEPGIDGYDDSYNNGGNILGNNNIFFLLNIYDLNSVIQSICYGVLLICIVLLIKLGIPSNYLLAGRLTILFMFLFLIQIPIIIYSNFLFLKKKENDLLDSSPKIYDKKNYFNLQLQKIYNTFYVDIINLLLYTILISAVSLYATYNKLIYPHLLKLYLDTFFLNSYSIIKKEIIHFRVPNNIDAYYLNKMNSYLFNTLYKKQDTIKHEDIESNTKSAIGYNVVIKKEKCSFFFTNFFRKKKQTYKKKIKNKIKGIDMNFYIIFYIGELDRKGRPHGFGYWRGIHSEGEVLIGYWYHGIPVGPFKCRDLKTGSGFMCIKIGYGRTSCEPNDLTIGLADTECCVSGAFYRTFPRVVFYNLNLTLQNNKKKTNRKKNLDKKPNYSKHGVVEKRECCEYLIVEKASNDILRINYSKIANNAYSEENPECSDADLTNDLNSKYQKNGHTKVTDTELRTSSMIDSEIYLKGKCIDYDGLYNLSYDINELTLDEPILNELENGFHHNVEPIESDSNKMENVLNEQLDVDRKLEPTQVLNTIEKESPYYRNEYKLDHLCIIRNNLESHKDDDLDCNNFDGLRSCKYNENSLEISKSGDSKKENEITFESGCIRNGNTLDERKSEKHVKRDSINLKNRKKKIIMNDIKHGAIRIPVESTSMSVETRKKKRNARNKSNLENKVNSLHAISEKQTDKVGTKKIKKIKSNDHILSSISNDKTGEKEKKRGSNGGIRFGKSKEVENKDINNRHEKKINFKTSREFVKKTSNKQIKRKVKKRIGYSMKRTIYRLKNFKFIKSYNNSNASDNNPIKNEIKKNKKLWIMGNKKLFIPKTFSGTLPKLRIKKKKYQSLLFSEYITNVYKTKCMNIILQNLCPHMPNFGITYNTDLHISIDAERGLYITGYINKKKSTYPMIRDKKRKTDDLEDNEVKIKIIKKTKNENIVNNKKNFNKRLYSWIDNIKELSLEGWVRCELAGSLEAVIFIHGYNTSHLEALQILGQMASFGNFPNYIKLFLFNWPSGKNMLEFFIARENSKNKEIHHAFKSFLDTLRNNGIKQIHIITHSMGTRMFLLAFHDIVKGGLFSTIDEEDNVENNQNKMKLITLTMMNPEYSLNDFVNKEYIFLRSYCTVISIYCDSNDKALKWAEIFSGTKSLGKNVFDLNVSKNNFSKWSISSSENNVFDSNKLDCYSIQIDNKKNKKGIKNDNINYKHSSSHFDWENCEMASENQKNTITICVKNSMNKFLNLIRLSYLKPTKVKIKKDTYSSSISVDNDYVDHTAKYNTDYKSSFEGNQNKQNNLHIKTNLHHQPPMFRNTLLVFTGIEPNYCYRDNRDWLDVDVIDTTWLGSNVHTLRHSYWSLNREIIEDIRELIVTRKRARQRTSRLDRREGNVWVYRVAPSHLKSIFDSDI
SIO_010081: PCHAS_1221200
subclass of: SO_0000673
so part of: PCHAS_1221200
location: complement(join(758192..759261,759420..761546,761629..764113))
location: region:758192-764113:-1
so has part: feature:761629-764113:-1:exon
so has part: feature:759420-761546:-1:exon
so has part: feature:758192-759261:-1:exon

XP_016654257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:761629-764113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:759420-761546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:758192-759261:-1:exon

PCHAS_1221300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1221300
old locus tag: PCHAS_122130
so part of: sequence
location: complement(<766081..>775797)
location: region:766081-775797:-1
so has part: feature:766081-775797:-1:exon
subclass of: SO_0000010

3498850
type: Gene
SIO_000068: ncbigene

position:766081:-1
position: 766081
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:775797:-1
position: 775797
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766081-775797:-1:exon

PCHAS_1221300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1221300
old locus tag: PCHAS_122130
product: conserved Plasmodium protein, unknown function
transcript id: XM_016798899.1
SIO_010081: PCHAS_1221300
subclass of: SO_0000673
so part of: PCHAS_1221300
location: complement(join(<766081..770697,770792..771023,771150..771877,772013..772157,772249..772376,772461..773189,773293..>775797))
location: region:766081-775797:-1
so has part: feature:773293-775797:-1:exon
so has part: feature:772461-773189:-1:exon
so has part: feature:772249-772376:-1:exon
so has part: feature:772013-772157:-1:exon
so has part: feature:771150-771877:-1:exon
so has part: feature:770792-771023:-1:exon
so has part: feature:766081-770697:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:773293-775797:-1:exon

position:773293:-1
position: 773293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:772461-773189:-1:exon

position:772461:-1
position: 772461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773189:-1
position: 773189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:772249-772376:-1:exon

position:772249:-1
position: 772249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772376:-1
position: 772376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:772013-772157:-1:exon

position:772013:-1
position: 772013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772157:-1
position: 772157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:771150-771877:-1:exon

position:771150:-1
position: 771150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771877:-1
position: 771877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:770792-771023:-1:exon

position:770792:-1
position: 770792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771023:-1
position: 771023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:766081-770697:-1:exon

position:770697:-1
position: 770697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1221300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1221300
old locus tag: PCHAS_122130
note: query 2993-2993;GPI_cleavage_site_score=0.10399999; ;query 820-825; ;query 797-819; ;query 826-848; ;query 1-796; ;query 849-3027; tmhmm; query 1-3028
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MWDNNIDINDVIKEIIYRSADDCNFNNVELNFQSILKYFYDVTNKYNIKKNISDEIFNKLLIICKNIIEDKIKSDYPKPILDSGTKLCLNKNFQNDGNMSEEVCYYRSYDLISSVNKEMLEIDNIYNQKNKSIVESVDEVDEVGDGYLSNGGYSSYNTSDKFYSEKNNNVLKFTTLRKKEDEHNINTFHGDSKQNQLSILSIVMKNDERKKNKYYCKSVNELVDANYLSDRTSINNDYRDDRGKYFNNNTNEFENIGLLKINEKSFLHKNNRNLLKIYLNGETIHNIYKKITKYRHKNNDNFYVGKKNKMKIYNEANLFYTYIKLKKMFILWKNFMNKKKLANKNKIIFNKMCNKKVLIKYYDLWIYRFEKKVYLKHTYERLILKNESIIIRKLFNKWLNKYKKKKKKNFIYCLHIFREWKNFTKKSRSLRLSKNKLEKKKTKKIFTIWKNRYENKIIKKLKNKEIYNIYNKNLLIKCYVHLVLYYKKRKQENECHQVIYANWKICVCKKYFYLFLQAYNEELEFKIYYQKYINKIKTVLLKKYFSNLRKYTKKCKQLSLSLAKWENKKNKIIPHVYFLQWIDIYNENITIRNILKCMNERKKDYILKKYFTILKKHKEKTYHLKKLFIYIYEKKNKQDMEKIYNQWKNYYTLNSSKYIFLYNKYKYKIMIQSFSLLYKYKEYKKKRKAHISAMDNYFINNLKKNVITKWITYMKVYQRNILNYYNFNNEGNFLLLFMSKMLIKHKIVSKAVNNITVLDFLNFNNIDININSLIYAHKKYYSNKNIMQNPSYFYQNIPFVFKSINIVLSFVPVSFIVNLPKFKFSLPYFSFAIKMALYKILFTSWLLNCRSIKRFKRKVQENVVRKYFMSLLMFAKKKKKLEELKMQYKVDQKIMTKKKIFMKWLGLRIKYFKFRKKFDIYIYKSKENRMRKVLGGWYKITKENNKKKQNILNFFKKLLIKKKRKCFNSLIMNVKRKQEMKVKKEISNLFYMNKLKKKSFKSLYIFSKNMLYFNTLNKMSQNYLKGLCIIKWRNLTRQYLNQKEKYINILNYFYLKIQKKFFNILIVYTSLRQINKKKISHFKKIQEKIFFYKYMKHWKNYVEIKKNKKEFLQKIASHFNRKKKISILSKWYTTFITNIKLKEADQIFTRKVTIIYFGRLFLYAQKLKRIQLFIKNRQNVLTCQRMLKQWKGHTKREKKRRIFYENICNKRKEEYYILWCKMYDKVRKKKELGYILYKIRQINNMNKLNEYYTEWKIKYIQNKQIKTFIFIINKCVIDKIKLKIFKLLYKNYEYHLSISSLFNNFLLEKRNKIKKYVFNLLVYNKNTRIKNKTALHFYVRKIKTKAFHAFIKYKNKKLLYEKNTNILINRKKQLYFYTIINFYNLINKIKTNYFGLCKSIDSRIRREFFMRWLTFLRRRKKEQQNLIEFVKKREYKKKENIFFEIFRKSNKKKYIAIILKRVNHIFQTKMYQMGLYKFRMNRKHMIVQEKIYEKLAEKRKIKIMRRCVKALQKRVAKQKRKETEQEMITFFYNNMIKKIYFKKMIHASSQLLKNEYNIMQKIKLNNYFYFIRSYFIEWKLFVEKKKKYKKMENLIKLKKIAKIFFVFLYVRAKTTYKQILIIYKIFGLFNLSKELDTSQLLDFGYSLFSNVYIFKNNMEYVDRRSMTSNSSGSTSTQNNSTICSDATKDLVIDVESPLLDTCKSEEKEEREMIQQNENFNNSIMVKNRNSFFKNIKKYLGLNTIYSEMKKKDNLNINGNKIKIRNDYFSNFLNVCNVIKHSSINRLILNYLLMYNLYDINIFFNHYKKKFKSLYNYFFNLLSIKMKKALLKIFKKNDSYYYIKLMNSNEKQIQDNLKILLFIYYLFGNASLTFDENSSSLHNIQNIWLNINSVLNNSKDKQNSSDNNRMGIGSSDNLPVLNRLNEKKREYPSTILESKSVELIQRSSNSSSDCSSDFHLNYDNNYFAFDKCKSADGYTNFCVKNGMNMYRNESFIQNKNC…
SIO_010081: PCHAS_1221300
subclass of: SO_0000673
so part of: PCHAS_1221300
location: complement(join(766081..770697,770792..771023,771150..771877,772013..772157,772249..772376,772461..773189,773293..775797))
location: region:766081-775797:-1
so has part: feature:773293-775797:-1:exon
so has part: feature:772461-773189:-1:exon
so has part: feature:772249-772376:-1:exon
so has part: feature:772013-772157:-1:exon
so has part: feature:771150-771877:-1:exon
so has part: feature:770792-771023:-1:exon
so has part: feature:766081-770697:-1:exon

XP_016654258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:773293-775797:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:772461-773189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:772249-772376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772013-772157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:771150-771877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:770792-771023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:766081-770697:-1:exon

PCHAS_1221400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1221400
old locus tag: PCHAS_122140
so part of: sequence
location: <777262..>778626
location: region:777262-778626:1
so has part: feature:777262-778626:1:exon
subclass of: SO_0000010

3489272
type: Gene
SIO_000068: ncbigene

position:777262:1
position: 777262
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:778626:1
position: 778626
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777262-778626:1:exon

PCHAS_1221400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1221400
old locus tag: PCHAS_122140
product: conserved protein, unknown function
transcript id: XM_731177.2
SIO_010081: PCHAS_1221400
subclass of: SO_0000673
so part of: PCHAS_1221400
location: <777262..>778626
location: region:777262-778626:1
so has part: feature:777262-778626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:777262-778626:1:exon

PCHAS_1221400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1221400
old locus tag: PCHAS_122140
note: term=annotation;date=20180518;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk
codon start: 1
product: conserved protein, unknown function
translation: MNNVVLKNSFFCYIQNGKNIISKNQNNYSSLKFNNISKCGVHIKNNNPKLDYQSCLNSYTNFANKKKQRFYSTYRPATENYKTNAINQPSQISTFHNLPNEYKENKEIDYKNVDNFSNKNNNEHKFNIEEEEIQKGKKKSSKIKIVGYTFILIFGTYVSYKVYKNDFNLSKAEESILKDIFNIIYTYEEKGSVKNSKFITCLNEKLSKQIAMYFLQLDTDKKSGFIINDALLFLSELNINEDNEIVKKFIKNGNGKNTELKKYSGCSLQQFAELIESLILANKTKAHNDVLQNGDLNNLLENDPKKNYINIMQNYLDAFINTIKTSNLYLYYLNKKKDSQNEDILDNLETLILDKLTKYNDKYVDKKNLSLDYILSKEEMDRLRKNCVSNKKDEEKELLLIEKKNIEDKIKRLLDLQKKKKLTETEIKRLQDLKENLKNVKYTIKKEQIKRYFN
SIO_010081: PCHAS_1221400
subclass of: SO_0000673
so part of: PCHAS_1221400
location: 777262..778626
location: region:777262-778626:1
so has part: feature:777262-778626:1:exon

XP_736270.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:777262-778626:1:exon

PCHAS_1221500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1221500
old locus tag: PCHAS_122150
so part of: sequence
location: <780343..>785217
location: region:780343-785217:1
so has part: feature:780343-785217:1:exon
subclass of: SO_0000010

3487201
type: Gene
SIO_000068: ncbigene

position:780343:1
position: 780343
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:785217:1
position: 785217
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:780343-785217:1:exon

PCHAS_1221500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1221500
old locus tag: PCHAS_122150
product: conserved Plasmodium protein, unknown function
transcript id: XM_729131.2
SIO_010081: PCHAS_1221500
subclass of: SO_0000673
so part of: PCHAS_1221500
location: <780343..>785217
location: region:780343-785217:1
so has part: feature:780343-785217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:780343-785217:1:exon

PCHAS_1221500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1221500
old locus tag: PCHAS_122150
note: query 1606-1606;GPI_cleavage_site_score=0.43200004
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MDNTINKKEKIRTICKKINKLKKRFYSCTEYLKCVEVLFEKSGTKCINKIKKNDQSPNPEHNRNSSTTKDIFFTGFIKDLDFFNVKNLDIFFDKCCLVNNKYNDKKKDSNLNCNSAHKKQNGKKTKLKKKKKNGIKDLSNKGDNTNHKIVLESSPSSSSKYTRLNSKKPDENEKDSQAKNKINEMKNNDREINTESVYNQTMEISLDDLKNENIQCISKIISNDDSIQDNKRRETKLYDIDLCNNLSNKRRKLSEITVNMNEMYSELNNIQKQISTQFSFEEQPDLENDYEKKENYTKGEEDMEIYNKNKYIKKQNLILKISNIIFENIKDRKGEKMNETSLVLQNGMKTFNFLFENMQFNHDKKQNIDENIKKEYEYVANQIDAIVNTKMGEKKADKITNYQGDLQKCLMFFNNIFLKLSVHINTLFSTCIELLKWDFSQLSYSKTPESNNSLQVINLINKYRTHQEYVIHFSKYLLQICKIFISRNNSESVCSSGKYIKDIVSKKEIKTIKNLIKILNKWNKIDLNILLKLTQYKMENNTTTYQIKILNHDLVKYNFFLRKVDFLKYNNKIISSLKRICSLLFDEKLSKEINKNINEVENGSKNYDININNILNECNKFSKANGPSEINQDQLSGSSCSDSSSNSDADGNDFCSQLGEEEKLGHDVWKYEREVKSNEMKIITNLNKILTHEMNYHEFIRNATKKEVDGIANIYIYIKKIYNFLEKNNEKGSSIDLSSTQKEYLIINKFREYLLELSINKNSKEIYMANDTAYWLNKNDSIMNKDENCHINFSITNDFNLLKNYNIYNNNKVVKDKYSKDVFENFDQIKQNKYNNNLEETDGFKYIPYRNNNDIYNLANMIKSILSFILKCYIDNHAATHPDVYEENSKGHLYTYQEKLIVNLQENIKQMKKENTENAQKLEIEKNLVINLNEELEKKNQIIKEMELSLEKLTEENQELRVQVEKEKLVSDSAFEELAAEKGRSAELSDELEAEKEKCAKLGDELEAEKGRSAELSDELKAEKGRSAELSDELAAEKGRSAKLDDELETEKGRSIELAGELETEKGISVKLADELEAEKERITKVGDELEAEKEKCAKLGDELEAEKERSTKVADELEGEKEISTKLADELEAEKENIVKMADELEAEREKLVKVANELEAEKEKVVKVASELEAEREKLVKLADELEGEKKRCEEKENKIISQNKELEDMKRMRNDDKDKEGQKSVKDTFFSRLLKKYKKSSSNGDSNNEDSSGSENKITNKIAEYENMDEEEKGEYGNLYYSHIESVIKNDNLEKEYDKMIIDFNSRIENFNKKVDYFDEKIKYYKNICTNYEKKNIHINNCVDQLEELIIDADEKLDNTDIKIDIQNKIENLKNILKELKENYKVEMIETDSMLFDEILKEKNILLKKINNYKINNIDNEKSEELKKYMKDMNFKTINDLFIFHINSTEELNLLKDQLNKVMDECSGKDKELTILNENCKSLLLEVDNLKSILNDLFSYKENKPDTISIPGSVYSRNASNSVNNIAQNKTEIKNKDDLTNLEIPIDNTSDILSNINSEMLESSNFPLTSNDTSIPKENKKSPYKPKRQRTPKRASNPPISEGASENSPRRYQLRRSTRKK
SIO_010081: PCHAS_1221500
subclass of: SO_0000673
so part of: PCHAS_1221500
location: 780343..785217
location: region:780343-785217:1
so has part: feature:780343-785217:1:exon

XP_734224.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:780343-785217:1:exon

PCHAS_1221600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1221600
old locus tag: PCHAS_122160
so part of: sequence
location: complement(<785754..>786692)
location: region:785754-786692:-1
so has part: feature:785754-786692:-1:exon
subclass of: SO_0000010

3498534
type: Gene
SIO_000068: ncbigene

position:785754:-1
position: 785754
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:786692:-1
position: 786692
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785754-786692:-1:exon

PCHAS_1221600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1221600
old locus tag: PCHAS_122160
product: conserved protein, unknown function
transcript id: XM_740319.1
SIO_010081: PCHAS_1221600
subclass of: SO_0000673
so part of: PCHAS_1221600
location: complement(join(<785754..785933,786038..786206,786307..786477,786607..>786692))
location: region:785754-786692:-1
so has part: feature:786607-786692:-1:exon
so has part: feature:786307-786477:-1:exon
so has part: feature:786038-786206:-1:exon
so has part: feature:785754-785933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:786607-786692:-1:exon

position:786607:-1
position: 786607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:786307-786477:-1:exon

position:786307:-1
position: 786307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786477:-1
position: 786477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:786038-786206:-1:exon

position:786038:-1
position: 786038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786206:-1
position: 786206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:785754-785933:-1:exon

position:785933:-1
position: 785933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1221600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1221600
old locus tag: PCHAS_122160
note: term=annotation;date=20180918;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk; ;query 22-33; ;query 84-94; ;query 161-172; ;query 4-21; ;query 34-51; ;query 66-83; ;query 95-117; ;query 142-160; ;query 173-195; ;query 1-3; ;query 52-65; ;query 118-141; ;query 196-201; ;query 180-180;GPI_cleavage_site_score=0.48000002; tmhmm; query 1-202
codon start: 1
product: conserved protein, unknown function
translation: MYPFIIFLIIVVVVTILDVCPQIPKFYARKLTHMICGILILIFDIIVNERWNESQSLSKNGTDYSVYFIYFVAVVSILRSFFYPFRFGEYRDKGIIIYNTIVALFFFFKLPLYVLTPIFFADPIAAIAGRHFPKSKIYKNKTLHGTLACFIVSLISLFYVKNYIHALILSVTLTLLELYGGSLDNFFMCFPIMIYMAFFNV
SIO_010081: PCHAS_1221600
subclass of: SO_0000673
so part of: PCHAS_1221600
location: complement(join(785754..785933,786038..786206,786307..786477,786607..786692))
location: region:785754-786692:-1
so has part: feature:786607-786692:-1:exon
so has part: feature:786307-786477:-1:exon
so has part: feature:786038-786206:-1:exon
so has part: feature:785754-785933:-1:exon

XP_745412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:786607-786692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:786307-786477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:786038-786206:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:785754-785933:-1:exon

PCHAS_1221700
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1221700
old locus tag: PCHAS_122170
so part of: sequence
location: <787417..>788607
location: region:787417-788607:1
so has part: feature:787417-788607:1:exon
subclass of: SO_0000010

3494400
type: Gene
SIO_000068: ncbigene

position:787417:1
position: 787417
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

position:788607:1
position: 788607
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:787417-788607:1:exon

PCHAS_1221700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1221700
old locus tag: PCHAS_122170
product: DNA repair protein RAD14, putative
transcript id: XM_736227.2
SIO_010081: PCHAS_1221700
subclass of: SO_0000673
so part of: PCHAS_1221700
location: <787417..>788607
location: region:787417-788607:1
so has part: feature:787417-788607:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:787417-788607:1:exon

PCHAS_1221700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1221700
old locus tag: PCHAS_122170
note: term=annotation;date=20140502;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=dna repair protein, putative;curatorName=ucb@sanger.ac.uk; term=annotation;date=20150311;qualifier=removed_product=DN A repair protein, putative;qualifier=added_product=dna repair protein rad14, putative;qualifier=added_gene_name=rad14;qualifier=added_l iterature=pmid:25757193;curatorName=ucb@sanger.ac.uk; iprscan;InterPro:IPR009061 : Putative DNA binding;Superfamily:SSF46955; score=1.65E-17;query 235-305;description=Putative DNA-binding domain superfamily
codon start: 1
product: DNA repair protein RAD14, putative
translation: MSDNSQSQNEEDEQNYYHIFYENNLVNDINYFDDSLPHINFYLKFQNKRFLESFFDDVKNDNEIFPPNVEPPDDDVQLCEVQNEENKIKEIRKSKNSELLTDGGFYIDNDSEIECYYENIKKNDNDITNLITNIRGEKNVIDYSYLERNHEFTKKANMIFQKNKEKFIFSIERGNINCSCNKGNDCLDCRPICDDNSEIILKEICFLCNKKKKVNKTLSSIKIYVCYDCKSTDSNFRMISLTKLINKYSISTNDLIKHEKELALLSTKNPRGYSKNMKLYFLFQIKEIAIRKYGSLHKVKSLYNSKILNLKNVNNNNKDNCLKTGKEKKKKKKNIHKYKKPKTIYSNDHIKNMEKNKIICEDNNHEFDNPICINTDDNIYIKKCIKCQYELEFIDF
SIO_010081: PCHAS_1221700
subclass of: SO_0000673
so part of: PCHAS_1221700
location: 787417..788607
location: region:787417-788607:1
so has part: feature:787417-788607:1:exon

XP_741320.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:787417-788607:1:exon

PCHAS_1221800
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1221800
old locus tag: PCHAS_122180
so part of: sequence
location: complement(<788925..>790183)
location: region:788925-790183:-1
so has part: feature:788925-790183:-1:exon
subclass of: SO_0000010

3494399
type: Gene
SIO_000068: ncbigene

position:788925:-1
position: 788925
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:790183:-1
position: 790183
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788925-790183:-1:exon

PCHAS_1221800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1221800
old locus tag: PCHAS_122180
product: conserved protein, unknown function
transcript id: XM_736226.1
SIO_010081: PCHAS_1221800
subclass of: SO_0000673
so part of: PCHAS_1221800
location: complement(join(<788925..789001,789138..789224,789335..789469,789567..789795,789926..>790183))
location: region:788925-790183:-1
so has part: feature:789926-790183:-1:exon
so has part: feature:789567-789795:-1:exon
so has part: feature:789335-789469:-1:exon
so has part: feature:789138-789224:-1:exon
so has part: feature:788925-789001:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789926-790183:-1:exon

position:789926:-1
position: 789926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:789567-789795:-1:exon

position:789567:-1
position: 789567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789795:-1
position: 789795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:789335-789469:-1:exon

position:789335:-1
position: 789335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789469:-1
position: 789469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:789138-789224:-1:exon

position:789138:-1
position: 789138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789224:-1
position: 789224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:788925-789001:-1:exon

position:789001:-1
position: 789001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1221800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1221800
old locus tag: PCHAS_122180
note: term=annotation;date=20180503;qualifier=removed_pro duct=conserved Plasmodium protein, unknown function;qualifier=added_product=conserved protein, unknown function;curatorName=ucb@sanger.ac.uk; ;query 1-6; ;query 7-24; ;query 25-261; ;query 235-235;GPI_cleavage_site_score=0.1462; tmhmm; query 1-262
codon start: 1
product: conserved protein, unknown function
translation: MFLKNVFFVCYIVIFTNYFLLTQIETKKKYILKKYSILNNNKIISRSLRKNKLCFIQKEKNNVLIRRHKYGGTHHKRAFLVFDIIKIFGRLSNKELLGHVISHNNDFIENNKKNCKKNWEILFQNDTINYDILKTFLEKSKFEWPLTVNSGQIKKEGPIDIPVSPIVYIENCRKISDQFKNKNKNTKINLKIINDYVNELPISTDAIQCVFSSFSDLEYLTKENFIQKIHEWAPSDGVLDWYTFVYNLKEEPTDNIKKFFD
SIO_010081: PCHAS_1221800
subclass of: SO_0000673
so part of: PCHAS_1221800
location: complement(join(788925..789001,789138..789224,789335..789469,789567..789795,789926..790183))
location: region:788925-790183:-1
so has part: feature:789926-790183:-1:exon
so has part: feature:789567-789795:-1:exon
so has part: feature:789335-789469:-1:exon
so has part: feature:789138-789224:-1:exon
so has part: feature:788925-789001:-1:exon

XP_741319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:789926-790183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:789567-789795:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:789335-789469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:789138-789224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:788925-789001:-1:exon

PCHAS_1221900
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1221900
old locus tag: PCHAS_122190
so part of: sequence
location: complement(<791398..>792199)
location: region:791398-792199:-1
so has part: feature:791398-792199:-1:exon
subclass of: SO_0000010

3493299
type: Gene
SIO_000068: ncbigene

position:791398:-1
position: 791398
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:792199:-1
position: 792199
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791398-792199:-1:exon

PCHAS_1221900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1221900
old locus tag: PCHAS_122190
product: 60S ribosomal protein L34, putative
transcript id: XM_735137.2
SIO_010081: PCHAS_1221900
subclass of: SO_0000673
so part of: PCHAS_1221900
location: complement(join(<791398..791733,792041..>792199))
location: region:791398-792199:-1
so has part: feature:792041-792199:-1:exon
so has part: feature:791398-791733:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:792041-792199:-1:exon

position:792041:-1
position: 792041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:791398-791733:-1:exon

position:791733:-1
position: 791733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCHAS_1221900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1221900
old locus tag: PCHAS_122190
note: term=annotation;date=20140813;qualifier=removed_pro duct=60S ribosomal protein L34a, putative;qualifier=added_product=60s ribosomal protein l34, putative;qualifier=added_gene_name=rpl34;qualifier=added_l iterature=pmid:24913268;curatorName=ucb@sanger.ac.uk; ;query 148-148;GPI_cleavage_site_score=0.49879998; pfam_scan;Pfam:PF01199.14; E()=3.4E-38;score=129.7;query 1-94;description=Ribosomal_L34e; iprscan;InterPro:IPR008195 : Ribosomal protein L34e;PRINTS:PR01250; score=8.4E-24;query 13-26;description=Ribosomal protein L34Ae; iprscan;InterPro:IPR008195 : Ribosomal protein L34e;PRINTS:PR01250; score=8.4E-24;query 44-54;description=Ribosomal protein L34Ae; iprscan;InterPro:IPR008195 : Ribosomal protein L34e;PRINTS:PR01250; score=8.4E-24;query 64-86;description=Ribosomal protein L34Ae; iprscan;InterPro:IPR008195 : Ribosomal protein L34e;PRINTS:PR01250; score=8.4E-24;query 26-43;description=Ribosomal protein L34Ae; iprscan;InterPro:IPR008195 : Ribosomal protein L34e;Pfam:PF01199; score=3.8E-38;query 1-94;description=Ribosomal protein L34Ae; iprscan;InterPro:IPR018065 : Ribosomal protein L34e, conserved site;Prosite:PS01145; score=1.0;query 15-28;description=Ribosomal protein L34e, conserved site
codon start: 1
product: 60S ribosomal protein L34, putative
translation: MAQRVHYRKHNHYNTKSNKVRPIRTPGGKLTIHVIKKKAGKPKCADCKNPMQGVKALRPADNQRARKKDRKVSRAYGGSICAKCIKERIMRAFLFEEQKCVRQVLKEKKKQEQKVKKVKKEKKDKKEKADKKDKKKVIAKDAKKKVPSSTKNFKKVGDKKKGGK
SIO_010081: PCHAS_1221900
subclass of: SO_0000673
so part of: PCHAS_1221900
location: complement(join(791398..791733,792041..792199))
location: region:791398-792199:-1
so has part: feature:792041-792199:-1:exon
so has part: feature:791398-791733:-1:exon

XP_740230.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:792041-792199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:791398-791733:-1:exon

PCHAS_1222000
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1222000
old locus tag: PCHAS_122200
so part of: sequence
location: complement(<793929..>794621)
location: region:793929-794621:-1
so has part: feature:793929-794621:-1:exon
subclass of: SO_0000010

3498424
type: Gene
SIO_000068: ncbigene

position:793929:-1
position: 793929
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:794621:-1
position: 794621
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793929-794621:-1:exon

PCHAS_1222000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31271
locus tag: PCHAS_1222000
old locus tag: PCHAS_122200
product: conserved Plasmodium protein, unknown function
transcript id: XM_740209.1
SIO_010081: PCHAS_1222000
subclass of: SO_0000673
so part of: PCHAS_1222000
location: complement(<793929..>794621)
location: region:793929-794621:-1
so has part: feature:793929-794621:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:793929-794621:-1:exon

PCHAS_1222000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: PCHAS_1222000
old locus tag: PCHAS_122200
codon start: 1
product: conserved Plasmodium protein, unknown function
translation: MEETNLASTELNTQGETNKPIDSINSNDDISHGVGSGDKHSEHEKLNESDDNVGDTKEGKKVKNKKIDKKKKKLKKEKKLKKEKKLKKEKKLKKEKKLKKAKKLKLKEKKKKKISEYDSDETDSDEELYNNDNFFMDSRLQKNKKGKDKKKRGVEIDEINKKIKKKKSKKQDYIVRNMLLEEYDQAYEKQLQLYATYGLKKYINFLKNYQDTLKEDIKNTPKKKSKHLYV
SIO_010081: PCHAS_1222000
subclass of: SO_0000673
so part of: PCHAS_1222000
location: complement(793929..794621)
location: region:793929-794621:-1
so has part: feature:793929-794621:-1:exon

XP_745302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:793929-794621:-1:exon

PCHAS_1222100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: PCHAS_1222100
old locus tag: PCHAS_122210
so part of: sequence
location: complement(<795327..>796295)
location: region:795327-796295:-1
so has part: feature:795327-796295:-1:exon
subclass of: SO_0000010

3498423
type: Gene
SIO_000068: ncbigene

position:795327:-1
position: 795327
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition

position:796295:-1
position: 796295
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition
type: ExactPosition