Plasmodium chabaudi chabaudi complete apicoplast genome, isolate CB, DNA form A.
type: Entry
definition: Plasmodium chabaudi chabaudi complete apicoplast genome, isolate CB, DNA form A.
sequence version: NC_023293.1
sequence date: 2023-04-03
sequence: sequence
division: INV
label: NC_023293.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
keyword: complete genome
source: apicoplast Plasmodium chabaudi chabaudi
organism: Plasmodium chabaudi chabaudi
taxonomy: Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia).
reference: 1
references: 23613931
reference: 2
reference: 3
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to HF563595.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0001259
sequence length: 29623
topology: circular
so has quality: SO_0000988
location: 1..29623
location: region:1-29623:1
RO_0002162: 31271

NC_023293
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: The unique structure of the apicoplast genome of the rodent malaria parasite Plasmodium chabaudi chabaudi
author: Sato, S.
author: Sesay, A.K.
author: Holder, A.A.
journal: PLoS ONE 8 (4), E61778 (2013)
pubmed: 23613931
comments: Publication Status: Online-Only

23613931
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (30-DEC-2016) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Sato, S.
journal: Submitted (23-NOV-2012) Sato S., MRC National Institute for Medical Research, Division of Parasitology, The Ridgeway, Mill Hill, London NW7 1AA, UNITED KINGDOM

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29623:1
position: 29623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-29623:1:source
so part of: sequence
organism: Plasmodium chabaudi chabaudi
organelle: plastid:apicoplast
mol type: genomic DNA
isolate: CB
sub species: chabaudi
note: DNA form A

31271
type: Taxonomy
SIO_000068: taxonomy

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 31271
rpt family: SIR2
rpt type: INVERTED
so part of: sequence
location: join(29443..29623,1..107)
location: region:1-29623:1
so has part: feature:29443-29623:1:region
so has part: feature:1-107:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:29443-29623:1:region

position:29443:1
position: 29443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-107:1:region

position:107:1
position: 107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BN827_A010
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Thr (UGU)2
locus tag: BN827_A010
so part of: sequence
location: 1..73
location: region:1-73:1
so has part: feature:1-73:1:exon
subclass of: SO_0000663

18158137
type: Gene
SIO_000068: ncbigene

position:73:1
position: 73
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-73:1:exon

BN827_A010
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Thr (UGU)2
locus tag: BN827_A010
product: tRNA-Thr
note: C28
anticodon: (pos:34..36,aa:Thr,seq:tgt)
SIO_010081: BN827_A010
subclass of: SO_0000673
so part of: BN827_A010
location: 1..73
location: region:1-73:1
so has part: feature:1-73:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-73:1:exon

BN827_A020
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rps4
locus tag: BN827_A020
so part of: sequence
location: 100..723
location: region:100-723:1
so has part: feature:100-723:1:exon
subclass of: SO_0000010

18158163
type: Gene
SIO_000068: ncbigene

position:100:1
position: 100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723:1
position: 723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100-723:1:exon

BN827_A020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rps4
locus tag: BN827_A020
codon start: 1
transl table: 11
product: small subunit ribosomal protein 4 (Rps4)
translation: MIKFLTSKIKILKKLNIPFLLYLSSKYNYKLKINKYAYKSYFDLKLKFIRYICYNYCITFKQYLYYLKKIKGYNENNLYFKLLNILESRLDVFLVNIGFFKTILQSRYYIKYKYVYMNNIYCNYYNIKLKSNDIIFFNNKIKYIILYNLIYRYNIYIYISSLYKYNFIKSYSFNEYFIICIYNLKIKILNNLYLNNILYIYNNIYNI
SIO_010081: BN827_A020
subclass of: SO_0000673
so part of: BN827_A020
location: 100..723
location: region:100-723:1
so has part: feature:100-723:1:exon

YP_009272504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100-723:1:exon

BN827_A030
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-His (GUG)
locus tag: BN827_A030
so part of: sequence
location: 739..810
location: region:739-810:1
so has part: feature:739-810:1:exon
subclass of: SO_0000663

18158175
type: Gene
SIO_000068: ncbigene

position:739:1
position: 739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810:1
position: 810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:739-810:1:exon

BN827_A030
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-His (GUG)
locus tag: BN827_A030
product: tRNA-His
anticodon: (pos:772..774,aa:His,seq:gtg)
SIO_010081: BN827_A030
subclass of: SO_0000673
so part of: BN827_A030
location: 739..810
location: region:739-810:1
so has part: feature:739-810:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:739-810:1:exon

BN827_A040
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Cys (GCA)
locus tag: BN827_A040
so part of: sequence
location: 825..897
location: region:825-897:1
so has part: feature:825-897:1:exon
subclass of: SO_0000663

18158170
type: Gene
SIO_000068: ncbigene

position:825:1
position: 825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897:1
position: 897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825-897:1:exon

BN827_A040
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Cys (GCA)
locus tag: BN827_A040
product: tRNA-Cys
anticodon: (pos:859..861,aa:Cys,seq:gca)
SIO_010081: BN827_A040
subclass of: SO_0000673
so part of: BN827_A040
location: 825..897
location: region:825-897:1
so has part: feature:825-897:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825-897:1:exon

BN827_A050
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Leu (UAA)
locus tag: BN827_A050
so part of: sequence
location: 905..1145
location: region:905-1145:1
so has part: feature:905-1145:1:exon
subclass of: SO_0000663

18158166
type: Gene
SIO_000068: ncbigene

position:905:1
position: 905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145:1
position: 1145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905-1145:1:exon

BN827_A050
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Leu (UAA)
locus tag: BN827_A050
product: tRNA-Leu
anticodon: (pos:join(940,1096..1097),aa:Leu,seq:taa)
SIO_010081: BN827_A050
subclass of: SO_0000673
so part of: BN827_A050
location: join(905..940,1096..1145)
location: region:905-1145:1
so has part: feature:905-940:1:exon
so has part: feature:1096-1145:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:905-940:1:exon

position:940:1
position: 940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1096-1145:1:exon

position:1096:1
position: 1096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BN827_A060
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-fM (CAU)
locus tag: BN827_A060
so part of: sequence
location: 1155..1241
location: region:1155-1241:1
so has part: feature:1155-1241:1:exon
subclass of: SO_0000663

18158196
type: Gene
SIO_000068: ncbigene

position:1155:1
position: 1155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241:1
position: 1241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155-1241:1:exon

BN827_A060
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-fM (CAU)
locus tag: BN827_A060
product: tRNA-Met
note: transfer RNA-fM (CAU)
anticodon: (pos:1189..1191,aa:Met,seq:cat)
SIO_010081: BN827_A060
subclass of: SO_0000673
so part of: BN827_A060
location: 1155..1241
location: region:1155-1241:1
so has part: feature:1155-1241:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1155-1241:1:exon

BN827_A070
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Tyr (GUA)
locus tag: BN827_A070
so part of: sequence
location: 1251..1334
location: region:1251-1334:1
so has part: feature:1251-1334:1:exon
subclass of: SO_0000663

18158184
type: Gene
SIO_000068: ncbigene

position:1251:1
position: 1251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334:1
position: 1334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1251-1334:1:exon

BN827_A070
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Tyr (GUA)
locus tag: BN827_A070
product: tRNA-Tyr
anticodon: (pos:1285..1287,aa:Tyr,seq:gta)
SIO_010081: BN827_A070
subclass of: SO_0000673
so part of: BN827_A070
location: 1251..1334
location: region:1251-1334:1
so has part: feature:1251-1334:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1251-1334:1:exon

BN827_A080
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Ser (GCU)
locus tag: BN827_A080
so part of: sequence
location: 1344..1433
location: region:1344-1433:1
so has part: feature:1344-1433:1:exon
subclass of: SO_0000663

18158138
type: Gene
SIO_000068: ncbigene

position:1344:1
position: 1344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1433:1
position: 1433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344-1433:1:exon

BN827_A080
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Ser (GCU)
locus tag: BN827_A080
product: tRNA-Ser
anticodon: (pos:1378..1380,aa:Ser,seq:gct)
SIO_010081: BN827_A080
subclass of: SO_0000673
so part of: BN827_A080
location: 1344..1433
location: region:1344-1433:1
so has part: feature:1344-1433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1344-1433:1:exon

BN827_A090
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Asp (GUC)
locus tag: BN827_A090
so part of: sequence
location: 1445..1519
location: region:1445-1519:1
so has part: feature:1445-1519:1:exon
subclass of: SO_0000663

18158169
type: Gene
SIO_000068: ncbigene

position:1445:1
position: 1445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1519:1
position: 1519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1445-1519:1:exon

BN827_A090
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Asp (GUC)
locus tag: BN827_A090
product: tRNA-Asp
anticodon: (pos:1480..1482,aa:Asp,seq:gtc)
SIO_010081: BN827_A090
subclass of: SO_0000673
so part of: BN827_A090
location: 1445..1519
location: region:1445-1519:1
so has part: feature:1445-1519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1445-1519:1:exon

BN827_A100
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Lys (UUU)
locus tag: BN827_A100
so part of: sequence
location: 1529..1601
location: region:1529-1601:1
so has part: feature:1529-1601:1:exon
subclass of: SO_0000663

18158157
type: Gene
SIO_000068: ncbigene

position:1529:1
position: 1529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1601:1
position: 1601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1529-1601:1:exon

BN827_A100
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Lys (UUU)
locus tag: BN827_A100
product: tRNA-Lys
anticodon: (pos:1562..1564,aa:Lys,seq:ttt)
SIO_010081: BN827_A100
subclass of: SO_0000673
so part of: BN827_A100
location: 1529..1601
location: region:1529-1601:1
so has part: feature:1529-1601:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1529-1601:1:exon

BN827_A110
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Glu (UUC)
locus tag: BN827_A110
so part of: sequence
location: 1614..1684
location: region:1614-1684:1
so has part: feature:1614-1684:1:exon
subclass of: SO_0000663

18158144
type: Gene
SIO_000068: ncbigene

position:1614:1
position: 1614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684:1
position: 1684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1614-1684:1:exon

BN827_A110
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Glu (UUC)
locus tag: BN827_A110
product: tRNA-Glu
anticodon: (pos:1646..1648,aa:Glu,seq:ttc)
SIO_010081: BN827_A110
subclass of: SO_0000673
so part of: BN827_A110
location: 1614..1684
location: region:1614-1684:1
so has part: feature:1614-1684:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1614-1684:1:exon

BN827_A120
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Pro (UGG)
locus tag: BN827_A120
so part of: sequence
location: 1700..1771
location: region:1700-1771:1
so has part: feature:1700-1771:1:exon
subclass of: SO_0000663

18158155
type: Gene
SIO_000068: ncbigene

position:1700:1
position: 1700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1771:1
position: 1771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1700-1771:1:exon

BN827_A120
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Pro (UGG)
locus tag: BN827_A120
product: tRNA-Pro
anticodon: (pos:1732..1734,aa:Pro,seq:tgg)
SIO_010081: BN827_A120
subclass of: SO_0000673
so part of: BN827_A120
location: 1700..1771
location: region:1700-1771:1
so has part: feature:1700-1771:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1700-1771:1:exon

BN827_A130
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rpl4
locus tag: BN827_A130
so part of: sequence
location: 1798..2394
location: region:1798-2394:1
so has part: feature:1798-2394:1:exon
subclass of: SO_0000010

18158158
type: Gene
SIO_000068: ncbigene

position:1798:1
position: 1798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2394:1
position: 2394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1798-2394:1:exon

BN827_A130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rpl4
locus tag: BN827_A130
codon start: 1
transl table: 11
product: large subunit ribosomal protein 4 (Rpl4)
translation: MDNIIILNINNNIFNNNIIFKYKYNFFIKLYLNNYIKIYKLLIYIIKYYYLNSIYRYKNTKNRSLINFSKKKIRVQKGTGKARLKTLSSTVCKQGACTFGPFYKSKIIKYNKFIYKLIFIYLLINKRSNILIIKFENILYLLYIYKNINFNINKLIYKILYLNGILLYKNFKIFNLYEINNKYILLNLILYNYIIFII
SIO_010081: BN827_A130
subclass of: SO_0000673
so part of: BN827_A130
location: 1798..2394
location: region:1798-2394:1
so has part: feature:1798-2394:1:exon

YP_009272505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1798-2394:1:exon

BN827_A140
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rpl23
locus tag: BN827_A140
so part of: sequence
location: 2405..2620
location: region:2405-2620:1
so has part: feature:2405-2620:1:exon
subclass of: SO_0000010

18158172
type: Gene
SIO_000068: ncbigene

position:2405:1
position: 2405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2620:1
position: 2620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2405-2620:1:exon

BN827_A140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rpl23
locus tag: BN827_A140
codon start: 1
transl table: 11
product: large subunit ribosomal protein 23 (Rpl23)
translation: MKEIILNFCLNNIFYRINFINSKFYIIYTNKWLTKLDIKYIIKNIFKSNKNIKINNINKENTLKIYFIKLK
SIO_010081: BN827_A140
subclass of: SO_0000673
so part of: BN827_A140
location: 2405..2620
location: region:2405-2620:1
so has part: feature:2405-2620:1:exon

YP_009272506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2405-2620:1:exon

BN827_A150
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rpl2
locus tag: BN827_A150
so part of: sequence
location: 2617..3357
location: region:2617-3357:1
so has part: feature:2617-3357:1:exon
subclass of: SO_0000010

18158167
type: Gene
SIO_000068: ncbigene

position:2617:1
position: 2617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3357:1
position: 3357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2617-3357:1:exon

BN827_A150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rpl2
locus tag: BN827_A150
codon start: 1
transl table: 11
product: large subunit ribosomal protein 2 (Rpl2)
translation: MILKLKKYNSYKYLKNFGKNNKGYITIYNKGGGKLKYQYKLIDFWYDNYNIDINYKIFLFKKIKTYFKNSYIGCILYLSYKFNYLQKYIVLNHNYILNSIYYITNINNIRLGSYIQLKYCKLGTYIYNISYNNKGSIFARSAGTYAQILIFYKNLVYIKLPSKKFKYINYNNFCYIGINSNILYNKFKIKNSGYNIFYNKRPKVRGKAKNVCDHPHGGGKGKTSIGRKYPCSKKGLHSKGYKTKKI
SIO_010081: BN827_A150
subclass of: SO_0000673
so part of: BN827_A150
location: 2617..3357
location: region:2617-3357:1
so has part: feature:2617-3357:1:exon

YP_009272507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2617-3357:1:exon

BN827_A160
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rps19
locus tag: BN827_A160
so part of: sequence
location: 3377..3646
location: region:3377-3646:1
so has part: feature:3377-3646:1:exon
subclass of: SO_0000010

18158188
type: Gene
SIO_000068: ncbigene

position:3377:1
position: 3377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3646:1
position: 3646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3377-3646:1:exon

BN827_A160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rps19
locus tag: BN827_A160
codon start: 1
transl table: 11
product: small subunit ribosomal protein 19 (Rps19)
translation: MIKLYWLKVSLNNKYIFINLNNKYNRNIILTIYNKNLYIYKKLLNLYIKIYNGYKFIPIYINKYKLYKKIGNFIYTKYIKYNIKELVLN
SIO_010081: BN827_A160
subclass of: SO_0000673
so part of: BN827_A160
location: 3377..3646
location: region:3377-3646:1
so has part: feature:3377-3646:1:exon

YP_009272508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3377-3646:1:exon

BN827_A170
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rps3
locus tag: BN827_A170
so part of: sequence
location: 3655..4290
location: region:3655-4290:1
so has part: feature:3655-4290:1:exon
subclass of: SO_0000010

18158153
type: Gene
SIO_000068: ncbigene

position:3655:1
position: 3655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4290:1
position: 4290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3655-4290:1:exon

BN827_A170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rps3
locus tag: BN827_A170
codon start: 1
transl table: 11
product: small subunit ribosomal protein 3 (Rps3)
translation: MGQKVHPLIFRSLIFKNYINNFYINISKNKYYLINLLLIYLLYYNFYNICYLKNNYVDININLYINKFIIVLLFYNNLKYNIINLKYIFILLNYFNYYYYKIYNYLCILKIKYTNNINIIIFYIKQYYIKYKSLRLVFDYLYNNLLKKYNYNIKGLKIKFSGCFKNSLKTKVEIYTYGNISLSTLTNKIKYINDIINTKYGILSIKVWINI
SIO_010081: BN827_A170
subclass of: SO_0000673
so part of: BN827_A170
location: 3655..4290
location: region:3655-4290:1
so has part: feature:3655-4290:1:exon

YP_009272509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3655-4290:1:exon

BN827_A180
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rpl16
locus tag: BN827_A180
so part of: sequence
location: 4309..4701
location: region:4309-4701:1
so has part: feature:4309-4701:1:exon
subclass of: SO_0000010

18158192
type: Gene
SIO_000068: ncbigene

position:4309:1
position: 4309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4701:1
position: 4701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4309-4701:1:exon

BN827_A180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rpl16
locus tag: BN827_A180
codon start: 1
transl table: 11
product: large subunit ribosomal protein 16 (Rpl16)
translation: MINNIRKTQRGRIKGNFNLKFLKLYWGIISLTSGFLTSKQFDTSKFIINKYIKKIGYYNIYIQCIKSMTKKSLKTRMGAGKGPIELYVCKIKRKKLLFDISYVSVDIIYKITKILSYKLNLKLQYIKKII
SIO_010081: BN827_A180
subclass of: SO_0000673
so part of: BN827_A180
location: 4309..4701
location: region:4309-4701:1
so has part: feature:4309-4701:1:exon

YP_009272510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4309-4701:1:exon

BN827_A190
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rps17
locus tag: BN827_A190
so part of: sequence
location: 4709..4933
location: region:4709-4933:1
so has part: feature:4709-4933:1:exon
subclass of: SO_0000010

18158190
type: Gene
SIO_000068: ncbigene

position:4709:1
position: 4709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4933:1
position: 4933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4709-4933:1:exon

BN827_A190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rps17
locus tag: BN827_A190
codon start: 1
transl table: 11
product: small subunit ribosomal protein 17 (Rps17)
translation: MIIKIGYVIKKICYNIKIICISYYKYSYIYKKLLLCNKYIKVYDRRNEIIINDYVLIKYYKKSKFCNNKIIKIL
SIO_010081: BN827_A190
subclass of: SO_0000673
so part of: BN827_A190
location: 4709..4933
location: region:4709-4933:1
so has part: feature:4709-4933:1:exon

YP_009272511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4709-4933:1:exon

BN827_A200
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rpl14
locus tag: BN827_A200
so part of: sequence
location: 4930..5292
location: region:4930-5292:1
so has part: feature:4930-5292:1:exon
subclass of: SO_0000010

18158159
type: Gene
SIO_000068: ncbigene

position:4930:1
position: 4930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5292:1
position: 5292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4930-5292:1:exon

BN827_A200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rpl14
locus tag: BN827_A200
codon start: 1
transl table: 11
product: large subunit ribosomal protein 14 (Rpl14)
translation: MIYLNSILDVLDNSGILKFKYINTLNKSKNIKYGDILIGVVYKLYNNNLYKKSDKCKGILVQYKHFINLKLYYSIKFNKNAVIILNNDLNSVGTKSNSIILKYIKYKPNINIKKLKIKYI
SIO_010081: BN827_A200
subclass of: SO_0000673
so part of: BN827_A200
location: 4930..5292
location: region:4930-5292:1
so has part: feature:4930-5292:1:exon

YP_009272512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4930-5292:1:exon

BN827_A210
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rps8
locus tag: BN827_A210
so part of: sequence
location: 5292..5678
location: region:5292-5678:1
so has part: feature:5292-5678:1:exon
subclass of: SO_0000010

18158185
type: Gene
SIO_000068: ncbigene

position:5678:1
position: 5678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5292-5678:1:exon

BN827_A210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rps8
locus tag: BN827_A210
codon start: 1
transl table: 11
product: small subunit ribosomal protein 8 (Rps8)
translation: MILRLLNKIKYNFKLNKNFILYKFNKIIYYLIILLYNYNYILKFYIIIINNRYYIFIILNKYKKIIYLKVYIKYNQLFYINYNKLISFIKLNKYFKGLLVIYSCKYKFITHILSLKYKIGGILICYIF
SIO_010081: BN827_A210
subclass of: SO_0000673
so part of: BN827_A210
location: 5292..5678
location: region:5292-5678:1
so has part: feature:5292-5678:1:exon

YP_009272513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5292-5678:1:exon

BN827_A220
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rpl6
locus tag: BN827_A220
so part of: sequence
location: 5704..6225
location: region:5704-6225:1
so has part: feature:5704-6225:1:exon
subclass of: SO_0000010

18158191
type: Gene
SIO_000068: ncbigene

position:5704:1
position: 5704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6225:1
position: 6225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5704-6225:1:exon

BN827_A220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rpl6
locus tag: BN827_A220
codon start: 1
transl table: 11
product: large subunit ribosomal protein 6 (Rpl6)
translation: MLNYKKYIFFYNNNINKNDIYYYLVLDKKFFNYIYIIYNKKNKNIINYIYILNYIYILFFNNNLFYLLNKIYKYNFYNIYIINNNIFKLILTIIGINYKFYYLKKYNILIFKLKYNHKIIIKLPNIILCNIYINKNVIELCSYNLFILNSIGKLINSFQFINKYKELGIKLNI
SIO_010081: BN827_A220
subclass of: SO_0000673
so part of: BN827_A220
location: 5704..6225
location: region:5704-6225:1
so has part: feature:5704-6225:1:exon

YP_009272514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5704-6225:1:exon

BN827_A230
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rps5
locus tag: BN827_A230
so part of: sequence
location: 6235..6969
location: region:6235-6969:1
so has part: feature:6235-6969:1:exon
subclass of: SO_0000010

18158136
type: Gene
SIO_000068: ncbigene

position:6235:1
position: 6235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6969:1
position: 6969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6235-6969:1:exon

BN827_A230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rps5
locus tag: BN827_A230
codon start: 1
transl table: 11
product: small subunit ribosomal protein 5 (Rps5)
translation: MRNILLKKKLYNSKNIYILYYILIIFKSIFIILFNSKYNVNYYLYNKIYNLFIIYIKLYYIINNIYYNNNYYYIYNMNYIYFYIYKYNSLNNKINIIYNNINIIEKIIDIKKISYTIKKGRIKRYKVIVLTGNKQGWVGIGIGKNVNLNKAILSSKVNSLNNIYYFKYSMLNMYKLKYIYINYNNIFLKLQFKICNYLNIRFLLFKYLFECLGYLNCKIIIYYNIINNKYNLLNKILLILFNLL
SIO_010081: BN827_A230
subclass of: SO_0000673
so part of: BN827_A230
location: 6235..6969
location: region:6235-6969:1
so has part: feature:6235-6969:1:exon

YP_009272515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6235-6969:1:exon

BN827_A240
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: BN827_A240
so part of: sequence
location: 6966..7208
location: region:6966-7208:1
so has part: feature:6966-7208:1:exon
subclass of: SO_0000010

18158189
type: Gene
SIO_000068: ncbigene

position:6966:1
position: 6966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7208:1
position: 7208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6966-7208:1:exon

BN827_A240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: BN827_A240
note: ORF91
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIIYLNKSLYLIYILKYINGLNLYNINLLLNMSNISIFNIKNNIFRIKFSLYRLNLYIHKIFKIKINNIINNKIKKLNIK
SIO_010081: BN827_A240
subclass of: SO_0000673
so part of: BN827_A240
location: 6966..7208
location: region:6966-7208:1
so has part: feature:6966-7208:1:exon

YP_009272516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6966-7208:1:exon

BN827_A250
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rpl36
locus tag: BN827_A250
so part of: sequence
location: 7209..7319
location: region:7209-7319:1
so has part: feature:7209-7319:1:exon
subclass of: SO_0000010

18158187
type: Gene
SIO_000068: ncbigene

position:7209:1
position: 7209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7319:1
position: 7319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7209-7319:1:exon

BN827_A250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rpl36
locus tag: BN827_A250
codon start: 1
transl table: 11
product: large subunit ribosomal protein 36 (Rpl36)
translation: MKKRSSIKKICNNCQLIRRFKKLHIICKNKKHKQTQ
SIO_010081: BN827_A250
subclass of: SO_0000673
so part of: BN827_A250
location: 7209..7319
location: region:7209-7319:1
so has part: feature:7209-7319:1:exon

YP_009272517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7209-7319:1:exon

BN827_A260
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rps11
locus tag: BN827_A260
so part of: sequence
location: 7316..7708
location: region:7316-7708:1
so has part: feature:7316-7708:1:exon
subclass of: SO_0000010

18158180
type: Gene
SIO_000068: ncbigene

position:7316:1
position: 7316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7708:1
position: 7708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7316-7708:1:exon

BN827_A260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rps11
locus tag: BN827_A260
codon start: 1
transl table: 11
product: small subunit ribosomal protein 11 (Rps11)
translation: MNTNYIIFLYFKLTLKNTLVTISKYKQLNFKYIFIKNIKSISCGCLKNFKNRLKSTIVANNILTINIIKYLINKNLYKINVIFNGINSYRIHILKLLLNIKYKNKKLNINKLFDITSIPYNGCKISKRKY
SIO_010081: BN827_A260
subclass of: SO_0000673
so part of: BN827_A260
location: 7316..7708
location: region:7316-7708:1
so has part: feature:7316-7708:1:exon

YP_009272518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7316-7708:1:exon

BN827_A270
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rps12
locus tag: BN827_A270
so part of: sequence
location: 7714..8088
location: region:7714-8088:1
so has part: feature:7714-8088:1:exon
subclass of: SO_0000010

18158164
type: Gene
SIO_000068: ncbigene

position:7714:1
position: 7714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8088:1
position: 8088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7714-8088:1:exon

BN827_A270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rps12
locus tag: BN827_A270
codon start: 1
transl table: 11
product: small subunit ribosomal protein 12 (Rps12)
translation: MLTITKLLYKKKIKSFKKIKKYNNYLLNSPQKKGIVLKILIKTPKKPNSALRKVAKIKLSNNKELLAYIPGEGKSVQEHNFVLIKGGRVKDLPGIRYKVIRGALDAIGVKNRKTSRSKYGAKKI
SIO_010081: BN827_A270
subclass of: SO_0000673
so part of: BN827_A270
location: 7714..8088
location: region:7714-8088:1
so has part: feature:7714-8088:1:exon

YP_009272519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7714-8088:1:exon

BN827_A280
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rps7
locus tag: BN827_A280
so part of: sequence
location: 8104..8535
location: region:8104-8535:1
so has part: feature:8104-8535:1:exon
subclass of: SO_0000010

18158160
type: Gene
SIO_000068: ncbigene

position:8104:1
position: 8104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8535:1
position: 8535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8104-8535:1:exon

BN827_A280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rps7
locus tag: BN827_A280
codon start: 1
transl table: 11
product: small subunit ribosomal protein 7 (Rps7)
translation: MTVLFKYFIKIFLKKGKLNKSIKLLIYILYLLKKITNKFGIIIFNKAIKNLLLPFSFYKIKINTIKYNIPIIISYNKSIFNVYKLFIKIIQNKNTLLYKIICKYLILSYNKEGDLYKMKLNFIKQFISNRTYIYLLNKKTIKI
SIO_010081: BN827_A280
subclass of: SO_0000673
so part of: BN827_A280
location: 8104..8535
location: region:8104-8535:1
so has part: feature:8104-8535:1:exon

YP_009272520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8104-8535:1:exon

BN827_A290
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tufA
locus tag: BN827_A290
so part of: sequence
location: 8580..9809
location: region:8580-9809:1
so has part: feature:8580-9809:1:exon
subclass of: SO_0000010

18158162
type: Gene
SIO_000068: ncbigene

position:8580:1
position: 8580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9809:1
position: 9809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8580-9809:1:exon

BN827_A290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: tufA
locus tag: BN827_A290
codon start: 1
transl table: 11
product: elongation factor Tu (EF-Tu)
translation: MNNKLFIRNKQHINLGTIGHVDHGKTTLTTAISYLLNLQGLSKKYSYSDIDSSPEEKIRGITINTTHIEYETLTKHCAHIDCPGHSDYIKNMIIGATQMDIAILVISIIDGIMPQTYEHLLLIKQIGIKNLIIFLNKEDLCNDEELIDFIKLEINELLTKYNFDLNNIHILTGSALNVIDIIQKNKNYEVIKSNIWIQKLNNLINIIDSIQIPIRNINDYFFMSIEDVFSITGRGTVVTGKIEQGCININNEVELLKFEKSSILTTVIGLEMFKKQLIQAQSGDNVGVLLRNVQKKDIKRGMILATPNKLKVYKLFTAEVYILTKDEGGRHKPFNVGYKPQFFIYTVDVTGEIKDICLNNISQKVAIPGDKLTLTIELKHYIVLTLNMKFSIREGGKTIGAGIITNIIN
SIO_010081: BN827_A290
subclass of: SO_0000673
so part of: BN827_A290
location: 8580..9809
location: region:8580-9809:1
so has part: feature:8580-9809:1:exon

YP_009272521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8580-9809:1:exon

BN827_A300
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: BN827_A300
so part of: sequence
location: 9812..10048
location: region:9812-10048:1
so has part: feature:9812-10048:1:exon
subclass of: SO_0000010

18158146
type: Gene
SIO_000068: ncbigene

position:9812:1
position: 9812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10048:1
position: 10048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9812-10048:1:exon

BN827_A300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: BN827_A300
note: ORF78
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVINKNLNKIFNKKIIKIVKYFNLFFYNLFIWIYIIILIYILINKKYFKIIYNVYKYLINFLFIILLLNKCQKSDLN
SIO_010081: BN827_A300
subclass of: SO_0000673
so part of: BN827_A300
location: 9812..10048
location: region:9812-10048:1
so has part: feature:9812-10048:1:exon

YP_009272522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9812-10048:1:exon

BN827_A310
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Phe (GAA)
locus tag: BN827_A310
so part of: sequence
location: complement(10025..10096)
location: region:10025-10096:-1
so has part: feature:10025-10096:-1:exon
subclass of: SO_0000663

18158186
type: Gene
SIO_000068: ncbigene

position:10025:-1
position: 10025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10096:-1
position: 10096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10025-10096:-1:exon

BN827_A310
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Phe (GAA)
locus tag: BN827_A310
product: tRNA-Phe
anticodon: (pos:complement(10062..10064),aa:Phe,seq:gaa)
SIO_010081: BN827_A310
subclass of: SO_0000673
so part of: BN827_A310
location: complement(10025..10096)
location: region:10025-10096:-1
so has part: feature:10025-10096:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10025-10096:-1:exon

BN827_A320
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Gln (UUG)
locus tag: BN827_A320
so part of: sequence
location: 10120..10191
location: region:10120-10191:1
so has part: feature:10120-10191:1:exon
subclass of: SO_0000663

18158147
type: Gene
SIO_000068: ncbigene

position:10120:1
position: 10120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10191:1
position: 10191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10120-10191:1:exon

BN827_A320
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Gln (UUG)
locus tag: BN827_A320
product: tRNA-Gln
anticodon: (pos:10153..10155,aa:Gln,seq:ttg)
SIO_010081: BN827_A320
subclass of: SO_0000673
so part of: BN827_A320
location: 10120..10191
location: region:10120-10191:1
so has part: feature:10120-10191:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10120-10191:1:exon

BN827_A330
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Gly (ACC)
locus tag: BN827_A330
so part of: sequence
location: 10198..10269
location: region:10198-10269:1
so has part: feature:10198-10269:1:exon
subclass of: SO_0000663

18158181
type: Gene
SIO_000068: ncbigene

position:10198:1
position: 10198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10269:1
position: 10269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10198-10269:1:exon

BN827_A330
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Gly (ACC)
locus tag: BN827_A330
product: tRNA-Gly
anticodon: (pos:10231..10233,aa:Gly,seq:acc)
SIO_010081: BN827_A330
subclass of: SO_0000673
so part of: BN827_A330
location: 10198..10269
location: region:10198-10269:1
so has part: feature:10198-10269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10198-10269:1:exon

BN827_A340
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Trp (CCA)
locus tag: BN827_A340
so part of: sequence
location: 10283..10353
location: region:10283-10353:1
so has part: feature:10283-10353:1:exon
subclass of: SO_0000663

18158193
type: Gene
SIO_000068: ncbigene

position:10283:1
position: 10283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10353:1
position: 10353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10283-10353:1:exon

BN827_A340
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Trp (CCA)
locus tag: BN827_A340
product: tRNA-Trp
anticodon: (pos:10315..10317,aa:Trp,seq:cca)
SIO_010081: BN827_A340
subclass of: SO_0000673
so part of: BN827_A340
location: 10283..10353
location: region:10283-10353:1
so has part: feature:10283-10353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10283-10353:1:exon

BN827_A350
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: BN827_A350
so part of: sequence
location: 10379..10756
location: region:10379-10756:1
so has part: feature:10379-10756:1:exon
subclass of: SO_0000010

18158161
type: Gene
SIO_000068: ncbigene

position:10379:1
position: 10379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10756:1
position: 10756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10379-10756:1:exon

BN827_A350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: BN827_A350
note: ORF129
codon start: 1
transl table: 11
product: hypothetical protein
translation: MILLYKYKISIKNKGNNKVNLISILNYKFKSYNINLNLLNKKINEYINKYKLNIFIIYIYSNKTFKIIYNYTLFSLYKKYNNKLNNINLIYKILLYKKFQLLFYNIIQLFYIIINNLINYNKNLI
SIO_010081: BN827_A350
subclass of: SO_0000673
so part of: BN827_A350
location: 10379..10756
location: region:10379-10756:1
so has part: feature:10379-10756:1:exon

YP_009272523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10379-10756:1:exon

BN827_A360
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: clpC
locus tag: BN827_A360
so part of: sequence
location: 10761..13022
location: region:10761-13022:1
so has part: feature:10761-13022:1:exon
subclass of: SO_0000010

18158195
type: Gene
SIO_000068: ncbigene

position:10761:1
position: 10761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13022:1
position: 13022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10761-13022:1:exon

BN827_A360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: clpC
locus tag: BN827_A360
codon start: 1
transl table: 11
product: caseinolytic protease C (ClpC)
translation: MILNNLYCTHELIIIFLKAEYIALKYNNYFIMPIHLLLGLLLTNNLCTQFLHINKKLITDKLISLLLSKYTYYNNKNVINAIFSNKVINILTKLNNINFKVNSLNLLILLLNEKNNEINYLFKYLNLKNLNFNYYIPNTTFPINIQFKLKEISKNILNLNFIYNYNNINIYKLQYIKLLQILNLNIKKHIFIEGEEENIFSFLNILINNINNKIVPLYLYNTEIWVLNDLFNYDIYTIISKILDISNYFINNKYKLILIIKNIELFNDDDNKLYYLYLLLNKISNSNIHIIIPINKEKYNLYFKSYNLYKNYFFNNIKLKDLSILQLFLILKNNIQNYINYYKINIPNNVLYELINLSKKYILNLNSPIIPLILLENSCSKKYLYNSNTKILNYKFTNTIIKQKSSLTINDIKNSISEYLNISKINLFKNNKINKYNLIKLEQYLYNNIHGQNHIFNNIIPAIKQNLIGLKTKNKPIGSWILCGPSGTGKTELAKILAKQLFGSENELIRFDMSEYMEKHSVSRLIGSPPGYIGYSEGGQLTEQVYNKPNCVILFDEIEKAHPDIYNIMLQILDEGRLTDTTGKLIDFTNTIILLTSNLGCPTNYDKYLNNKNYLNEFDLKDIKNNIKTKITNYFKPELLNRLTNILIFNPLNIKSLNLIFNKFITELKTKLYLNKLNIIISINNNLKYFIIKLTYNPLYGARPLKRLLELIFDKSISDLLLNYNKKYFNINKYILYYFLNQHYNLKFNIYSL
SIO_010081: BN827_A360
subclass of: SO_0000673
so part of: BN827_A360
location: 10761..13022
location: region:10761-13022:1
so has part: feature:10761-13022:1:exon

YP_009272524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10761-13022:1:exon

BN827_A370
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Gly (UCC)
locus tag: BN827_A370
so part of: sequence
location: 13036..13108
location: region:13036-13108:1
so has part: feature:13036-13108:1:exon
subclass of: SO_0000663

18158194
type: Gene
SIO_000068: ncbigene

position:13036:1
position: 13036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13108:1
position: 13108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13036-13108:1:exon

BN827_A370
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Gly (UCC)
locus tag: BN827_A370
product: tRNA-Gly
anticodon: (pos:13070..13072,aa:Gly,seq:tcc)
SIO_010081: BN827_A370
subclass of: SO_0000673
so part of: BN827_A370
location: 13036..13108
location: region:13036-13108:1
so has part: feature:13036-13108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13036-13108:1:exon

BN827_A380
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: BN827_A380
so part of: sequence
location: 13139..13372
location: region:13139-13372:1
so has part: feature:13139-13372:1:exon
subclass of: SO_0000010

18158197
type: Gene
SIO_000068: ncbigene

position:13139:1
position: 13139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13372:1
position: 13372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13139-13372:1:exon

BN827_A380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: BN827_A380
note: ORF79
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNIFLYSKSNKTKYKTYKIYLYFKKHNKYNIIKLGIYNSKLNIISCIYYILLKYLKYGFKLNKNIIKILLYKFKCY
SIO_010081: BN827_A380
subclass of: SO_0000673
so part of: BN827_A380
location: 13139..13372
location: region:13139-13372:1
so has part: feature:13139-13372:1:exon

YP_009272525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13139-13372:1:exon

BN827_A390
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Ser (UGA)
locus tag: BN827_A390
so part of: sequence
location: 13392..13476
location: region:13392-13476:1
so has part: feature:13392-13476:1:exon
subclass of: SO_0000663

18158182
type: Gene
SIO_000068: ncbigene

position:13392:1
position: 13392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13476:1
position: 13476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13392-13476:1:exon

BN827_A390
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Ser (UGA)
locus tag: BN827_A390
product: tRNA-Ser
anticodon: (pos:13426..13428,aa:Ser,seq:tga)
SIO_010081: BN827_A390
subclass of: SO_0000673
so part of: BN827_A390
location: 13392..13476
location: region:13392-13476:1
so has part: feature:13392-13476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13392-13476:1:exon

BN827_A400
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: BN827_A400
so part of: sequence
location: 13507..13812
location: region:13507-13812:1
so has part: feature:13507-13812:1:exon
subclass of: SO_0000010

18158149
type: Gene
SIO_000068: ncbigene

position:13507:1
position: 13507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13812:1
position: 13812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13507-13812:1:exon

BN827_A400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: BN827_A400
note: ORF105
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIFNIHYKLKKNLLFKQFKNNKKIKYIYLKKQINIILKSKNSNNYIYNIIKYKHKNLKTLYIIINKYNLILIKFINFWYILNNYYIEYNKFYLIKTIFTYF
SIO_010081: BN827_A400
subclass of: SO_0000673
so part of: BN827_A400
location: 13507..13812
location: region:13507-13812:1
so has part: feature:13507-13812:1:exon

YP_009272526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13507-13812:1:exon

BN827_A410
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rps2
locus tag: BN827_A410
so part of: sequence
location: complement(13799..14479)
location: region:13799-14479:-1
so has part: feature:13799-14479:-1:exon
subclass of: SO_0000010

18158140
type: Gene
SIO_000068: ncbigene

position:13799:-1
position: 13799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14479:-1
position: 14479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13799-14479:-1:exon

BN827_A410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rps2
locus tag: BN827_A410
codon start: 1
transl table: 11
product: small subunit ribosomal protein 2 (Rps2)
translation: MFITFKDLLKSKIYIGNNYKNIYINNYKFIYKIKYNYCILNFTLIILYLYKLYLYIYNISIFNNKILFIINNNLITNLIINICNLTNNFYIIKWVPGILTNWYMFKKKIIIYLWLEKLFKNNYIITILSKKCLYNLKNIYNKLYKNINGIKNMSILPKHICLLNYNSLIIKEILKLKLILISFINLSLDSSYINIKILGNYNNYKSLKLIYKIIYTSIIHSKIKNM
SIO_010081: BN827_A410
subclass of: SO_0000673
so part of: BN827_A410
location: complement(13799..14479)
location: region:13799-14479:-1
so has part: feature:13799-14479:-1:exon

YP_009272527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13799-14479:-1:exon

BN827_A420
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rpoC2B
locus tag: BN827_A420
so part of: sequence
location: complement(14492..15763)
location: region:14492-15763:-1
so has part: feature:14492-15763:-1:exon
subclass of: SO_0000010

18158141
type: Gene
SIO_000068: ncbigene

position:14492:-1
position: 14492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15763:-1
position: 15763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14492-15763:-1:exon

BN827_A420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rpoC2B
locus tag: BN827_A420
note: A +1 frameshift at the stop codon of the preceding CDS (rpoC2A) may connect the CDS to this.
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit C2 part B (RpoC2B)
translation: MYLISIKKNNLKLNYLYSLNKFIIFKIGIKKIIIYNKNFINNILKYNKFEKYNNYNFYEIIYYNWNKYLLKNNYFNLFIIYNNYIKYLYKYTIKNYLYFIKNLYYINNNFINNSIIYKLNYNIYNNQINKLYDYKKNIYLLFTNSFYNKIFYHYIYNNINNLYLNDITIGLESINIIFENKNIKNNISFISNNIYVIYYVKYYNYLNNIIYIYNVCNINKLNYFKYKLNFYSYIFEDISSILYSGYSLNTDFYLINNNLTYYFKYLLSNINIYQSIKSSYIYVYNILLESIVKQYSYQNIYLPAIYFELIIKKMLSCIKIISNNFNLFKYNDIIPLYLINIINYSLNLNKYKIYKYEPIILGVTKSILANSGFLTNISFQNTFKILSLNILTNKIDWLLDIKSKIIMTDLLPVGNGWYRYLTV
SIO_010081: BN827_A420
subclass of: SO_0000673
so part of: BN827_A420
location: complement(14492..15763)
location: region:14492-15763:-1
so has part: feature:14492-15763:-1:exon

YP_009272528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14492-15763:-1:exon

BN827_A430
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rpoC2A
locus tag: BN827_A430
so part of: sequence
location: complement(15771..17381)
location: region:15771-17381:-1
so has part: feature:15771-17381:-1:exon
subclass of: SO_0000010

18158183
type: Gene
SIO_000068: ncbigene

position:15771:-1
position: 15771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17381:-1
position: 17381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15771-17381:-1:exon

BN827_A430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rpoC2A
locus tag: BN827_A430
note: A +1 frameshift at the stop codon may connect this CDS to the following CDS (rpoC2B).
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit C2 part A (RpoC2A)
translation: MYFYFFNQYNLKILEKKLLSVFKYNISSKLLQELLYLGFEYSFIYNYSLNINDFSNFIYLLILYKNKINKIYNNKYYEIKYNYINIFLNNYYYLKIFNNIQTILNYNIYFKINPIYSNLFLFFNNKIKIKYSQLQQLVGYKGYVSNINGIIYEKPIINNYINELNLYEYILSCFGSKKGIIDTALKTADSGYLTKRLVNITNNFIIKEINCRSPFIFRYKCNMDIYGNIFYPLNLLKFKILQNNIINSDKGIYISFKNIYLTKYILNKLLNLYYVNYINLYIKSVYLCNIFNNICNNCLNYKQLYKYNLGQHIGVISSEAISEPSTQMVLRTFHANSILKYKYNQSVLKRYYIYKLYSYKFKINKIFKFIFNFKIYLNIKFNIIFLLNKLLFKNNINKFYLNYILPNSHIKYNFIYNSISKNFKCNYNNIIIKYIDNFIKYYNYNILQLLIKNSYNKWIIYNLYTYYIYFNYIKLYNINNKGIIYYNNINKKYNILYFIKNLINYNSYYYMNNYINIINNNIKLLNSNNIIFKFNY
SIO_010081: BN827_A430
subclass of: SO_0000673
so part of: BN827_A430
location: complement(15771..17381)
location: region:15771-17381:-1
so has part: feature:15771-17381:-1:exon

YP_009272529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15771-17381:-1:exon

BN827_A440
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rpoC1
locus tag: BN827_A440
so part of: sequence
location: complement(17401..19125)
location: region:17401-19125:-1
so has part: feature:17401-19125:-1:exon
subclass of: SO_0000010

18158177
type: Gene
SIO_000068: ncbigene

position:17401:-1
position: 17401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19125:-1
position: 19125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17401-19125:-1:exon

BN827_A440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rpoC1
locus tag: BN827_A440
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit C1 (RpoC1)
translation: MILYNNINFIGLKLNILNPKQIIKWSSIIYKNKVIIGEVLIPNTINFNTGLPILNGLFCEKIFDYMYIWNCNCNKKLYDINNYSFFLYCKFCKNKLKININRKYKLGFIFLNIPILHLWYLTGPLKVASLLLNKNISYLKYLIYYKYFFNNIKYKQYFYYNKLNFKSIKINILSTNIISYLFSHNILYKKLKNLNLLVELLNNKELLLINNKYFKKDLYKKINLLNLFIINNIKPNWIFLDLLPILPAGLRPYFYINNNMYIISTINENYRLIILKNNKLKYWLYLRNNICFIFEIIEKRLLQQLIDYLLINKLILKNNNTFFNFSKIFQGKYSVIKYNLLGKRVDFSGRSVITVSPNIRYNNIGLPYYISINIFKPFLIKIFKNNNKFNIIFKSLLINKNLFIIKKFLNKLLQNQFVIINRAPTLHRMNLQSFIPMLTEGYSLKFYPLGCASFNADFDGDQMSIFLPLIKTSKFEANLNLNFDKNIISPSNNKNLFKNLQYYKLGINTLLNLNYNKLFNIYYFNSMDKIYELYINNRLNMFNLVWIKYINNNKIFYILTSVSRIILNLYMYIY
SIO_010081: BN827_A440
subclass of: SO_0000673
so part of: BN827_A440
location: complement(17401..19125)
location: region:17401-19125:-1
so has part: feature:17401-19125:-1:exon

YP_009272530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17401-19125:-1:exon

BN827_A450
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rpoB
locus tag: BN827_A450
so part of: sequence
location: complement(19128..22184)
location: region:19128-22184:-1
so has part: feature:19128-22184:-1:exon
subclass of: SO_0000010

18158165
type: Gene
SIO_000068: ncbigene

position:19128:-1
position: 19128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22184:-1
position: 22184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19128-22184:-1:exon

BN827_A450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: rpoB
locus tag: BN827_A450
codon start: 1
transl table: 11
product: DNA-directed RNA polymerase subunit B (RpoB)
translation: MIYLLYPNSIKNNYVISNLYLLLILEILYNLKYYILIINNSFKNDFNIIYFKLITLLTNININSIDTIQTINNLFKIILHLNFKFIFLKKNIRVNMLIFILPLIYNNTIILNGLYKTCIQLLKKNNKIFIIKFKKNNINIIYLYIYININLKLILEFNNTNIYCYLNNYKFNFIILLLYLNTNLNICIKSYNYVLKKIIIYNYLKFLMYNTYNIYNIILLKLFILKINNNILFLNDIFKIILNIKFNFIYYINYILDNIYNKKFYSVIEHLSFKCNIYINILKDQLLNFTKNLNINILLNNKKYINIILENININPLIQYSDQTNYLSEINQKFKINMVTTGLNSKLILNNNLRELPRNVLGYISLINTNEGLTCGLVNYLTINTNLNIKYKFTTYYKYLFYNKYNFKLILDIFDKNFYNIYFNKIYLKKNINFNKNIILTINKNTFKINNIIKNIIYIPFTYLLSFIENLIPFIHYNDSIRNLMSIKMHTQVVPILYPTLSSIITNYNFIINKYLNYSIVSYQEGIVIYVSYIKIIIRDIFNRQIIYYLNNFKKLNQNILLTYKPIVWVGERINIGKILAVNSNLLYSEYSLGNNLLVGYGSYLGYEYEDAVIINKKILYNNLYTSLHLNIYEVSLNIINNIPEICSINLPKLYNIHKKYLDKYGIIKEGTFLLPNTILVSKLIFMPFIFNNKSLVNIINFLFGSKLRIFKNKPVISTINDIGRIIKIEVLSNYLYNKVKNNNIYLKIRIYIGIQKYLQLGDKICNRHGHKGVISYINDINDMPYLNNKIQPDLFVSAIGIPSRINIGQILEGIYGLNSLYLNNRYIISNNLNNNYYNNYINSFNYYKYNYSNNFEFNKISYNYNKYFLKNPFTGHLIHNSVCLNNIYYYKLIHMVKDKLRYRFIGLYSELTQQPIKGNTKQGGQRFGEMEVWALEAFGASFLFKEFFTYKSDDIKSRKLLKNYLFNHNKIKNTFISETFKLIIKELQSLAINIETFCVYNDQNSNLIEKLPINIIY
SIO_010081: BN827_A450
subclass of: SO_0000673
so part of: BN827_A450
location: complement(19128..22184)
location: region:19128-22184:-1
so has part: feature:19128-22184:-1:exon

YP_009272531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19128-22184:-1:exon

BN827_A460
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: BN827_A460
so part of: sequence
location: complement(22181..22498)
location: region:22181-22498:-1
so has part: feature:22181-22498:-1:exon
subclass of: SO_0000010

18158171
type: Gene
SIO_000068: ncbigene

position:22181:-1
position: 22181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22498:-1
position: 22498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22181-22498:-1:exon

BN827_A460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: BN827_A460
note: ORF101
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKINIIKYYYNKYKILNKNVIKNNNNNFILNYSSIIKLYFYEYIKNNLQIFSFKGLLLNKYKKNNNIIIIKYDNYNIIFLYFYLNSKNLINIFKIGKLNLNKILL
SIO_010081: BN827_A460
subclass of: SO_0000673
so part of: BN827_A460
location: complement(22181..22498)
location: region:22181-22498:-1
so has part: feature:22181-22498:-1:exon

YP_009272532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22181-22498:-1:exon

BN827_A470
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
locus tag: BN827_A470
so part of: sequence
location: complement(22525..22653)
location: region:22525-22653:-1
so has part: feature:22525-22653:-1:exon
subclass of: SO_0000010

18158168
type: Gene
SIO_000068: ncbigene

position:22525:-1
position: 22525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22653:-1
position: 22653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22525-22653:-1:exon

BN827_A470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
locus tag: BN827_A470
note: ORF51
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNYLNRYKKILKYNKNRIKLKYILYKKYILIIKRFRYLNII
SIO_010081: BN827_A470
subclass of: SO_0000673
so part of: BN827_A470
location: complement(22525..22653)
location: region:22525-22653:-1
so has part: feature:22525-22653:-1:exon

YP_009272533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22525-22653:-1:exon

BN827_A480
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: sufB
locus tag: BN827_A480
so part of: sequence
location: complement(22661..24082)
location: region:22661-24082:-1
so has part: feature:22661-24082:-1:exon
subclass of: SO_0000010

18158148
type: Gene
SIO_000068: ncbigene

position:22661:-1
position: 22661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24082:-1
position: 24082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22661-24082:-1:exon

BN827_A480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31271
gene: sufB
locus tag: BN827_A480
codon start: 1
transl table: 11
product: cysteine desulfurase activator complex subunit SufB (SufB)
translation: MINKLKLKNFLNIYNLNYKYQYNNKINLYLIRNGLNKNLIKNLSNNIYLYFFIYKFKIYSLKFLNIFKLPDWSFFECPNINYDNIIYYSSILKDSNLLLYLKTNLNINFLDTILIKNNSIDVIFDSISVLHTTQYFLKKLGIIFLSLFDVILKYPLLIKKYLGTVVSYKDNFFANINSIIFSEGSFCYISKYIKCNFNLSTYFKTNSYDFAQFERTLLIASEFSYVGYLEGCTALMYKESQLHIAIVEIIVKNYGYVKYYTLQNWYRGDYLGNGGLYNFTTKRGICFYFAKLDWIQIELGSIITWKYPSTILKGNYSISNFYSISFISDTQIADTGSKIYHIGSYTKSYIISKSISLNKSLNIFRGLVYIKPNSYRSYNYTECSSLIFGNNSLTITIPYIKNYNNTSVIKQEAFISKIEILYLFLLMQRGLSISDSISLIIIGFCSSIYNKLPFELNLEIPILFSLKVKDILK
SIO_010081: BN827_A480
subclass of: SO_0000673
so part of: BN827_A480
location: complement(22661..24082)
location: region:22661-24082:-1
so has part: feature:22661-24082:-1:exon

YP_009272534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22661-24082:-1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 31271
rpt family: SIR2
rpt type: INVERTED
so part of: sequence
location: complement(24075..24362)
location: region:24075-24362:-1
so has part: feature:24075-24362:-1:region

position:24075:-1
position: 24075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24362:-1
position: 24362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24075-24362:-1:region

BN827_A490
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Thr (UGU)1
locus tag: BN827_A490
so part of: sequence
location: complement(24109..24181)
location: region:24109-24181:-1
so has part: feature:24109-24181:-1:exon
subclass of: SO_0000663

18158154
type: Gene
SIO_000068: ncbigene

position:24109:-1
position: 24109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24181:-1
position: 24181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24109-24181:-1:exon

BN827_A490
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Thr (UGU)1
locus tag: BN827_A490
product: tRNA-Thr
note: T28
anticodon: (pos:complement(24146..24148),aa:Thr,seq:tgt)
SIO_010081: BN827_A490
subclass of: SO_0000673
so part of: BN827_A490
location: complement(24109..24181)
location: region:24109-24181:-1
so has part: feature:24109-24181:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24109-24181:-1:exon

BN827_A500
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rrl
locus tag: BN827_A500
so part of: sequence
location: complement(24195..26887)
location: region:24195-26887:-1
so has part: feature:24195-26887:-1:exon
subclass of: SO_0000573

18158152
type: Gene
SIO_000068: ncbigene

position:24195:-1
position: 24195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26887:-1
position: 26887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24195-26887:-1:exon

BN827_A500
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 31271
gene: rrl
locus tag: BN827_A500
product: large subunit ribosomal RNA
SIO_010081: BN827_A500
subclass of: SO_0000673
so part of: BN827_A500
location: complement(24195..26887)
location: region:24195-26887:-1
so has part: feature:24195-26887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24195-26887:-1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 31271
rpt family: SIR1
rpt type: INVERTED
so part of: sequence
location: complement(26900..27070)
location: region:26900-27070:-1
so has part: feature:26900-27070:-1:region

position:26900:-1
position: 26900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27070:-1
position: 27070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26900-27070:-1:region

BN827_A510
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Met (CAU)1
locus tag: BN827_A510
so part of: sequence
location: complement(26930..27003)
location: region:26930-27003:-1
so has part: feature:26930-27003:-1:exon
subclass of: SO_0000663

18158156
type: Gene
SIO_000068: ncbigene

position:26930:-1
position: 26930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27003:-1
position: 27003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26930-27003:-1:exon

BN827_A510
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Met (CAU)1
locus tag: BN827_A510
product: tRNA-Met
anticodon: (pos:complement(26967..26969),aa:Met,seq:cat)
SIO_010081: BN827_A510
subclass of: SO_0000673
so part of: BN827_A510
location: complement(26930..27003)
location: region:26930-27003:-1
so has part: feature:26930-27003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26930-27003:-1:exon

BN827_A520
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Arg (ACG)*
locus tag: BN827_A520
pseudo: true
so part of: sequence
location: complement(27013..27063)
location: region:27013-27063:-1
so has part: feature:27013-27063:-1:exon
subclass of: SO_0000663

18158173
type: Gene
SIO_000068: ncbigene

position:27013:-1
position: 27013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27063:-1
position: 27063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27013-27063:-1:exon

BN827_A520
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Arg (ACG)*
locus tag: BN827_A520
pseudo: true
SIO_010081: BN827_A520
subclass of: SO_0000673
so part of: BN827_A520
location: complement(27013..27063)
location: region:27013-27063:-1
so has part: feature:27013-27063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27013-27063:-1:exon

BN827_A530
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Val (UAC)
locus tag: BN827_A530
so part of: sequence
location: 27088..27159
location: region:27088-27159:1
so has part: feature:27088-27159:1:exon
subclass of: SO_0000663

18158150
type: Gene
SIO_000068: ncbigene

position:27088:1
position: 27088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27159:1
position: 27159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27088-27159:1:exon

BN827_A530
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Val (UAC)
locus tag: BN827_A530
product: tRNA-Val
anticodon: (pos:27120..27122,aa:Val,seq:tac)
SIO_010081: BN827_A530
subclass of: SO_0000673
so part of: BN827_A530
location: 27088..27159
location: region:27088-27159:1
so has part: feature:27088-27159:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27088-27159:1:exon

BN827_A540
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Arg (UCU)
locus tag: BN827_A540
so part of: sequence
location: 27163..27234
location: region:27163-27234:1
so has part: feature:27163-27234:1:exon
subclass of: SO_0000663

18158174
type: Gene
SIO_000068: ncbigene

position:27163:1
position: 27163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27234:1
position: 27234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27163-27234:1:exon

BN827_A540
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Arg (UCU)
locus tag: BN827_A540
product: tRNA-Arg
anticodon: (pos:27196..27198,aa:Arg,seq:tct)
SIO_010081: BN827_A540
subclass of: SO_0000673
so part of: BN827_A540
location: 27163..27234
location: region:27163-27234:1
so has part: feature:27163-27234:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27163-27234:1:exon

BN827_A550
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Leu (UAG)
locus tag: BN827_A550
so part of: sequence
location: 27242..27318
location: region:27242-27318:1
so has part: feature:27242-27318:1:exon
subclass of: SO_0000663

18158151
type: Gene
SIO_000068: ncbigene

position:27242:1
position: 27242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27318:1
position: 27318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27242-27318:1:exon

BN827_A550
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Leu (UAG)
locus tag: BN827_A550
product: tRNA-Leu
anticodon: (pos:27275..27277,aa:Leu,seq:tag)
SIO_010081: BN827_A550
subclass of: SO_0000673
so part of: BN827_A550
location: 27242..27318
location: region:27242-27318:1
so has part: feature:27242-27318:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27242-27318:1:exon

BN827_A560
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Asn (GUU)
locus tag: BN827_A560
so part of: sequence
location: complement(27330..27401)
location: region:27330-27401:-1
so has part: feature:27330-27401:-1:exon
subclass of: SO_0000663

18158178
type: Gene
SIO_000068: ncbigene

position:27330:-1
position: 27330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27401:-1
position: 27401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27330-27401:-1:exon

BN827_A560
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Asn (GUU)
locus tag: BN827_A560
product: tRNA-Asn
anticodon: (pos:complement(27366..27368),aa:Asn,seq:gtt)
SIO_010081: BN827_A560
subclass of: SO_0000673
so part of: BN827_A560
location: complement(27330..27401)
location: region:27330-27401:-1
so has part: feature:27330-27401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27330-27401:-1:exon

BN827_A570
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Ala (UGC)
locus tag: BN827_A570
so part of: sequence
location: 27431..27501
location: region:27431-27501:1
so has part: feature:27431-27501:1:exon
subclass of: SO_0000663

18158176
type: Gene
SIO_000068: ncbigene

position:27431:1
position: 27431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27501:1
position: 27501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27431-27501:1:exon

BN827_A570
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Ala (UGC)
locus tag: BN827_A570
product: tRNA-Ala
anticodon: (pos:27463..27465,aa:Ala,seq:tgc)
SIO_010081: BN827_A570
subclass of: SO_0000673
so part of: BN827_A570
location: 27431..27501
location: region:27431-27501:1
so has part: feature:27431-27501:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27431-27501:1:exon

BN827_A580
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: rrs
locus tag: BN827_A580
so part of: sequence
location: 27548..28987
location: region:27548-28987:1
so has part: feature:27548-28987:1:exon
subclass of: SO_0000573

18158179
type: Gene
SIO_000068: ncbigene

position:27548:1
position: 27548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28987:1
position: 28987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27548-28987:1:exon

BN827_A580
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 31271
gene: rrs
locus tag: BN827_A580
product: small subunit ribosomal RNA
SIO_010081: BN827_A580
subclass of: SO_0000673
so part of: BN827_A580
location: 27548..28987
location: region:27548-28987:1
so has part: feature:27548-28987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27548-28987:1:exon

BN827_A590
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Ile (GAU)
locus tag: BN827_A590
so part of: sequence
location: 29115..29185
location: region:29115-29185:1
so has part: feature:29115-29185:1:exon
subclass of: SO_0000663

18158139
type: Gene
SIO_000068: ncbigene

position:29115:1
position: 29115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29185:1
position: 29185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29115-29185:1:exon

BN827_A590
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Ile (GAU)
locus tag: BN827_A590
product: tRNA-Ile
anticodon: (pos:29147..29149,aa:Ile,seq:gat)
SIO_010081: BN827_A590
subclass of: SO_0000673
so part of: BN827_A590
location: 29115..29185
location: region:29115-29185:1
so has part: feature:29115-29185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29115-29185:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 31271
rpt family: SIR1
rpt type: INVERTED
so part of: sequence
location: 29243..29433
location: region:29243-29433:1
so has part: feature:29243-29433:1:region

position:29243:1
position: 29243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29433:1
position: 29433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29243-29433:1:region

BN827_A600
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Arg (ACG)
locus tag: BN827_A600
so part of: sequence
location: 29250..29321
location: region:29250-29321:1
so has part: feature:29250-29321:1:exon
subclass of: SO_0000663

18158143
type: Gene
SIO_000068: ncbigene

position:29250:1
position: 29250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29321:1
position: 29321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29250-29321:1:exon

BN827_A600
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Arg (ACG)
locus tag: BN827_A600
product: tRNA-Arg
anticodon: (pos:29283..29285,aa:Arg,seq:acg)
SIO_010081: BN827_A600
subclass of: SO_0000673
so part of: BN827_A600
location: 29250..29321
location: region:29250-29321:1
so has part: feature:29250-29321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29250-29321:1:exon

BN827_A610
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: tRNA-Met (CAU)2
locus tag: BN827_A610
so part of: sequence
location: 29331..29404
location: region:29331-29404:1
so has part: feature:29331-29404:1:exon
subclass of: SO_0000663

18158142
type: Gene
SIO_000068: ncbigene

position:29331:1
position: 29331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29404:1
position: 29404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29331-29404:1:exon

BN827_A610
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31271
gene: tRNA-Met (CAU)2
locus tag: BN827_A610
product: tRNA-Met
anticodon: (pos:29365..29367,aa:Met,seq:cat)
SIO_010081: BN827_A610
subclass of: SO_0000673
so part of: BN827_A610
location: 29331..29404
location: region:29331-29404:1
so has part: feature:29331-29404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29331-29404:1:exon

BN827_A620
type: Gene
subclass of: SO_0000704
RO_0002162: 31271
gene: 'rrl
locus tag: BN827_A620
pseudo: true
so part of: sequence
location: 29443..29610
location: region:29443-29610:1
so has part: feature:29443-29610:1:exon
subclass of: SO_0000573

18158145
type: Gene
SIO_000068: ncbigene

position:29610:1
position: 29610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29443-29610:1:exon

BN827_A620
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 31271
gene: 'rrl
locus tag: BN827_A620
product: large subunit ribosomal RNA (5' truncated)
pseudo: true
SIO_010081: BN827_A620
subclass of: SO_0000673
so part of: BN827_A620
location: 29443..29610
location: region:29443-29610:1
so has part: feature:29443-29610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29443-29610:1:exon