Allorhizobium ampelinum S4 plasmid pAtS4b, complete sequence.
type: Entry
definition: Allorhizobium ampelinum S4 plasmid pAtS4b, complete sequence.
sequence version: NC_011991.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NC_011991.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02602976
keyword: RefSeq
source: Allorhizobium ampelinum S4
organism: Allorhizobium ampelinum S4
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Allorhizobium; Allorhizobium ampelinum.
reference: 1
references: 19251847
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP000635.1.\nStrain/DNA available from Tom Burr, Cornell University,\ntjb1@cornell.edu. A. vitis S4 was isolated by Dr. Erno Szegedi in\n1981 from aerial gall that developed on a two-year-old woody\ngrapevine cane.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 19:47:51\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,800\nCDSs (total) :: 5,729\nGenes (coding) :: 5,554\nCDSs (with protein) :: 5,554\nGenes (RNA) :: 71\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 4\nPseudo Genes (total) :: 175\nCDSs (without protein) :: 175\nPseudo Genes (ambiguous residues) :: 0 of 175\nPseudo Genes (frameshifted) :: 82 of 175\nPseudo Genes (incomplete) :: 122 of 175\nPseudo Genes (internal stop) :: 28 of 175\nPseudo Genes (multiple problems) :: 52 of 175\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 130435
topology: circular
so has quality: SO_0000988
location: 1..130435
location: region:1-130435:1
RO_0002162: 311402

NC_011991
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02602976
type: BioSample
SIO_000068: biosample

1
title: Genome sequences of three agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria
author: Slater, S.C.
author: Goldman, B.S.
author: Goodner, B.
author: Setubal, J.C.
author: Farrand, S.K.
author: Nester, E.W.
author: Burr, T.J.
author: Banta, L.
author: Dickerman, A.W.
author: Paulsen, I.
author: Otten, L.
author: Suen, G.
author: Welch, R.
author: Almeida, N.F.
author: Arnold, F.
author: Burton, O.T.
author: Du, Z.
author: Ewing, A.
author: Godsy, E.
author: Heisel, S.
author: Houmiel, K.L.
author: Jhaveri, J.
author: Lu, J.
author: Miller, N.M.
author: Norton, S.
author: Chen, Q.
author: Phoolcharoen, W.
author: Ohlin, V.
author: Ondrusek, D.
author: Pride, N.
author: Stricklin, S.L.
author: Sun, J.
author: Wheeler, C.
author: Wilson, L.
author: Zhu, H.
author: Wood, D.W.
journal: J Bacteriol
volume: 191
issue: 8
pages: 2501-2511
year: 2009
pubmed: 19251847

19251847
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Setubal, J.
author: Wood, D.
author: Slater, S.
author: Nester, E.
author: Farrand, S.
author: Goldman, B.
author: Burr, T.
author: Goodner, B.
author: Otten, L.
author: Dickerman, A.
author: Almeida, N.
author: Sun, J.
author: Jhaveri, J.
author: Banta, L.
author: Houmiel, K.
journal: Submitted (14-MAR-2007) Virginia Bioinformatics Institute, Virginia Tech, Washington Street, Box 0477, Blacksburg, VA 24061, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130435:1
position: 130435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-130435:1:source
so part of: sequence
organism: Allorhizobium ampelinum S4
mol type: genomic DNA
strain: S4
isolate: Kecskemet-Hungary; ATCC BAA-846
host: Vitis vinifera cv. 'Izsaki Sarfeher'
culture collection: ATCC:BAA-846
type material: type strain of Allorhizobium ampelinum
plasmid: pAtS4b
country: Hungary: Orgovany

311402
type: Taxonomy
SIO_000068: taxonomy

AVI_RS22920
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: repA
locus tag: AVI_RS22920
old locus tag: Avi_9501
so part of: sequence
location: 279..1496
location: region:279-1496:1
so has part: feature:279-1496:1:exon
subclass of: SO_0000010

position:279:1
position: 279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1496:1
position: 1496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279-1496:1:exon

AVI_RS22920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: repA
locus tag: AVI_RS22920
old locus tag: Avi_9501
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009109568.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepA
translation: MAIKTANSTAAGKIERVSIDKTIADDAAKLSSNLQELSARLFSPDAQKALRRFSSTEAAKLLGVTDSYVRHLAAQEDSVTSEKTSAGRRTFSLSEINTIRQLLGKTKPAYLAGRREADHLQVIAVTNFKGGSGKTTTSTHLAQYLALRGYRVLAVDLDPQASMSAMLGYQPEFDVGENETLFGAIRYDDLRRPVGEVVRETYFPGLDLIPGNLELHEFEHDTPRALAERNGSETDMFFMRVGNALADLSERYDVVVIDCPPTLGFLTLSALCAATAVLITVHPQMLDVASMNQFLAMTSDLLSVVKEAGGNLEYDWMRYLVTRYEPNDGPQAQIVAFLRSLFGDRVLTSMMVKSTAISDAGLSKQTIYEAARETMNRQTYDRAVEAMDGVNLEVEALLKSSWGRA
SIO_010081: AVI_RS22920
subclass of: SO_0000673
so part of: AVI_RS22920
location: 279..1496
location: region:279-1496:1
so has part: feature:279-1496:1:exon

WP_012655017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279-1496:1:exon

AVI_RS22925
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: repB
locus tag: AVI_RS22925
old locus tag: Avi_9502
so part of: sequence
location: 1493..2491
location: region:1493-2491:1
so has part: feature:1493-2491:1:exon
subclass of: SO_0000010

position:1493:1
position: 1493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2491:1
position: 2491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493-2491:1:exon

AVI_RS22925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: repB
locus tag: AVI_RS22925
old locus tag: Avi_9502
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009109570.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepB
translation: MKGRDILKNMVSSAGDEAPKASVQSHPQHKPAGAVRAMNLSLGRLGDEAAAAKELRYALAAGDKVVELSPGQIEASFIQDRIPTNNDAALEELIASMRQSGQQVPILVRPHPSKENHYQAAYGHRRLRAAIALERPIRAIVRQLSDEELIVAQGQENGPRIDLSFIERALFAKRLLQHGFDRDRISQALSVDKPETSRLLQVADAIPTDIILAIGPASKIGRPRWLAFAELLKDKAAADRIADTVAEAQFGAIDTNERFARLWAQAQGPKASKKDTGGKIRTRKGIVLASMERTAKGAKITVTSEEFAQFLDARMSDLVEQFEKENSSETNH
SIO_010081: AVI_RS22925
subclass of: SO_0000673
so part of: AVI_RS22925
location: 1493..2491
location: region:1493-2491:1
so has part: feature:1493-2491:1:exon

WP_012655018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1493-2491:1:exon

AVI_RS22930
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: repC
locus tag: AVI_RS22930
old locus tag: Avi_9503
so part of: sequence
location: 2689..3903
location: region:2689-3903:1
so has part: feature:2689-3903:1:exon
subclass of: SO_0000010

position:2689:1
position: 2689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3903:1
position: 3903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2689-3903:1:exon

AVI_RS22930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: repC
locus tag: AVI_RS22930
old locus tag: Avi_9503
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012653007.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: MHTGNVTTPFGRRPMTLALVKRQIADTEIRSGKSADKWMIFRDVKEARETYKLPPYSIAVLDALLTFYPEKELRQDAQLIVFPSNAQLMVRANGMSGATLRRHLAILVDVGMIVRKDSPNGKRYARKDGSGEIERAFGFDLSPLLARSEEFALAAQQVATDRREFLKAKESLTLCRRDVRKVISAAIEEGAEGDWEAVESVYLDIVRRIPRTPSASDLAQVLDELQLLFDEVINRLDLVDNSEDISSNAAQSERHIQNSKTESINELEHSSENKQGAKPSETGRPKREPVKAFPLGMVLRACPQISDYGPGGQIASWRDLMSAAVVARSMLGVSPSAYQTACETLGPENAAAVMACILERGGHINSAGGYLRALTQRAEKGEFSLGPMLMALTRANAGNDRQAG
SIO_010081: AVI_RS22930
subclass of: SO_0000673
so part of: AVI_RS22930
location: 2689..3903
location: region:2689-3903:1
so has part: feature:2689-3903:1:exon

WP_041699154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2689-3903:1:exon

AVI_RS22935
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS22935
old locus tag: Avi_9504
so part of: sequence
location: complement(3932..4753)
location: region:3932-4753:-1
so has part: feature:3932-4753:-1:exon
subclass of: SO_0000010

position:3932:-1
position: 3932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4753:-1
position: 4753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3932-4753:-1:exon

AVI_RS22935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS22935
old locus tag: Avi_9504
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003498570.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MMSEKTITTSHGQIAIYDTPGGEIPLLMIHANSVCKETFHFQIEALAGKYRIIAIDLPGHGQSSDAIDPLRTYNFNGYADAICEVIEALGVDRFAILGHSLGGHVALELMRLLPEKTAGTMIFGTPPIPPGPEGAALGFLPNPEFAYTGKQILSEQEIDMVVALALGSDAVHDTFWKSAVRRTDGRSRELMIDAALAGRHSDQRALVETSAVPLAIVNGADDPVINLDYIDNLTYGNLWNRGAVRVENAGHGLHWQRHKEFNVLLDNFLTSVA
SIO_010081: AVI_RS22935
subclass of: SO_0000673
so part of: AVI_RS22935
location: complement(3932..4753)
location: region:3932-4753:-1
so has part: feature:3932-4753:-1:exon

WP_244427795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3932-4753:-1:exon

AVI_RS22940
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS22940
old locus tag: Avi_9505
so part of: sequence
location: 4998..5690
location: region:4998-5690:1
so has part: feature:4998-5690:1:exon
subclass of: SO_0000010

position:4998:1
position: 4998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5690:1
position: 5690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4998-5690:1:exon

AVI_RS22940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS22940
old locus tag: Avi_9505
EC number: 2.7.7.65
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007763662.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF domain-containing protein
translation: MLASLAISFSIVPLLGGQVAGAGLFMTIFCPLAISIPASALHFTQSEKVRRAEAATKEALNKLADAYETLRIQSRRDGLTGALTRSAFMEDLALTSQRGGTGALLFLDLDHFKSINDRYGHATGDEALRRTGLVLARYKSQSDVAGRLGGEEFGLFQSDLKFEQMRDRCEEVREEIARIVLHAPSGSQVRISASIGACHCDPGFDLSDCLKAADKNLYQAKALGRNRVVA
SIO_010081: AVI_RS22940
subclass of: SO_0000673
so part of: AVI_RS22940
location: 4998..5690
location: region:4998-5690:1
so has part: feature:4998-5690:1:exon

WP_244427801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4998-5690:1:exon

AVI_RS22945
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS22945
old locus tag: Avi_9506
so part of: sequence
location: 5858..6244
location: region:5858-6244:1
so has part: feature:5858-6244:1:exon
subclass of: SO_0000010

position:5858:1
position: 5858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6244:1
position: 6244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5858-6244:1:exon

AVI_RS22945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS22945
old locus tag: Avi_9506
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008872104.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAQALMAHTSVVSGFVDSLQEPRTPYISPKRLSKALGVPVTGMAELTGVHRNTLRNPSSERLQGRMREMIKVISAAAELTGALEKAVYWYRNEPIRDYDHKTAAELVADGQVEAVLAYIRDLTNGARG
SIO_010081: AVI_RS22945
subclass of: SO_0000673
so part of: AVI_RS22945
location: 5858..6244
location: region:5858-6244:1
so has part: feature:5858-6244:1:exon

WP_012655022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5858-6244:1:exon

AVI_RS22950
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS22950
old locus tag: Avi_9507
so part of: sequence
location: 6241..6768
location: region:6241-6768:1
so has part: feature:6241-6768:1:exon
subclass of: SO_0000010

position:6241:1
position: 6241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6768:1
position: 6768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6241-6768:1:exon

AVI_RS22950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS22950
old locus tag: Avi_9507
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013525336.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RES family NAD+ phosphorylase
translation: MKLTRLGPPGEVFHRFLTPRWSHLPTSGAGAAADGGRFNRPGIEALYLSRAPQTALEEYRQGASITPPATLAAYSVVLDRVADLSGGFDPLLWDATWAEWDCPWRRIVRIDRKIPASWKLSDIVISAGYKGILFPSLRHAGGTNLVVFSANLIDDDTVEVHDPDGRLPKDQSSWP
SIO_010081: AVI_RS22950
subclass of: SO_0000673
so part of: AVI_RS22950
location: 6241..6768
location: region:6241-6768:1
so has part: feature:6241-6768:1:exon

WP_012655023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6241-6768:1:exon

AVI_RS22955
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS22955
old locus tag: Avi_9508
so part of: sequence
location: 6832..7143
location: region:6832-7143:1
so has part: feature:6832-7143:1:exon
subclass of: SO_0000010

position:6832:1
position: 6832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7143:1
position: 7143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6832-7143:1:exon

AVI_RS22955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS22955
old locus tag: Avi_9508
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011993085.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSEEREAFERLLKLAQSDTGQAGRAADFVLAWWNADSLGGFDLPDLFGVDMAIGVDRATVFTYLAGRQDAVYPEEYRSQTEAIIQQWRPGARAKSHSAAQAG
SIO_010081: AVI_RS22955
subclass of: SO_0000673
so part of: AVI_RS22955
location: 6832..7143
location: region:6832-7143:1
so has part: feature:6832-7143:1:exon

WP_012655024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6832-7143:1:exon

AVI_RS22960
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS22960
old locus tag: Avi_9510
so part of: sequence
location: complement(7190..8356)
location: region:7190-8356:-1
so has part: feature:7190-8356:-1:exon
subclass of: SO_0000010

position:7190:-1
position: 7190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8356:-1
position: 8356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7190-8356:-1:exon

AVI_RS22960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS22960
old locus tag: Avi_9510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017271252.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MSTDLSLSGNDVLRRAEELDALDAILPFDRRDQLAELLTDDDVATLKHLASEGMGDNTMRALASDLAYLEAWCVLATGTPLPWPAPESLLLKFVAHHLWDPAERETNADHGMPEDVAIALRVKGLLRSTGPHAPATVRRRLTSWSILTRWRGLTGSFSAPSLKSALRLAVRASNRPRQRKSKKAVTGDILAKLLTACAGDRLVDLRDRALLLMAFASGGRRRSEVAGLRVEDLMEEEPVRANPSDELSPLLPCLTIRLGRTKTTSADDDEHVVLIGRPVTALKHWLEQAKIEAGPVFRRIDQWGNLDRHALTPQSVNLILKTRIAQAGLDPMQFSAHGLRSGYLTEAANRGIPLPEAMQQSLHKSVTQASGYYNNTERKLGRAARLVL
SIO_010081: AVI_RS22960
subclass of: SO_0000673
so part of: AVI_RS22960
location: complement(7190..8356)
location: region:7190-8356:-1
so has part: feature:7190-8356:-1:exon

WP_049777411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7190-8356:-1:exon

AVI_RS22965
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS22965
old locus tag: Avi_9511
so part of: sequence
location: complement(8346..8765)
location: region:8346-8765:-1
so has part: feature:8346-8765:-1:exon
subclass of: SO_0000010

position:8346:-1
position: 8346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8765:-1
position: 8765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8346-8765:-1:exon

AVI_RS22965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS22965
old locus tag: Avi_9511
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014332783.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MSFVLDASIAAAWFLPDEQHDAADRLMSEIRSTVGLVPALFWFETRNLFLVAERRGRLRPGEPILLMTQLRGLPLEDAGSGGDGLVLELAARHTLTAYDASYVALARTQGLPLATGDRKMATAARGEGITVVGPLEHEH
SIO_010081: AVI_RS22965
subclass of: SO_0000673
so part of: AVI_RS22965
location: complement(8346..8765)
location: region:8346-8765:-1
so has part: feature:8346-8765:-1:exon

WP_012655026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8346-8765:-1:exon

AVI_RS22970
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS22970
so part of: sequence
location: complement(8765..9007)
location: region:8765-9007:-1
so has part: feature:8765-9007:-1:exon
subclass of: SO_0000010

position:9007:-1
position: 9007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8765-9007:-1:exon

AVI_RS22970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS22970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013845224.1
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
translation: MTVTVKVAEAKTHLSDLLAKVEAGEEVIISRGNTPVARLTRIRRDNDVEALIAEIKAQRVGRPVTTQDEIREWRDEGRRY
SIO_010081: AVI_RS22970
subclass of: SO_0000673
so part of: AVI_RS22970
location: complement(8765..9007)
location: region:8765-9007:-1
so has part: feature:8765-9007:-1:exon

WP_041699156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8765-9007:-1:exon

AVI_RS22975
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS22975
old locus tag: Avi_9513
so part of: sequence
location: 9238..10335
location: region:9238-10335:1
so has part: feature:9238-10335:1:exon
subclass of: SO_0000010

position:9238:1
position: 9238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10335:1
position: 10335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9238-10335:1:exon

AVI_RS22975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS22975
old locus tag: Avi_9513
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020809218.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RHE_PE00001 family protein
translation: MSYDIGAIDLRALILPAAQAGEALARLDERIARSPIRDGFLERQNFADAIASLWIDGELVHLEDLVLHDARLDIRTPTHELTIAHSILRARRQIFSHPPDWALSVAGIARLRGRGGVDDDAPLKPRLPLADYEDDNHLALDDRDHNDDFADIDTVLARSAAVLDGSTIIRPLATRDPLIYEEDWDEDERLEQWRSLFIETEGLPPVLRSALLLDAWNRIEVLQHRAELGRQLVASLLRRDGTTPAHLPALNIGLRSVRRERRHAGSQLTRTLAILDAFTAAAELGMKEHDRIVLARQQLDRQASARSVNSKLSRLVDLVVARPVVSATMIAQELGVTPQGARHLAAQLPLREMTGRGRFRAWGVI
SIO_010081: AVI_RS22975
subclass of: SO_0000673
so part of: AVI_RS22975
location: 9238..10335
location: region:9238-10335:1
so has part: feature:9238-10335:1:exon

WP_012655027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9238-10335:1:exon

AVI_RS22980
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS22980
old locus tag: Avi_9514
so part of: sequence
location: complement(10397..10969)
location: region:10397-10969:-1
so has part: feature:10397-10969:-1:exon
subclass of: SO_0000010

position:10397:-1
position: 10397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10969:-1
position: 10969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10397-10969:-1:exon

AVI_RS22980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS22980
old locus tag: Avi_9514
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQEDIAVKFDQQLAYLEQDIRYYRKRSNFFDFLHTVTMIVVLLSSFAATISFVGEIFSDNYIKLMLGLLGFLNVFVTALDAVIGFSKHARKHDDSFKQASRLHLKMTERSIIAATQEDYNELFSQYNEIRIENPPIYKALRAICYNEVLEVNNWEPEGKIIIPEPKRVFAAFFQFSSWSPKRVGELTPSR
SIO_010081: AVI_RS22980
subclass of: SO_0000673
so part of: AVI_RS22980
location: complement(10397..10969)
location: region:10397-10969:-1
so has part: feature:10397-10969:-1:exon

WP_012655028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10397-10969:-1:exon

AVI_RS22985
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: rpsB
locus tag: AVI_RS22985
old locus tag: Avi_9516
pseudo: true
so part of: sequence
location: complement(<11175..11903)
location: region:11175-11903:-1
so has part: feature:11175-11903:-1:exon
subclass of: SO_0000010

position:11175:-1
position: 11175
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:11903:-1
position: 11903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11175-11903:-1:exon

AVI_RS22985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: rpsB
locus tag: AVI_RS22985
old locus tag: Avi_9516
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007693406.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 30S ribosomal protein S2
SIO_010081: AVI_RS22985
subclass of: SO_0000673
so part of: AVI_RS22985
location: complement(<11175..11903)
location: region:11175-11903:-1
so has part: feature:11175-11903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11175-11903:-1:exon

AVI_RS31215
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31215
old locus tag: Avi_9517
so part of: sequence
location: 12111..15983
location: region:12111-15983:1
so has part: feature:12111-15983:1:exon
subclass of: SO_0000010

position:12111:1
position: 12111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15983:1
position: 15983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12111-15983:1:exon

AVI_RS31215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31215
old locus tag: Avi_9517
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MVTTSEIQHTRLKGELVFQDFCLRLIRHYWQDDYAEAFGRSGQNQRGVDIVGRDNRNGYSHAGMQCKASETDGPRQLGIVELAAEVEKAKKYRPHLDILIVAYAGERDVALQQRAQEISADHARNGMFRVVVWSWPDMVSRAQNYPDVARELLVHNQVAATTPVLNPARPLSDPTSKFQAEIASAIEALRVSSAVVATKDETTALDAKLDVFRDQIRTGGGPLVVENLRALLGEISEDTPGRLKLRIFGNLGAALAQIGDFDGAEDAFAQAGASDPETAAGQSYRARAALLQGLPGQAFTAAQRAVELDPSNLSAANIFIESAPATMATADLELKIAAVAADIDVASSLQRRFVAIDKDFDASIRVARAIAVQDWRKDAVVAQAILSCFEDNKDVRVGAPVSTSEQFLLEESRTRLARAWGQIKTRPDRRNWTFVAANLCAALRLTGRDDEADAFSIEVHSLEPQDSALTQRCIFAHMHRNNVKAAYELATGLAGRSDSNAEVWFLAASVSATHRKWEETNSWAQKAFSASVDEGEPNPDAATLLILSVSRTETPAKAIELAKSLRPRFPTDIGFEAQVAEIARRAGDEPTRADALARLRAFSFDKLDATERFELADALADDADWSGAATLLDGLYQVDRPSEPLRRRLFYLYRADERSNARELFGSLGPAVLARPEILRLGAAIYERSGLLDDALKVLETAVKLDTADLRSRLDWVRIAIRAGHEGRVSAWIKKTHVSFDGNGEELIEFAQILNRYGRRRDALRVGFEALAVNWGTSERLHMGYLSLFLLQFRKDKFLHVKIVREDTVVYLENDHGEKVMYLIGSGSLPGIEALAADHAFAKSLIGKNVGATVLLGGIGQPVEWKVAEITHKFVALFRRALDAHGRLFPQSRALGRFTIDIDSKNAFEPIFEQARERARLVSDAVEIYSENLIPIDTVAKALGSDPIDTSRGLRFQSGVWLDSCVGDQSERQQALENLEGQSAVIVDALTLALWQEIEFIDLVEGLPITIHTVQATIDELAQRAEDAHQALNQEGGSLEAHGDGVVMVKSTLEQRQALREANNSILAWVRVHTKLLPTSVFYNDNEKIEDFLSSSTIDTIATARETGMTMISEDRRIRLLAAELGVGSSSWTQPFLLALRECKALRDEDYVRLVAKLYRQRIGFVSVGPAELLLAIEMDADVFSTLAETVTDARVDVTSLVPVASEVAYHLWTQTRFVADREIYFSKILNGVLQRPGGAGLFVRIAKMSYEALVDSGLVGVWRAKMWERYMHEFARGHFIHHLVAKPSK
SIO_010081: AVI_RS31215
subclass of: SO_0000673
so part of: AVI_RS31215
location: 12111..15983
location: region:12111-15983:1
so has part: feature:12111-15983:1:exon

WP_012655030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12111-15983:1:exon

AVI_RS31495
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31495
so part of: sequence
location: 16443..16901
location: region:16443-16901:1
so has part: feature:16443-16901:1:exon
subclass of: SO_0000010

position:16443:1
position: 16443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16901:1
position: 16901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16443-16901:1:exon

AVI_RS31495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31495
inference: COORDINATES: protein motif:HMM:NF025388.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4238 domain-containing protein
translation: MAKLDFAAFLATMFARSPAQLRQFAQSMGQMALWGNRHELDREFRQKEARGEVSAADKAIQKILHDNDMFTMNVDRRVGLLAFQQAETLMHLMARMKWSYEISDNQQLITSDNPVFWVKGGGASELGGYGFGLGNRFCSCAVSVESDRDTSP
SIO_010081: AVI_RS31495
subclass of: SO_0000673
so part of: AVI_RS31495
location: 16443..16901
location: region:16443-16901:1
so has part: feature:16443-16901:1:exon

WP_244427796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16443-16901:1:exon

AVI_RS23000
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23000
old locus tag: Avi_9521
so part of: sequence
location: 17350..18660
location: region:17350-18660:1
so has part: feature:17350-18660:1:exon
subclass of: SO_0000010

position:17350:1
position: 17350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18660:1
position: 18660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17350-18660:1:exon

AVI_RS23000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23000
old locus tag: Avi_9521
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004212819.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIYARRALQRRLDELRVKIGNEAVDAVVARLNEPGKDRVAAMWEVVVLHGLATTGGLESENALPSGRRPDVWFDGDVIRFVADVTSVSDDGLDVQNPHAELGELLNKAKNKLKLPIGGLDMRVHSRDELSSRGRRTFLKLPPRRKLSEFVKEEILPKLREQLAAGAKVLRVMIADEDVGIEIVIDPSKSPINSYGFAAYDVPTIKDKNPLYNALKAKADQLRGAEGISGIILGDGDCAALAERQASPRSVSCEAIARECLRQYSSLDFVLLLTIREGRRSFFPPTQPELRTHATLICRDESSVRGELETTFRAMLEKFPRPVNMPVNGALRAREARYEMGHHGGYKLSGQKIRVSSRELVEVLAGLRTFDNNGARNVELAGPLPHSTSHVSALFLRQVVNGHLPVKITVEKTDENDNDDWIEFDFGEPDPAITPYK
SIO_010081: AVI_RS23000
subclass of: SO_0000673
so part of: AVI_RS23000
location: 17350..18660
location: region:17350-18660:1
so has part: feature:17350-18660:1:exon

WP_012655033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17350-18660:1:exon

AVI_RS31500
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31500
old locus tag: Avi_9522
so part of: sequence
location: 18787..19353
location: region:18787-19353:1
so has part: feature:18787-19353:1:exon
subclass of: SO_0000010

position:18787:1
position: 18787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19353:1
position: 19353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18787-19353:1:exon

AVI_RS31500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31500
old locus tag: Avi_9522
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRYALAFLCCISYPGVVLAEPLPFAEPPSFKQATPGTFSTTVATQNCEPVFNVDSSGNRHYQLEAKWTDPENSTIYNPNFEAVRHEPERDHLRLRSYNGCTVGPKIETEQGKTLFIDLENKLLGPDPSCIDPHHNEANCFNTINLISMATTGRRVLSCAKSETIPNSSLPTMSSSRSFLEGGSNTNS
SIO_010081: AVI_RS31500
subclass of: SO_0000673
so part of: AVI_RS31500
location: 18787..19353
location: region:18787-19353:1
so has part: feature:18787-19353:1:exon

WP_012655034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18787-19353:1:exon

AVI_RS31510
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31510
pseudo: true
so part of: sequence
location: <19385..19559
location: region:19385-19559:1
so has part: feature:19385-19559:1:exon
subclass of: SO_0000010

position:19385:1
position: 19385
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:19559:1
position: 19559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19385-19559:1:exon

AVI_RS31510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001138082.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: AVI_RS31510
subclass of: SO_0000673
so part of: AVI_RS31510
location: <19385..19559
location: region:19385-19559:1
so has part: feature:19385-19559:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19385-19559:1:exon

AVI_RS23015
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23015
old locus tag: Avi_9524
so part of: sequence
location: 19826..20632
location: region:19826-20632:1
so has part: feature:19826-20632:1:exon
subclass of: SO_0000010

position:19826:1
position: 19826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20632:1
position: 20632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19826-20632:1:exon

AVI_RS23015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23015
old locus tag: Avi_9524
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKGYIVIGMIMPMLSSCVATPDLPDDGPANIAALSDAIQCEMGRAYQDEANAAEKFSNWFATYEITRIGEETLTASANPLEWIVPKNVDKLVFGGSLGRNGKTTRNAKVKFSMALAADSSTACKNAQSQASIKVNPREFKIREWLGQVSSGKSVPNTFSYSVTFEVTESAGFKPAFANGNFNGGSELSRVLKTTRTVDFAFATEPKDKVVNVFVTNAPDATIKLRRGQRRTPPKDGGATPQIPSSVLEQNNNSLLQLQLDRSTLDLDR
SIO_010081: AVI_RS23015
subclass of: SO_0000673
so part of: AVI_RS23015
location: 19826..20632
location: region:19826-20632:1
so has part: feature:19826-20632:1:exon

WP_012655035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19826-20632:1:exon

AVI_RS23020
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23020
old locus tag: Avi_9525
so part of: sequence
location: 20677..22509
location: region:20677-22509:1
so has part: feature:20677-22509:1:exon
subclass of: SO_0000010

position:20677:1
position: 20677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22509:1
position: 22509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20677-22509:1:exon

AVI_RS23020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23020
old locus tag: Avi_9525
inference: COORDINATES: protein motif:HMM:NF024685.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIR2 family protein
translation: MSNGDRFAIISVGGKGYDVLLKELSSAAPGLLFGSAASIFEPTLLQGGRPTSQAVARALCEAAGVDATAFASAIEGAAYEALLQEHPVRSRLSRVFSNYFLRFGAAQGQETVRFNKCHQAIAHLLSQGRLSGAVTTNYDTCLEQAYEDLRATNSLNTIVQRNDAAKKVALAEEPAPAPTLFKLHGCARHPKSMIFSLEQEKEMPAWKKQTMGSLLGKTVLVLGYSGLDFEVCPELYDLNIDNLYWMAWGKNGVPDLTSNAIKVLNKERRRSTVICGDLCVFLSDMTPLLSQDLPEVKNPVVPTLLSDKLLDALDQSGRRLWAARAFVMLSIPAAATSALRLERAGSEDQILSRDFELVRLGALNHSMRYYDNADANKELSDDASLPLRDRIGHAIGESGACSMAGDEKRSREALTRARDLTHNLTNPLHRKRLLIKTEWMDLLLQTAERDLKDSKLKENLIVRFRALQRRAYKTGEHILVDLCEQEVAQLSDVSVAAIHSGKERPSGDIFEQIGNYVGQVTALDTRTQQTGSTELASQLRKRLEKMPLYGLPTWRVYRTLIDFAATLDERENLYRLFEESIANCQFHPDYVLRVQESTRQKVITPLWSVT
SIO_010081: AVI_RS23020
subclass of: SO_0000673
so part of: AVI_RS23020
location: 20677..22509
location: region:20677-22509:1
so has part: feature:20677-22509:1:exon

WP_187152408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20677-22509:1:exon

AVI_RS23025
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23025
old locus tag: Avi_9526
so part of: sequence
location: complement(22615..24360)
location: region:22615-24360:-1
so has part: feature:22615-24360:-1:exon
subclass of: SO_0000010

position:22615:-1
position: 22615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24360:-1
position: 24360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22615-24360:-1:exon

AVI_RS23025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23025
old locus tag: Avi_9526
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017245160.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF262 domain-containing protein
translation: MYKPGGTIKSLLDKVANQDYVLPAIQREFVWWPDQIRELFDSLMQGYPFGTFLFWKIEQERRTEYKFYDFVRHYHQRDRFHCEFLQNPPNRELTAVLDGQQRMTALNVGLRGSYAWKMPGKRWSSDAAFPVRYLYLNLLSELDAESGCRYHFEFLTEPQSAKPESGEVWFKCGRIMEEEYDDLIDSLDDLNLDKEAVKTARATLRLFHKTIHDKDLITYYEEESQSLEHVLNIFIRMNNGGTPLSYSDLLLSVAVAQWEKVDAREAIHSLVDEMNKEGDGFKFTKDLALKAGLMLSDIGSVGFKVENFNKTNMAILETNWPRIHDAMLLAVQLLASFGFSSQNLRAESSILPIAYYLYARKLDGAYLHRAEFASDREGIRRWLIRSVLKASGIWGSGLDTLLTALREKIGANAASGFPVAELEAIMALRGKSLSFTDVEIDELCDLPYGDGRTFALLSLIFSGFDLSRHFHVDHIYPQGRFTTAQLRKAGVRQDLWDALQDKHNRLPNLQLLEGSINNQKRQKMPHEWFAWIKPDEGPRQQYLAGLEIASLPEDLNAFQEFYDQRRNALKARIIVALEQNE
SIO_010081: AVI_RS23025
subclass of: SO_0000673
so part of: AVI_RS23025
location: complement(22615..24360)
location: region:22615-24360:-1
so has part: feature:22615-24360:-1:exon

WP_012655037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22615-24360:-1:exon

AVI_RS23030
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23030
old locus tag: Avi_9527
so part of: sequence
location: complement(24544..25404)
location: region:24544-25404:-1
so has part: feature:24544-25404:-1:exon
subclass of: SO_0000010

position:24544:-1
position: 24544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25404:-1
position: 25404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24544-25404:-1:exon

AVI_RS23030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23030
old locus tag: Avi_9527
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGEAKRKKLLEQPSPESLNARRMEMVSLFHELNIDFRQPGFYDQPNFVAQEQKDKRFAENYAEWVLLRERNQDYDARAQAIVPQVAAILQRRIVQHNWHGACIAMTAILTRILDRLGIWNIPVRGSASVYAEGSSRHFAIIDQNEGTGFDTGHMWVIAPPYDIIDVTLHYQRWQGDAFQRHVPVIILGKGLASVKARAQDVIAPELRSQMPRDPDIHYKVFPDQRRVLEKFPAKRFISGSTDIRYVPGGVSLPDLPLEGINEEARAGVPGIQIWTDDILPTLGTTA
SIO_010081: AVI_RS23030
subclass of: SO_0000673
so part of: AVI_RS23030
location: complement(24544..25404)
location: region:24544-25404:-1
so has part: feature:24544-25404:-1:exon

WP_041699165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24544-25404:-1:exon

AVI_RS23035
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23035
old locus tag: Avi_9528
so part of: sequence
location: 25510..26523
location: region:25510-26523:1
so has part: feature:25510-26523:1:exon
subclass of: SO_0000010

position:25510:1
position: 25510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26523:1
position: 26523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25510-26523:1:exon

AVI_RS23035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23035
old locus tag: Avi_9528
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRLSGHSLESMGFSKLDKGDRLYGRFCRLLIYHIEGFRIDQPVIGPLSYIFEGHSCILAIGGSVNQACKVLVDDELVEDEDEWRKKNGTIGPYLVLKIGPSKEYATTATHSRKDGNGIWTNGGFEEARVELDGIQDSVAPRVVSSLTVAFSSAETAFRAVEAANFGLARSGERLRDMSFSMSAYAIVSKPIAADEVKATVLDALRHSFCLDRKVAGFYDLALKETDPTKQFLLFFIALELLTKTEFATRYPSVANSVSAATIPANDRKKLEHQFSWLQKNVLTSLPQQCVDSFQRLRKLRNLITHGGIASPEPQSLGEVKLLATTILSSVMTLPER
SIO_010081: AVI_RS23035
subclass of: SO_0000673
so part of: AVI_RS23035
location: 25510..26523
location: region:25510-26523:1
so has part: feature:25510-26523:1:exon

WP_012655039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25510-26523:1:exon

AVI_RS23040
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23040
old locus tag: Avi_9529
so part of: sequence
location: 26608..27747
location: region:26608-27747:1
so has part: feature:26608-27747:1:exon
subclass of: SO_0000010

position:26608:1
position: 26608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27747:1
position: 27747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26608-27747:1:exon

AVI_RS23040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23040
old locus tag: Avi_9529
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNIKSRATCLLCRLIWRLKRPKVRAVTPVIQNKPVSYADRLITLSGGPALIWPYHNILPGEGPFEIAPDSNCYRNPNWVEQLPSSIPRNKVIVNLLPALTEEWLANGKFRIDPERWIMDIVVHYEERGVCFRGSYAADLAKILRGNADALRYNWTLLFYYVAIIKKLLERRNVEEAMQELVKVSKADVPRAGMMLSLGALSLFLKADQTLHLHGDPKSAYSFVQRFFDFQPGQKGEVNHLSVAYLRNRSLDLGMYYFFPAMTSLGQQPVGETLIATHDAPLQRLIFRVLPFLFDPTVAPAVPTSIAVDEFANDDGLAFVEWRSRLNEKFEPPFNKDQRLKRLANLADYAKGLCDMSDEKDALDEVWREWTLPYLDGNP
SIO_010081: AVI_RS23040
subclass of: SO_0000673
so part of: AVI_RS23040
location: 26608..27747
location: region:26608-27747:1
so has part: feature:26608-27747:1:exon

WP_148213973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26608-27747:1:exon

AVI_RS23045
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23045
old locus tag: Avi_9530
so part of: sequence
location: complement(28041..29846)
location: region:28041-29846:-1
so has part: feature:28041-29846:-1:exon
subclass of: SO_0000010

position:28041:-1
position: 28041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29846:-1
position: 29846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28041-29846:-1:exon

AVI_RS23045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23045
old locus tag: Avi_9530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018517359.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIYIPAWHYRARAIVQRTWGWSPIEEMILLAFDLEPGTIADIAGRLRIPNQVARSTVARLMQFGLVELRVSPNPVLSTSPTGHEFIRTGRALPERTAEREMGISLVLEKVGHSVLRRKDVNIVPTQGLEHDGQTVAFPIGELPETDETMAHRVSHFVSQSLRPGEWLRGVRTTGSVMEKKYLEIDLAAFKRGEIPEGASANLVAAVNETLKTAVLPRASKGEPSVPASVETTFAPDQLVVGSPEHIERFERIVRAAVSDVFVLSTFVLSQSDDRGKVHRERIYSALEDAYRRGVRCHLFFGTSLDKSKHALAMEELHQRLSAVKQSRGFLLIHRDSVGSHAKFLAADDGQGGTVVVMGSCNWLSSPFSAVEVSIELREPMAVAAGLDILKGITVSLASASRSVETLQFLASEAKRARPALSIGSDKAPTTKARLTVLHAQDHGPLLRKAAHSANESFVCITNRMGATVVPGLLNPAEVAGRRLEDVRIYYSRQSGPTKRKHMAAHRKRLEGTVEVIPVREPQVHAKFLAWDRNDVVVSTMNWGSQSGSEADPLDEVGLHLEAPGIASHLLGLFDESLKKVLDEVSNTGGGEPAPEMGVGQ
SIO_010081: AVI_RS23045
subclass of: SO_0000673
so part of: AVI_RS23045
location: complement(28041..29846)
location: region:28041-29846:-1
so has part: feature:28041-29846:-1:exon

WP_012655041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28041-29846:-1:exon

AVI_RS23050
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23050
old locus tag: Avi_9531
so part of: sequence
location: complement(29843..33256)
location: region:29843-33256:-1
so has part: feature:29843-33256:-1:exon
subclass of: SO_0000010

position:29843:-1
position: 29843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33256:-1
position: 33256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29843-33256:-1:exon

AVI_RS23050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23050
old locus tag: Avi_9531
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006022639.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA domain-containing protein
translation: MSKSARAAKPTLDSRFRFAEASFHGAPGGWTSLLTPATGIEDGEQYLLRLFKKTGSAIDTDLKNLIGRGLRRIRRVLSSRQAQEVLVSVIEVVEDDDEIGILMLDPGSPLRGNAQGNRGRQGQYLVSSGRLVFWRNMVRVARGLAYCHDAGIVHGSVSVHTIFSHGDDREDYRLGGYETCVHIADSGLAGAGNPGQPPHAISFRQDWADLGRTASDLLGVDAAQSPALLSIERRILERLKNPPQFQLYDGRAVLRELGEVVEELEKVGSSADAELVLHPSRQALQSDLAALTSGAIPASDVEAVLAFVERDLHAPTTRLAVSDRGIVRIVTDLAIYMIEIDDPKIGSIRDAHRRRPGDWSVYDASDLTHRIHLARNRSGSDDRVRWLGPAAKNWTELCGQGVKAVATNDSPIWYALILLEAFSLLREQFRFYPIEVLTGVKNDRGVVWVVPVADPDLDDRRANAGFKPAAESMARELSNDDGRANWTFSRSDTLGSDRERAPQLNFEGTEVVGGKKAYAFTTGDALVPDYCYLRPRRDSGFERAVRRRLQNIVAARSNVELLRALDDPAQVLMDDALREIATPGPVPAGMDQSKAAAWDAIREGQPINIVVGPPGVGKTYLISNLVKSILSLAPDARILIAAQNHDTLVHMEEELEKELRGRSHIVVRIERTQTDEKDSVMRGRSRDLLRLASPQGSAALMSSQIRQIKHALNPVDAGEQAAGDRVHRDTENLLVRSSDITLATTSSYVIEEMIADGDQFDWTIVEEAARANGAEMIGALLLGNRRLLIGDHKQLSPFDHLERKKMYDGARAAELLRDARTKLGAINDLPSEVDEALQHIGDDRDLLHDVLAISARMEEPFASIALREGEREKITGRVSRFVNTLLEQSRMHPAICQVVSNTFYGGELIPSDRAVQRMPAVVSHGVLPNSPVVVMNLPPLSKVDRPAFETRVGRSLRNDVEATVLLDALKQLRPIVADDGRLPTLAVLSPYKAQVDHLKRSIGRQIKQPAGTLQGFASPRADGNFVFTSDSFQGSEADVVLASLVRNNQLVGSRALGFMRNPQRVNVLMSRARHKLIIVSSLDFVEDAVDGVDPDRLGGELGFLITMVGELRRLSLISDTEQSARIVDLDSNGAVKL
SIO_010081: AVI_RS23050
subclass of: SO_0000673
so part of: AVI_RS23050
location: complement(29843..33256)
location: region:29843-33256:-1
so has part: feature:29843-33256:-1:exon

WP_012655042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29843-33256:-1:exon

AVI_RS23055
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23055
old locus tag: Avi_9532
so part of: sequence
location: complement(33816..35573)
location: region:33816-35573:-1
so has part: feature:33816-35573:-1:exon
subclass of: SO_0000010

position:33816:-1
position: 33816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35573:-1
position: 35573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33816-35573:-1:exon

AVI_RS23055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23055
old locus tag: Avi_9532
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003529140.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding protein 2
translation: MSFLSRIITIRTKAHFSSVARRRSASFGPGKHKGNEARQRILVLMGGFCVLYTVIGARLVQYGTASPLVTSSISAPGFGIASRPDIVDRNGELLATDLNMVSLYAEPRKIVDIDEAVEKLSTVIKGIDWADTYKKLQSKSAFQWLRRRLTPRQQADILALGIPGIGFRPEKQRFYPGGATAAHILGHVNIDNKGLAGMERYIDQQGLADLRAAGLTDNAHLDPVRLSIDLRVQNIVHDVIAEAMINYKAEAAGAVVLDAETGEILAMASVPDYNPNEPSRTLPDGSVDKEYEKGWFNRMSNATYEMGSTFKSFTLAMGLDEGKIGLNSVLDASRPIKMGGFTIHDDHGQGRPLTVPEVFQYSSNIGTAKIATMVNLKDHQAFLTKLGLLSKMTTELPEVATPTQPRVWKPLNQVTISFGHGVATTPLQTAVAGAALINGGKLFSPTFLARSPDEADVVVKQVIQPKTSADMRYLFHWNGIKGSGRNAQVQGFNVGGKTGTADKVINGKYAAHLNFNAYLAGFPIDKPRYVVLTVIDAPLTGEKGGRLAAYTAAPMAKEVISRSAALLGVQPRFGNDDDPQLLTNY
SIO_010081: AVI_RS23055
subclass of: SO_0000673
so part of: AVI_RS23055
location: complement(33816..35573)
location: region:33816-35573:-1
so has part: feature:33816-35573:-1:exon

WP_012655043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33816-35573:-1:exon

AVI_RS23060
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23060
old locus tag: Avi_9533
so part of: sequence
location: complement(35784..36209)
location: region:35784-36209:-1
so has part: feature:35784-36209:-1:exon
subclass of: SO_0000010

position:35784:-1
position: 35784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36209:-1
position: 36209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35784-36209:-1:exon

AVI_RS23060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23060
old locus tag: Avi_9533
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007812123.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MKDEPHAVDVAVGRAIRKRRMINGVSQSDLGARIGVTFQQVQKYEKGTNRVSASMLMEIACALHVDVRSFFDGIDAPSGKEPLHHTATPAAFSITRETVALNQAFAQINDALLRRKIVDLVRAVASSSSTSEDELLHDLAE
SIO_010081: AVI_RS23060
subclass of: SO_0000673
so part of: AVI_RS23060
location: complement(35784..36209)
location: region:35784-36209:-1
so has part: feature:35784-36209:-1:exon

WP_012655044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35784-36209:-1:exon

AVI_RS23065
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23065
old locus tag: Avi_9535
so part of: sequence
location: complement(36246..36452)
location: region:36246-36452:-1
so has part: feature:36246-36452:-1:exon
subclass of: SO_0000010

position:36246:-1
position: 36246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36452:-1
position: 36452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36246-36452:-1:exon

AVI_RS23065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23065
old locus tag: Avi_9535
inference: COORDINATES: protein motif:HMM:NF024252.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSQERLSLEAHLERVAISQIERRRINPGLDSLGKIAQALGVPITDLFKEPMKGELEPANLRPGRRNST
SIO_010081: AVI_RS23065
subclass of: SO_0000673
so part of: AVI_RS23065
location: complement(36246..36452)
location: region:36246-36452:-1
so has part: feature:36246-36452:-1:exon

WP_244427802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36246-36452:-1:exon

AVI_RS23070
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23070
old locus tag: Avi_9537
so part of: sequence
location: 36960..37943
location: region:36960-37943:1
so has part: feature:36960-37943:1:exon
subclass of: SO_0000010

position:36960:1
position: 36960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37943:1
position: 37943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36960-37943:1:exon

AVI_RS23070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23070
old locus tag: Avi_9537
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018097546.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3991 and toprim domain-containing protein
translation: MKREKVEELKEKVNCGAVLEQAGFAVDIKESTRRAVKYRSGSDIIIVNHEGKGWFDPLSDAKGDVFSLVGHLDGVSFSECLERVGQLIGFDFGEPEWKPHPKTTPLVGPVSERWTLRRKPWRGSATWRYLSSERALPFSLLQAAVARDCLCEGPFGSMWAAHTDGAGHVTGWEERGPEWRGFATGGTKILFRIGPPDALRICVTEAAIDAMSLAAIEGLRDGTIYVSTGGGWSPTTEAAIRALVSRPDVQLVAATDANSQGETFAERLRALAEEAGCGWMRLRPSEEDWNEVLKTRRKERERDEKGKGLPHSRRPRQGKLRPGLAGP
SIO_010081: AVI_RS23070
subclass of: SO_0000673
so part of: AVI_RS23070
location: 36960..37943
location: region:36960-37943:1
so has part: feature:36960-37943:1:exon

WP_012655047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36960-37943:1:exon

AVI_RS23075
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23075
old locus tag: Avi_9538
so part of: sequence
location: 38060..38665
location: region:38060-38665:1
so has part: feature:38060-38665:1:exon
subclass of: SO_0000010

position:38060:1
position: 38060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38665:1
position: 38665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38060-38665:1:exon

AVI_RS23075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23075
old locus tag: Avi_9538
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003508774.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1419 domain-containing protein
translation: MLTSSEPRKIFQGVATRSQMFSLFDRHRQMSSRFDGDVSALYAGEWFAIGEAEHDYMFDILPPLWIRGDTFAMREFMTGSVTSVFFTLQIDGAIRHFHSYCDLADTQSVGRMRQAINQCETRPLQTMTRDEQLEHIWSMTSDAYRGYSNDDHPQHLPGRRMIIVFSDGGTGRQKLLADLTDTEIAAKLPVHLRYLPDAIAA
SIO_010081: AVI_RS23075
subclass of: SO_0000673
so part of: AVI_RS23075
location: 38060..38665
location: region:38060-38665:1
so has part: feature:38060-38665:1:exon

WP_041699169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38060-38665:1:exon

AVI_RS23080
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23080
old locus tag: Avi_9539
pseudo: true
so part of: sequence
location: 38678..>38956
location: region:38678-38956:1
so has part: feature:38678-38956:1:exon
subclass of: SO_0000010

position:38678:1
position: 38678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38956:1
position: 38956
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38678-38956:1:exon

AVI_RS23080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23080
old locus tag: Avi_9539
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501412.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF3085 domain-containing protein
SIO_010081: AVI_RS23080
subclass of: SO_0000673
so part of: AVI_RS23080
location: 38678..>38956
location: region:38678-38956:1
so has part: feature:38678-38956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38678-38956:1:exon

AVI_RS23085
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23085
old locus tag: Avi_9541
so part of: sequence
location: 39073..44178
location: region:39073-44178:1
so has part: feature:39073-44178:1:exon
subclass of: SO_0000010

position:39073:1
position: 39073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44178:1
position: 44178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39073-44178:1:exon

AVI_RS23085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23085
old locus tag: Avi_9541
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003508776.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MSNDPFTLDMFGNTALSSGLGLGVTAFGSFSTPANDDDPEPTPPAPAAAMSVDSMKQPPRKPGHRANFYLGEDDRGLAASWKERARMNVAAILTANEIENHNIPVTRAHQQKLIRFAGFGASELANGMFRRPGEVGFRKGWDDLGSSLETGVSGLDYASLARCTQYAHFTPEFIIRAIWSGLQRLGWLGGRVLEPGIGTGLFPALMPEAFRYKSYVTGVELDPVTARIVRLLQPKARIVNGDFSRTDLGVIYDLAIGNPPFSDRAVRSDRAYRSLGLRLHDYFIARSIDLLKPGALAAFVTSSGTMDKADSTARGHIAKSADLIAAIRLPEGSFRRDAGTDVVVDLLFFRKRKMGEVEGDLSWLDLQEVRPATADDGAIRVNRWFARHPDFVLGDHALTSGAFGETYTCLPRAGEDLEAALNAAVSLLPEDIYDGEPTPVDIDLEAELGDIVDIRPRNDTVREGSFFIDNARGLMQMVDGAAVVIPVRKGRAGEGIPEKHVRIIRKLIPIRDAVRDVLKAQEQDRPWRDLQVRLRIAWSNFVRDFGPINHTTVSISEDAETDEVRETHRQPNLLPFRDDPDCWLVASIEDYDLETDTAKPGPIFTERVIAPPAPPVITSSTDALAVVLNERGHVDLDHIAELLHSDPAAVIADLGDGIFQNPTDGSWQISDAYLSGSVRTKLAFAEAAAELDPTFGRNVRALQAVQPADLRPSDIAARLGAPWIPASDIVAFVRQTMEADIRIHHMPELGSWTVEARQLGYSAAGTSEWGTDRRYAGDLLADALNSRVPQIFDTVKDIDGERRILNVVDTEAARDKLQKIKQAFQNWVWTDPDRTDRLARVYNDRFNNIAPRAFDGSHLKLPGASSAFVLYGHQKRGIWRIISSGSTYLAHAVGAGKTMTMAAAIMEQRRLGLIAKAMLVVPGHCLAQAAREFLALYPNANILVADETNFTKDKRARFLSRAATATWDAIIITHSAFRFIAVPSAFEQQMIHDELELFEDLMTRVESDDRVSRKRLERLKEGLQERLEALATRKDDLLTISEIGVDQIIVDEAQEFRKLSFATNMATLKGIDPNGSQRAWDLFVKSRFIETKNPGRALVLASGTPITNTLGEMFSIQRLLGHEALRERGLHEFDAWASTFGDTATALEIQPSGKYKPVSRFASFVNVPELIAMFRSFADVVMPDDLRQYVKVPAISTGRRQIVTAKPTQAFRNYQTILDARIKAIEQREGPPKPGDDILLSVITDGRHAAIDLRLVDTDNDNEPDNKLNLLVENAFRLWQDTSQNTYLKPDGKPYELPGAAQMIFSDLGTINVEKSRGFSAYRWIRDELIRMGVPPAEIAYMQDYKKTEAKQRLFGDVRAGKVRFLIGSSETMGTGVNAQLRLKALHHLDVPWLPSQIEQREGRIVRQGNQHDEVDIFAYATQGSLDASMWQNNERKARFIAAALSGDTSIRRLEDMGEGQANQFAMAKAIASGDERLMQKAGLEADIARLDRLRAAHEDDQYAVRRQIRDAERDIEVSTRRISGIGEDIKRLVPTAGDGFAMIVAGKPYDERKLAGRALMKEILTLLQLRQQGEVTLGTIGGFDLVYDGERFGKGEGYRFQTLLQRTGADYDIDLDVTVTPLGAISRLEHALGDFDGEQQRYRQRLEEAYRRLASYRSREGGQFAFAEELADKREALRKIEEALATSALAENTRATSRLS
SIO_010081: AVI_RS23085
subclass of: SO_0000673
so part of: AVI_RS23085
location: 39073..44178
location: region:39073-44178:1
so has part: feature:39073-44178:1:exon

WP_012655050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39073-44178:1:exon

AVI_RS23090
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23090
old locus tag: Avi_9542
so part of: sequence
location: complement(44261..44695)
location: region:44261-44695:-1
so has part: feature:44261-44695:-1:exon
subclass of: SO_0000010

position:44261:-1
position: 44261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44695:-1
position: 44695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44261-44695:-1:exon

AVI_RS23090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23090
old locus tag: Avi_9542
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMAVASDTTIDQSSGSRMQVFTEYNGKRFVTNMDFLLADEDDYATYLLNATRLNQELGKDPFFWASDRTAVLAQTDFKPGKYHCWVTRLEARQEIAIPILTQTSEGEVTVLSGRHRIMAMMDNGFEQIPVRAKVALREKLAPLA
SIO_010081: AVI_RS23090
subclass of: SO_0000673
so part of: AVI_RS23090
location: complement(44261..44695)
location: region:44261-44695:-1
so has part: feature:44261-44695:-1:exon

WP_049777416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44261-44695:-1:exon

AVI_RS23095
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23095
so part of: sequence
location: 44880..45185
location: region:44880-45185:1
so has part: feature:44880-45185:1:exon
subclass of: SO_0000010

position:44880:1
position: 44880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45185:1
position: 45185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44880-45185:1:exon

AVI_RS23095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007199847.1
GO component: GO:0005694 - chromosome [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integration host factor subunit beta
translation: MIRSELIDVIAARNPHLYRQDAERIVNTILDDIAAALERGERVELRGFGIFVVRHRPARSGRNPMTGKAVFVEEKWVPFFRAGKELRDRLNDDGSLVEHED
SIO_010081: AVI_RS23095
subclass of: SO_0000673
so part of: AVI_RS23095
location: 44880..45185
location: region:44880-45185:1
so has part: feature:44880-45185:1:exon

WP_041699171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44880-45185:1:exon

AVI_RS23100
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23100
old locus tag: Avi_9545
so part of: sequence
location: 45192..45626
location: region:45192-45626:1
so has part: feature:45192-45626:1:exon
subclass of: SO_0000010

position:45192:1
position: 45192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45626:1
position: 45626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45192-45626:1:exon

AVI_RS23100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23100
old locus tag: Avi_9545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501408.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVEYGGGTPFCNALPERLRSIVDMMTPQLLAETWPLRFVALLSMLEDMAGEAGEVDRPLVVNKWVAIVSGLLENLPRDMDSSECLALMRHSAIETFRKRATLQSPDVSQQDELLRSTYPQWSVVEDLLDEYEAWAAHQLRTTRH
SIO_010081: AVI_RS23100
subclass of: SO_0000673
so part of: AVI_RS23100
location: 45192..45626
location: region:45192-45626:1
so has part: feature:45192-45626:1:exon

WP_012655052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45192-45626:1:exon

AVI_RS23105
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23105
old locus tag: Avi_9546
so part of: sequence
location: 45642..45941
location: region:45642-45941:1
so has part: feature:45642-45941:1:exon
subclass of: SO_0000010

position:45642:1
position: 45642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45941:1
position: 45941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45642-45941:1:exon

AVI_RS23105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23105
old locus tag: Avi_9546
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003526135.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold shock domain-containing protein
translation: MPTGKLKWFDTTKGYGFITSDDGGPDVFLHLSKVTEANLPTLQPGVRLRYVLGRQGNKVSAHDLSLMPDEAATRSPARMIDGDADFEAEFEREWGLRRG
SIO_010081: AVI_RS23105
subclass of: SO_0000673
so part of: AVI_RS23105
location: 45642..45941
location: region:45642-45941:1
so has part: feature:45642-45941:1:exon

WP_012655053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45642-45941:1:exon

AVI_RS23110
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23110
old locus tag: Avi_9549
so part of: sequence
location: complement(46023..46520)
location: region:46023-46520:-1
so has part: feature:46023-46520:-1:exon
subclass of: SO_0000010

position:46023:-1
position: 46023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46520:-1
position: 46520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46023-46520:-1:exon

AVI_RS23110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23110
old locus tag: Avi_9549
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013913785.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RES domain-containing protein
translation: MEYLGPLYRALNPVYAREPLSGRGAELYGGRFNPKGVPALYTSLSIITALREANQAGSFQPTTLVSYDAEINHVFDTRDETTLARKGMDRAALSDDSWRDQMKATGEARTQAFARLLIAEGYSGLLVRSFAQGVGEKDLNLVLWKWGEKTPSRLTLVDDENRLSR
SIO_010081: AVI_RS23110
subclass of: SO_0000673
so part of: AVI_RS23110
location: complement(46023..46520)
location: region:46023-46520:-1
so has part: feature:46023-46520:-1:exon

WP_012655054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46023-46520:-1:exon

AVI_RS23115
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23115
old locus tag: Avi_9550
so part of: sequence
location: complement(46526..46876)
location: region:46526-46876:-1
so has part: feature:46526-46876:-1:exon
subclass of: SO_0000010

position:46526:-1
position: 46526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46876:-1
position: 46876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46526-46876:-1:exon

AVI_RS23115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23115
old locus tag: Avi_9550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012655055.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2384 domain-containing protein
translation: MGLAQYADGGFFAPRKIAEAFLTTSEEVARTAGLGKDSVQRKERVRSDRTQRRLREMIEVINKVEPRFGSALIAYAWFRSEPLPGFSGQTAMQLVRTGRVEDVLDFIDAVDAGVHA
SIO_010081: AVI_RS23115
subclass of: SO_0000673
so part of: AVI_RS23115
location: complement(46526..46876)
location: region:46526-46876:-1
so has part: feature:46526-46876:-1:exon

WP_012655055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46526-46876:-1:exon

AVI_RS23120
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23120
old locus tag: Avi_9553
so part of: sequence
location: 47213..49003
location: region:47213-49003:1
so has part: feature:47213-49003:1:exon
subclass of: SO_0000010

position:47213:1
position: 47213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49003:1
position: 49003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47213-49003:1:exon

AVI_RS23120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23120
old locus tag: Avi_9553
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015341931.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MHIVRLDPRALKDNPDRTRRSQSSPQSDALMLATIKAVGIIQPPVVAQERDGGNAYVIDAGHRRVKQAIAAGLEEIEVLVADASDDNGAMRGMIENIAREPLNPVDQWRGIERLVALGWTEEAIAVALALPVRQIRKLRLLANVLPAMLEQMAKGDMPSEQQLRTIAAASLEDQKEVWKAQKPKKGDTASWWAIANGLSKTRMYARDASFGEDLAQAYGIAWVEDLFAPADEDSRYTTDVEAFLGAQQEWMTSNLPKKGAIVEVNSWGQPQLPAKADRVYGKPGKGDYTAMYIDRDGKVQSVHYRMPESKKTKAKGDTGSPDGDLDDDAIAVTAKPRPDVTQKGQDMIGDFRTDALHEALGRAPIEDDMLMALLVIAFAGLNVRVDTGAGGDVYGTKRFNGHVGPLLDENGKIDLDTDRLRVAARSVLIDVLSCRRNSSNSGIVARIAGDAIGADAFLPNMGTEDFLSCLSRHALETSAGQAAVVPRPKVKETRAALVDHFKEERFVHPTALFAPAMEDLTALFKAGAAPDEDADTSFGTAEDDIVEHTARDAGRDEDDVVDQADSTSSEAAANEPATDPLVDEPSVDDHYGIAAE
SIO_010081: AVI_RS23120
subclass of: SO_0000673
so part of: AVI_RS23120
location: 47213..49003
location: region:47213-49003:1
so has part: feature:47213-49003:1:exon

WP_012655057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47213-49003:1:exon

AVI_RS23125
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23125
old locus tag: Avi_9554
so part of: sequence
location: 49097..49573
location: region:49097-49573:1
so has part: feature:49097-49573:1:exon
subclass of: SO_0000010

position:49097:1
position: 49097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49573:1
position: 49573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49097-49573:1:exon

AVI_RS23125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23125
old locus tag: Avi_9554
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011427428.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAHAIFDLAPLGSIVSWSDATPQPPERHKKKLSAWKTRNSQGRLIRKHGERTTGSYVARPDFTIHEGDFGGNGTIIVRIHRTFSVDSELIFNVLERPRTGSVRIFDRAGEYAELVHLAEDREAAEAWLKRHGYPNAVLDEVTANEVAADVIEGRAAA
SIO_010081: AVI_RS23125
subclass of: SO_0000673
so part of: AVI_RS23125
location: 49097..49573
location: region:49097-49573:1
so has part: feature:49097-49573:1:exon

WP_012655058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49097-49573:1:exon

AVI_RS30660
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS30660
old locus tag: Avi_9555
so part of: sequence
location: 49696..50034
location: region:49696-50034:1
so has part: feature:49696-50034:1:exon
subclass of: SO_0000010

position:49696:1
position: 49696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50034:1
position: 50034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49696-50034:1:exon

AVI_RS30660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS30660
old locus tag: Avi_9555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018240815.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEAARRQTQHQLDMIDRQITRKMTAIIPLLGKRRSRVQRGRAPDPGAFLDRYRRNLAALTSERQPEIDALARKLARQDAAITVMQARLVENIDVRRDPPAGCSAIYQSELPR
SIO_010081: AVI_RS30660
subclass of: SO_0000673
so part of: AVI_RS30660
location: 49696..50034
location: region:49696-50034:1
so has part: feature:49696-50034:1:exon

WP_244427803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49696-50034:1:exon

AVI_RS31515
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31515
old locus tag: Avi_9556
so part of: sequence
location: 50031..50450
location: region:50031-50450:1
so has part: feature:50031-50450:1:exon
subclass of: SO_0000010

position:50031:1
position: 50031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50450:1
position: 50450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50031-50450:1:exon

AVI_RS31515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31515
old locus tag: Avi_9556
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011654731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTIGDLERRAGIGPSREERAAFWLRFRHLDGIACLKAGVAELERLIAMKKAAEPTAELTERKSSRRNRLPPLTDEQERALQAYAAKHGRRWKSVLSNAWMGEAPYDDGPLLRYLRNTRGPSWLVTYRLPKAPPSTAPR
SIO_010081: AVI_RS31515
subclass of: SO_0000673
so part of: AVI_RS31515
location: 50031..50450
location: region:50031-50450:1
so has part: feature:50031-50450:1:exon

WP_012655060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50031-50450:1:exon

AVI_RS23140
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23140
old locus tag: Avi_9558
so part of: sequence
location: 51064..51651
location: region:51064-51651:1
so has part: feature:51064-51651:1:exon
subclass of: SO_0000010

position:51064:1
position: 51064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51651:1
position: 51651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51064-51651:1:exon

AVI_RS23140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23140
old locus tag: Avi_9558
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012654887.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKASTQSRQPARVVQLRKGATLEMVRLTCPDAAQALSIAESFGTAVVDGDGIRDLHERLIIETADSLSEGLGERAMQIHLQRIVGAYVGSAQGAGQFYSRAVTEARDATAKAASDNRDEDLDGPVGYDSAAQRKREFAADMGIQAHSLRMAAEGTVRAYEQVVGETWKPFDRPVENPGQSVDRKAAAAQMAALG
SIO_010081: AVI_RS23140
subclass of: SO_0000673
so part of: AVI_RS23140
location: 51064..51651
location: region:51064-51651:1
so has part: feature:51064-51651:1:exon

WP_012655062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51064-51651:1:exon

AVI_RS23145
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23145
old locus tag: Avi_9559
so part of: sequence
location: 51766..52245
location: region:51766-52245:1
so has part: feature:51766-52245:1:exon
subclass of: SO_0000010

position:51766:1
position: 51766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52245:1
position: 52245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51766-52245:1:exon

AVI_RS23145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23145
old locus tag: Avi_9559
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011982960.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ProQ/FINO family protein
translation: MTENSTTETSKPWRLSKGPITANAYDLKKAEAINALLGSPAGILPTSESDPILPFAIGLFETFKSRLRDDATPTQLRRATAIYTHAKNYLLACAQPDSMRHDIDGRPVAPVSEEDRLSSQLRFADILRSRKLLQTDASAQGDDAASRQPEPAAADAPQN
SIO_010081: AVI_RS23145
subclass of: SO_0000673
so part of: AVI_RS23145
location: 51766..52245
location: region:51766-52245:1
so has part: feature:51766-52245:1:exon

WP_012655063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51766-52245:1:exon

AVI_RS23150
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23150
old locus tag: Avi_9561
so part of: sequence
location: 52263..53153
location: region:52263-53153:1
so has part: feature:52263-53153:1:exon
subclass of: SO_0000010

position:52263:1
position: 52263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53153:1
position: 53153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52263-53153:1:exon

AVI_RS23150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23150
old locus tag: Avi_9561
inference: COORDINATES: protein motif:HMM:NF015354.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobA/MobL family protein
translation: MAIYHLRVDKIGRSKGQSAVASASYYADEPLIDHRTGIRHVMPPRPGLIHEDILTPAGMPYPHSADRQSLWNAVESHEKRNDSNTALVWHAALPRELTDRQAIILAEAFARSLMEREGNVIDLTVRQTGPGSLVAFLLCTTRHVTATGFGDKIDFVLGGRDREKRGLPKSPRTDLAEIRVQWADLVNAALENAGSTARVDHRSLKDRGYDLIPQTHLGSAARRRTERGEDIDRKAGSIERDVHNTRIIQERPSIIRQLIADAGQTFDGETIEIFVRCYVDDQILQRELCRLVFGEK
SIO_010081: AVI_RS23150
subclass of: SO_0000673
so part of: AVI_RS23150
location: 52263..53153
location: region:52263-53153:1
so has part: feature:52263-53153:1:exon

WP_041699174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52263-53153:1:exon

AVI_RS31225
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31225
so part of: sequence
location: 53153..53311
location: region:53153-53311:1
so has part: feature:53153-53311:1:exon
subclass of: SO_0000010

position:53311:1
position: 53311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53153-53311:1:exon

AVI_RS31225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31225
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTARRPMRSVPVDRSDAGQSSRNSFAVLLFVAALATGYAGGLRVRTSFCPSL
SIO_010081: AVI_RS31225
subclass of: SO_0000673
so part of: AVI_RS31225
location: 53153..53311
location: region:53153-53311:1
so has part: feature:53153-53311:1:exon

WP_187152409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53153-53311:1:exon

AVI_RS23155
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23155
old locus tag: Avi_9564
so part of: sequence
location: 53364..54290
location: region:53364-54290:1
so has part: feature:53364-54290:1:exon
subclass of: SO_0000010

position:53364:1
position: 53364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54290:1
position: 54290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53364-54290:1:exon

AVI_RS23155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23155
old locus tag: Avi_9564
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018516741.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ArdC family protein
translation: MTRKSENERADLYTRITDKIVAELQQGVRPWMRPWSAANTTGRISRPLRHNGEPYSGLNVLLLWSEGTARGYSSPMWMTFKQSLDLGAAVRKGETGTTIIYASRFTKTEADGRGGEVERDIPFLKAYTVFNVAQIDGLPDHYHVAAEPALNPVESIAHADQFFRNTGAIIRHGGNQAFYSPGSDIIQMPPFESFKDPAAYVGTLSHESCHWTAHPDRVGRDLSRYAKDKTERAREELIAELGSCFLCADLGIVPELEPRPDHAAYLQSWLSVLSDDRKAIFQAAAHAQRAVNYLHGLQPLASEEREAA
SIO_010081: AVI_RS23155
subclass of: SO_0000673
so part of: AVI_RS23155
location: 53364..54290
location: region:53364-54290:1
so has part: feature:53364-54290:1:exon

WP_012655064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53364-54290:1:exon

AVI_RS23160
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23160
old locus tag: Avi_9566
so part of: sequence
location: 54290..54841
location: region:54290-54841:1
so has part: feature:54290-54841:1:exon
subclass of: SO_0000010

position:54841:1
position: 54841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54290-54841:1:exon

AVI_RS23160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23160
old locus tag: Avi_9566
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006472572.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPLHSSSRLIILACSATKRAEPDYMPALERYDGPLWKTLRAADPEGMKASVAFLSARLGFRAADTPIEMYDARMTPEIAAAIKAGGLATRWPRPKTQRRVMPSGEHAGEHIASMTQYGRAPFCEVALVGGHLYLDVMRHFVGLFRDGGFVSADATIIEINGPIGMMRRDLRLWLAGEGGGTD
SIO_010081: AVI_RS23160
subclass of: SO_0000673
so part of: AVI_RS23160
location: 54290..54841
location: region:54290-54841:1
so has part: feature:54290-54841:1:exon

WP_012655065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54290-54841:1:exon

AVI_RS23165
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23165
old locus tag: Avi_9567
so part of: sequence
location: 54841..55782
location: region:54841-55782:1
so has part: feature:54841-55782:1:exon
subclass of: SO_0000010

position:55782:1
position: 55782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54841-55782:1:exon

AVI_RS23165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23165
old locus tag: Avi_9567
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011578771.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFHTPVNGGEGAQLSSIRLRVLSLGAGVQSTTLALMAAHGEIGPMPDCAIFADTGWEPKAVYEHLEWLMSPNVLPFPVHIVSAGNIREQLIQAGRGNRWASIPAFTKSVIRSGTELPILDEDDEGELIEIGRRQTKVETVSIGMLRRQCTGDFKIVPIRRKVRELAGLTRKRSPKCAVVESLIGISLDEIVRAKPSFEAWQVKRYPLIEQRLKRCDCLAWLRRHGYPEPPKSACIGCPFHDNRRWRAMRDHDPEAWADAVDVDRAIRTGLRGIRGEVYLHRSCVPLEDADLSTAADHGQLDLWPNECEGMCGL
SIO_010081: AVI_RS23165
subclass of: SO_0000673
so part of: AVI_RS23165
location: 54841..55782
location: region:54841-55782:1
so has part: feature:54841-55782:1:exon

WP_041699176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54841-55782:1:exon

AVI_RS23170
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23170
so part of: sequence
location: 56075..56260
location: region:56075-56260:1
so has part: feature:56075-56260:1:exon
subclass of: SO_0000010

position:56075:1
position: 56075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56260:1
position: 56260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56075-56260:1:exon

AVI_RS23170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015341926.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHNLSLAQSHAFDLARTLMVPVLLFRSGNEFGVLPADEIDGEDDLEIVHEYDPFDARPAH
SIO_010081: AVI_RS23170
subclass of: SO_0000673
so part of: AVI_RS23170
location: 56075..56260
location: region:56075-56260:1
so has part: feature:56075-56260:1:exon

WP_041699178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56075-56260:1:exon

AVI_RS29290
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS29290
old locus tag: Avi_9570
so part of: sequence
location: complement(56381..56851)
location: region:56381-56851:-1
so has part: feature:56381-56851:-1:exon
subclass of: SO_0000010

position:56381:-1
position: 56381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56851:-1
position: 56851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56381-56851:-1:exon

AVI_RS29290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS29290
old locus tag: Avi_9570
inference: COORDINATES: protein motif:HMM:NF024098.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3800 domain-containing protein
translation: MERPAPLASTRTRCWLHDGFLNTLFRKKNPERGFVILDKSNYEEKIQTLSHVFKHIGHANGQLRNFAEVPLFLDSKASRLIQMADLIAYWIFRHYQSGDSRGFNLIKPHFARYGVPGAFSSGLWQLVSAETETRLAAIGAHQHPFPAPTPKPAAPE
SIO_010081: AVI_RS29290
subclass of: SO_0000673
so part of: AVI_RS29290
location: complement(56381..56851)
location: region:56381-56851:-1
so has part: feature:56381-56851:-1:exon

WP_049777417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56381-56851:-1:exon

AVI_RS23180
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23180
old locus tag: Avi_9572
so part of: sequence
location: 57384..57695
location: region:57384-57695:1
so has part: feature:57384-57695:1:exon
subclass of: SO_0000010

position:57384:1
position: 57384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57695:1
position: 57695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57384-57695:1:exon

AVI_RS23180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23180
old locus tag: Avi_9572
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011654735.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF736 domain-containing protein
translation: MATIGTFTTTENGFTGSIRTLALNVKARIARVENPSEKGPHFRIYAGNVELGAAWQKRSEQTDRDYLSVKLDDPSFPAPIYATLAEVEGEDGYQLIWSRPNRD
SIO_010081: AVI_RS23180
subclass of: SO_0000673
so part of: AVI_RS23180
location: 57384..57695
location: region:57384-57695:1
so has part: feature:57384-57695:1:exon

WP_041699180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57384-57695:1:exon

AVI_RS23185
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23185
so part of: sequence
location: 57866..58111
location: region:57866-58111:1
so has part: feature:57866-58111:1:exon
subclass of: SO_0000010

position:57866:1
position: 57866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58111:1
position: 58111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57866-58111:1:exon

AVI_RS23185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006470229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAHAIRHSDATPEQVIRTLARQHGIVAERNGTDDMADTITRLSGDDVIHDEIEDLLVTMQRKGVITDVQANALYGNYLASA
SIO_010081: AVI_RS23185
subclass of: SO_0000673
so part of: AVI_RS23185
location: 57866..58111
location: region:57866-58111:1
so has part: feature:57866-58111:1:exon

WP_049777418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57866-58111:1:exon

AVI_RS31520
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31520
so part of: sequence
location: 58108..58266
location: region:58108-58266:1
so has part: feature:58108-58266:1:exon
subclass of: SO_0000010

position:58108:1
position: 58108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58266:1
position: 58266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58108-58266:1:exon

AVI_RS31520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31520
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTFDRFGDYSTRGYLRNTLGADENVVKRLEHRAFRANLDSALDSLKSKSTLA
SIO_010081: AVI_RS31520
subclass of: SO_0000673
so part of: AVI_RS31520
location: 58108..58266
location: region:58108-58266:1
so has part: feature:58108-58266:1:exon

WP_244427798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58108-58266:1:exon

AVI_RS31525
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31525
old locus tag: Avi_9577
so part of: sequence
location: 58274..59485
location: region:58274-59485:1
so has part: feature:58274-59485:1:exon
subclass of: SO_0000010

position:58274:1
position: 58274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59485:1
position: 59485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58274-59485:1:exon

AVI_RS31525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31525
old locus tag: Avi_9577
inference: COORDINATES: protein motif:HMM:NF037136.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BID domain-containing protein
translation: MQVHAKLFSSIYPWAGQDRIVTAPGSAIGKNGNFDLFSHPADSRRAVETALEMAADKNTMRARPGEVMGYLAYAHPFLDGNGRTIMTLRAELCRRAGIHIDWSQTNKFDYLNALTKELDTPGKGHLDAYLKPFLRIEALDQAQSANMLRDLPGLRPSAVPQQGPVIVPKRDLDPTATKADIERALAANDAFVDSDRKLEQMAASVYKDPVPLIKDIREAALTGSIGDQSVVKRIDLDPDSYGPYKGAGGIFSSQQERKDYRNATAARSGLKAGAEHLISTAHGIRQALANEKQQLAERDKIEIRLPDPVMMNAIEKSQPLSDAQAAEIDKAIRSFEHRFGDDVGKVRTALNLAPLAEKHGLDTEQLTMARQVLKTLDKGQSQAREQAQVIKQSQGQARGGPTR
SIO_010081: AVI_RS31525
subclass of: SO_0000673
so part of: AVI_RS31525
location: 58274..59485
location: region:58274-59485:1
so has part: feature:58274-59485:1:exon

WP_244427799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58274-59485:1:exon

AVI_RS29825
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS29825
old locus tag: Avi_9580
pseudo: true
so part of: sequence
location: 59890..60199
location: region:59890-60199:1
so has part: feature:59890-60199:1:exon
subclass of: SO_0000010

position:59890:1
position: 59890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60199:1
position: 60199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59890-60199:1:exon

AVI_RS29825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS29825
old locus tag: Avi_9580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477327.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF736 domain-containing protein
SIO_010081: AVI_RS29825
subclass of: SO_0000673
so part of: AVI_RS29825
location: 59890..60199
location: region:59890-60199:1
so has part: feature:59890-60199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59890-60199:1:exon

AVI_RS30670
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS30670
so part of: sequence
location: 60360..60677
location: region:60360-60677:1
so has part: feature:60360-60677:1:exon
subclass of: SO_0000010

position:60360:1
position: 60360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60677:1
position: 60677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60360-60677:1:exon

AVI_RS30670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS30670
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018482046.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDIEITPAETDDIAAVATPAQRNPIRDGFDAEIHLPSTISKEFLSAALLWAIENKAEFGVFHDPQQIVFAFLGGHSHYMPSRWSDKRWHIGRENLDPGFSPEDA
SIO_010081: AVI_RS30670
subclass of: SO_0000673
so part of: AVI_RS30670
location: 60360..60677
location: region:60360-60677:1
so has part: feature:60360-60677:1:exon

WP_041699184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60360-60677:1:exon

AVI_RS31240
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31240
so part of: sequence
location: 61241..61414
location: region:61241-61414:1
so has part: feature:61241-61414:1:exon
subclass of: SO_0000010

position:61241:1
position: 61241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61414:1
position: 61414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61241-61414:1:exon

AVI_RS31240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31240
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMTMILEIQIEELRLELNSAFDIIERRQIEIELELARAELAVTLAEQDGVIDAEPPF
SIO_010081: AVI_RS31240
subclass of: SO_0000673
so part of: AVI_RS31240
location: 61241..61414
location: region:61241-61414:1
so has part: feature:61241-61414:1:exon

WP_187152412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61241-61414:1:exon

AVI_RS31245
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31245
so part of: sequence
location: 61702..61875
location: region:61702-61875:1
so has part: feature:61702-61875:1:exon
subclass of: SO_0000010

position:61702:1
position: 61702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61875:1
position: 61875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61702-61875:1:exon

AVI_RS31245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020048120.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQQLAQFLNRTGRRLRTLGKVIVHFFRKGKLGLKLAIKIPFFVKIEATFETDWYRRH
SIO_010081: AVI_RS31245
subclass of: SO_0000673
so part of: AVI_RS31245
location: 61702..61875
location: region:61702-61875:1
so has part: feature:61702-61875:1:exon

WP_187152410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61702-61875:1:exon

AVI_RS23205
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23205
old locus tag: Avi_9587
so part of: sequence
location: complement(61930..62196)
location: region:61930-62196:-1
so has part: feature:61930-62196:-1:exon
subclass of: SO_0000010

position:61930:-1
position: 61930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62196:-1
position: 62196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61930-62196:-1:exon

AVI_RS23205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23205
old locus tag: Avi_9587
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020048121.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MLAQPYQLYIERTDPARNLARYYVLEITETLFGEACLTRTWGRIGTGGQAKAHLFDREEEAVRLFLDLTKQKRARGYRPRQTVLTPRS
SIO_010081: AVI_RS23205
subclass of: SO_0000673
so part of: AVI_RS23205
location: complement(61930..62196)
location: region:61930-62196:-1
so has part: feature:61930-62196:-1:exon

WP_244427800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61930-62196:-1:exon

AVI_RS23210
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: traG
locus tag: AVI_RS23210
old locus tag: Avi_9589
so part of: sequence
location: complement(62749..64704)
location: region:62749-64704:-1
so has part: feature:62749-64704:-1:exon
subclass of: SO_0000010

position:62749:-1
position: 62749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64704:-1
position: 64704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62749-64704:-1:exon

AVI_RS23210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: traG
locus tag: AVI_RS23210
old locus tag: Avi_9589
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010892380.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer system protein TraG
translation: MLPKKMMLVIVPAALMLALTIGMKGIEFWLAGFGTSPQAYQALGRVGLTVPYATAALVGVIFLFSTRGSLLIQWAGWGVLIGGFLSMALGVGGEGFRLIAIRSSQPNALLLPLVDWFTIAGATACFFIAIFGLKVGQRGNMAFGRTGPKRLKGTRAVHGANDWMSLSHAAKLFPPIGGIVVGENYRPDQDSIGQVGFDPRRKETWGKGGKAPLLGFDAGFGSTHGLVFAGSGGFKTTSVVIPTALTFKGSMIVLDPSTEIAPMVSEHRTRNHQEVVSLDPRLPHIGFNVLDWIGKHGNTPEEDIASVAAWLMSEKPRVSSGSDDFFRTTAEQLIAAVIADVMLTDLDEIEDDPDEDPEFKTGEKSLRMVRKRLAQPEKTLQKKLEKIHKNTSSRFVRENVAPFINMTEQTFSGVYATATKETHWLSYENYAAVVSGRSFHTEDIASGNMTVFINIDLSTLENHPGMARVIIGAFLKALYNRNGDVSERALFLLDEAARLGYMRIIETARDAGRKYGITLLMLFQSLGQMREAFGGRDATSKWFESASWVSFSAVNDTDTADYISRRCGTTTIEVDQVTRNSNGGRNGRTRSKQISQRPLILPYEVMQMRTDEQIIFTSGNPPLRCGRAIYFRREEMASRVGPSNFAPKAAG
SIO_010081: AVI_RS23210
subclass of: SO_0000673
so part of: AVI_RS23210
location: complement(62749..64704)
location: region:62749-64704:-1
so has part: feature:62749-64704:-1:exon

WP_041699188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62749-64704:-1:exon

AVI_RS23215
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23215
old locus tag: Avi_9590
pseudo: true
so part of: sequence
location: complement(<64697..64903)
location: region:64697-64903:-1
so has part: feature:64697-64903:-1:exon
subclass of: SO_0000010

position:64697:-1
position: 64697
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:64903:-1
position: 64903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64697-64903:-1:exon

AVI_RS23215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23215
old locus tag: Avi_9590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501745.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
SIO_010081: AVI_RS23215
subclass of: SO_0000673
so part of: AVI_RS23215
location: complement(<64697..64903)
location: region:64697-64903:-1
so has part: feature:64697-64903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64697-64903:-1:exon

AVI_RS23220
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23220
old locus tag: Avi_9593
so part of: sequence
location: complement(64932..65156)
location: region:64932-65156:-1
so has part: feature:64932-65156:-1:exon
subclass of: SO_0000010

position:64932:-1
position: 64932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65156:-1
position: 65156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64932-65156:-1:exon

AVI_RS23220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23220
old locus tag: Avi_9593
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006470240.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraC family protein
translation: MAKRTKSPAEIKAAMEALKVELKEAEAREAERLGSLAVKAGLHEIDIDDAVLVSALKELAARFQSSSQLSNTTA
SIO_010081: AVI_RS23220
subclass of: SO_0000673
so part of: AVI_RS23220
location: complement(64932..65156)
location: region:64932-65156:-1
so has part: feature:64932-65156:-1:exon

WP_012655078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64932-65156:-1:exon

AVI_RS31530
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: traA
locus tag: AVI_RS31530
pseudo: true
so part of: sequence
location: 65368..>67593
location: region:65368-67593:1
so has part: feature:65368-67593:1:exon
subclass of: SO_0000010

position:65368:1
position: 65368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67593:1
position: 67593
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65368-67593:1:exon

AVI_RS31530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: traA
locus tag: AVI_RS31530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875410.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
SIO_010081: AVI_RS31530
subclass of: SO_0000673
so part of: AVI_RS31530
location: 65368..>67593
location: region:65368-67593:1
so has part: feature:65368-67593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65368-67593:1:exon

AVI_RS31535
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31535
so part of: sequence
location: 68599..69438
location: region:68599-69438:1
so has part: feature:68599-69438:1:exon
subclass of: SO_0000010

position:68599:1
position: 68599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69438:1
position: 69438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68599-69438:1:exon

AVI_RS31535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31535
inference: COORDINATES: protein motif:HMM:NF037136.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BID domain-containing protein
translation: MGQAVSRQTATAAAPSQPWLRGIATWARSISQFVEAKVQGDATLTVHWTKINERLKFIYEKPDEAMKAMNLAPALNGDDATAKAAQDRIINQLASNPEAYGAIRGKTGMLASGAAKAQRQNALGHVDPLAKSIRDYVRIRAEVQELHTGTLRQERNRQRVDVPSISSNANHTLERIRDAVDRNDLHSQLGFALSDRIVRAEIEGLNKVLDEKFGANTFSSAEPQGRKFDAAAAKVTPDDHGKLAQSWPLFNAAQKVAAHQKEQAQAQARTQVQKAGMTR
SIO_010081: AVI_RS31535
subclass of: SO_0000673
so part of: AVI_RS31535
location: 68599..69438
location: region:68599-69438:1
so has part: feature:68599-69438:1:exon

WP_244427804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68599-69438:1:exon

AVI_RS23230
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: traF
locus tag: AVI_RS23230
old locus tag: Avi_9596
so part of: sequence
location: 69435..69968
location: region:69435-69968:1
so has part: feature:69435-69968:1:exon
subclass of: SO_0000010

position:69435:1
position: 69435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69968:1
position: 69968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69435-69968:1:exon

AVI_RS23230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: traF
locus tag: AVI_RS23230
old locus tag: Avi_9596
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006470242.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0008233 - peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transfer signal peptidase TraF
translation: MSARRNALAILGVGAVLIGGIAGTFAIGGYRINFTPSYNLGLWQIGALDREVRPGDRIFICPLAGAAVSLALERHYLPRGLCPSGSGPLIKTVAATAGQSVEIGGQVIIDGKPLHSSRVLKADAEGRPMPVYAGGTIPEGKIFLHSEFVGSYDSRYFGPLPADGVLGLAREILTFSP
SIO_010081: AVI_RS23230
subclass of: SO_0000673
so part of: AVI_RS23230
location: 69435..69968
location: region:69435-69968:1
so has part: feature:69435-69968:1:exon

WP_012655080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69435-69968:1:exon

AVI_RS23235
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23235
old locus tag: Avi_9597
so part of: sequence
location: 69931..71127
location: region:69931-71127:1
so has part: feature:69931-71127:1:exon
subclass of: SO_0000010

position:69931:1
position: 69931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71127:1
position: 71127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69931-71127:1:exon

AVI_RS23235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23235
old locus tag: Avi_9597
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006470243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraB
translation: MASREKFSRSLRNLTPRNLAINAAFVAGGCITGAAGWSGHALTLPIGIAFPALWAFAPSRIVAALVAAAYFLGASRGLPVGTSIFFGEQLAIGISFWLAASILFVIVHAALWASKGGRHRPLRYAVAAVMMSVPPFGITGWASPITAAGVLFPGWGWYGLTAMAVGLVIMTTKYWPTAALVLGGFYAWSATSWTAPTVPDRLAGINTQFKFTTAGQYADYAQHLETIAMVRQAVGQGASVVVLPESAFGLWSHTTESLWQGELTGLDVRIIGGAAVVDPTGYDNTMIELTPKTSQILYSQRMPVPVSMWQPWATGGADAQFFGNPYVIIEGKRAAPLICYELLLVWPVLQSMMYEPDMIVAVGNGWWTGGSNIVSILKASGEAWASLFGLPLVMAFNM
SIO_010081: AVI_RS23235
subclass of: SO_0000673
so part of: AVI_RS23235
location: 69931..71127
location: region:69931-71127:1
so has part: feature:69931-71127:1:exon

WP_244427793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69931-71127:1:exon

AVI_RS23240
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23240
so part of: sequence
location: 71142..71564
location: region:71142-71564:1
so has part: feature:71142-71564:1:exon
subclass of: SO_0000010

position:71142:1
position: 71142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71564:1
position: 71564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71142-71564:1:exon

AVI_RS23240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23240
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVEFWIVFIIVQLEKLRAFDPRVGWLLALGAMVLHLGVALVLRNSGWIGAGGALVIILGVLTIARPLIRRGDETVIRAKGAVAKQVREVEGRVVDADPVEASQQQLDVRAELQHGPTLVIVGTAINGYGSLIAGNFFGW
SIO_010081: AVI_RS23240
subclass of: SO_0000673
so part of: AVI_RS23240
location: 71142..71564
location: region:71142-71564:1
so has part: feature:71142-71564:1:exon

WP_041699190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71142-71564:1:exon

AVI_RS23245
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23245
old locus tag: Avi_9599
so part of: sequence
location: 71569..72201
location: region:71569-72201:1
so has part: feature:71569-72201:1:exon
subclass of: SO_0000010

position:71569:1
position: 71569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72201:1
position: 72201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71569-72201:1:exon

AVI_RS23245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23245
old locus tag: Avi_9599
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006470244.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraH family protein
translation: MIDAALIQQCADPRLSVETVQTFVEEVGATDHLTVTVKSGDRTYAVPRPKTAEEAMALAREYIGQAVVRVGLTQYPAGLGAVDKSQLSMDLFEPCHNLRMGTALFAKIYRIVTKWYGNPRSEAFDDALWSYGTGVFEGERIFYAEDPGDVKLAEPKATESQETGVSSAEATSDEGPSEPPFKSEDPNKASMRIDLSGIKAHNSEPKSTGE
SIO_010081: AVI_RS23245
subclass of: SO_0000673
so part of: AVI_RS23245
location: 71569..72201
location: region:71569-72201:1
so has part: feature:71569-72201:1:exon

WP_041699251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71569-72201:1:exon

AVI_RS23250
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23250
so part of: sequence
location: 72198..72563
location: region:72198-72563:1
so has part: feature:72198-72563:1:exon
subclass of: SO_0000010

position:72198:1
position: 72198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72563:1
position: 72563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72198-72563:1:exon

AVI_RS23250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006470245.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thermonuclease family protein
translation: MNAHILVTIMLCTLQCEPTEVRIWDGDTFRIGSRSGEAVRIFNIDAPEIAGKCRYETDLAQRSKQRLASILQSGKVEIQRQDTDRYGRTLATVRVKGRDAGDTLVKEGLARIWSGRREPWC
SIO_010081: AVI_RS23250
subclass of: SO_0000673
so part of: AVI_RS23250
location: 72198..72563
location: region:72198-72563:1
so has part: feature:72198-72563:1:exon

WP_049777420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72198-72563:1:exon

AVI_RS30675
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS30675
so part of: sequence
location: complement(72574..72849)
location: region:72574-72849:-1
so has part: feature:72574-72849:-1:exon
subclass of: SO_0000010

position:72574:-1
position: 72574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72849:-1
position: 72849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72574-72849:-1:exon

AVI_RS30675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS30675
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRGEQIARVQCAEARRRLLCEHCSFERSAQDDRPDATQHYGASRAAGLKFRDDTDTDTDTDTDTDTEELVRNDGGFKDFVRASTLFVELL
SIO_010081: AVI_RS30675
subclass of: SO_0000673
so part of: AVI_RS30675
location: complement(72574..72849)
location: region:72574-72849:-1
so has part: feature:72574-72849:-1:exon

WP_148213976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72574-72849:-1:exon

AVI_RS23255
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23255
so part of: sequence
location: 73198..73470
location: region:73198-73470:1
so has part: feature:73198-73470:1:exon
subclass of: SO_0000010

position:73198:1
position: 73198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73470:1
position: 73470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73198-73470:1:exon

AVI_RS23255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKELDAMMEAHRETVQGLAACVQKMQSPDNTLCSFGNLIDATLAEEKARRSLFRYVPATLSAKRKHLIYKIGFLIVTHSWLYENIPLVG
SIO_010081: AVI_RS23255
subclass of: SO_0000673
so part of: AVI_RS23255
location: 73198..73470
location: region:73198-73470:1
so has part: feature:73198-73470:1:exon

WP_041699192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73198-73470:1:exon

AVI_RS23265
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23265
so part of: sequence
location: complement(73989..74414)
location: region:73989-74414:-1
so has part: feature:73989-74414:-1:exon
subclass of: SO_0000010

position:73989:-1
position: 73989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74414:-1
position: 74414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73989-74414:-1:exon

AVI_RS23265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23265
EC number: 4.1.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018237450.1
GO function: GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO process: GO:0006523 - alanine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate 1-decarboxylase
translation: MRRFVAAKLHGIHVTDANLDYHGSVTLDPDHCEEAHILPMEFVDIWNKQSGARISTYVILGERGSRCCILNGAAARTCQVGDQVIICNSIYQNEENISCLTPIVLTFDENNYVKDRLMYSVSKDTLGRHTFEILNRARPVP
SIO_010081: AVI_RS23265
subclass of: SO_0000673
so part of: AVI_RS23265
location: complement(73989..74414)
location: region:73989-74414:-1
so has part: feature:73989-74414:-1:exon

WP_041699194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73989-74414:-1:exon

AVI_RS23270
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23270
old locus tag: Avi_9606
so part of: sequence
location: complement(74455..75183)
location: region:74455-75183:-1
so has part: feature:74455-75183:-1:exon
subclass of: SO_0000010

position:74455:-1
position: 74455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75183:-1
position: 75183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74455-75183:-1:exon

AVI_RS23270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23270
old locus tag: Avi_9606
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011376889.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008146 - sulfotransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfotransferase family 2 domain-containing protein
translation: MKRLFWLHIKKSGGMSTRQLLRNHYVQVDRSKKPYCFLLAKEPEYNDILNNYRIPLGEYQFKRTLFAREWLYKDVWHEMVSFAFCREPLSRCISAFFYLWEAEAQRRAWLPSFNGALNAHGYGLDYSFDQFLDAVVACRDSGSNFSPMGLHFSTHTATMWDDVTDSGGSILLSNIFRLEDLIHGINHVFSVCGVPDKAKPLLRDINTNETKRPFTPSRHHIAKVEDLYGKDFELYETYGRLF
SIO_010081: AVI_RS23270
subclass of: SO_0000673
so part of: AVI_RS23270
location: complement(74455..75183)
location: region:74455-75183:-1
so has part: feature:74455-75183:-1:exon

WP_041699197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74455-75183:-1:exon

AVI_RS23275
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: hisC
locus tag: AVI_RS23275
old locus tag: Avi_9607
so part of: sequence
location: complement(75240..76346)
location: region:75240-76346:-1
so has part: feature:75240-76346:-1:exon
subclass of: SO_0000010

position:75240:-1
position: 75240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76346:-1
position: 76346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75240-76346:-1:exon

AVI_RS23275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: hisC
locus tag: AVI_RS23275
old locus tag: Avi_9607
EC number: 2.6.1.9
inference: COORDINATES: protein motif:HMM:TIGR01141.1
GO function: GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidinol-phosphate transaminase
translation: MSNSCQLVFPSHIERLPRYRPAADLAVVSETSAEPLVNLASNENPYGTNPGFADALNEITRFNLAEYPDPDALRLKTAIAAKNHVSIDQLIIANGSDELIDLSARTLLAPGTNAIFDEYSFVAYRKATYLAGATGVSVRPSGWNADLNEMLRVIDTNTRMIFLANPSNPTPGFISTAEFDSFISRVPATVLVVLDEAYIDFVEPNERIDCKLLLQSRSNVFITRTFSKAYGLAGVRVGYGIGSPTLINMMNRIRQPFSVGVLPQLAAVNALANEGFVNETRAKNIEQKARLSEGLSDLGIEHAASKGNFIIVKLRAPSAAHEALQAKRILVRRLASYGLSDWLRLTIGTESQNRIVLDAFRTLTQQAN
SIO_010081: AVI_RS23275
subclass of: SO_0000673
so part of: AVI_RS23275
location: complement(75240..76346)
location: region:75240-76346:-1
so has part: feature:75240-76346:-1:exon

WP_012655087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75240-76346:-1:exon

AVI_RS23280
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23280
old locus tag: Avi_9608
so part of: sequence
location: complement(76409..77671)
location: region:76409-77671:-1
so has part: feature:76409-77671:-1:exon
subclass of: SO_0000010

position:76409:-1
position: 76409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77671:-1
position: 77671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76409-77671:-1:exon

AVI_RS23280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23280
old locus tag: Avi_9608
inference: COORDINATES: protein motif:HMM:NF012885.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isopropylmalate/homocitrate/citramalate synthase
translation: MSDLILETALSNRVIFHEEVARDGAQGKTLLNGHQRVQIAKRHSSIFGEFAPYHLVFNAGFPSAGKDELEATRQVVDCVDECYVGAAGRATRQDVDLLLQAVHGARHGRIFIAVPASNPMAYSMMHCTAEKAKQAALDMVRYARDKNPALMVDVALADASRSDVGFLAASAAEYAAAGASMVIVCDTVGQFFPSESRWFFDELARRSDPDLRYVAHMHNDLGFGLVNTLEALSAKIYGLTSSWLSLGERAGMPATEQLLFALGYQSSLLPKKLGVVDEIWRSPPDLRQLSPIARYVSQSTRRPLMTTDPIVGTGVNTISTGTPFTNPALFQPFDPLEILGVEPKVLLSSLASHRIIHAVAARLGWALDQSQASAALEWVKAEAFSRNVAIIEDEDFEHFLKGANFAQTSAAAKDHLRISR
SIO_010081: AVI_RS23280
subclass of: SO_0000673
so part of: AVI_RS23280
location: complement(76409..77671)
location: region:76409-77671:-1
so has part: feature:76409-77671:-1:exon

WP_012655088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76409-77671:-1:exon

AVI_RS23285
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23285
old locus tag: Avi_9609
so part of: sequence
location: complement(77770..78645)
location: region:77770-78645:-1
so has part: feature:77770-78645:-1:exon
subclass of: SO_0000010

position:77770:-1
position: 77770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78645:-1
position: 78645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77770-78645:-1:exon

AVI_RS23285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23285
old locus tag: Avi_9609
EC number: 1.1.-.-
inference: COORDINATES: protein motif:HMM:NF015411.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent oxidoreductase
translation: MTGLTERPRIGLVGVGKMGRALATRLLSCGVEVFGCDPAAQNPPDGLQFVATPRQLADCCDVVMGCVSGQEAFREVTLGPNGIRGGTRVHTYANVGTTGPSLVKEIAHGLAEVDIRTIDVPMTGGPRRAARGEVTVIASGPLKVLQAVSPTLEKYSSKIVYVGPGVGQAQYVKVINNLVTAGNLAVAIEALTLAKKATISRELLLEVINSGSAASDVSTSKIPSHVLTRTFDFGASLALVDHDLSCCLHEARLIDCEMRVSKAVLDVYRSAIEAGSALDDITTLAVYLENR
SIO_010081: AVI_RS23285
subclass of: SO_0000673
so part of: AVI_RS23285
location: complement(77770..78645)
location: region:77770-78645:-1
so has part: feature:77770-78645:-1:exon

WP_148213977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77770-78645:-1:exon

AVI_RS23290
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23290
old locus tag: Avi_9610
so part of: sequence
location: complement(78790..80637)
location: region:78790-80637:-1
so has part: feature:78790-80637:-1:exon
subclass of: SO_0000010

position:78790:-1
position: 78790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80637:-1
position: 80637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78790-80637:-1:exon

AVI_RS23290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23290
old locus tag: Avi_9610
inference: COORDINATES: protein motif:HMM:NF012869.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSSEVSSEGLFGRLINWLQQLVAITPAVENIVLPDRIGKFYCFFLIQAWRPLLWLLAIGTAVATADAIIPVAISHFVQLLGENSTSFPTSTVAVIVLFMLAHPLLTSAQRLIVNHSISANIATLVRWQSHSYIARQPISFFNSDLTGKLANRVLQTGPALRDTIVTVVTSVWYIVIFIATTIFFLAQADVRLIVPTLIWVISYLLLLRVFLPRMNRHSRDMSSMRSLVSGRLVDSYSNIQTVKLYSHDGSENSYIKHGLVTHNEANQKLLAQNSFFGTALSFINGTLISSTLALSLWLSKNHAVEPSQFAMILPLVWHIANTSTAITQQMSSIFENFGVVQEGMRSITAPFPPEDGSCSEELRVHEPTVVFQNVTFRYPRSSAAVVSLNFSINSHERVAIVGSSGAGKSTIIGLLLRLYEADQGTVSICGQDIRSVSVRSLRASIAVVSQETSILNRSVFDNISFGMPHTSASEVVEAATMAGAHEFIRQLRDKDGRVGYAAHAGERGVKFSGGQRQRIAIARALLKNSPIIVLDEATSALDSESEFELKKRLEPLLRHKTVIAIAHRLGTIKDFDRIIVLEGGRIVEMGSHEQLLRSEGRYALLWNRQIEGISN
SIO_010081: AVI_RS23290
subclass of: SO_0000673
so part of: AVI_RS23290
location: complement(78790..80637)
location: region:78790-80637:-1
so has part: feature:78790-80637:-1:exon

WP_012655090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78790-80637:-1:exon

AVI_RS23295
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23295
old locus tag: Avi_9611
so part of: sequence
location: complement(80698..81372)
location: region:80698-81372:-1
so has part: feature:80698-81372:-1:exon
subclass of: SO_0000010

position:80698:-1
position: 80698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81372:-1
position: 81372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80698-81372:-1:exon

AVI_RS23295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23295
old locus tag: Avi_9611
inference: COORDINATES: protein motif:HMM:NF015527.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008146 - sulfotransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfotransferase family 2 domain-containing protein
translation: MEVAEGEFKPAFPIKPAQQLVFVHIPKCGGTSMHQFLANAKKVQPEPELSTILAGYCEPALHKHSKAAVIRDLVGPALWQTIFTFSVVRNPWDLMLSSYRWWLQKAGRFSSLRAQADEVADLGSFEGFLKSDFGGNRINECEGDILSWLSDENGQEIVDFVGRLEDIEQALQNVFERAGLAGYSEFPRLNSTVRGGYQDYYNAETKRLIQTRFQATIDRFEYQF
SIO_010081: AVI_RS23295
subclass of: SO_0000673
so part of: AVI_RS23295
location: complement(80698..81372)
location: region:80698-81372:-1
so has part: feature:80698-81372:-1:exon

WP_012655091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80698-81372:-1:exon

AVI_RS29295
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS29295
old locus tag: Avi_9612
so part of: sequence
location: complement(81422..82090)
location: region:81422-82090:-1
so has part: feature:81422-82090:-1:exon
subclass of: SO_0000010

position:81422:-1
position: 81422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82090:-1
position: 82090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81422-82090:-1:exon

AVI_RS29295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS29295
old locus tag: Avi_9612
inference: COORDINATES: protein motif:HMM:NF012610.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MTRQTCNDSTTSYAIYDRLKNKVMSYEFSPSQQLQPWTLADEFKVSSTPVREALIRLGAEGLVAVMPNKGFFMKPLNPSEICSLYVLRSQLLRYSLRYLLEQSRFSDHRSFVTVWEERLSDLSASSCALIEEFFMDWVDVSRAQACVDTLQNTNERTRFIRCLFTEEPARSRRYLGILRDLVRHIKRSNADDAIDCLITELDFKVTSVPALCNEGLVRSFRN
SIO_010081: AVI_RS29295
subclass of: SO_0000673
so part of: AVI_RS29295
location: complement(81422..82090)
location: region:81422-82090:-1
so has part: feature:81422-82090:-1:exon

WP_012655092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81422-82090:-1:exon

AVI_RS23305
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23305
old locus tag: Avi_9615
so part of: sequence
location: 82483..82893
location: region:82483-82893:1
so has part: feature:82483-82893:1:exon
subclass of: SO_0000010

position:82483:1
position: 82483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82893:1
position: 82893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82483-82893:1:exon

AVI_RS23305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23305
old locus tag: Avi_9615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015886710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 transposase-related protein
translation: MAKHPIELRVRVVAFVEEGNSHREAARHFRVSPRFVNNMVILKRASGALRPARQGHLGGGKLTGHEDWVRERLPRTVAENGDLTLDELGVELHGRGVSVDRSAICRLLHRLGISHKKSLRASELSMPREFPPIVPK
SIO_010081: AVI_RS23305
subclass of: SO_0000673
so part of: AVI_RS23305
location: 82483..82893
location: region:82483-82893:1
so has part: feature:82483-82893:1:exon

WP_049777425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82483-82893:1:exon

AVI_RS23310
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: istB
locus tag: AVI_RS23310
old locus tag: Avi_9616
pseudo: true
so part of: sequence
location: complement(82904..>83654)
location: region:82904-83654:-1
so has part: feature:82904-83654:-1:exon
subclass of: SO_0000010

position:82904:-1
position: 82904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83654:-1
position: 83654
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82904-83654:-1:exon

AVI_RS23310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: istB
locus tag: AVI_RS23310
old locus tag: Avi_9616
inference: COORDINATES: similar to AA sequence:RefSeq:WP_071831742.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21-like element ISRel3 family helper ATPase IstB
SIO_010081: AVI_RS23310
subclass of: SO_0000673
so part of: AVI_RS23310
location: complement(82904..>83654)
location: region:82904-83654:-1
so has part: feature:82904-83654:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82904-83654:-1:exon

AVI_RS23320
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23320
old locus tag: Avi_9617
pseudo: true
so part of: sequence
location: complement(<83760..84236)
location: region:83760-84236:-1
so has part: feature:83760-84236:-1:exon
subclass of: SO_0000010

position:83760:-1
position: 83760
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:84236:-1
position: 84236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83760-84236:-1:exon

AVI_RS23320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23320
old locus tag: Avi_9617
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012976703.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: AVI_RS23320
subclass of: SO_0000673
so part of: AVI_RS23320
location: complement(<83760..84236)
location: region:83760-84236:-1
so has part: feature:83760-84236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83760-84236:-1:exon

AVI_RS23325
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23325
old locus tag: Avi_9618
pseudo: true
so part of: sequence
location: <84460..>84710
location: region:84460-84710:1
so has part: feature:84460-84710:1:exon
subclass of: SO_0000010

position:84460:1
position: 84460
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:84710:1
position: 84710
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84460-84710:1:exon

AVI_RS23325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23325
old locus tag: Avi_9618
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611156.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AVI_RS23325
subclass of: SO_0000673
so part of: AVI_RS23325
location: <84460..>84710
location: region:84460-84710:1
so has part: feature:84460-84710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84460-84710:1:exon

AVI_RS23330
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23330
old locus tag: Avi_9620
so part of: sequence
location: 84801..85253
location: region:84801-85253:1
so has part: feature:84801-85253:1:exon
subclass of: SO_0000010

position:84801:1
position: 84801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85253:1
position: 85253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84801-85253:1:exon

AVI_RS23330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23330
old locus tag: Avi_9620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014531097.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MADDGFVGRYKVVEPRRGNRRWPDDVKARIVAESFEPGVRVVDVARRHGVIANQLSDWRRQVRDGILALPFTAATTLSEHDGIEPAFVPLAIAAEPPEPVNRLSLPKLASEGPQAQVLTLEIGSDVVMRVPNDVPVERVAALVRAVRGAS
SIO_010081: AVI_RS23330
subclass of: SO_0000673
so part of: AVI_RS23330
location: 84801..85253
location: region:84801-85253:1
so has part: feature:84801-85253:1:exon

WP_012655097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84801-85253:1:exon

AVI_RS23335
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: tnpB
locus tag: AVI_RS23335
old locus tag: Avi_9622
so part of: sequence
location: 85269..85622
location: region:85269-85622:1
so has part: feature:85269-85622:1:exon
subclass of: SO_0000010

position:85269:1
position: 85269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85622:1
position: 85622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85269-85622:1:exon

AVI_RS23335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: tnpB
locus tag: AVI_RS23335
old locus tag: Avi_9622
inference: COORDINATES: protein motif:HMM:NF017528.2
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIVAGQRLPILIATRPVDFRCGHQALALMVQTELKLDPHSGVTVIFRSKRGDRLKILVWDGTGMVLIYKILEHGNFAWPKVQDGTMRLSRGQYEALFEGLDWRRVMAQRVTAPSAAG
SIO_010081: AVI_RS23335
subclass of: SO_0000673
so part of: AVI_RS23335
location: 85269..85622
location: region:85269-85622:1
so has part: feature:85269-85622:1:exon

WP_007602186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85269-85622:1:exon

AVI_RS23340
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23340
old locus tag: Avi_9623
pseudo: true
so part of: sequence
location: 85686..87354
location: region:85686-87354:1
so has part: feature:85686-87354:1:exon
subclass of: SO_0000010

position:85686:1
position: 85686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87354:1
position: 87354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85686-87354:1:exon

AVI_RS23340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23340
old locus tag: Avi_9623
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612018.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family transposase
SIO_010081: AVI_RS23340
subclass of: SO_0000673
so part of: AVI_RS23340
location: 85686..87354
location: region:85686-87354:1
so has part: feature:85686-87354:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85686-87354:1:exon

AVI_RS29850
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS29850
old locus tag: Avi_9625
pseudo: true
so part of: sequence
location: <87498..87717
location: region:87498-87717:1
so has part: feature:87498-87717:1:exon
subclass of: SO_0000010

position:87498:1
position: 87498
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:87717:1
position: 87717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87498-87717:1:exon

AVI_RS29850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS29850
old locus tag: Avi_9625
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006473471.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AVI_RS29850
subclass of: SO_0000673
so part of: AVI_RS29850
location: <87498..87717
location: region:87498-87717:1
so has part: feature:87498-87717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87498-87717:1:exon

AVI_RS23345
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23345
old locus tag: Avi_9626
so part of: sequence
location: complement(87689..89086)
location: region:87689-89086:-1
so has part: feature:87689-89086:-1:exon
subclass of: SO_0000010

position:87689:-1
position: 87689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89086:-1
position: 89086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87689-89086:-1:exon

AVI_RS23345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23345
old locus tag: Avi_9626
inference: COORDINATES: protein motif:HMM:NF012427.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MARFLFLIDDFAGHLFATVGLAQRAHEAGHQVLFVSSAAAIEKVRNKGVPVLAEDRFILSRNIVMSWGELRRRNSNRSRRVDHFLEIRGIVRSLVDRFRPDLVLFDPFLLHLFPFFWEVNANCASVSTKPLLTQDPQVPPYTFRYCPKTTRTSRAAILALWWLQKLKFSGDCLRDKFEELAIGVSSRSNINVTSAIANFPLSTMWKSRPVRFDKAFWSMPEIVLQAKEFDFPRVNSVPDAYFIGPCVAHDDDEADVPLKYPEGTGPLVYCSLGTVRRGETHRMIDFYRKVIRGVGVKGGYRLLVATGSREEATKLASEFEGYGNIVILGWASQRQVLTDASILITHGGGTSIKEAISKCVPMVVFPRRADQPGCASRVVYHRLGTAHSFRTCTEKSIKAAVDNLILNSSFRDRVRTLNEAFAGYDAEDIPMRTLTRLVTTGAKQCHRHEDLLKQVASIPPHSLQL
SIO_010081: AVI_RS23345
subclass of: SO_0000673
so part of: AVI_RS23345
location: complement(87689..89086)
location: region:87689-89086:-1
so has part: feature:87689-89086:-1:exon

WP_012655099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87689-89086:-1:exon

AVI_RS23350
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: cysC
locus tag: AVI_RS23350
old locus tag: Avi_9629
so part of: sequence
location: complement(89159..91069)
location: region:89159-91069:-1
so has part: feature:89159-91069:-1:exon
subclass of: SO_0000010

position:89159:-1
position: 89159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91069:-1
position: 91069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89159-91069:-1:exon

AVI_RS23350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: cysC
locus tag: AVI_RS23350
old locus tag: Avi_9629
EC number: 2.7.1.25
inference: COORDINATES: protein motif:HMM:NF004035.0
GO function: GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
GO process: GO:0006790 - sulfur compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylyl-sulfate kinase
translation: MRQEIRTRLERSHAQQVQKSLLRFMTCGSVDDGKSTLLGRLLYDCNALYDDQLESLRCTNGQITTLPIDFSVLLDGLAAEREQGITIDVAYRYFSTASRRFILADTPGHAQFTRNMATAASVTDLAIILIDARKGLLEQTRRHTTIASFLGIQNFILAVNKMDLVNYDHGIFERTSRSFKVFSEGLGIQNFSAIPVVATDGDNVTTRSERMPWFKGATLIDLLDNVEVPSQGCNKHFRFPVQYVIKSGDFRGFCGKVAAGAAAVGDPVREARSGKLTVISRITVAGCPTGQVTSGQSATISLADDIELARGNILTQLDTPPHATDQLCAMIIWFHEKALLPGRSYLLRTQIDQVAVTVTSLKSRVNIDSGREEAASELRQNEIGMCNLRMQQPICFDEYKKNRETGSFIIIDRMTNETAGAGMIMHSLRRAGNITWQVQEVDREARSLIKNQKPVVLWFTGLSGAGKSTIANLLEKRLHARGQHSYLLDGDNLRHGLNYDLGFKAADRVENIRRVTEVARLMADAGLIVIVSVISPFHAERQAAKDKIGPETFVEIFVDTPLEECVRRDPKGLYIRALTGEIPNFTGIDSPYENPESPDLTITTLALTPEEAAVGIERWLVAHRYITDLSSAKSTS
SIO_010081: AVI_RS23350
subclass of: SO_0000673
so part of: AVI_RS23350
location: complement(89159..91069)
location: region:89159-91069:-1
so has part: feature:89159-91069:-1:exon

WP_012655100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89159-91069:-1:exon

AVI_RS23355
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: cysD
locus tag: AVI_RS23355
old locus tag: Avi_9630
so part of: sequence
location: complement(91069..91977)
location: region:91069-91977:-1
so has part: feature:91069-91977:-1:exon
subclass of: SO_0000010

position:91977:-1
position: 91977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91069-91977:-1:exon

AVI_RS23355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: cysD
locus tag: AVI_RS23355
old locus tag: Avi_9630
EC number: 2.7.7.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006206275.1
GO function: GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
GO process: GO:0019419 - sulfate reduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfate adenylyltransferase subunit CysD
translation: MHVSQPHHLDYLEAEAINIFREVIATFERPVILYSVGKDSSVLLHIAQKAVHPARLEVPLLHIDTTWKFKEMIAFRDETAVTNGLKLIVHTNHEAVRDNINPFEHTLDTYTHQMKTIALRQALEAGGFDAAVGGARRDEEKSRAKERIFSLRSFNHSWDPKNQRPEMWNIFNTNLSQGQTMRVFPLSNWTELDIWEYISCKNIPIVSLYTSAQRPVVRRGRQWIVVDDERFILQSGETPEYRNVRFRTLGCYPLTAAVESNASSVKKIIREMKTTRMSERQGRIADSDPASSMERKKREGYF
SIO_010081: AVI_RS23355
subclass of: SO_0000673
so part of: AVI_RS23355
location: complement(91069..91977)
location: region:91069-91977:-1
so has part: feature:91069-91977:-1:exon

WP_041699266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91069-91977:-1:exon

AVI_RS23360
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23360
old locus tag: Avi_9632
so part of: sequence
location: complement(92048..93142)
location: region:92048-93142:-1
so has part: feature:92048-93142:-1:exon
subclass of: SO_0000010

position:92048:-1
position: 92048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93142:-1
position: 93142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92048-93142:-1:exon

AVI_RS23360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23360
old locus tag: Avi_9632
EC number: 1.14.11.-
inference: COORDINATES: protein motif:HMM:NF014698.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TauD/TfdA family dioxygenase
translation: MAANEIAANIVTNAVGWRRADTRDPSAWTYTISNAEREEIEVAFAQASESGLDTHELTHKEFPLPNFGLRLHSLTKELENGLGFRLIKGLPINDKDEAGARLISWGLGLYIGVALPQNSDGALIHDVRDRGETSAATLRGNGTSEEIQFHIDPCDVVALFCRRSAAVGGQSRLCSSIEIHNRLAMEDPDLLEVLYSMLPFASLGSAPPDAHVYNTPVFGWKNGLFTSHFYRARIIHAGSLPSVNLSPEQRRAVDRVSEIASNPDMYLEMNLEPGDLQLVNNHILYHARSSYEDYPDPDLRRHLFRLWFSVPDSRELPDEFAGFWGTTEAGSVRGGVRSWQDKYQHVSRYQKAIAEYHGMAVAKS
SIO_010081: AVI_RS23360
subclass of: SO_0000673
so part of: AVI_RS23360
location: complement(92048..93142)
location: region:92048-93142:-1
so has part: feature:92048-93142:-1:exon

WP_041699204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92048-93142:-1:exon

AVI_RS23365
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: leuD
locus tag: AVI_RS23365
old locus tag: Avi_9634
so part of: sequence
location: complement(93081..93779)
location: region:93081-93779:-1
so has part: feature:93081-93779:-1:exon
subclass of: SO_0000010

position:93081:-1
position: 93081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93779:-1
position: 93779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93081-93779:-1:exon

AVI_RS23365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: leuD
locus tag: AVI_RS23365
old locus tag: Avi_9634
EC number: 4.2.1.33
inference: COORDINATES: protein motif:HMM:NF002458.0
GO component: GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO function: GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO process: GO:0009098 - leucine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydratase small subunit
translation: MTSILVVGTAVPIIEDNVDTDQITPGTELMRSADDSYLRWGGALFAERRYNLDGNLNPDFILNQTEWLGATFLLTGKNFGCGSSREWAAKAIRGYGFKAILAESFGEIFIGNCYRHGIAPIVLSPNEIGQLRHVALQHSPITIDLAKQTISTSPEKKFDFKIPEMYRRMLIEGIDEISFVMRFAPSVENFEKTDRLKRPWMHVTRANNGSKCYGSERDCRKHCHECSWMAAS
SIO_010081: AVI_RS23365
subclass of: SO_0000673
so part of: AVI_RS23365
location: complement(93081..93779)
location: region:93081-93779:-1
so has part: feature:93081-93779:-1:exon

WP_012655103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93081-93779:-1:exon

AVI_RS23370
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23370
old locus tag: Avi_9636
so part of: sequence
location: complement(93776..95194)
location: region:93776-95194:-1
so has part: feature:93776-95194:-1:exon
subclass of: SO_0000010

position:93776:-1
position: 93776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95194:-1
position: 95194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93776-95194:-1:exon

AVI_RS23370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23370
old locus tag: Avi_9636
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014199181.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydratase large subunit
translation: MARTFFEKVWNDHVVTEIDSDTSLLYIDRIFLHELTGASAMRQLENGSRRPRRSDSVFVTIDHVIDTAPGRTKNQSVASLGSAMIQETTEAARRYGFTLFDADDRRQGIVHVISPDLGIALPGVTLVCGDSHTSTVGGVGAIGFGIGSTDCEQILASQTLALKRPRAMRIWVTGILQNGVYPKDLILDLIRNIGANGGLGFAVEFAGPAIAAMSVEGRLTLCNMATEFGAKFGFVAPDEQTFNYLVGRNYAPHGRAWDEAVEYWKSLTTDTDATFDREVSIDCACLEPQITWGTSPQHVVGVASKVPEIEEISPDQRSSALRALDYMHLKPGQQLEGLPVDAAYIGACTNARLADLQAAGSVLRGRRVHPSVLAICVPGSREVKEKAEAEGLHAVFKSAGFEWHEAGCGLCGHMGNDRLKGLRVVSTTNRNFVGRQGPGTMTHLASPVTVAASAILGGIADIRKMENAGSAL
SIO_010081: AVI_RS23370
subclass of: SO_0000673
so part of: AVI_RS23370
location: complement(93776..95194)
location: region:93776-95194:-1
so has part: feature:93776-95194:-1:exon

WP_041699206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93776-95194:-1:exon

AVI_RS29855
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS29855
so part of: sequence
location: 95528..95743
location: region:95528-95743:1
so has part: feature:95528-95743:1:exon
subclass of: SO_0000010

position:95528:1
position: 95528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95743:1
position: 95743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95528-95743:1:exon

AVI_RS29855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS29855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018546573.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MbtH family NRPS accessory protein
translation: MSAFSNPTKLYAVIVNEEGQHSLWLAEKPIPRGWRLQMGPDSRETCLQYVDSNWTDMRPLSLQRNSTRKAT
SIO_010081: AVI_RS29855
subclass of: SO_0000673
so part of: AVI_RS29855
location: 95528..95743
location: region:95528-95743:1
so has part: feature:95528-95743:1:exon

WP_080517059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95528-95743:1:exon

AVI_RS23375
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23375
old locus tag: Avi_9638
so part of: sequence
location: 95783..96763
location: region:95783-96763:1
so has part: feature:95783-96763:1:exon
subclass of: SO_0000010

position:95783:1
position: 95783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96763:1
position: 96763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95783-96763:1:exon

AVI_RS23375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23375
old locus tag: Avi_9638
inference: COORDINATES: protein motif:HMM:NF014698.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TauD/TfdA family dioxygenase
translation: MIELDNIKICPLAGIDDAIIIQSLNKASLTTSTSAIGPAVAEMVTRHGAVLLRGFAPEGTSAMAALFASLQWKPLQYTYRSTPRTSVSEGIYTATEFPASEEIMLHSENAFQADWPTRIGFHCAVPARAGGETPIGSLEKITARIDTGLFDEFRRRGVSYVRNYSDYVDLPWQVVFQSSDRGDVEEYCKNHGIGFEWRNSGLRTWQACQGTATHPERGNEVWFNQAHMFHYTALGPEMASNLLSIFGEEELPRNAYYGDGGVIPKDAVEHIREAFSAERASFGWEKDDILLLDNMRYCHGRNPFEGPRQVLVSMGRGYASVVDSSH
SIO_010081: AVI_RS23375
subclass of: SO_0000673
so part of: AVI_RS23375
location: 95783..96763
location: region:95783-96763:1
so has part: feature:95783-96763:1:exon

WP_012655105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95783-96763:1:exon

AVI_RS23380
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23380
old locus tag: Avi_9641
so part of: sequence
location: 96775..108060
location: region:96775-108060:1
so has part: feature:96775-108060:1:exon
subclass of: SO_0000010

position:96775:1
position: 96775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108060:1
position: 108060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96775-108060:1:exon

AVI_RS23380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23380
old locus tag: Avi_9641
inference: COORDINATES: protein motif:HMM:NF003417.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: non-ribosomal peptide synthetase
translation: MFNRQVSAIARDAQDPSESTRIRSCIIAGEGTLAIRCAQHLMDSGHHLKGVLTSEKVLADWVYAKNITVLRSVEELATLLLDEGPVDWLFSIVNPILLPPNVIARVKGGAFNYHDAPLPRYAGVHATSWAILAEERDYAISWHRISNFVDAGDIVLQRAVPIVDDDTALSLNLKCYQAAAGAFEELISRLTHGKVESYQQDLSQRTFFSRHDRPEADGILQFNRQAKQLSATVRALSFGPYRINTFCRPKLLVADIALGVGALDVLDERSTEPPGTVICVDHKGWRISTFDHDILVRNLVVLETDEDVSPQILAAELEIEPGTQLPILSESEMSRLRRLHIETSKNNSFWQKRLAHANSTSLPFAPSWAEQGRERWRASAWHVLQAFDAIPLETSGSYILTSWLVYLSRVTGKSTIETGWAWQPDDSSSAAVRATLADVVPLQLNVGWVESFDSVRSALSSECATVRVKNTFAKDTFPSKTNLRSSKILRPRRAWDTAVELVDSEVLPQDHPKANVVTFQVDPRKRSFRLIYNAERLSPADVDRITEHLIVLSRSIMTPGNEFVPAHGLEILSRQETELVLEGWNETSVDFPSERCIHQLFERQVAETPDVVAVEQDGISVTYAELNAKANILADKIRMRMTRPDNIVAICVERRIYMITAFIAVVKAGATYLPLDPTNPPEHIADTVADAGAVLILTDTVGAKALSAAVAEGPHTLDIGEAMSAKHPAEIDLVSGFPLIAPSQLAYVIYTSGSTGKPKGVMIEHAGLVNLATWHIKTFGLKTGSRCTLMSRPVFDASVWEMWPALCSGATLVLPPVNLLDDVDVLLKWWHQQDLHVSFLSTPLASIAFQENLTNPNLQSLLVGGDQLRSVPPTLPPKLTLVNNYGPTEATVVATSGEVRAGEPVLTIGRPIANTRAYVLDEYLQPVPHGVVGEIYISGAGVARGYLGRAGLTAEHFVADPFSRVAGKRMYKTGDLGRHLPDGRLHFIGRNDDQIKIRGFRLEPGEIQRQLCEHAGVRDALVIKHDSHELNDYLAAYIVPEQKTLTAGADELRAYLRGYLPEYMVPATFTFLETFPLTQNGKIDRKALPSPIEDPVSRPPYEAPSGHIEQLLATTWQDLLCITRIGTQDNFFELGGHSLLAVKVQARLRQEGLNLKTSDLFSFPTIASLAGKVADADPVLVDHSKIDPNSPLMPSDLPLIDLSKIDIDRIVERAPGGKGNIQDIYALSPLQDGILFHHMLGGIGDAYLLLDLIGFRERVILQRYVEAVQTVVDRHEILRTGFMWHGLTTPAQFVLRKADISVEYVDLDPSAGLAVDQLIERYDPRTYRLDLSEPPLMRFFATRDFQTGHWLLLQLFHHLIADHTTLEILHSEVREIMGGSGSNLPPATPYRNLIAQTRLRAADDEHHRHFFRSMLADIEDPSAPFDMVDVYNDGKDVTESVVTLSVDLDRRLRRHARQLGVSLASICHVAWGIVVARTCGRDAAVFGTVLLGRNQAGGEVDRAMGLFINTLPIRVDLDAVSVGDGICRTHSLLSELMQHEYASLTLAQGCSSVPASIPLFSSLINYRHNDPLQHQADLGCGIERLKFEERTSYPITLSVDDTGVSLGLTVQAVPPVVPGTLSGYMVEALSQIASALEETASVALERLDICDQRTRHKVLVEWNDTRRPISEALLPELFQAQVARTPDAIAVEYEGEQISYAELEARANRMARYLIELGVGPETIVALALPRSIDMVVSLLAVLKSGGAYLPLDPQYPTERLAFMVADAQPATVIAVASTAEKLPEDAPLLLLDDAGVLERISAFSDSAVIETERHAPLDPLHPAYVIYTSGSTGKPKGVVASHESARNRVTAQLWINPPTQADVCCQKTSISFVDSVYELLLPLLGGAHVCIAPDEIGTDLQALLNFIEVHSVTRIVLVPSVAEKLLSLAEAKQKCNTLAVWTLSGEALESNLVATMRRAFPDASVFNLYGSSEIAADAVMHRISDVESEGSVPIGRPIS…
SIO_010081: AVI_RS23380
subclass of: SO_0000673
so part of: AVI_RS23380
location: 96775..108060
location: region:96775-108060:1
so has part: feature:96775-108060:1:exon

WP_012655106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96775-108060:1:exon

AVI_RS23385
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23385
old locus tag: Avi_9643
so part of: sequence
location: 108053..115738
location: region:108053-115738:1
so has part: feature:108053-115738:1:exon
subclass of: SO_0000010

position:108053:1
position: 108053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115738:1
position: 115738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108053-115738:1:exon

AVI_RS23385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23385
old locus tag: Avi_9643
inference: COORDINATES: protein motif:HMM:NF003417.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: non-ribosomal peptide synthetase
translation: MPNIEELLPLSPLQKGLLFHSLYDESGVDVYHIQFTIELRGKCVPEKLRKCADLLLHRYPNIRAGFEYEDLDDPLQVVLDTVDLPWHTVDISDHEEREKEGILDKISAFDRTTRFRADRPPLLRFTFVKLDSDRAYLFFTHHHLILDGWSLPVFLRELFELYDCNGEVEALPSAASYRDYLDWMTSADGESSREAWTQYLLDYDYQRNALHGNVYDAHQPQTVLRTISSSLTQQVLTLSRTVGVTDSTIMQAAWGIFLSLIEARSDVVFGVVVSGRHPEVPDVERIVGLLANTIPLRFRVDGSEKVKALLCRVQSEQAGLIQFHSTSLGDIQRWIGTTNLLESVVVYQNYPLGGESVWRGESFSAEFVDCSGGQSHYPLHLSIFPGRSTEIRLSYQPHLFDRDTVEAFADRFIRLLEAIVSDPEQRLDEIDLLDPDERHKVLVEWNDTRRPISRELLPELFQAQAARTPDAIALECEGEQISYAELEARANRMARYLIELGVGPETIVALALPRSIDMVVSLLAVLKSGGAYLPLDPQYPTERLAFMVADAQPATVIAVASTAEKLPEDAPLLLLDDAGVLERISAFSDSAVIETERHAPLDPLHPAYVIYTSGSTGKPKGVVVNHSGFTNFLAAMTEIFDPFAQTPFYATTSIAFDIAGMELFLPLATGGRLNLSAQSAALQAQETVRALTNAPSGLFQATPSAYRNLAEVHSAGNVAALCGGEQLTSDLAQQILSTYGSLHNLYGPTETTIWSLCAAISDVESEGSVPIGRPISNTFVYVLNDTLQLVPPGVVGELYIAGAGLARGYLRRPGLTAERFVADPFGEAGTRMYRTGDLVKWRSDGILDYLGRADEQVKIRGFRIEPGEIEAALLSHPSVSQAVVIAREDSSGDKKLLGYVVSQSGSLIDAQALRQFLRDRLPDYMVPAAIIALDRLPLSPNGKLDRKALPSPTYEVSVGREPSTPQEELLCGLFAEVLGLNQVGIDDNFFDLGGHSLLATRLISRIRSTFSREVAIRTLFEAPTVAQLDRYLNKSDTARTALQKQMRPPRLPLSPAQRRLWLLDRIDGHSSTYNIPIALHLNGDIEISVLKSCLKDILLRHESLATTFVEVEGIPHQEVVSADNLNIDIITKKIAHENLSTALVAAANYNFDLSIDVPIRPYLFQLGQNEYVLLILLHHIAADGWSMFPLLRDLSASYNARSKGKEPEWTPLSVQYADYTLWHQDVLGSESDQDSLISKQIEYWREALKGLPDEINLPVDRTRPAIESHRGAEVEFALSGELHAGLKALARNERVTLFMLFHSTLAALLYRLGAGTDIAIGSPVAGRMDAALEDLVGFFVNTLVFRIDTADNPTFRELCGRVRDITLDAYAHQDLPFERLVELLNPSRSLAKHPLFQVLLVLHNNLEANLAFDGVDASIEKVNVTSAKFDLSFALREQFDADKAPAGIFGAIEYATDLFDRDTVEAFADRFIRLLEAIVSDPEQRLDEIDLLDPDERHKVLVEWNDTRRPISEALLPELFQAQVARTPDAIAVVDRDHVLTYRDLETQANRLAHYLVNLGVGPDRPVVICIERCIDVAVGLLAILKAGGAYVAVDPVYPKDRIDFVARDARPAVVITMSRHAELFVGLHPSVPVISIDADHNEWSTMSGAPPEMGGNDSRLAYICYTSGSTGTPKGVMIDHAAVVRTVMATDYANFGVRETFLQFAPLAFDASTFEIWGALLNGGRLVFAPPGKVGLDEVCDLVQKFNVTTLWLTAGIFQLLSEEHLQCLFSLRQLLAGGDVLSLDTINRVNKALPNCQVINGYGPTEATTFSVCHAFPKGIATEIPIGKPIANTKVYVLDKCLAPVPIGVVGELYIAGRGVGRGYLNHPSLTCEKFISSPFGDSGDRLYRTGDLVRWGRDGLLRFLGRADEQVKIRGFRIEPGEIEATLLSHPSVSQAVVIAREDSSGDKKLLGYVVSQSGSLIDAQALRQFLRDRLPDYMVPAAIIALDRLPLSPNGK…
SIO_010081: AVI_RS23385
subclass of: SO_0000673
so part of: AVI_RS23385
location: 108053..115738
location: region:108053-115738:1
so has part: feature:108053-115738:1:exon

WP_012655107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108053-115738:1:exon

AVI_RS23390
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23390
old locus tag: Avi_9644
so part of: sequence
location: 115845..116480
location: region:115845-116480:1
so has part: feature:115845-116480:1:exon
subclass of: SO_0000010

position:115845:1
position: 115845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116480:1
position: 116480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115845-116480:1:exon

AVI_RS23390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23390
old locus tag: Avi_9644
inference: COORDINATES: protein motif:HMM:NF013786.2
GO function: GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4'-phosphopantetheinyl transferase superfamily protein
translation: MWRYLSADEKERARKYRYESHRDTFVMGRGLLRTLLSERLKVPEQEIRFVYGPFGKPHLLDYNNNERIHFNVSNAEDVVAIAMSSTTRVGIDVERKKNESYEEIYPFVLSDRELHEVRGADPQLRGAAFISCWTRKEALVKAAGLSISSLATIELSNEQNRIQLCAADWDGTKHLRKFSAWDESLIAGFSVSIACDSARATVKSHRHCFKT
SIO_010081: AVI_RS23390
subclass of: SO_0000673
so part of: AVI_RS23390
location: 115845..116480
location: region:115845-116480:1
so has part: feature:115845-116480:1:exon

WP_041699209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115845-116480:1:exon

AVI_RS23395
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23395
old locus tag: Avi_9645
so part of: sequence
location: 116565..117056
location: region:116565-117056:1
so has part: feature:116565-117056:1:exon
subclass of: SO_0000010

position:116565:1
position: 116565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117056:1
position: 117056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116565-117056:1:exon

AVI_RS23395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23395
old locus tag: Avi_9645
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004125932.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MDKEIDSLKTGRGLVRSLDPEIEKPHYRMAISANGGQVPSMGEMERKLSAFLRKMREQAGLTRAEFAPLLGLSVPVYSRYERAFSKIHVTRLLHVCELLGLSPVEMLYEAAPHLWGSTDEEAEDRFRLVALVLKLPHRTTRDLMRMVEHLGQMENGRVATKPY
SIO_010081: AVI_RS23395
subclass of: SO_0000673
so part of: AVI_RS23395
location: 116565..117056
location: region:116565-117056:1
so has part: feature:116565-117056:1:exon

WP_012655109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116565-117056:1:exon

AVI_RS23400
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23400
old locus tag: Avi_9646
so part of: sequence
location: complement(117454..118068)
location: region:117454-118068:-1
so has part: feature:117454-118068:-1:exon
subclass of: SO_0000010

position:117454:-1
position: 117454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118068:-1
position: 118068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117454-118068:-1:exon

AVI_RS23400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23400
old locus tag: Avi_9646
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPILSRKGLQLPVIIGVAALLSGCVLPERLDATIVMTGYRYHAVLEGRVAEPRTVGALAKGQAIPPNHEAQMKAQEAPALALPGMTRFAYVSQGRYDVAMKVDGELTEAAPVVGFPNTRGGSHNFLTIRREADGTIVISSPEVPVNALADLNAVGLQASGKISIEFDGKVLGSNADDQTRRGLHVWNRKDWEDRVLLKLDPDGR
SIO_010081: AVI_RS23400
subclass of: SO_0000673
so part of: AVI_RS23400
location: complement(117454..118068)
location: region:117454-118068:-1
so has part: feature:117454-118068:-1:exon

WP_012655110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117454-118068:-1:exon

AVI_RS23405
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: trbI
locus tag: AVI_RS23405
old locus tag: Avi_9647
so part of: sequence
location: complement(118069..119406)
location: region:118069-119406:-1
so has part: feature:118069-119406:-1:exon
subclass of: SO_0000010

position:118069:-1
position: 118069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119406:-1
position: 119406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118069-119406:-1:exon

AVI_RS23405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: trbI
locus tag: AVI_RS23405
old locus tag: Avi_9647
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010974832.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IncP-type conjugal transfer protein TrbI
translation: MSSIDLGSAEEDDERPKIRRLNRLPIFFFIALIVILVVVVIWGMAQRGLIGNRGAQPEQSVGQPASDFADELKRNIGDGVNEPQRQDPLIITPGETPMELPEGVNPFQPGSRQRPTTQQAETPLEPEADWRERLKREHEEALLREQNRQRLAAMQAQANARNSPMAVDIGKVTQQQGIGQQGQGQANGLTSPNGTADLLSAAMRAAGAGPGGMADPNNQQGKISFLNKDIADAGYLPNQIVPQQSPFELKRGSVIPATLITGINSDLPGRITAQVRQHVYDSATGHRLLIPQGTKLFGRYDSEVSYGQSRALVVWTDIIFPNGSTLQIGGMAGVDTQGYGGFKDKVKNHFWRVWGSAILVAAIGTGVDMALPESNSNAFGVTQNDPTDAARRNFAETFGRVADRTIDKNMNIQPTLEIRPGYQFNILVDQDIVLPGAYQTGYVER
SIO_010081: AVI_RS23405
subclass of: SO_0000673
so part of: AVI_RS23405
location: complement(118069..119406)
location: region:118069-119406:-1
so has part: feature:118069-119406:-1:exon

WP_012655111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118069-119406:-1:exon

AVI_RS23410
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: trbH
locus tag: AVI_RS23410
old locus tag: Avi_9648
so part of: sequence
location: complement(119420..119875)
location: region:119420-119875:-1
so has part: feature:119420-119875:-1:exon
subclass of: SO_0000010

position:119420:-1
position: 119420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119875:-1
position: 119875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119420-119875:-1:exon

AVI_RS23410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: trbH
locus tag: AVI_RS23410
old locus tag: Avi_9648
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006473165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbH
translation: MQGNSTLVRVLAIGIVSASLAACTTSGGYFSPQTSMDAANLQAPAADAVAADMVARLAEHVGPGTGTIVLKTDNTAFASAFEKHLREWGYAVDATATGPKAIALAYTVDSLDGDVIARVSTPGVELARQYQATKTGAVASSPLSVMKHGET
SIO_010081: AVI_RS23410
subclass of: SO_0000673
so part of: AVI_RS23410
location: complement(119420..119875)
location: region:119420-119875:-1
so has part: feature:119420-119875:-1:exon

WP_012655112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119420-119875:-1:exon

AVI_RS23415
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: trbG
locus tag: AVI_RS23415
old locus tag: Avi_9650
so part of: sequence
location: complement(119879..120700)
location: region:119879-120700:-1
so has part: feature:119879-120700:-1:exon
subclass of: SO_0000010

position:119879:-1
position: 119879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120700:-1
position: 120700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119879-120700:-1:exon

AVI_RS23415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: trbG
locus tag: AVI_RS23415
old locus tag: Avi_9650
inference: COORDINATES: protein motif:HMM:NF010413.0
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MFKLTKLRASVVTALVLLTAAPTLGGAADYNASKGTRLSGQWQDAGAVMTRGPDGQVIYLFGETQPTVVCAPLQLCEVQLQPGEAVRDVLVGDTVRWQVEPASSGSPQGQRISLIVKPAEAGLKTSMVITTSRRTYHINLQSDGTRYMARVAFKYPEDVRQQLAAVNQKISDSIIPGAGIPAENLRFDFSMRGSARWKPTRIYTDGTKTYIQFPGQMRSGDAPVLYVVSGGQNQIVNYRLNNNMMVVDYLIDRAVLISGVGRQQQKITISRRG
SIO_010081: AVI_RS23415
subclass of: SO_0000673
so part of: AVI_RS23415
location: complement(119879..120700)
location: region:119879-120700:-1
so has part: feature:119879-120700:-1:exon

WP_012655113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119879-120700:-1:exon

AVI_RS23420
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: trbF
locus tag: AVI_RS23420
old locus tag: Avi_9651
so part of: sequence
location: complement(120719..121384)
location: region:120719-121384:-1
so has part: feature:120719-121384:-1:exon
subclass of: SO_0000010

position:120719:-1
position: 120719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121384:-1
position: 121384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120719-121384:-1:exon

AVI_RS23420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: trbF
locus tag: AVI_RS23420
old locus tag: Avi_9651
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018482029.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbF
translation: MAKKLKHFDNPYLAARHEWNERMGGANRAARAWMTVGSVSLVMATVGFGFALYQASQVKLVPYIVQVDTLGNSVTGGFPAQIEYADERVVRNMLGQFVYNFRSITPDNVVQKGYIDRTYAMLRRTDPSTEKVNNWFRNNSPFDRARTVTVSVEINNIVALSNQSYQIDWTEIERDRAGKELRTRRWRGIATVTLSPPQDEAIIRLNPIGLYLKDFDWTAQL
SIO_010081: AVI_RS23420
subclass of: SO_0000673
so part of: AVI_RS23420
location: complement(120719..121384)
location: region:120719-121384:-1
so has part: feature:120719-121384:-1:exon

WP_012655114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120719-121384:-1:exon

AVI_RS23425
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: trbL
locus tag: AVI_RS23425
old locus tag: Avi_9653
so part of: sequence
location: complement(121425..122531)
location: region:121425-122531:-1
so has part: feature:121425-122531:-1:exon
subclass of: SO_0000010

position:121425:-1
position: 121425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122531:-1
position: 122531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121425-122531:-1:exon

AVI_RS23425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: trbL
locus tag: AVI_RS23425
old locus tag: Avi_9653
inference: COORDINATES: protein motif:HMM:NF010415.0
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MRAALVLRLAPFAIVALAAVEPALAADGSILTNLENNVRSATQGWQDTVMNAARSLFWILAGIEFGIAAVWFAIAAPSLDTWVAELIRRIIFIGFFLFVLQQGPDFAKAVVDSLFQLGANGGTASPADVFNAGIKVASTLSEKVKFGIFEDNAMAIGIIIAMIVVVISFSLVAAIFVSVLVEMYVGLLAGMIMLGLGGSSFTKDFAIKYLVYAFSVGMKLMALVMIARIGSEILIGLSNDANTGEELLASLVIAGLSVVIFMIAIYVPNIIQGVVQGVSVSSGMEAMRSSAQVTAFAASTVAGVGAGVAAAGTAKAAGAGILGQASAGVRAGGSALAGTAAKAAMGSHGSGAGGPSRSMGLRNHKTSK
SIO_010081: AVI_RS23425
subclass of: SO_0000673
so part of: AVI_RS23425
location: complement(121425..122531)
location: region:121425-122531:-1
so has part: feature:121425-122531:-1:exon

WP_012655115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121425-122531:-1:exon

AVI_RS23430
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23430
so part of: sequence
location: complement(122548..122799)
location: region:122548-122799:-1
so has part: feature:122548-122799:-1:exon
subclass of: SO_0000010

position:122548:-1
position: 122548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122799:-1
position: 122799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122548-122799:-1:exon

AVI_RS23430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23430
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF2749 domain-containing protein
translation: MAQVKLPIVILVALFSAVAGGAISYVAIPTADPEMKALLSRQVALAEEEAAARAAAAERTRKLMNSNPDDYPTTGGQKMAPRW
SIO_010081: AVI_RS23430
subclass of: SO_0000673
so part of: AVI_RS23430
location: complement(122548..122799)
location: region:122548-122799:-1
so has part: feature:122548-122799:-1:exon

WP_041699212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122548-122799:-1:exon

AVI_RS23435
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: trbJ
locus tag: AVI_RS23435
old locus tag: Avi_9655
so part of: sequence
location: complement(122804..123592)
location: region:122804-123592:-1
so has part: feature:122804-123592:-1:exon
subclass of: SO_0000010

position:122804:-1
position: 122804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123592:-1
position: 123592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122804-123592:-1:exon

AVI_RS23435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: trbJ
locus tag: AVI_RS23435
old locus tag: Avi_9655
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011505220.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MLRRSLLRNALAGLVLAVSPSVVFAGAATGGATEWTQLLNNAQLLEQSGQGVEQIANQTQQIAHQVTQIQNQLDQYRTMLQNLEKLPDTIWGQAQKDLNRLRQLTQQGEGIGFSMANLDDVLKQRFPSFEQFASGVQGGQNFSQQYGQWSKTNRDTIGGTLAQAGMTAQQFDTEQSTMKQLQEQSQTSVGQMQALQVGHSIASQQVEQMQKLRGLIAQQSTMMGTWYQSEQTAKDLAQHKRESFFSSTPPSTSGGQKMQPRW
SIO_010081: AVI_RS23435
subclass of: SO_0000673
so part of: AVI_RS23435
location: complement(122804..123592)
location: region:122804-123592:-1
so has part: feature:122804-123592:-1:exon

WP_012655116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122804-123592:-1:exon

AVI_RS23440
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23440
old locus tag: Avi_9656
so part of: sequence
location: complement(123567..126005)
location: region:123567-126005:-1
so has part: feature:123567-126005:-1:exon
subclass of: SO_0000010

position:123567:-1
position: 123567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126005:-1
position: 126005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123567-126005:-1:exon

AVI_RS23440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23440
old locus tag: Avi_9656
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013913818.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbE
translation: MVSLKKFRHTGASFSDLVPYAGLVDNGIMLLKDGSLMAGWYFAGPDSESSTDFERNEVSRAINSVLARLGTGWMIQVEAVRVPTTEYPSKDRSHFPDRVSQLIDDERRQRFETTEGHFESQHAVILTYREPDTRKSGLVKYVYADPASRATSNADRILEHFKTSIREFEQYMQNVVSIRRMVTQEVPDRGGYRVARYDELFQFVRFCLVGENHPVRLPEIPMYLDYMATAEFHHGLSPMVDGRFCQIVAIDGFPAESWPGILNVLDLMPLTYRWSSRFMFMDEIEATQRLERTRKKWIQKVRPFTDQLFKTNSGSVNQDALLMVGEAEDAIAAANSRLVAYGYYTPVIVMFGEDDAKLRRQAESVRRLIQSEGFGARIESLNATEAFLGSLPGNWYANIREPLIHTRNLADMIPLNSVWSGEPVNPNPFYPENSPPLMLVASGSTPFRLNLHVGDLGHTLIFGPTGSGKSTLLALIAAQFRRYQNSQLFAFDKGRSMYPLTRAVGGDFYDVGASENLAFCPLQDLDTDADKAWAAEWLETLIIMSGETVTPDHRNAIAHQLDLMSKSERRSISDFVSGVQKKSIKEALRHYTVDGPMGHLLDAEQDNLKLSNFQTFEVDELMNMGERNLVPVLLYLFRRIEKRLTGAPSLIILDEAWIMLGHPAFRDKIREWLKTLRRANCAVVLATQSISDADKSGIMDVLKESCPTKICLPNGAARETGTRDFYEKIGFNDRQIEIIATATPKREYYVVSPDGRRLFEMGLGPITLSFVGVSGKHDLQRISELYDHHGDEWPRHWLQSRGIENAASLFAS
SIO_010081: AVI_RS23440
subclass of: SO_0000673
so part of: AVI_RS23440
location: complement(123567..126005)
location: region:123567-126005:-1
so has part: feature:123567-126005:-1:exon

WP_041699214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123567-126005:-1:exon

AVI_RS23445
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23445
old locus tag: Avi_9658
so part of: sequence
location: complement(126009..126308)
location: region:126009-126308:-1
so has part: feature:126009-126308:-1:exon
subclass of: SO_0000010

position:126009:-1
position: 126009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126308:-1
position: 126308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126009-126308:-1:exon

AVI_RS23445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23445
old locus tag: Avi_9658
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013984785.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbD
translation: MAEGTSRLDRVRIHRALSRPALLFGADRELVLMTGLTAVILIFVVLTLVSAAVGFIIWIVVVGLLRMMAKADPLMRQVYLRHMKYRSHYRPTSSPWRKH
SIO_010081: AVI_RS23445
subclass of: SO_0000673
so part of: AVI_RS23445
location: complement(126009..126308)
location: region:126009-126308:-1
so has part: feature:126009-126308:-1:exon

WP_012655118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126009-126308:-1:exon

AVI_RS23450
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23450
old locus tag: Avi_9659
so part of: sequence
location: complement(126301..126666)
location: region:126301-126666:-1
so has part: feature:126301-126666:-1:exon
subclass of: SO_0000010

position:126301:-1
position: 126301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126666:-1
position: 126666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126301-126666:-1:exon

AVI_RS23450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23450
old locus tag: Avi_9659
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006473157.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MSRRMFTLVALAAISMMMAEPAFAAGGGGGLPWEGPLQQIQQSITGPVAMAIALIAVAVAGGMLIFGGEINDFARRLAYVVLVCGILLGATQVVGLFGGGGASIGVPLEATQDVTLDRAHG
SIO_010081: AVI_RS23450
subclass of: SO_0000673
so part of: AVI_RS23450
location: complement(126301..126666)
location: region:126301-126666:-1
so has part: feature:126301-126666:-1:exon

WP_012655119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126301-126666:-1:exon

AVI_RS23455
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: trbB
locus tag: AVI_RS23455
old locus tag: Avi_9661
so part of: sequence
location: complement(126684..127610)
location: region:126684-127610:-1
so has part: feature:126684-127610:-1:exon
subclass of: SO_0000010

position:126684:-1
position: 126684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127610:-1
position: 127610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126684-127610:-1:exon

AVI_RS23455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: trbB
locus tag: AVI_RS23455
old locus tag: Avi_9661
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007767702.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MIANLRDALGDVIVAALNDLAVVEVMLNPDGKLFVERIGEGIRPAGDMNAHDAEAVIGRVAHALSTEINRERPIISGELPLGGHRFEGLLPPAAPAPMFTIRKRASVLISLDRYVEDGILTTAQVAVIRDAIVQRLNIVVSGGTGTGKTTLTNAILREFVDVTPEHRLVILEDTAEIQCAAKNYVILHTTDTVDMNRLLKSTMRLRPDRIIVGEVRDGAALTLLKAWNTGHPGGIATVHANNAKAALTRLEQLVAEVSSQPMPEVIGEAVDLIVSIERTPKGRIVREILRVDGFRNGTYQITPVGNQL
SIO_010081: AVI_RS23455
subclass of: SO_0000673
so part of: AVI_RS23455
location: complement(126684..127610)
location: region:126684-127610:-1
so has part: feature:126684-127610:-1:exon

WP_244427794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126684-127610:-1:exon

AVI_RS23465
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23465
old locus tag: Avi_9665
so part of: sequence
location: 128401..129123
location: region:128401-129123:1
so has part: feature:128401-129123:1:exon
subclass of: SO_0000010

position:128401:1
position: 128401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129123:1
position: 129123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128401-129123:1:exon

AVI_RS23465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23465
old locus tag: Avi_9665
inference: COORDINATES: protein motif:HMM:NF015437.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autoinducer binding domain-containing protein
translation: MKNHDIYEFMERCDNQKSVDNLFSDFGTVIAKRGFHSYIYTGLPAVGDDVKHYVVKNAWPPGWTEQFEGLNYFADDPVSRWSLSQSKPFTWKTAREETKATARTKEIQQEADRYRLCDGIVFPMFDPNSWQSVISLATDDKGGLAKENIGDLYLLSSYCAMTANNLLRRAEQADHRLTDREKEILQWVSRGKTDWEIGTILRMTEGSVTQRLARIRDTLGVKNRPQTVSQAIRLGLINSV
SIO_010081: AVI_RS23465
subclass of: SO_0000673
so part of: AVI_RS23465
location: 128401..129123
location: region:128401-129123:1
so has part: feature:128401-129123:1:exon

WP_012655121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128401-129123:1:exon

AVI_RS23470
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23470
old locus tag: Avi_9666
so part of: sequence
location: 129203..129871
location: region:129203-129871:1
so has part: feature:129203-129871:1:exon
subclass of: SO_0000010

position:129203:1
position: 129203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129871:1
position: 129871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129203-129871:1:exon

AVI_RS23470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23470
old locus tag: Avi_9666
inference: COORDINATES: protein motif:HMM:NF012967.2
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-homoserine-lactone synthase
translation: MLVHVITSSNSALYPTELDELFRIRHKIYVEEKGWRETSPDGMERDQFDTEHAVHLVGIEDGRIIAGSRFVPTTQPHLLSEVFPHLCTRPGVLRHERVAEWTRGFIIPEFREKAGLLIKAQFCTAVMEYCLNQGIEQIGGIQEIYWLPLWKRFGWRVKVIGDAAEIDSVLCVPAYFEVSVEALEGVRRRANLSSSNLIEQGRLEPFVPAQAPAFDVSVFSAV
SIO_010081: AVI_RS23470
subclass of: SO_0000673
so part of: AVI_RS23470
location: 129203..129871
location: region:129203-129871:1
so has part: feature:129203-129871:1:exon

WP_012655122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129203-129871:1:exon

AVI_RS23475
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS23475
so part of: sequence
location: 129948..130385
location: region:129948-130385:1
so has part: feature:129948-130385:1:exon
subclass of: SO_0000010

position:129948:1
position: 129948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130385:1
position: 130385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129948-130385:1:exon

AVI_RS23475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS23475
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDTAVKRTDACAMSELQKAFDLILYGREKTDTPGKSLKCIGLFTVILRLRAFDETVTRQVLARETGLTENAIAPHVRYLESLGLVKMTLARARNSIAREFHIDAEDALIGYTRRAIAKGSRRAYAGHESLSEGYMKRTPHEDQGR
SIO_010081: AVI_RS23475
subclass of: SO_0000673
so part of: AVI_RS23475
location: 129948..130385
location: region:129948-130385:1
so has part: feature:129948-130385:1:exon

WP_041699219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129948-130385:1:exon