Allorhizobium ampelinum S4 plasmid pTiS4, complete sequence.
type: Entry
definition: Allorhizobium ampelinum S4 plasmid pTiS4, complete sequence.
sequence version: NC_011982.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NC_011982.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02602976
keyword: RefSeq
source: Allorhizobium ampelinum S4
organism: Allorhizobium ampelinum S4
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Allorhizobium; Allorhizobium ampelinum.
reference: 1
references: 19251847
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP000637.1.\nStrain/DNA available from Tom Burr, Cornell University,\ntjb1@cornell.edu. A. vitis S4 was isolated by Dr. Erno Szegedi in\n1981 from aerial gall that developed on a two-year-old woody\ngrapevine cane.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 19:47:51\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,800\nCDSs (total) :: 5,729\nGenes (coding) :: 5,554\nCDSs (with protein) :: 5,554\nGenes (RNA) :: 71\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 4\nPseudo Genes (total) :: 175\nCDSs (without protein) :: 175\nPseudo Genes (ambiguous residues) :: 0 of 175\nPseudo Genes (frameshifted) :: 82 of 175\nPseudo Genes (incomplete) :: 122 of 175\nPseudo Genes (internal stop) :: 28 of 175\nPseudo Genes (multiple problems) :: 52 of 175\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 258824
topology: circular
so has quality: SO_0000988
location: 1..258824
location: region:1-258824:1
RO_0002162: 311402

NC_011982
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02602976
type: BioSample
SIO_000068: biosample

1
title: Genome sequences of three agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria
author: Slater, S.C.
author: Goldman, B.S.
author: Goodner, B.
author: Setubal, J.C.
author: Farrand, S.K.
author: Nester, E.W.
author: Burr, T.J.
author: Banta, L.
author: Dickerman, A.W.
author: Paulsen, I.
author: Otten, L.
author: Suen, G.
author: Welch, R.
author: Almeida, N.F.
author: Arnold, F.
author: Burton, O.T.
author: Du, Z.
author: Ewing, A.
author: Godsy, E.
author: Heisel, S.
author: Houmiel, K.L.
author: Jhaveri, J.
author: Lu, J.
author: Miller, N.M.
author: Norton, S.
author: Chen, Q.
author: Phoolcharoen, W.
author: Ohlin, V.
author: Ondrusek, D.
author: Pride, N.
author: Stricklin, S.L.
author: Sun, J.
author: Wheeler, C.
author: Wilson, L.
author: Zhu, H.
author: Wood, D.W.
journal: J Bacteriol
volume: 191
issue: 8
pages: 2501-2511
year: 2009
pubmed: 19251847

19251847
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Setubal, J.
author: Wood, D.
author: Slater, S.
author: Nester, E.
author: Farrand, S.
author: Goldman, B.
author: Burr, T.
author: Goodner, B.
author: Otten, L.
author: Dickerman, A.
author: Almeida, N.
author: Sun, J.
author: Jhaveri, J.
author: Banta, L.
author: Houmiel, K.
journal: Submitted (14-MAR-2007) Virginia Bioinformatics Institute, Virginia Tech, Washington Street, Box 0477, Blacksburg, VA 24061, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258824:1
position: 258824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-258824:1:source
so part of: sequence
organism: Allorhizobium ampelinum S4
mol type: genomic DNA
strain: S4
isolate: Kecskemet-Hungary; ATCC BAA-846
host: Vitis vinifera cv. 'Izsaki Sarfeher'
culture collection: ATCC:BAA-846
type material: type strain of Allorhizobium ampelinum
plasmid: pTiS4
country: Hungary: Orgovany

311402
type: Taxonomy
SIO_000068: taxonomy

AVI_RS24455
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: repA
locus tag: AVI_RS24455
old locus tag: Avi_8000
so part of: sequence
location: 61..1251
location: region:61-1251:1
so has part: feature:61-1251:1:exon
subclass of: SO_0000010

position:61:1
position: 61
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251:1
position: 1251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61-1251:1:exon

AVI_RS24455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: repA
locus tag: AVI_RS24455
old locus tag: Avi_8000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018009855.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepA
translation: MSHLQPNRFDIEIAQQGAKISNALHMLRSQQYPPDAKKGLRKFQLGEVADFIGVTQSHIRQIHLEGKGPEVESIGGRRYYTADQMLELRNYLEANKKSDKRYYIPRRREGEPMQVVSVVNFKGGSGKTTTAAHLAQYLALTGHRVLAVDLDPQASLTSLFGIQPELDDTASLYEALRFDDEQKFISEVIQPTNIPCLDVIPANLVLQEYEYDVPLAISSKKGEDGRLFYMRIFNALKQVDDRYDVVVIDCPPQLGYLTITALMASTGILITIHPQMLDIMSMSQFLMMLGGIMGPVAEAGAEMRVEWFRYLVTRFEPTDIPQAQMVGFMQSMFAQQMLRNHVLKSTAISDASIKKQTLYEVERGDFVRSTYDRAMESLNAANGEIMELIHGAWGRK
SIO_010081: AVI_RS24455
subclass of: SO_0000673
so part of: AVI_RS24455
location: 61..1251
location: region:61-1251:1
so has part: feature:61-1251:1:exon

WP_041699443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61-1251:1:exon

AVI_RS24460
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: repB
locus tag: AVI_RS24460
old locus tag: Avi_8001
so part of: sequence
location: 1336..2331
location: region:1336-2331:1
so has part: feature:1336-2331:1:exon
subclass of: SO_0000010

position:1336:1
position: 1336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2331:1
position: 2331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1336-2331:1:exon

AVI_RS24460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: repB
locus tag: AVI_RS24460
old locus tag: Avi_8001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006312309.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepB
translation: MARENPFSKLDMASIASNQTPTKPGYGMTGAAKTVVRSIEDLAENTKKLMEGEVIVDLDPRLIDVSFLADRLSDDGEEYQELKQAIASSSQTTPILVRPSSSDSQRFMVVFGHRRLKVAKELGIPVKAVVKKLDDITSAIAQGQENSARSNLSFIERAYFAQNLLSSGMTKDVVRSSLAIDEAMLSKMLSVVEAVPASILKVLGASKKIGRDRWLSLRQLLLAPALLKVATEHVETAGFVELTEDKRFDELHDYLKRYKAKSAAKKPKAGASGRDWTSSDTSLNFVMNAKSKKVAIELSNVEAKPFSEWLSAHMDRLYDEYRGSKQENNGD
SIO_010081: AVI_RS24460
subclass of: SO_0000673
so part of: AVI_RS24460
location: 1336..2331
location: region:1336-2331:1
so has part: feature:1336-2331:1:exon

WP_012648910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1336-2331:1:exon

AVI_RS24465
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: repC
locus tag: AVI_RS24465
old locus tag: Avi_8002
so part of: sequence
location: 2487..3731
location: region:2487-3731:1
so has part: feature:2487-3731:1:exon
subclass of: SO_0000010

position:2487:1
position: 2487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3731:1
position: 3731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2487-3731:1:exon

AVI_RS24465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: repC
locus tag: AVI_RS24465
old locus tag: Avi_8002
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018516709.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: MQTGHVTTPFGRRPATLALVKGQLAVAASTPGTRVEKWKVFRDVCETRERFGLQDRALAVLDALLTFYPDAQLDAENGLVVFPSNAQLSVRAHGITESTLRRQLGALVDAGLIQRRDSPNGKRYAHRSRDGEIEQAYGFDLSPLLTRAAELALLAQDVAAERMRFRRAKEALTICRRDVRKLITAAMEEGAPGNWAHVETIYVGILRRHPRYPDRNQVETTLDEMELLRAEILNLLEMQSETKDMHGNASLDDRHIQNSNTESINELEPRSDNEQGESVPDEPHAKSVTSGKTKAKLEQIKAFPLGMVLRACPQIADYGPGGGIAHWRELMTAAVVIRSMLGVSPSAYEEACNAMGPENAAVAMACILERSNFINSAGGYLRDLTKRSERGEFSLGPMLIALLKVNGETARRVG
SIO_010081: AVI_RS24465
subclass of: SO_0000673
so part of: AVI_RS24465
location: 2487..3731
location: region:2487-3731:1
so has part: feature:2487-3731:1:exon

WP_012648911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2487-3731:1:exon

AVI_RS24470
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24470
old locus tag: Avi_8003
so part of: sequence
location: 3966..5258
location: region:3966-5258:1
so has part: feature:3966-5258:1:exon
subclass of: SO_0000010

position:3966:1
position: 3966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5258:1
position: 5258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3966-5258:1:exon

AVI_RS24470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24470
old locus tag: Avi_8003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501695.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWKAKRKLLNVEQVSPHPAGPSRLIRGRAPGSTELSFTPAELFGAMAQCSSRARMDQRAARAQVAFCKHLIAQHVDDANDRFALLNSARDLKDYVRKAMTGLVGDGIAYLQMVRDGYRWVDHFESHVVHGKKPTGRSPDFIFSRTNDLYVALAESKATKGTSKGAFNERVADGYKGQIEPYLGRKIGSWIASHGYSVGTWMTSLKRAEMFVHHTALPDPVDPDGLDPEEASDPTGVRFGSYCGVITLLFGPEIGEAARSRLWNPSEQTFSTVEWLGRTWILGEEVDAEAIVTGRHGKVVFKGTWSHWFNGLAIDLETARRVFAYIEAEEPEGRMLENIPEFGADLIEAAKESGGAIFPDGFAVLGRENDLKEVQLDAIPPKAAASTVVKDDDIEIAEAIVERLSYREAENEETQEEELERPQALIFVTRE
SIO_010081: AVI_RS24470
subclass of: SO_0000673
so part of: AVI_RS24470
location: 3966..5258
location: region:3966-5258:1
so has part: feature:3966-5258:1:exon

WP_012648912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3966-5258:1:exon

AVI_RS24475
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24475
old locus tag: Avi_8004
so part of: sequence
location: complement(5296..6183)
location: region:5296-6183:-1
so has part: feature:5296-6183:-1:exon
subclass of: SO_0000010

position:5296:-1
position: 5296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6183:-1
position: 6183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5296-6183:-1:exon

AVI_RS24475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24475
old locus tag: Avi_8004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501693.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGFDDEYGFREVEFSLHEAQAERLFIRGKNAANDQYFDNQARENHIYSVNNALNQLLGDAAVLVELGVLTQTADYFMRFGVLRRLRMMISSFRNLQSIIMPDRTVPLTMDQSDEVCRDLNAIYVNILGLLDNYAWTIVHQVGSVATQAAKPLSVSLFKPMFAADPALSNVAATLRSFATWETDVKKRRNPAAHRMPLYVPPAGYDREATETLRDLDQQISTALREQDFDKMHNLQRKRERVGIFVPIFVHDPGEEINDIYPTLPQDLGQMVKIGRISQTFLRKQHAPNDASHEGN
SIO_010081: AVI_RS24475
subclass of: SO_0000673
so part of: AVI_RS24475
location: complement(5296..6183)
location: region:5296-6183:-1
so has part: feature:5296-6183:-1:exon

WP_012648913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5296-6183:-1:exon

AVI_RS24480
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24480
old locus tag: Avi_8005
so part of: sequence
location: 6341..7270
location: region:6341-7270:1
so has part: feature:6341-7270:1:exon
subclass of: SO_0000010

position:6341:1
position: 6341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7270:1
position: 7270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6341-7270:1:exon

AVI_RS24480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24480
old locus tag: Avi_8005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFITNALSPAETLAEILQKNSSIIADTDWFKTKKHDADLCPMFESLGVEILQSYKAYRAGCHDIQGMRDDGVDILLKYDSEDGATKIGLQIKSYPEFQDWVAKEDKTFMKTLKSQYTEAMQNVGVEHYFLILCTDAHEHRKQIRMISAELKNFANLTIVKPVQVRGFTLLSHWELQATVTRLLCQDDPVLNAARECFSDLATLDDYMTLDLLCRAFGGANEPIDNGDLEDIAEQWTELAGGARDMDEVADALGFMESSGYLRYVGERYVIVPEEFPNALCAIYFDLRARNGLAADDALAYLVPLLLNIP
SIO_010081: AVI_RS24480
subclass of: SO_0000673
so part of: AVI_RS24480
location: 6341..7270
location: region:6341-7270:1
so has part: feature:6341-7270:1:exon

WP_012648914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6341-7270:1:exon

AVI_RS24485
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24485
old locus tag: Avi_8006
so part of: sequence
location: complement(7357..8493)
location: region:7357-8493:-1
so has part: feature:7357-8493:-1:exon
subclass of: SO_0000010

position:7357:-1
position: 7357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8493:-1
position: 8493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7357-8493:-1:exon

AVI_RS24485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24485
old locus tag: Avi_8006
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501256.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MAQIIKQNSENHVEETSAPSHSTVAERDVSASEVSGDSPLPSLVGEDQTPAHLASLADRARGYVAAASSANTRKAYASDWKHFAAWCRRSNLAPLPPHPQTVGLYITACASGHVERSGKPNSVSTIERRLSSLSWNYAQRGGQKLDRRDRHIATVMAGIRNSHARPPVQKEAVMAEDIIAMVETLDRGSLRGLRDRAMLLIGFAGGLRRSEIVDLDLKPDQTEDGRGWIEILDKGMLVTLRGKTGWREVEIGRGSSDATCPVTAVEMWIKFAKLAHGPLFRRVTGQGKAVGPERLNDKEVARLVKRAAMAAGVRGDLSEIERAFKFSGHSLRAGLASSAEVDERYVQKQLGHSSAEMTRRYQRRRDRFRVNLTKASGL
SIO_010081: AVI_RS24485
subclass of: SO_0000673
so part of: AVI_RS24485
location: complement(7357..8493)
location: region:7357-8493:-1
so has part: feature:7357-8493:-1:exon

WP_012648915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7357-8493:-1:exon

AVI_RS24490
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24490
pseudo: true
so part of: sequence
location: 8618..9551
location: region:8618-9551:1
so has part: feature:8618-9551:1:exon
subclass of: SO_0000010

position:8618:1
position: 8618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9551:1
position: 9551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8618-9551:1:exon

AVI_RS24490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007538502.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF1403 family protein
SIO_010081: AVI_RS24490
subclass of: SO_0000673
so part of: AVI_RS24490
location: 8618..9551
location: region:8618-9551:1
so has part: feature:8618-9551:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8618-9551:1:exon

AVI_RS24495
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24495
old locus tag: Avi_8008
so part of: sequence
location: 9562..10257
location: region:9562-10257:1
so has part: feature:9562-10257:1:exon
subclass of: SO_0000010

position:9562:1
position: 9562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10257:1
position: 10257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9562-10257:1:exon

AVI_RS24495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24495
old locus tag: Avi_8008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018325683.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMC-Scp complex subunit ScpB
translation: MSSRQPHRIAKKNQKNPQDDVLFDRELKDLPTELRWREWMMEVEAVIFASAEPVPRETLARVVGKDCSIDLLIDDSSEELRDRPYELVSVAGGWQHRTRSRFAGAIRASTAPTRGGAAALSEFEAMVLMAVGYFQPVTRTELSKIFGKEVSRDVIAALRGAGFLASGPRSPTPGAPYTYVTTKHFFSAFGLETLRDLPDIEALEDAGLFSRKGELQIMDSAHGEEGEMEDG
SIO_010081: AVI_RS24495
subclass of: SO_0000673
so part of: AVI_RS24495
location: 9562..10257
location: region:9562-10257:1
so has part: feature:9562-10257:1:exon

WP_012648916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9562-10257:1:exon

AVI_RS24500
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24500
old locus tag: Avi_8010
so part of: sequence
location: complement(10347..10769)
location: region:10347-10769:-1
so has part: feature:10347-10769:-1:exon
subclass of: SO_0000010

position:10347:-1
position: 10347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10769:-1
position: 10769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10347-10769:-1:exon

AVI_RS24500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24500
old locus tag: Avi_8010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQANHTNLQNMYANKADGQPSIDSPHPIDQRCPMSQTSDFIAKLVRGANQLDRLDAYQKRRLLERAVTTIREMRAAIGMPNGPGRDVVLDLHTTALSIEQGWRTDDQVRNAFLTAAGMLRDLHIVLDSKTSIRIVVPLTT
SIO_010081: AVI_RS24500
subclass of: SO_0000673
so part of: AVI_RS24500
location: complement(10347..10769)
location: region:10347-10769:-1
so has part: feature:10347-10769:-1:exon

WP_234618160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10347-10769:-1:exon

AVI_RS24505
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24505
old locus tag: Avi_8011
pseudo: true
so part of: sequence
location: 11011..>11859
location: region:11011-11859:1
so has part: feature:11011-11859:1:exon
subclass of: SO_0000010

position:11011:1
position: 11011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11859:1
position: 11859
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11011-11859:1:exon

AVI_RS24505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24505
old locus tag: Avi_8011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015931502.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: AVI_RS24505
subclass of: SO_0000673
so part of: AVI_RS24505
location: 11011..>11859
location: region:11011-11859:1
so has part: feature:11011-11859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11011-11859:1:exon

AVI_RS24510
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24510
old locus tag: Avi_8012
so part of: sequence
location: 11908..12624
location: region:11908-12624:1
so has part: feature:11908-12624:1:exon
subclass of: SO_0000010

position:11908:1
position: 11908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12624:1
position: 12624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11908-12624:1:exon

AVI_RS24510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24510
old locus tag: Avi_8012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MTRFARDPLYRLHRFTAEVIAHAVWLYFRFPLSLRMVEDMLAARGLIVSHQTVRLWAEKFGRHFANDIRKRSAGRLGDKWHFDEVVITIAGKKHWLWRAVDQDGFVLDVLVQSRRDAKAAKRLMRKLLKGQCRAPRVIITDKLRSYGAAKRDIMPGIEHRSHKGLNNRAENSHQPVRRRERIMRRFKSARHLQRFVSIHDPIANLFHVPRHDIPSTHHRELRETAMQTWYQIAGIQAA
SIO_010081: AVI_RS24510
subclass of: SO_0000673
so part of: AVI_RS24510
location: 11908..12624
location: region:11908-12624:1
so has part: feature:11908-12624:1:exon

WP_012648919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11908-12624:1:exon

AVI_RS24515
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24515
old locus tag: Avi_8013
so part of: sequence
location: 12833..13006
location: region:12833-13006:1
so has part: feature:12833-13006:1:exon
subclass of: SO_0000010

position:12833:1
position: 12833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13006:1
position: 13006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12833-13006:1:exon

AVI_RS24515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24515
old locus tag: Avi_8013
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVIDDNVGSSRDWDGDTAEAAAFWNERIATLPDREKRDVETFLPSLNDESDEPASK
SIO_010081: AVI_RS24515
subclass of: SO_0000673
so part of: AVI_RS24515
location: 12833..13006
location: region:12833-13006:1
so has part: feature:12833-13006:1:exon

WP_234618235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12833-13006:1:exon

AVI_RS24520
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24520
old locus tag: Avi_8014
so part of: sequence
location: 13035..13523
location: region:13035-13523:1
so has part: feature:13035-13523:1:exon
subclass of: SO_0000010

position:13035:1
position: 13035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13523:1
position: 13523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13035-13523:1:exon

AVI_RS24520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24520
old locus tag: Avi_8014
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004673664.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNVEKVLFPRSDWVPNNQRFPVLVYRAAMLDCQSSDFEHTFARNGWTGIWRNGVFDYQHYHSGAHEVLGVGRGNATLLIGGPTGKAFEVATGDCLILPAGTGHRKLESSPDFQVVGAYPPGQHADIQTEAASPEMQEAISSLPLPDTDPLFGSSGGILETWR
SIO_010081: AVI_RS24520
subclass of: SO_0000673
so part of: AVI_RS24520
location: 13035..13523
location: region:13035-13523:1
so has part: feature:13035-13523:1:exon

WP_012648921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13035-13523:1:exon

AVI_RS24525
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24525
so part of: sequence
location: 13520..13708
location: region:13520-13708:1
so has part: feature:13520-13708:1:exon
subclass of: SO_0000010

position:13520:1
position: 13520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13708:1
position: 13708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13520-13708:1:exon

AVI_RS24525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24525
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRIPTSDDPAPERRRALSRLRQMEIIEGLLEFDLASLEQYADAVAEERQNLTKRFLPTGSDC
SIO_010081: AVI_RS24525
subclass of: SO_0000673
so part of: AVI_RS24525
location: 13520..13708
location: region:13520-13708:1
so has part: feature:13520-13708:1:exon

WP_041699447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13520-13708:1:exon

AVI_RS24530
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24530
old locus tag: Avi_8015
so part of: sequence
location: 13818..14705
location: region:13818-14705:1
so has part: feature:13818-14705:1:exon
subclass of: SO_0000010

position:13818:1
position: 13818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14705:1
position: 14705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13818-14705:1:exon

AVI_RS24530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24530
old locus tag: Avi_8015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017996623.1
GO function: GO:0045027 - DNA end binding [Evidence IEA]
GO process: GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ku protein
translation: MAAHRAQWKGHLKVGELSCAVGLYTAASTSERLSFHMINEATGNRLRREFIDSETEETVERDQQVKGFETGNGDYIMIDPEEVAAVVPDSDKMLEAEAFIPCGKIDDVYFDKPYYLVPVDDADHDAFTSIRDALVKTSATAIARTVLFRRMRTVLIRAHGKGIIATTLNFDYEVRSSQEAFKDVAKIKVEAEMLELAKHIIGTKKGDFDPAKFDDRYEDALAALVKAKAEGKALPKPKPVKVSKPNDLLKALQESAGMGKPSAKKPKAANANAGKKAPASKSTKSRAKPAAKKAS
SIO_010081: AVI_RS24530
subclass of: SO_0000673
so part of: AVI_RS24530
location: 13818..14705
location: region:13818-14705:1
so has part: feature:13818-14705:1:exon

WP_012648922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13818-14705:1:exon

AVI_RS24535
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24535
old locus tag: Avi_8016
so part of: sequence
location: 14709..15530
location: region:14709-15530:1
so has part: feature:14709-15530:1:exon
subclass of: SO_0000010

position:14709:1
position: 14709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15530:1
position: 15530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14709-15530:1:exon

AVI_RS24535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24535
old locus tag: Avi_8016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012648923.1
GO function: GO:0045027 - DNA end binding [Evidence IEA]
GO process: GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ku protein
translation: MAPRRPYWRGYLKLSLVTCPVAMTPATSESEKVRFHTLNKDTGNRVVSHYVDSVTGKPVKDEQEAKGYERGENDYVLLTDEDLESVELETVRTIDIEKFIPRGSIEWVYLETPFYLTANDKIGDEAFAVIRQAMEAEDVVGVSRVVLGRRERAVVLEPRGEGIVVWTLRFGDEVRPESEYFTGIEKKSDAKGVSAVEAVIKKRMQDWSPEMVSDPIQESLLKLIADKKKAKKPSKAKASKSTKGDDEEKSNVVNIMDALKKSVAKELKSRKAG
SIO_010081: AVI_RS24535
subclass of: SO_0000673
so part of: AVI_RS24535
location: 14709..15530
location: region:14709-15530:1
so has part: feature:14709-15530:1:exon

WP_012648923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14709-15530:1:exon

AVI_RS24540
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: ligD
locus tag: AVI_RS24540
old locus tag: Avi_8017
so part of: sequence
location: complement(15594..18275)
location: region:15594-18275:-1
so has part: feature:15594-18275:-1:exon
subclass of: SO_0000010

position:15594:-1
position: 15594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18275:-1
position: 18275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15594-18275:-1:exon

AVI_RS24540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: ligD
locus tag: AVI_RS24540
old locus tag: Avi_8017
EC number: 6.5.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013637238.1
GO process: GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA ligase D
translation: MPDNLSKYREKRDFKKTAEPSGEVGVKSSNRRRFVIQKHDATRLHYDLRIEMDGVFKSWAVTKGPSLDPHDKRLAVEVEDHPLDYGDFEGTIPKGQYGGGTVMLWDRGYWEPEGNKTAEQALAKGDFKFTLEGERLHGSFVLVRMRGREGEKRTNWLLIKHHDDHAVEENGAAILEENDTSVASGRTMEAIASGKGRKPKPFMTQGSVVEADAVWDSTEGLAADERKAGTKTKAKPTKKAAAAAKQPNTGMPEFVPPQLCETFSRPPSAEGWIHEVKFDGYRIQMRVVDGNVTLKTRKGLDWTAKWPAIAKAASSLPDCIIDGEICALDNHGAPDFAALQAALSEEKTDDLVFFGFDLLFEGEEDLREAPLTERKERLSAMLSDAGDDPRLRFVEHFETGGDAVLKSACRLSLEGIVSKKGDAPYQSGRSDTWTKSKCRAGHEVVIGAYATTNGAFRSLLVGVYRGDHFVYVGRVGTGYGAKVVDQILPKLQALEASKSPFTGIGAPKKAAEIVWLKPELVAEIEFAGWTADGQVRQAAFKGLREDKPAKEVEAEKPAEPAEVDTPDPETARKPAPTPTTSSRLRKGAKVDVMGVLVSSPDKELWPDALDGEPVTKVDLAHYYEAVGPWLIDHIKGRPCSIIRTPDGIGGEQFFQRHAMQGTSNLIEQVKVSGDKQPYLQIGRVEGLAAIAQIGGAELHPWNCEPYQPEVPGRLVFDLDPGPDVDFATVVEGAREIRDRLEELGLVSFCKTTGGKGLHVVTPLAVPKGKKLSWDEGKAFAHDVCLQMARDNPELYLTKMSKAQREGRIFLDYLRNDRTSTAVAPLSPRARPGATVSMPLNWAQVKKGLDPKRFTIRTVPGLLKDNTAWQDYCDGQRPLEQAIKRLEKLMRRAA
SIO_010081: AVI_RS24540
subclass of: SO_0000673
so part of: AVI_RS24540
location: complement(15594..18275)
location: region:15594-18275:-1
so has part: feature:15594-18275:-1:exon

WP_012648924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15594-18275:-1:exon

AVI_RS29940
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS29940
old locus tag: Avi_8018
so part of: sequence
location: complement(18618..19681)
location: region:18618-19681:-1
so has part: feature:18618-19681:-1:exon
subclass of: SO_0000010

position:18618:-1
position: 18618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19681:-1
position: 19681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18618-19681:-1:exon

AVI_RS29940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS29940
old locus tag: Avi_8018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012553005.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MGQAIGLREDFDGASLRRLARLSKSAPQARRLLALAQIYEGSSRSEAARIGGVTLQIVRDWVIRFNARGPDGLLDGKAPGKPSILNDAQRRALVEAVERGPIPAIHGVVRWRLIDLVYLLHEEFAVSLDETTVSRELKKLGYVKLTARPRHHAQNELAMETFKKGFAAEVAKVRTSLPKGTSIEVWFQDEARVGQKNTITRRWARRGTRPSAPKDQRTKSAYIFGAICPEQGKGAGLILPFCNTETMSLHLAEIALAVAPGAHAVVLMDQAGWHMTDKLEVPDNISIIALPAKCPELNPVENVWQFMRDNWLSNRVFTSHDNILDHCCEAWNKLVDQPWRIMTIGRRKWARQF
SIO_010081: AVI_RS29940
subclass of: SO_0000673
so part of: AVI_RS29940
location: complement(join(18618..19187,19190..19681))
location: region:18618-19681:-1
so has part: feature:19190-19681:-1:exon
so has part: feature:18618-19187:-1:exon

WP_174083776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19190-19681:-1:exon

position:19190:-1
position: 19190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18618-19187:-1:exon

position:19187:-1
position: 19187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AVI_RS24555
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24555
old locus tag: Avi_8019
so part of: sequence
location: 19976..20953
location: region:19976-20953:1
so has part: feature:19976-20953:1:exon
subclass of: SO_0000010

position:19976:1
position: 19976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20953:1
position: 20953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19976-20953:1:exon

AVI_RS24555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24555
old locus tag: Avi_8019
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012760334.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR03885 family FMN-dependent LLM class oxidoreductase
translation: MIIGYHASHEQFAPSDLLSYVQAAQDAGFQAIMTSDHIAPWLSRQGNSGNNWAWLGAAMAKTSLPFGSLAIPGGLRYHPTVLAHLVGTISEMFPGRLRWIAMGSGEALNEHVVGGKWPAKAERNARLLAGTEIIRALLRGEEVDRHDRWFTVDKARLWSLPATPPALFAAALSNETAQWAGEWSDGLVTVNKPKQKLDEMRDVYRHGGGQGKPLALQVQVSWAQTEAQARAAAFEEWRNATLPPAALADLPMPKDFERATRHVKPEDIDEVIPLVTGPDRLFELIFVAKDCGFEEMFIHNVSRDQIGFINFMKRQVLPALRVSET
SIO_010081: AVI_RS24555
subclass of: SO_0000673
so part of: AVI_RS24555
location: 19976..20953
location: region:19976-20953:1
so has part: feature:19976-20953:1:exon

WP_012648926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19976-20953:1:exon

AVI_RS24560
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24560
old locus tag: Avi_8020
so part of: sequence
location: 21013..22674
location: region:21013-22674:1
so has part: feature:21013-22674:1:exon
subclass of: SO_0000010

position:21013:1
position: 21013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22674:1
position: 22674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21013-22674:1:exon

AVI_RS24560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24560
old locus tag: Avi_8020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003586266.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha-amylase family protein
translation: MINDLWYKNAVVYCLSVETFMDANGDGVGDFQGLQRRLDYLAGLGVNAIWLMPFQASPGLDDGYDVSDYYNIDPRYGTLGDFVEFTHSAKQRGIRVLIDLVVNHTSDQHPWFKQACADKNSRYRDWYVWSEKKPENADEGMVFPGVQKTTWTRDEKSGEYYFHRFFKFQPDLNTSNPHVQAEILKIMGFWIQLGVSGFRMDAVPFVIAEKGADVKESKPQFDLLRSFREFLQWRKGDSIILAEANVVPKENLQYFGDDGDRMQMMFNFHVNQALFYALASADTRPLDKAMNETRERPQTGQWGIFLRNHDELDLGRLTEKQRQAVFSAFGPDKDMQLYDRGIRRRLAPMLGGDTRRLRLAYSLMYSLPGTPVLRYGDEIGMGDDLALEERNCARTPMQWSTEPHGGFTKAEKPVLPVIEGGPYGFEHVNVAAQRRDAESMLNWTERMIRMRKEAPEIGWGSFSVLDCGDTGVLAMRYDWRHNAVVIIHNLHDKPVDISFDPGVGESGRVLIDIADGSDSSADEKGRHNMVIEPFGYRWYRAGGLDYLLKRSDI
SIO_010081: AVI_RS24560
subclass of: SO_0000673
so part of: AVI_RS24560
location: 21013..22674
location: region:21013-22674:1
so has part: feature:21013-22674:1:exon

WP_012648927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21013-22674:1:exon

AVI_RS29950
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS29950
pseudo: true
so part of: sequence
location: <22897..>23130
location: region:22897-23130:1
so has part: feature:22897-23130:1:exon
subclass of: SO_0000010

position:22897:1
position: 22897
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:23130:1
position: 23130
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22897-23130:1:exon

AVI_RS29950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS29950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611299.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AVI_RS29950
subclass of: SO_0000673
so part of: AVI_RS29950
location: <22897..>23130
location: region:22897-23130:1
so has part: feature:22897-23130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22897-23130:1:exon

AVI_RS24565
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24565
old locus tag: Avi_8022
pseudo: true
so part of: sequence
location: complement(23158..>23991)
location: region:23158-23991:-1
so has part: feature:23158-23991:-1:exon
subclass of: SO_0000010

position:23158:-1
position: 23158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23991:-1
position: 23991
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23158-23991:-1:exon

AVI_RS24565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24565
old locus tag: Avi_8022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004675975.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: serine recombinase
SIO_010081: AVI_RS24565
subclass of: SO_0000673
so part of: AVI_RS24565
location: complement(23158..>23991)
location: region:23158-23991:-1
so has part: feature:23158-23991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23158-23991:-1:exon

AVI_RS24570
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24570
old locus tag: Avi_8024
so part of: sequence
location: 24042..24758
location: region:24042-24758:1
so has part: feature:24042-24758:1:exon
subclass of: SO_0000010

position:24042:1
position: 24042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24758:1
position: 24758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24042-24758:1:exon

AVI_RS24570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24570
old locus tag: Avi_8024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MTRFARDPLYRRHRFPAEVIAHAVWLYFRFPLSLRMVEDMLAARGLIVSHQTVRLWAEKFGRHFANDIRRRSAGRLGDKWHFDEVVITIAGKKHWLWRAVDQDGFVLDVLVQSRRDAKAAKRLMRKLLKGQCRAPRVIITDKLRSYGAAKRDIMPGIEHRSHKGLNNRAENSHQPVRRRERIMRRFKSARHLQRFVSIHDPIANLFHVPRHDIPSTHHRELRETAMQTWYQIAGIQAA
SIO_010081: AVI_RS24570
subclass of: SO_0000673
so part of: AVI_RS24570
location: 24042..24758
location: region:24042-24758:1
so has part: feature:24042-24758:1:exon

WP_012648935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24042-24758:1:exon

AVI_RS24575
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24575
old locus tag: Avi_8025
so part of: sequence
location: 24955..26739
location: region:24955-26739:1
so has part: feature:24955-26739:1:exon
subclass of: SO_0000010

position:24955:1
position: 24955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26739:1
position: 26739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24955-26739:1:exon

AVI_RS24575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24575
old locus tag: Avi_8025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003500561.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PAS domain-containing methyl-accepting chemotaxis protein
translation: MRLLSIFGNDLAYIMKAFDRSQAIISFTPDGKILDANENFCKAIGYTREEIVGKNHRMFIDPKEAQLPEYKAFWKRLADGEYDQRQYKRIGKGGKEIWIEASYNPVIRGGKVVKVVKIATEITASKHESLESKGKLDALSRAQAIIEFMPDGKILTANKNFLETLGYTLEEIVGKHHGIFCEPDFVASREYSEFWTRLAKGEYYSDEFKRIRKDGSPVYIQATYNPILDEDGNVFKVVKFATDVSGRVLALQKIGSGLERLSDCNIRVTIDEPFVEEFEHLRHDFNESLAKFQETLEEVLSQTTMLSSKSGDMSESANGIAQRSEQQAAALEETSAALEEITVTVRESVGRTAEARDLVRDARSAASKSVQIVNSTVNAMGRIEAASREITNIIDVIDQISFQTNLLALNAGVEAARAGDAGKGFAVVAQEVRELAQRSTKAAKEIAVLIGNSSNAVKDGVRLVGETGDALKSIEGYVQSIDANIDGIALASSEQSTSLNEINSAVNSLDQMTQQNAGMVSSMGTIAEAVASGAAGLEALVKRFKLNRREWIREPGSEAAKLGPESRGYGKNTIYQPERAHQQTKGSSKVKLAS
SIO_010081: AVI_RS24575
subclass of: SO_0000673
so part of: AVI_RS24575
location: 24955..26739
location: region:24955-26739:1
so has part: feature:24955-26739:1:exon

WP_012648929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24955-26739:1:exon

AVI_RS24580
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24580
old locus tag: Avi_8027
so part of: sequence
location: complement(27093..27371)
location: region:27093-27371:-1
so has part: feature:27093-27371:-1:exon
subclass of: SO_0000010

position:27093:-1
position: 27093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27371:-1
position: 27371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27093-27371:-1:exon

AVI_RS24580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24580
old locus tag: Avi_8027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011982965.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MTTTNEIADKIASEQSLTRAQAKTIVESVFKHITDAALACAETSIPSFGKFKIKDTPERQGRNPATGATIKIAASKKLTFTPGKAVKDALNA
SIO_010081: AVI_RS24580
subclass of: SO_0000673
so part of: AVI_RS24580
location: complement(27093..27371)
location: region:27093-27371:-1
so has part: feature:27093-27371:-1:exon

WP_012648930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27093-27371:-1:exon

AVI_RS24585
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24585
old locus tag: Avi_8029
so part of: sequence
location: 28128..28448
location: region:28128-28448:1
so has part: feature:28128-28448:1:exon
subclass of: SO_0000010

position:28128:1
position: 28128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28448:1
position: 28448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28128-28448:1:exon

AVI_RS24585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24585
old locus tag: Avi_8029
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012708885.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MNNISLAEQPDFVETSAALLQAMANPARINILIILAEREVSVGPLSELVGLSQSALSQHLAKLRQAGLVSTRREAHTVYYICKSSAVLRILAILSEFYTKRTFFDT
SIO_010081: AVI_RS24585
subclass of: SO_0000673
so part of: AVI_RS24585
location: 28128..28448
location: region:28128-28448:1
so has part: feature:28128-28448:1:exon

WP_012648931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28128-28448:1:exon

AVI_RS24590
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24590
pseudo: true
so part of: sequence
location: complement(28512..29234)
location: region:28512-29234:-1
so has part: feature:28512-29234:-1:exon
subclass of: SO_0000010

position:28512:-1
position: 28512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29234:-1
position: 29234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28512-29234:-1:exon

AVI_RS24590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: AVI_RS24590
subclass of: SO_0000673
so part of: AVI_RS24590
location: complement(28512..29234)
location: region:28512-29234:-1
so has part: feature:28512-29234:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28512-29234:-1:exon

AVI_RS24595
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24595
old locus tag: Avi_8032
so part of: sequence
location: 29340..30140
location: region:29340-30140:1
so has part: feature:29340-30140:1:exon
subclass of: SO_0000010

position:29340:1
position: 29340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30140:1
position: 30140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29340-30140:1:exon

AVI_RS24595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24595
old locus tag: Avi_8032
inference: COORDINATES: protein motif:HMM:NF024947.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SbcC/MukB-like Walker B domain-containing protein
translation: MDRIFALEETTIVALRQRLRKLDDDVISARAALDSRRKDHAEAEAAGLPEDPPEPLTSALSALEAAIRTRAERIGGIDSELQRDIAARAALAGLEEEIKQTQSELDVWEAVDHGAGSRSGDKFARVAHTITLDVLVDHANHHLVDLNPRYRLRRAADLALQVEDRVMGDEACATRSLSGGERFLVSLALALALSRMGGKGGLASTLFIDEGFGSLDAGSLDFGDRCAGKPSVTRSSGRCHQPCRGDEGTYPHAYSREQTRKREKRH
SIO_010081: AVI_RS24595
subclass of: SO_0000673
so part of: AVI_RS24595
location: 29340..30140
location: region:29340-30140:1
so has part: feature:29340-30140:1:exon

WP_012648932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29340-30140:1:exon

AVI_RS24600
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24600
old locus tag: Avi_8034
pseudo: true
so part of: sequence
location: complement(30242..>30708)
location: region:30242-30708:-1
so has part: feature:30242-30708:-1:exon
subclass of: SO_0000010

position:30242:-1
position: 30242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30708:-1
position: 30708
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30242-30708:-1:exon

AVI_RS24600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24600
old locus tag: Avi_8034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003518564.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF1612 domain-containing protein
SIO_010081: AVI_RS24600
subclass of: SO_0000673
so part of: AVI_RS24600
location: complement(30242..>30708)
location: region:30242-30708:-1
so has part: feature:30242-30708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30242-30708:-1:exon

AVI_RS24605
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24605
old locus tag: Avi_8035
pseudo: true
so part of: sequence
location: complement(30726..>31364)
location: region:30726-31364:-1
so has part: feature:30726-31364:-1:exon
subclass of: SO_0000010

position:30726:-1
position: 30726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31364:-1
position: 31364
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30726-31364:-1:exon

AVI_RS24605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24605
old locus tag: Avi_8035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010665991.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: AVI_RS24605
subclass of: SO_0000673
so part of: AVI_RS24605
location: complement(30726..>31364)
location: region:30726-31364:-1
so has part: feature:30726-31364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30726-31364:-1:exon

AVI_RS29955
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS29955
old locus tag: Avi_8039
pseudo: true
so part of: sequence
location: 31430..32130
location: region:31430-32130:1
so has part: feature:31430-32130:1:exon
subclass of: SO_0000010

position:31430:1
position: 31430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32130:1
position: 32130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31430-32130:1:exon

AVI_RS29955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS29955
old locus tag: Avi_8039
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011982795.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: AVI_RS29955
subclass of: SO_0000673
so part of: AVI_RS29955
location: 31430..32130
location: region:31430-32130:1
so has part: feature:31430-32130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31430-32130:1:exon

AVI_RS31270
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31270
so part of: sequence
location: complement(32038..32232)
location: region:32038-32232:-1
so has part: feature:32038-32232:-1:exon
subclass of: SO_0000010

position:32038:-1
position: 32038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32232:-1
position: 32232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32038-32232:-1:exon

AVI_RS31270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKMKPAAIVTMEEKFWCCYINFVMPAKPLALEFSGGASRAIPGIEGFEAMVANCLCGSAAGWN
SIO_010081: AVI_RS31270
subclass of: SO_0000673
so part of: AVI_RS31270
location: complement(32038..32232)
location: region:32038-32232:-1
so has part: feature:32038-32232:-1:exon

WP_162292250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32038-32232:-1:exon

AVI_RS29965
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS29965
pseudo: true
so part of: sequence
location: complement(<32988..>33341)
location: region:32988-33341:-1
so has part: feature:32988-33341:-1:exon
subclass of: SO_0000010

position:32988:-1
position: 32988
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:33341:-1
position: 33341
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32988-33341:-1:exon

AVI_RS29965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS29965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611883.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: AVI_RS29965
subclass of: SO_0000673
so part of: AVI_RS29965
location: complement(<32988..>33341)
location: region:32988-33341:-1
so has part: feature:32988-33341:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32988-33341:-1:exon

AVI_RS24625
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24625
old locus tag: Avi_8044
so part of: sequence
location: 33343..34059
location: region:33343-34059:1
so has part: feature:33343-34059:1:exon
subclass of: SO_0000010

position:33343:1
position: 33343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34059:1
position: 34059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33343-34059:1:exon

AVI_RS24625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24625
old locus tag: Avi_8044
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MTRFARDPLYRRHRFPAEVIAHAVWLYFRFPLSLRMVEDMLAARGLIVSHQTVRLWAEKFGRHFANDIRRRSAGRLGDKWHFDEVVITIAGKKHWLWRAVDQDGFVLDVLVQSRRDAKAAKRLMRKLLKGQCRAPRVIITDKLRSYGAAKRDIMPGIEHRSHKGLNNRAENSHQPVRRRERIMRRFKSARHLQRFVSIHDPIANLFHVPRHDIPSTHHRELRETAMQTWYQIAGIQAA
SIO_010081: AVI_RS24625
subclass of: SO_0000673
so part of: AVI_RS24625
location: 33343..34059
location: region:33343-34059:1
so has part: feature:33343-34059:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33343-34059:1:exon

AVI_RS24635
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24635
old locus tag: Avi_8047
so part of: sequence
location: complement(34845..35393)
location: region:34845-35393:-1
so has part: feature:34845-35393:-1:exon
subclass of: SO_0000010

position:34845:-1
position: 34845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35393:-1
position: 35393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34845-35393:-1:exon

AVI_RS24635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24635
old locus tag: Avi_8047
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTASKVFLAVIPAAMMIVVLVFMAGIEHWLAALSKTGQAKLMLGRIGLALPYATAAAIGTLFLFASNGAAGVKAAGWGVVSGSGVVVAIAVLREGVRLSGITGEVPAGQSVFGYADPATMLGASTTFLAGVFALRVATKSVVWDPNFECSKASSAFVMARKRTVGVAGNTTASRTSSLNPPR
SIO_010081: AVI_RS24635
subclass of: SO_0000673
so part of: AVI_RS24635
location: complement(34845..35393)
location: region:34845-35393:-1
so has part: feature:34845-35393:-1:exon

WP_012648936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34845-35393:-1:exon

AVI_RS24640
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: traD
locus tag: AVI_RS24640
old locus tag: Avi_8048
so part of: sequence
location: complement(35380..35595)
location: region:35380-35595:-1
so has part: feature:35380-35595:-1:exon
subclass of: SO_0000010

position:35380:-1
position: 35380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35595:-1
position: 35595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35380-35595:-1:exon

AVI_RS24640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: traD
locus tag: AVI_RS24640
old locus tag: Avi_8048
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020046837.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system coupling protein TraD
translation: MARTITNDARKKDTREKIELGGLIVKAGLRYEKRALLLGLLIDAGRRLKGNDGEQSRLTAIGAEAFAHDGE
SIO_010081: AVI_RS24640
subclass of: SO_0000673
so part of: AVI_RS24640
location: complement(35380..35595)
location: region:35380-35595:-1
so has part: feature:35380-35595:-1:exon

WP_012648937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35380-35595:-1:exon

AVI_RS24645
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24645
old locus tag: Avi_8049
so part of: sequence
location: complement(35600..35896)
location: region:35600-35896:-1
so has part: feature:35600-35896:-1:exon
subclass of: SO_0000010

position:35600:-1
position: 35600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35896:-1
position: 35896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35600-35896:-1:exon

AVI_RS24645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24645
old locus tag: Avi_8049
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007637593.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraC family protein
translation: MKKPSLKIREEIARLQDQLRQAETREAERVGRIALKAGLGEIEIEETELQAAFEEITGRFRGGKAASTGKRNAGDGRTAGETVTTIETGAAASSGREA
SIO_010081: AVI_RS24645
subclass of: SO_0000673
so part of: AVI_RS24645
location: complement(35600..35896)
location: region:35600-35896:-1
so has part: feature:35600-35896:-1:exon

WP_012648938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35600-35896:-1:exon

AVI_RS24650
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: traA
locus tag: AVI_RS24650
old locus tag: Avi_8050
pseudo: true
so part of: sequence
location: 36152..39445
location: region:36152-39445:1
so has part: feature:36152-39445:1:exon
subclass of: SO_0000010

position:36152:1
position: 36152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39445:1
position: 39445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36152-39445:1:exon

AVI_RS24650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: traA
locus tag: AVI_RS24650
old locus tag: Avi_8050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523838.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
SIO_010081: AVI_RS24650
subclass of: SO_0000673
so part of: AVI_RS24650
location: 36152..39445
location: region:36152-39445:1
so has part: feature:36152-39445:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36152-39445:1:exon

AVI_RS31580
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31580
pseudo: true
so part of: sequence
location: 39676..>39834
location: region:39676-39834:1
so has part: feature:39676-39834:1:exon
subclass of: SO_0000010

position:39676:1
position: 39676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39834:1
position: 39834
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39676-39834:1:exon

AVI_RS31580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31580
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015918241.1
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: conjugal transfer protein TraH
SIO_010081: AVI_RS31580
subclass of: SO_0000673
so part of: AVI_RS31580
location: 39676..>39834
location: region:39676-39834:1
so has part: feature:39676-39834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39676-39834:1:exon

AVI_RS24660
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24660
pseudo: true
so part of: sequence
location: complement(39909..41259)
location: region:39909-41259:-1
so has part: feature:39909-41259:-1:exon
subclass of: SO_0000010

position:39909:-1
position: 39909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41259:-1
position: 41259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39909-41259:-1:exon

AVI_RS24660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611865.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: AVI_RS24660
subclass of: SO_0000673
so part of: AVI_RS24660
location: complement(39909..41259)
location: region:39909-41259:-1
so has part: feature:39909-41259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39909-41259:-1:exon

AVI_RS31585
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31585
old locus tag: Avi_8060
pseudo: true
so part of: sequence
location: <41426..41548
location: region:41426-41548:1
so has part: feature:41426-41548:1:exon
subclass of: SO_0000010

position:41426:1
position: 41426
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:41548:1
position: 41548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41426-41548:1:exon

AVI_RS31585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31585
old locus tag: Avi_8060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011541357.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS481 family transposase
SIO_010081: AVI_RS31585
subclass of: SO_0000673
so part of: AVI_RS31585
location: <41426..41548
location: region:41426-41548:1
so has part: feature:41426-41548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41426-41548:1:exon

AVI_RS24670
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24670
old locus tag: Avi_8061
pseudo: true
so part of: sequence
location: complement(41545..42644)
location: region:41545-42644:-1
so has part: feature:41545-42644:-1:exon
subclass of: SO_0000010

position:41545:-1
position: 41545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42644:-1
position: 42644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41545-42644:-1:exon

AVI_RS24670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24670
old locus tag: Avi_8061
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019052766.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: AVI_RS24670
subclass of: SO_0000673
so part of: AVI_RS24670
location: complement(41545..42644)
location: region:41545-42644:-1
so has part: feature:41545-42644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41545-42644:-1:exon

AVI_RS29970
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS29970
old locus tag: Avi_8062
pseudo: true
so part of: sequence
location: complement(42795..43498)
location: region:42795-43498:-1
so has part: feature:42795-43498:-1:exon
subclass of: SO_0000010

position:42795:-1
position: 42795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43498:-1
position: 43498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42795-43498:-1:exon

AVI_RS29970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS29970
old locus tag: Avi_8062
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003568320.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: AVI_RS29970
subclass of: SO_0000673
so part of: AVI_RS29970
location: complement(42795..43498)
location: region:42795-43498:-1
so has part: feature:42795-43498:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42795-43498:-1:exon

AVI_RS29360
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS29360
old locus tag: Avi_8066
so part of: sequence
location: complement(44012..44956)
location: region:44012-44956:-1
so has part: feature:44012-44956:-1:exon
subclass of: SO_0000010

position:44012:-1
position: 44012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44956:-1
position: 44956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44012-44956:-1:exon

AVI_RS29360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS29360
old locus tag: Avi_8066
EC number: 2.7.7.65
inference: COORDINATES: protein motif:HMM:TIGR00254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor domain-containing diguanylate cyclase
translation: MKELFERAETGSATSFRDLHIILDAMPVAMSWATLPGGDIRFVNRTFIRLFGYPESRFATVDEWIAEVYATSAERRTARERWAALWRGDQSGIAEIDPLECRVRCADGTYRTTLHRGTLLWDVGIGIATFEDISDRKIAEDAIRRIAMEDPLTELANRRALHERWETEVTSAPTKANLKLGVLLVDLDGFKPVNDRLGHEAGDQVLKMVADRLRNAVRDTDLVGRIGGDEFVVLLSSLQSDTQAEAICDRINATFDAPFVFDVETITLGASIGVSLYPQDATDLAGLIRQADQALYRRKRTGRGGWEWFSNPAA
SIO_010081: AVI_RS29360
subclass of: SO_0000673
so part of: AVI_RS29360
location: complement(44012..44956)
location: region:44012-44956:-1
so has part: feature:44012-44956:-1:exon

WP_012648940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44012-44956:-1:exon

AVI_RS24690
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24690
old locus tag: Avi_8067
so part of: sequence
location: complement(44953..45393)
location: region:44953-45393:-1
so has part: feature:44953-45393:-1:exon
subclass of: SO_0000010

position:44953:-1
position: 44953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45393:-1
position: 45393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44953-45393:-1:exon

AVI_RS24690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24690
old locus tag: Avi_8067
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003544853.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MSNFEDMKRGPKVPNPVDIEVGERIKARRRILGMSQGKLAEALGVTFQQVQKYKKGKNRVGASRLQNVATIFGVPFSYFFPDQSSGTEGDITSNPGKEITAFLANNEGLDLNRAFALISSPLVRKRVVGLVKSISEAGLGEAGSGG
SIO_010081: AVI_RS24690
subclass of: SO_0000673
so part of: AVI_RS24690
location: complement(44953..45393)
location: region:44953-45393:-1
so has part: feature:44953-45393:-1:exon

WP_012648941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44953-45393:-1:exon

AVI_RS24695
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24695
old locus tag: Avi_8068
pseudo: true
so part of: sequence
location: complement(45390..47601)
location: region:45390-47601:-1
so has part: feature:45390-47601:-1:exon
subclass of: SO_0000010

position:45390:-1
position: 45390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47601:-1
position: 47601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45390-47601:-1:exon

AVI_RS24695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24695
old locus tag: Avi_8068
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017335227.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: EAL domain-containing protein
SIO_010081: AVI_RS24695
subclass of: SO_0000673
so part of: AVI_RS24695
location: complement(45390..47601)
location: region:45390-47601:-1
so has part: feature:45390-47601:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45390-47601:-1:exon

AVI_RS24700
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24700
old locus tag: Avi_8070
so part of: sequence
location: 48131..48883
location: region:48131-48883:1
so has part: feature:48131-48883:1:exon
subclass of: SO_0000010

position:48131:1
position: 48131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48883:1
position: 48883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48131-48883:1:exon

AVI_RS24700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24700
old locus tag: Avi_8070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011654541.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MVLNAITEKLKRQSKDDFKGRHFEAWLIVQAVAWYLRYPLSYRDLEEMVRERGFEIDHSTINRWVLAYAPMIEKRLRQFRRPHCGSVRVNETYVKIRGKWRYVYRAIDKHGNPVDFLLTAKRDLDAAKRFFRKMLKDEPLLSPNKIGTDGANTFPSAIKTLVDSGLLHPDPVHYATKHLQQGIESDHFRLKKNMPKIGGVQSFNTARRTIAGFQAMLWLRKGFGYSGGWIVNDQNDLLARLFGLQKVNKV
SIO_010081: AVI_RS24700
subclass of: SO_0000673
so part of: AVI_RS24700
location: 48131..48883
location: region:48131-48883:1
so has part: feature:48131-48883:1:exon

WP_041699462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48131-48883:1:exon

AVI_RS24705
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24705
pseudo: true
so part of: sequence
location: complement(49263..49979)
location: region:49263-49979:-1
so has part: feature:49263-49979:-1:exon
subclass of: SO_0000010

position:49263:-1
position: 49263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49979:-1
position: 49979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49263-49979:-1:exon

AVI_RS24705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: AVI_RS24705
subclass of: SO_0000673
so part of: AVI_RS24705
location: complement(49263..49979)
location: region:49263-49979:-1
so has part: feature:49263-49979:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49263-49979:-1:exon

AVI_RS24710
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24710
old locus tag: Avi_8073
so part of: sequence
location: complement(49976..51226)
location: region:49976-51226:-1
so has part: feature:49976-51226:-1:exon
subclass of: SO_0000010

position:49976:-1
position: 49976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51226:-1
position: 51226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49976-51226:-1:exon

AVI_RS24710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24710
old locus tag: Avi_8073
inference: COORDINATES: protein motif:HMM:NF021596.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucoamylase family protein
translation: MTNTPPSRSTPLEELLDRVQRTTIAYFWEGAHPVSGLAYDRRLTWGDARNDLVSISGSGFSFLAIIVAVSRGWIDRGQAMERMLLTVAFLKDVPRFHGAFPHFINGSTGEVVPFSHRDDGGDLVETALLLQGLICARQYFDGEAPGERPLRILIQELVDEVERCWYAPEPSRPLYWHWSPKHQWKMALPITGWNEGLLAYILAAGAGRHAIDDNVFHHGWAGNGTLRNGNGYYGHILPVGRPFGGPLFLAHSSFCGLDPSRMRDRYCDYWEQNVAHASIHHAHAVANPHQHAGYGAACWGLTSSHGPRKYIASAPDNDRGIIAPTAALSSFPYLPEAAEAALRYYLVAADGRLWGRYGFVDAFAANGRWISKSYLAVNQGPIVAMIENHRSGLLWNLFMGHCKVNLASINIWDLVA
SIO_010081: AVI_RS24710
subclass of: SO_0000673
so part of: AVI_RS24710
location: complement(49976..51226)
location: region:49976-51226:-1
so has part: feature:49976-51226:-1:exon

WP_041699553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49976-51226:-1:exon

AVI_RS24715
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24715
old locus tag: Avi_8074
so part of: sequence
location: complement(51395..51721)
location: region:51395-51721:-1
so has part: feature:51395-51721:-1:exon
subclass of: SO_0000010

position:51395:-1
position: 51395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51721:-1
position: 51721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51395-51721:-1:exon

AVI_RS24715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24715
old locus tag: Avi_8074
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013637255.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MTGHRSFNDLRKSMAPERRARNDEATKAILEEMALHELRQAREKTQQDVARALHVKQPAVAKLEQRADIYVSNLRRYIEALGGTLEITAKFPDTSVSIKNFSELATEK
SIO_010081: AVI_RS24715
subclass of: SO_0000673
so part of: AVI_RS24715
location: complement(51395..51721)
location: region:51395-51721:-1
so has part: feature:51395-51721:-1:exon

WP_041699465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51395-51721:-1:exon

AVI_RS24720
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24720
so part of: sequence
location: complement(51718..52077)
location: region:51718-52077:-1
so has part: feature:51718-52077:-1:exon
subclass of: SO_0000010

position:51718:-1
position: 51718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52077:-1
position: 52077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51718-52077:-1:exon

AVI_RS24720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010665832.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MSWSVEYTDEFGEWYATLVEAIQDDIVRVVGLLEAKGPQLPFPYSSGIEGSRHEHMRELRIQSGGEPYRVFYAFDPRRTAILLVGGNKTGDDRFYEIMIPVADRLYDNYLIEIGKEGLI
SIO_010081: AVI_RS24720
subclass of: SO_0000673
so part of: AVI_RS24720
location: complement(51718..52077)
location: region:51718-52077:-1
so has part: feature:51718-52077:-1:exon

WP_041699467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51718-52077:-1:exon

AVI_RS31275
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31275
so part of: sequence
location: 52837..53013
location: region:52837-53013:1
so has part: feature:52837-53013:1:exon
subclass of: SO_0000010

position:52837:1
position: 52837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53013:1
position: 53013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52837-53013:1:exon

AVI_RS31275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015341926.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTNLSLAQNHAFQLSRTLMVPVTLFRTGDEFGVLPSDELDDEDDLEIVHEYVPGGSH
SIO_010081: AVI_RS31275
subclass of: SO_0000673
so part of: AVI_RS31275
location: 52837..53013
location: region:52837-53013:1
so has part: feature:52837-53013:1:exon

WP_041699469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52837-53013:1:exon

AVI_RS24730
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24730
old locus tag: Avi_8077
so part of: sequence
location: 53231..54193
location: region:53231-54193:1
so has part: feature:53231-54193:1:exon
subclass of: SO_0000010

position:53231:1
position: 53231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54193:1
position: 54193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53231-54193:1:exon

AVI_RS24730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24730
old locus tag: Avi_8077
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501418.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3991 and toprim domain-containing protein
translation: MEKRKLEDLRDRVPCAVVLEQAGFAVDVKESTRRAVKYRRGAEIIIVIHQGRGWFDPLSDAKGDVFNLAAHLDGLSFVESLNQVAALVGFVANEPVWSRTVRDPAPSDTIPERWAKRRKPWRGSMTWRYLQVERRLSETIIRAAIRDDVLREGPQGSMWAAHVNEHGAISGWEERGPDWRGFSTGGSKVLFRLGAIDALRLCVTEAAIDAMSLAAFEGLREGSLYLSTGGGWSPSTDAAVRKLAARAGIQLVAATDANIQGETFASRLRDIADEAGCDWLRLTPPDEDWNDALCAREKEKQEKQNEGRRGLPHARRPRQG
SIO_010081: AVI_RS24730
subclass of: SO_0000673
so part of: AVI_RS24730
location: 53231..54193
location: region:53231-54193:1
so has part: feature:53231-54193:1:exon

WP_041699470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53231-54193:1:exon

AVI_RS24735
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24735
old locus tag: Avi_8078
so part of: sequence
location: 54336..54938
location: region:54336-54938:1
so has part: feature:54336-54938:1:exon
subclass of: SO_0000010

position:54336:1
position: 54336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54938:1
position: 54938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54336-54938:1:exon

AVI_RS24735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24735
old locus tag: Avi_8078
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003525125.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1419 domain-containing protein
translation: MTLSTIRKVFEGVADIRQMFRMFDRHAQRPNRWEGDDSALYSGEWFEIGETCHDYMLEILPPLWMRGEMFAMREFLTGSITSIFFTLLIDGHIRYFHGYCDLADKGSPERMRNAIIERESRPVRAMTREERLEHIWSSTADDYRGYAGERWPSSDHGKRTVLIYGGKEGTFLKRLDQLTDTEISAKLPVHLRYLPDAIAA
SIO_010081: AVI_RS24735
subclass of: SO_0000673
so part of: AVI_RS24735
location: 54336..54938
location: region:54336-54938:1
so has part: feature:54336-54938:1:exon

WP_012648950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54336-54938:1:exon

AVI_RS24740
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24740
old locus tag: Avi_8079
pseudo: true
so part of: sequence
location: 55167..>56528
location: region:55167-56528:1
so has part: feature:55167-56528:1:exon
subclass of: SO_0000010

position:55167:1
position: 55167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56528:1
position: 56528
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55167-56528:1:exon

AVI_RS24740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24740
old locus tag: Avi_8079
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650569.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helicase SNF2 family protein
SIO_010081: AVI_RS24740
subclass of: SO_0000673
so part of: AVI_RS24740
location: 55167..>56528
location: region:55167-56528:1
so has part: feature:55167-56528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55167-56528:1:exon

AVI_RS29975
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS29975
old locus tag: Avi_8080
so part of: sequence
location: 56621..57684
location: region:56621-57684:1
so has part: feature:56621-57684:1:exon
subclass of: SO_0000010

position:56621:1
position: 56621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57684:1
position: 57684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56621-57684:1:exon

AVI_RS29975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS29975
old locus tag: Avi_8080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012553005.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MGQAIGLREDFDGASLRRLARLSKSAPQARRLLALAQIYEGSSRSEAARIGGVTLQIVRDWVIRFNARGPDGLLDGKAPGKPSILNDAQRRALVEAVERGPIPAIHGVVRWRLIDLVYLLHEEFAVSLDETTVSRELKKLGYVKLTARPRHHAQNELAMETFKKGFAAEVAKVRTSLPKGTSIEVWFQDEARVGQKNTITRRWARRGTRPSAPKDQRTKSAYIFGAICPEQGKGAGLILPFCNTETMSLHLAEIALAVAPGAHAVVLMDQAGWHMTDKLEVPDNISIIALPAKCPELNPVENVWQFMRDNWLSNRVFTSHDNILDHCCEAWNKLVDQPWRIMTIGRRKWARQF
SIO_010081: AVI_RS29975
subclass of: SO_0000673
so part of: AVI_RS29975
location: join(56621..57112,57115..57684)
location: region:56621-57684:1
so has part: feature:56621-57112:1:exon
so has part: feature:57115-57684:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56621-57112:1:exon

position:57112:1
position: 57112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57115-57684:1:exon

position:57115:1
position: 57115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AVI_RS24755
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24755
old locus tag: Avi_8083
pseudo: true
so part of: sequence
location: <57721..61396
location: region:57721-61396:1
so has part: feature:57721-61396:1:exon
subclass of: SO_0000010

position:57721:1
position: 57721
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:61396:1
position: 61396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57721-61396:1:exon

AVI_RS24755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24755
old locus tag: Avi_8083
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003508776.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
SIO_010081: AVI_RS24755
subclass of: SO_0000673
so part of: AVI_RS24755
location: <57721..61396
location: region:57721-61396:1
so has part: feature:57721-61396:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57721-61396:1:exon

AVI_RS24760
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24760
old locus tag: Avi_8085
so part of: sequence
location: complement(61659..64496)
location: region:61659-64496:-1
so has part: feature:61659-64496:-1:exon
subclass of: SO_0000010

position:61659:-1
position: 61659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64496:-1
position: 64496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61659-64496:-1:exon

AVI_RS24760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24760
old locus tag: Avi_8085
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRSIVQTFCTAALLSCAVHQAGAEDEIRKRLASPFGISDARGVDAIGETLISSRDRAELGYWFYQQDTLAAVSNAQESQNSTIYLGYGVKGIGRAVGAGGGAFGGGFGPAIGGAATIGGAVVGGYVEDYGDKLIRQGGQLAAAAVTNYLHKEYGRIIRPNGTIDQERLRSFGEENFARMLRDPRFIEQVGDSALMADFKAQITLDQLGVVLKDNKSLLLSSEKTGRQLTELDKGYREVKSLQLKTLGRLDAQGQVLGSIEGKLDRQTLIVSTIATSKLPPRQILALSQAGAFTLDAPVVQALETAASAQELQADFNKAAGVFRDMSTALDVLGVDPEFTRATNGIGNVLSAGGGLAAAITLGEPFSIFSSGAAFLGSVKSLFGGKQEDPTQAALRNVFREIQRLSQQIERNHRQQMEALRRIAEKLESLEDTVNRRFAELELDVAYILQDTRELLYEDVRVCERLVEEFRLAENQALLARGLLGFSLFFETDNRALDYARCMNGLIARQRVISERDFSGMLRADSVEEADTGAHGGKRREAVRRIEQRVLQPTVDYIRLMADGDNAEVVARKLFRPVATLCQALSYHDPEAASCEGAPPSSWPDSRIDRSQYNPGQGALLSPTTAVLLSGFTRAVAPWNGILIERTTGAAARVMSEDEVASVSRRSASRRTRHVLALANATDVLDLNIAQANLLAGVPVIDKASDILDKKIIPAYAQARLMKTPAAINQMLAAPPPNRALPGPNCVAGSEEWNTLCLMEASPTFAKNVVRALVLKRLKARGATINEWRQAIRSPFSDRMREIIGHDVLFEDAAAGLPTSTLGMWAIELPRVYSDPDLEPSAIASAKLCWNPTAVEPLTDDQGKPSKDNPYYTTPASSRCNMIDPFTSSDMLSVAHYTQGYAALLTERELSVGLLRGLCDANPFYPTRYCAFGKPLSEATASRDSD
SIO_010081: AVI_RS24760
subclass of: SO_0000673
so part of: AVI_RS24760
location: complement(61659..64496)
location: region:61659-64496:-1
so has part: feature:61659-64496:-1:exon

WP_012648953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61659-64496:-1:exon

AVI_RS24765
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24765
old locus tag: Avi_8086
so part of: sequence
location: complement(64493..65242)
location: region:64493-65242:-1
so has part: feature:64493-65242:-1:exon
subclass of: SO_0000010

position:64493:-1
position: 64493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65242:-1
position: 65242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64493-65242:-1:exon

AVI_RS24765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24765
old locus tag: Avi_8086
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANKLQMFTLTLACLAPCFGWAEETPTVPPANLAVQILNFDAANPTVPWIRPPEVQFVLLSGCGGGGGGGTTTVTGSGSNTNRVPGKGGGAARLYTIIVPVKADRYDITIGDGGGSAANGMPTTMTGAGAGAAAITLGGGQQGSSVSADGEASPFGPGGKGGTSVAEASGKNPCSGGGGSAAYWTAVGGKGAPGQLTIMPIPDLARFGRVMAMVEDLSQPPKVPDDANSTSGEDEQGPVAAPGGTGSLK
SIO_010081: AVI_RS24765
subclass of: SO_0000673
so part of: AVI_RS24765
location: complement(64493..65242)
location: region:64493-65242:-1
so has part: feature:64493-65242:-1:exon

WP_041699472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64493-65242:-1:exon

AVI_RS24770
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24770
old locus tag: Avi_8089
so part of: sequence
location: complement(65582..66406)
location: region:65582-66406:-1
so has part: feature:65582-66406:-1:exon
subclass of: SO_0000010

position:65582:-1
position: 65582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66406:-1
position: 66406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65582-66406:-1:exon

AVI_RS24770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24770
old locus tag: Avi_8089
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006335205.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isocitrate lyase/phosphoenolpyruvate mutase family protein
translation: MEDKGRTFRQLHEGSGTFIIPNPWDIGTARILAALGFPALATTSAGMAFSLGVPEGIVSRDDTLDNCRAIVAATSLPVSADLEKGFGDSPESAAETIVTAASIGLAGCSLEDHTGQRDNPVYDFTLAVERIAAAAEARRALPSDFVLTARCENFLWGRPDLDDTIKRLQAFEKAGADVLYAPGLHDLDTIRTVCEAVTKPVNIVMGMPGATFGIAELSEAGVKRISVGSALARLAFGAFANAAREMKSAGTFRFSEDAMGFAELEGFFNGTTKA
SIO_010081: AVI_RS24770
subclass of: SO_0000673
so part of: AVI_RS24770
location: complement(65582..66406)
location: region:65582-66406:-1
so has part: feature:65582-66406:-1:exon

WP_012648955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65582-66406:-1:exon

AVI_RS24775
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24775
old locus tag: Avi_8090
pseudo: true
so part of: sequence
location: 66733..68494
location: region:66733-68494:1
so has part: feature:66733-68494:1:exon
subclass of: SO_0000010

position:66733:1
position: 66733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68494:1
position: 68494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66733-68494:1:exon

AVI_RS24775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24775
old locus tag: Avi_8090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003524938.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
SIO_010081: AVI_RS24775
subclass of: SO_0000673
so part of: AVI_RS24775
location: 66733..68494
location: region:66733-68494:1
so has part: feature:66733-68494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66733-68494:1:exon

AVI_RS24780
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24780
old locus tag: Avi_8094
so part of: sequence
location: 68595..69068
location: region:68595-69068:1
so has part: feature:68595-69068:1:exon
subclass of: SO_0000010

position:68595:1
position: 68595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69068:1
position: 69068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68595-69068:1:exon

AVI_RS24780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24780
old locus tag: Avi_8094
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010974883.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAHLAFIAPIGSIISWSDGTPRPSERHHRKLSAWQTNNSSGRLIRKQDEHPVGTTVVPPCFTIHEADYGAGGVIAIRVHRTFSLVSSLTFTIIERPAFGSFRVFDRTGDNAELVHLAASRQAAEEWLSRHGYPNAVIEEVTADEIAADAVEGRAVA
SIO_010081: AVI_RS24780
subclass of: SO_0000673
so part of: AVI_RS24780
location: 68595..69068
location: region:68595-69068:1
so has part: feature:68595-69068:1:exon

WP_012648956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68595-69068:1:exon

AVI_RS24785
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24785
old locus tag: Avi_8095
so part of: sequence
location: 69065..69952
location: region:69065-69952:1
so has part: feature:69065-69952:1:exon
subclass of: SO_0000010

position:69065:1
position: 69065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69952:1
position: 69952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69065-69952:1:exon

AVI_RS24785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24785
old locus tag: Avi_8095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501402.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTVPAMTNVDSTPGFPGVSFGRSIEGFPVARVGDNAFAMMTGRSERHYLATGWKIARPFAEWRREDFYGHSGELADEAAFRGYVLENAEHQREMQALGRYEISAGTHTPWGVSQRTSIYADGVECHSTASHGGFKLSAGRNVQVHPILRLEGGFYEEDCAWATVAITFPDLFTGFERRCAEATIRDWQPDAWEAIFARVLAPGQSHIKDRRTFETEHANDWVVISALRSDHHPGITEVIATCGGKRDPHLEERRFLVPSAQYEVGRFGFVIDETQHAAYHGPSSFLTWSGRRRT
SIO_010081: AVI_RS24785
subclass of: SO_0000673
so part of: AVI_RS24785
location: 69065..69952
location: region:69065-69952:1
so has part: feature:69065-69952:1:exon

WP_012648957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69065-69952:1:exon

AVI_RS24790
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24790
old locus tag: Avi_8097
so part of: sequence
location: 69949..70353
location: region:69949-70353:1
so has part: feature:69949-70353:1:exon
subclass of: SO_0000010

position:69949:1
position: 69949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70353:1
position: 70353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69949-70353:1:exon

AVI_RS24790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24790
old locus tag: Avi_8097
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002718992.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMPSIDAQVELRRMEDACRQTRHQLDLIERQIIRKMTALIPSLGQRKFGHHRGIRPEPEAFVCRYRSNLAAITAERQPEIDALSSKLARQEAAIASFRDRTALMRGCAWAGQQADDDLNPDRSGGHAAECDLTD
SIO_010081: AVI_RS24790
subclass of: SO_0000673
so part of: AVI_RS24790
location: 69949..70353
location: region:69949-70353:1
so has part: feature:69949-70353:1:exon

WP_012648958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69949-70353:1:exon

AVI_RS24795
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24795
old locus tag: Avi_8098
so part of: sequence
location: 70699..71298
location: region:70699-71298:1
so has part: feature:70699-71298:1:exon
subclass of: SO_0000010

position:70699:1
position: 70699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71298:1
position: 71298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70699-71298:1:exon

AVI_RS24795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24795
old locus tag: Avi_8098
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003517406.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKPATQSRQANRPSARVVPLCKGATIEMVRLTCPDEAQALKIAESFGTAILDSDSIRDLHERLIIETATALSDGLGERAMQIHLQRIVGAYVGSAHGAGQFYSRAVTEARDATAKGAGDHRDEDLDGPVGYDSAAQRKREFAADMGIQAHALRMAAEGTVAAYEQIVGETWKPFDRPIEQPGQTLDRKAAAAQMSAFE
SIO_010081: AVI_RS24795
subclass of: SO_0000673
so part of: AVI_RS24795
location: 70699..71298
location: region:70699-71298:1
so has part: feature:70699-71298:1:exon

WP_012648959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70699-71298:1:exon

AVI_RS24800
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24800
old locus tag: Avi_8099
so part of: sequence
location: 71614..72540
location: region:71614-72540:1
so has part: feature:71614-72540:1:exon
subclass of: SO_0000010

position:71614:1
position: 71614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72540:1
position: 72540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71614-72540:1:exon

AVI_RS24800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24800
old locus tag: Avi_8099
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010974888.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MSRKSEGTRTDVYARITDRIVADLEKGVRPWVQPWNAGNLSGWVSRPLRHNGQRYTGLNVLLLWSETIANGFMSASWMTLRQANELGGHVRKGESGATVVYASRFTKTEKGAGGDAVERDIPFLKAYTVFNCDQIDGLPDHFYRRPEPVIKPLERIAHADRFFANTGAVICYGGGQAFYQPSADTIQMPAFETFRDAESYYAVLGHEVTHWVGATHRLNRDLSRYHKDRTDRAREELCADIGASFLCADLGIVPELEPRPDHASYVASWLKLLEGDRRAIFQAAAHAQRAVAYLHALQPQADTEREAA
SIO_010081: AVI_RS24800
subclass of: SO_0000673
so part of: AVI_RS24800
location: 71614..72540
location: region:71614-72540:1
so has part: feature:71614-72540:1:exon

WP_012648960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71614-72540:1:exon

AVI_RS31590
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31590
old locus tag: Avi_8103
pseudo: true
so part of: sequence
location: complement(73428..>73553)
location: region:73428-73553:-1
so has part: feature:73428-73553:-1:exon
subclass of: SO_0000010

position:73428:-1
position: 73428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73553:-1
position: 73553
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73428-73553:-1:exon

AVI_RS31590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31590
old locus tag: Avi_8103
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015931502.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: AVI_RS31590
subclass of: SO_0000673
so part of: AVI_RS31590
location: complement(73428..>73553)
location: region:73428-73553:-1
so has part: feature:73428-73553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73428-73553:-1:exon

AVI_RS29980
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS29980
old locus tag: Avi_8104
so part of: sequence
location: complement(73595..74658)
location: region:73595-74658:-1
so has part: feature:73595-74658:-1:exon
subclass of: SO_0000010

position:73595:-1
position: 73595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74658:-1
position: 74658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73595-74658:-1:exon

AVI_RS29980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS29980
old locus tag: Avi_8104
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012553005.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MGQAIGLREDFDGASLRRLARLSKSAPQARRLLALAQIYEGSSRSEAARIGGVTLQIVRDWVIRFNARGPDGLLDGKAPGKPSILNDAQRRALVEAVERGPIPAIHGVVRWRLIDLVYLLHEEFAVSLDETTVSRELKKLGYVKLTARPRHHAQNELAMETFKKGFAAEVAKVRTSLPKGTSIEVWFQDEARVGQKNTITRRWARRGTRPSAPKDQRTKSAYIFGAICPEQGKGAGLILPFCNTETMSLHLAEIALAVAPGAHAVVLMDQAGWHMTDKLEVPDNISIIALPAKCPELNPVENVWQFMRDNWLSNRVFTSHDNILDHCCEAWNKLVDQPWRIMTIGRRKWARQF
SIO_010081: AVI_RS29980
subclass of: SO_0000673
so part of: AVI_RS29980
location: complement(join(73595..74164,74167..74658))
location: region:73595-74658:-1
so has part: feature:74167-74658:-1:exon
so has part: feature:73595-74164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74167-74658:-1:exon

position:74167:-1
position: 74167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73595-74164:-1:exon

position:74164:-1
position: 74164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AVI_RS24815
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24815
old locus tag: Avi_8105
so part of: sequence
location: complement(74734..75630)
location: region:74734-75630:-1
so has part: feature:74734-75630:-1:exon
subclass of: SO_0000010

position:74734:-1
position: 74734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75630:-1
position: 75630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74734-75630:-1:exon

AVI_RS24815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24815
old locus tag: Avi_8105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006966602.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MSRLTIGIDLAKNVFQVHGIDDSNRVVIAQKLRRAHLLAFFAKLEPSLIGMEACGSAHHWARELTGMGHEVKLMAPAYVKPYVKRGKNDMVDAEAICEAVTRPTMRFVPIKTVSQQSILMVHKSRALLIRQRTMLVNALRGHLTEIGMVAPVGIERTAELVERVLAHKPTELDVPPLVTDIVVSLARQIDSLTAEVRTLEAKIREWQRTSEAGRRLATIPGVGVITATALAATVPDASVFRSGREFAAWLGLTPRSNSSGGKERLGRITKAGNRYLRTLLIVGATAVLRHVRHNTSLR
SIO_010081: AVI_RS24815
subclass of: SO_0000673
so part of: AVI_RS24815
location: complement(74734..75630)
location: region:74734-75630:-1
so has part: feature:74734-75630:-1:exon

WP_012648962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74734-75630:-1:exon

AVI_RS24820
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24820
old locus tag: Avi_8106
pseudo: true
so part of: sequence
location: 76032..76999
location: region:76032-76999:1
so has part: feature:76032-76999:1:exon
subclass of: SO_0000010

position:76032:1
position: 76032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76999:1
position: 76999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76032-76999:1:exon

AVI_RS24820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24820
old locus tag: Avi_8106
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010409169.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: AVI_RS24820
subclass of: SO_0000673
so part of: AVI_RS24820
location: 76032..76999
location: region:76032-76999:1
so has part: feature:76032-76999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76032-76999:1:exon

AVI_RS29990
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS29990
pseudo: true
so part of: sequence
location: 77554..>77712
location: region:77554-77712:1
so has part: feature:77554-77712:1:exon
subclass of: SO_0000010

position:77554:1
position: 77554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77712:1
position: 77712
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77554-77712:1:exon

AVI_RS29990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS29990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007792533.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF736 family protein
SIO_010081: AVI_RS29990
subclass of: SO_0000673
so part of: AVI_RS29990
location: 77554..>77712
location: region:77554-77712:1
so has part: feature:77554-77712:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77554-77712:1:exon

AVI_RS24835
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24835
old locus tag: Avi_8111
so part of: sequence
location: complement(77849..78151)
location: region:77849-78151:-1
so has part: feature:77849-78151:-1:exon
subclass of: SO_0000010

position:77849:-1
position: 77849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78151:-1
position: 78151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77849-78151:-1:exon

AVI_RS24835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24835
old locus tag: Avi_8111
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803058.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF736 domain-containing protein
translation: MSQIGSFTLSNDGTYTGTIKTLAIDAKARLVPSDPAATSDKAPDLRVIVSGVEIGAAWRRTSKEDRTYHSAKLDDPSFSAPIYANLFEGDDGKYALIWSR
SIO_010081: AVI_RS24835
subclass of: SO_0000673
so part of: AVI_RS24835
location: complement(77849..78151)
location: region:77849-78151:-1
so has part: feature:77849-78151:-1:exon

WP_012648963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77849-78151:-1:exon

AVI_RS30765
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS30765
so part of: sequence
location: complement(78117..78455)
location: region:78117-78455:-1
so has part: feature:78117-78455:-1:exon
subclass of: SO_0000010

position:78117:-1
position: 78117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78455:-1
position: 78455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78117-78455:-1:exon

AVI_RS30765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS30765
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQCANARLWVVLPGAVMPFDRRALFWADLPRDAVCDPACSPQQRSGDLLPRGGAAPRPTTRSLRAVLRMRCGLTVRVGRPRALDRHKAAMVAGLNTAQEFHHVPDRFVHPQQ
SIO_010081: AVI_RS30765
subclass of: SO_0000673
so part of: AVI_RS30765
location: complement(78117..78455)
location: region:78117-78455:-1
so has part: feature:78117-78455:-1:exon

WP_143050364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78117-78455:-1:exon

AVI_RS24840
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24840
old locus tag: Avi_8114
so part of: sequence
location: 78540..79766
location: region:78540-79766:1
so has part: feature:78540-79766:1:exon
subclass of: SO_0000010

position:78540:1
position: 78540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79766:1
position: 79766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78540-79766:1:exon

AVI_RS24840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24840
old locus tag: Avi_8114
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008495648.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MPTGVYVRKNAVGDRLKAGMAADHAADFAQWLRERRYTPRTIIEKMRLLASWTHWACAENYTLAAIREAHATSFALIAAGQCPRFRGDINQDAVEIAKLFIAYLEDRSVLVGPPAKPVAPLVAEFAAWAREQRGLAETTLATYLGTITPFIDTLGDTPAIYDAATIRAYMIERAKAVSVARMKGISVGIRAFLRFLIATGRCRPGLDHAMPNVAGWRLASIPRFLPDADIARIIGACNGERRLRDRAIILLLVRLGLRASEVARLGFGDIDWRQGSIRLFGKGRREELLPLTQEIGDALLAYIERGRPALAVPSLFITEYAPLRPIDRITVKCLVKRALKRGGVESHYKGAHILRHSAATAMLRHGVSLAHVGTVLRHRSPEMTAHYAKVDIALLSAIAQSWPGRSPC
SIO_010081: AVI_RS24840
subclass of: SO_0000673
so part of: AVI_RS24840
location: 78540..79766
location: region:78540-79766:1
so has part: feature:78540-79766:1:exon

WP_012648964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78540-79766:1:exon

AVI_RS24845
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24845
old locus tag: Avi_8115
so part of: sequence
location: 79760..80680
location: region:79760-80680:1
so has part: feature:79760-80680:1:exon
subclass of: SO_0000010

position:79760:1
position: 79760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80680:1
position: 80680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79760-80680:1:exon

AVI_RS24845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24845
old locus tag: Avi_8115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010518233.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MLTDDADRYIALRRSLGFKLAKTSRHLAAFACYAVDHGDIHVRHETAIAWAATVSSTPRSHQRRLGEIALFARFLHAEDRAHEVPHHHPDPGAAKRPAPYIYTSAELARMLDAAGNLRHQKPSPLRRHIYVMLVGLLASTGLRISEALNLRLDDALPDGVLHIRQTKFNKSRLVPMHASVVEALRAYLEVRRRFAGADDHVFLSVDAKPMPLRTVESTFHVILRKAGVGQDRSRRPRIHDLRHTFATRALEQCAMRRDDVARDFVALSTYLGHASIRHTYWYLEATPDLMGDIAAAAEALIEGEIA
SIO_010081: AVI_RS24845
subclass of: SO_0000673
so part of: AVI_RS24845
location: 79760..80680
location: region:79760-80680:1
so has part: feature:79760-80680:1:exon

WP_041699479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79760-80680:1:exon

AVI_RS24850
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24850
old locus tag: Avi_8116
so part of: sequence
location: 80677..81684
location: region:80677-81684:1
so has part: feature:80677-81684:1:exon
subclass of: SO_0000010

position:80677:1
position: 80677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81684:1
position: 81684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80677-81684:1:exon

AVI_RS24850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24850
old locus tag: Avi_8116
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008840746.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MTPIAPLITRFMREHMPQQRGYSPHSCEAYAYSFRLLFVFAAGRLHTRPSLLHLEQIDADMVLAFLHHIEHDRGNGASTRNLRLAAIKAFMRYVELRHPNALEQIAQINAIPGKRHDHKLIRHLTMDEVRAVLDAPDIKTRLGLRDRAMLHLCFAGGLRVSELVGLTLENVTLQPSPSILVFGKGRRERSLPLWKETARDVRAWLAVRGKPPVTELFVNAQGMAMTRAGFEYILEKHAKAAAARCPTLIGRPLSPHLLRHSCAVLMLQATRDIRKVALWLGHADIRTTEVYLRMDPSEKLEAIEAVLPPALRRGRFRAPDALIASLMADAHTAST
SIO_010081: AVI_RS24850
subclass of: SO_0000673
so part of: AVI_RS24850
location: 80677..81684
location: region:80677-81684:1
so has part: feature:80677-81684:1:exon

WP_012648966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80677-81684:1:exon

AVI_RS30770
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS30770
so part of: sequence
location: 81758..82048
location: region:81758-82048:1
so has part: feature:81758-82048:1:exon
subclass of: SO_0000010

position:81758:1
position: 81758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82048:1
position: 82048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81758-82048:1:exon

AVI_RS30770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS30770
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPFDRRALFWADLPRDAVCDPACSPQQRSGDLLPRGGAAPRPTTRSLRAVLRMRCGLTVRVGRPRALDRHKAAMVAGLNTAQEFHHVPDRFVHPQQ
SIO_010081: AVI_RS30770
subclass of: SO_0000673
so part of: AVI_RS30770
location: 81758..82048
location: region:81758-82048:1
so has part: feature:81758-82048:1:exon

WP_139192342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81758-82048:1:exon

AVI_RS24855
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24855
old locus tag: Avi_8119
so part of: sequence
location: 82014..82316
location: region:82014-82316:1
so has part: feature:82014-82316:1:exon
subclass of: SO_0000010

position:82014:1
position: 82014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82316:1
position: 82316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82014-82316:1:exon

AVI_RS24855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24855
old locus tag: Avi_8119
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803058.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF736 domain-containing protein
translation: MSQIGSFTLSNDGTYTGTIKTLAIDAKARLVPSDPAATSDKAPDLRVIVSGVEIGAAWRRTSKEDRTYHSAKLDDPSFSAPIYANLFEGDDGKYALIWSR
SIO_010081: AVI_RS24855
subclass of: SO_0000673
so part of: AVI_RS24855
location: 82014..82316
location: region:82014-82316:1
so has part: feature:82014-82316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82014-82316:1:exon

AVI_RS24860
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24860
old locus tag: Avi_8120
pseudo: true
so part of: sequence
location: <82484..82654
location: region:82484-82654:1
so has part: feature:82484-82654:1:exon
subclass of: SO_0000010

position:82484:1
position: 82484
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:82654:1
position: 82654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82484-82654:1:exon

AVI_RS24860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24860
old locus tag: Avi_8120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007792533.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF736 domain-containing protein
SIO_010081: AVI_RS24860
subclass of: SO_0000673
so part of: AVI_RS24860
location: <82484..82654
location: region:82484-82654:1
so has part: feature:82484-82654:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82484-82654:1:exon

AVI_RS24865
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24865
old locus tag: Avi_8121
pseudo: true
so part of: sequence
location: 82794..83101
location: region:82794-83101:1
so has part: feature:82794-83101:1:exon
subclass of: SO_0000010

position:82794:1
position: 82794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83101:1
position: 83101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82794-83101:1:exon

AVI_RS24865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24865
old locus tag: Avi_8121
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477327.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF736 domain-containing protein
SIO_010081: AVI_RS24865
subclass of: SO_0000673
so part of: AVI_RS24865
location: 82794..83101
location: region:82794-83101:1
so has part: feature:82794-83101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82794-83101:1:exon

AVI_RS24870
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24870
old locus tag: Avi_8123
so part of: sequence
location: complement(83145..83423)
location: region:83145-83423:-1
so has part: feature:83145-83423:-1:exon
subclass of: SO_0000010

position:83145:-1
position: 83145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83423:-1
position: 83423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83145-83423:-1:exon

AVI_RS24870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24870
old locus tag: Avi_8123
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003518435.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MTTTNEIADKIAADNGLTKVQAKGIVEAVFQAIADAAGSDAETSIPGFGKFKVKASPEREGRNPATGEKMTVAASKKLTFAPAKALKDALNK
SIO_010081: AVI_RS24870
subclass of: SO_0000673
so part of: AVI_RS24870
location: complement(83145..83423)
location: region:83145-83423:-1
so has part: feature:83145-83423:-1:exon

WP_012648969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83145-83423:-1:exon

AVI_RS24875
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24875
old locus tag: Avi_8126
so part of: sequence
location: complement(83507..83791)
location: region:83507-83791:-1
so has part: feature:83507-83791:-1:exon
subclass of: SO_0000010

position:83507:-1
position: 83507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83791:-1
position: 83791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83507-83791:-1:exon

AVI_RS24875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24875
old locus tag: Avi_8126
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006315297.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MRDSAGMITQPYHLYVERIAPEKNMARFYALAVQPTLFGEVSLVRAWGRIGTRGQQMVHLFDNESQAINLFLDVLCEKRKRGYRPKAPVDIQRI
SIO_010081: AVI_RS24875
subclass of: SO_0000673
so part of: AVI_RS24875
location: complement(83507..83791)
location: region:83507-83791:-1
so has part: feature:83507-83791:-1:exon

WP_041699482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83507-83791:-1:exon

AVI_RS24880
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24880
old locus tag: Avi_8127
so part of: sequence
location: complement(83870..84310)
location: region:83870-84310:-1
so has part: feature:83870-84310:-1:exon
subclass of: SO_0000010

position:83870:-1
position: 83870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84310:-1
position: 84310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83870-84310:-1:exon

AVI_RS24880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24880
old locus tag: Avi_8127
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006315298.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thermonuclease family protein
translation: MTLRLFTAVASLSPLAIGILASVASAPPSSASEAFSICGSGQRITCVVDGDTFWFRGEKIRIADIDTPELSPPRCERERERGLAAKQRLLEILNSGPVSFKTTARDEDRLGRKLRIVYRERRSVGDILVAEGLARKWEGSRRSWCG
SIO_010081: AVI_RS24880
subclass of: SO_0000673
so part of: AVI_RS24880
location: complement(83870..84310)
location: region:83870-84310:-1
so has part: feature:83870-84310:-1:exon

WP_012648971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83870-84310:-1:exon

AVI_RS24885
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: traG
locus tag: AVI_RS24885
old locus tag: Avi_8128
so part of: sequence
location: complement(84307..86271)
location: region:84307-86271:-1
so has part: feature:84307-86271:-1:exon
subclass of: SO_0000010

position:84307:-1
position: 84307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86271:-1
position: 86271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84307-86271:-1:exon

AVI_RS24885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: traG
locus tag: AVI_RS24885
old locus tag: Avi_8128
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003518438.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer system protein TraG
translation: MTASKVFLAVIPAAMMIVVLVFMAGIEHWLAALSKTGQAKLMLGRIGLALPYATAAAIGTLFLFASNGAAGVKAAGWGVVSGSGVVVAIAVLREGVRLSGITGEVPAGQSVFGYADPATMLGASTTFLAGVFALRVAMKGNAAFAKAAPRRIGGKRAVHGEADWMKVQEAARLFPDPGGIVVGERYRVDSVAAVSFRADDPLTWGAGGKSPLLCFDGSFGSSHGIVFAGSGGFKTTSVTVPTALKWGGGLVVLDPSSEVAPMASEHRRKAGRKVIILDPSASGVGFNALDWIGRHGSTKEEDIVAVATWIMTDNPRSASARDDFFRASAMQLLTALIADVCLSGHTDEEDQTLRRVRTNLSEPEPQLRARLTKIYEQSESDFVKENVSVFVNMTPETFSGVYANAVKETHWLSYPNYAALVSGDSFSTDDLADGGTDIFIALDLKVLEAHPGLARVVIGSLLNAIYNRNGDVKGRALFLLDEVARLGYLRILETARDAGRKYGITLTMIFQSIGQMREAYGGRDATSKWFESASWISFAAINDPDTADYISKRCGDTTVEVDQTNRSSGMKGSSRSRSRQLSRRPLILPHEVLRMRADEQIVFTSGNPPLRCGRAIWFRRKDMSASVGENRFHKQIADGVKSYKAAGMTDTEET
SIO_010081: AVI_RS24885
subclass of: SO_0000673
so part of: AVI_RS24885
location: complement(84307..86271)
location: region:84307-86271:-1
so has part: feature:84307-86271:-1:exon

WP_012648972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84307-86271:-1:exon

AVI_RS24890
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: traD
locus tag: AVI_RS24890
old locus tag: Avi_8129
so part of: sequence
location: complement(86258..86473)
location: region:86258-86473:-1
so has part: feature:86258-86473:-1:exon
subclass of: SO_0000010

position:86258:-1
position: 86258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86473:-1
position: 86473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86258-86473:-1:exon

AVI_RS24890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: traD
locus tag: AVI_RS24890
old locus tag: Avi_8129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020046837.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system coupling protein TraD
translation: MARTITNDARKKDTREKIELGGLIVKAGLRYEKRALLLGLLIDAGRRLKGNDGEQSRLTAIGAEAFAHDGE
SIO_010081: AVI_RS24890
subclass of: SO_0000673
so part of: AVI_RS24890
location: complement(86258..86473)
location: region:86258-86473:-1
so has part: feature:86258-86473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86258-86473:-1:exon

AVI_RS24895
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24895
old locus tag: Avi_8130
so part of: sequence
location: complement(86478..86774)
location: region:86478-86774:-1
so has part: feature:86478-86774:-1:exon
subclass of: SO_0000010

position:86478:-1
position: 86478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86774:-1
position: 86774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86478-86774:-1:exon

AVI_RS24895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24895
old locus tag: Avi_8130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007637593.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraC family protein
translation: MKKPSLKIREEIARLQDQLRQAETREAERVGRIALKAGLGEIEIEETELQAAFEEITGRFRGGKAASTGKRNAGDGRTAGETVTTIETGAAASSGREA
SIO_010081: AVI_RS24895
subclass of: SO_0000673
so part of: AVI_RS24895
location: complement(86478..86774)
location: region:86478-86774:-1
so has part: feature:86478-86774:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86478-86774:-1:exon

AVI_RS24900
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: traA
locus tag: AVI_RS24900
old locus tag: Avi_8131
so part of: sequence
location: 87030..90332
location: region:87030-90332:1
so has part: feature:87030-90332:1:exon
subclass of: SO_0000010

position:87030:1
position: 87030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90332:1
position: 90332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87030-90332:1:exon

AVI_RS24900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: traA
locus tag: AVI_RS24900
old locus tag: Avi_8131
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523838.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
translation: MAIAHFSASIVSRGDGRSVVLSAAYRHCAKMEYEREASTIDYTRKQGLLHEEFMLPADAPKWAKALIADRSVSGAVEAFWNKVEAFEKRSDAQLARDLTIALPLELTPEQNIALVRDFVEKHILGKGMVADWVYHDNPGNPHIHLMTTLRPLTEDGFGAKKVAVIGEDGQLVRTKSGKILYELWAGSTDDFNALRDGWFERLNHHLALGGIDLRIDGRSYKKQAIELEPTIHLGVGAKAIARKAEQQGVRPELERIELNEERRSENTRRILKNPAIVLDLIMREKSVFDERDVAKVLHRYVDDPAVFQQLMLRIILNPEVLRLQRDTIEFATGEKVPARYSTRAMIRLEATMARQAMWLSDKETHAVSTVVLAATFGRHGRLSEEQKAAIECIAGPARIAAVVGRAGAGKTTMMKAAREAWELAGYRVVGGALAGKAAEGLEKEAGIESRTLSSWELRWNRGRDVLDNKTVFVMDEAGMVASKQMAGFVDAVVRAGAKIVLVGDPEQLQPIEAGAAFRAIVDRIGYAELETIYRQREDWMRKASLDLARGNVEKALTAYNSNARITGERLKAEAVERLIADWNHDYDQTKTTLILAHLRRDVRMLNVMAREKLVERGLVGEGHVFKTADGIRQFDTGDQIVFLKNETSLGVKNGMIGHVVEAAPNRIVAVTGEGEHRRHVVVEQHFYSNLDHGYATTIHKSQGATVDRMKVLASLSLDRHLTYVAMTRHREDLQLYYGQRSFAFNGGLAKVLSRRNAKETTLDYERGKLYREALRFAENRGLHIVQVAQTLLRDRLDWTLRQKAKLADLAERLGAFAERLGLNQSLKAQTVKEAAPMVAGIKTFSGSVADTVGDRLGAEPALRQQWEEVSARFRYVFADPETAFRSMNFDAVLADRQAAKQILQKLEAEPTSIGPLKGKTGILASKAEREDRRIAEVNVPALKRDLEQYLRMRETAAQRLQTEEQVMRQRVSIDIPALSPEARVVLERVRDAIDRNDLPAAMAYALSNRETKLEIDGFNQDVTERFGERVLLSNAAREPSGKLYEKLAEGMKPEQKEQLKQAWPVMRTAQQLAAHERTVQSLKLAEEQRLTQRQTPVLKQ
SIO_010081: AVI_RS24900
subclass of: SO_0000673
so part of: AVI_RS24900
location: 87030..90332
location: region:87030-90332:1
so has part: feature:87030-90332:1:exon

WP_012648973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87030-90332:1:exon

AVI_RS24905
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: traF
locus tag: AVI_RS24905
old locus tag: Avi_8132
so part of: sequence
location: 90329..90859
location: region:90329-90859:1
so has part: feature:90329-90859:1:exon
subclass of: SO_0000010

position:90329:1
position: 90329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90859:1
position: 90859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90329-90859:1:exon

AVI_RS24905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: traF
locus tag: AVI_RS24905
old locus tag: Avi_8132
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003508820.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0008233 - peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transfer signal peptidase TraF
translation: MRRRRVLLLLTGAGVLMSGLVSIAFLGGYRLNLTTSEPLGLWRIDALHRPVAIGDLVFICPPETSAIEQARVRGYLRRGLCDDGFAPLIKTIAALPGQHVDIAGHVAIDGRSLPASTVRDRDGEGRPLTPDPGGIVPPHHLFLHSSFASSYDSRYFGPVPDSGLLGLAQPVITFDP
SIO_010081: AVI_RS24905
subclass of: SO_0000673
so part of: AVI_RS24905
location: 90329..90859
location: region:90329-90859:1
so has part: feature:90329-90859:1:exon

WP_012648974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90329-90859:1:exon

AVI_RS24910
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24910
old locus tag: Avi_8133
pseudo: true
so part of: sequence
location: 90903..92077
location: region:90903-92077:1
so has part: feature:90903-92077:1:exon
subclass of: SO_0000010

position:90903:1
position: 90903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92077:1
position: 92077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90903-92077:1:exon

AVI_RS24910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24910
old locus tag: Avi_8133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006315304.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: conjugal transfer protein TraB
SIO_010081: AVI_RS24910
subclass of: SO_0000673
so part of: AVI_RS24910
location: 90903..92077
location: region:90903-92077:1
so has part: feature:90903-92077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90903-92077:1:exon

AVI_RS24915
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24915
old locus tag: Avi_8135
so part of: sequence
location: 92094..92723
location: region:92094-92723:1
so has part: feature:92094-92723:1:exon
subclass of: SO_0000010

position:92094:1
position: 92094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92723:1
position: 92723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92094-92723:1:exon

AVI_RS24915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24915
old locus tag: Avi_8135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012654911.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraH family protein
translation: MVDAALIKQCADPALKPAIVEQFIARVGSQDPLAITVRSGSRVVLVPKPMTPEEALVLIRDNLGRNTVRVGITQYPAGLGIVEAGQLKPDLVDACENIRMGTALFAKVWRIVMKWYGNPTAADVLPQVMDDSIIAWQTGYFEGTAVFRAEDPGEGKISQPATIQSDEAEASARSRENPGDEAPSPEDVSSDPNKAGIRIDLSGIGARER
SIO_010081: AVI_RS24915
subclass of: SO_0000673
so part of: AVI_RS24915
location: 92094..92723
location: region:92094-92723:1
so has part: feature:92094-92723:1:exon

WP_012648975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92094-92723:1:exon

AVI_RS24920
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24920
old locus tag: Avi_8136
so part of: sequence
location: 92867..93325
location: region:92867-93325:1
so has part: feature:92867-93325:1:exon
subclass of: SO_0000010

position:92867:1
position: 92867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93325:1
position: 93325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92867-93325:1:exon

AVI_RS24920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24920
old locus tag: Avi_8136
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWSEMPIGKYKGKTLPQLLLSDPDYFFWAMEQDDFFRGGLAKQASDIFRKVRRIKIPKPDPANWRVEYFLTPDGKFAHFDIVEADRAPYVGSSRTSRSPTLDFAYVRQTRDYDKLGYKHFIKSFKYFYFGSSDVRLNKAKCEAFFDNPANFS
SIO_010081: AVI_RS24920
subclass of: SO_0000673
so part of: AVI_RS24920
location: 92867..93325
location: region:92867-93325:1
so has part: feature:92867-93325:1:exon

WP_041699486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92867-93325:1:exon

AVI_RS24925
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24925
old locus tag: Avi_8137
so part of: sequence
location: 93351..93785
location: region:93351-93785:1
so has part: feature:93351-93785:1:exon
subclass of: SO_0000010

position:93351:1
position: 93351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93785:1
position: 93785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93351-93785:1:exon

AVI_RS24925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24925
old locus tag: Avi_8137
inference: COORDINATES: protein motif:HMM:NF016255.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ProQ/FinO family protein
translation: MNDSNTKPLSPWKASRGPIKVDRYSLEAAKAVNALLNEPIAVLPSAEGETVLPFRIGINTDIERRLRPDAALSDLRKALRRYTHSAAYLYATAQPDALRHDIVGQPCEAVRDEDRLNARQSFLIVQERRKQRRQQRESENLAQN
SIO_010081: AVI_RS24925
subclass of: SO_0000673
so part of: AVI_RS24925
location: 93351..93785
location: region:93351-93785:1
so has part: feature:93351-93785:1:exon

WP_012648977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93351-93785:1:exon

AVI_RS24930
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24930
old locus tag: Avi_8138
so part of: sequence
location: 94123..94431
location: region:94123-94431:1
so has part: feature:94123-94431:1:exon
subclass of: SO_0000010

position:94123:1
position: 94123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94431:1
position: 94431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94123-94431:1:exon

AVI_RS24930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24930
old locus tag: Avi_8138
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523843.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional repressor TraM
translation: MELEDAAVTKKVELRPLIGLTHGLPPADLETITIDAIRTHRQLVEKADELFQALPETYKTGEEAGGPQHVRYIEASIEMHAQMSAVNTLISILGFIPKVVVN
SIO_010081: AVI_RS24930
subclass of: SO_0000673
so part of: AVI_RS24930
location: 94123..94431
location: region:94123-94431:1
so has part: feature:94123-94431:1:exon

WP_012648978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94123-94431:1:exon

AVI_RS31280
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31280
so part of: sequence
location: complement(94484..94642)
location: region:94484-94642:-1
so has part: feature:94484-94642:-1:exon
subclass of: SO_0000010

position:94484:-1
position: 94484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94642:-1
position: 94642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94484-94642:-1:exon

AVI_RS31280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAQDPEYSWKPIHLVKIEISAISTDAVLVLLNEGISSLVKNYEILERLDDKD
SIO_010081: AVI_RS31280
subclass of: SO_0000673
so part of: AVI_RS31280
location: complement(94484..94642)
location: region:94484-94642:-1
so has part: feature:94484-94642:-1:exon

WP_156762603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94484-94642:-1:exon

AVI_RS24935
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: traR
locus tag: AVI_RS24935
old locus tag: Avi_8140
so part of: sequence
location: complement(94839..95543)
location: region:94839-95543:-1
so has part: feature:94839-95543:-1:exon
subclass of: SO_0000010

position:94839:-1
position: 94839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95543:-1
position: 95543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94839-95543:-1:exon

AVI_RS24935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: traR
locus tag: AVI_RS24935
old locus tag: Avi_8140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012654946.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator TraR
translation: MQTWLEKLTDLAAIEGDECILKTGLADIADHFGFTGYAYLHIQHRHITAVTNYHPEWQSVYFDKKFDALDPVVKRARSRKHIFTWSGEHERPTLSKDERAFYAHAADFGIRSGITIPIKTANGSMSMFTLASEKPVIDLDREIDAVAAAGTIGQIHARISFLRTTPTAEDAAWLDPKEATYLRWIAVGKTMEEIADVEGVKYNSVRVKLREAMKRFDVRSKAHLTALAIRRKLI
SIO_010081: AVI_RS24935
subclass of: SO_0000673
so part of: AVI_RS24935
location: complement(94839..95543)
location: region:94839-95543:-1
so has part: feature:94839-95543:-1:exon

WP_041699488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94839-95543:-1:exon

AVI_RS24940
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24940
old locus tag: Avi_8142
pseudo: true
so part of: sequence
location: complement(<95907..96776)
location: region:95907-96776:-1
so has part: feature:95907-96776:-1:exon
subclass of: SO_0000010

position:95907:-1
position: 95907
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:96776:-1
position: 96776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95907-96776:-1:exon

AVI_RS24940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24940
old locus tag: Avi_8142
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018516949.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: alanine racemase
SIO_010081: AVI_RS24940
subclass of: SO_0000673
so part of: AVI_RS24940
location: complement(<95907..96776)
location: region:95907-96776:-1
so has part: feature:95907-96776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95907-96776:-1:exon

AVI_RS24945
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24945
old locus tag: Avi_8143
so part of: sequence
location: 96911..97372
location: region:96911-97372:1
so has part: feature:96911-97372:1:exon
subclass of: SO_0000010

position:96911:1
position: 96911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97372:1
position: 97372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96911-97372:1:exon

AVI_RS24945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24945
old locus tag: Avi_8143
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003562274.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lrp/AsnC family transcriptional regulator
translation: MSALDAIDRNILRLLRLDARSPNAKLATEVGLSPSACMRRIRIMEKSGIIRGYTALVDTSNVETAIAVIINITLERQTEEHLDRFEAAVRRHPEIRECFLMTGGSDYLLRVEVANAGEFERIHKEILSTLPGVLRIHSSFSIRNVLATKSKRR
SIO_010081: AVI_RS24945
subclass of: SO_0000673
so part of: AVI_RS24945
location: 96911..97372
location: region:96911-97372:1
so has part: feature:96911-97372:1:exon

WP_012648981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96911-97372:1:exon

AVI_RS31595
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31595
pseudo: true
so part of: sequence
location: complement(97400..>97701)
location: region:97400-97701:-1
so has part: feature:97400-97701:-1:exon
subclass of: SO_0000010

position:97400:-1
position: 97400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97701:-1
position: 97701
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97400-97701:-1:exon

AVI_RS31595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31595
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015342513.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AVI_RS31595
subclass of: SO_0000673
so part of: AVI_RS31595
location: complement(97400..>97701)
location: region:97400-97701:-1
so has part: feature:97400-97701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97400-97701:-1:exon

AVI_RS24955
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24955
old locus tag: Avi_8145
so part of: sequence
location: complement(97789..98604)
location: region:97789-98604:-1
so has part: feature:97789-98604:-1:exon
subclass of: SO_0000010

position:97789:-1
position: 97789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98604:-1
position: 98604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97789-98604:-1:exon

AVI_RS24955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24955
old locus tag: Avi_8145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007877398.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator
translation: MENHDASQSSLGKAVLLLKAIARSGAAGARLKDIAQGMDVSLPTVHRLLKTLISEGLVEQADKNYRLSYEFFCMAAKSRQMNSISEAARPSLLRVFGMLKEAVILIERSKFDAICTDCFWGSHPIRTFYGGVGGRVPLGVGQGALAILAFQPDEEREQIIRFNMPRIAAEYPIDELDLRTMINEIREMRAAAFDFNINDGISAIAVPIFDRAGIAVASLSIAAPLVRLSGPRQKTVIDLLTKEARVISKALNPLGQIDEPVIWGEAASKLT
SIO_010081: AVI_RS24955
subclass of: SO_0000673
so part of: AVI_RS24955
location: complement(97789..98604)
location: region:97789-98604:-1
so has part: feature:97789-98604:-1:exon

WP_012648982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97789-98604:-1:exon

AVI_RS24960
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24960
old locus tag: Avi_8146
so part of: sequence
location: 98782..99897
location: region:98782-99897:1
so has part: feature:98782-99897:1:exon
subclass of: SO_0000010

position:98782:1
position: 98782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99897:1
position: 99897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98782-99897:1:exon

AVI_RS24960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24960
old locus tag: Avi_8146
inference: COORDINATES: protein motif:HMM:NF024808.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MSENKGTMEARISRRNFNLLGLGSAAALVAMRAGPSWAAGEKITFYGYGGQSKKNMHEVVFTPFTQATGIEVVEGTFGDETEIITRLKSGGAGDLSVYSNAGFDMYKRYVDLGANSELNEDNIPNLKLVSQVLIEQMRKLTPNGKLSAIPYLYGTTGIAYNTKHVSREEAKKLGYKLLWDKRFSGKIALSNYALDRIWSAALYTGQDPNKLSDTNAIFAALREQRPLVKKYWESGSEVMDLLAKEEVVVAETWSTRAAALKKDNYPIEYLEPEQCQAWVQNLFVLKGAPMEPCEKLLDLMLKPEINFEYCMRTNNGSALDPRKTNFPDQLKNQPGFDPSGTFEGFNIPDGAYWAEQIDKLEPQWRRVARGA
SIO_010081: AVI_RS24960
subclass of: SO_0000673
so part of: AVI_RS24960
location: 98782..99897
location: region:98782-99897:1
so has part: feature:98782-99897:1:exon

WP_012648983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98782-99897:1:exon

AVI_RS24965
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24965
old locus tag: Avi_8147
so part of: sequence
location: 99979..101070
location: region:99979-101070:1
so has part: feature:99979-101070:1:exon
subclass of: SO_0000010

position:99979:1
position: 99979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101070:1
position: 101070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99979-101070:1:exon

AVI_RS24965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24965
old locus tag: Avi_8147
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019859480.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MLEFRSTTLRYGPVVAVNDINLVVETGAFVALLGPSGCGKTTLLRSVAGLAGNTTGEILINGRPVTDVPVHKRNIGLVFQNYALFPHKTVFDNIAFGLKYRGLPKADIKRQVTEALEMVRLPHTANRYPSQLSGGQQQRIAIARAIVTKPDVLLLDEPLSALDANLRADMRSEIRALQQATGITTVFVTHDQEEALAMADLVVVMKDGCVVQTGSPEEIYRTPKSRFVAEFIGHANLLKAKVVESTESSFLIDIGGVQTRLSGNVGAKVGDTIEAVVRSAHIKVGAAQQSANPALHLGKVIERTFLGDKTTYVIDLEGTRVAASAGDDSHPLQVGDLAELNFDPARITLLDADGQYLPIEGRS
SIO_010081: AVI_RS24965
subclass of: SO_0000673
so part of: AVI_RS24965
location: 99979..101070
location: region:99979-101070:1
so has part: feature:99979-101070:1:exon

WP_049777480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99979-101070:1:exon

AVI_RS24970
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24970
old locus tag: Avi_8148
so part of: sequence
location: 101072..101953
location: region:101072-101953:1
so has part: feature:101072-101953:1:exon
subclass of: SO_0000010

position:101072:1
position: 101072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101953:1
position: 101953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101072-101953:1:exon

AVI_RS24970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24970
old locus tag: Avi_8148
EC number: 7.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018719473.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MAVALSQKNDRLRILLLLAPAIILLLLLIVAPTATMIRYSFNTYIGGGRDASGLSLENWKMFFSDPYYFLGLWKTMRIAVEATVIAVFIAYPVAYTIAFSSRVWRPFLLILLVLPFWISFIIRNLAWINILGERGAINALLMGLGLTDSPLKFLYTEFSVILGILSFVLPYIILNIYVSLDGIDRNLLHAARTLGCTSWQAFLEITLPLSLPGLCSGVLLSLVLAAGTYITPALLGGPDNFMFGNIIADTISLELNWPMGAVLSLALTFLLLLLTAIYSRFLGIGSITKGLTR
SIO_010081: AVI_RS24970
subclass of: SO_0000673
so part of: AVI_RS24970
location: 101072..101953
location: region:101072-101953:1
so has part: feature:101072-101953:1:exon

WP_012648985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101072-101953:1:exon

AVI_RS24975
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24975
old locus tag: Avi_8149
so part of: sequence
location: 101950..102750
location: region:101950-102750:1
so has part: feature:101950-102750:1:exon
subclass of: SO_0000010

position:101950:1
position: 101950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102750:1
position: 102750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101950-102750:1:exon

AVI_RS24975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24975
old locus tag: Avi_8149
EC number: 7.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008891864.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MNADQPGVGWPLKIFTALVYMFLFGPVAAVILLSFNTADFASFPMQGVGLRWFAELFQNESVMRALKTSLVLGVLTAGICGVVGVLAAIALARYEFRGKRLMNVFLLTPLLVPETVLAVGLLLFMQLFKQPRSFSLLLMGHIMLALPYVVLVVHARLITIQKTFEEAAATLGANRLQVFREVTLPLLMPAVVAGLLLSFTLSFDNVTASIFWRPIGTETLPTEIYSMLRDSVSPEINALGTVMVAITIGLPLLGIAFFRIRSQRRL
SIO_010081: AVI_RS24975
subclass of: SO_0000673
so part of: AVI_RS24975
location: 101950..102750
location: region:101950-102750:1
so has part: feature:101950-102750:1:exon

WP_012648986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101950-102750:1:exon

AVI_RS24980
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24980
old locus tag: Avi_8150
so part of: sequence
location: 102871..104217
location: region:102871-104217:1
so has part: feature:102871-104217:1:exon
subclass of: SO_0000010

position:102871:1
position: 102871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104217:1
position: 104217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102871-104217:1:exon

AVI_RS24980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24980
old locus tag: Avi_8150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011242129.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate aminotransferase family protein
translation: MANETANSNSVQSFWRPFDTPSETLMDPPRRVASGDGVYVTDDGGRLLDAVGGLWNVNLGYSQPSITQAITKQLEELAYTSVFKGNTTGVAEELAQTLVDDWFGADGMARVFFTSGGSDSVETALRLARQYWKILGQNDRYKFISLKRSYHGTHFGGSSVSGGAHLRRNYEPLMPGCFHIPAPITYRNAFDETSPERLAQICVRLLEEEIIFQGPETVAAFIAEPVQGAGGIIVPHESFWPMVREVCDKYGVLLIADEVVTGFGRTGFDSGVRGWGVKPDMMILAKAITSGYFPFGATMIGEKVAQAFENTKGPVANVGHGYTNSGHPAGCAAGLATLKLTRELGVVENAGPLGERLMAGLQRMKDKHELVGDVRGRGLMAAVELVSDRSAKTPLGAEMMKRFVKATAANGVLVRQGGHMIILSPPLTIQASQIDEIVDAMDKGLSSL
SIO_010081: AVI_RS24980
subclass of: SO_0000673
so part of: AVI_RS24980
location: 102871..104217
location: region:102871-104217:1
so has part: feature:102871-104217:1:exon

WP_012648987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102871-104217:1:exon

AVI_RS24985
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24985
old locus tag: Avi_8152
so part of: sequence
location: 104697..105662
location: region:104697-105662:1
so has part: feature:104697-105662:1:exon
subclass of: SO_0000010

position:104697:1
position: 104697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105662:1
position: 105662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104697-105662:1:exon

AVI_RS24985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24985
old locus tag: Avi_8152
EC number: 7.-.-.-
inference: COORDINATES: protein motif:HMM:NF012738.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MIARQVTVFDRGLNATLDAKVAPSGPTYFKQGVREKMLNRRQELVTLFLLAPSLVMSVLLLVVPLLVVIAYSFAGRDAYGGAVTGFTLASYIELLQPTYLPIFVNSLQIAAVSTAVCLLIGYPIAYFIAFRAGRHAGLLLALLLIPFWIDFMIRMSSWMVLMGRNGTINGILSGIGMIDEPIRMIGTYPAVTVGMLYAFLPTTVLPIYAALSGINKRLLEAADDLGAGPIEAFWRVTFPLSLPGVMAAMLFVFVPAMGVYAIPVLLGGGKSIILGNLIVQLFLDFRNIPLGAAVSVVMLVVSSVIIVFYMRILRRVEEAHA
SIO_010081: AVI_RS24985
subclass of: SO_0000673
so part of: AVI_RS24985
location: 104697..105662
location: region:104697-105662:1
so has part: feature:104697-105662:1:exon

WP_139191477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104697-105662:1:exon

AVI_RS24990
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24990
old locus tag: Avi_8156
so part of: sequence
location: 105659..106453
location: region:105659-106453:1
so has part: feature:105659-106453:1:exon
subclass of: SO_0000010

position:105659:1
position: 105659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106453:1
position: 106453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105659-106453:1:exon

AVI_RS24990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24990
old locus tag: Avi_8156
EC number: 7.-.-.-
inference: COORDINATES: protein motif:HMM:NF012738.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MKLSRLAGFYVPVVTIFGYVFLFAPLLVLVIYSFNAGRSTVVWAGFSMDWYAQALNDRGLQRGLQVSAIVAVLSAVISTAIGTSAALAVIKRSFPAKNLFSTILIAPLVLPEIVLAVGLLVTTVWSGIALGYVTLVAGHVLVSVPFAFLIVRAAAAGLDPRLDEAAADLGANGAQTFMRVTLPLLMPAILSATLLSAVISFDNFVMSTFVSGVGTTPLPIQIYSMLKTGLTPKINALGTMLLAVNVLAILLVMGRYLKTIRSTG
SIO_010081: AVI_RS24990
subclass of: SO_0000673
so part of: AVI_RS24990
location: 105659..106453
location: region:105659-106453:1
so has part: feature:105659-106453:1:exon

WP_012648989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105659-106453:1:exon

AVI_RS24995
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS24995
old locus tag: Avi_8157
so part of: sequence
location: 106492..107529
location: region:106492-107529:1
so has part: feature:106492-107529:1:exon
subclass of: SO_0000010

position:106492:1
position: 106492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107529:1
position: 107529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106492-107529:1:exon

AVI_RS24995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS24995
old locus tag: Avi_8157
inference: COORDINATES: protein motif:HMM:NF024808.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spermidine/putrescine ABC transporter substrate-binding protein
translation: MLKYGLLIATTSLLLAGTALSATAEELHIYAWGGGEVPQEIVDDFAKETGIDVTMDTYDSNETMLAKLSAGASGYDLVEPTQNAVQVLAKQGLLLELDHSKLPNLGNLGATFKDVSYDPGLKFNVPYVWGTTGLAYNDDCVKQPVTSWKTLWDPQYQGRIFMLDNMLSAYIVALQVNGFHAGTSKPEEIEKATQSLIEQKKVLGGYNSSSFPELVSSGEACIVQAWNNNVSQVLTENPKVHYVIPDEGGSMWIDGFAIPKNAKNIEAAYKFMDYIMKPEVAAKAATLSKAATVIDAAKALLPKEVADNQAIYPAADKLKKVDFILDVGDAMKLYQDGWTKLKTAQ
SIO_010081: AVI_RS24995
subclass of: SO_0000673
so part of: AVI_RS24995
location: 106492..107529
location: region:106492-107529:1
so has part: feature:106492-107529:1:exon

WP_012648990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106492-107529:1:exon

AVI_RS25000
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25000
old locus tag: Avi_8158
so part of: sequence
location: 107614..108747
location: region:107614-108747:1
so has part: feature:107614-108747:1:exon
subclass of: SO_0000010

position:107614:1
position: 107614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108747:1
position: 108747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107614-108747:1:exon

AVI_RS25000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25000
old locus tag: Avi_8158
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006634414.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSNDEMSKPPKTRQTAVELVDVCKVFETSVTPPAYAVDHLSLKIASGEFFTFLGPSGCGKTTTLRMIAGFESPSAGEILLDGRDVSGLPAHLRNTNTVFQSYALFPHLSVEDNVAFGLSVKRVPRSERNDRVAAALDLVRMRHAAGRKPSQLSGGQQQRIALARALVNEPSVLLLDEPFGALDLKLRREMQIEVKEMQRRLGITFIFVTHDQEEALTMSDRIAVMSAGVIQQVDDPVGIYERPADRFTASFIRDMNMLPAKVVERQDDVFEVLAAETRLKLKCTAGLVVNADCTVAMRPEALTFTRREADDVVFTGQIESDVYVGADRLYSIRLNGGAAIVARVRNTREQRLLRAGETVHMFCPGSAIHLLCDQDRR
SIO_010081: AVI_RS25000
subclass of: SO_0000673
so part of: AVI_RS25000
location: 107614..108747
location: region:107614-108747:1
so has part: feature:107614-108747:1:exon

WP_012648991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107614-108747:1:exon

AVI_RS25005
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25005
old locus tag: Avi_8160
so part of: sequence
location: 108866..110350
location: region:108866-110350:1
so has part: feature:108866-110350:1:exon
subclass of: SO_0000010

position:108866:1
position: 108866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110350:1
position: 110350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108866-110350:1:exon

AVI_RS25005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25005
old locus tag: Avi_8160
EC number: 1.2.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010967426.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent succinate-semialdehyde dehydrogenase
translation: MAISNSLLSRLKDPTLVTDKAFIAGQWQATGENGASFEVTNPSTGDVIAVLPDMTRVDAAGAIDAAFKAQKLWARKTGKERAAVLRRLFDMMVANADDLAVILTAEMGKPLTEAKGEILYGASYVEWFGEEAKRIYGDTIPGHQQDKRIIVLKQPIGVVASITPWNFPNAMLARKFAPAIAAGCSIVSKPASETPLSALALAVLAERAGLPAGLFNVVTSTKSADIGREFTENDKVRKLTFTGSTDVGKILMRQGAEQIMKLGLELGGNAPFIVFDDADLDAAVEGAMISKYRNNGQTCVCANRLYVQAGVYDAFAEKLAARVSTMKVGDGFEDGVMAGPLITEKAVAKVEEHIADALKKGGAIAVGGSRDVRGGLFFQPTVLTGVTSAMKVAKEETFGPVAPLFRFETEDDVVEMANDTEFGLASYFYAKDLSRVFRVAEALEYGMVGINTGLISTEVAPFGGIKQSGQGREGSKYGIDDYVEIKYLCVSIED
SIO_010081: AVI_RS25005
subclass of: SO_0000673
so part of: AVI_RS25005
location: 108866..110350
location: region:108866-110350:1
so has part: feature:108866-110350:1:exon

WP_012648992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108866-110350:1:exon

AVI_RS25010
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25010
old locus tag: Avi_8162
so part of: sequence
location: 110875..112443
location: region:110875-112443:1
so has part: feature:110875-112443:1:exon
subclass of: SO_0000010

position:110875:1
position: 110875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112443:1
position: 112443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110875-112443:1:exon

AVI_RS25010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25010
old locus tag: Avi_8162
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017269015.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MKNLKTGFGALVLASLLAGGVMGPSPAFAAKTTLTLGAAANDVGTLDPHYATSTSDRTLVAWIYGALVRFAPGSTDPATLEPDLAESWQSSDDKLVWTFKLRSDVKWQAGYGEVTADDVVFSLDKARDPKRSAFSADFAAFDKVDAVDPHTVRITLSRRVPNLLGLVTNYAGGFIVSKKAFEERKEGFARAPVGFGPFEVKSIVAGQNVSFVANKDYFRGAPKLSTLNYRFINNNASRDLAFVAGEIEAAAGLANKNWLQRTEPLPGAVIDVFYPAEVSLLHINITKPPFDDIRVREALAYAVNPQAVVEFKGARFTTRPTSVVPSNNLGYLKDAGVFPYDPAKAKALLKDAGFGDGLTFSMLSSQLPEYETTAQVLQGQVEDSGIHMQLQPVEHASWHQMIRKDLSPVVLYGAARFPIADIFLTQFYDSASIVGQPGAVTNFSHCNVADKQIREARTEIDPAKQIALWQEAQRLILKNVCAIPITETSQVWVHNQKLKWGFDLKGSMSLGPLVTEATHFED
SIO_010081: AVI_RS25010
subclass of: SO_0000673
so part of: AVI_RS25010
location: 110875..112443
location: region:110875-112443:1
so has part: feature:110875-112443:1:exon

WP_012648993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110875-112443:1:exon

AVI_RS25015
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25015
old locus tag: Avi_8163
so part of: sequence
location: complement(112588..113337)
location: region:112588-113337:-1
so has part: feature:112588-113337:-1:exon
subclass of: SO_0000010

position:112588:-1
position: 112588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113337:-1
position: 113337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112588-113337:-1:exon

AVI_RS25015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25015
old locus tag: Avi_8163
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017269020.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MKFSASSSNAERALDILLLLGEVGPEGYSLAEIASRIGTAKPAAHRTLAAMVSKGFAEPTERYGHYRLGTAVPMLARRQERLEPLVQRYRPGMTEFARRTGFNVYLLVQSGIDAICAEMISRSSRHQFAMGLGARVPMGVGAGSLALMSLLAENVVEQILDANAERYQAHPSIRPVDRDIIRNQVLEAKQRGYAVNQGFFFFGEGGVGLPRMASGMYEVNMAFSFNAPLDMMNDAWVEDQVGQLRECLP
SIO_010081: AVI_RS25015
subclass of: SO_0000673
so part of: AVI_RS25015
location: complement(112588..113337)
location: region:112588-113337:-1
so has part: feature:112588-113337:-1:exon

WP_012648994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112588-113337:-1:exon

AVI_RS25020
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25020
old locus tag: Avi_8165
so part of: sequence
location: complement(113659..115008)
location: region:113659-115008:-1
so has part: feature:113659-115008:-1:exon
subclass of: SO_0000010

position:113659:-1
position: 113659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115008:-1
position: 115008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113659-115008:-1:exon

AVI_RS25020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25020
old locus tag: Avi_8165
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019459224.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-binding oxidoreductase
translation: MDALSRDIPFKLVRVNSNDKLPEQADVVVIGGGIAGISAAYYLAKKGHSVAVIEKGAVAAEQSSRNWGWVRQQNRDERELPLAKWSLAAWQELSDEIGPDLSFVRRGLMYVTSSEKELAGWEKWVKMAGGYGVQSRMVSSAEIKAAATGSTTQWIGGVHSPTDGFAEPTMACSAIAKAAQRHGATIHQNCAARGIETQAGKIHSVVTENGSIRTSRVLCAAGAWTSMFFRWHGISFPQVGVRATAFATKPGAKVIEGGFSTPSFTFRPRAEGGYTVSIRGRAKVELTPQAFRYAQQFMPMFKARWSTSLSLGISRFAVTGPEALARWTLSSVSPFEKMRVLNPAPDAKTVELAMKALMESFPELSGIGVSHAWGSWIDSTPDAVATIGPVPQLPGLYVASGFSGHGFGVGPGAGRLAADQIINDDPIVDPTPLRFTRFSEHDVGAPAAM
SIO_010081: AVI_RS25020
subclass of: SO_0000673
so part of: AVI_RS25020
location: complement(113659..115008)
location: region:113659-115008:-1
so has part: feature:113659-115008:-1:exon

WP_080517079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113659-115008:-1:exon

AVI_RS25025
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25025
old locus tag: Avi_8166
so part of: sequence
location: complement(115013..115870)
location: region:115013-115870:-1
so has part: feature:115013-115870:-1:exon
subclass of: SO_0000010

position:115013:-1
position: 115013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115870:-1
position: 115870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115013-115870:-1:exon

AVI_RS25025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25025
old locus tag: Avi_8166
inference: COORDINATES: protein motif:HMM:NF016873.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-formylglutamate amidohydrolase
translation: MLMDVKSGVFTRVDPTVPAAPVLFETPRSGGKYPHDFRTVALLKDLQRSISMYVEECYLDVVDSGATWLFAEFPNIYIDLNRNELDIDPSQLTGEWPVALQPGPKTKTGIGLIPTVCAGTKPVYDAPLSVAEVASRIDNYYWPYHNEVTRLLKKFKAEHGVAYHLSCHSMPAMPSPSAPDAGQRRSDFDLGDRNGQTSGKDLLELATEVLRSFGYRVTHNAHFIGAEAVRKHGNPAENIHSLQIEMNRSLYMDEATSLRGKKLPEIQSHLKTLASRIADHARAKG
SIO_010081: AVI_RS25025
subclass of: SO_0000673
so part of: AVI_RS25025
location: complement(115013..115870)
location: region:115013-115870:-1
so has part: feature:115013-115870:-1:exon

WP_012648996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115013-115870:-1:exon

AVI_RS25030
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25030
old locus tag: Avi_8168
so part of: sequence
location: complement(115983..117338)
location: region:115983-117338:-1
so has part: feature:115983-117338:-1:exon
subclass of: SO_0000010

position:115983:-1
position: 115983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117338:-1
position: 117338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115983-117338:-1:exon

AVI_RS25030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25030
old locus tag: Avi_8168
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012092304.1
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MmgE/PrpD family protein
translation: MHAIEQLATFAATHPAGSLPQATKDICAILIADLLAATAAGLHSNLALAARRAAIASYGKGPSTVWMTDQSLSIAGAAMANAAAASALDIDDGHRGAAGHPGAGIIPAAIAVGQAIGTSDEDIFEAIAIGYDVALRVATARPTETIDSYASGRWVNFGVAAAVGRLLKLSPSQMANAIGIAGAEGPIGYKKGTSRYQGSTVKELIPPAVVAGLTAAFRAQAGATGPLDLLDNETLYTRSVLTGELGEHWWIGDCYLKPYACCRYMHGAVDAILELRRPDAPIKSLRIETFQRGTELSNERAPRSLEGAQYSYYFSCALAALRGRQALQPMDPASLRDPEILELSSRIEMVAHSDFNDSFPKGTPSRVIIDQGNGPESRTVLFPLGDVANPMSAEQVMEKFRLIGAESLTEDGRNTILVAISKLTTDGFTPLLSALADRAGQISSPRADEVA
SIO_010081: AVI_RS25030
subclass of: SO_0000673
so part of: AVI_RS25030
location: complement(115983..117338)
location: region:115983-117338:-1
so has part: feature:115983-117338:-1:exon

WP_012648997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115983-117338:-1:exon

AVI_RS25035
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25035
old locus tag: Avi_8169
so part of: sequence
location: complement(117493..118275)
location: region:117493-118275:-1
so has part: feature:117493-118275:-1:exon
subclass of: SO_0000010

position:117493:-1
position: 117493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118275:-1
position: 118275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117493-118275:-1:exon

AVI_RS25035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25035
old locus tag: Avi_8169
EC number: 7.-.-.-
inference: COORDINATES: protein motif:HMM:NF012738.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MTHILSRSLLVILFGLLLAPLLPAIVMSFSADNNLAFPPSGWSFRWYSAVLSNERFLAGLKLSVTLAIAATILSLAFGVAASYALVRSKIPFANSLIALFTAPLIVPSIILGLGLLLVFVQLKLNGSYFALVFTHTMIVTPFVIRILVTGLQTMPADIESAAASLGARPLTVFRRITLPTLTPSITGAALLSFLISFDEVAITLFLAGQSLSTLPVAIYRYTTERTDPQIAALSVLLILLSVSLMVLLERVIGLARAIGK
SIO_010081: AVI_RS25035
subclass of: SO_0000673
so part of: AVI_RS25035
location: complement(117493..118275)
location: region:117493-118275:-1
so has part: feature:117493-118275:-1:exon

WP_012648998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117493-118275:-1:exon

AVI_RS25040
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25040
old locus tag: Avi_8171
so part of: sequence
location: complement(118272..119141)
location: region:118272-119141:-1
so has part: feature:118272-119141:-1:exon
subclass of: SO_0000010

position:118272:-1
position: 118272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119141:-1
position: 119141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118272-119141:-1:exon

AVI_RS25040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25040
old locus tag: Avi_8171
EC number: 7.-.-.-
inference: COORDINATES: protein motif:HMM:NF012738.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MAHNDETTSAGAAVGWLLSLPMLLVIGFFFVLPILSVALISFYGSAEGGVLIPELGISAYEKFFTDPFSREIVIRSIILSLLVTLLACILTYPIALYLYRTTSRWKGTLVLLTVSPLLLSAVVRTYSWMLILRPLEDFIHWIGFANVRLVNDYPGVVIGLTHIMMPYMALCLLSGFGKIDPNVEDAASSLGATPARRFFRITLPLSLPGVTLGCILTFVLAISAFVTPALLGGGRVFLLPTEIFTQALEILDWPLASAMSMVLLGLFILTMGLIRVWDMRTRAKSGVLS
SIO_010081: AVI_RS25040
subclass of: SO_0000673
so part of: AVI_RS25040
location: complement(118272..119141)
location: region:118272-119141:-1
so has part: feature:118272-119141:-1:exon

WP_012648999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118272-119141:-1:exon

AVI_RS25045
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25045
old locus tag: Avi_8172
so part of: sequence
location: complement(119141..120235)
location: region:119141-120235:-1
so has part: feature:119141-120235:-1:exon
subclass of: SO_0000010

position:120235:-1
position: 120235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119141-120235:-1:exon

AVI_RS25045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25045
old locus tag: Avi_8172
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019015547.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MKSGAELSLQDLSKSYDDKKLVLNKLNITAAPGEIVSLLGPSGCGKSTALRIVAGLVGATSGRVMLAGKDVTSLPTYKRNIGLVFQNYALFPHMTVLDNVAFGLEMRNVNRKEARSRAGEILEMVRLGALGQRRPRQLSGGQQQRVALARALVIHPDLLLLDEPLSNLDAKLREQMQDEIRDLQQRLGTTAIFVTHDQSEAMAISDHVAIMNEGVIVQYGRPTEIYENPASSFVANFIGRVNSIDGISNADGDASQQIKTDTGLSIKLAKPSLKGPVQFLIRPSSIEVLPSSTPSEAGRNRVPASVRKVTYAGDIVSVACDTQGIAMTAEIPGSSSAWRSLEPGQQVTLDWPVASGFVFERKAN
SIO_010081: AVI_RS25045
subclass of: SO_0000673
so part of: AVI_RS25045
location: complement(119141..120235)
location: region:119141-120235:-1
so has part: feature:119141-120235:-1:exon

WP_012649000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119141-120235:-1:exon

AVI_RS25050
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25050
old locus tag: Avi_8173
so part of: sequence
location: complement(120250..121284)
location: region:120250-121284:-1
so has part: feature:120250-121284:-1:exon
subclass of: SO_0000010

position:120250:-1
position: 120250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121284:-1
position: 121284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120250-121284:-1:exon

AVI_RS25050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25050
old locus tag: Avi_8173
inference: COORDINATES: protein motif:HMM:NF024808.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: extracellular solute-binding protein
translation: MAFALPKYLAAIAAVLSVSSPCLADVNIIGYQSVFADNYRKAVIEPFEKKTGIKVIYNEINLSAQNLGRIRAEKNNPTLDLSIMDAMVSRAGNTEGIFDQVDLTKLSNGQNLFDEAYINKGFGPGITFDYPVLMYSNSLANPPKALADLAKPELKGQVAMWPAPEIAALMNTILLTRAAGGDEKKSVDQGVEKFAEIAKNVQTWAPAPDAYELVSNGTVKAGAGWNARAQFFAKDPKSNMSVVIPTEGSMFQINTLNLVKGAPNKEEALKFIDYALSPEAQAAFANLMFYSPTNKDAKPSQDALSKTASTPEIREKLKPLDWAFFVSKRESWLQEWRRKVITAN
SIO_010081: AVI_RS25050
subclass of: SO_0000673
so part of: AVI_RS25050
location: complement(120250..121284)
location: region:120250-121284:-1
so has part: feature:120250-121284:-1:exon

WP_012649001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120250-121284:-1:exon

AVI_RS25055
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25055
old locus tag: Avi_8174
so part of: sequence
location: complement(121315..123072)
location: region:121315-123072:-1
so has part: feature:121315-123072:-1:exon
subclass of: SO_0000010

position:121315:-1
position: 121315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123072:-1
position: 123072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121315-123072:-1:exon

AVI_RS25055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25055
old locus tag: Avi_8174
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003819907.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydantoinase B/oxoprolinase family protein
translation: MDTTTENTPAASVDPVTLEIVRNALTSIAERNAHRMIRASTSIIVKEMEDCSAAVFDGQGRLLAESATIPIHLNCTGVCLRTILEQYHPPETWRPGDIVITNDPYAGGASMSTAHTNDYVVFMPVFFEDLLVGFTGLMVHHQEIGAMNMATRGWNLEIWQEGLRVPPMKIGENGIVDERCMRIILNNTRLPDNMENDLFAQVASVAAAAEDMKAMFDRYGRETLLRCFEALIDYSEQRTRAEISQIPDGVYEHEELILDDGAKSGPYKLKLAIHKTGSDILFDFTGTDPQIRGPINAPLATTWAAIFYAMRCVTDPSIPSTEGNKRPFKVIAPEGTLVNAKKPAAVYQRMVVCHSLVDLVMGALSQIVPERVMGDSCGCLYNFTSARERDTGNPSVFGEVVPGGLGATSKADGIDVMSCHVTNCPIPPIEATEAECPVLYVQRELQSGTGGAGKWRGGVGQVLAYKVLGDLAELQHTSQKSVTLPQGVAGGFPGGGGRWVINEGTPNARVLEHSIGELEMLDYGDVVTHYTPGGGGFGNPLERDPALVLRDVRHGLVTREQAEKVYGVKVGVDLKEWTPTNDRAA
SIO_010081: AVI_RS25055
subclass of: SO_0000673
so part of: AVI_RS25055
location: complement(121315..123072)
location: region:121315-123072:-1
so has part: feature:121315-123072:-1:exon

WP_012649002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121315-123072:-1:exon

AVI_RS25060
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25060
old locus tag: Avi_8176
so part of: sequence
location: complement(123085..125130)
location: region:123085-125130:-1
so has part: feature:123085-125130:-1:exon
subclass of: SO_0000010

position:123085:-1
position: 123085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125130:-1
position: 125130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123085-125130:-1:exon

AVI_RS25060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25060
old locus tag: Avi_8176
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003819905.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydantoinase/oxoprolinase family protein
translation: MGIRIGSDTGGTHTDLVLLDDDQAKIVTLKVPTTPEDLSNGIAKGIETIVERAGSQMSEVDRFVYGTTLVTNLIVEEQQVDIGLITTGGFRDVLEIGRASRRPNVYDIHWRPPTALISRDLRVTVNERISADGSVITPIDDTDIAERLSELKSKGVRCVAVCLMNSYTNPEHEQRIGKVAAEKFPDLAISLSCEVAREFREYERTSTTAINAFVGGPLTRHLDGLAAALAAKGITPAPYIIRGNGGVMSFTSAKKLPAALTHSGPMGGIIGGAALAEKAGVNKIITLDMGGTSADVSLLTDGKAEMTTRSSVGRHPLLLPMLDLITIGAGGGSIAWVDQGGALRLGPRSAGSVPGPACYGQGGENPTVTDSNLYGGRLNPEYFLAGARKLHPAKSREAILRKVAEPCGISLDAAASGIMALAEAHMVNAIKLITVQRGLDPRDYTLVGFGGAGPLHTLRLAEELGIRSALIPPAPGNLSALGMLTAQVRHDLVRTKLAYLGEVDAAELSAGFDELIEQGEKALADEDIAAGTSQYVTSLDLRYKGQNFELNLELPAGDMQAALDALQARFAERHKQMYGYDNPGKPIQIVNMRVAAMSTKPDFVWPTFPTEAGGKATVVSRRKVLIDAGHWEELPIYRLDDLREGYIFPGASIVEYPGSTLFVPPGWTARCDAYRILHLER
SIO_010081: AVI_RS25060
subclass of: SO_0000673
so part of: AVI_RS25060
location: complement(123085..125130)
location: region:123085-125130:-1
so has part: feature:123085-125130:-1:exon

WP_012649003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123085-125130:-1:exon

AVI_RS25065
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25065
old locus tag: Avi_8178
so part of: sequence
location: 125585..126352
location: region:125585-126352:1
so has part: feature:125585-126352:1:exon
subclass of: SO_0000010

position:125585:1
position: 125585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126352:1
position: 126352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125585-126352:1:exon

AVI_RS25065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25065
old locus tag: Avi_8178
inference: COORDINATES: protein motif:HMM:NF013757.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator
translation: MSEKSVEGAQVIGKSIALLKFISAAGSDGAKVKDIAAALNMSVPTIYRLARAFEKNGWLERLDHKMSLRLGIELFALGVKAADAAGIRSIARPALVRISEEVGATVFLMCRNDHHVIVVDRVWAGQNISTLTDNVGSMVPMGVGAASIAIMSTLDQGDVEALTRANEPSYERYDLTRAVIAATVSDARERGYAETQSTLIAGLSALSIPVRNFNGVSTTALSVNLPTDFLTASRRTHIVELLKAEVDSIEKIVRS
SIO_010081: AVI_RS25065
subclass of: SO_0000673
so part of: AVI_RS25065
location: 125585..126352
location: region:125585-126352:1
so has part: feature:125585-126352:1:exon

WP_012649004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125585-126352:1:exon

AVI_RS25070
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25070
old locus tag: Avi_8180
so part of: sequence
location: 126581..127522
location: region:126581-127522:1
so has part: feature:126581-127522:1:exon
subclass of: SO_0000010

position:126581:1
position: 126581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127522:1
position: 127522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126581-127522:1:exon

AVI_RS25070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25070
old locus tag: Avi_8180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017269019.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MLLYLAKRMCFAVFTLISVLTLVFLMVRVLPGDPVQMILGDQASPESIAAMRTRLGLDQPLLVQYGHFLLNALKGDLGTSMVSGRPVTEEVMSVLPYTLELTFAGLSLGVVFGVPAGVWAAVYRNRPADYIIRFVSLLGLSLPGFVSAIVLLIAFAIKLRWFPVISAGTGEGIGDRLWQMVLPAVSLALIMMAYVTRVTRSAMLEVLSQDFVRTARAKGVHHSAVIWRHGLGNCLVPITTIVGLYLGILIGNSVLTEIVFSRPGLGKLILTALSQRDYTLLQGMIVVYTFIVVVVNLATDLTYGFLDPRVQYK
SIO_010081: AVI_RS25070
subclass of: SO_0000673
so part of: AVI_RS25070
location: 126581..127522
location: region:126581-127522:1
so has part: feature:126581-127522:1:exon

WP_012649005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126581-127522:1:exon

AVI_RS25075
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25075
old locus tag: Avi_8181
so part of: sequence
location: 127519..128400
location: region:127519-128400:1
so has part: feature:127519-128400:1:exon
subclass of: SO_0000010

position:127519:1
position: 127519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128400:1
position: 128400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127519-128400:1:exon

AVI_RS25075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25075
old locus tag: Avi_8181
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012092302.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MTSSNVTLKRSESRLEKTQAVIRRVNFSTWAGLLIVVLLVLGAIFAPQLSPYPPAKQNIVDQLASPSAAHIFGTDQFGRDIWTRMLYGARYSLIIGFLAVVVAMVIGTFIGMIAGFRGGRLDIVLMQIMDVVLAFPSLILGIALVALMGATTTNIVAAIAFTSIPAFARVARAAVITQRDREYVQACRAMGFSSNRTLYRHILPAILPEIMVMASLWMANAVRTEASLAFVGLGIAPPAPTWGGMVRDGFENILSSPHLALFPSLGILLLVLAFNLMGDGLRDLIDPRLKDAS
SIO_010081: AVI_RS25075
subclass of: SO_0000673
so part of: AVI_RS25075
location: 127519..128400
location: region:127519-128400:1
so has part: feature:127519-128400:1:exon

WP_012649006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127519-128400:1:exon

AVI_RS25080
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25080
old locus tag: Avi_8183
so part of: sequence
location: 128400..130190
location: region:128400-130190:1
so has part: feature:128400-130190:1:exon
subclass of: SO_0000010

position:130190:1
position: 130190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128400-130190:1:exon

AVI_RS25080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25080
old locus tag: Avi_8183
EC number: 7.4.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018095973.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dipeptide ABC transporter ATP-binding protein
translation: MSEHAVLSVKNLKISFGSKPIVHDLSFDIAAGSTLAVVGESGSGKSVTSLAIMGLLPEGTAKVSGSIRLNGKELLDLPEAEMRQIRGGKISMIFQEPMTSLNPVQRVGDQIAEAIRIHRGLKGRGLRDAVLEMLKKVGIPDPERRIDNYPHMFSGGMRQRVMIAMALACDPALIIADEPTTALDVTVQAQILQLLKDLQQDTKTAVLFITHDMGVVAEVADQVLVMRGGHQIEADSVNKIFTEPESEYTRILIEAAPSIAGKIDIENAAASELDVLPLNCKGDKPLLEVRDLSVRFVHTGGLLGRRLGHVHAVEGVSFAIGKGETLGLVGESGSGKSTIGKAIIDLVSRHGGTITVDGNVIDYSNPKSLARLRRDVQMIFQDPFGSLDSRQTIGSAIIEPMKVHGIATGKALTEKMEWLLDKVGISPDRAKSLPHEFSGGQRQRICIARALAMAPKLIIADEAVSALDVAVKAQIIELMMNLQKEFDISYLFISHDMAAVEKICDRVAVMYFGELVEIGSRDDVIGRPGHAYTQRLLSAIPITHPDQRLDRPAAKREAPPPRSPMKPIGFAPEPALWNMKSDGHFVRRTAPLLSPR
SIO_010081: AVI_RS25080
subclass of: SO_0000673
so part of: AVI_RS25080
location: 128400..130190
location: region:128400-130190:1
so has part: feature:128400-130190:1:exon

WP_012649007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128400-130190:1:exon

AVI_RS25085
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25085
old locus tag: Avi_8184
so part of: sequence
location: 130199..131530
location: region:130199-131530:1
so has part: feature:130199-131530:1:exon
subclass of: SO_0000010

position:130199:1
position: 130199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131530:1
position: 131530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130199-131530:1:exon

AVI_RS25085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25085
old locus tag: Avi_8184
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012648997.1
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MmgE/PrpD family protein
translation: MHAIQELANFAATLPAGSLPQSARQACAVLITDLLAASAAGFNSDLAIAARKAAYAAYGQGTADVWLTDRSLSIVGAAMANSAAASALDLDDGHRGAAGHPGAGIIPAVLAVAQQIGASDEEIFEAIAVGYDIALRVATARPTETIDTYISGRWVNFGVAVGAGRLLKLTTSQMANAIGIAGAEGPIGINEEVSKADGNTVKECIPPAVVTGLTAAFRAQAGATGPLDLLDDGKRYTRAVLTGDLGIHWWLEDCYLKPYACCRYMHAAIDAILELRRPSAPIVSLRIETFAEGLKLSNERNPAGLEGAQYSYHFSCALAAIHGGRALQPVDPVYLTDQAVLELSARTVLQAHPDFASSFPKGTPCRVIMDQGHGEEVLTVLHPLGDVANPMSYEQVKEKFEQLGSQVLDEERRARILAALDQLPVRGFKPLFDSLVALSNHSS
SIO_010081: AVI_RS25085
subclass of: SO_0000673
so part of: AVI_RS25085
location: 130199..131530
location: region:130199-131530:1
so has part: feature:130199-131530:1:exon

WP_012649008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130199-131530:1:exon

AVI_RS25090
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25090
old locus tag: Avi_8187
so part of: sequence
location: 131762..132874
location: region:131762-132874:1
so has part: feature:131762-132874:1:exon
subclass of: SO_0000010

position:131762:1
position: 131762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132874:1
position: 132874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131762-132874:1:exon

AVI_RS25090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25090
old locus tag: Avi_8187
inference: COORDINATES: protein motif:HMM:NF024989.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alcohol dehydrogenase
translation: MHEKAGRFDTRQSPQETTEEEMRAWLNKTHHSRLEAVEIATPDATGTQVVVDVTHCAVCHSDLHTWQGVTDYGSRGVLQRPQPETPIAMGHEIVGKVSALGPDAQGVKIGDQVIVYPWLGCGKCNDCLNGRDNICAIGSRSLGFMQHGGFADKVIVPHSKYLASTGNIDPALAATYACSGLTVRSAIRKIMPLAPEELVVVIGAGGLGLQAVAMLRALTNNKILVLDKSEAKRDLVLGEGADHFVVLADEDTAARVIEINGGKVSSVLDFVNNSETSGLALSILRKGGRTIQVGLYGGELVVPLYTLAVTGLSIIGSITGTPEDLKDVIRLAEEGVLKPIPLTRMAMAQVNEAMSRLEQGRVDGRIVLIN
SIO_010081: AVI_RS25090
subclass of: SO_0000673
so part of: AVI_RS25090
location: 131762..132874
location: region:131762-132874:1
so has part: feature:131762-132874:1:exon

WP_139191476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131762-132874:1:exon

AVI_RS25095
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25095
old locus tag: Avi_8188
so part of: sequence
location: 133034..134464
location: region:133034-134464:1
so has part: feature:133034-134464:1:exon
subclass of: SO_0000010

position:133034:1
position: 133034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134464:1
position: 134464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133034-134464:1:exon

AVI_RS25095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25095
old locus tag: Avi_8188
inference: COORDINATES: protein motif:HMM:NF012398.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde dehydrogenase family protein
translation: MAPRPSIYIDNTWQPATGGDTFWAVNPSTEEAFAEFQIASAEDVDRAVKAAKNALPAWSASEASMRVDALSRLLKAYVARTEDLARALAAEMGAPIDFARTSQIGAGANHLRAFIKALQEFHFAEPALVGSENQEILREAVGVAALITPWNWPLNQITLKVGAALAAGCTVVLKPSEVSPVSGQIFAEIVEAANLPKGVFNLVQGTGAVTGAAMVAHPDVDVVSFTGSTRAGIAISYAAAPSIKRVSLELGGKSPSIVFADADVEKAVRWTANFCFNNTGQSCNASTRMLVERSVYDRAVKLATEVAEGIVVERADLPGTHIGPLSSKVQYDKVLSCIDQAVSEGVNLITGGRGRPEHHKRGYFVSPTVFAGVTPEHSLFRDEVFGPVLAITPFDSEEEAIELANDTVYGLSAYIHTEDAAKGKRVARSVRAGMVQLNGSARAPGTPFGGYKQSGNGREGGRWGIEEFLETKLVAG
SIO_010081: AVI_RS25095
subclass of: SO_0000673
so part of: AVI_RS25095
location: 133034..134464
location: region:133034-134464:1
so has part: feature:133034-134464:1:exon

WP_139191475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133034-134464:1:exon

AVI_RS25100
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25100
old locus tag: Avi_8190
pseudo: true
so part of: sequence
location: complement(<134837..135273)
location: region:134837-135273:-1
so has part: feature:134837-135273:-1:exon
subclass of: SO_0000010

position:134837:-1
position: 134837
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:135273:-1
position: 135273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134837-135273:-1:exon

AVI_RS25100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25100
old locus tag: Avi_8190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611977.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: AVI_RS25100
subclass of: SO_0000673
so part of: AVI_RS25100
location: complement(<134837..135273)
location: region:134837-135273:-1
so has part: feature:134837-135273:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134837-135273:-1:exon

AVI_RS25105
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25105
old locus tag: Avi_8192
pseudo: true
so part of: sequence
location: complement(135333..>136156)
location: region:135333-136156:-1
so has part: feature:135333-136156:-1:exon
subclass of: SO_0000010

position:135333:-1
position: 135333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136156:-1
position: 136156
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135333-136156:-1:exon

AVI_RS25105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25105
old locus tag: Avi_8192
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019052766.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: AVI_RS25105
subclass of: SO_0000673
so part of: AVI_RS25105
location: complement(135333..>136156)
location: region:135333-136156:-1
so has part: feature:135333-136156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135333-136156:-1:exon

AVI_RS25110
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25110
pseudo: true
so part of: sequence
location: complement(<136149..136595)
location: region:136149-136595:-1
so has part: feature:136149-136595:-1:exon
subclass of: SO_0000010

position:136149:-1
position: 136149
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:136595:-1
position: 136595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136149-136595:-1:exon

AVI_RS25110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011508891.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AVI_RS25110
subclass of: SO_0000673
so part of: AVI_RS25110
location: complement(<136149..136595)
location: region:136149-136595:-1
so has part: feature:136149-136595:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136149-136595:-1:exon

AVI_RS25115
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25115
old locus tag: Avi_8194
so part of: sequence
location: 137162..137929
location: region:137162-137929:1
so has part: feature:137162-137929:1:exon
subclass of: SO_0000010

position:137162:1
position: 137162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137929:1
position: 137929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137162-137929:1:exon

AVI_RS25115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25115
old locus tag: Avi_8194
inference: COORDINATES: protein motif:HMM:NF014125.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RolB family protein
translation: MIRTVGINIQRFIMEFNRPIFIPSNLCLVFCPEQVAIAIEIALNLYRKFVEFDLMERQREWARTVPLTADFYWRVVAGEFFTKPLLDCPAKGHVFREVQLDRALLYIYGPRNFIANYIKTQTLWRPRRQDILACTMPPFREEICKREILRLHNSLSFVSYNTDADVEYYVAILPNQTFTKGPSFLLQSSGEYCGFFHADGERVKYDIIAFGRSHFRNSSPNDDSLFNLRSPLRAIEEAEPKTKKLKKFLSCFNSN
SIO_010081: AVI_RS25115
subclass of: SO_0000673
so part of: AVI_RS25115
location: 137162..137929
location: region:137162-137929:1
so has part: feature:137162-137929:1:exon

WP_139191439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137162-137929:1:exon

AVI_RS25120
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25120
old locus tag: Avi_8195
so part of: sequence
location: complement(138220..139356)
location: region:138220-139356:-1
so has part: feature:138220-139356:-1:exon
subclass of: SO_0000010

position:138220:-1
position: 138220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139356:-1
position: 139356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138220-139356:-1:exon

AVI_RS25120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25120
old locus tag: Avi_8195
inference: COORDINATES: protein motif:HMM:NF014381.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD/NADP-dependent octopine/nopaline dehydrogenase family protein
translation: MASELSVGVIGGGHAGTALAAWFSSQKIQTAMWAPANHPGSLLSIRQHGGITASGVVEGKHEITIHEELADLLASAKFLVLATRADVHEAFVQDLEKFVLKRPLLVICGHGFTVNYAARLMCERILETDDSPVTAKLVGGQGNEVHIKAILPSFGVSCYPVKRDGGGNLKLPKSVSETLAKIFGSSITVISPLHSLFFSNYIIHAVSATLNIGRLRDPEGSLTERAERWRMELESRVGADYRFYFYGQGTNSYVCSVIDAADKERLKVAGALGITLDTVLAECNTQSKTDYVNMREFSLAPFPYNVNFACPDNLQHRYFSEEIRTLEMICSIAESHRVKIPVTKSIMLLIKAARGEALHALSLPFDPTKLSIFGARTV
SIO_010081: AVI_RS25120
subclass of: SO_0000673
so part of: AVI_RS25120
location: complement(138220..139356)
location: region:138220-139356:-1
so has part: feature:138220-139356:-1:exon

WP_012649012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138220-139356:-1:exon

AVI_RS25125
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25125
old locus tag: Avi_8196
pseudo: true
so part of: sequence
location: 140222..141321
location: region:140222-141321:1
so has part: feature:140222-141321:1:exon
subclass of: SO_0000010

position:140222:1
position: 140222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141321:1
position: 141321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140222-141321:1:exon

AVI_RS25125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25125
old locus tag: Avi_8196
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019052766.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: AVI_RS25125
subclass of: SO_0000673
so part of: AVI_RS25125
location: 140222..141321
location: region:140222-141321:1
so has part: feature:140222-141321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140222-141321:1:exon

AVI_RS25130
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: repA
locus tag: AVI_RS25130
old locus tag: Avi_8198
so part of: sequence
location: 141732..142943
location: region:141732-142943:1
so has part: feature:141732-142943:1:exon
subclass of: SO_0000010

position:141732:1
position: 141732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142943:1
position: 142943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141732-142943:1:exon

AVI_RS25130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: repA
locus tag: AVI_RS25130
old locus tag: Avi_8198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011427337.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepA
translation: MIASQQQVEPAESSAAKISRQSRLLSAQLRSIRERLYEPVAAKTLKTFTSREAAMLLGIAESTLRQMSLDGESAIPDRRDNGRRIYTLHQVNQIRQHLAQKRPNEALEFFPRRRDGEKLQVIAVANFKGGSAKTTTTVHLAHYLAIQGLRVLAIDLDTQASLSAIFGYQPEFDVDQNETVYAGIRYDRRRKAVQDVIRKTYFAGIDLIPANLELMEYEHETPQAIADGYGRGEEIFFRRLSAVISEVEADYDIVLIDAPPQLGYLTLGALCAATALLITIHPAMIDVASMNQFLATMSDLMGVIEARGGTLSHDFIRYLITRHNPNDGPQVNVVTLLRSLFKEDVLAPVVVETTAIAIAGLEKKSLYELSRGSVGRDTLSRALESVDSVNREIFLYVKNVWGR
SIO_010081: AVI_RS25130
subclass of: SO_0000673
so part of: AVI_RS25130
location: 141732..142943
location: region:141732-142943:1
so has part: feature:141732-142943:1:exon

WP_012649013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141732-142943:1:exon

AVI_RS25135
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: repB
locus tag: AVI_RS25135
old locus tag: Avi_8200
so part of: sequence
location: 142940..143977
location: region:142940-143977:1
so has part: feature:142940-143977:1:exon
subclass of: SO_0000010

position:142940:1
position: 142940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143977:1
position: 143977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142940-143977:1:exon

AVI_RS25135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: repB
locus tag: AVI_RS25135
old locus tag: Avi_8200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007767713.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepB
translation: MMVNPEERSQQMNSLFGHIDTDGLAKQSSPLRFGQEKLRVGSAVVKSMDRAFVSIEDENRRLHNQLLSSGSAVELDPDRVAPSFINNRLDIEGDESFHTFVEGIKEAGQKLPILVRPLAGKLAHYRAAYGHRRLPACQILKRSAKAIVRELSDEEPVVSQGIENSERLNLSFNEQALFALNLKERKYSRELISDALGRNQGQRRAYISILINTAALIPEELIRPMGSPPSMGRPKWEKLGAFINNRNLSARRKKILADVTASPAWEKIGSARRFALIMTAFNRSTKCGPDLVEVSLDDGIIIVAKQTDKPTHISIPDNRFPGLSDWLLQRLPDLFEEFQWDNERF
SIO_010081: AVI_RS25135
subclass of: SO_0000673
so part of: AVI_RS25135
location: 142940..143977
location: region:142940-143977:1
so has part: feature:142940-143977:1:exon

WP_012649014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142940-143977:1:exon

AVI_RS25140
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: repC
locus tag: AVI_RS25140
old locus tag: Avi_8201
so part of: sequence
location: 144177..145484
location: region:144177-145484:1
so has part: feature:144177-145484:1:exon
subclass of: SO_0000010

position:144177:1
position: 144177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145484:1
position: 145484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144177-145484:1:exon

AVI_RS25140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: repC
locus tag: AVI_RS25140
old locus tag: Avi_8201
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007767716.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: MIDWDCDLVIRSRIAMTELSSVASFRRVTPGIAASARLAMANNVPDTTKSEIALLLKKAAPILGIDGPTYHVMDILLGLSRADDWRGSGRPIVAISNAKLAEYIMRSERTVNRCIRRLVEAGIAAYRDSSTGRRFVYRNKAGEVMAGFGIDFTPARVRADELKQAVDQYQQRLNIELAAKRDISRLSRAIEDLCTCNPSGVTTEKLELQAILGDSDGVIERAERIRQLHLQTLARLAPEYVPFDMTCEGDTGVTPDIDTNPESLSESNKMPTRSNERGIFQENGRYAAEGAFEKNPTNATVAMQDKTDGEDRDADTVQGEVLGSVSVGLLQAACPGAQAMIAQQFDSWSALGRSGERLRRMIGLSEAGWADGQKKVGPYAAAAILATVLEKSIRDPEQISKPGGYFRAMIDRAIDGRLNLERSLFGLADRGYGNP
SIO_010081: AVI_RS25140
subclass of: SO_0000673
so part of: AVI_RS25140
location: 144177..145484
location: region:144177-145484:1
so has part: feature:144177-145484:1:exon

WP_241868989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144177-145484:1:exon

AVI_RS25145
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25145
old locus tag: Avi_8202
so part of: sequence
location: complement(145481..146581)
location: region:145481-146581:-1
so has part: feature:145481-146581:-1:exon
subclass of: SO_0000010

position:145481:-1
position: 145481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146581:-1
position: 146581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145481-146581:-1:exon

AVI_RS25145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25145
old locus tag: Avi_8202
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019052766.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MVGRQAGFVALSDEDRNFLESQVRRHKAPRSLSDRCRIVLLCAQGLQSKDVAERLGVHEHTVGKWRRRFVQGGIDGLTDEYRAGRPRTVSDVQVAEVVERTLNTTPKDATHWSIRSMAADRGLSHTIIRRIWTAFGLQPHRSETFKLSSDPLFVDKVQDIVGLYMSPPDRAVVLCVDEKSQIQALDREQPVLPMAPGIAEQRRTHTYVRNGTTSLFAALDVATGAVIGQCYKRHRATEFLDFLKRIDAEMPKGPDVHLVMDNYATHKTPRIKAWLARRPHWHVHFTPTSASWINQVERWFAELMRKQLQRGVHRSTAELEADIDAFIATHNENPKPYRWVKSAGQILASVKRFCQKTMSRTSDSGD
SIO_010081: AVI_RS25145
subclass of: SO_0000673
so part of: AVI_RS25145
location: complement(145481..146581)
location: region:145481-146581:-1
so has part: feature:145481-146581:-1:exon

WP_012649016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145481-146581:-1:exon

AVI_RS25150
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25150
so part of: sequence
location: 146744..147133
location: region:146744-147133:1
so has part: feature:146744-147133:1:exon
subclass of: SO_0000010

position:146744:1
position: 146744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147133:1
position: 147133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146744-147133:1:exon

AVI_RS25150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007424819.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
translation: MLTKMTEADWAVALEVFRASLPRRGDKGRDDRLFLEALHYFSVNNITWRGLPERYGHWNSVWKRFSRLSKAGVFEIFFEHLGSLSTSADLVQMFDSTVVRAHVSAAGAKGGNMAKRLAARKAASRPKST
SIO_010081: AVI_RS25150
subclass of: SO_0000673
so part of: AVI_RS25150
location: 146744..147133
location: region:146744-147133:1
so has part: feature:146744-147133:1:exon

WP_041699590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146744-147133:1:exon

AVI_RS31285
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31285
pseudo: true
so part of: sequence
location: <147112..147525
location: region:147112-147525:1
so has part: feature:147112-147525:1:exon
subclass of: SO_0000010

position:147112:1
position: 147112
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:147525:1
position: 147525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147112-147525:1:exon

AVI_RS31285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31285
inference: COORDINATES: protein motif:HMM:NF033580.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AVI_RS31285
subclass of: SO_0000673
so part of: AVI_RS31285
location: <147112..147525
location: region:147112-147525:1
so has part: feature:147112-147525:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147112-147525:1:exon

AVI_RS29995
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS29995
pseudo: true
so part of: sequence
location: complement(<147542..147727)
location: region:147542-147727:-1
so has part: feature:147542-147727:-1:exon
subclass of: SO_0000010

position:147542:-1
position: 147542
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:147727:-1
position: 147727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147542-147727:-1:exon

AVI_RS29995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS29995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558310.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AVI_RS29995
subclass of: SO_0000673
so part of: AVI_RS29995
location: complement(<147542..147727)
location: region:147542-147727:-1
so has part: feature:147542-147727:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147542-147727:-1:exon

AVI_RS25160
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25160
old locus tag: Avi_8206
so part of: sequence
location: complement(147693..148139)
location: region:147693-148139:-1
so has part: feature:147693-148139:-1:exon
subclass of: SO_0000010

position:147693:-1
position: 147693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148139:-1
position: 148139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147693-148139:-1:exon

AVI_RS25160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25160
old locus tag: Avi_8206
inference: COORDINATES: protein motif:HMM:NF024954.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MGTALDIRRDYTAEDLRQLARKSRDTDWSRRLLALSVIYEGGSRSQAASMGGVGLQIVRDWVERFNQHGPDGLKTRKAKGREPLLNDKQRKALIEIVEKGPVPYLDGAVRWRLVDLVQWLCEPPRVYRRLQLVRKWSHDKQDNKQIFI
SIO_010081: AVI_RS25160
subclass of: SO_0000673
so part of: AVI_RS25160
location: complement(147693..148139)
location: region:147693-148139:-1
so has part: feature:147693-148139:-1:exon

WP_158212759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147693-148139:-1:exon

AVI_RS25165
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25165
old locus tag: Avi_8208
so part of: sequence
location: complement(148205..150673)
location: region:148205-150673:-1
so has part: feature:148205-150673:-1:exon
subclass of: SO_0000010

position:148205:-1
position: 148205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150673:-1
position: 150673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148205-150673:-1:exon

AVI_RS25165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25165
old locus tag: Avi_8208
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010974921.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: virA/G regulated protein
translation: MKTSGSSQSGYGESARSSAEVNTGITPVLHPKVPSNRFAGSTSDGQTDHWENSCSPFFYDGMRLGAAERSAYETWDRADRPGWKDPIINARMSAIDSSDWNLDFRESTSSTFVYEGVPLVEGERRAYEEWMEPGQPSWEQLVVNARIEQLHAASSIPNECDFVQQEFRSDASKRRRTSSIDQKIGFPHAFEFDGMRLGSPEREVYENWSKLQAPSWKDLIIDARLEAIDSSGWLNESNNSSVFEYEGLPLGEGERLAYEKWLGPAQPGWEDLVVDARIAELDRVASMSCSHERGKETPSNECERVPRVPIDDDEVSCASFVYDGVAERAAHNRGSKPYQPTWEDLIIDARQAVIEGDAESNPVIGTTPSSVFSYEGMSLGDAERRAYGHWKQPAQPRWQNLVVNARLAELDPAAWIPDEHDPFEDGKVTGLLSEASTNSKSRLSLVEQLEARPLCLTRDAAQEQTNVQNLACTQLEARRVLNFGPSGSDTDQTGSIAKSSPLDDVTKVKRLGSRSRRGARAAANDEIFHTKGSPSHGTGLTPQSTQPEKAASTRSDNIGTYGSRKNERARLATETGKYESEHIFGFKVVHHTLRSTKEGRRLERPMPAYLECKELHRQHVGTGRGRTGLVGRGWPDDASYRSDQRATLSDPVASTESVTASNGYQLNQLGYAHQLANDGLQCETPDGVIMPLQVATTSYNYTVSRDPVLSSPCKDQTSELLHLGPRGQTEAVLARETALTGKWPTREREQKVYREFLALYDVKKDLETMPLGLRKKKALLVSALNRTAASIGASKAENAFDEFYERRIYDPRDRARDNISAR
SIO_010081: AVI_RS25165
subclass of: SO_0000673
so part of: AVI_RS25165
location: complement(148205..150673)
location: region:148205-150673:-1
so has part: feature:148205-150673:-1:exon

WP_012649017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148205-150673:-1:exon

AVI_RS25170
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: virD4
locus tag: AVI_RS25170
old locus tag: Avi_8210
so part of: sequence
location: complement(150781..152769)
location: region:150781-152769:-1
so has part: feature:150781-152769:-1:exon
subclass of: SO_0000010

position:150781:-1
position: 150781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152769:-1
position: 152769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150781-152769:-1:exon

AVI_RS25170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: virD4
locus tag: AVI_RS25170
old locus tag: Avi_8210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010974920.1
note: The ATPase VirD4 is a core component of the VirB/VirD4 form of type IV secretion systems (T4SS), also known as type IVa secretion systems; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system ATPase VirD4
translation: MNSGKYTPIGLAAIIACSLAVGFCAASLYVTFRHGFTGEKMMTFSVFTFLYETPPYLGYASPTFYRGLAIIVVTSTVVLLGQLLLSMRDRQHHGTARWAGSSEMRHAKYLQRYSHVTGPIFGKTCGPRWFGSYLSNGEQPHSLVVAPTRAGKGVGVVIPTLLTFKGSVIALDVKGELFELTSRARRSSGDAVFKFSPLDPERRTHCYNPVLDIAALPAERRFTETRRLAANLITAKGKGAEGFIDGARDLFVAGILSCIERGTPTIGAVYDLFAQPGEKYKLFAQLAEETQNKEAQRIFDNMAGNDTKILTSYTSVLGDGGLNLWADPLVKAATSRSDFSVYDLRRKKTCIYLCVSPNDLEVVAPLMRLLFQQVVSILQRSLPLGDERHDVLFLLDEFKHLGKLEAVETAITTIAGYKGRFMFIIQSLSALTGTYDEAGKQNFLSNTGVQVFMATADDETPTYISKAIGDYTFQARSTSYSQARMFDHNIQISEQGAPLLRAEQVRLLDDDHEIVLIKGQPPLKLRKVRYYSDLILKRLFESQQGSLPEPASLRLPEDTNIFEGKLDQKAVDPISQKPVQIEESDYGKVVTPVSRPVAEGEHSAVIEVRTGSNEVDDKHEYRGADAATSEELLDIAPALLAQRELLEQIISLQQRGGTDSGT
SIO_010081: AVI_RS25170
subclass of: SO_0000673
so part of: AVI_RS25170
location: complement(150781..152769)
location: region:150781-152769:-1
so has part: feature:150781-152769:-1:exon

WP_041699501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150781-152769:-1:exon

AVI_RS25175
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25175
old locus tag: Avi_8211
so part of: sequence
location: complement(152830..155160)
location: region:152830-155160:-1
so has part: feature:152830-155160:-1:exon
subclass of: SO_0000010

position:152830:-1
position: 152830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155160:-1
position: 155160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152830-155160:-1:exon

AVI_RS25175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25175
old locus tag: Avi_8211
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: virA/G regulated protein
translation: MQSISRADHEVMSSSRFGNGELNRLREHEQTSDQSKSMVKRNISSELQVGTIAASLTMEDGLTATPAMQGAHRSVMGLDDIETGESDMQSQHEIATLPIDTSTFGSTQDAIIPGEGQPEETFDGAPYWIEDTGDSETNNIQSAQQGFSGPGLDDIDLLADNSSPLSTPVAPTEIAAANSSTEAGSTNIESIQICGDSAYSDDATEIGSQTVALIDYSSVRSLGSPEERFDDFPELTDEDLARIDALSEIRPTARREVANTIHTVRLDDAFSSEDFTERLGGGLTNPAVRQEGSRQEPSPSDPKSDDFPELTDEDLARIDALSEARPTTRREVANTIHAVRSDGAFSPVGFPVGRGGGLTNAAVRRESSRQEPSPSEPKSDDCPELTDEDLARIDAISEPHSKRYRFEQGVGENSHKLSVKEAIREVGWPNAVSGTKAARAAPVALESGVPRLPQANETEPTASDVARPLQIDNPPSADTRRDVSDKGKRKISLHYEVQQNPGATCAYRPHPSTRAAFDAEQLGDNLLIGHEPVPRWPHPLDQVVLFETGKQLFERLRRWPAAEELEKSVILVKADGAQRSYMPRNQLLLHLGPEQYLERMKALGLPGNTFSGLKSDSKYFYDTPAGLRVSEHDYEFPRQAGVHNPEVMVQHPSGMFFAFWPKLLRLERLATVTNTYGAENVWLKSPTNAYMTPETYNSKAANGAENLFIEFLRPDPVHDHSDPGTSNTKTVDGRNEGRAQQAEQLADRPMGRNGDGRDAQGGKRTLEPRVRETYGL
SIO_010081: AVI_RS25175
subclass of: SO_0000673
so part of: AVI_RS25175
location: complement(152830..155160)
location: region:152830-155160:-1
so has part: feature:152830-155160:-1:exon

WP_139191409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152830-155160:-1:exon

AVI_RS30000
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS30000
old locus tag: Avi_8212
so part of: sequence
location: complement(155516..156727)
location: region:155516-156727:-1
so has part: feature:155516-156727:-1:exon
subclass of: SO_0000010

position:155516:-1
position: 155516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156727:-1
position: 156727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155516-156727:-1:exon

AVI_RS30000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS30000
old locus tag: Avi_8212
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010974919.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: T-DNA border endonuclease VirD2
translation: MPDRSQVIIRIVPGGGTKTLQQIINQLEYLSRKGTLELQRSARHLDIFVPPDNIRDLARSWIQETGTYDESQPDEERQKELTTHIIVSFPAGTSQPAAYAASREWAAETFGSGEGGGQYNYLTAFHTDRDHPHLHVVVNRRELLGHKWLKISRRHPQLNYDALRTRMAKVSFRHGIVLEATRRAERGITERPMTFAQYRRLERQQANQIRFDDPDFEHFTPGENDREPEQFFDSSYGERPQNLPESPERNEHLQPMSEGRSRARIGSNGDGRDVEGASGTGLAIESVTHPTSEDDVQQRLHRKRPRGDEDEDRGAKLTRVNRVRAGVAITDVPVTGDGPTSSIQAPGSNPSQTDIATDGLPATADRPQQGGPNSKRPRDEEAEPSIRKRSRDGRSQEDEGNRR
SIO_010081: AVI_RS30000
subclass of: SO_0000673
so part of: AVI_RS30000
location: complement(155516..156727)
location: region:155516-156727:-1
so has part: feature:155516-156727:-1:exon

WP_012649020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155516-156727:-1:exon

AVI_RS30005
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: virD1
locus tag: AVI_RS30005
old locus tag: Avi_8213
so part of: sequence
location: complement(156754..157200)
location: region:156754-157200:-1
so has part: feature:156754-157200:-1:exon
subclass of: SO_0000010

position:156754:-1
position: 156754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157200:-1
position: 157200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156754-157200:-1:exon

AVI_RS30005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: virD1
locus tag: AVI_RS30005
old locus tag: Avi_8213
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010891489.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: T-DNA border endonuclease subunit VirD1
translation: MSQSAKSPSDNIVDRREGSTIEGFKVVSTRLRSAEYESFSRQARRLGLSDSMAIRIAVRRIAGFLEIDAETRHEMEAILHSIGTLSNNIAALLNSYAENPTTDLGALQAERNAFGKAFADLDGLLRSILSVSRRRIDGCSMLADASKH
SIO_010081: AVI_RS30005
subclass of: SO_0000673
so part of: AVI_RS30005
location: complement(156754..157200)
location: region:156754-157200:-1
so has part: feature:156754-157200:-1:exon

WP_012649021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156754-157200:-1:exon

AVI_RS25190
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25190
old locus tag: Avi_8214
so part of: sequence
location: 157457..158152
location: region:157457-158152:1
so has part: feature:157457-158152:1:exon
subclass of: SO_0000010

position:157457:1
position: 157457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158152:1
position: 158152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157457-158152:1:exon

AVI_RS25190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25190
old locus tag: Avi_8214
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011654600.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer ATPase VirC1
translation: MKLLAFCSFKGGAGKTTALMGLCTAFARDGKRVALLDADENRPLTRWKENAIRSNTWDRSCEVYAAEEMSLLEAAYEDAELREFDYALADTHGGSSELNNTIIASSNLLLIPTMLTPLDIDEALSTYRYVIELLLSENLVIPTAVLRQRVPVGRLTTSQRAMSNMLANLPVVQSPMHERDAFAAMKERGMLHLTLLNTTNDPTMRLLERNLRIAMEELVTISELIGKTLGN
SIO_010081: AVI_RS25190
subclass of: SO_0000673
so part of: AVI_RS25190
location: 157457..158152
location: region:157457-158152:1
so has part: feature:157457-158152:1:exon

WP_012649022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157457-158152:1:exon

AVI_RS25195
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25195
old locus tag: Avi_8215
so part of: sequence
location: 158155..158763
location: region:158155-158763:1
so has part: feature:158155-158763:1:exon
subclass of: SO_0000010

position:158155:1
position: 158155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158763:1
position: 158763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158155-158763:1:exon

AVI_RS25195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25195
old locus tag: Avi_8215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032488279.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein VirC2
translation: MGIHKPALSVGEAKRLAAARPEIVQTVPTRFSQGAQPPRLPERGRPLDRPLPTAAKRRDNFDRQLVLTADALSSAAAPEKIQIFLSARPPAPEVSKIYDTLILQYSASKSLQMILRRALADFESMLEDGSFSTAPKSYPISHVVNKPIIVQTSRMFPVSLLELARNHFDPLRLETARAFGHKLATAALASFFATEKTRKEGK
SIO_010081: AVI_RS25195
subclass of: SO_0000673
so part of: AVI_RS25195
location: 158155..158763
location: region:158155-158763:1
so has part: feature:158155-158763:1:exon

WP_041699509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158155-158763:1:exon

AVI_RS25200
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25200
old locus tag: Avi_8217
so part of: sequence
location: complement(158885..159610)
location: region:158885-159610:-1
so has part: feature:158885-159610:-1:exon
subclass of: SO_0000010

position:158885:-1
position: 158885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159610:-1
position: 159610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158885-159610:-1:exon

AVI_RS25200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25200
old locus tag: Avi_8217
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014528527.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MKHVLVIDDDAAMRHLITEYLTIHALRVTAVSDSQQFNRVLASETVDVVVVDLNLGREDGLEIVRGLATKSDIPIIIISGDRLEEADKVVALELGATDFIAKPFGTREFLARIRVALRVRPNVMRTKDRRSFCFAGWTLSLRQRRLTSTDNGEVKLTAGEFNLLVAFLEKPRDVLSREQLLIASRVRDEEVYDRSIDVLILRLRRKLEEDSASPHLIKTARGAGYFFDADVNVSFGGMMAA
SIO_010081: AVI_RS25200
subclass of: SO_0000673
so part of: AVI_RS25200
location: complement(158885..159610)
location: region:158885-159610:-1
so has part: feature:158885-159610:-1:exon

WP_012649024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158885-159610:-1:exon

AVI_RS25205
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: virB11
locus tag: AVI_RS25205
old locus tag: Avi_8218
so part of: sequence
location: complement(159841..160875)
location: region:159841-160875:-1
so has part: feature:159841-160875:-1:exon
subclass of: SO_0000010

position:159841:-1
position: 159841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160875:-1
position: 160875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159841-160875:-1:exon

AVI_RS25205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: virB11
locus tag: AVI_RS25205
old locus tag: Avi_8218
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011427356.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MEVNPQLRVLLKPVLQWLDDPRTEEVAINGPGEAFVRQSGVFTRFAAPFSCDDLEDIAILAGALRKQDVGPRNPLCATELPGGERMQICLPPTVPSGTVSLTIRRPSNRVSELGEVSARYDARRWNQWQIRTQRRDQLDEAILRDYDNGDLESFLRACVIGKRTMLLCGPTGSGKTTMSKTLISAIPREERLITIEDTLELVIPHENHVRLLYSKSGGGLGAVTAEQLLQASLRMRPDRILLGEMRDDAAWAYLSEVVSGHPGSISTIHGANPVQGFKKLFSLVKSSAQGASLEDRTLIDMLATAIDVIVPFRAYGDVYEVGEVWLAADARRRGETIGDLLNQH
SIO_010081: AVI_RS25205
subclass of: SO_0000673
so part of: AVI_RS25205
location: complement(159841..160875)
location: region:159841-160875:-1
so has part: feature:159841-160875:-1:exon

WP_012649025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159841-160875:-1:exon

AVI_RS25210
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: virB10
locus tag: AVI_RS25210
old locus tag: Avi_8219
so part of: sequence
location: complement(160909..162030)
location: region:160909-162030:-1
so has part: feature:160909-162030:-1:exon
subclass of: SO_0000010

position:160909:-1
position: 160909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162030:-1
position: 162030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160909-162030:-1:exon

AVI_RS25210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: virB10
locus tag: AVI_RS25210
old locus tag: Avi_8219
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007538738.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB10
translation: MEEVSAQSREGIDAPGSLVTDLHGRRLSGSQKLLVAGLVLVLSLGLIWLGARPKKKTEPSPPNTVIDANTKPFRPAPIDIPTTPPPTSEATVLPSDQHQREHNELRPEETPIFAYSGGTQNGVKSVANAEIKNGDDDDRNPDSLAVSEHSAENDLSARLKPTVVQPSLATLLPHPDFTVTQGTIIPCILQTAIDTHLAGYVKCVLPQDIRGATGNVVLLDRGTTVVGEIQRGLQQGDARVFVLWNRAETPSHAVVSLSSPGADELGRSGLRGTVDNHFWKRFSGAMLLSVVQGAVQAASSYAGNSAGGTSFNSFQNNGEQAADTALRATINIPPTLTKNQGDTVSIFVARDLDFSGIYQLYVTGGSVKRRRLP
SIO_010081: AVI_RS25210
subclass of: SO_0000673
so part of: AVI_RS25210
location: complement(160909..162030)
location: region:160909-162030:-1
so has part: feature:160909-162030:-1:exon

WP_012649026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160909-162030:-1:exon

AVI_RS25215
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: virB9
locus tag: AVI_RS25215
old locus tag: Avi_8220
so part of: sequence
location: complement(162030..162908)
location: region:162030-162908:-1
so has part: feature:162030-162908:-1:exon
subclass of: SO_0000010

position:162908:-1
position: 162908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162030-162908:-1:exon

AVI_RS25215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: virB9
locus tag: AVI_RS25215
old locus tag: Avi_8220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010891495.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein VirB9
translation: MTKNLFLGLVCILFVTSGAKAEDTPAAGKMDPRMRYLAYNPDEVVHLSTAVGATLVVTFGPNETVTAVAVSNSKDLAALPRGNYLFFKASKVLQPQPVIVLTASDAGMRRYVFSLATKTMSRLDKEQSDLYYSVQFTYPADIAAARRKEAEQRDLAGLMRAQAQYQRRAEDLLGRPAEGGDSGAKNWSYVAQGDRSLLPIEVFDNGFSTTFRFPGNVRVPSIYVINPDGKEATANYSVKGDYVEVASVSREWRLRDGHTVLCIWNKSFDVVGRKPGTGTVRPDVVRVLKEPR
SIO_010081: AVI_RS25215
subclass of: SO_0000673
so part of: AVI_RS25215
location: complement(162030..162908)
location: region:162030-162908:-1
so has part: feature:162030-162908:-1:exon

WP_012649027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162030-162908:-1:exon

AVI_RS25220
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25220
old locus tag: Avi_8221
so part of: sequence
location: complement(162905..163618)
location: region:162905-163618:-1
so has part: feature:162905-163618:-1:exon
subclass of: SO_0000010

position:162905:-1
position: 162905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163618:-1
position: 163618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162905-163618:-1:exon

AVI_RS25220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25220
old locus tag: Avi_8221
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003537093.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB8
translation: MIDSEYALLVEREALADHYKEVEAFQSARARSARRISRALAALAIIAVAGNLAQAFAIAVMVPLNKLVPVYLWVRPDGTVDSEVSVSRLPATQEQAVVNASLWEYVRLRESYTSDTAQYAYDLVSSFSAPTVRQDYQQFFNYPSPSSPQTIIGKRGKLESEHISSNELMPGVQQIRYKRTLTMEGQAPIVTTWTATVHYETVANLPGRLRLTNPGGLIVTSYQTSEDSVSNTTRSQQ
SIO_010081: AVI_RS25220
subclass of: SO_0000673
so part of: AVI_RS25220
location: complement(162905..163618)
location: region:162905-163618:-1
so has part: feature:162905-163618:-1:exon

WP_012649028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162905-163618:-1:exon

AVI_RS30010
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS30010
old locus tag: Avi_8336
so part of: sequence
location: complement(163605..163772)
location: region:163605-163772:-1
so has part: feature:163605-163772:-1:exon
subclass of: SO_0000010

position:163605:-1
position: 163605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163772:-1
position: 163772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163605-163772:-1:exon

AVI_RS30010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS30010
old locus tag: Avi_8336
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010891497.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system lipoprotein VirB7
translation: MKYFLLFLILGLASCQTSDQLATSKGPVFPLNVGRWQPTQSDLQLTNAGEANDRL
SIO_010081: AVI_RS30010
subclass of: SO_0000673
so part of: AVI_RS30010
location: complement(163605..163772)
location: region:163605-163772:-1
so has part: feature:163605-163772:-1:exon

WP_012649104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163605-163772:-1:exon

AVI_RS25225
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25225
old locus tag: Avi_8222
so part of: sequence
location: complement(163800..164687)
location: region:163800-164687:-1
so has part: feature:163800-164687:-1:exon
subclass of: SO_0000010

position:163800:-1
position: 163800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164687:-1
position: 164687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163800-164687:-1:exon

AVI_RS25225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25225
old locus tag: Avi_8222
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003537089.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MNFSIPAPFTAIHTIFDLAFTVGLDTLLGDIQRAVSAPLVACVTLWIIVQGILVMRGEMDARGGITRVIMISVVVALVVEQAEYHDYVVSVFEDTIPNFIQQFGISGLPLQTIPAQLDTMFSLTQVAFQKIASEIGPMNDQDILAFQGAQWIFYGTLWTAFGIYDAVGILTKVLLAIGPLILIGYLFDRTRDMAAKWIGQLLTYGILLLLLNVVATIVVLTEATALVLILAAVTSAGTTAAKIIGLYELDMFFLTGDALIVALPAIAGNIGGSYWSGGTQTVGSLNRHLARTIRR
SIO_010081: AVI_RS25225
subclass of: SO_0000673
so part of: AVI_RS25225
location: complement(163800..164687)
location: region:163800-164687:-1
so has part: feature:163800-164687:-1:exon

WP_012649029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163800-164687:-1:exon

AVI_RS25230
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: virB5
locus tag: AVI_RS25230
old locus tag: Avi_8223
so part of: sequence
location: complement(164747..165415)
location: region:164747-165415:-1
so has part: feature:164747-165415:-1:exon
subclass of: SO_0000010

position:164747:-1
position: 164747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165415:-1
position: 165415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164747-165415:-1:exon

AVI_RS25230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: virB5
locus tag: AVI_RS25230
old locus tag: Avi_8223
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019856522.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pilin minor subunit VirB5
translation: MKTAKLAINALFICLALSGSAKAQFVVSDPVTETETLTTALNTAANLEQLITMVTMLTAPFAVTGILSALDQKNQYPSAGELDKEMFSPKTPASTNARTITLDADRAVVGDDAEANLLRRQIAGAANAAGVAADNLDAMDKRLKANSETSAQLSRSRNIMAATVTNGLLLKQIHDAIIQNIQATSLLTMTTAQTGLHETEEAATQRKEHQATALIFGAAQLH
SIO_010081: AVI_RS25230
subclass of: SO_0000673
so part of: AVI_RS25230
location: complement(164747..165415)
location: region:164747-165415:-1
so has part: feature:164747-165415:-1:exon

WP_012649030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164747-165415:-1:exon

AVI_RS25235
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25235
old locus tag: Avi_8224
so part of: sequence
location: complement(165443..167812)
location: region:165443-167812:-1
so has part: feature:165443-167812:-1:exon
subclass of: SO_0000010

position:165443:-1
position: 165443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167812:-1
position: 167812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165443-167812:-1:exon

AVI_RS25235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25235
old locus tag: Avi_8224
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018009783.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4 family type IV secretion/conjugal transfer ATPase
translation: MFGANGRTERSGEIYLPYVGHLSDHIVLLEDGSILTMAHISGLPFELEEVEVRNARCRAFNTLFRNIADDNVSVYAHLVRHSDVPAPPVRHFRSAFASSLSETFEQRVLSGKLFRNDHFLTLIVSPRTALGKVRSRFTTRYGKNLGDLAHQIRHLEDLWNIVAGALDGYGLRRLGIREKNQVLFTEIGEALRLIMTCRFLPVPVVSGSLGAAVYTDRVICGKRALEIRAPKDRYVGSIFSFREYPAKTRPGMLNILLLSSFPLVLSQSFSFLTRAQSHAKLSLKSNQMTSSGDKAVTQIGELAQAEDSLASSEFVMGSHHLSLCVYADDLDTLADYGARARTSLSDAGAVIVQESIGMEAAYWSQFPGNHRWRTRPGAITSRNFAGLVSFENFPIGRKSGHWGGAVARFRTNGGTPFDYIPHENDVGMTAIFGPIGRGKTTLMTFILAMLEQSMAGRSGTIVFFDKDRGGELLVRATGGTYLTLRRGVPSGLAPLRGLEDTAAARDFLREWIVALIESDGRGGISPEENRRLERGIQRQLSFEPNMRSLAGLREFLLHGPSEGAGARLQRWCRGNALGWAFDGESDEVKLDPSITGFDMTHLLDYEEVCAPAAAYLLHRIGAMVDGRRFVMSCDEFRAYLLNQKFAAVVDKFLLTVRKNNGMLILATQQPEHVLDSPLGASLVAQCMTKIFYPSPTADRSAYIDGLKCTEREFQAIREDMAIGSRKFLLKRESGSVVCEFDLRDMSEYVAVLSGRANTVRFAQQLRETCGEDPSAWLDEFMTRYREAQD
SIO_010081: AVI_RS25235
subclass of: SO_0000673
so part of: AVI_RS25235
location: complement(165443..167812)
location: region:165443-167812:-1
so has part: feature:165443-167812:-1:exon

WP_012649031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165443-167812:-1:exon

AVI_RS25240
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25240
old locus tag: Avi_8225
so part of: sequence
location: complement(167812..168138)
location: region:167812-168138:-1
so has part: feature:167812-168138:-1:exon
subclass of: SO_0000010

position:168138:-1
position: 168138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167812-168138:-1:exon

AVI_RS25240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25240
old locus tag: Avi_8225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019856520.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB3
translation: MIKDLEEATLYLAATRPALFFGVPLTLAGVFMMLAGFLIVIVQNPLYEIVLLPLWLGARLVVERDYNAASVVLLFLQTAGRSVDGHTWGGASVSPNPIRVASRGRGMT
SIO_010081: AVI_RS25240
subclass of: SO_0000673
so part of: AVI_RS25240
location: complement(167812..168138)
location: region:167812-168138:-1
so has part: feature:167812-168138:-1:exon

WP_012649032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167812-168138:-1:exon

AVI_RS25245
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: virB2
locus tag: AVI_RS25245
old locus tag: Avi_8226
so part of: sequence
location: complement(168135..168500)
location: region:168135-168500:-1
so has part: feature:168135-168500:-1:exon
subclass of: SO_0000010

position:168135:-1
position: 168135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168500:-1
position: 168500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168135-168500:-1:exon

AVI_RS25245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: virB2
locus tag: AVI_RS25245
old locus tag: Avi_8226
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010891502.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pilin major subunit VirB2
translation: MACFEKYPELSKIRDLRDRVVSLLVPHLPSVSGAIGWSLFFREPAAAQAAGGTDPATMVNNICTFILGPFGQSLAVLGIVAIGVSWMFGRASLGLVAGVVGGIVIMFGASFLGQTLTGGGG
SIO_010081: AVI_RS25245
subclass of: SO_0000673
so part of: AVI_RS25245
location: complement(168135..168500)
location: region:168135-168500:-1
so has part: feature:168135-168500:-1:exon

WP_012649033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168135-168500:-1:exon

AVI_RS25250
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25250
old locus tag: Avi_8227
so part of: sequence
location: complement(168516..169232)
location: region:168516-169232:-1
so has part: feature:168516-169232:-1:exon
subclass of: SO_0000010

position:168516:-1
position: 168516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169232:-1
position: 169232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168516-169232:-1:exon

AVI_RS25250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25250
old locus tag: Avi_8227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013533344.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system lytic transglycosylase VirB1
translation: MLKAAGSFGIILLMIQPSKAAPLSFAEFNQLARECAPSVAPSTLGAIAKVESQFDPLVLHDNTTGETLHCRNHADATQSVDHRLVAGHSVDVGLMQVNSKNFANLGLTPGTAIEPCASLSAAAHLLVRHYRGGNTVESKQLALRRAISAYNTGDPTRGFANGYVRRVEVAAQQLVPPLAQSAKKSDRGEPNSEEPWNVWESYERSHSAIGADGSSAPPEAQELNDRAPSEQDQVFRTD
SIO_010081: AVI_RS25250
subclass of: SO_0000673
so part of: AVI_RS25250
location: complement(168516..169232)
location: region:168516-169232:-1
so has part: feature:168516-169232:-1:exon

WP_012649034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168516-169232:-1:exon

AVI_RS25255
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25255
old locus tag: Avi_8229
pseudo: true
so part of: sequence
location: complement(169518..>170164)
location: region:169518-170164:-1
so has part: feature:169518-170164:-1:exon
subclass of: SO_0000010

position:169518:-1
position: 169518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170164:-1
position: 170164
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169518-170164:-1:exon

AVI_RS25255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25255
old locus tag: Avi_8229
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011970739.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: AVI_RS25255
subclass of: SO_0000673
so part of: AVI_RS25255
location: complement(169518..>170164)
location: region:169518-170164:-1
so has part: feature:169518-170164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169518-170164:-1:exon

AVI_RS25260
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25260
so part of: sequence
location: 170138..170527
location: region:170138-170527:1
so has part: feature:170138-170527:1:exon
subclass of: SO_0000010

position:170138:1
position: 170138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170527:1
position: 170527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170138-170527:1:exon

AVI_RS25260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012655097.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MHLINEQGIVAESFEPGVRVVDVARRHGVIANQLSDWRRQVRDGILVLPFAAATTPSEHDGIEPAFVPLAIAADAPEPVNRLPLPKLASDRPKVQVLTLEIGSDVVMRVPNDVSVERVAALVRAVRGAP
SIO_010081: AVI_RS25260
subclass of: SO_0000673
so part of: AVI_RS25260
location: 170138..170527
location: region:170138-170527:1
so has part: feature:170138-170527:1:exon

WP_234618200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170138-170527:1:exon

AVI_RS25265
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: tnpB
locus tag: AVI_RS25265
old locus tag: Avi_8230
so part of: sequence
location: 170524..170877
location: region:170524-170877:1
so has part: feature:170524-170877:1:exon
subclass of: SO_0000010

position:170524:1
position: 170524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170877:1
position: 170877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170524-170877:1:exon

AVI_RS25265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: tnpB
locus tag: AVI_RS25265
old locus tag: Avi_8230
inference: COORDINATES: protein motif:HMM:NF017528.2
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIVAGQRLPILIATRPVDFRCGHQALALMVQTELKLDPHSGITVIFRSKRGDRLKILVWDGRGMVLIYKILEQGSFAWPKVQDGTMRLSRGQYEAMFEGLDWRRVMAQRVTAPSAAG
SIO_010081: AVI_RS25265
subclass of: SO_0000673
so part of: AVI_RS25265
location: 170524..170877
location: region:170524-170877:1
so has part: feature:170524-170877:1:exon

WP_012649035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170524-170877:1:exon

AVI_RS25270
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25270
old locus tag: Avi_8231
so part of: sequence
location: 170939..172600
location: region:170939-172600:1
so has part: feature:170939-172600:1:exon
subclass of: SO_0000010

position:170939:1
position: 170939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172600:1
position: 172600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170939-172600:1:exon

AVI_RS25270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25270
old locus tag: Avi_8231
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612018.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MSQPIDLSLYPDLPSEVAKAFAEMQFELSVERAARQHEQAVVAEKDLFIAELKELIETLEGQVHEYRRAKFGPKSEKLDPAQMELALEELETAIAETQARIAAVEKKIEASAINPGEVGDPDKAVSRKERKARALPEHLPRVERVIEPESIVCPCGCGNMVRIGEERLDRVPARYEVIVTIRPKYACPKGRTGVVQAKAPAHLLEGSWPTEALLAEIAVSKHSEHMPLNRQAEVMARHGGPIDRPVLADWMGRTGSEIRSVVDHMAKQLLGESTRLYVNETTAPVLDPGRGKTKTGYLRAVLRDDRGWNGSAPSGVVFHYRPGRKGDYAAEILEGFNGTIQVNAYGGYSHLATSDRVGGDPWKLAFCWAHGRRKLIKAAPKSGSPIVDEALIRIAALYKIEDSIRGNEPEHRRAVRQELSLPLVDKFFTWIAAQAARVSRKSDLGKALAYMLTRQDGFRLFLDDSHVDIDSNLVENAIRRPAMNRRNALFAGHDEGGRNWARFASLIGTCKMNGIEPYAYLCDLFTRLANGHIAKDIDALMPWAYAARIKASQ
SIO_010081: AVI_RS25270
subclass of: SO_0000673
so part of: AVI_RS25270
location: 170939..172600
location: region:170939-172600:1
so has part: feature:170939-172600:1:exon

WP_012649036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170939-172600:1:exon

AVI_RS25275
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25275
pseudo: true
so part of: sequence
location: <172703..>172861
location: region:172703-172861:1
so has part: feature:172703-172861:1:exon
subclass of: SO_0000010

position:172703:1
position: 172703
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:172861:1
position: 172861
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172703-172861:1:exon

AVI_RS25275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007011060.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-binding protein
SIO_010081: AVI_RS25275
subclass of: SO_0000673
so part of: AVI_RS25275
location: <172703..>172861
location: region:172703-172861:1
so has part: feature:172703-172861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172703-172861:1:exon

AVI_RS31290
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31290
pseudo: true
so part of: sequence
location: <172908..173030
location: region:172908-173030:1
so has part: feature:172908-173030:1:exon
subclass of: SO_0000010

position:172908:1
position: 172908
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:173030:1
position: 173030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172908-173030:1:exon

AVI_RS31290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011427378.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: AVI_RS31290
subclass of: SO_0000673
so part of: AVI_RS31290
location: <172908..173030
location: region:172908-173030:1
so has part: feature:172908-173030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172908-173030:1:exon

AVI_RS25285
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25285
old locus tag: Avi_8235
pseudo: true
so part of: sequence
location: complement(<173302..174006)
location: region:173302-174006:-1
so has part: feature:173302-174006:-1:exon
subclass of: SO_0000010

position:173302:-1
position: 173302
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:174006:-1
position: 174006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173302-174006:-1:exon

AVI_RS25285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25285
old locus tag: Avi_8235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009996985.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AVI_RS25285
subclass of: SO_0000673
so part of: AVI_RS25285
location: complement(<173302..174006)
location: region:173302-174006:-1
so has part: feature:173302-174006:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173302-174006:-1:exon

AVI_RS25290
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: tnpB
locus tag: AVI_RS25290
old locus tag: Avi_8237
so part of: sequence
location: complement(174077..174424)
location: region:174077-174424:-1
so has part: feature:174077-174424:-1:exon
subclass of: SO_0000010

position:174077:-1
position: 174077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174424:-1
position: 174424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174077-174424:-1:exon

AVI_RS25290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: tnpB
locus tag: AVI_RS25290
old locus tag: Avi_8237
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017183759.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIEPSGNVRVYLACGVTDMRRGIDGLSALVETVVKEAPGSGAIFGFRGKRADRIKLLWWDGQGFCLFYKVLERGYFPWPRAKEGVAPLTQAQLSMLVEGIDWRRPAWTSAPARTG
SIO_010081: AVI_RS25290
subclass of: SO_0000673
so part of: AVI_RS25290
location: complement(174077..174424)
location: region:174077-174424:-1
so has part: feature:174077-174424:-1:exon

WP_041699516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174077-174424:-1:exon

AVI_RS25295
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25295
old locus tag: Avi_8238
so part of: sequence
location: complement(174421..174783)
location: region:174421-174783:-1
so has part: feature:174421-174783:-1:exon
subclass of: SO_0000010

position:174421:-1
position: 174421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174783:-1
position: 174783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174421-174783:-1:exon

AVI_RS25295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25295
old locus tag: Avi_8238
inference: COORDINATES: protein motif:HMM:NF013677.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MARMEIMSGSERRRRWSDAAKLKILAEADQPGVRIGDVARRHDIYPSQIRLWRQSFSYVGRPAMFLPVEITEEVSATPGPDTPPTPAVIEISLRNGRCLRVPADIELRMLGSLIACVEAA
SIO_010081: AVI_RS25295
subclass of: SO_0000673
so part of: AVI_RS25295
location: complement(174421..174783)
location: region:174421-174783:-1
so has part: feature:174421-174783:-1:exon

WP_012649039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174421-174783:-1:exon

AVI_RS25300
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25300
old locus tag: Avi_8242
so part of: sequence
location: complement(175275..177296)
location: region:175275-177296:-1
so has part: feature:175275-177296:-1:exon
subclass of: SO_0000010

position:175275:-1
position: 175275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177296:-1
position: 177296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175275-177296:-1:exon

AVI_RS25300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25300
old locus tag: Avi_8242
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010974923.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: virA/G regulated protein
translation: MVDTTKKSVAKSLTADMRRSARRLYEQMRKALLTEEEASRKRARFETLEQKQKYAADMQIVDKLGADFRGEISYKRLGNKRVRVGNSKELTREHGILRKTRKVLKRSAETGDVYLGLHEKRTWRSVSSHFYAEDGTLRAKHVKYKDGRFEEKWERDENGLLIRTQYVNRNRLFQSISERLSAPYRSGAENRLFRELTRQKGSTQETFERDDKGNLELIGRKRLGFSKTLTKTADRQTSRTTIRKLGGAFSKSYSSLLDKEGNELGRDISSHRRLLNKRSAVYDDASGQLKSTKHTFGKIYKSETAYLNSDVKKVSKKILGVTVRRKLTALTGQEREAQKLRNLESTEHRKAWQERSIIPISLLPTTRSHSVSFVGDGRRNEAESKVVPAKDQRTDAVVPTSSLFRQPHSERQAVSQTLPPSSNGHLSYPAFKAEEAKPYKRPVAINLQRDNERKTQEEKNLGEWRGHLFRPTGSTKGVFFTASPERTTVFGSPEPSLNRSADPQLSVDRTVSQGPSVPLSPINNHQSDPNEQELLSFLHNAPVPPSLGVHSGPVGRAEESLQGAFEDSPVRKSLVSESVVEEHLQGPLERDHSINTISERFDPQSLFGESGLSHVSEGRQEPSMQGDHLTDPEQQALLNELLSVPLPKADNERSRVLESSRNRERSMSAGLSL
SIO_010081: AVI_RS25300
subclass of: SO_0000673
so part of: AVI_RS25300
location: complement(175275..177296)
location: region:175275-177296:-1
so has part: feature:175275-177296:-1:exon

WP_012649040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175275-177296:-1:exon

AVI_RS25305
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25305
old locus tag: Avi_8243
so part of: sequence
location: complement(177363..179036)
location: region:177363-179036:-1
so has part: feature:177363-179036:-1:exon
subclass of: SO_0000010

position:177363:-1
position: 177363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179036:-1
position: 179036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177363-179036:-1:exon

AVI_RS25305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25305
old locus tag: Avi_8243
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010974922.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system single-stranded DNA binding effector VirE2
translation: MMDPKAYGDGKYINVTDGNDAQNAGVDDPKRQKTEGANSNTLFDVHMTGSHETLEHNMHESPTHTEDLESHFDEGTLGYQSGHDSTSVHGYQSEGENDLSSLFANMALPGHDRRPDEYILVRQTGQDRFAGTIKGNLNHLPTKAEFNASCRLYRDGVGNYYPPPLAFDKIDLPEQLGASLHKLEPKERSKPRFQYKLEVWNRAHAEMGITGTAIFYQTNKNIKLDRNNKLRPEDRYIQTEKYGRREIQKRYEHEFQAGSLLPDILIKTPQNDIHFAYRFAGDAYANKRFEEFERAIKNKYGSNTEIKLKSRSGIMHDSKYLESWERGSADIRFAEFAGENRAHNRQFPAATVNMGRQPDGQEGTTSDRHVSVDYLFQNAPNSPWTQALKEGKLWDRVQVLARDGNGYMSPARLEYSDPEHFTQLMNRVGLPVSMGRQSHANSVKFEQFDLQASVIVADGPNLRDVRDLSQEKRQQLTQKDVLISDRNEKGQRTGTYTSVAEYERLMMKLPDDAAQLLAVPTDKYSREFVRPEAALPPISDSRRGYESRPRGTTVNSL
SIO_010081: AVI_RS25305
subclass of: SO_0000673
so part of: AVI_RS25305
location: complement(177363..179036)
location: region:177363-179036:-1
so has part: feature:177363-179036:-1:exon

WP_234665192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177363-179036:-1:exon

AVI_RS25310
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: virE1
locus tag: AVI_RS25310
old locus tag: Avi_8244
so part of: sequence
location: complement(179047..179238)
location: region:179047-179238:-1
so has part: feature:179047-179238:-1:exon
subclass of: SO_0000010

position:179047:-1
position: 179047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179238:-1
position: 179238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179047-179238:-1:exon

AVI_RS25310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: virE1
locus tag: AVI_RS25310
old locus tag: Avi_8244
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010891482.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system effector chaperone VirE1
translation: MAISELNVNKNMPVLSGEEPQKFHMEELSDNYQPNGFTSLDLDMIELENFVLQCPLPEDNLAG
SIO_010081: AVI_RS25310
subclass of: SO_0000673
so part of: AVI_RS25310
location: complement(179047..179238)
location: region:179047-179238:-1
so has part: feature:179047-179238:-1:exon

WP_012649042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179047-179238:-1:exon

AVI_RS31295
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31295
pseudo: true
so part of: sequence
location: complement(179753..>180166)
location: region:179753-180166:-1
so has part: feature:179753-180166:-1:exon
subclass of: SO_0000010

position:179753:-1
position: 179753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180166:-1
position: 180166
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179753-180166:-1:exon

AVI_RS31295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31295
inference: COORDINATES: protein motif:HMM:NF033580.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AVI_RS31295
subclass of: SO_0000673
so part of: AVI_RS31295
location: complement(179753..>180166)
location: region:179753-180166:-1
so has part: feature:179753-180166:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179753-180166:-1:exon

AVI_RS25320
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25320
so part of: sequence
location: complement(180145..180534)
location: region:180145-180534:-1
so has part: feature:180145-180534:-1:exon
subclass of: SO_0000010

position:180145:-1
position: 180145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180534:-1
position: 180534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180145-180534:-1:exon

AVI_RS25320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007424819.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
translation: MLTKMTEADWAVALEVFRASLPRRGDKGRDDRLFLEALHYFSVNNITWRGLPERYGHWNSVWKRFSRLSKAGVFEIFFEHLGSLSTSADLVQMFDSTVVRAHVSAAGAKGGNMAKRLAARKAASRPKST
SIO_010081: AVI_RS25320
subclass of: SO_0000673
so part of: AVI_RS25320
location: complement(180145..180534)
location: region:180145-180534:-1
so has part: feature:180145-180534:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180145-180534:-1:exon

AVI_RS25325
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25325
old locus tag: Avi_8247
pseudo: true
so part of: sequence
location: complement(180927..>181573)
location: region:180927-181573:-1
so has part: feature:180927-181573:-1:exon
subclass of: SO_0000010

position:180927:-1
position: 180927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181573:-1
position: 181573
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180927-181573:-1:exon

AVI_RS25325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25325
old locus tag: Avi_8247
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011970739.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: AVI_RS25325
subclass of: SO_0000673
so part of: AVI_RS25325
location: complement(180927..>181573)
location: region:180927-181573:-1
so has part: feature:180927-181573:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180927-181573:-1:exon

AVI_RS25330
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25330
so part of: sequence
location: 181547..181936
location: region:181547-181936:1
so has part: feature:181547-181936:1:exon
subclass of: SO_0000010

position:181547:1
position: 181547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181936:1
position: 181936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181547-181936:1:exon

AVI_RS25330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012655097.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MHLINEQGIVAESFEPGVRVVDVARRHGVIANQLSDWRRQVRDGILVLPFAAATTPSEHDGIEPAFVPLAIAADAPEPVNRLPLPKLASDRPKVQVLTLEIGSDVVMRVPNDVSVERVAALVRAVRGAP
SIO_010081: AVI_RS25330
subclass of: SO_0000673
so part of: AVI_RS25330
location: 181547..181936
location: region:181547-181936:1
so has part: feature:181547-181936:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181547-181936:1:exon

AVI_RS25335
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: tnpB
locus tag: AVI_RS25335
old locus tag: Avi_8248
so part of: sequence
location: 181933..182286
location: region:181933-182286:1
so has part: feature:181933-182286:1:exon
subclass of: SO_0000010

position:181933:1
position: 181933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182286:1
position: 182286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181933-182286:1:exon

AVI_RS25335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: tnpB
locus tag: AVI_RS25335
old locus tag: Avi_8248
inference: COORDINATES: protein motif:HMM:NF017528.2
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIVAGQRLPILIATRPVDFRCGHQALALMVQTELKLDPHSGITVIFRSKRGDRLKILVWDGRGMVLIYKILEQGSFAWPKVQDGTMRLSRGQYEAMFEGLDWRRVMAQRVTAPSAAG
SIO_010081: AVI_RS25335
subclass of: SO_0000673
so part of: AVI_RS25335
location: 181933..182286
location: region:181933-182286:1
so has part: feature:181933-182286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181933-182286:1:exon

AVI_RS25340
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25340
old locus tag: Avi_8249
so part of: sequence
location: 182348..184009
location: region:182348-184009:1
so has part: feature:182348-184009:1:exon
subclass of: SO_0000010

position:182348:1
position: 182348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184009:1
position: 184009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182348-184009:1:exon

AVI_RS25340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25340
old locus tag: Avi_8249
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612018.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MSQPIDLSLYPDLPSEVAKAFAEMQFELSVERAARQHEQAVVAEKDLFIAELKELIETLEGQVHEYRRAKFGPKSEKLDPAQMELALEELETAIAETQARIAAVEKKIEASAINPGEVGDPDKAVSRKERKARALPEHLPRVERVIEPESIVCPCGCGNMVRIGEERLDRVPARYEVIVTIRPKYACPKGRTGVVQAKAPAHLLEGSWPTEALLAEIAVSKHSEHMPLNRQAEVMARHGGPIDRPVLADWMGRTGSEIRSVVDHMAKQLLGESTRLYVNETTAPVLDPGRGKTKTGYLRAVLRDDRGWNGSAPSGVVFHYRPGRKGDYAAEILEGFNGTIQVNAYGGYSHLATSDRVGGDPWKLAFCWAHGRRKLIKAAPKSGSPIVDEALIRIAALYKIEDSIRGNEPEHRRAVRQELSLPLVDKFFTWIAAQAARVSRKSDLGKALAYMLTRQDGFRLFLDDSHVDIDSNLVENAIRRPAMNRRNALFAGHDEGGRNWARFASLIGTCKMNGIEPYAYLCDLFTRLANGHIAKDIDALMPWAYAARIKASQ
SIO_010081: AVI_RS25340
subclass of: SO_0000673
so part of: AVI_RS25340
location: 182348..184009
location: region:182348-184009:1
so has part: feature:182348-184009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182348-184009:1:exon

AVI_RS25345
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25345
old locus tag: Avi_8250
so part of: sequence
location: complement(184278..186821)
location: region:184278-186821:-1
so has part: feature:184278-186821:-1:exon
subclass of: SO_0000010

position:184278:-1
position: 184278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186821:-1
position: 186821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184278-186821:-1:exon

AVI_RS25345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25345
old locus tag: Avi_8250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011427346.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: two-component system VirA-like sensor kinase
translation: MVWDHLSPSRRVLLDIKSWSVLVLVMAAIFFAVLAIGSWQDNESNEAILTELQSIEVNCAMLQRNVLRAHAGLLRNYHPLIVPLGRMRTSVADLQQLLKQAGLGEAGEFSELLARMKRSVDATGAAVAAFGRQNVMFQDSVATFNQSIASLQSSLDTRDLNSLEVSELGYRMLQFSSQPNFELAREINQRLGRLQVSASRDTAGVQEIVRSARIILTLLPRLEGTIGVIQASETVANTKKLQRAYLEAYSLASAGEQRVRFFLGAVSVFFCFCIISLVRRLHLRTKVLTRRLDFEEVIKRIGLCFEDSAAAKPSLESSTNAALGIIQSFFAAHQCVLGLVDVNENDIAGTFFGNNPPPKWNERRVRDIASKVESEEGGRVFRDYPLRKTSCFGEDSPCLWVQLAFKVSDRIVAIFGLGFDREYLQPPTSCEMQLMELAAGCVSHYTVIRRKQSQRDILERRLKHAERLEAVGTLAGGIAHEFNNILGAVLGYAEMAHNVLRRRTHARDYIDHIISEGNRARLIVNQILALSRKRDRTTKPFDLSELVTVIAPSLRVGLPPGVELDFEFHGHPMVVEANPLEIEQILMNLCKNSAEACLGSGRVEVSARRSIIRKYKVLASGTIPTGEYVLLSVEDNGAGITEDALPHIFEPFFTTRARSGGTGLGLSTVHGHVSAMAGYIDVVSIVGRGTRFDLYLPPSSKQPVNSQSFFEPGRIPLGNGEIVAVVEPDIATLERYEEMIAALGYEPVGFNTLNGLIDWVLEGKEPDLVLIDQPSFLDEDGPVSLLSKLAKSPVIIVGENPKNVPLSADREGSARFLKKPISAKTLAYVVRANIRTQLRIARKAPTW
SIO_010081: AVI_RS25345
subclass of: SO_0000673
so part of: AVI_RS25345
location: complement(184278..186821)
location: region:184278-186821:-1
so has part: feature:184278-186821:-1:exon

WP_012649043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184278-186821:-1:exon

AVI_RS25350
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25350
old locus tag: Avi_8251
so part of: sequence
location: complement(187013..188221)
location: region:187013-188221:-1
so has part: feature:187013-188221:-1:exon
subclass of: SO_0000010

position:187013:-1
position: 187013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188221:-1
position: 188221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187013-188221:-1:exon

AVI_RS25350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25350
old locus tag: Avi_8251
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010892482.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome P450
translation: MISELNPENVSVAALDRFGHEIFKEWRPKRPFLHRQDGVYVVLRADDVLGLSSDPRTRQIETELMLNRGVNEGAVFDFVRYSMLFSNKETHRRRRSPFTRTFAFRMIENLRPQIRQLTEMLFRDLKELGSFNFVAEYSSKLPAVTIASLLGLPSSDIPYFTQLVYRVARCLSPSWRDADFPDIEKSAVEFKNYVQAVINDRRTDPRDNFLSSYINATREAEDLSPVEGLTQLMLIILAGTDTTKTGLTALTGQLLQHRQAWDALLKDVTLVPAAVEEGLRFEPPVGSYPRSARVDIDLDGFILPKGSLLALCTMSALRDEKHYAHPQLFDIHRKQMRWHMVFGAGEHRCLGEALARLEMQEGLATVLRHAPNLSIEGEWQGIQGHGGVRRIAEMRVGFMREN
SIO_010081: AVI_RS25350
subclass of: SO_0000673
so part of: AVI_RS25350
location: complement(187013..188221)
location: region:187013-188221:-1
so has part: feature:187013-188221:-1:exon

WP_012649044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187013-188221:-1:exon

AVI_RS25355
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25355
old locus tag: Avi_8253
so part of: sequence
location: 188557..189786
location: region:188557-189786:1
so has part: feature:188557-189786:1:exon
subclass of: SO_0000010

position:188557:1
position: 188557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189786:1
position: 189786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188557-189786:1:exon

AVI_RS25355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25355
old locus tag: Avi_8253
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015449381.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MLDNRHQLIAALISSLLSQRYSPVVVRNYCTYASGFLDYLGQRGIPVADVIDVQVEQYLRHAIVTFERERGRRPSARWHEVPRSGIHALLRLAHGQWPPAIKPICAADVARFAVCDEYEIWLREERGLARSSVAALMWEARNFLAWQIDCGSGGLAGLSIVAVDRYMDLRAAKLTRCSLKSVAERLRSLLRYLHITGRVTTDLSGHVIAPTLYAYEGVPSILERDQIAAVLETARADKTPAGLRDYAILQFLATYGLRSGEICNLRIEDIDWRTEAIHVRHHKTRASTSLPLMEPVGEALLAYLRSGRPVTDAREIFLRTRAPYRKLDKLYSVVRRLLRDAGVQPPGKCGPHIFRHARAVEMLRVAVPQKVIGDVLGHRSTGSTAPYLKLATEDLRAIALEVPGMEVLA
SIO_010081: AVI_RS25355
subclass of: SO_0000673
so part of: AVI_RS25355
location: 188557..189786
location: region:188557-189786:1
so has part: feature:188557-189786:1:exon

WP_012649045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188557-189786:1:exon

AVI_RS30785
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS30785
pseudo: true
so part of: sequence
location: <190428..190805
location: region:190428-190805:1
so has part: feature:190428-190805:1:exon
subclass of: SO_0000010

position:190428:1
position: 190428
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:190805:1
position: 190805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190428-190805:1:exon

AVI_RS30785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS30785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011746810.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AVI_RS30785
subclass of: SO_0000673
so part of: AVI_RS30785
location: <190428..190805
location: region:190428-190805:1
so has part: feature:190428-190805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190428-190805:1:exon

AVI_RS25370
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25370
old locus tag: Avi_8255
pseudo: true
so part of: sequence
location: complement(191131..>191613)
location: region:191131-191613:-1
so has part: feature:191131-191613:-1:exon
subclass of: SO_0000010

position:191131:-1
position: 191131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191613:-1
position: 191613
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191131-191613:-1:exon

AVI_RS25370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25370
old locus tag: Avi_8255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611465.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
SIO_010081: AVI_RS25370
subclass of: SO_0000673
so part of: AVI_RS25370
location: complement(191131..>191613)
location: region:191131-191613:-1
so has part: feature:191131-191613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:191131-191613:-1:exon

AVI_RS25375
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25375
old locus tag: Avi_8256
pseudo: true
so part of: sequence
location: complement(191686..>192555)
location: region:191686-192555:-1
so has part: feature:191686-192555:-1:exon
subclass of: SO_0000010

position:191686:-1
position: 191686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192555:-1
position: 192555
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191686-192555:-1:exon

AVI_RS25375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25375
old locus tag: Avi_8256
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011982903.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: reverse transcriptase domain-containing protein
SIO_010081: AVI_RS25375
subclass of: SO_0000673
so part of: AVI_RS25375
location: complement(191686..>192555)
location: region:191686-192555:-1
so has part: feature:191686-192555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:191686-192555:-1:exon

AVI_RS25380
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25380
old locus tag: Avi_8257
so part of: sequence
location: complement(192645..192974)
location: region:192645-192974:-1
so has part: feature:192645-192974:-1:exon
subclass of: SO_0000010

position:192645:-1
position: 192645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192974:-1
position: 192974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192645-192974:-1:exon

AVI_RS25380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25380
old locus tag: Avi_8257
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MQVGINRGGVAWIIDKYRALADTQELARARISPHILRHSKAMHLYEAGIPLPYIRDILGHVDLSTTEIYARASTEAKRKALEAAYVDVISEDMPEWSQDAGLLAWLTSL
SIO_010081: AVI_RS25380
subclass of: SO_0000673
so part of: AVI_RS25380
location: complement(192645..192974)
location: region:192645-192974:-1
so has part: feature:192645-192974:-1:exon

WP_012649049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192645-192974:-1:exon

AVI_RS30025
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS30025
old locus tag: Avi_8258
so part of: sequence
location: complement(192978..194041)
location: region:192978-194041:-1
so has part: feature:192978-194041:-1:exon
subclass of: SO_0000010

position:192978:-1
position: 192978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194041:-1
position: 194041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192978-194041:-1:exon

AVI_RS30025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS30025
old locus tag: Avi_8258
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012553005.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MGQAIGLREDFDGASLRRLARLSKSAPQARRLLALAQIYEGSSRSEAARIGGVTLQIVRDWVIRFNARGPDGLLDGKAPGKPSILNDAQRRALVEAVERGPIPAIHGVVRWRLIDLVYLLHEEFAVSLDETTVSRELKKLGYVKLTARPRHHAQNELAMETFKKGFAAEVAKVRTSLPKGTSIEVWFQDEARVGQKNTITRRWARRGTRPSAPKDQRTKSAYIFGAICPEQGKGAGLILPFCNTETMSLHLAEIALAVAPGAHAVVLMDQAGWHMTDKLEVPDNISIIALPAKCPELNPVENVWQFMRDNWLSNRVFTSHDNILDHCCEAWNKLVDQPWRIMTIGRRKWARQF
SIO_010081: AVI_RS30025
subclass of: SO_0000673
so part of: AVI_RS30025
location: complement(join(192978..193547,193550..194041))
location: region:192978-194041:-1
so has part: feature:193550-194041:-1:exon
so has part: feature:192978-193547:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193550-194041:-1:exon

position:193550:-1
position: 193550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192978-193547:-1:exon

position:193547:-1
position: 193547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AVI_RS25395
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25395
old locus tag: Avi_8259
so part of: sequence
location: complement(194083..194823)
location: region:194083-194823:-1
so has part: feature:194083-194823:-1:exon
subclass of: SO_0000010

position:194083:-1
position: 194083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194823:-1
position: 194823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194083-194823:-1:exon

AVI_RS25395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25395
old locus tag: Avi_8259
inference: COORDINATES: protein motif:HMM:NF024886.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MATDFALLLQRFLTSHLAGLRGASPNTVASYRDTFKLLVIYLRDQKAIPPEKLTLNRIDVEMITGFLNWLESRRQNSVSTRNQRLAAISSFYNWMQSQEPALMARCQDIMAIPVKKGAQACVHHLTVEQTRCLLNAPDRTTRSGRRDATILATLYDTGARVQELVDLTVRDVRLQKPAVITLTGKGRKTRHVPLGANTAALLASYLTEFRLDMPGRDGYPVFFNQQHAKLIPACVEADSGCGFPKR
SIO_010081: AVI_RS25395
subclass of: SO_0000673
so part of: AVI_RS25395
location: complement(194083..194823)
location: region:194083-194823:-1
so has part: feature:194083-194823:-1:exon

WP_012649050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194083-194823:-1:exon

AVI_RS25400
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25400
old locus tag: Avi_8260
so part of: sequence
location: complement(194813..195790)
location: region:194813-195790:-1
so has part: feature:194813-195790:-1:exon
subclass of: SO_0000010

position:194813:-1
position: 194813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195790:-1
position: 195790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194813-195790:-1:exon

AVI_RS25400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25400
old locus tag: Avi_8260
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MSAPLTMIDAVEAMVAQKRTVGYKYEVEEAVLYRFVAFTRNQFPGLETITEVSANAWIEAAQKRAVTPATLQGLTSPVRHLARWLILHDVAAYVLPTGVLRRPAAYIPHIYSDEELAAFFAQTDRCHYCSDVPLRHLVMPVLFRTIYACGLRCSEARLLRVEDVDLATGVLLIRDAKGGKDRQIPVSEPIRVRLAHYHAQFDWMGHEWFFPGRRGQRLRLSNVYNNFRRFLWQARISHGGRGHGPRVHDFRHSFAVHNLRNWFATGKDVGAMLPILQTYMGHYSIADTAYYLRLTAESYPHIVRRLDEAIGHVVPCLKGDLHHGN
SIO_010081: AVI_RS25400
subclass of: SO_0000673
so part of: AVI_RS25400
location: complement(194813..195790)
location: region:194813-195790:-1
so has part: feature:194813-195790:-1:exon

WP_012649051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194813-195790:-1:exon

AVI_RS25405
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25405
old locus tag: Avi_8262
so part of: sequence
location: complement(195790..196752)
location: region:195790-196752:-1
so has part: feature:195790-196752:-1:exon
subclass of: SO_0000010

position:196752:-1
position: 196752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195790-196752:-1:exon

AVI_RS25405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25405
old locus tag: Avi_8262
inference: COORDINATES: protein motif:HMM:NF012798.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MAHGAVLRRYDRRGDKLAAHQAELIGKFQAALRAEGCAVSTVRTYGTLAGEFLSFVDTRGRLTECDARTVEAFVATLSGYQAKTVEQKLCAVRSFLRYAERQGQVNADVLKAVPAVKSSKHARVPSVWDPADVARILDAIDQGNPSGKRDYAIITLVTRLGLRSIDVKRLELDDFDWPGNRLWVRQTKTGHRIQLPLLKDVGWAIINYIRHGRPSTDCRQVFLRHTTPVGPFSDQDHLHQILCKHARVARVTLSDHRRHGMHSLRHTLATRLMEGGTPIEEIADILGHQSVGTTGVYLKTSLGLLRQCALNPDATSEEVL
SIO_010081: AVI_RS25405
subclass of: SO_0000673
so part of: AVI_RS25405
location: complement(195790..196752)
location: region:195790-196752:-1
so has part: feature:195790-196752:-1:exon

WP_234665195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195790-196752:-1:exon

AVI_RS31300
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31300
so part of: sequence
location: complement(196721..197017)
location: region:196721-197017:-1
so has part: feature:196721-197017:-1:exon
subclass of: SO_0000010

position:196721:-1
position: 196721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197017:-1
position: 197017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196721-197017:-1:exon

AVI_RS31300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31300
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVALSALVVDLDRELLRLGYKDSTMIWYRQCWRRLETFFADLGVEEFSLEIAMAWVDAACDFFAKEQSGTLPADGRLFVSGRSDAGRLCGSRRCVASL
SIO_010081: AVI_RS31300
subclass of: SO_0000673
so part of: AVI_RS31300
location: complement(196721..197017)
location: region:196721-197017:-1
so has part: feature:196721-197017:-1:exon

WP_049777436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196721-197017:-1:exon

AVI_RS25410
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25410
old locus tag: Avi_8264
pseudo: true
so part of: sequence
location: complement(<197116..197853)
location: region:197116-197853:-1
so has part: feature:197116-197853:-1:exon
subclass of: SO_0000010

position:197116:-1
position: 197116
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:197853:-1
position: 197853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197116-197853:-1:exon

AVI_RS25410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25410
old locus tag: Avi_8264
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016241516.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: reverse transcriptase domain-containing protein
SIO_010081: AVI_RS25410
subclass of: SO_0000673
so part of: AVI_RS25410
location: complement(<197116..197853)
location: region:197116-197853:-1
so has part: feature:197116-197853:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197116-197853:-1:exon

AVI_RS30030
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS30030
pseudo: true
so part of: sequence
location: complement(<198496..199241)
location: region:198496-199241:-1
so has part: feature:198496-199241:-1:exon
subclass of: SO_0000010

position:198496:-1
position: 198496
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:199241:-1
position: 199241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198496-199241:-1:exon

AVI_RS30030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS30030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612098.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: AVI_RS30030
subclass of: SO_0000673
so part of: AVI_RS30030
location: complement(<198496..199241)
location: region:198496-199241:-1
so has part: feature:198496-199241:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198496-199241:-1:exon

AVI_RS30030
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 311402
locus tag: AVI_RS30030
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.1
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: AVI_RS30030
subclass of: SO_0000673
so part of: AVI_RS30030
location: complement(198841..198957)
location: region:198841-198957:-1
so has part: feature:198841-198957:-1:exon

position:198841:-1
position: 198841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198957:-1
position: 198957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198841-198957:-1:exon

AVI_RS25425
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25425
old locus tag: Avi_8269
so part of: sequence
location: 200377..200997
location: region:200377-200997:1
so has part: feature:200377-200997:1:exon
subclass of: SO_0000010

position:200377:1
position: 200377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200997:1
position: 200997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200377-200997:1:exon

AVI_RS25425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25425
old locus tag: Avi_8269
inference: COORDINATES: protein motif:HMM:NF014125.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RolB family protein
translation: MAVPRWAVRDLTQISSARELSLRLEQARNDFRATVGSICYFNASARTPGQFDDEYIMTDQSLTYVYADGVTAQSCAMNRLLPSSSSNFGAAATAIPPWLLDPPRLNRLLREGTDEGGLVNYYEGPHKNAFFLAIMRSCIFVRPGADEINGVSYDFFARSGNYTEQAEEEEEEEEEEEEEEVLDREFQLGNLVSYPIIAWGSCPNSA
SIO_010081: AVI_RS25425
subclass of: SO_0000673
so part of: AVI_RS25425
location: 200377..200997
location: region:200377-200997:1
so has part: feature:200377-200997:1:exon

WP_012649056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200377-200997:1:exon

AVI_RS25430
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25430
old locus tag: Avi_8271
so part of: sequence
location: complement(201537..202619)
location: region:201537-202619:-1
so has part: feature:201537-202619:-1:exon
subclass of: SO_0000010

position:201537:-1
position: 201537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202619:-1
position: 202619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201537-202619:-1:exon

AVI_RS25430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25430
old locus tag: Avi_8271
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649057.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD/NADP-dependent octopine/nopaline dehydrogenase family protein
translation: MSKVAILGAGNLALTFAGDIARRLNEEVTAVIWAPTTNRRNFNEVRGIGTLELVGPDYEGAFTPQLEDDLEAAILDAEFIFLTVPTLAQEGILRELVKFDLSETVLIALPGSATSLTCKNILFPSHSPVAVIESTTSPYACRRIGERVHMLGVKACFEVAATSLLSNDLTSRFEALFPNRLQWYKDAASIFFSNTNPVVHPPGILVAKDAIENGMSPLPKFYREFVPAAIERVQELDNERLEIIAALGLESETGFTYSKKWYGGQATEWKEFFETYEGYAEVGTPTTMHHRYLTEDVKHIMVLWVQIAEVAGVQVPAMKSVIKEAGNVLYEDLFMTGRTLASMNLGGANPYRIVDALNGN
SIO_010081: AVI_RS25430
subclass of: SO_0000673
so part of: AVI_RS25430
location: complement(201537..202619)
location: region:201537-202619:-1
so has part: feature:201537-202619:-1:exon

WP_012649057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201537-202619:-1:exon

AVI_RS25435
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25435
old locus tag: Avi_8272
pseudo: true
so part of: sequence
location: <203020..203541
location: region:203020-203541:1
so has part: feature:203020-203541:1:exon
subclass of: SO_0000010

position:203020:1
position: 203020
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:203541:1
position: 203541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203020-203541:1:exon

AVI_RS25435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25435
old locus tag: Avi_8272
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004675975.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: serine recombinase
SIO_010081: AVI_RS25435
subclass of: SO_0000673
so part of: AVI_RS25435
location: <203020..203541
location: region:203020-203541:1
so has part: feature:203020-203541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203020-203541:1:exon

AVI_RS25440
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25440
pseudo: true
so part of: sequence
location: 203864..205047
location: region:203864-205047:1
so has part: feature:203864-205047:1:exon
subclass of: SO_0000010

position:203864:1
position: 203864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205047:1
position: 205047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203864-205047:1:exon

AVI_RS25440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611260.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: AVI_RS25440
subclass of: SO_0000673
so part of: AVI_RS25440
location: 203864..205047
location: region:203864-205047:1
so has part: feature:203864-205047:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203864-205047:1:exon

AVI_RS25445
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: ligD
locus tag: AVI_RS25445
old locus tag: Avi_8275
pseudo: true
so part of: sequence
location: <205113..206207
location: region:205113-206207:1
so has part: feature:205113-206207:1:exon
subclass of: SO_0000010

position:205113:1
position: 205113
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:206207:1
position: 206207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205113-206207:1:exon

AVI_RS25445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: ligD
locus tag: AVI_RS25445
old locus tag: Avi_8275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015241891.1
GO process: GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA ligase D
SIO_010081: AVI_RS25445
subclass of: SO_0000673
so part of: AVI_RS25445
location: <205113..206207
location: region:205113-206207:1
so has part: feature:205113-206207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205113-206207:1:exon

AVI_RS30790
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS30790
pseudo: true
so part of: sequence
location: complement(206271..>206498)
location: region:206271-206498:-1
so has part: feature:206271-206498:-1:exon
subclass of: SO_0000010

position:206271:-1
position: 206271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206498:-1
position: 206498
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206271-206498:-1:exon

AVI_RS30790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS30790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017996667.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AVI_RS30790
subclass of: SO_0000673
so part of: AVI_RS30790
location: complement(206271..>206498)
location: region:206271-206498:-1
so has part: feature:206271-206498:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206271-206498:-1:exon

AVI_RS31600
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31600
pseudo: true
so part of: sequence
location: <206502..206642
location: region:206502-206642:1
so has part: feature:206502-206642:1:exon
subclass of: SO_0000010

position:206502:1
position: 206502
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:206642:1
position: 206642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206502-206642:1:exon

AVI_RS31600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012650495.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: AVI_RS31600
subclass of: SO_0000673
so part of: AVI_RS31600
location: <206502..206642
location: region:206502-206642:1
so has part: feature:206502-206642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206502-206642:1:exon

AVI_RS30035
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS30035
old locus tag: Avi_8277
pseudo: true
so part of: sequence
location: <206694..207011
location: region:206694-207011:1
so has part: feature:206694-207011:1:exon
subclass of: SO_0000010

position:206694:1
position: 206694
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:207011:1
position: 207011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206694-207011:1:exon

AVI_RS30035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS30035
old locus tag: Avi_8277
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019052766.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: AVI_RS30035
subclass of: SO_0000673
so part of: AVI_RS30035
location: <206694..207011
location: region:206694-207011:1
so has part: feature:206694-207011:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206694-207011:1:exon

AVI_RS25455
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25455
old locus tag: Avi_8278
so part of: sequence
location: 207335..207958
location: region:207335-207958:1
so has part: feature:207335-207958:1:exon
subclass of: SO_0000010

position:207335:1
position: 207335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207958:1
position: 207958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207335-207958:1:exon

AVI_RS25455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25455
old locus tag: Avi_8278
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007812053.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD family hydrolase
translation: MDAYKLIIFDFDGTLADSGGWMISALREMSERHRFITPNDTQIEYLRGLSVCQVLKWLRVPIWRIPLIVKDLRELAREATFHIFPRTEKVLFLLQDQGVELAILSSNSIENIQRVLGPLEGYFAHIEGSSPIFGKGKRINKILRRCNKSRNEVLLVGDEVRDIEAATSQNIASAAVTWGYAKREALAYSNPTHILDDIEELIDLKPI
SIO_010081: AVI_RS25455
subclass of: SO_0000673
so part of: AVI_RS25455
location: 207335..207958
location: region:207335-207958:1
so has part: feature:207335-207958:1:exon

WP_012649062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207335-207958:1:exon

AVI_RS25460
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25460
old locus tag: Avi_8279
so part of: sequence
location: complement(208159..209601)
location: region:208159-209601:-1
so has part: feature:208159-209601:-1:exon
subclass of: SO_0000010

position:208159:-1
position: 208159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209601:-1
position: 209601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208159-209601:-1:exon

AVI_RS25460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25460
old locus tag: Avi_8279
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006871394.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS4 family transposase
translation: MSVRDDVMADSDGHWSKQEIDAGCFKDVRLGRRCTELLRQLGEHMGGSIPFACQDWANTKAAYRFFSNPNVEEGDILNGHFAATAQRYDASQGPILVLRDTTEFTYQRRNPHAVGFTKSVNSGRDKQERLRHHTVCGILMHSSLAVTLDGLPLGLAAVKFWSRDKFKGTAQLKRKINPTRVPIETKESIRWLENLRQSVGLLGQPDRCIHVGDRESDIYELYCLTKELGTHFVVRTVVDRLAGNGDHTISAEMRDVETAGRHLIEVRADTDEVTKVHLDIRFKRIRVLPPIGKMKRYPALDLTVIHAVEPNPPPGSKRIEWKLLTDLEVHSCEDAVEKIKWYAMRWKIEVFHKILKSGCRAEDARLRTADRLANLVAMFCIMSWRVLWLTMLARSAPEIPPTAALTEQEIEILDQMVSNAGNRQATPGSLNFYLTKLARLGGYLARTSDPPPGNTVVWRGLSRLTDIRLGTEIAATLRCG
SIO_010081: AVI_RS25460
subclass of: SO_0000673
so part of: AVI_RS25460
location: complement(208159..209601)
location: region:208159-209601:-1
so has part: feature:208159-209601:-1:exon

WP_234618232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208159-209601:-1:exon

AVI_RS25465
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25465
old locus tag: Avi_8280
pseudo: true
so part of: sequence
location: 209856..>210119
location: region:209856-210119:1
so has part: feature:209856-210119:1:exon
subclass of: SO_0000010

position:209856:1
position: 209856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210119:1
position: 210119
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209856-210119:1:exon

AVI_RS25465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25465
old locus tag: Avi_8280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558310.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AVI_RS25465
subclass of: SO_0000673
so part of: AVI_RS25465
location: 209856..>210119
location: region:209856-210119:1
so has part: feature:209856-210119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209856-210119:1:exon

AVI_RS25470
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25470
old locus tag: Avi_8282
so part of: sequence
location: complement(210169..211389)
location: region:210169-211389:-1
so has part: feature:210169-211389:-1:exon
subclass of: SO_0000010

position:210169:-1
position: 210169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211389:-1
position: 211389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210169-211389:-1:exon

AVI_RS25470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25470
old locus tag: Avi_8282
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014242209.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MARRKEPIIPDSILDQLLAGSDAKTAFESNGLLDQLKKALAERALNAEMDHHLSGETTPGNSRNGYGRKTVLTDSGSLELSIPRDRQSSFDPQLLAKYQRRFPGFDEKIVSMYARGMSTREIVGHVQELYGIDVSPDLISAVTDAVLDEVAIWQARPLEPVYPLVFFDALRVKIRDEGHVRNKAVHIALGVRGDGTKEILGLWIETNEGAKFWLRVMNELKNRGVEDILIAVVDGLKGFPEAINAVFAETTVQTCIVHLLRNSLDFASWKDRKDLARELKSIYGAIDDKAAEAALTTFEGGFWGRKFPAVAQIWRRAWQEVIPFFAFPKDVRRIIYTTNAIEALNSKLRRAVRARGHFPNDDGATKLLYLVLNRSEKEWKMPPREWAMAKSQFSILFADRFQAARA
SIO_010081: AVI_RS25470
subclass of: SO_0000673
so part of: AVI_RS25470
location: complement(210169..211389)
location: region:210169-211389:-1
so has part: feature:210169-211389:-1:exon

WP_012649065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210169-211389:-1:exon

AVI_RS30040
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS30040
pseudo: true
so part of: sequence
location: complement(<211446..>211582)
location: region:211446-211582:-1
so has part: feature:211446-211582:-1:exon
subclass of: SO_0000010

position:211446:-1
position: 211446
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:211582:-1
position: 211582
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211446-211582:-1:exon

AVI_RS30040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS30040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611229.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: AVI_RS30040
subclass of: SO_0000673
so part of: AVI_RS30040
location: complement(<211446..>211582)
location: region:211446-211582:-1
so has part: feature:211446-211582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211446-211582:-1:exon

AVI_RS25475
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25475
old locus tag: Avi_8284
pseudo: true
so part of: sequence
location: 211642..>212205
location: region:211642-212205:1
so has part: feature:211642-212205:1:exon
subclass of: SO_0000010

position:211642:1
position: 211642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212205:1
position: 212205
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211642-212205:1:exon

AVI_RS25475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25475
old locus tag: Avi_8284
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012553437.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: AVI_RS25475
subclass of: SO_0000673
so part of: AVI_RS25475
location: 211642..>212205
location: region:211642-212205:1
so has part: feature:211642-212205:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211642-212205:1:exon

AVI_RS31605
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31605
old locus tag: Avi_8285
pseudo: true
so part of: sequence
location: complement(<212203..212795)
location: region:212203-212795:-1
so has part: feature:212203-212795:-1:exon
subclass of: SO_0000010

position:212203:-1
position: 212203
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:212795:-1
position: 212795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212203-212795:-1:exon

AVI_RS31605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31605
old locus tag: Avi_8285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611348.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: AVI_RS31605
subclass of: SO_0000673
so part of: AVI_RS31605
location: complement(<212203..212795)
location: region:212203-212795:-1
so has part: feature:212203-212795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212203-212795:-1:exon

AVI_RS25485
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: iaaH
locus tag: AVI_RS25485
old locus tag: Avi_8287
so part of: sequence
location: complement(213627..215015)
location: region:213627-215015:-1
so has part: feature:213627-215015:-1:exon
subclass of: SO_0000010

position:213627:-1
position: 213627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215015:-1
position: 215015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213627-215015:-1:exon

AVI_RS25485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: iaaH
locus tag: AVI_RS25485
old locus tag: Avi_8287
inference: COORDINATES: protein motif:HMM:NF005688.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: indoleacetamide hydrolase
translation: MVEISSISQTLRALRRKQYSCRDLVESLVSRSESATHLNAFAATDWLHLRNEADRVDRNGSGGVGLMGIPLCFKANIATGIFPTSAGTQGLLRHKPAIPAKIVERLHSAGALIGASGNMHELSFGITNDNKTFGPARNPWNQALISGGSSGGVAVSVAANLMLGGIGTDTGASVRLPAALCGVVGFRPTFGNYPTDGIVPVSPSRDTPGLIVRSVEDAVLLDRIIRNKCPTQNMSLKGLRLGLPRSHFFDNLEPHVAAASERAIRRLATNQMTFVEADIPNVAELTRKVSLPVAIYEFPRALMAYLSFHGIGNTFDELIQNIQDPQVYDLVQSQLSKGLISESVYRRALRCYKPRLKATYENYYSSNGLDAVLFPSVPLTAKPVGLQTTLVHNGVETDTFGIFVRNLDPSSNIGLPSLSVPVSLTPDRLPVGIQIEGPFGSDDMVLAIGRAVEEMVKFGQEY
SIO_010081: AVI_RS25485
subclass of: SO_0000673
so part of: AVI_RS25485
location: complement(213627..215015)
location: region:213627-215015:-1
so has part: feature:213627-215015:-1:exon

WP_012649066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213627-215015:-1:exon

AVI_RS25490
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25490
old locus tag: Avi_8288
so part of: sequence
location: 215346..217517
location: region:215346-217517:1
so has part: feature:215346-217517:1:exon
subclass of: SO_0000010

position:215346:1
position: 215346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217517:1
position: 217517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215346-217517:1:exon

AVI_RS25490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25490
old locus tag: Avi_8288
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649067.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MANFFYSRITNRSYSTKNLLNIEDKGRLKDELEKTRQTNICEICLHPRGHRASVCRQILMGFAYTSKTVLEGLLSTMPHDDAPLGKIFVTDLPPYDEQVPQVLLMQAAALVTSYEYSFEDLAYFLVLPLQMALMQKSPSLGKDFPVISGYSITKDSVHSPVAFGRNLMPRGVSCEFPQIDVLYDYRGFLEGGAFSEGVTSFPKETKKPKVAVIGAGISGLVSATLLLRNGIDDVTIFEAKNVVGGRAHTHFFKGEPSVCAELGAMRFPRSQACLFYLLEYLGINAMTKFPNPGTVDTGLYYRGRSYNWKAHSLPPAIFNRVHKGWRTFLHAGFVDGVAAFASPFTLTECLRLRNYEFASSLWQKWLDAFSSETFSSGIERIFRGAHPPGGEKWTRDVDMELFKELGVGSGGFGPVFGCGFIEILRLIVNGYEDNVMLLLDGIEEIPRRLSQQKVGSYSIRDRIIHKEVKEIIRTESGISLAIGEGMHATFDRVIVTSGFTNIQLRHLLTNDDSFFSYDVNQAIENSHMTGSSKLFVLTQNKFWKAEELPSCILTTGVAKAVYCLDYEPDKPSGKGLVLLSYTWEDDSHKLLTFDKGERFQILKRDLAKSYPRFADLLEPADGDYDNNIIQHDWILDPYAGGAFKLNRRCEDVYSKRLFFQPLRLNGEPDGRVCLAGCSCSFSGGWVEGAIQTACNAAMATIRDAGGLISGDNPLTNEFVNYHY
SIO_010081: AVI_RS25490
subclass of: SO_0000673
so part of: AVI_RS25490
location: 215346..217517
location: region:215346-217517:1
so has part: feature:215346-217517:1:exon

WP_012649067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215346-217517:1:exon

AVI_RS25495
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25495
so part of: sequence
location: 218556..218801
location: region:218556-218801:1
so has part: feature:218556-218801:1:exon
subclass of: SO_0000010

position:218556:1
position: 218556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218801:1
position: 218801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218556-218801:1:exon

AVI_RS25495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25495
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQFIRLRLAGGLGSTAWMTVRSKAGYRFFLPTGGRTWIDSFKIAHFSRDFLLDQRQVCQRREFSSEVRMAGNDLAAAVDHD
SIO_010081: AVI_RS25495
subclass of: SO_0000673
so part of: AVI_RS25495
location: 218556..218801
location: region:218556-218801:1
so has part: feature:218556-218801:1:exon

WP_139191521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218556-218801:1:exon

AVI_RS30055
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS30055
old locus tag: Avi_8291
so part of: sequence
location: complement(218818..219881)
location: region:218818-219881:-1
so has part: feature:218818-219881:-1:exon
subclass of: SO_0000010

position:218818:-1
position: 218818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219881:-1
position: 219881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218818-219881:-1:exon

AVI_RS30055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS30055
old locus tag: Avi_8291
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012553005.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MGQAIGLREDFDGASLRRLARLSKSAPQARRLLALAQIYEGSSRSEAARIGGVTLQIVRDWVIRFNARGPDGLLDGKAPGKPSILNDAQRRALVEAVERGPIPAIHGVVRWRLIDLVYLLHEEFAVSLDETTVSRELKKLGYVKLTARPRHHAQNELAMETFKKGFAAEVAKVRTSLPKGTSIEVWFQDEARVGQKNTITRRWARRGTRPSAPKDQRTKSAYIFGAICPEQGKGAGLILPFCNTETMSLHLAEIALAVAPGAHAVVLMDQAGWHMTDKLEVPDNISIIALPAKCPELNPVENVWQFMRDNWLSNRVFTSHDNILDHCCEAWNKLVDQPWRIMTIGRRKWARQF
SIO_010081: AVI_RS30055
subclass of: SO_0000673
so part of: AVI_RS30055
location: complement(join(218818..219387,219390..219881))
location: region:218818-219881:-1
so has part: feature:219390-219881:-1:exon
so has part: feature:218818-219387:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219390-219881:-1:exon

position:219390:-1
position: 219390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218818-219387:-1:exon

position:219387:-1
position: 219387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AVI_RS31610
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31610
old locus tag: Avi_8292
so part of: sequence
location: complement(219847..220458)
location: region:219847-220458:-1
so has part: feature:219847-220458:-1:exon
subclass of: SO_0000010

position:219847:-1
position: 219847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220458:-1
position: 220458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219847-220458:-1:exon

AVI_RS31610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31610
old locus tag: Avi_8292
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: transposase
translation: MTQRQAAKRFNVPPDSVAKMVAYSTPPDYQGRSPILRPKLDAFVSTIEHWPDEDLKVPRKQQCTTKLVFDRLYEKCGLTDGATIIKDYMRERDQRRHEVFAPLSHPPRHPQADFGEATGDMLQPDVLVAMLRLNDLGRSAKRLSKEFGCGHQDLWLRGYVDLYQPALRLTQVVDSQSDESVNQWRPASKGRGDGTSDRLAGRF
SIO_010081: AVI_RS31610
subclass of: SO_0000673
so part of: AVI_RS31610
location: complement(219847..220458)
location: region:219847-220458:-1
so has part: feature:219847-220458:-1:exon

WP_012649068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219847-220458:-1:exon

AVI_RS25515
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25515
old locus tag: Avi_8294
so part of: sequence
location: 221625..222335
location: region:221625-222335:1
so has part: feature:221625-222335:1:exon
subclass of: SO_0000010

position:221625:1
position: 221625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222335:1
position: 222335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221625-222335:1:exon

AVI_RS25515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25515
old locus tag: Avi_8294
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032488268.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isopentenyl transferase family protein
translation: MEAHLIFGPTSTGKTSVAIALAKRTGFPVIVLDRIQCYSQLSVGGGRPSAAEFQGTRRIYLIEGSLDEGVISAERAHECLVAAVEAHKPEGGVILEGGSISLFKRMAQSSYWNCGFTWHVTRLHLGGEEIFLAAAKKRINQMMQPDEQGNSFLGELVSVWKTTALRATLEGICGYRYAIEFAGKQGLEMDALTSLNRRQLEQLVHGMAHEYLCYARQQEQELPLPSLAGGEGPPFQ
SIO_010081: AVI_RS25515
subclass of: SO_0000673
so part of: AVI_RS25515
location: 221625..222335
location: region:221625-222335:1
so has part: feature:221625-222335:1:exon

WP_012649069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221625-222335:1:exon

AVI_RS31305
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS31305
so part of: sequence
location: complement(223932..224105)
location: region:223932-224105:-1
so has part: feature:223932-224105:-1:exon
subclass of: SO_0000010

position:223932:-1
position: 223932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224105:-1
position: 224105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223932-224105:-1:exon

AVI_RS31305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS31305
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNEFTNAQTNKDDLAINPANKRRQGLREPRILLAIIGHLNVLLFLLLPTPHKDDLGQ
SIO_010081: AVI_RS31305
subclass of: SO_0000673
so part of: AVI_RS31305
location: complement(223932..224105)
location: region:223932-224105:-1
so has part: feature:223932-224105:-1:exon

WP_156583134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223932-224105:-1:exon

AVI_RS25530
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: traR
locus tag: AVI_RS25530
old locus tag: Avi_8300
so part of: sequence
location: complement(225258..225950)
location: region:225258-225950:-1
so has part: feature:225258-225950:-1:exon
subclass of: SO_0000010

position:225258:-1
position: 225258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225950:-1
position: 225950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225258-225950:-1:exon

AVI_RS25530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: traR
locus tag: AVI_RS25530
old locus tag: Avi_8300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012654946.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator TraR
translation: MDKLTDLAAIEGDECILKTGLADIADHFGFTGYAYLHIQHRHITAVTNYHPEWQSVYFDKKFDALDPVVKRARSRKHIFTWSGEHERPTLSKDERAFYAHAADFGIRSGITIPIKTANGSMSMFTLASEKPVIDLDREIDAVAAAGTIGQIHARISFLRTTPTAEDAAWLDPKEATYLRWIAVGKTMEEIADVEGVKYNSVRVKLREAMKRFDVRSKAHLTALAIRRRLI
SIO_010081: AVI_RS25530
subclass of: SO_0000673
so part of: AVI_RS25530
location: complement(225258..225950)
location: region:225258-225950:-1
so has part: feature:225258-225950:-1:exon

WP_012649073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225258-225950:-1:exon

AVI_RS25535
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25535
old locus tag: Avi_8301
so part of: sequence
location: complement(226174..227568)
location: region:226174-227568:-1
so has part: feature:226174-227568:-1:exon
subclass of: SO_0000010

position:226174:-1
position: 226174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227568:-1
position: 227568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226174-227568:-1:exon

AVI_RS25535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25535
old locus tag: Avi_8301
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014492358.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MTRELIDIVIIGAGPAGMSAAVEARNAGLSVTLIDEGIGAGGQIYRSVLNERPDLGTILGPDYLAGRQLAEDFHACGATYLPRTTAFMIEQTSEQLSIGISAAGRARFIGARFVIIATGALERPFPIKGWTLPGVMTAGAAQTMLKASGTVPGGSTCLAGCGPLLYLLAAQYIRAGVNVSAVLDTTPWSNAIRALPFAPAFLATPYFRKGIKLMREVQAKVRVVRGVSTLEAVGENDLTSVKYTLRGKSHTVEAETLLLHQGVVPQVNLAMSVGVRHDWNDERLAFEPVLDDCGQTSVRNLFIAGDSASISGAEAASCRGQLVVAGILKMLDNKSRDASKSEAAARKQLRKASRGRLFLEKLYRPAPQFRMPADDVIVCRCEEVRAGEIRAIAARGAKGPNQAKAFSRAGMGPCQGRSCGLTVCELIGDATAQPPGQVGYMNIRAPVKPVTLGEMARSQDYPSD
SIO_010081: AVI_RS25535
subclass of: SO_0000673
so part of: AVI_RS25535
location: complement(226174..227568)
location: region:226174-227568:-1
so has part: feature:226174-227568:-1:exon

WP_012649074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226174-227568:-1:exon

AVI_RS25540
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25540
so part of: sequence
location: complement(227565..227870)
location: region:227565-227870:-1
so has part: feature:227565-227870:-1:exon
subclass of: SO_0000010

position:227565:-1
position: 227565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227870:-1
position: 227870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227565-227870:-1:exon

AVI_RS25540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011581267.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (2Fe-2S)-binding protein
translation: MFRHLSEAKVTVCLTVDGHLVAASPDDTVATALLIAGVTPFRKTPVSGAPRAPYCGMGVCFDCLVTIDGEANRQACLTPVREGMTVTTGVPGPSHKRNTRA
SIO_010081: AVI_RS25540
subclass of: SO_0000673
so part of: AVI_RS25540
location: complement(227565..227870)
location: region:227565-227870:-1
so has part: feature:227565-227870:-1:exon

WP_041699529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227565-227870:-1:exon

AVI_RS25545
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25545
old locus tag: Avi_8303
so part of: sequence
location: complement(227851..228978)
location: region:227851-228978:-1
so has part: feature:227851-228978:-1:exon
subclass of: SO_0000010

position:227851:-1
position: 227851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228978:-1
position: 228978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227851-228978:-1:exon

AVI_RS25545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25545
old locus tag: Avi_8303
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014199017.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-binding oxidoreductase
translation: MNSNRDESDVVVIGGGVVGMTLAYGLSQRNQSVIVLDEGDDAFRASRGNFALIWVHGKGLENPAYARWSATSANLWESFASELSDEAEMPLFYSRPGGFIVCLSEDELEQRAFALRRLHNIAPDTASFEILDHAQMKKMMPGIGPDVVGGTYSAADGHINALRLLGALHKVANQRGVSYRAGEHVATITPSSSGFRVRSASGEVSCNKIVLAAGLGNKDLAPMVGLTAPVAPERGQIIVTEKLEHFLDYPTGSVRQTNEGGVLIGDSKEDAGFDKSTDSRTLATIAKRAVQTFPRLASAQIVRTWGALRVMSPDGYPIYDESITCPGAYVVTCHSGITLAAAHTRIIAEAIAAGDWPAVLDPFSARRLAHVPASE
SIO_010081: AVI_RS25545
subclass of: SO_0000673
so part of: AVI_RS25545
location: complement(227851..228978)
location: region:227851-228978:-1
so has part: feature:227851-228978:-1:exon

WP_041699620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227851-228978:-1:exon

AVI_RS25550
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25550
old locus tag: Avi_8304
so part of: sequence
location: complement(228990..229787)
location: region:228990-229787:-1
so has part: feature:228990-229787:-1:exon
subclass of: SO_0000010

position:228990:-1
position: 228990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229787:-1
position: 229787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228990-229787:-1:exon

AVI_RS25550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25550
old locus tag: Avi_8304
EC number: 7.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011808014.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MKNGPIALLFNTLFVIFLLAPMVLVCLIAFTPENYLALPTNGFSLRWFQRLTERPEFFESFKTSVGIALASTVIALLFAVPAGLAIARYRFLGRAALNALFLSPLMLPHVVLGIAFLRFLTEIGISGTTTGLIIGHIVIVFPFAMRMILASASGMDMRIEDAAASLGAGRLTIYKRIILPLIVPGIASGFALSFIQSFDETTMTIFVASPTTTTLPVQMFNYIQDNIDPLICAVSALLILFTVILMVILDRLYGLERLFVGEGQA
SIO_010081: AVI_RS25550
subclass of: SO_0000673
so part of: AVI_RS25550
location: complement(228990..229787)
location: region:228990-229787:-1
so has part: feature:228990-229787:-1:exon

WP_012649076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228990-229787:-1:exon

AVI_RS25555
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25555
old locus tag: Avi_8305
so part of: sequence
location: complement(229784..230641)
location: region:229784-230641:-1
so has part: feature:229784-230641:-1:exon
subclass of: SO_0000010

position:229784:-1
position: 229784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230641:-1
position: 230641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229784-230641:-1:exon

AVI_RS25555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25555
old locus tag: Avi_8305
EC number: 7.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007614356.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSVRREAYILTTPAALLFLGIVAVPLVMTVILSLNEWSSTEGIIPVLVTKNYREIFSDSYFAEIFFRTLRISLLVTLTSILIGVPEAYILRRMREPWRSMMILVVIGPLLVSVVARTLGWALILAGNGILSQSLQKLGLVNAPVSLMFTETGVVIALTHVLVPFMVLAVWASLGRMDPSTERAASSLGAGPATIFRRIVLPQAMPGILSGSIVVFTLSASAFATPAIIGGRRLKVAATLAYDEFLNTLNWPLGAAIAVLLLIGIVFLVIGWNRLVERRYSQVFSS
SIO_010081: AVI_RS25555
subclass of: SO_0000673
so part of: AVI_RS25555
location: complement(229784..230641)
location: region:229784-230641:-1
so has part: feature:229784-230641:-1:exon

WP_012649077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229784-230641:-1:exon

AVI_RS25560
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25560
old locus tag: Avi_8306
so part of: sequence
location: complement(230638..231681)
location: region:230638-231681:-1
so has part: feature:230638-231681:-1:exon
subclass of: SO_0000010

position:230638:-1
position: 230638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231681:-1
position: 231681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230638-231681:-1:exon

AVI_RS25560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25560
old locus tag: Avi_8306
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014439754.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSYLRLDRLRKVYGPAVAVDGINLNVEKGEFVSLLGPSGCGKTTTLQMIAGFVEPTSGSISLDGAELLKLPPNRRGLGIVFQSYALFPHMTVAQNLSFGLEMRGVSKAEITKRVSEMLDIVGLSDKAARYPRQMSGGQQQRVALGRALIIKPAILLLDEPLSNLDAKMREEMQIELRQIQQTLGTTTVLVTHDQHEALALSDRIVVMSAAKVEQIGTPQDVYETPATPFVASFLGKTNVFEGTTSADGLTFGDYTVPFSRTHEGRVSFSVRPEKISMSSETQPGLRGRVKTRVFQGDHWLLQIDTAAGRAIVVSPNNGTFIPLENAEVCLTVKPEDLIVSKAAGERI
SIO_010081: AVI_RS25560
subclass of: SO_0000673
so part of: AVI_RS25560
location: complement(230638..231681)
location: region:230638-231681:-1
so has part: feature:230638-231681:-1:exon

WP_012649078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230638-231681:-1:exon

AVI_RS25565
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25565
old locus tag: Avi_8307
so part of: sequence
location: complement(231828..232805)
location: region:231828-232805:-1
so has part: feature:231828-232805:-1:exon
subclass of: SO_0000010

position:231828:-1
position: 231828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232805:-1
position: 232805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231828-232805:-1:exon

AVI_RS25565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25565
old locus tag: Avi_8307
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012042070.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MASGAVAQDQLIIAGYGGSTETIIREKILPKFEAANNVKVTYVAGNSTDTLAKLQAQNANQEIDVALIDDGPMARAVSLGFCAPIAGVDFSTLYDTAAFPDHKASGLGIVATGLMYNKKVFADNGWAAPTSWNDLKDPKFAGKVVIPPMNNGYGLLTVVMLARMNGGGEKNIDPGFAAFKNDINKNVIAYEPSPAKMTELFQTGQAVLGVWGTARVQALAATGFPVDFVYPVEGAPAVMTAICPVAKKSVSPLAQAFVKTMLSKEAQEILAEEAGSAPVLKDAVVKSPGMMPYGDAAKKLVTADWETINAARDDWNKHWTREIER
SIO_010081: AVI_RS25565
subclass of: SO_0000673
so part of: AVI_RS25565
location: complement(231828..232805)
location: region:231828-232805:-1
so has part: feature:231828-232805:-1:exon

WP_162292251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231828-232805:-1:exon

AVI_RS25570
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25570
old locus tag: Avi_8309
so part of: sequence
location: 232946..233869
location: region:232946-233869:1
so has part: feature:232946-233869:1:exon
subclass of: SO_0000010

position:232946:1
position: 232946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233869:1
position: 233869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232946-233869:1:exon

AVI_RS25570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25570
old locus tag: Avi_8309
inference: COORDINATES: protein motif:HMM:NF015431.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MHKYYGGMSNFGRQIEAFRAVMLTGGMTTAAETLRITQPAISRLIRDLEDDLKIALFHRRGNQITPTVEATAFLAEVERSYLGMDQLRTFAVDLRNSLTGSLRIAALPAMALGFMPYCLAKFSGTRPKLSITLDGIPSHLVLERVAGGQFELGFAAVPADRPMLNTTPIKARAVVVMPEGHPLAKNETVSADQLRNERIVMLDRGNYLRHTIERALGTRAGSPGAIETPLSAIACSFVARGLGVTIIDAFTAINFLGRGIEARLLVPELDFGFAMVTAQQRPMSQLARQFAQEIHLLAEEYQSPIFG
SIO_010081: AVI_RS25570
subclass of: SO_0000673
so part of: AVI_RS25570
location: 232946..233869
location: region:232946-233869:1
so has part: feature:232946-233869:1:exon

WP_139192341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232946-233869:1:exon

AVI_RS25575
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25575
old locus tag: Avi_8310
so part of: sequence
location: complement(234022..235884)
location: region:234022-235884:-1
so has part: feature:234022-235884:-1:exon
subclass of: SO_0000010

position:234022:-1
position: 234022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235884:-1
position: 235884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234022-235884:-1:exon

AVI_RS25575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25575
old locus tag: Avi_8310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012321501.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MITPPMPSLETRSSPEVVQPVLSVADLKVSFQMPNGWKPVVHGISFDIKPRETVAIVGESGSGKSVTSLAIMRLLPAEQSRIEGRIHLHGKELLSLQPSEMREIRGRDIGMIFQEPMTSLNPSMKIGIQISEALISHRGMDWDEAAKESVRLMERVRIPVASRRFHDYPHRLSGGMRQRIMIAMALACSPRLLIADEPTTALDVTIQAEILSLMRELQEEEDMSVLFITHDMGVVAETADRTLVMYHGNMVEQGSTERLFSKAEHPYSRALISAVPQLGSMKDITNPVRYPVIDVKTGEETIGARAMQSSPKSEQVPLLQVQDLQVRFNIHSGLLGRVSGRVHAVENVSFDLQERETLAIVGESGSGKSTIGRAITRLVNTVGGDVRLRGKSVLDLKGETARQMRQQVQMIFQDPYASLDPRKSVRKAIAEPILAHSLARASEIDGIVSDLLMKVGLPPEVMHRRPHEFSGGQRQRICIARALALKPAILVADEAVSALDVSIKAQVINLMMDLQQELGLSYLFISHDMAAVERISHRVAVMYLGEIVEIGPRQQVLNNPCHPYTQKLIAAVPVPDPALRNRDKPKDSAGEIRNAVRPVDFVVPERRYREISAGHLVMDA
SIO_010081: AVI_RS25575
subclass of: SO_0000673
so part of: AVI_RS25575
location: complement(234022..235884)
location: region:234022-235884:-1
so has part: feature:234022-235884:-1:exon

WP_012649081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234022-235884:-1:exon

AVI_RS25580
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25580
old locus tag: Avi_8311
so part of: sequence
location: complement(235881..236738)
location: region:235881-236738:-1
so has part: feature:235881-236738:-1:exon
subclass of: SO_0000010

position:235881:-1
position: 235881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236738:-1
position: 236738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235881-236738:-1:exon

AVI_RS25580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25580
old locus tag: Avi_8311
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003517544.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MNAIFSTRFVKDSRTRALILPGAILMMILLVATLAPIIPLSDPTKMNVAQRFSSPTATYWLGTDEFGRDILSRLIWGARATLAVALSSSIIACVAGVSLALIGGYLGELAETVTVRLTDIILSFPTILLALLAVTILGPSLWTLIFVLSILNTPGFTRVAYGEVLALRTAEFVEAAQVLGLRTPRILLGTILPNILAPILVQFSLTVASAIVVESGLSFLGLGVVPPTPSWGTMIRGARAALDFNVLVLVWPCLALIISIFTLNWLCDGLRDALDIRSRKTGDAE
SIO_010081: AVI_RS25580
subclass of: SO_0000673
so part of: AVI_RS25580
location: complement(235881..236738)
location: region:235881-236738:-1
so has part: feature:235881-236738:-1:exon

WP_012649082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235881-236738:-1:exon

AVI_RS25585
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25585
old locus tag: Avi_8312
so part of: sequence
location: complement(236735..237688)
location: region:236735-237688:-1
so has part: feature:236735-237688:-1:exon
subclass of: SO_0000010

position:236735:-1
position: 236735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237688:-1
position: 237688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236735-237688:-1:exon

AVI_RS25585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25585
old locus tag: Avi_8312
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008886220.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MFAYVARRLGTALIIVFCVATVVFSALHLVPGDPVELLLSGGGGVAPPPEAVAELREQLHLDRPVFEQYLGFLERSARFDLGRSFLDNSEVASQVASRLPRTLELVLVALVLALLIGLPSGTWAAYNHNGTIDRTGLAISSFFLSVPVFVIGVALIYAFSRKLGWFPSGGFVPITDNVLQHFQNLFLPALSIALGLSAIFFRMIRTTVLETMRRDWVRTAQAKGVRPSRIVRMHVVRNALGPVVTLVGLNAGHMLGGTVLVEYIFNYPGLSSLLVQAVEQRDYPIVQGVVLTISVCFVLINLAVDIIYGSLNPRIRG
SIO_010081: AVI_RS25585
subclass of: SO_0000673
so part of: AVI_RS25585
location: complement(236735..237688)
location: region:236735-237688:-1
so has part: feature:236735-237688:-1:exon

WP_012649083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236735-237688:-1:exon

AVI_RS25590
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25590
old locus tag: Avi_8313
so part of: sequence
location: complement(237843..239384)
location: region:237843-239384:-1
so has part: feature:237843-239384:-1:exon
subclass of: SO_0000010

position:237843:-1
position: 237843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239384:-1
position: 239384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237843-239384:-1:exon

AVI_RS25590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25590
old locus tag: Avi_8313
inference: COORDINATES: protein motif:HMM:NF012706.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MDNVSRITSLSRRGFVLGSLATGAMIATAPHAMAQSAGQLRFGLSSYPTNLAPFQHGGTAAGAVKLAIHRGLFGYAPDGKVRPELVEKWSREGDRQWTFTLRKNAVFHNGDPVDTAAVKYMFDQITAEKSTAYLKAAYQEIEKIDLVDALTFRLTLKEPNETLLYNLASFNSPVISPKSTQDQIIGCGPYRITEQERGSWIRVEASKAFYRPGLPKVAKIEFKAFADEDSRVVALESGDVDIVEFVPWQSMARIEGESNLRLDAVDGPCLGITFNMKQGPFVDKRIRQAVAYAVDRSAVLQASFFGRGSILEGLPIPKDSFAFDPALQGHWKRDVEKARKLMQEAGASGGIAATMLSTSQYGMHRSAAEICQQNLADIGIAVELQLPDYPTRMQLGNRGQYQFSITGYPAPYADPDALSVILSGSPTGSYLRSYGYENKEVDDLLKRGRAVADLNERKKIYSQIAVKALDDAAFVGLTWRSEGYAMKKSVQGFHNLTGPATIFSPTTLEETTL
SIO_010081: AVI_RS25590
subclass of: SO_0000673
so part of: AVI_RS25590
location: complement(237843..239384)
location: region:237843-239384:-1
so has part: feature:237843-239384:-1:exon

WP_041699626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237843-239384:-1:exon

AVI_RS25600
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25600
old locus tag: Avi_8314
so part of: sequence
location: 239982..240278
location: region:239982-240278:1
so has part: feature:239982-240278:1:exon
subclass of: SO_0000010

position:239982:1
position: 239982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240278:1
position: 240278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239982-240278:1:exon

AVI_RS25600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25600
old locus tag: Avi_8314
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011581173.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (2Fe-2S)-binding protein
translation: MFKHIAGLSAAELTFSFEGHVLRARKGDTVASALLLASEQVTRNTSVSGSPRGPYCLMGVCFECLVEINGVPNRQACMTLLEEGMAVRKQRGAAELQG
SIO_010081: AVI_RS25600
subclass of: SO_0000673
so part of: AVI_RS25600
location: 239982..240278
location: region:239982-240278:1
so has part: feature:239982-240278:1:exon

WP_012649085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239982-240278:1:exon

AVI_RS25605
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25605
old locus tag: Avi_8316
so part of: sequence
location: 240275..241684
location: region:240275-241684:1
so has part: feature:240275-241684:1:exon
subclass of: SO_0000010

position:240275:1
position: 240275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241684:1
position: 241684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240275-241684:1:exon

AVI_RS25605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25605
old locus tag: Avi_8316
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009450123.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MIQSYDLAIIGAGPAGMAAAIEADAAGLTVALIDEQPAPGGQIYRSVEAADHQRLAVLGKDYAAGLDLVAAFRASGITYIPSGTVWNIEDSYTIDYARAGTSDRISAKSVLVASGAVERAMPLPGWTLPGVTTAGALQILLKAHGAINDDVVLAGSGPLIYLIAFQMIKAGAPPRAIVDMGQSMPVRAVLNHLPGALKGWRYLAKGLRLLRDIKKADIPFYHKASNVRIEGEGSVQGISFDHRGRPIHLATSSVALHQGVVPNQQITRLLRCKHEWNGDQRCFVPVLDHFGESSVPGVFVAGDGAGIAGAVSAALRGRIAALKVAERSGRGNGERLTQLIAELGKDSAVRPLLESLYAPSEEVLFPDDKTIVCRCEEVTAGDIRRNIALGVQGPNQLKSFLRCGMGPCQGRVCGLPVTEIIARERGETPQTIDYYRIRPPLKPLVLSELAAVHGEGAMSNTKKETEVHD
SIO_010081: AVI_RS25605
subclass of: SO_0000673
so part of: AVI_RS25605
location: 240275..241684
location: region:240275-241684:1
so has part: feature:240275-241684:1:exon

WP_012649086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240275-241684:1:exon

AVI_RS25610
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25610
old locus tag: Avi_8317
so part of: sequence
location: 241677..242030
location: region:241677-242030:1
so has part: feature:241677-242030:1:exon
subclass of: SO_0000010

position:241677:1
position: 241677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242030:1
position: 242030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241677-242030:1:exon

AVI_RS25610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25610
old locus tag: Avi_8317
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011581171.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RidA family protein
translation: MIKRYEPHTINHRVVEHNGVLYFGGLVADDKSKDMKGQTEEICAKIDALLAKVGSSKDKLLTAMLYITDFSQKDGMNEAWLEWLPAEILPTRATIGVAELGKGILIEVVVSAAACSR
SIO_010081: AVI_RS25610
subclass of: SO_0000673
so part of: AVI_RS25610
location: 241677..242030
location: region:241677-242030:1
so has part: feature:241677-242030:1:exon

WP_012649087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241677-242030:1:exon

AVI_RS25615
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25615
old locus tag: Avi_8319
so part of: sequence
location: complement(242167..243891)
location: region:242167-243891:-1
so has part: feature:242167-243891:-1:exon
subclass of: SO_0000010

position:242167:-1
position: 242167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243891:-1
position: 243891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242167-243891:-1:exon

AVI_RS25615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25615
old locus tag: Avi_8319
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011951324.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydantoinase B/oxoprolinase family protein
translation: MSNTETLIDAERIADPIAMEVFTNRLLAIADEIANAMIRASFSSNIKERKDCSVALFSSDGRLIAQASHIPLHLGSLMGSVHAVLKRYSLQKITAGDVFLCNDPYVAGGTHTPDISVITPVFHEGKIRYFTANIGHHSDVGGTVPGSIHGGAISIFEEGLRLPVMKLYRAGVLDEDLLSMISLNSRSPEERWLDIKVQAAANERGARLMLELTDALGAEQVTRSIEDVFAYTSARLRNRIAEMQDGTASFTSSIESDGLGDTPVKIQANVTVLGSKLSVDFNGSGPQARGAMNVAESALHASVYYVVKTLLDPGLLPNNGMFTNIEITAPAGSIVNPSAPAAVGARSITCNKVVRALIGAFAQLLPPERAMAAGQDIVPVMVFAGKRRGRKDGYVYLESIGGGSGARHDVDGMDGVHVHVTNTSNLPIEPLETEYDLIVKEYALVNGSAGAGEHRGGMGIAREITAPNGNVIFTARSDGHREGAPGAGGGGSGRPARLVMTAANGDEKLLNPMIANLPLQPGDSVRLETPGGGGFGAPGLRKNSDLRRDLRDGRLSAAESEAQYGASKTAEARH
SIO_010081: AVI_RS25615
subclass of: SO_0000673
so part of: AVI_RS25615
location: complement(242167..243891)
location: region:242167-243891:-1
so has part: feature:242167-243891:-1:exon

WP_012649088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242167-243891:-1:exon

AVI_RS25620
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25620
old locus tag: Avi_8320
so part of: sequence
location: complement(243894..245924)
location: region:243894-245924:-1
so has part: feature:243894-245924:-1:exon
subclass of: SO_0000010

position:243894:-1
position: 243894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245924:-1
position: 245924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243894-245924:-1:exon

AVI_RS25620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25620
old locus tag: Avi_8320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008887748.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydantoinase/oxoprolinase family protein
translation: MYRIGFDVGGTFTDFTAINVKTGEASHYKTSSTPHDPSEAIETGLAYFINERGFRPEDIEFVGHGTTVATNMVIERRGVPTGLITTRGCRDVLEIGRQTRPNLYDYSVVKPEPLVERWMCIEVAERLNANGDMLVALDEEAVRNAAEQMRQAGMKAVAIGFLHSYINDAHERRAAEIVRDVLPDAYISISSDILPEFREFERFSTTVINAYVGPRMDRYLQRFVERLKTLEIASPPRTIHSNGGLMSVDTVRAYPVRTCLSGPAAGVVGAAKVAQRSGFSNIITYDVGGTSTDVSLVLDGTPAFTTSRLVADYPVRVPMLDIHVIGAGGGSIAAIDDAGALKVGPRSAGAHPGPIAYGRGGTEPTITDANLVLGRLSSDTLLSGRMKVDTEAARRAINEQIASPLGLSVEEAALGIIRIAVASMGRAIRAVSTEKGHKLSEFALFAYGGAGPLHAGAVAREVGLSAVLVPTQPGTMCARGILLSDIGFDFVRSGVFEATEESWPSVHAQFERMQVEGQAWLDGENVAADKRSMSYVIDARYDGQNHEVQVFMLDGINTSYQTFVESFQAAHRHEYGYDIDGRAIDVVNLRLSVSGAVAAKADSEHQPDGGEGKVGSRQVYFDKGWFETAIYNRSALPIGEPVEGPAIIQEMSSTTIVEPGQSVRVDATGTMIIEVL
SIO_010081: AVI_RS25620
subclass of: SO_0000673
so part of: AVI_RS25620
location: complement(243894..245924)
location: region:243894-245924:-1
so has part: feature:243894-245924:-1:exon

WP_012649089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243894-245924:-1:exon

AVI_RS25625
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25625
old locus tag: Avi_8321
so part of: sequence
location: complement(246018..247133)
location: region:246018-247133:-1
so has part: feature:246018-247133:-1:exon
subclass of: SO_0000010

position:246018:-1
position: 246018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247133:-1
position: 247133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246018-247133:-1:exon

AVI_RS25625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25625
old locus tag: Avi_8321
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008887664.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MVVGGGLIGTAVGLGLATLGADVALLEGEDTNFHAARGNFGLVWSQSKGARGRDYASWTWSAVKAWPEFEADIRRLSGIDTHYRSGLGLSLCLSEQEFEKRAKLINRVASYGLPGSDGRMIGRNEVLEILPGIGPDVVGGSLSTLDGDCHSLALYRGLYGSFIAAGGKLRSGRAVDKIVSRGSHYEVFAGDVVVRGRKVVIAAGLGTNALAVPLGFRSFVRPEKGEILVTERIKPFLPIVLASLRQTPEGTVLMGDTKEDAGLDDRSTQRGMSHLASRAVRMFPLIGQSRVMRSWAALRVMTSDGDPVYDESPTHPGVFVASTHSGVTLAPMHCGSLARWIAGDQKPPEFQSFKASRFLGAEVAEAAHADH
SIO_010081: AVI_RS25625
subclass of: SO_0000673
so part of: AVI_RS25625
location: complement(246018..247133)
location: region:246018-247133:-1
so has part: feature:246018-247133:-1:exon

WP_197434964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246018-247133:-1:exon

AVI_RS25630
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25630
old locus tag: Avi_8322
so part of: sequence
location: 247266..248156
location: region:247266-248156:1
so has part: feature:247266-248156:1:exon
subclass of: SO_0000010

position:247266:1
position: 247266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248156:1
position: 248156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247266-248156:1:exon

AVI_RS25630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25630
old locus tag: Avi_8322
inference: COORDINATES: protein motif:HMM:NF015431.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MISQRALEAFRAVMTTGTVSAAAEELNVSQPAVSRLVRDLEEYTQLRLFSRHGGRIVATREAHEFNAEIERSFLGLRVIEQAAREIRQGRRGTVSVAVMPALAQTILPDVMADVRVSHPDFRLELLAMPTQSIVRQVATRQCPLGLTSPTHHANEVDVVKSGSLPYRCVMPDGHPLAAYEIIRLQDLSGMEFINYTDATATGRMLDHRFAHMTTPPVVNARAPISPVIAALVRKGLGVAILDPFTAQDHVNRGGVSRPVQIDEEFHWSFIKPYGEKLSSDLMAVISIFEDLSKNYA
SIO_010081: AVI_RS25630
subclass of: SO_0000673
so part of: AVI_RS25630
location: 247266..248156
location: region:247266-248156:1
so has part: feature:247266-248156:1:exon

WP_012649091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247266-248156:1:exon

AVI_RS25635
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: trbI
locus tag: AVI_RS25635
old locus tag: Avi_8323
so part of: sequence
location: complement(248211..249524)
location: region:248211-249524:-1
so has part: feature:248211-249524:-1:exon
subclass of: SO_0000010

position:248211:-1
position: 248211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249524:-1
position: 249524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248211-249524:-1:exon

AVI_RS25635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: trbI
locus tag: AVI_RS25635
old locus tag: Avi_8323
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003510256.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IncP-type conjugal transfer protein TrbI
translation: MVQSLKLGGAQNSQAASGIRRINRLPIVVVIVLAVAFLGIIFYGLASRGLYFGRDKGPETSSGDPASTFADQIKRGVTDGIIGEPQQQTTFQPTPVETKQVEEKAANPFTQQPAQRQEQRRGQELEPEEVWRARLAREQQEQILREQQRQRMARMQARDTAYDAPLAIDRGKLEARSTTDDATAGRTSTATATTSANPSDLYSAALRAGLDGQNVDPNGQRPKEDFFNADLKDLGYLSNRVVPQQSAFELKRGSVIPATLTTGINSDLPGRITAQVSQNVYDSATGHRLLIPQGTKLFGRYDSKVSFGQSRVLVVWSDIIFPNGSTLQIGGMAGTDAEGYGGFRDKVNNHYLKTFGSAVLIALIGTGIDMAVPESSTLATQDTASDAARRNFAETFGRVADRTIQRNMDVQPTLEIRPGYKFNVLVDQDIIFPGSYR
SIO_010081: AVI_RS25635
subclass of: SO_0000673
so part of: AVI_RS25635
location: complement(248211..249524)
location: region:248211-249524:-1
so has part: feature:248211-249524:-1:exon

WP_012649092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248211-249524:-1:exon

AVI_RS25640
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: trbH
locus tag: AVI_RS25640
old locus tag: Avi_8324
so part of: sequence
location: complement(249537..250013)
location: region:249537-250013:-1
so has part: feature:249537-250013:-1:exon
subclass of: SO_0000010

position:249537:-1
position: 249537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250013:-1
position: 250013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249537-250013:-1:exon

AVI_RS25640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: trbH
locus tag: AVI_RS25640
old locus tag: Avi_8324
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649093.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbH
translation: MKILAFIRRPLNLIPSLAAACILAILHSGCQSIDTEGLVASNAPPELSGPAASAIAGDMVSRLAEQIGPDKATVALKVDTSPFGQAMEAALKGWGYAVVTDQKTDSGTTVVPLAYAIISFDGQVLARLSTNSVELGRAYTVTSTGATPTSALALMRRG
SIO_010081: AVI_RS25640
subclass of: SO_0000673
so part of: AVI_RS25640
location: complement(249537..250013)
location: region:249537-250013:-1
so has part: feature:249537-250013:-1:exon

WP_012649093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249537-250013:-1:exon

AVI_RS25645
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: trbG
locus tag: AVI_RS25645
old locus tag: Avi_8325
so part of: sequence
location: complement(250013..250867)
location: region:250013-250867:-1
so has part: feature:250013-250867:-1:exon
subclass of: SO_0000010

position:250867:-1
position: 250867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250013-250867:-1:exon

AVI_RS25645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: trbG
locus tag: AVI_RS25645
old locus tag: Avi_8325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003510267.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MNIRHRRQRATLAIGLLVFAIVPLTVLDPRTVLAADGVTANEAKGMGLSTQWRGSKGLVTKGADGKVIFLYGEVQPSVVCSPLQVCDIELQGGEVVRDVLVGDTVRWKVEPATSGAAGGQAIHLIVKPSEPGLVTSMVVTTSRRTYHIQLKSHPTQYMARVGFEYPEDVSTKLADVNARLEASTIPGAGVPAEQLSFSYSISGSAGWRPTRVYSDGLKTYIQFPRSISGQDAPVLFVVSGGQNRIVNYRMKSNMMVADYNIDRAVLVSGVGWKQQKVTITRGGR
SIO_010081: AVI_RS25645
subclass of: SO_0000673
so part of: AVI_RS25645
location: complement(250013..250867)
location: region:250013-250867:-1
so has part: feature:250013-250867:-1:exon

WP_012649094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250013-250867:-1:exon

AVI_RS25650
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25650
old locus tag: Avi_8326
so part of: sequence
location: complement(250884..251546)
location: region:250884-251546:-1
so has part: feature:250884-251546:-1:exon
subclass of: SO_0000010

position:250884:-1
position: 250884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251546:-1
position: 251546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250884-251546:-1:exon

AVI_RS25650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25650
old locus tag: Avi_8326
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523580.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbF
translation: MAGPTPPDNPYIAARNEWNERYGSYVKAAAAWRIVGITGMTMAVIGFGYALYQSTQVKLIPYIVEVDKLGTAVNAGFPQQIEYADPRVVRATLGSFVSNFRSVTPDAVVQKQYIDRTYGLLRTSDPATEKVNAWFRSNSPFEKAKTATVAIEVNNIVALSNQSYQVDWTEFERDRRGKETATRRFRGIATVTLTPPQDEGVIRLNPIGLYLRDFDWTAQL
SIO_010081: AVI_RS25650
subclass of: SO_0000673
so part of: AVI_RS25650
location: complement(250884..251546)
location: region:250884-251546:-1
so has part: feature:250884-251546:-1:exon

WP_012649095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250884-251546:-1:exon

AVI_RS25655
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: trbL
locus tag: AVI_RS25655
old locus tag: Avi_8328
so part of: sequence
location: complement(251561..252745)
location: region:251561-252745:-1
so has part: feature:251561-252745:-1:exon
subclass of: SO_0000010

position:251561:-1
position: 251561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252745:-1
position: 252745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251561-252745:-1:exon

AVI_RS25655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: trbL
locus tag: AVI_RS25655
old locus tag: Avi_8328
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006312337.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MVVHPSSKLELAFVAIGLVLLASSPALAQQGQVLTTLENSVVTAAKGWETTVMNAARSLFWILAGIEVGIAAVWLAINAASLDSWFAELVKRIMFIGLFAFILDRGPEFAKAVVDSLYQIGAGGGSASPANIFDAGIRVATKMSEQAKFGLWEDNALAIAAVFAMVVVVVSFSLVAAIFVAVMVEMYVGLLAGMIMLGLGGSSHTKDFAVKYLVYAFSVGMKLMALVMIAKIGSDILLGLAEAPTATSEQFITTLAIAGISVVVFVIAMYVPPILQGVVQGASVGGGMEAIRHGGQAASAALGAGFLTIGAANRGFEAAGAARAGGASLAGAAMRGLEAGVGGAAGAVGSAAKDKAIGSPGAYAGSMLGLANAKLDQQSGRAGTKPPPPINDKK
SIO_010081: AVI_RS25655
subclass of: SO_0000673
so part of: AVI_RS25655
location: complement(251561..252745)
location: region:251561-252745:-1
so has part: feature:251561-252745:-1:exon

WP_041699534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251561-252745:-1:exon

AVI_RS25660
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: trbK
locus tag: AVI_RS25660
old locus tag: Avi_8329
so part of: sequence
location: complement(252739..252966)
location: region:252739-252966:-1
so has part: feature:252739-252966:-1:exon
subclass of: SO_0000010

position:252739:-1
position: 252739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252966:-1
position: 252966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252739-252966:-1:exon

AVI_RS25660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: trbK
locus tag: AVI_RS25660
old locus tag: Avi_8329
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649097.1
GO process: GO:0009292 - horizontal gene transfer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: entry exclusion protein TrbK
translation: MSSRLIVILALLAVVAAASAGIGTWITVQPEPASGSGAAATDTPSSEEQRRRRDQFFGGDSNRDIRGGQEMKPRW
SIO_010081: AVI_RS25660
subclass of: SO_0000673
so part of: AVI_RS25660
location: complement(252739..252966)
location: region:252739-252966:-1
so has part: feature:252739-252966:-1:exon

WP_012649097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252739-252966:-1:exon

AVI_RS25665
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: trbJ
locus tag: AVI_RS25665
old locus tag: Avi_8330
so part of: sequence
location: complement(252963..253772)
location: region:252963-253772:-1
so has part: feature:252963-253772:-1:exon
subclass of: SO_0000010

position:252963:-1
position: 252963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253772:-1
position: 253772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252963-253772:-1:exon

AVI_RS25665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: trbJ
locus tag: AVI_RS25665
old locus tag: Avi_8330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523577.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MPKRSFKLNKVVCVAIGAAGILPIVLPASALAGGVTGQATEWTQLANNTELISLVGKSAEQVNNQITQINQLAEQIQNQLNIYRNMLQNTAQLPDHIWGQVENDLKNLQNVVNEGQGIAFSMGNVEDVMKQRFQSFAETKSNLPDGASFSTTYQNWSDTNRDTIAGTLKAANLTSEQFSSEESTMSSLRSISESSDGQMKALQVGHQIAAQQVAQMQKLRGLVSQQMTMMGTWYQSEQAQKDLAQARREQFFSGTEHDIRGGQTMEPRW
SIO_010081: AVI_RS25665
subclass of: SO_0000673
so part of: AVI_RS25665
location: complement(252963..253772)
location: region:252963-253772:-1
so has part: feature:252963-253772:-1:exon

WP_012649098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252963-253772:-1:exon

AVI_RS25670
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25670
old locus tag: Avi_8331
so part of: sequence
location: complement(253744..256206)
location: region:253744-256206:-1
so has part: feature:253744-256206:-1:exon
subclass of: SO_0000010

position:253744:-1
position: 253744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256206:-1
position: 256206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253744-256206:-1:exon

AVI_RS25670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25670
old locus tag: Avi_8331
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649099.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbE
translation: MVALKSFRHSGPSFADLVPYAGLVDNGVILLKDGSLMAGWYFAGPDSESSTDAERNDVSRQINAILSRLGSGWMIQVEAVRVPTADYPQQPDCHFPDLVTRAIDAERRAHFQKERGHFESRHALILTWRPPEPRRSGLTRYIYSDTASRSATHADKALDSFLSSIREVEQYLANVVSIRRMMTRETSERGGFRVARYDELFQFIRFCVAGENHPVRLPDIPMYLDWLVTAELQHGLTPLIENRFLGVVAIDGLAAESWPGILSALDLMPLTYRWSSRLIFLDAEEARAKLERTRKKWQQKVRPFFDQLFQTQSRSLDQDAMMMVAETEDAIAEASSQLVAYGYYTPVIVLFEEDQTQLQEKCEAIRRLIQAEGFGARIETLNATDAFLGSLPGVSYANIREPLINTRNLADLIPLNSVWSGSAVAPCPFYPPASPPLMQVASGSTPFRLNLHVDDVGHTLIFGPTGSGKSTLLSLIAAQFRRYAGAQIFAFDKGGSMLPLTLGLDGDHYQIGGDATGGGEGKALSFCPLADLTTDGDHAFAAEWIEMLVALQGVTITPDYRNAISRQVGLMAESRGRSLSDFVSGVQMREIKDALHHYTVDGPMGQLLDAEEDGLALGSFQCFEIEELMNMGERNLVPVLTYLFRRIEKRLTGAPSLIILDEAWLMLGHPVFRDKIREWLKVLRKANCAVVLATQSISDAERSGIIDVLKESCPTKICLPNGAAREPGTREFYERIGFNERQIEIVATAIPKRDYYVVSPEGRRLFDMALGPIALSFVGASGKEDLKSIRALHSEHGASWPLQWLQQRGIAHAETLFQTE
SIO_010081: AVI_RS25670
subclass of: SO_0000673
so part of: AVI_RS25670
location: complement(253744..256206)
location: region:253744-256206:-1
so has part: feature:253744-256206:-1:exon

WP_012649099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253744-256206:-1:exon

AVI_RS25675
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25675
old locus tag: Avi_8332
so part of: sequence
location: complement(256217..256516)
location: region:256217-256516:-1
so has part: feature:256217-256516:-1:exon
subclass of: SO_0000010

position:256217:-1
position: 256217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256516:-1
position: 256516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256217-256516:-1:exon

AVI_RS25675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25675
old locus tag: Avi_8332
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010892446.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbD
translation: MADAGSNLIRSRVHRALSRPNLLMGADRELVLLTALVAVILIFVVLTWYAALFGIAIWLVAVGALRMMAKADPLMRRVYIRHISYKTFYRATSSPWRKF
SIO_010081: AVI_RS25675
subclass of: SO_0000673
so part of: AVI_RS25675
location: complement(256217..256516)
location: region:256217-256516:-1
so has part: feature:256217-256516:-1:exon

WP_012649100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256217-256516:-1:exon

AVI_RS25680
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: trbC
locus tag: AVI_RS25680
old locus tag: Avi_8333
so part of: sequence
location: complement(256509..256913)
location: region:256509-256913:-1
so has part: feature:256509-256913:-1:exon
subclass of: SO_0000010

position:256509:-1
position: 256509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256913:-1
position: 256913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256509-256913:-1:exon

AVI_RS25680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: trbC
locus tag: AVI_RS25680
old locus tag: Avi_8333
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523573.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer pilin TrbC
translation: MSRKTHLILTVTALALVSLGSLDGALASSGGGSLPWESPLQQIQQSITGPVAGFIALAAVAIAGAMLIFGGELNDFARRLCYVALVGGVLLGATQIVALFGATGASIGELHSQAGPFDYSPSATLIERGEGNRG
SIO_010081: AVI_RS25680
subclass of: SO_0000673
so part of: AVI_RS25680
location: complement(256509..256913)
location: region:256509-256913:-1
so has part: feature:256509-256913:-1:exon

WP_012649101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256509-256913:-1:exon

AVI_RS25685
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
gene: trbB
locus tag: AVI_RS25685
old locus tag: Avi_8334
so part of: sequence
location: complement(256903..257874)
location: region:256903-257874:-1
so has part: feature:256903-257874:-1:exon
subclass of: SO_0000010

position:256903:-1
position: 256903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257874:-1
position: 257874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256903-257874:-1:exon

AVI_RS25685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
gene: trbB
locus tag: AVI_RS25685
old locus tag: Avi_8334
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649102.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MTQLRSHPRLVRKLQDALGDQLCVALDDATVVEIMLNPDGRLFIERLGHGVARAGAMTPSAAEVVIGSVAHALQSEADDERPIISGELPIGGHRFEGLLPPIVSGPAFTIRRRASRLIPLDDYVKSKVMTEAQASAIRSAIDSRMNIVISGGTGSGKTTLANAIIAEIVAAAPDDRMVILEDTAEIQCAAENAVSLHTSDTVDMARLLKSTMRLRPDRIIVGEVRDGAALTLLKAWNTGHPGGVTTIHSNTAMSALRRLEQLTAEASQQPMQEVIGEAVDLVVSIERSGKGRRVREVIHIEGYRNSHYQTEHYAQIDEDSHVA
SIO_010081: AVI_RS25685
subclass of: SO_0000673
so part of: AVI_RS25685
location: complement(256903..257874)
location: region:256903-257874:-1
so has part: feature:256903-257874:-1:exon

WP_012649102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256903-257874:-1:exon

AVI_RS25690
type: Gene
subclass of: SO_0000704
RO_0002162: 311402
locus tag: AVI_RS25690
old locus tag: Avi_8335
so part of: sequence
location: complement(257871..258509)
location: region:257871-258509:-1
so has part: feature:257871-258509:-1:exon
subclass of: SO_0000010

position:257871:-1
position: 257871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258509:-1
position: 258509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257871-258509:-1:exon

AVI_RS25690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 311402
locus tag: AVI_RS25690
old locus tag: Avi_8335
EC number: 2.3.1.184
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649103.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-homoserine-lactone synthase
translation: MLILTVSPGQYEHQTTYLKQMHRLRAEVFGNRLEWDVAIEDGGERDQYDALSPTYILATLSGQRVVGCARLLPASGPTMLERTFPQLLAAGSLSATTAMVESSRFCVETTLPTRRAGGQLHLATLTMFAGIIEWSMANGYDEIVTATDLRFERILKRAGWPMTRLGEPVVIGNTVAVAGHLPADRMSFERVCPPEYRSIIADDNGRPFRSAA
SIO_010081: AVI_RS25690
subclass of: SO_0000673
so part of: AVI_RS25690
location: complement(257871..258509)
location: region:257871-258509:-1
so has part: feature:257871-258509:-1:exon

WP_012649103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257871-258509:-1:exon