Trachemys scripta elegans isolate TJP31775 chromosome 21, CAS_Tse_1.0, whole genome shotgun sequence.
type: Entry
definition: Trachemys scripta elegans isolate TJP31775 chromosome 21, CAS_Tse_1.0, whole genome shotgun sequence.
sequence version: NC_048318.1
sequence date: 2020-05-31
sequence: sequence
division: CON
label: NC_048318.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA634151
dblink: SAMN12189062
keyword: WGS
keyword: RefSeq
source: Trachemys scripta elegans
organism: Trachemys scripta elegans
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys.
reference: 1
references: 32227195
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM023076.1.\nAssembly name: CAS_Tse_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the California Academy of\nSciences on 2020/05/15. The original whole-genome shotgun project\nhas the accession VIRI00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: California Academy of Sciences\nAssembly Date :: 15-JUN-2019\nAssembly Method :: Supernova v. 1.2\nAssembly Name :: CAS_Tse_1.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina NovaSeq; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Trachemys scripta elegans Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 19049219
topology: linear
so has quality: SO_0000987
location: 1..19049219
location: region:1-19049219:1
RO_0002162: 31138

NC_048318
type: RefSeq
SIO_000068: refseq

PRJNA634151
type: BioProject
SIO_000068: bioproject

SAMN12189062
type: BioSample
SIO_000068: biosample

1
title: An Annotated Chromosome-Level Reference Genome of the Red-Eared Slider Turtle (Trachemys scripta elegans)
author: Brian Simison, W.
author: Parham, J.F.
author: Papenfuss, T.J.
author: Lam, A.W.
author: Henderson, J.B.
journal: Genome Biol Evol
volume: 12
issue: 4
pages: 456-462
year: 2020
pubmed: 32227195

32227195
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

position:19049219:1
position: 19049219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19049219:1:source
so part of: sequence
organism: Trachemys scripta elegans
mol type: genomic DNA
isolate: TJP31775
isolation source: river
sub species: elegans
chromosome: 21
country: USA
collection date: 14-Feb-2018

31138
type: Taxonomy
SIO_000068: taxonomy

LOC117868730
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868730
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: <1..3206
location: region:1-3206:1
so has part: feature:1-3206:1:exon
subclass of: SO_0000573

117868730
type: Gene
SIO_000068: ncbigene

position:3206:1
position: 3206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-3206:1:exon

LOC117868730
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 31138
gene: LOC117868730
product: 28S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF02543
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004643706.1
SIO_010081: LOC117868730
subclass of: SO_0000673
so part of: LOC117868730
location: <1..3206
location: region:1-3206:1
so has part: feature:1-3206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-3206:1:exon

LOC117868550
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15305..71776)
location: region:15305-71776:-1
so has part: feature:15305-71776:-1:exon
subclass of: SO_0000010

117868550
type: Gene
SIO_000068: ncbigene

position:15305:-1
position: 15305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71776:-1
position: 71776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15305-71776:-1:exon

LOC117868550
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868550
product: nectin-3-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034754605.1
SIO_010081: LOC117868550
subclass of: SO_0000673
so part of: LOC117868550
location: complement(join(15305..16284,28743..28894,40779..40896,57937..58233,66183..66521,67213..67411,71720..71776))
location: region:15305-71776:-1
so has part: feature:71720-71776:-1:exon
so has part: feature:67213-67411:-1:exon
so has part: feature:66183-66521:-1:exon
so has part: feature:57937-58233:-1:exon
so has part: feature:40779-40896:-1:exon
so has part: feature:28743-28894:-1:exon
so has part: feature:15305-16284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71720-71776:-1:exon

position:71720:-1
position: 71720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:67213-67411:-1:exon

position:67213:-1
position: 67213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67411:-1
position: 67411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66183-66521:-1:exon

position:66183:-1
position: 66183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66521:-1
position: 66521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:57937-58233:-1:exon

position:57937:-1
position: 57937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58233:-1
position: 58233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:40779-40896:-1:exon

position:40779:-1
position: 40779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40896:-1
position: 40896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:28743-28894:-1:exon

position:28743:-1
position: 28743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28894:-1
position: 28894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15305-16284:-1:exon

position:16284:-1
position: 16284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117868550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868550
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nectin-3-like
translation: MGWLEEPKWQLPISLIVLLSMHTKGALAGPVVDPHVTAVWGNNVTLKCIIEINGTITQISWEKIYGKSKQTIAVHHPEYGFSVQGEYQGRVSFKNYSLTDATITLNNISFSDSGEYVCKAVTFPLGNAQSSTTVTVLVEPIVSLTKGPNSLIDGENQTIAAICTAATGKPAADIDWEGGLGEMESSSTLFPNETVTVVSQYKLIPTKFARGRRITCVVRHPALEKELRYPYTLDVLYAPEVSVTGYDGNWFIGREHVQLRCNADANPLPMEFTWTRLDGQWPEGLMSSNNTLHFNSPLTFNYTGTYVCKVTNSLGQRSDQKTIYILDPTTTTTRPPTVPWHPSTDGIRGLATEPKLMHFPTSTLSSSIAGNWDTIITSAVGGTLFLILVSVLVGIIYYRRRRMVRRYYFARNYILPSDMQEESQIDVLQSDDVDSYPDSIKKEXKHPVSSLIAKDYLEDPDNPEWNNVDSINRSQEWYERPIDYYEGGTLGMQYMGGKCYDDNEEDFVSHVDGSVISQKERHV
SIO_010081: LOC117868550
subclass of: SO_0000673
so part of: LOC117868550
location: complement(join(15692..16284,28743..28894,40779..40896,57937..58233,66183..66521,67213..67285))
location: region:15692-67285:-1
so has part: feature:67213-67285:-1:exon
so has part: feature:66183-66521:-1:exon
so has part: feature:57937-58233:-1:exon
so has part: feature:40779-40896:-1:exon
so has part: feature:28743-28894:-1:exon
so has part: feature:15692-16284:-1:exon

XP_034610496.1
type: Protein
SIO_000068: ncbiprotein

position:15692:-1
position: 15692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67285:-1
position: 67285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67213-67285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66183-66521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57937-58233:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40779-40896:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28743-28894:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15692-16284:-1:exon

LOC117868723
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868723
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 81238..81414
location: region:81238-81414:1
so has part: feature:81238-81414:1:exon
subclass of: SO_0000623

117868723
type: Gene
SIO_000068: ncbigene

position:81238:1
position: 81238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81414:1
position: 81414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81238-81414:1:exon

LOC117868723
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: snRNA
gene: LOC117868723
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004643700.1
SIO_010081: LOC117868723
subclass of: SO_0000673
so part of: LOC117868723
location: 81238..81414
location: region:81238-81414:1
so has part: feature:81238-81414:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81238-81414:1:exon

LOC117868732
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868732
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(82252..82409)
location: region:82252-82409:-1
so has part: feature:82252-82409:-1:exon
subclass of: SO_0000623

117868732
type: Gene
SIO_000068: ncbigene

position:82252:-1
position: 82252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82409:-1
position: 82409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82252-82409:-1:exon

LOC117868732
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: snRNA
gene: LOC117868732
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004643708.1
SIO_010081: LOC117868732
subclass of: SO_0000673
so part of: LOC117868732
location: complement(82252..82409)
location: region:82252-82409:-1
so has part: feature:82252-82409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82252-82409:-1:exon

LOC117868726
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868726
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 86609..86795
location: region:86609-86795:1
so has part: feature:86609-86795:1:exon
subclass of: SO_0000623

117868726
type: Gene
SIO_000068: ncbigene

position:86609:1
position: 86609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86795:1
position: 86795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86609-86795:1:exon

LOC117868726
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: snRNA
gene: LOC117868726
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004643702.1
SIO_010081: LOC117868726
subclass of: SO_0000673
so part of: LOC117868726
location: 86609..86795
location: region:86609-86795:1
so has part: feature:86609-86795:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86609-86795:1:exon

LOC117868722
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868722
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(87629..87767)
location: region:87629-87767:-1
so has part: feature:87629-87767:-1:exon

117868722
type: Gene
SIO_000068: ncbigene

position:87629:-1
position: 87629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87767:-1
position: 87767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87629-87767:-1:exon

LOC117868722
type: Exon
subclass of: SO_0000147
RO_0002162: 31138
gene: LOC117868722
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117868722
subclass of: SO_0000673
so part of: LOC117868722
location: complement(87629..87767)
location: region:87629-87767:-1
so has part: feature:87629-87767:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87629-87767:-1:exon

TRNAQ-CUG
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: TRNAQ-CUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 97067..97138
location: region:97067-97138:1
so has part: feature:97067-97138:1:exon
subclass of: SO_0000663

117868733
type: Gene
SIO_000068: ncbigene

position:97067:1
position: 97067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97138:1
position: 97138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97067-97138:1:exon

TRNAQ-CUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31138
gene: TRNAQ-CUG
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamine (anticodon CUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:97100..97102,aa:Gln,seq:ctg)
SIO_010081: TRNAQ-CUG
subclass of: SO_0000673
so part of: TRNAQ-CUG
location: 97067..97138
location: region:97067-97138:1
so has part: feature:97067-97138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97067-97138:1:exon

TRNAF-GAA
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: TRNAF-GAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 110997..111069
location: region:110997-111069:1
so has part: feature:110997-111069:1:exon
subclass of: SO_0000663

117868734
type: Gene
SIO_000068: ncbigene

position:110997:1
position: 110997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111069:1
position: 111069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110997-111069:1:exon

TRNAF-GAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 31138
gene: TRNAF-GAA
product: tRNA-Phe
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA phenylalanine (anticodon GAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:111030..111032,aa:Phe,seq:gaa)
SIO_010081: TRNAF-GAA
subclass of: SO_0000673
so part of: TRNAF-GAA
location: 110997..111069
location: region:110997-111069:1
so has part: feature:110997-111069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110997-111069:1:exon

LOC117868731
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868731
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 121757..121875
location: region:121757-121875:1
so has part: feature:121757-121875:1:exon
subclass of: SO_0000573

117868731
type: Gene
SIO_000068: ncbigene

position:121757:1
position: 121757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121875:1
position: 121875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121757-121875:1:exon

LOC117868731
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 31138
gene: LOC117868731
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004643707.1
SIO_010081: LOC117868731
subclass of: SO_0000673
so part of: LOC117868731
location: 121757..121875
location: region:121757-121875:1
so has part: feature:121757-121875:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121757-121875:1:exon

LOC117868503
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868503
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(134629..252712)
location: region:134629-252712:-1
so has part: feature:134629-252712:-1:exon
subclass of: SO_0000010

117868503
type: Gene
SIO_000068: ncbigene

position:134629:-1
position: 134629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252712:-1
position: 252712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134629-252712:-1:exon

LOC117868503
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868503
product: zinc finger protein 501-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034754478.1
SIO_010081: LOC117868503
subclass of: SO_0000673
so part of: LOC117868503
location: complement(join(134629..138142,153401..153624,252662..252712))
location: region:134629-252712:-1
so has part: feature:252662-252712:-1:exon
so has part: feature:153401-153624:-1:exon
so has part: feature:134629-138142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252662-252712:-1:exon

position:252662:-1
position: 252662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153401-153624:-1:exon

position:153401:-1
position: 153401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153624:-1
position: 153624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:134629-138142:-1:exon

position:138142:-1
position: 138142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117868503
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868503
product: zinc finger protein 501-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_034754477.1
SIO_010081: LOC117868503
subclass of: SO_0000673
so part of: LOC117868503
location: complement(join(134629..138142,157258..157342))
location: region:134629-157342:-1
so has part: feature:157258-157342:-1:exon
so has part: feature:134629-138142:-1:exon

position:157342:-1
position: 157342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157258-157342:-1:exon

position:157258:-1
position: 157258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134629-138142:-1:exon

LOC117868503
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868503
product: zinc finger protein 501-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034754479.1
SIO_010081: LOC117868503
subclass of: SO_0000673
so part of: LOC117868503
location: complement(join(134629..138142,153401..153624,157258..157339))
location: region:134629-157339:-1
so has part: feature:157258-157339:-1:exon
so has part: feature:153401-153624:-1:exon
so has part: feature:134629-138142:-1:exon

position:157339:-1
position: 157339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157258-157339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:153401-153624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134629-138142:-1:exon

LOC117868503
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868503
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 501-like
translation: MRMVNETMDQNPQQEDEEVEPHGVLLQRCKESVSRSCEQEKACESQYWPEKQQGNQPMQKTGQSVNYQGNQKYNKNTMAQQVILKGERNNTCTDCGKKFSKRAHLIIHQRSHTGEKPYECCECGKTFAQSSNLTTHKRIHTGEKPYECCECGKSFTDHSTLISHQRIHTGEKPYECCECGKSFSRSLHLIQHQRIHTGEKPYECYECGQTFAQSSQLIRHQRIHTGEKPYECCECGKTFTGSSNLISHQRIHTGEKPYECYECGKTFTDSSTLISHQRIHTGQKPYGCCECGKTFSWSSALIQHQRIHTGEKPYECCECRKTFSQSSALIQHQRIHTGEKPYACCECGKTFAQSSKLIRHQRIHRRE
SIO_010081: LOC117868503
subclass of: SO_0000673
so part of: LOC117868503
location: complement(137035..138138)
location: region:137035-138138:-1
so has part: feature:137035-138138:-1:exon

XP_034610368.1
type: Protein
SIO_000068: ncbiprotein

position:137035:-1
position: 137035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138138:-1
position: 138138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137035-138138:-1:exon

LOC117868503
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868503
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 501-like
translation: MRMVNETMDQNPQQEDEEVEPHGVLLQRCKESVSRSCEQEKACESQYWPEKQQGNQPMQKTGQSVNYQGNQKYNKNTMAQQVILKGERNNTCTDCGKKFSKRAHLIIHQRSHTGEKPYECCECGKTFAQSSNLTTHKRIHTGEKPYECCECGKSFTDHSTLISHQRIHTGEKPYECCECGKSFSRSLHLIQHQRIHTGEKPYECYECGQTFAQSSQLIRHQRIHTGEKPYECCECGKTFTGSSNLISHQRIHTGEKPYECYECGKTFTDSSTLISHQRIHTGQKPYGCCECGKTFSWSSALIQHQRIHTGEKPYECCECRKTFSQSSALIQHQRIHTGEKPYACCECGKTFAQSSKLIRHQRIHRRE
SIO_010081: LOC117868503
subclass of: SO_0000673
so part of: LOC117868503
location: complement(137035..138138)
location: region:137035-138138:-1
so has part: feature:137035-138138:-1:exon

XP_034610369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137035-138138:-1:exon

LOC117868503
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868503
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 501-like
translation: MRMVNETMDQNPQQEDEEVEPHGVLLQRCKESVSRSCEQEKACESQYWPEKQQGNQPMQKTGQSVNYQGNQKYNKNTMAQQVILKGERNNTCTDCGKKFSKRAHLIIHQRSHTGEKPYECCECGKTFAQSSNLTTHKRIHTGEKPYECCECGKSFTDHSTLISHQRIHTGEKPYECCECGKSFSRSLHLIQHQRIHTGEKPYECYECGQTFAQSSQLIRHQRIHTGEKPYECCECGKTFTGSSNLISHQRIHTGEKPYECYECGKTFTDSSTLISHQRIHTGQKPYGCCECGKTFSWSSALIQHQRIHTGEKPYECCECRKTFSQSSALIQHQRIHTGEKPYACCECGKTFAQSSKLIRHQRIHRRE
SIO_010081: LOC117868503
subclass of: SO_0000673
so part of: LOC117868503
location: complement(137035..138138)
location: region:137035-138138:-1
so has part: feature:137035-138138:-1:exon

XP_034610370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137035-138138:-1:exon

LOC117868724
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868724
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 196707..196894
location: region:196707-196894:1
so has part: feature:196707-196894:1:exon
subclass of: SO_0000623

117868724
type: Gene
SIO_000068: ncbigene

position:196707:1
position: 196707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196894:1
position: 196894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196707-196894:1:exon

LOC117868724
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: snRNA
gene: LOC117868724
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004643701.1
SIO_010081: LOC117868724
subclass of: SO_0000673
so part of: LOC117868724
location: 196707..196894
location: region:196707-196894:1
so has part: feature:196707-196894:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196707-196894:1:exon

LOC117868502
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(208512..252755)
location: region:208512-252755:-1
so has part: feature:208512-252755:-1:exon
subclass of: SO_0000010

117868502
type: Gene
SIO_000068: ncbigene

position:208512:-1
position: 208512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252755:-1
position: 252755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208512-252755:-1:exon

LOC117868502
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868502
product: zinc finger protein 436-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_034754473.1
SIO_010081: LOC117868502
subclass of: SO_0000673
so part of: LOC117868502
location: complement(join(208512..210214,212684..212797,245047..245173,245887..245975,252662..252743))
location: region:208512-252743:-1
so has part: feature:252662-252743:-1:exon
so has part: feature:245887-245975:-1:exon
so has part: feature:245047-245173:-1:exon
so has part: feature:212684-212797:-1:exon
so has part: feature:208512-210214:-1:exon

position:252743:-1
position: 252743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252662-252743:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245887-245975:-1:exon

position:245887:-1
position: 245887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245975:-1
position: 245975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:245047-245173:-1:exon

position:245047:-1
position: 245047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245173:-1
position: 245173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:212684-212797:-1:exon

position:212684:-1
position: 212684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212797:-1
position: 212797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:208512-210214:-1:exon

position:210214:-1
position: 210214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117868502
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868502
product: zinc finger protein 436-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_034754474.1
SIO_010081: LOC117868502
subclass of: SO_0000673
so part of: LOC117868502
location: complement(join(208512..210211,212684..212797,245047..245173,245887..245975,252662..252742))
location: region:208512-252742:-1
so has part: feature:252662-252742:-1:exon
so has part: feature:245887-245975:-1:exon
so has part: feature:245047-245173:-1:exon
so has part: feature:212684-212797:-1:exon
so has part: feature:208512-210211:-1:exon

position:252742:-1
position: 252742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252662-252742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245887-245975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245047-245173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212684-212797:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:208512-210211:-1:exon

position:210211:-1
position: 210211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117868502
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868502
product: zinc finger protein 436-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034754475.1
SIO_010081: LOC117868502
subclass of: SO_0000673
so part of: LOC117868502
location: complement(join(208512..210214,212684..212797,245047..245173,245887..245975,247008..247140,252662..252716))
location: region:208512-252716:-1
so has part: feature:252662-252716:-1:exon
so has part: feature:247008-247140:-1:exon
so has part: feature:245887-245975:-1:exon
so has part: feature:245047-245173:-1:exon
so has part: feature:212684-212797:-1:exon
so has part: feature:208512-210214:-1:exon

position:252716:-1
position: 252716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252662-252716:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247008-247140:-1:exon

position:247008:-1
position: 247008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247140:-1
position: 247140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:245887-245975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:245047-245173:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:212684-212797:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:208512-210214:-1:exon

LOC117868502
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 436-like isoform X2
translation: MFCSSSFCPSRDQGKEMAAVEPFEEPMAFEEVAVYFSKEEWALLDLTQRALYRDVMQENYENVTSLGFPVSKPDVTSQLKQGEEPWAPDLQGSEESEILRGIFTGARLGSETMEQNPQQEDDEEVEPHGTLLQRCKGSVSGSCDQGKASESQHIPERWQGNQPTQKVGQSVYYRGTRKRLKETTAQQRIPMGERNNTCVECGKNFSRHSHLIRHQRIHTGERPYECCECGKTFARISTLNNHQRIHTGEKPYGCCKCGKTFTERSNLIQHQRIHTGEKPYECCECGKTFTLSSHLIRHQRIHKGERPHECCTCRKTFTERSNLIQHQRIHTGEKPYECCECGKTFTRCSTLIKHQRIHKGERPYECCQCGKTFTRRSHLIQHQSIHKGERPHECCTCRKTFTERSNLIQHQRIHTGEKPYECCECGKTFTRCSSLIKHQRIHKGERPYECCQCGKTFTRRSHLIRHQRIHKGERPYECCQCGKTFTRRSHLIRHQRIHTGERPYECSKCGEFFPQSSALICHQRICKGVKDHKNIV
SIO_010081: LOC117868502
subclass of: SO_0000673
so part of: LOC117868502
location: complement(join(208914..210211,212684..212797,245047..245173,245887..245958))
location: region:208914-245958:-1
so has part: feature:245887-245958:-1:exon
so has part: feature:245047-245173:-1:exon
so has part: feature:212684-212797:-1:exon
so has part: feature:208914-210211:-1:exon

XP_034610365.1
type: Protein
SIO_000068: ncbiprotein

position:208914:-1
position: 208914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245958:-1
position: 245958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245887-245958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245047-245173:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212684-212797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208914-210211:-1:exon

LOC117868502
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 436-like isoform X1
translation: MFCSSSFCPSRDQGKEMAAVEPFEEPMAFEEVAVYFSKEEWALLDLTQRALYRDVMQENYENVTSLGFPVSKPDVTSQLKQGEEPWAPDLQGSEESEILRGIFTAGARLGSETMEQNPQQEDDEEVEPHGTLLQRCKGSVSGSCDQGKASESQHIPERWQGNQPTQKVGQSVYYRGTRKRLKETTAQQRIPMGERNNTCVECGKNFSRHSHLIRHQRIHTGERPYECCECGKTFARISTLNNHQRIHTGEKPYGCCKCGKTFTERSNLIQHQRIHTGEKPYECCECGKTFTLSSHLIRHQRIHKGERPHECCTCRKTFTERSNLIQHQRIHTGEKPYECCECGKTFTRCSTLIKHQRIHKGERPYECCQCGKTFTRRSHLIQHQSIHKGERPHECCTCRKTFTERSNLIQHQRIHTGEKPYECCECGKTFTRCSSLIKHQRIHKGERPYECCQCGKTFTRRSHLIRHQRIHKGERPYECCQCGKTFTRRSHLIRHQRIHTGERPYECSKCGEFFPQSSALICHQRICKGVKDHKNIV
SIO_010081: LOC117868502
subclass of: SO_0000673
so part of: LOC117868502
location: complement(join(208914..210214,212684..212797,245047..245173,245887..245958))
location: region:208914-245958:-1
so has part: feature:245887-245958:-1:exon
so has part: feature:245047-245173:-1:exon
so has part: feature:212684-212797:-1:exon
so has part: feature:208914-210214:-1:exon

XP_034610364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245887-245958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245047-245173:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212684-212797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208914-210214:-1:exon

LOC117868502
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 436-like isoform X1
translation: MFCSSSFCPSRDQGKEMAAVEPFEEPMAFEEVAVYFSKEEWALLDLTQRALYRDVMQENYENVTSLGFPVSKPDVTSQLKQGEEPWAPDLQGSEESEILRGIFTAGARLGSETMEQNPQQEDDEEVEPHGTLLQRCKGSVSGSCDQGKASESQHIPERWQGNQPTQKVGQSVYYRGTRKRLKETTAQQRIPMGERNNTCVECGKNFSRHSHLIRHQRIHTGERPYECCECGKTFARISTLNNHQRIHTGEKPYGCCKCGKTFTERSNLIQHQRIHTGEKPYECCECGKTFTLSSHLIRHQRIHKGERPHECCTCRKTFTERSNLIQHQRIHTGEKPYECCECGKTFTRCSTLIKHQRIHKGERPYECCQCGKTFTRRSHLIQHQSIHKGERPHECCTCRKTFTERSNLIQHQRIHTGEKPYECCECGKTFTRCSSLIKHQRIHKGERPYECCQCGKTFTRRSHLIRHQRIHKGERPYECCQCGKTFTRRSHLIRHQRIHTGERPYECSKCGEFFPQSSALICHQRICKGVKDHKNIV
SIO_010081: LOC117868502
subclass of: SO_0000673
so part of: LOC117868502
location: complement(join(208914..210214,212684..212797,245047..245173,245887..245958))
location: region:208914-245958:-1
so has part: feature:245887-245958:-1:exon
so has part: feature:245047-245173:-1:exon
so has part: feature:212684-212797:-1:exon
so has part: feature:208914-210214:-1:exon

XP_034610366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245887-245958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245047-245173:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212684-212797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208914-210214:-1:exon

LOC117868502
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 31138
gene: LOC117868502
product: zinc finger protein 436-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004643652.1
SIO_010081: LOC117868502
so part of: LOC117868502
location: complement(join(224819..225141,245047..245173,245887..245975,252662..252755))
location: region:224819-252755:-1
so has part: feature:252662-252755:-1:exon
so has part: feature:245887-245975:-1:exon
so has part: feature:245047-245173:-1:exon
so has part: feature:224819-225141:-1:exon

position:224819:-1
position: 224819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252662-252755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245887-245975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245047-245173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:224819-225141:-1:exon

position:225141:-1
position: 225141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117868502
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 31138
gene: LOC117868502
product: zinc finger protein 436-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004643651.1
SIO_010081: LOC117868502
so part of: LOC117868502
location: complement(join(239085..239232,245047..245173,245887..245975,252662..252753))
location: region:239085-252753:-1
so has part: feature:252662-252753:-1:exon
so has part: feature:245887-245975:-1:exon
so has part: feature:245047-245173:-1:exon
so has part: feature:239085-239232:-1:exon

position:239085:-1
position: 239085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252753:-1
position: 252753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252662-252753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245887-245975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245047-245173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239085-239232:-1:exon

position:239232:-1
position: 239232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117868616
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868616
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 295690..301439
location: region:295690-301439:1
so has part: feature:295690-301439:1:exon
subclass of: SO_0000011

117868616
type: Gene
SIO_000068: ncbigene

position:295690:1
position: 295690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301439:1
position: 301439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295690-301439:1:exon

LOC117868616
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117868616
product: uncharacterized LOC117868616, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004643674.1
SIO_010081: LOC117868616
subclass of: SO_0000673
so part of: LOC117868616
location: join(295690..295760,296613..296734,299747..299821,300633..301439)
location: region:295690-301439:1
so has part: feature:295690-295760:1:exon
so has part: feature:296613-296734:1:exon
so has part: feature:299747-299821:1:exon
so has part: feature:300633-301439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295690-295760:1:exon

position:295760:1
position: 295760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:296613-296734:1:exon

position:296613:1
position: 296613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296734:1
position: 296734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:299747-299821:1:exon

position:299747:1
position: 299747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299821:1
position: 299821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:300633-301439:1:exon

position:300633:1
position: 300633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117868616
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117868616
product: uncharacterized LOC117868616, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004643673.1
SIO_010081: LOC117868616
subclass of: SO_0000673
so part of: LOC117868616
location: join(295690..295760,296613..296715,299747..299821,300633..301439)
location: region:295690-301439:1
so has part: feature:295690-295760:1:exon
so has part: feature:296613-296715:1:exon
so has part: feature:299747-299821:1:exon
so has part: feature:300633-301439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295690-295760:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:296613-296715:1:exon

position:296715:1
position: 296715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:299747-299821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300633-301439:1:exon

LOC117868538
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(303049..321276)
location: region:303049-321276:-1
so has part: feature:303049-321276:-1:exon
subclass of: SO_0000011

117868538
type: Gene
SIO_000068: ncbigene

position:303049:-1
position: 303049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321276:-1
position: 321276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303049-321276:-1:exon

LOC117868538
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117868538
product: uncharacterized LOC117868538
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004643659.1
SIO_010081: LOC117868538
subclass of: SO_0000673
so part of: LOC117868538
location: complement(join(303049..303752,306481..306632,320262..320397,321184..321276))
location: region:303049-321276:-1
so has part: feature:321184-321276:-1:exon
so has part: feature:320262-320397:-1:exon
so has part: feature:306481-306632:-1:exon
so has part: feature:303049-303752:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:321184-321276:-1:exon

position:321184:-1
position: 321184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320262-320397:-1:exon

position:320262:-1
position: 320262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320397:-1
position: 320397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:306481-306632:-1:exon

position:306481:-1
position: 306481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306632:-1
position: 306632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:303049-303752:-1:exon

position:303752:-1
position: 303752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FEZ1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: FEZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 321373..473596
location: region:321373-473596:1
so has part: feature:321373-473596:1:exon
subclass of: SO_0000010

117868539
type: Gene
SIO_000068: ncbigene

position:321373:1
position: 321373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473596:1
position: 473596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321373-473596:1:exon

FEZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: FEZ1
product: fasciculation and elongation protein zeta 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034754586.1
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: join(321373..321572,336338..336686,350288..350387,401489..401657,411067..411338,418970..419050,428164..428239,455867..455932,470656..473596)
location: region:321373-473596:1
so has part: feature:321373-321572:1:exon
so has part: feature:336338-336686:1:exon
so has part: feature:350288-350387:1:exon
so has part: feature:401489-401657:1:exon
so has part: feature:411067-411338:1:exon
so has part: feature:418970-419050:1:exon
so has part: feature:428164-428239:1:exon
so has part: feature:455867-455932:1:exon
so has part: feature:470656-473596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:321373-321572:1:exon

position:321572:1
position: 321572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336338-336686:1:exon

position:336338:1
position: 336338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336686:1
position: 336686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:350288-350387:1:exon

position:350288:1
position: 350288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350387:1
position: 350387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:401489-401657:1:exon

position:401489:1
position: 401489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401657:1
position: 401657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:411067-411338:1:exon

position:411067:1
position: 411067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411338:1
position: 411338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:418970-419050:1:exon

position:418970:1
position: 418970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419050:1
position: 419050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:428164-428239:1:exon

position:428164:1
position: 428164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428239:1
position: 428239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:455867-455932:1:exon

position:455867:1
position: 455867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455932:1
position: 455932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:470656-473596:1:exon

position:470656:1
position: 470656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FEZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: FEZ1
product: fasciculation and elongation protein zeta 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034754583.1
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: join(321374..321572,336338..336686,350288..350387,388438..388524,401489..401657,411067..411338,418970..419050,428164..428239,455867..455932,470656..473596)
location: region:321374-473596:1
so has part: feature:321374-321572:1:exon
so has part: feature:336338-336686:1:exon
so has part: feature:350288-350387:1:exon
so has part: feature:388438-388524:1:exon
so has part: feature:401489-401657:1:exon
so has part: feature:411067-411338:1:exon
so has part: feature:418970-419050:1:exon
so has part: feature:428164-428239:1:exon
so has part: feature:455867-455932:1:exon
so has part: feature:470656-473596:1:exon

position:321374:1
position: 321374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321374-321572:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336338-336686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:350288-350387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388438-388524:1:exon

position:388438:1
position: 388438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388524:1
position: 388524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:401489-401657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411067-411338:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418970-419050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:428164-428239:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455867-455932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:470656-473596:1:exon

FEZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: FEZ1
product: fasciculation and elongation protein zeta 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034754584.1
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: join(321605..321798,336338..336686,350288..350387,388438..388524,401489..401657,411067..411338,418970..419050,428164..428239,455867..455932,470656..473596)
location: region:321605-473596:1
so has part: feature:321605-321798:1:exon
so has part: feature:336338-336686:1:exon
so has part: feature:350288-350387:1:exon
so has part: feature:388438-388524:1:exon
so has part: feature:401489-401657:1:exon
so has part: feature:411067-411338:1:exon
so has part: feature:418970-419050:1:exon
so has part: feature:428164-428239:1:exon
so has part: feature:455867-455932:1:exon
so has part: feature:470656-473596:1:exon

position:321605:1
position: 321605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321605-321798:1:exon

position:321798:1
position: 321798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336338-336686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:350288-350387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388438-388524:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:401489-401657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411067-411338:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418970-419050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:428164-428239:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455867-455932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:470656-473596:1:exon

FEZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: FEZ1
product: fasciculation and elongation protein zeta 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034754585.1
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: join(331147..331211,336338..336686,350288..350387,388438..388524,401489..401657,411067..411338,418970..419050,428164..428239,455867..455932,470656..473596)
location: region:331147-473596:1
so has part: feature:331147-331211:1:exon
so has part: feature:336338-336686:1:exon
so has part: feature:350288-350387:1:exon
so has part: feature:388438-388524:1:exon
so has part: feature:401489-401657:1:exon
so has part: feature:411067-411338:1:exon
so has part: feature:418970-419050:1:exon
so has part: feature:428164-428239:1:exon
so has part: feature:455867-455932:1:exon
so has part: feature:470656-473596:1:exon

position:331147:1
position: 331147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331147-331211:1:exon

position:331211:1
position: 331211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336338-336686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:350288-350387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388438-388524:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:401489-401657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411067-411338:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418970-419050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:428164-428239:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455867-455932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:470656-473596:1:exon

FEZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: FEZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fasciculation and elongation protein zeta-1 isoform X1
translation: MEAPLVSLDEEFEDLRPCYVDDREEKPHCFYGSSPQHLEDPSLSELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNHLQIQEEEEHLQDEEVWDALTENYISSITEDWRDPDIEVLNGNISDSEIHEKEEEELNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEILEEDDGGETSSQADSVLLQEMQILTQTFNNNWSYEGLEQMSVSELAELLDHVEGAIRDYSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEHRELMKRRRKEKGLSLQSSRIERGTQMPLKRFSMEGISNILQTGIRQTFGNSATDKQYLNTVIPYEKKGSPPSVEDLQMLTNILFAMKEDNEKVPTLLTDYILKVLCPT
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: join(336376..336686,350288..350387,388438..388524,401489..401657,411067..411338,418970..419050,428164..428239,455867..455932,470656..470672)
location: region:336376-470672:1
so has part: feature:336376-336686:1:exon
so has part: feature:350288-350387:1:exon
so has part: feature:388438-388524:1:exon
so has part: feature:401489-401657:1:exon
so has part: feature:411067-411338:1:exon
so has part: feature:418970-419050:1:exon
so has part: feature:428164-428239:1:exon
so has part: feature:455867-455932:1:exon
so has part: feature:470656-470672:1:exon

XP_034610474.1
type: Protein
SIO_000068: ncbiprotein

position:336376:1
position: 336376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470672:1
position: 470672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336376-336686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350288-350387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388438-388524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:401489-401657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411067-411338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418970-419050:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:428164-428239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455867-455932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:470656-470672:1:exon

FEZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: FEZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fasciculation and elongation protein zeta-1 isoform X1
translation: MEAPLVSLDEEFEDLRPCYVDDREEKPHCFYGSSPQHLEDPSLSELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNHLQIQEEEEHLQDEEVWDALTENYISSITEDWRDPDIEVLNGNISDSEIHEKEEEELNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEILEEDDGGETSSQADSVLLQEMQILTQTFNNNWSYEGLEQMSVSELAELLDHVEGAIRDYSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEHRELMKRRRKEKGLSLQSSRIERGTQMPLKRFSMEGISNILQTGIRQTFGNSATDKQYLNTVIPYEKKGSPPSVEDLQMLTNILFAMKEDNEKVPTLLTDYILKVLCPT
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: join(336376..336686,350288..350387,388438..388524,401489..401657,411067..411338,418970..419050,428164..428239,455867..455932,470656..470672)
location: region:336376-470672:1
so has part: feature:336376-336686:1:exon
so has part: feature:350288-350387:1:exon
so has part: feature:388438-388524:1:exon
so has part: feature:401489-401657:1:exon
so has part: feature:411067-411338:1:exon
so has part: feature:418970-419050:1:exon
so has part: feature:428164-428239:1:exon
so has part: feature:455867-455932:1:exon
so has part: feature:470656-470672:1:exon

XP_034610475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336376-336686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350288-350387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388438-388524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:401489-401657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411067-411338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418970-419050:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:428164-428239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455867-455932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:470656-470672:1:exon

FEZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: FEZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fasciculation and elongation protein zeta-1 isoform X1
translation: MEAPLVSLDEEFEDLRPCYVDDREEKPHCFYGSSPQHLEDPSLSELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNHLQIQEEEEHLQDEEVWDALTENYISSITEDWRDPDIEVLNGNISDSEIHEKEEEELNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEILEEDDGGETSSQADSVLLQEMQILTQTFNNNWSYEGLEQMSVSELAELLDHVEGAIRDYSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEHRELMKRRRKEKGLSLQSSRIERGTQMPLKRFSMEGISNILQTGIRQTFGNSATDKQYLNTVIPYEKKGSPPSVEDLQMLTNILFAMKEDNEKVPTLLTDYILKVLCPT
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: join(336376..336686,350288..350387,388438..388524,401489..401657,411067..411338,418970..419050,428164..428239,455867..455932,470656..470672)
location: region:336376-470672:1
so has part: feature:336376-336686:1:exon
so has part: feature:350288-350387:1:exon
so has part: feature:388438-388524:1:exon
so has part: feature:401489-401657:1:exon
so has part: feature:411067-411338:1:exon
so has part: feature:418970-419050:1:exon
so has part: feature:428164-428239:1:exon
so has part: feature:455867-455932:1:exon
so has part: feature:470656-470672:1:exon

XP_034610476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336376-336686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350288-350387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388438-388524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:401489-401657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411067-411338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418970-419050:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:428164-428239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455867-455932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:470656-470672:1:exon

FEZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: FEZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fasciculation and elongation protein zeta-1 isoform X2
translation: MEAPLVSLDEEFEDLRPCYVDDREEKPHCFYGSSPQHLEDPSLSELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNHLQIQEEEEHLQDEEVWDALTENYISSITEDWRDPDIEVLNGNISDSEVIEEIEEMMQNSPDPEEEEEILEEDDGGETSSQADSVLLQEMQILTQTFNNNWSYEGLEQMSVSELAELLDHVEGAIRDYSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEHRELMKRRRKEKGLSLQSSRIERGTQMPLKRFSMEGISNILQTGIRQTFGNSATDKQYLNTVIPYEKKGSPPSVEDLQMLTNILFAMKEDNEKVPTLLTDYILKVLCPT
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: join(336376..336686,350288..350387,401489..401657,411067..411338,418970..419050,428164..428239,455867..455932,470656..470672)
location: region:336376-470672:1
so has part: feature:336376-336686:1:exon
so has part: feature:350288-350387:1:exon
so has part: feature:401489-401657:1:exon
so has part: feature:411067-411338:1:exon
so has part: feature:418970-419050:1:exon
so has part: feature:428164-428239:1:exon
so has part: feature:455867-455932:1:exon
so has part: feature:470656-470672:1:exon

XP_034610477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336376-336686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350288-350387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:401489-401657:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411067-411338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418970-419050:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:428164-428239:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455867-455932:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:470656-470672:1:exon

PKNOX2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(504768..1150420)
location: region:504768-1150420:-1
so has part: feature:504768-1150420:-1:exon
subclass of: SO_0000010

117868599
type: Gene
SIO_000068: ncbigene

position:504768:-1
position: 504768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150420:-1
position: 1150420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504768-1150420:-1:exon

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034754698.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(504768..507915,517405..517583,522530..522606,555245..555364,573094..573191,574100..574229,656147..656335,685725..685896,740998..741137,846837..846941,1064896..1064968,1150341..1150420))
location: region:504768-1150420:-1
so has part: feature:1150341-1150420:-1:exon
so has part: feature:1064896-1064968:-1:exon
so has part: feature:846837-846941:-1:exon
so has part: feature:740998-741137:-1:exon
so has part: feature:685725-685896:-1:exon
so has part: feature:656147-656335:-1:exon
so has part: feature:574100-574229:-1:exon
so has part: feature:573094-573191:-1:exon
so has part: feature:555245-555364:-1:exon
so has part: feature:522530-522606:-1:exon
so has part: feature:517405-517583:-1:exon
so has part: feature:504768-507915:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1150341-1150420:-1:exon

position:1150341:-1
position: 1150341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1064896-1064968:-1:exon

position:1064896:-1
position: 1064896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064968:-1
position: 1064968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:846837-846941:-1:exon

position:846837:-1
position: 846837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846941:-1
position: 846941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:740998-741137:-1:exon

position:740998:-1
position: 740998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741137:-1
position: 741137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:685725-685896:-1:exon

position:685725:-1
position: 685725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685896:-1
position: 685896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:656147-656335:-1:exon

position:656147:-1
position: 656147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656335:-1
position: 656335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:574100-574229:-1:exon

position:574100:-1
position: 574100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574229:-1
position: 574229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:573094-573191:-1:exon

position:573094:-1
position: 573094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573191:-1
position: 573191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:555245-555364:-1:exon

position:555245:-1
position: 555245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555364:-1
position: 555364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:522530-522606:-1:exon

position:522530:-1
position: 522530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522606:-1
position: 522606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:517405-517583:-1:exon

position:517405:-1
position: 517405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517583:-1
position: 517583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:504768-507915:-1:exon

position:507915:-1
position: 507915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034754693.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(504768..507915,517405..517583,522530..522606,555245..555364,573094..573191,574100..574229,656147..656335,685725..685896,740998..741137,800337..800445,846837..846941,1064896..1064968,1150341..1150420))
location: region:504768-1150420:-1
so has part: feature:1150341-1150420:-1:exon
so has part: feature:1064896-1064968:-1:exon
so has part: feature:846837-846941:-1:exon
so has part: feature:800337-800445:-1:exon
so has part: feature:740998-741137:-1:exon
so has part: feature:685725-685896:-1:exon
so has part: feature:656147-656335:-1:exon
so has part: feature:574100-574229:-1:exon
so has part: feature:573094-573191:-1:exon
so has part: feature:555245-555364:-1:exon
so has part: feature:522530-522606:-1:exon
so has part: feature:517405-517583:-1:exon
so has part: feature:504768-507915:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1150341-1150420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064896-1064968:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:846837-846941:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:800337-800445:-1:exon

position:800337:-1
position: 800337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800445:-1
position: 800445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:740998-741137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685725-685896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:656147-656335:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574100-574229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:573094-573191:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555245-555364:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:522530-522606:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:517405-517583:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:504768-507915:-1:exon

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034754697.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(504768..507915,517405..517583,522530..522606,555245..555364,573094..573191,574100..574229,656147..656335,685725..685896,740998..741137,800337..800445,846837..846941,848872..848964,1064896..1064968,1150341..1150420))
location: region:504768-1150420:-1
so has part: feature:1150341-1150420:-1:exon
so has part: feature:1064896-1064968:-1:exon
so has part: feature:848872-848964:-1:exon
so has part: feature:846837-846941:-1:exon
so has part: feature:800337-800445:-1:exon
so has part: feature:740998-741137:-1:exon
so has part: feature:685725-685896:-1:exon
so has part: feature:656147-656335:-1:exon
so has part: feature:574100-574229:-1:exon
so has part: feature:573094-573191:-1:exon
so has part: feature:555245-555364:-1:exon
so has part: feature:522530-522606:-1:exon
so has part: feature:517405-517583:-1:exon
so has part: feature:504768-507915:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1150341-1150420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064896-1064968:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:848872-848964:-1:exon

position:848872:-1
position: 848872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848964:-1
position: 848964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:846837-846941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:800337-800445:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740998-741137:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:685725-685896:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:656147-656335:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:574100-574229:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:573094-573191:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:555245-555364:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:522530-522606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:517405-517583:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:504768-507915:-1:exon

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034754696.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(504768..507915,517405..517583,522530..522606,555245..555364,573094..573191,574100..574229,656147..656335,685725..685896,740998..741137,800337..800445,846837..846941,1064896..1064965,1148307..1148414))
location: region:504768-1148414:-1
so has part: feature:1148307-1148414:-1:exon
so has part: feature:1064896-1064965:-1:exon
so has part: feature:846837-846941:-1:exon
so has part: feature:800337-800445:-1:exon
so has part: feature:740998-741137:-1:exon
so has part: feature:685725-685896:-1:exon
so has part: feature:656147-656335:-1:exon
so has part: feature:574100-574229:-1:exon
so has part: feature:573094-573191:-1:exon
so has part: feature:555245-555364:-1:exon
so has part: feature:522530-522606:-1:exon
so has part: feature:517405-517583:-1:exon
so has part: feature:504768-507915:-1:exon

position:1148414:-1
position: 1148414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1148307-1148414:-1:exon

position:1148307:-1
position: 1148307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1064896-1064965:-1:exon

position:1064965:-1
position: 1064965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:846837-846941:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:800337-800445:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740998-741137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685725-685896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:656147-656335:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574100-574229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:573094-573191:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555245-555364:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:522530-522606:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:517405-517583:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:504768-507915:-1:exon

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034754694.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(504768..507915,517405..517583,522530..522606,555245..555364,573094..573191,574100..574229,656147..656335,685725..685896,740998..741137,800337..800445,846837..846941,1064896..1064968,1148307..1148414))
location: region:504768-1148414:-1
so has part: feature:1148307-1148414:-1:exon
so has part: feature:1064896-1064968:-1:exon
so has part: feature:846837-846941:-1:exon
so has part: feature:800337-800445:-1:exon
so has part: feature:740998-741137:-1:exon
so has part: feature:685725-685896:-1:exon
so has part: feature:656147-656335:-1:exon
so has part: feature:574100-574229:-1:exon
so has part: feature:573094-573191:-1:exon
so has part: feature:555245-555364:-1:exon
so has part: feature:522530-522606:-1:exon
so has part: feature:517405-517583:-1:exon
so has part: feature:504768-507915:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1148307-1148414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064896-1064968:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:846837-846941:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:800337-800445:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740998-741137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685725-685896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:656147-656335:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574100-574229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:573094-573191:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555245-555364:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:522530-522606:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:517405-517583:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:504768-507915:-1:exon

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034754695.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(504768..507915,517405..517583,522530..522606,555245..555364,573094..573191,574100..574229,656147..656335,685725..685896,740998..741137,800337..800445,846837..846941,1064896..1064968,1085960..1086086))
location: region:504768-1086086:-1
so has part: feature:1085960-1086086:-1:exon
so has part: feature:1064896-1064968:-1:exon
so has part: feature:846837-846941:-1:exon
so has part: feature:800337-800445:-1:exon
so has part: feature:740998-741137:-1:exon
so has part: feature:685725-685896:-1:exon
so has part: feature:656147-656335:-1:exon
so has part: feature:574100-574229:-1:exon
so has part: feature:573094-573191:-1:exon
so has part: feature:555245-555364:-1:exon
so has part: feature:522530-522606:-1:exon
so has part: feature:517405-517583:-1:exon
so has part: feature:504768-507915:-1:exon

position:1086086:-1
position: 1086086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1085960-1086086:-1:exon

position:1085960:-1
position: 1085960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1064896-1064968:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:846837-846941:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:800337-800445:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740998-741137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685725-685896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:656147-656335:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574100-574229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:573094-573191:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555245-555364:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:522530-522606:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:517405-517583:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:504768-507915:-1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2 isoform X1
translation: MMQHVSPAPALTMMATQSVPPPPYQDSQQMTATAQQPAKAQPVHITTPSAAANTPVPSTPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNQPSINLHPQDLLQNSPNSMTAVANNPQGIVVPASALQPGNISMTTVNSQVVSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDSEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGVNPTTNPDGSLIMDNLQSLSSDNATIAMQQAMMAAHDDSLDGTEDEEEDEMEEEEEEELEEDNDELQTTNVNDLGLEHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(507689..507915,517405..517583,522530..522606,555245..555364,573094..573191,574100..574229,656147..656335,685725..685896,740998..741137,800337..800423))
location: region:507689-800423:-1
so has part: feature:800337-800423:-1:exon
so has part: feature:740998-741137:-1:exon
so has part: feature:685725-685896:-1:exon
so has part: feature:656147-656335:-1:exon
so has part: feature:574100-574229:-1:exon
so has part: feature:573094-573191:-1:exon
so has part: feature:555245-555364:-1:exon
so has part: feature:522530-522606:-1:exon
so has part: feature:517405-517583:-1:exon
so has part: feature:507689-507915:-1:exon

XP_034610584.1
type: Protein
SIO_000068: ncbiprotein

position:507689:-1
position: 507689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800423:-1
position: 800423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:800337-800423:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740998-741137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685725-685896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:656147-656335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574100-574229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573094-573191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555245-555364:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522530-522606:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:517405-517583:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:507689-507915:-1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2 isoform X1
translation: MMQHVSPAPALTMMATQSVPPPPYQDSQQMTATAQQPAKAQPVHITTPSAAANTPVPSTPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNQPSINLHPQDLLQNSPNSMTAVANNPQGIVVPASALQPGNISMTTVNSQVVSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDSEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGVNPTTNPDGSLIMDNLQSLSSDNATIAMQQAMMAAHDDSLDGTEDEEEDEMEEEEEEELEEDNDELQTTNVNDLGLEHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(507689..507915,517405..517583,522530..522606,555245..555364,573094..573191,574100..574229,656147..656335,685725..685896,740998..741137,800337..800423))
location: region:507689-800423:-1
so has part: feature:800337-800423:-1:exon
so has part: feature:740998-741137:-1:exon
so has part: feature:685725-685896:-1:exon
so has part: feature:656147-656335:-1:exon
so has part: feature:574100-574229:-1:exon
so has part: feature:573094-573191:-1:exon
so has part: feature:555245-555364:-1:exon
so has part: feature:522530-522606:-1:exon
so has part: feature:517405-517583:-1:exon
so has part: feature:507689-507915:-1:exon

XP_034610585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:800337-800423:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740998-741137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685725-685896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:656147-656335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574100-574229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573094-573191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555245-555364:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522530-522606:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:517405-517583:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:507689-507915:-1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2 isoform X1
translation: MMQHVSPAPALTMMATQSVPPPPYQDSQQMTATAQQPAKAQPVHITTPSAAANTPVPSTPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNQPSINLHPQDLLQNSPNSMTAVANNPQGIVVPASALQPGNISMTTVNSQVVSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDSEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGVNPTTNPDGSLIMDNLQSLSSDNATIAMQQAMMAAHDDSLDGTEDEEEDEMEEEEEEELEEDNDELQTTNVNDLGLEHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(507689..507915,517405..517583,522530..522606,555245..555364,573094..573191,574100..574229,656147..656335,685725..685896,740998..741137,800337..800423))
location: region:507689-800423:-1
so has part: feature:800337-800423:-1:exon
so has part: feature:740998-741137:-1:exon
so has part: feature:685725-685896:-1:exon
so has part: feature:656147-656335:-1:exon
so has part: feature:574100-574229:-1:exon
so has part: feature:573094-573191:-1:exon
so has part: feature:555245-555364:-1:exon
so has part: feature:522530-522606:-1:exon
so has part: feature:517405-517583:-1:exon
so has part: feature:507689-507915:-1:exon

XP_034610586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:800337-800423:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740998-741137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685725-685896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:656147-656335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574100-574229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573094-573191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555245-555364:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522530-522606:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:517405-517583:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:507689-507915:-1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2 isoform X1
translation: MMQHVSPAPALTMMATQSVPPPPYQDSQQMTATAQQPAKAQPVHITTPSAAANTPVPSTPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNQPSINLHPQDLLQNSPNSMTAVANNPQGIVVPASALQPGNISMTTVNSQVVSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDSEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGVNPTTNPDGSLIMDNLQSLSSDNATIAMQQAMMAAHDDSLDGTEDEEEDEMEEEEEEELEEDNDELQTTNVNDLGLEHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(507689..507915,517405..517583,522530..522606,555245..555364,573094..573191,574100..574229,656147..656335,685725..685896,740998..741137,800337..800423))
location: region:507689-800423:-1
so has part: feature:800337-800423:-1:exon
so has part: feature:740998-741137:-1:exon
so has part: feature:685725-685896:-1:exon
so has part: feature:656147-656335:-1:exon
so has part: feature:574100-574229:-1:exon
so has part: feature:573094-573191:-1:exon
so has part: feature:555245-555364:-1:exon
so has part: feature:522530-522606:-1:exon
so has part: feature:517405-517583:-1:exon
so has part: feature:507689-507915:-1:exon

XP_034610587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:800337-800423:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740998-741137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685725-685896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:656147-656335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574100-574229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573094-573191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555245-555364:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522530-522606:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:517405-517583:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:507689-507915:-1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2 isoform X1
translation: MMQHVSPAPALTMMATQSVPPPPYQDSQQMTATAQQPAKAQPVHITTPSAAANTPVPSTPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNQPSINLHPQDLLQNSPNSMTAVANNPQGIVVPASALQPGNISMTTVNSQVVSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDSEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGVNPTTNPDGSLIMDNLQSLSSDNATIAMQQAMMAAHDDSLDGTEDEEEDEMEEEEEEELEEDNDELQTTNVNDLGLEHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(507689..507915,517405..517583,522530..522606,555245..555364,573094..573191,574100..574229,656147..656335,685725..685896,740998..741137,800337..800423))
location: region:507689-800423:-1
so has part: feature:800337-800423:-1:exon
so has part: feature:740998-741137:-1:exon
so has part: feature:685725-685896:-1:exon
so has part: feature:656147-656335:-1:exon
so has part: feature:574100-574229:-1:exon
so has part: feature:573094-573191:-1:exon
so has part: feature:555245-555364:-1:exon
so has part: feature:522530-522606:-1:exon
so has part: feature:517405-517583:-1:exon
so has part: feature:507689-507915:-1:exon

XP_034610588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:800337-800423:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740998-741137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685725-685896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:656147-656335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574100-574229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573094-573191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555245-555364:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522530-522606:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:517405-517583:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:507689-507915:-1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2 isoform X2
translation: MTATAQQPAKAQPVHITTPSAAANTPVPSTPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNQPSINLHPQDLLQNSPNSMTAVANNPQGIVVPASALQPGNISMTTVNSQVVSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDSEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGVNPTTNPDGSLIMDNLQSLSSDNATIAMQQAMMAAHDDSLDGTEDEEEDEMEEEEEEELEEDNDELQTTNVNDLGLEHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(507689..507915,517405..517583,522530..522606,555245..555364,573094..573191,574100..574229,656147..656335,685725..685896,740998..741137))
location: region:507689-741137:-1
so has part: feature:740998-741137:-1:exon
so has part: feature:685725-685896:-1:exon
so has part: feature:656147-656335:-1:exon
so has part: feature:574100-574229:-1:exon
so has part: feature:573094-573191:-1:exon
so has part: feature:555245-555364:-1:exon
so has part: feature:522530-522606:-1:exon
so has part: feature:517405-517583:-1:exon
so has part: feature:507689-507915:-1:exon

XP_034610589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:740998-741137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685725-685896:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656147-656335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:574100-574229:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573094-573191:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555245-555364:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522530-522606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:517405-517583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:507689-507915:-1:exon

LOC117868693
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868693
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1144844..1152869
location: region:1144844-1152869:1
so has part: feature:1144844-1152869:1:exon
subclass of: SO_0000010

117868693
type: Gene
SIO_000068: ncbigene

position:1144844:1
position: 1144844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152869:1
position: 1152869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144844-1152869:1:exon

LOC117868693
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868693
product: basic salivary proline-rich protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034754889.1
SIO_010081: LOC117868693
subclass of: SO_0000673
so part of: LOC117868693
location: join(1144844..1144927,1148294..1148939,1151828..1152869)
location: region:1144844-1152869:1
so has part: feature:1144844-1144927:1:exon
so has part: feature:1148294-1148939:1:exon
so has part: feature:1151828-1152869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1144844-1144927:1:exon

position:1144927:1
position: 1144927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1148294-1148939:1:exon

position:1148294:1
position: 1148294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148939:1
position: 1148939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1151828-1152869:1:exon

position:1151828:1
position: 1151828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117868693
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868693
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic salivary proline-rich protein 2-like
translation: MKRIPAHGRQTAKTPTPSALKSSIFRGQGFHSPFGFAARSPGQARHRPGQSSQLHARGSESLPTEPARRAERGPGRAEQAATAGPRRGASRQPGLSSAPLEPRAPSDTGLTARRRPAELPPLAPRDQRVRRARPAPPAWAAEPQQPGKRRCSPPDPLTGRPKHRQPHAQGSAQRPPPGSAPRCPGQLAKGDHRSGAPEPPGQPLHAALRRPPARLPRALACSEPGAAAVRASPHLSARRTAEPGESDCTRFQARSLGLCSFFYILMWH
SIO_010081: LOC117868693
subclass of: SO_0000673
so part of: LOC117868693
location: join(1144844..1144927,1148294..1148939,1151828..1151904)
location: region:1144844-1151904:1
so has part: feature:1144844-1144927:1:exon
so has part: feature:1148294-1148939:1:exon
so has part: feature:1151828-1151904:1:exon

XP_034610780.1
type: Protein
SIO_000068: ncbiprotein

position:1151904:1
position: 1151904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144844-1144927:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148294-1148939:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151828-1151904:1:exon

TMEM218
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: TMEM218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1240300..1254191
location: region:1240300-1254191:1
so has part: feature:1240300-1254191:1:exon
subclass of: SO_0000010

117868610
type: Gene
SIO_000068: ncbigene

position:1240300:1
position: 1240300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254191:1
position: 1254191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1240300-1254191:1:exon

TMEM218
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TMEM218
product: transmembrane protein 218, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_034754721.1
SIO_010081: TMEM218
subclass of: SO_0000673
so part of: TMEM218
location: join(1240300..1240588,1242418..1242528,1243590..1243692,1245126..1245159,1252546..1252683)
location: region:1240300-1252683:1
so has part: feature:1240300-1240588:1:exon
so has part: feature:1242418-1242528:1:exon
so has part: feature:1243590-1243692:1:exon
so has part: feature:1245126-1245159:1:exon
so has part: feature:1252546-1252683:1:exon

position:1252683:1
position: 1252683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1240300-1240588:1:exon

position:1240588:1
position: 1240588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1242418-1242528:1:exon

position:1242418:1
position: 1242418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1242528:1
position: 1242528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1243590-1243692:1:exon

position:1243590:1
position: 1243590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243692:1
position: 1243692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1245126-1245159:1:exon

position:1245126:1
position: 1245126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245159:1
position: 1245159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1252546-1252683:1:exon

position:1252546:1
position: 1252546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM218
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TMEM218
product: transmembrane protein 218, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034754722.1
SIO_010081: TMEM218
subclass of: SO_0000673
so part of: TMEM218
location: join(1240328..1240588,1242326..1242528,1243590..1243692,1252546..1254191)
location: region:1240328-1254191:1
so has part: feature:1240328-1240588:1:exon
so has part: feature:1242326-1242528:1:exon
so has part: feature:1243590-1243692:1:exon
so has part: feature:1252546-1254191:1:exon

position:1240328:1
position: 1240328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1240328-1240588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1242326-1242528:1:exon

position:1242326:1
position: 1242326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1243590-1243692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1252546-1254191:1:exon

TMEM218
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TMEM218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 218 isoform X2
translation: MLSLFSRMAGTVLGVGPGVFIIALLCVLMLLLCMLLSRTSGLARFSVIMVFFSAVIVILVLLLFPRASEFPAPATEMKIVDTFFIGRYVLVSLLSVTFLGSLFLVLVHHILEPVYAKPL
SIO_010081: TMEM218
subclass of: SO_0000673
so part of: TMEM218
location: join(1242398..1242528,1243590..1243692,1252546..1252671)
location: region:1242398-1252671:1
so has part: feature:1242398-1242528:1:exon
so has part: feature:1243590-1243692:1:exon
so has part: feature:1252546-1252671:1:exon

XP_034610613.1
type: Protein
SIO_000068: ncbiprotein

position:1242398:1
position: 1242398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252671:1
position: 1252671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1242398-1242528:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1243590-1243692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1252546-1252671:1:exon

TMEM218
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TMEM218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 218 isoform X1
translation: MAGTVLGVGPGVFIIALLCVLMLLLCMLLSRTSGLARFSVIMVFFSAVIVILVLLLFPRASEFPAPATEMKSHWLPGLSPPSYRGHLLYWPLRPGLPSQCDVSRKPVPGSGSPYLGASVC
SIO_010081: TMEM218
subclass of: SO_0000673
so part of: TMEM218
location: join(1242419..1242528,1243590..1243692,1245126..1245159,1252546..1252661)
location: region:1242419-1252661:1
so has part: feature:1242419-1242528:1:exon
so has part: feature:1243590-1243692:1:exon
so has part: feature:1245126-1245159:1:exon
so has part: feature:1252546-1252661:1:exon

XP_034610612.1
type: Protein
SIO_000068: ncbiprotein

position:1242419:1
position: 1242419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252661:1
position: 1252661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1242419-1242528:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1243590-1243692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1245126-1245159:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1252546-1252661:1:exon

SLC37A2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SLC37A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1340870..1400172)
location: region:1340870-1400172:-1
so has part: feature:1340870-1400172:-1:exon
subclass of: SO_0000010

117868617
type: Gene
SIO_000068: ncbigene

position:1340870:-1
position: 1340870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1400172:-1
position: 1400172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340870-1400172:-1:exon

SLC37A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SLC37A2
product: solute carrier family 37 member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_034754735.1
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: complement(join(1340870..1341204,1344007..1344071,1345647..1345744,1346770..1346848,1349282..1349355,1350822..1350870,1353758..1353843,1354535..1354597,1355197..1355287,1360371..1360526,1362779..1362816,1365531..1365697,1367458..1367534,1371243..1371378,1372893..1372971,1374600..1374687,1375431..1375512,1399908..1400172))
location: region:1340870-1400172:-1
so has part: feature:1399908-1400172:-1:exon
so has part: feature:1375431-1375512:-1:exon
so has part: feature:1374600-1374687:-1:exon
so has part: feature:1372893-1372971:-1:exon
so has part: feature:1371243-1371378:-1:exon
so has part: feature:1367458-1367534:-1:exon
so has part: feature:1365531-1365697:-1:exon
so has part: feature:1362779-1362816:-1:exon
so has part: feature:1360371-1360526:-1:exon
so has part: feature:1355197-1355287:-1:exon
so has part: feature:1354535-1354597:-1:exon
so has part: feature:1353758-1353843:-1:exon
so has part: feature:1350822-1350870:-1:exon
so has part: feature:1349282-1349355:-1:exon
so has part: feature:1346770-1346848:-1:exon
so has part: feature:1345647-1345744:-1:exon
so has part: feature:1344007-1344071:-1:exon
so has part: feature:1340870-1341204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1399908-1400172:-1:exon

position:1399908:-1
position: 1399908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1375431-1375512:-1:exon

position:1375431:-1
position: 1375431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375512:-1
position: 1375512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1374600-1374687:-1:exon

position:1374600:-1
position: 1374600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1374687:-1
position: 1374687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1372893-1372971:-1:exon

position:1372893:-1
position: 1372893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1372971:-1
position: 1372971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1371243-1371378:-1:exon

position:1371243:-1
position: 1371243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371378:-1
position: 1371378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1367458-1367534:-1:exon

position:1367458:-1
position: 1367458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367534:-1
position: 1367534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1365531-1365697:-1:exon

position:1365531:-1
position: 1365531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365697:-1
position: 1365697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1362779-1362816:-1:exon

position:1362779:-1
position: 1362779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362816:-1
position: 1362816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1360371-1360526:-1:exon

position:1360371:-1
position: 1360371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360526:-1
position: 1360526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1355197-1355287:-1:exon

position:1355197:-1
position: 1355197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355287:-1
position: 1355287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1354535-1354597:-1:exon

position:1354535:-1
position: 1354535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354597:-1
position: 1354597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1353758-1353843:-1:exon

position:1353758:-1
position: 1353758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353843:-1
position: 1353843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1350822-1350870:-1:exon

position:1350822:-1
position: 1350822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350870:-1
position: 1350870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1349282-1349355:-1:exon

position:1349282:-1
position: 1349282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349355:-1
position: 1349355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1346770-1346848:-1:exon

position:1346770:-1
position: 1346770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346848:-1
position: 1346848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1345647-1345744:-1:exon

position:1345647:-1
position: 1345647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345744:-1
position: 1345744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1344007-1344071:-1:exon

position:1344007:-1
position: 1344007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344071:-1
position: 1344071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1340870-1341204:-1:exon

position:1341204:-1
position: 1341204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC37A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SLC37A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate exchanger SLC37A2 isoform X2
translation: MRSSLAPGIRLIRALPRESWYRGLTLVLTFLFYASFHLSRKPISIVKSELHTNCTSPGMIPPNGTNSTTWCDWAPFDQANYKELFGALDNAFLVAYAIGMFISGIFGERLPLRYYLSGGMVLSGLFTSLFGLAYFWEIHVLWYYILIQICNGLVQTTGWPSVVTCVGNWFGKGKRGLIMGIWNSHTSVGNILGSLIAGVWVSSTWGLSFIVPGIIIAVMGIVCFLFLVEYPEDVDCNPPLHHTESEESEEKDPEVTLSTDDGSCSRENTDSSEYPKEPAEQPEAISFLGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIVNVAHFGAKEAGDLSTLFDVGGILGGILAGLISDYTGGRATTCCVMLIVAAPMLFLYNHVGQNGIGSSVAMLIICGALVNGPYALITTAVSADLGTHECLKGNAKALSTVTAIIDGTGSIGAALGPLLAGLISPTGWNNVFYMLITADILACLFLSRVVYKEIRGWCGCYTRKRGFKEF
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: complement(join(1341189..1341204,1344007..1344071,1345647..1345744,1346770..1346848,1349282..1349355,1350822..1350870,1353758..1353843,1354535..1354597,1355197..1355287,1360371..1360526,1362779..1362816,1365531..1365697,1367458..1367534,1371243..1371378,1372893..1372971,1374600..1374687,1375431..1375512,1399908..1399966))
location: region:1341189-1399966:-1
so has part: feature:1399908-1399966:-1:exon
so has part: feature:1375431-1375512:-1:exon
so has part: feature:1374600-1374687:-1:exon
so has part: feature:1372893-1372971:-1:exon
so has part: feature:1371243-1371378:-1:exon
so has part: feature:1367458-1367534:-1:exon
so has part: feature:1365531-1365697:-1:exon
so has part: feature:1362779-1362816:-1:exon
so has part: feature:1360371-1360526:-1:exon
so has part: feature:1355197-1355287:-1:exon
so has part: feature:1354535-1354597:-1:exon
so has part: feature:1353758-1353843:-1:exon
so has part: feature:1350822-1350870:-1:exon
so has part: feature:1349282-1349355:-1:exon
so has part: feature:1346770-1346848:-1:exon
so has part: feature:1345647-1345744:-1:exon
so has part: feature:1344007-1344071:-1:exon
so has part: feature:1341189-1341204:-1:exon

XP_034610626.1
type: Protein
SIO_000068: ncbiprotein

position:1341189:-1
position: 1341189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399966:-1
position: 1399966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1399908-1399966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375431-1375512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1374600-1374687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1372893-1372971:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1371243-1371378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1367458-1367534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1365531-1365697:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362779-1362816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1360371-1360526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1355197-1355287:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1354535-1354597:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1353758-1353843:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1350822-1350870:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1349282-1349355:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1346770-1346848:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1345647-1345744:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1344007-1344071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1341189-1341204:-1:exon

SLC37A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SLC37A2
product: solute carrier family 37 member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_034754734.1
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: complement(join(1341211..1344071,1345647..1345744,1346770..1346848,1349282..1349355,1350822..1350870,1353758..1353843,1354535..1354597,1355197..1355287,1360371..1360526,1362779..1362816,1365531..1365697,1367458..1367534,1371243..1371378,1372893..1372971,1374600..1374687,1375431..1375512,1399908..1400125))
location: region:1341211-1400125:-1
so has part: feature:1399908-1400125:-1:exon
so has part: feature:1375431-1375512:-1:exon
so has part: feature:1374600-1374687:-1:exon
so has part: feature:1372893-1372971:-1:exon
so has part: feature:1371243-1371378:-1:exon
so has part: feature:1367458-1367534:-1:exon
so has part: feature:1365531-1365697:-1:exon
so has part: feature:1362779-1362816:-1:exon
so has part: feature:1360371-1360526:-1:exon
so has part: feature:1355197-1355287:-1:exon
so has part: feature:1354535-1354597:-1:exon
so has part: feature:1353758-1353843:-1:exon
so has part: feature:1350822-1350870:-1:exon
so has part: feature:1349282-1349355:-1:exon
so has part: feature:1346770-1346848:-1:exon
so has part: feature:1345647-1345744:-1:exon
so has part: feature:1341211-1344071:-1:exon

position:1341211:-1
position: 1341211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1400125:-1
position: 1400125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1399908-1400125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375431-1375512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1374600-1374687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1372893-1372971:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1371243-1371378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1367458-1367534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1365531-1365697:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362779-1362816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1360371-1360526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1355197-1355287:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1354535-1354597:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1353758-1353843:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1350822-1350870:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1349282-1349355:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1346770-1346848:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1345647-1345744:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1341211-1344071:-1:exon

SLC37A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SLC37A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate exchanger SLC37A2 isoform X1
translation: MRSSLAPGIRLIRALPRESWYRGLTLVLTFLFYASFHLSRKPISIVKSELHTNCTSPGMIPPNGTNSTTWCDWAPFDQANYKELFGALDNAFLVAYAIGMFISGIFGERLPLRYYLSGGMVLSGLFTSLFGLAYFWEIHVLWYYILIQICNGLVQTTGWPSVVTCVGNWFGKGKRGLIMGIWNSHTSVGNILGSLIAGVWVSSTWGLSFIVPGIIIAVMGIVCFLFLVEYPEDVDCNPPLHHTESEESEEKDPEVTLSTDDGSCSRENTDSSEYPKEPAEQPEAISFLGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIVNVAHFGAKEAGDLSTLFDVGGILGGILAGLISDYTGGRATTCCVMLIVAAPMLFLYNHVGQNGIGSSVAMLIICGALVNGPYALITTAVSADLGTHECLKGNAKALSTVTAIIDGTGSIGAALGPLLAGLISPTGWNNVFYMLITADILACLFLSRVVYKEIRGWCGCYTRKRGYVLLKSQVCRVFL
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: complement(join(1343964..1344071,1345647..1345744,1346770..1346848,1349282..1349355,1350822..1350870,1353758..1353843,1354535..1354597,1355197..1355287,1360371..1360526,1362779..1362816,1365531..1365697,1367458..1367534,1371243..1371378,1372893..1372971,1374600..1374687,1375431..1375512,1399908..1399966))
location: region:1343964-1399966:-1
so has part: feature:1399908-1399966:-1:exon
so has part: feature:1375431-1375512:-1:exon
so has part: feature:1374600-1374687:-1:exon
so has part: feature:1372893-1372971:-1:exon
so has part: feature:1371243-1371378:-1:exon
so has part: feature:1367458-1367534:-1:exon
so has part: feature:1365531-1365697:-1:exon
so has part: feature:1362779-1362816:-1:exon
so has part: feature:1360371-1360526:-1:exon
so has part: feature:1355197-1355287:-1:exon
so has part: feature:1354535-1354597:-1:exon
so has part: feature:1353758-1353843:-1:exon
so has part: feature:1350822-1350870:-1:exon
so has part: feature:1349282-1349355:-1:exon
so has part: feature:1346770-1346848:-1:exon
so has part: feature:1345647-1345744:-1:exon
so has part: feature:1343964-1344071:-1:exon

XP_034610625.1
type: Protein
SIO_000068: ncbiprotein

position:1343964:-1
position: 1343964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1399908-1399966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375431-1375512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1374600-1374687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1372893-1372971:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1371243-1371378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1367458-1367534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1365531-1365697:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362779-1362816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1360371-1360526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1355197-1355287:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1354535-1354597:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1353758-1353843:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1350822-1350870:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1349282-1349355:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1346770-1346848:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1345647-1345744:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1343964-1344071:-1:exon

CCDC15
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1496632..1530912)
location: region:1496632-1530912:-1
so has part: feature:1496632-1530912:-1:exon
subclass of: SO_0000010

117868641
type: Gene
SIO_000068: ncbigene

position:1496632:-1
position: 1496632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1530912:-1
position: 1530912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1496632-1530912:-1:exon

CCDC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CCDC15
product: coiled-coil domain containing 15, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034754776.1
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(1496632..1497665,1499523..1499671,1499792..1499971,1513229..1513332,1516739..1516858,1519385..1519549,1521871..1521987,1523921..1524130,1525065..1525214,1529610..1529841,1530867..1530912))
location: region:1496632-1530912:-1
so has part: feature:1530867-1530912:-1:exon
so has part: feature:1529610-1529841:-1:exon
so has part: feature:1525065-1525214:-1:exon
so has part: feature:1523921-1524130:-1:exon
so has part: feature:1521871-1521987:-1:exon
so has part: feature:1519385-1519549:-1:exon
so has part: feature:1516739-1516858:-1:exon
so has part: feature:1513229-1513332:-1:exon
so has part: feature:1499792-1499971:-1:exon
so has part: feature:1499523-1499671:-1:exon
so has part: feature:1496632-1497665:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1530867-1530912:-1:exon

position:1530867:-1
position: 1530867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1529610-1529841:-1:exon

position:1529610:-1
position: 1529610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1529841:-1
position: 1529841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1525065-1525214:-1:exon

position:1525065:-1
position: 1525065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525214:-1
position: 1525214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1523921-1524130:-1:exon

position:1523921:-1
position: 1523921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524130:-1
position: 1524130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1521871-1521987:-1:exon

position:1521871:-1
position: 1521871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1521987:-1
position: 1521987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1519385-1519549:-1:exon

position:1519385:-1
position: 1519385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1519549:-1
position: 1519549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1516739-1516858:-1:exon

position:1516739:-1
position: 1516739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1516858:-1
position: 1516858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1513229-1513332:-1:exon

position:1513229:-1
position: 1513229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513332:-1
position: 1513332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1499792-1499971:-1:exon

position:1499792:-1
position: 1499792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499971:-1
position: 1499971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1499523-1499671:-1:exon

position:1499523:-1
position: 1499523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499671:-1
position: 1499671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1496632-1497665:-1:exon

position:1497665:-1
position: 1497665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CCDC15
product: coiled-coil domain containing 15, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_034754773.1
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(1496632..1497665,1499523..1499671,1499792..1499971,1513229..1513332,1516739..1516858,1519385..1519549,1521871..1521987,1523921..1524130,1525065..1525214,1529610..1529841,1530500..1530591))
location: region:1496632-1530591:-1
so has part: feature:1530500-1530591:-1:exon
so has part: feature:1529610-1529841:-1:exon
so has part: feature:1525065-1525214:-1:exon
so has part: feature:1523921-1524130:-1:exon
so has part: feature:1521871-1521987:-1:exon
so has part: feature:1519385-1519549:-1:exon
so has part: feature:1516739-1516858:-1:exon
so has part: feature:1513229-1513332:-1:exon
so has part: feature:1499792-1499971:-1:exon
so has part: feature:1499523-1499671:-1:exon
so has part: feature:1496632-1497665:-1:exon

position:1530591:-1
position: 1530591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1530500-1530591:-1:exon

position:1530500:-1
position: 1530500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1529610-1529841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1525065-1525214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1523921-1524130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1521871-1521987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1519385-1519549:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1516739-1516858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1513229-1513332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1499792-1499971:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499523-1499671:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1496632-1497665:-1:exon

CCDC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CCDC15
product: coiled-coil domain containing 15, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034754775.1
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(1496632..1497665,1499523..1499671,1499792..1499971,1513229..1513332,1516739..1516858,1519385..1519549,1521871..1521987,1523921..1524130,1525065..1525214,1529610..1529841,1530531..1530565))
location: region:1496632-1530565:-1
so has part: feature:1530531-1530565:-1:exon
so has part: feature:1529610-1529841:-1:exon
so has part: feature:1525065-1525214:-1:exon
so has part: feature:1523921-1524130:-1:exon
so has part: feature:1521871-1521987:-1:exon
so has part: feature:1519385-1519549:-1:exon
so has part: feature:1516739-1516858:-1:exon
so has part: feature:1513229-1513332:-1:exon
so has part: feature:1499792-1499971:-1:exon
so has part: feature:1499523-1499671:-1:exon
so has part: feature:1496632-1497665:-1:exon

position:1530565:-1
position: 1530565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1530531-1530565:-1:exon

position:1530531:-1
position: 1530531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1529610-1529841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1525065-1525214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1523921-1524130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1521871-1521987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1519385-1519549:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1516739-1516858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1513229-1513332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1499792-1499971:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499523-1499671:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1496632-1497665:-1:exon

CCDC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CCDC15
product: coiled-coil domain containing 15, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_034754774.1
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(1496635..1497665,1499523..1499671,1499792..1499971,1513229..1513332,1516739..1516858,1519385..1519549,1521871..1521987,1523921..1524130,1525065..1525214,1529610..1529841,1530424..1530496))
location: region:1496635-1530496:-1
so has part: feature:1530424-1530496:-1:exon
so has part: feature:1529610-1529841:-1:exon
so has part: feature:1525065-1525214:-1:exon
so has part: feature:1523921-1524130:-1:exon
so has part: feature:1521871-1521987:-1:exon
so has part: feature:1519385-1519549:-1:exon
so has part: feature:1516739-1516858:-1:exon
so has part: feature:1513229-1513332:-1:exon
so has part: feature:1499792-1499971:-1:exon
so has part: feature:1499523-1499671:-1:exon
so has part: feature:1496635-1497665:-1:exon

position:1496635:-1
position: 1496635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1530496:-1
position: 1530496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1530424-1530496:-1:exon

position:1530424:-1
position: 1530424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1529610-1529841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1525065-1525214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1523921-1524130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1521871-1521987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1519385-1519549:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1516739-1516858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1513229-1513332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1499792-1499971:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499523-1499671:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1496635-1497665:-1:exon

CCDC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 15
translation: MLPPAKQQPCARSMAVGQPVGDKARCLWMAVNQAVLAERNQSVAPVGVWVESAQAGGRWEESIAFASAFQVEEELKEQQKEKEENLKRFQGEVKQRVNQQIKMRRKQQLQKSCEAAEKESSVVMRCSDSALHLTPKRNTCVYRSNAASAICSSGTNLIPVQQLRASWEEEGREKQSQLFYQQANTLSKTMKQVRRRLASCKTVPKGAGPPELPGGVWGVSTSRNKPVSHRPTRVHGEECEEFPLAGHHDLPAELQNQATTKNQAEQGDDNLYYKLEFGKLYNGLMKVSDPAGPSSGLSTDFQAPLVLWPGIDKEETKKQRQNQYLRYRRLFMDIEREQVKEQQRQKERQKKIAKIKSEKEHQRRAEEQKIQEMAYQQDTCSGEKACEILAQLRLEERRVRKSKEKQQRNKEYMRYMEALRAQMREKIKLYNIDLPPLCCCGSDFWDSHPDTCANNCVFYKNHKAYARALQSVISSCDISDGNSTTRLAIHNLASVHAPSVKNP
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(1497544..1497665,1499523..1499671,1499792..1499971,1513229..1513332,1516739..1516858,1519385..1519549,1521871..1521987,1523921..1524130,1525065..1525214,1529610..1529804))
location: region:1497544-1529804:-1
so has part: feature:1529610-1529804:-1:exon
so has part: feature:1525065-1525214:-1:exon
so has part: feature:1523921-1524130:-1:exon
so has part: feature:1521871-1521987:-1:exon
so has part: feature:1519385-1519549:-1:exon
so has part: feature:1516739-1516858:-1:exon
so has part: feature:1513229-1513332:-1:exon
so has part: feature:1499792-1499971:-1:exon
so has part: feature:1499523-1499671:-1:exon
so has part: feature:1497544-1497665:-1:exon

XP_034610664.1
type: Protein
SIO_000068: ncbiprotein

position:1497544:-1
position: 1497544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1529804:-1
position: 1529804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1529610-1529804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1525065-1525214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1523921-1524130:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1521871-1521987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1519385-1519549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1516739-1516858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1513229-1513332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1499792-1499971:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1499523-1499671:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1497544-1497665:-1:exon

CCDC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 15
translation: MLPPAKQQPCARSMAVGQPVGDKARCLWMAVNQAVLAERNQSVAPVGVWVESAQAGGRWEESIAFASAFQVEEELKEQQKEKEENLKRFQGEVKQRVNQQIKMRRKQQLQKSCEAAEKESSVVMRCSDSALHLTPKRNTCVYRSNAASAICSSGTNLIPVQQLRASWEEEGREKQSQLFYQQANTLSKTMKQVRRRLASCKTVPKGAGPPELPGGVWGVSTSRNKPVSHRPTRVHGEECEEFPLAGHHDLPAELQNQATTKNQAEQGDDNLYYKLEFGKLYNGLMKVSDPAGPSSGLSTDFQAPLVLWPGIDKEETKKQRQNQYLRYRRLFMDIEREQVKEQQRQKERQKKIAKIKSEKEHQRRAEEQKIQEMAYQQDTCSGEKACEILAQLRLEERRVRKSKEKQQRNKEYMRYMEALRAQMREKIKLYNIDLPPLCCCGSDFWDSHPDTCANNCVFYKNHKAYARALQSVISSCDISDGNSTTRLAIHNLASVHAPSVKNP
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(1497544..1497665,1499523..1499671,1499792..1499971,1513229..1513332,1516739..1516858,1519385..1519549,1521871..1521987,1523921..1524130,1525065..1525214,1529610..1529804))
location: region:1497544-1529804:-1
so has part: feature:1529610-1529804:-1:exon
so has part: feature:1525065-1525214:-1:exon
so has part: feature:1523921-1524130:-1:exon
so has part: feature:1521871-1521987:-1:exon
so has part: feature:1519385-1519549:-1:exon
so has part: feature:1516739-1516858:-1:exon
so has part: feature:1513229-1513332:-1:exon
so has part: feature:1499792-1499971:-1:exon
so has part: feature:1499523-1499671:-1:exon
so has part: feature:1497544-1497665:-1:exon

XP_034610665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1529610-1529804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1525065-1525214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1523921-1524130:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1521871-1521987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1519385-1519549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1516739-1516858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1513229-1513332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1499792-1499971:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1499523-1499671:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1497544-1497665:-1:exon

CCDC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 15
translation: MLPPAKQQPCARSMAVGQPVGDKARCLWMAVNQAVLAERNQSVAPVGVWVESAQAGGRWEESIAFASAFQVEEELKEQQKEKEENLKRFQGEVKQRVNQQIKMRRKQQLQKSCEAAEKESSVVMRCSDSALHLTPKRNTCVYRSNAASAICSSGTNLIPVQQLRASWEEEGREKQSQLFYQQANTLSKTMKQVRRRLASCKTVPKGAGPPELPGGVWGVSTSRNKPVSHRPTRVHGEECEEFPLAGHHDLPAELQNQATTKNQAEQGDDNLYYKLEFGKLYNGLMKVSDPAGPSSGLSTDFQAPLVLWPGIDKEETKKQRQNQYLRYRRLFMDIEREQVKEQQRQKERQKKIAKIKSEKEHQRRAEEQKIQEMAYQQDTCSGEKACEILAQLRLEERRVRKSKEKQQRNKEYMRYMEALRAQMREKIKLYNIDLPPLCCCGSDFWDSHPDTCANNCVFYKNHKAYARALQSVISSCDISDGNSTTRLAIHNLASVHAPSVKNP
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(1497544..1497665,1499523..1499671,1499792..1499971,1513229..1513332,1516739..1516858,1519385..1519549,1521871..1521987,1523921..1524130,1525065..1525214,1529610..1529804))
location: region:1497544-1529804:-1
so has part: feature:1529610-1529804:-1:exon
so has part: feature:1525065-1525214:-1:exon
so has part: feature:1523921-1524130:-1:exon
so has part: feature:1521871-1521987:-1:exon
so has part: feature:1519385-1519549:-1:exon
so has part: feature:1516739-1516858:-1:exon
so has part: feature:1513229-1513332:-1:exon
so has part: feature:1499792-1499971:-1:exon
so has part: feature:1499523-1499671:-1:exon
so has part: feature:1497544-1497665:-1:exon

XP_034610666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1529610-1529804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1525065-1525214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1523921-1524130:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1521871-1521987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1519385-1519549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1516739-1516858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1513229-1513332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1499792-1499971:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1499523-1499671:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1497544-1497665:-1:exon

CCDC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 15
translation: MLPPAKQQPCARSMAVGQPVGDKARCLWMAVNQAVLAERNQSVAPVGVWVESAQAGGRWEESIAFASAFQVEEELKEQQKEKEENLKRFQGEVKQRVNQQIKMRRKQQLQKSCEAAEKESSVVMRCSDSALHLTPKRNTCVYRSNAASAICSSGTNLIPVQQLRASWEEEGREKQSQLFYQQANTLSKTMKQVRRRLASCKTVPKGAGPPELPGGVWGVSTSRNKPVSHRPTRVHGEECEEFPLAGHHDLPAELQNQATTKNQAEQGDDNLYYKLEFGKLYNGLMKVSDPAGPSSGLSTDFQAPLVLWPGIDKEETKKQRQNQYLRYRRLFMDIEREQVKEQQRQKERQKKIAKIKSEKEHQRRAEEQKIQEMAYQQDTCSGEKACEILAQLRLEERRVRKSKEKQQRNKEYMRYMEALRAQMREKIKLYNIDLPPLCCCGSDFWDSHPDTCANNCVFYKNHKAYARALQSVISSCDISDGNSTTRLAIHNLASVHAPSVKNP
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(1497544..1497665,1499523..1499671,1499792..1499971,1513229..1513332,1516739..1516858,1519385..1519549,1521871..1521987,1523921..1524130,1525065..1525214,1529610..1529804))
location: region:1497544-1529804:-1
so has part: feature:1529610-1529804:-1:exon
so has part: feature:1525065-1525214:-1:exon
so has part: feature:1523921-1524130:-1:exon
so has part: feature:1521871-1521987:-1:exon
so has part: feature:1519385-1519549:-1:exon
so has part: feature:1516739-1516858:-1:exon
so has part: feature:1513229-1513332:-1:exon
so has part: feature:1499792-1499971:-1:exon
so has part: feature:1499523-1499671:-1:exon
so has part: feature:1497544-1497665:-1:exon

XP_034610667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1529610-1529804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1525065-1525214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1523921-1524130:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1521871-1521987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1519385-1519549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1516739-1516858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1513229-1513332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1499792-1499971:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1499523-1499671:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1497544-1497665:-1:exon

HEPACAM
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: HEPACAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1531629..1624526
location: region:1531629-1624526:1
so has part: feature:1531629-1624526:1:exon
subclass of: SO_0000010

117868560
type: Gene
SIO_000068: ncbigene

position:1531629:1
position: 1531629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1624526:1
position: 1624526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1531629-1624526:1:exon

HEPACAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: HEPACAM
product: hepatic and glial cell adhesion molecule, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034754619.1
SIO_010081: HEPACAM
subclass of: SO_0000673
so part of: HEPACAM
location: join(1531629..1531691,1545097..1545296,1574086..1574427,1594797..1595078,1613836..1613929,1616609..1616682,1618742..1618812,1622005..1624526)
location: region:1531629-1624526:1
so has part: feature:1531629-1531691:1:exon
so has part: feature:1545097-1545296:1:exon
so has part: feature:1574086-1574427:1:exon
so has part: feature:1594797-1595078:1:exon
so has part: feature:1613836-1613929:1:exon
so has part: feature:1616609-1616682:1:exon
so has part: feature:1618742-1618812:1:exon
so has part: feature:1622005-1624526:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1531629-1531691:1:exon

position:1531691:1
position: 1531691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1545097-1545296:1:exon

position:1545097:1
position: 1545097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1545296:1
position: 1545296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1574086-1574427:1:exon

position:1574086:1
position: 1574086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574427:1
position: 1574427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1594797-1595078:1:exon

position:1594797:1
position: 1594797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1595078:1
position: 1595078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1613836-1613929:1:exon

position:1613836:1
position: 1613836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1613929:1
position: 1613929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1616609-1616682:1:exon

position:1616609:1
position: 1616609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1616682:1
position: 1616682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1618742-1618812:1:exon

position:1618742:1
position: 1618742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1618812:1
position: 1618812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1622005-1624526:1:exon

position:1622005:1
position: 1622005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEPACAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: HEPACAM
product: hepatic and glial cell adhesion molecule, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034754620.1
SIO_010081: HEPACAM
subclass of: SO_0000673
so part of: HEPACAM
location: join(1541954..1542362,1545097..1545296,1574086..1574427,1594797..1595078,1613836..1613929,1616609..1616682,1618742..1618812,1622005..1624526)
location: region:1541954-1624526:1
so has part: feature:1541954-1542362:1:exon
so has part: feature:1545097-1545296:1:exon
so has part: feature:1574086-1574427:1:exon
so has part: feature:1594797-1595078:1:exon
so has part: feature:1613836-1613929:1:exon
so has part: feature:1616609-1616682:1:exon
so has part: feature:1618742-1618812:1:exon
so has part: feature:1622005-1624526:1:exon

position:1541954:1
position: 1541954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1541954-1542362:1:exon

position:1542362:1
position: 1542362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1545097-1545296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1574086-1574427:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594797-1595078:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1613836-1613929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1616609-1616682:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1618742-1618812:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1622005-1624526:1:exon

HEPACAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: HEPACAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte cell adhesion molecule
translation: MKREREALSRVPSAPGFVHLVCLLLIHPGLLEGVNITSPVLLIHGTVGKPALLSVRYTSTSSDKPVVKWQLKRDKPTTVVQSIGTEIIGNLRPDYKDRIKILENGSLLISHLQLSDEGTYEVEISITDDTFTGEKNINLTVDIPISKPHVVLASSTVLELSEYFTLNCSHENGTKPTYTWMKDGKPLSNDSRLLLSHDQKVLTITRVLMSDDDIYSCLVENPISSGRSVPIKLTVYRRSSLYIILSTGGIFLLVTLVTVCACWKPSKKDKQKLDKQSSFEYMDQNEEHLKHEVEIVPRSGEHERRNPVALYILKDKDSPEADEDSPPDARTAAEQGPPSYSSSPPGRSPGPPVRSARRYHRSPARSPASSRTHKSPPRSPGSPVRSRSATRMLRTAGVHIIREQEEANSVEIKA
SIO_010081: HEPACAM
subclass of: SO_0000673
so part of: HEPACAM
location: join(1545212..1545296,1574086..1574427,1594797..1595078,1613836..1613929,1616609..1616682,1618742..1618812,1622005..1622301)
location: region:1545212-1622301:1
so has part: feature:1545212-1545296:1:exon
so has part: feature:1574086-1574427:1:exon
so has part: feature:1594797-1595078:1:exon
so has part: feature:1613836-1613929:1:exon
so has part: feature:1616609-1616682:1:exon
so has part: feature:1618742-1618812:1:exon
so has part: feature:1622005-1622301:1:exon

XP_034610510.1
type: Protein
SIO_000068: ncbiprotein

position:1545212:1
position: 1545212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1622301:1
position: 1622301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1545212-1545296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1574086-1574427:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594797-1595078:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1613836-1613929:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1616609-1616682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1618742-1618812:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1622005-1622301:1:exon

HEPACAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: HEPACAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte cell adhesion molecule
translation: MKREREALSRVPSAPGFVHLVCLLLIHPGLLEGVNITSPVLLIHGTVGKPALLSVRYTSTSSDKPVVKWQLKRDKPTTVVQSIGTEIIGNLRPDYKDRIKILENGSLLISHLQLSDEGTYEVEISITDDTFTGEKNINLTVDIPISKPHVVLASSTVLELSEYFTLNCSHENGTKPTYTWMKDGKPLSNDSRLLLSHDQKVLTITRVLMSDDDIYSCLVENPISSGRSVPIKLTVYRRSSLYIILSTGGIFLLVTLVTVCACWKPSKKDKQKLDKQSSFEYMDQNEEHLKHEVEIVPRSGEHERRNPVALYILKDKDSPEADEDSPPDARTAAEQGPPSYSSSPPGRSPGPPVRSARRYHRSPARSPASSRTHKSPPRSPGSPVRSRSATRMLRTAGVHIIREQEEANSVEIKA
SIO_010081: HEPACAM
subclass of: SO_0000673
so part of: HEPACAM
location: join(1545212..1545296,1574086..1574427,1594797..1595078,1613836..1613929,1616609..1616682,1618742..1618812,1622005..1622301)
location: region:1545212-1622301:1
so has part: feature:1545212-1545296:1:exon
so has part: feature:1574086-1574427:1:exon
so has part: feature:1594797-1595078:1:exon
so has part: feature:1613836-1613929:1:exon
so has part: feature:1616609-1616682:1:exon
so has part: feature:1618742-1618812:1:exon
so has part: feature:1622005-1622301:1:exon

XP_034610511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1545212-1545296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1574086-1574427:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594797-1595078:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1613836-1613929:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1616609-1616682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1618742-1618812:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1622005-1622301:1:exon

ROBO4
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: ROBO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1669559..1746534
location: region:1669559-1746534:1
so has part: feature:1669559-1746534:1:exon
subclass of: SO_0000010

117868606
type: Gene
SIO_000068: ncbigene

position:1669559:1
position: 1669559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1746534:1
position: 1746534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1669559-1746534:1:exon

ROBO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ROBO4
product: roundabout guidance receptor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034754714.1
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: join(1669559..1669623,1690383..1690706,1695926..1696083,1696616..1696736,1700164..1700302,1700861..1700988,1703033..1703157,1705722..1705941,1707033..1707154,1708381..1708552,1709550..1709744,1710378..1710420,1711466..1711611,1713694..1714032,1723064..1723177,1733972..1734113,1735750..1735962,1737223..1737611,1741759..1741992,1745482..1746534)
location: region:1669559-1746534:1
so has part: feature:1669559-1669623:1:exon
so has part: feature:1690383-1690706:1:exon
so has part: feature:1695926-1696083:1:exon
so has part: feature:1696616-1696736:1:exon
so has part: feature:1700164-1700302:1:exon
so has part: feature:1700861-1700988:1:exon
so has part: feature:1703033-1703157:1:exon
so has part: feature:1705722-1705941:1:exon
so has part: feature:1707033-1707154:1:exon
so has part: feature:1708381-1708552:1:exon
so has part: feature:1709550-1709744:1:exon
so has part: feature:1710378-1710420:1:exon
so has part: feature:1711466-1711611:1:exon
so has part: feature:1713694-1714032:1:exon
so has part: feature:1723064-1723177:1:exon
so has part: feature:1733972-1734113:1:exon
so has part: feature:1735750-1735962:1:exon
so has part: feature:1737223-1737611:1:exon
so has part: feature:1741759-1741992:1:exon
so has part: feature:1745482-1746534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1669559-1669623:1:exon

position:1669623:1
position: 1669623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1690383-1690706:1:exon

position:1690383:1
position: 1690383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690706:1
position: 1690706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1695926-1696083:1:exon

position:1695926:1
position: 1695926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696083:1
position: 1696083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1696616-1696736:1:exon

position:1696616:1
position: 1696616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696736:1
position: 1696736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1700164-1700302:1:exon

position:1700164:1
position: 1700164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1700302:1
position: 1700302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1700861-1700988:1:exon

position:1700861:1
position: 1700861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1700988:1
position: 1700988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1703033-1703157:1:exon

position:1703033:1
position: 1703033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1703157:1
position: 1703157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1705722-1705941:1:exon

position:1705722:1
position: 1705722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1705941:1
position: 1705941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1707033-1707154:1:exon

position:1707033:1
position: 1707033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1707154:1
position: 1707154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1708381-1708552:1:exon

position:1708381:1
position: 1708381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1708552:1
position: 1708552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1709550-1709744:1:exon

position:1709550:1
position: 1709550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1709744:1
position: 1709744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1710378-1710420:1:exon

position:1710378:1
position: 1710378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1710420:1
position: 1710420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1711466-1711611:1:exon

position:1711466:1
position: 1711466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1711611:1
position: 1711611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1713694-1714032:1:exon

position:1713694:1
position: 1713694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1714032:1
position: 1714032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1723064-1723177:1:exon

position:1723064:1
position: 1723064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1723177:1
position: 1723177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1733972-1734113:1:exon

position:1733972:1
position: 1733972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1734113:1
position: 1734113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1735750-1735962:1:exon

position:1735750:1
position: 1735750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1735962:1
position: 1735962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1737223-1737611:1:exon

position:1737223:1
position: 1737223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1737611:1
position: 1737611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1741759-1741992:1:exon

position:1741759:1
position: 1741759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1741992:1
position: 1741992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1745482-1746534:1:exon

position:1745482:1
position: 1745482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ROBO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ROBO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 4 isoform X2
translation: MATVGRIEHNGSWKRSKSHSEEFPPYIIDHPTDLVVRWDQPATLNCRVAGSPAPTIEWYRNGEYVETSKDNVYSQRTLLPDGSLFFLRLNQRKGQSDEGVYTCVAMNHLGTASSKNASLYIAALREDFRLQPSNLLVTVGEQVLLECAPPRGHPEPTISWKKDGVPISQKAGHYEVSSGKLLMVHAQRSDAGLYVCVASNQAGQRESKAALVSVLEKPTFTRRPNDIVAKFGSTVQLGCGVEGDPLPKVWWHKEHGELPWGRHEVDEENTLRIHYVTTFDSGRYICTAQNQVGTASAKASLTVQDPLDTGQREWPKDVPREMMDVQLYLDNSTALPSSPAVYLHWKVIRPSQHTEGHAVLYRSLLPVSTDWVEWKVPREHGIVIPALKRGYKYEFKVRPYAGKVYGPDSNVRHLWIPEEVPSAAPQHVTITAVEDGNGTALISWDPPPHHAHNGIIRGYKVWYLGNETHHRSNRTVDGGTHSLETVLLPAGVKYCIQVAAFNGAGLGVPSNATCSSVEPLVGQTARTPAVLSVSHILAVIRQPVFIASVGSLLWLVLMVLAVYLCQHHARHYSREQQHALGKGLCRYSSEDTIVKHAMDVSDSPWLADRWKATSCSKTFSSSNSSRSSSQLLWAETKDSLDFHRSTVSFDRPSQSSQIPAVPRGPDSSSLYRVLYVDLPAKDMQTFHRPPLPSTPGPHRRAAEPGGPTDPRLGPRYRQSLGVESSCARGAEKRGLWKPAGPGPPSLTLQGPLESSSKRELQQAHSTPVLSPSLPAYSTSPSRAPSTSSSGKRHAGKGEETKVLKTFSSPKLLQSRGSLHGTGTLPPPPAPPTPHGPQGQGMQPESRDGGEAARPFPAGELQPSTKDALRSVLPSPSLPYRAASPAPSLGDDGEAVLTPDQVAAYLELSAEAECQRHRQESTFSPPHTYGYICGPLRSELGAGPAPEEDDDPDAEGSGCQSMPFLHRYCRRPSSSRSEAEGSLGGSLLNGWGSVSEENFTSTRCSLVSSSDGSFLVDANFAQALAVAVDSFCFGLSPSEAEQAYPDFSPPASPLDGLLPRPERWEGVAWAGAEPLPLPTWEWSTGWLEDMEAKYSQRPEGTPAAEKPEGKAALNGTRPLAGPNGACMAESSSPTAGTMGECQPPCPAAHSPMPNSSAIPRRGEKTRVVLQSLDAGATGVQA
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: join(1669581..1669623,1690383..1690706,1695926..1696083,1696616..1696736,1700164..1700302,1700861..1700988,1703033..1703157,1705722..1705941,1707033..1707154,1708381..1708552,1709550..1709744,1710378..1710420,1711466..1711611,1713694..1714032,1723064..1723177,1733972..1734113,1735750..1735962,1737223..1737611,1741759..1741992,1745482..1745657)
location: region:1669581-1745657:1
so has part: feature:1669581-1669623:1:exon
so has part: feature:1690383-1690706:1:exon
so has part: feature:1695926-1696083:1:exon
so has part: feature:1696616-1696736:1:exon
so has part: feature:1700164-1700302:1:exon
so has part: feature:1700861-1700988:1:exon
so has part: feature:1703033-1703157:1:exon
so has part: feature:1705722-1705941:1:exon
so has part: feature:1707033-1707154:1:exon
so has part: feature:1708381-1708552:1:exon
so has part: feature:1709550-1709744:1:exon
so has part: feature:1710378-1710420:1:exon
so has part: feature:1711466-1711611:1:exon
so has part: feature:1713694-1714032:1:exon
so has part: feature:1723064-1723177:1:exon
so has part: feature:1733972-1734113:1:exon
so has part: feature:1735750-1735962:1:exon
so has part: feature:1737223-1737611:1:exon
so has part: feature:1741759-1741992:1:exon
so has part: feature:1745482-1745657:1:exon

XP_034610605.1
type: Protein
SIO_000068: ncbiprotein

position:1669581:1
position: 1669581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1745657:1
position: 1745657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1669581-1669623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1690383-1690706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695926-1696083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1696616-1696736:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1700164-1700302:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1700861-1700988:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1703033-1703157:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1705722-1705941:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1707033-1707154:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1708381-1708552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1709550-1709744:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1710378-1710420:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1711466-1711611:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1713694-1714032:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1723064-1723177:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1733972-1734113:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1735750-1735962:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1737223-1737611:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1741759-1741992:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1745482-1745657:1:exon

ROBO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ROBO4
product: roundabout guidance receptor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_034754713.1
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: join(1674905..1675416,1690383..1690706,1695926..1696083,1696616..1696736,1700164..1700302,1700861..1700988,1703033..1703157,1705722..1705941,1707033..1707154,1708381..1708552,1709550..1709744,1710378..1710420,1711466..1711611,1713694..1714032,1723064..1723177,1733972..1734113,1735750..1735962,1737223..1737611,1741759..1741992,1745482..1746534)
location: region:1674905-1746534:1
so has part: feature:1674905-1675416:1:exon
so has part: feature:1690383-1690706:1:exon
so has part: feature:1695926-1696083:1:exon
so has part: feature:1696616-1696736:1:exon
so has part: feature:1700164-1700302:1:exon
so has part: feature:1700861-1700988:1:exon
so has part: feature:1703033-1703157:1:exon
so has part: feature:1705722-1705941:1:exon
so has part: feature:1707033-1707154:1:exon
so has part: feature:1708381-1708552:1:exon
so has part: feature:1709550-1709744:1:exon
so has part: feature:1710378-1710420:1:exon
so has part: feature:1711466-1711611:1:exon
so has part: feature:1713694-1714032:1:exon
so has part: feature:1723064-1723177:1:exon
so has part: feature:1733972-1734113:1:exon
so has part: feature:1735750-1735962:1:exon
so has part: feature:1737223-1737611:1:exon
so has part: feature:1741759-1741992:1:exon
so has part: feature:1745482-1746534:1:exon

position:1674905:1
position: 1674905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1674905-1675416:1:exon

position:1675416:1
position: 1675416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1690383-1690706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695926-1696083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1696616-1696736:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1700164-1700302:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1700861-1700988:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1703033-1703157:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1705722-1705941:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1707033-1707154:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1708381-1708552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1709550-1709744:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1710378-1710420:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1711466-1711611:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1713694-1714032:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1723064-1723177:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1733972-1734113:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1735750-1735962:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1737223-1737611:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1741759-1741992:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1745482-1746534:1:exon

ROBO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ROBO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 4 isoform X1
translation: MAAPRIALQRLLLGAALLQLEGSKSHSEEFPPYIIDHPTDLVVRWDQPATLNCRVAGSPAPTIEWYRNGEYVETSKDNVYSQRTLLPDGSLFFLRLNQRKGQSDEGVYTCVAMNHLGTASSKNASLYIAALREDFRLQPSNLLVTVGEQVLLECAPPRGHPEPTISWKKDGVPISQKAGHYEVSSGKLLMVHAQRSDAGLYVCVASNQAGQRESKAALVSVLEKPTFTRRPNDIVAKFGSTVQLGCGVEGDPLPKVWWHKEHGELPWGRHEVDEENTLRIHYVTTFDSGRYICTAQNQVGTASAKASLTVQDPLDTGQREWPKDVPREMMDVQLYLDNSTALPSSPAVYLHWKVIRPSQHTEGHAVLYRSLLPVSTDWVEWKVPREHGIVIPALKRGYKYEFKVRPYAGKVYGPDSNVRHLWIPEEVPSAAPQHVTITAVEDGNGTALISWDPPPHHAHNGIIRGYKVWYLGNETHHRSNRTVDGGTHSLETVLLPAGVKYCIQVAAFNGAGLGVPSNATCSSVEPLVGQTARTPAVLSVSHILAVIRQPVFIASVGSLLWLVLMVLAVYLCQHHARHYSREQQHALGKGLCRYSSEDTIVKHAMDVSDSPWLADRWKATSCSKTFSSSNSSRSSSQLLWAETKDSLDFHRSTVSFDRPSQSSQIPAVPRGPDSSSLYRVLYVDLPAKDMQTFHRPPLPSTPGPHRRAAEPGGPTDPRLGPRYRQSLGVESSCARGAEKRGLWKPAGPGPPSLTLQGPLESSSKRELQQAHSTPVLSPSLPAYSTSPSRAPSTSSSGKRHAGKGEETKVLKTFSSPKLLQSRGSLHGTGTLPPPPAPPTPHGPQGQGMQPESRDGGEAARPFPAGELQPSTKDALRSVLPSPSLPYRAASPAPSLGDDGEAVLTPDQVAAYLELSAEAECQRHRQESTFSPPHTYGYICGPLRSELGAGPAPEEDDDPDAEGSGCQSMPFLHRYCRRPSSSRSEAEGSLGGSLLNGWGSVSEENFTSTRCSLVSSSDGSFLVDANFAQALAVAVDSFCFGLSPSEAEQAYPDFSPPASPLDGLLPRPERWEGVAWAGAEPLPLPTWEWSTGWLEDMEAKYSQRPEGTPAAEKPEGKAALNGTRPLAGPNGACMAESSSPTAGTMGECQPPCPAAHSPMPNSSAIPRRGEKTRVVLQSLDAGATGVQA
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: join(1675353..1675416,1690383..1690706,1695926..1696083,1696616..1696736,1700164..1700302,1700861..1700988,1703033..1703157,1705722..1705941,1707033..1707154,1708381..1708552,1709550..1709744,1710378..1710420,1711466..1711611,1713694..1714032,1723064..1723177,1733972..1734113,1735750..1735962,1737223..1737611,1741759..1741992,1745482..1745657)
location: region:1675353-1745657:1
so has part: feature:1675353-1675416:1:exon
so has part: feature:1690383-1690706:1:exon
so has part: feature:1695926-1696083:1:exon
so has part: feature:1696616-1696736:1:exon
so has part: feature:1700164-1700302:1:exon
so has part: feature:1700861-1700988:1:exon
so has part: feature:1703033-1703157:1:exon
so has part: feature:1705722-1705941:1:exon
so has part: feature:1707033-1707154:1:exon
so has part: feature:1708381-1708552:1:exon
so has part: feature:1709550-1709744:1:exon
so has part: feature:1710378-1710420:1:exon
so has part: feature:1711466-1711611:1:exon
so has part: feature:1713694-1714032:1:exon
so has part: feature:1723064-1723177:1:exon
so has part: feature:1733972-1734113:1:exon
so has part: feature:1735750-1735962:1:exon
so has part: feature:1737223-1737611:1:exon
so has part: feature:1741759-1741992:1:exon
so has part: feature:1745482-1745657:1:exon

XP_034610604.1
type: Protein
SIO_000068: ncbiprotein

position:1675353:1
position: 1675353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675353-1675416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1690383-1690706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695926-1696083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1696616-1696736:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1700164-1700302:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1700861-1700988:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1703033-1703157:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1705722-1705941:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1707033-1707154:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1708381-1708552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1709550-1709744:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1710378-1710420:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1711466-1711611:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1713694-1714032:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1723064-1723177:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1733972-1734113:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1735750-1735962:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1737223-1737611:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1741759-1741992:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1745482-1745657:1:exon

ROBO3
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: ROBO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1776111..1885143)
location: region:1776111-1885143:-1
so has part: feature:1776111-1885143:-1:exon
subclass of: SO_0000010

117868694
type: Gene
SIO_000068: ncbigene

position:1776111:-1
position: 1776111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1885143:-1
position: 1885143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1776111-1885143:-1:exon

ROBO3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ROBO3
product: roundabout guidance receptor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034754890.1
SIO_010081: ROBO3
subclass of: SO_0000673
so part of: ROBO3
location: complement(join(1776111..1776568,1777184..1777338,1777990..1778166,1778375..1778482,1778789..1778970,1782189..1782416,1783804..1783963,1784362..1784637,1785019..1785173,1785296..1785338,1785833..1785856,1788952..1789146,1789658..1789829,1790040..1790158,1790835..1791051,1791407..1791528,1792268..1792434,1793050..1793218,1795026..1795107,1800296..1800501,1812398..1812569,1815394..1815518,1823954..1823965,1824594..1824721,1825415..1825553,1827882..1828002,1828545..1828702,1884615..1885143))
location: region:1776111-1885143:-1
so has part: feature:1884615-1885143:-1:exon
so has part: feature:1828545-1828702:-1:exon
so has part: feature:1827882-1828002:-1:exon
so has part: feature:1825415-1825553:-1:exon
so has part: feature:1824594-1824721:-1:exon
so has part: feature:1823954-1823965:-1:exon
so has part: feature:1815394-1815518:-1:exon
so has part: feature:1812398-1812569:-1:exon
so has part: feature:1800296-1800501:-1:exon
so has part: feature:1795026-1795107:-1:exon
so has part: feature:1793050-1793218:-1:exon
so has part: feature:1792268-1792434:-1:exon
so has part: feature:1791407-1791528:-1:exon
so has part: feature:1790835-1791051:-1:exon
so has part: feature:1790040-1790158:-1:exon
so has part: feature:1789658-1789829:-1:exon
so has part: feature:1788952-1789146:-1:exon
so has part: feature:1785833-1785856:-1:exon
so has part: feature:1785296-1785338:-1:exon
so has part: feature:1785019-1785173:-1:exon
so has part: feature:1784362-1784637:-1:exon
so has part: feature:1783804-1783963:-1:exon
so has part: feature:1782189-1782416:-1:exon
so has part: feature:1778789-1778970:-1:exon
so has part: feature:1778375-1778482:-1:exon
so has part: feature:1777990-1778166:-1:exon
so has part: feature:1777184-1777338:-1:exon
so has part: feature:1776111-1776568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1884615-1885143:-1:exon

position:1884615:-1
position: 1884615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1828545-1828702:-1:exon

position:1828545:-1
position: 1828545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1828702:-1
position: 1828702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1827882-1828002:-1:exon

position:1827882:-1
position: 1827882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1828002:-1
position: 1828002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1825415-1825553:-1:exon

position:1825415:-1
position: 1825415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1825553:-1
position: 1825553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1824594-1824721:-1:exon

position:1824594:-1
position: 1824594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1824721:-1
position: 1824721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1823954-1823965:-1:exon

position:1823954:-1
position: 1823954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1823965:-1
position: 1823965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1815394-1815518:-1:exon

position:1815394:-1
position: 1815394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1815518:-1
position: 1815518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1812398-1812569:-1:exon

position:1812398:-1
position: 1812398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1812569:-1
position: 1812569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1800296-1800501:-1:exon

position:1800296:-1
position: 1800296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1800501:-1
position: 1800501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1795026-1795107:-1:exon

position:1795026:-1
position: 1795026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1795107:-1
position: 1795107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1793050-1793218:-1:exon

position:1793050:-1
position: 1793050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1793218:-1
position: 1793218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1792268-1792434:-1:exon

position:1792268:-1
position: 1792268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1792434:-1
position: 1792434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1791407-1791528:-1:exon

position:1791407:-1
position: 1791407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1791528:-1
position: 1791528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1790835-1791051:-1:exon

position:1790835:-1
position: 1790835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1791051:-1
position: 1791051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1790040-1790158:-1:exon

position:1790040:-1
position: 1790040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1790158:-1
position: 1790158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1789658-1789829:-1:exon

position:1789658:-1
position: 1789658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1789829:-1
position: 1789829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1788952-1789146:-1:exon

position:1788952:-1
position: 1788952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1789146:-1
position: 1789146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1785833-1785856:-1:exon

position:1785833:-1
position: 1785833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1785856:-1
position: 1785856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1785296-1785338:-1:exon

position:1785296:-1
position: 1785296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1785338:-1
position: 1785338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1785019-1785173:-1:exon

position:1785019:-1
position: 1785019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1785173:-1
position: 1785173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1784362-1784637:-1:exon

position:1784362:-1
position: 1784362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1784637:-1
position: 1784637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1783804-1783963:-1:exon

position:1783804:-1
position: 1783804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1783963:-1
position: 1783963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1782189-1782416:-1:exon

position:1782189:-1
position: 1782189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1782416:-1
position: 1782416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1778789-1778970:-1:exon

position:1778789:-1
position: 1778789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1778970:-1
position: 1778970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1778375-1778482:-1:exon

position:1778375:-1
position: 1778375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1778482:-1
position: 1778482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1777990-1778166:-1:exon

position:1777990:-1
position: 1777990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1778166:-1
position: 1778166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1777184-1777338:-1:exon

position:1777184:-1
position: 1777184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1777338:-1
position: 1777338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1776111-1776568:-1:exon

position:1776568:-1
position: 1776568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ROBO3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ROBO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 3
translation: MGVPGGCFEVQSATSPTPAVRPHSPVSSGLLWAIVSIPSGVAVNPLGSSAFPSWSPRPDLCSLFCLSGSRPRLEDFSPRIVEHPSDLIVSKGEPATLNCKAEGRPTPIIEWYKDGERVETDKEDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGVYVCVARNYLGEAVSRNASLEVAILRDDFRQAPSDVVVAAGEPAVMECVPPRGHPEPTISWKKNSIRISDKDERITIRGGKLMMSNTRKSDAGMYVCVATNMVGERDSEPAELVVFERPTFIRRPINQVVLAEDSVDFHCEVQGDPVPTSRWRKEEGELPRGRAEIQNDNTLRISRVSAEDEGTYTCVAENSVGKSEASGSLSVHVSPFLPPQLVTRPRDQIVAQGRTVTFHCETKGNPPPAVFWQKEGSQILLFPSQPPQPMGRFSVSPSGEMTITEVQTADSGYYMCQAISVAGSILAKALLEVEDVTSDRIPPIIRRGPANQTLAADATAQLQCHVTGNPLPSIQWLKDGQQVVGRDPRVSLLDNGTLQITNVQVMDSGLYVCVATSSTGETTWSGALAVQETGADLQVQLSEPGHLPGPPSVPLVTDVTKNSVTLVWKPSPQRGGAATTTYIIEAFSQSAGSTWQTVADNVRVEKHTVNGLNPNTIYLFLIRAANAYGLSDPSPVSEPVRTQDVSPTRQGVDHRQVQRELGQVVVQLQEPVILTSTTIQVSWTVNRQAQFIQGYRVLYRPRGSAWLVQDVPAPPQRSAVLLELHKGQEYEIKLRPYFDEFQGLDSEVLVVRTPEEAPSAPPQAVSVVTVGNSTSISVSWEPPPAGEQNGIIQDYRIWCLGNESRFHINRSVEGTVHSTVLQGLVPGVLYRTEVAAVTSAGVGVRSAPVTIQIKPALDQGSVPISSGENVSLAEQITDVVKQPAFIAGIGGACWVILMCFSLWIYWRRKKRKELSHYTASFAYTPAVSFPHAEGPARGNSRPGMLAMATSASNYPWLADSWPAPNLLRNGNAKEPGTSCCTGIHDATERYYNEAGISNYLAQTEKFGAGASDGPIYSTIDPASDEMRTFNGAFSQHTTPYASTPLVPYGVPSLPSPDAEESPRSPQPGPSGSQYALPERSRAEQVAKIGKAKSMGKPVKTPSLNWTELLPPPPSASELSQYAEEEEEEEEEEEELAASVDTEEWCPPLPERTYLMENAQEEQCPLPPPHGDISSPAHSYGQQSTATLTPSPRDEMRAAEDIPRLHHFEIPHLPRRLPNGSGALPRAPSPPLTQSDPNLNALADGADGHTPRHGHRRNLSQTPAHSAENLSSPSPGKARPAPGDVSLPPAQKTRTKKKAKSSHYRREKKQGDLPPPPLPPPSEDPGASAQPPAPPPACRASSLERDVSSASVAERRAGHRTTPGQHQHRDAEEIVPYSRPTFLSRGQVSSNCSTTGSSSSRGSTGSRGHGSGRSRTAGDRSEEKR
SIO_010081: ROBO3
subclass of: SO_0000673
so part of: ROBO3
location: complement(join(1776557..1776568,1777184..1777338,1777990..1778166,1778375..1778482,1778789..1778970,1782189..1782416,1783804..1783963,1784362..1784637,1785019..1785173,1785296..1785338,1785833..1785856,1788952..1789146,1789658..1789829,1790040..1790158,1790835..1791051,1791407..1791528,1792268..1792434,1793050..1793218,1795026..1795107,1800296..1800501,1812398..1812569,1815394..1815518,1823954..1823965,1824594..1824721,1825415..1825553,1827882..1828002,1828545..1828702,1884615..1885143))
location: region:1776557-1885143:-1
so has part: feature:1884615-1885143:-1:exon
so has part: feature:1828545-1828702:-1:exon
so has part: feature:1827882-1828002:-1:exon
so has part: feature:1825415-1825553:-1:exon
so has part: feature:1824594-1824721:-1:exon
so has part: feature:1823954-1823965:-1:exon
so has part: feature:1815394-1815518:-1:exon
so has part: feature:1812398-1812569:-1:exon
so has part: feature:1800296-1800501:-1:exon
so has part: feature:1795026-1795107:-1:exon
so has part: feature:1793050-1793218:-1:exon
so has part: feature:1792268-1792434:-1:exon
so has part: feature:1791407-1791528:-1:exon
so has part: feature:1790835-1791051:-1:exon
so has part: feature:1790040-1790158:-1:exon
so has part: feature:1789658-1789829:-1:exon
so has part: feature:1788952-1789146:-1:exon
so has part: feature:1785833-1785856:-1:exon
so has part: feature:1785296-1785338:-1:exon
so has part: feature:1785019-1785173:-1:exon
so has part: feature:1784362-1784637:-1:exon
so has part: feature:1783804-1783963:-1:exon
so has part: feature:1782189-1782416:-1:exon
so has part: feature:1778789-1778970:-1:exon
so has part: feature:1778375-1778482:-1:exon
so has part: feature:1777990-1778166:-1:exon
so has part: feature:1777184-1777338:-1:exon
so has part: feature:1776557-1776568:-1:exon

XP_034610781.1
type: Protein
SIO_000068: ncbiprotein

position:1776557:-1
position: 1776557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1884615-1885143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1828545-1828702:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1827882-1828002:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825415-1825553:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1824594-1824721:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1823954-1823965:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1815394-1815518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1812398-1812569:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1800296-1800501:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1795026-1795107:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1793050-1793218:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1792268-1792434:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1791407-1791528:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1790835-1791051:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1790040-1790158:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1789658-1789829:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1788952-1789146:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1785833-1785856:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1785296-1785338:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1785019-1785173:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1784362-1784637:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1783804-1783963:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1782189-1782416:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1778789-1778970:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1778375-1778482:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1777990-1778166:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1777184-1777338:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1776557-1776568:-1:exon

MSANTD2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2160409..2194889
location: region:2160409-2194889:1
so has part: feature:2160409-2194889:1:exon
subclass of: SO_0000010

117868651
type: Gene
SIO_000068: ncbigene

position:2160409:1
position: 2160409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2194889:1
position: 2194889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2160409-2194889:1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_034754782.1
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(2160409..2160938,2176961..2177005,2177582..2177840,2179643..2179703,2193427..2194889)
location: region:2160409-2194889:1
so has part: feature:2160409-2160938:1:exon
so has part: feature:2176961-2177005:1:exon
so has part: feature:2177582-2177840:1:exon
so has part: feature:2179643-2179703:1:exon
so has part: feature:2193427-2194889:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2160409-2160938:1:exon

position:2160938:1
position: 2160938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2176961-2177005:1:exon

position:2176961:1
position: 2176961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2177005:1
position: 2177005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2177582-2177840:1:exon

position:2177582:1
position: 2177582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2177840:1
position: 2177840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2179643-2179703:1:exon

position:2179643:1
position: 2179643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2179703:1
position: 2179703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2193427-2194889:1:exon

position:2193427:1
position: 2193427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_034754783.1
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(2160409..2160938,2176964..2177005,2177582..2177840,2179643..2179703,2193427..2194889)
location: region:2160409-2194889:1
so has part: feature:2160409-2160938:1:exon
so has part: feature:2176964-2177005:1:exon
so has part: feature:2177582-2177840:1:exon
so has part: feature:2179643-2179703:1:exon
so has part: feature:2193427-2194889:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2160409-2160938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2176964-2177005:1:exon

position:2176964:1
position: 2176964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2177582-2177840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2179643-2179703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2193427-2194889:1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_034754784.1
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(2160409..2160938,2177582..2177840,2179643..2179703,2193427..2194889)
location: region:2160409-2194889:1
so has part: feature:2160409-2160938:1:exon
so has part: feature:2177582-2177840:1:exon
so has part: feature:2179643-2179703:1:exon
so has part: feature:2193427-2194889:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2160409-2160938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2177582-2177840:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2179643-2179703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2193427-2194889:1:exon

MSANTD2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 31138
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004643686.1
SIO_010081: MSANTD2
so part of: MSANTD2
location: join(2160409..2160938,2176961..2177005,2177582..2177840,2179643..2179703,2186324..2186457,2193427..2193514)
location: region:2160409-2193514:1
so has part: feature:2160409-2160938:1:exon
so has part: feature:2176961-2177005:1:exon
so has part: feature:2177582-2177840:1:exon
so has part: feature:2179643-2179703:1:exon
so has part: feature:2186324-2186457:1:exon
so has part: feature:2193427-2193514:1:exon

position:2193514:1
position: 2193514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2160409-2160938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2176961-2177005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2177582-2177840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2179643-2179703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2186324-2186457:1:exon

position:2186324:1
position: 2186324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2186457:1
position: 2186457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2193427-2193514:1:exon

MSANTD2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 31138
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004643687.1
SIO_010081: MSANTD2
so part of: MSANTD2
location: join(2160409..2160938,2176961..2177005,2177582..2177840,2179643..2179703,2186327..2186457,2193427..2193514)
location: region:2160409-2193514:1
so has part: feature:2160409-2160938:1:exon
so has part: feature:2176961-2177005:1:exon
so has part: feature:2177582-2177840:1:exon
so has part: feature:2179643-2179703:1:exon
so has part: feature:2186327-2186457:1:exon
so has part: feature:2193427-2193514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2160409-2160938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2176961-2177005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2177582-2177840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2179643-2179703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2186327-2186457:1:exon

position:2186327:1
position: 2186327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2193427-2193514:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X1
translation: MAAPCGSSQLPAAESPLKIPKMEVLSPGSPGALSDGNPSLSDPSTPSGASPLGPGGPGSAAAAGAGAGGGGAGGRGGASPSVSFSPGGAAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPSQCRERIKQLPKRQSELVRNAKYTLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQDLHCYQGGDPELDEMPATKRTLKIKQESSEEAQKQDVMQNIVQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRIIMTRVQKMNWKNVYYKFLEITISEARCLELHMEVDWIPIAHSKPTGGNVVQYLLPGGIPKSPGLYAIGYEDCQEKPHSPHADRRGPDPGKEIQGEVDVPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINGFLSQNCIVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(2160432..2160938,2176961..2177005,2177582..2177840,2179643..2179703,2193427..2194279)
location: region:2160432-2194279:1
so has part: feature:2160432-2160938:1:exon
so has part: feature:2176961-2177005:1:exon
so has part: feature:2177582-2177840:1:exon
so has part: feature:2179643-2179703:1:exon
so has part: feature:2193427-2194279:1:exon

XP_034610673.1
type: Protein
SIO_000068: ncbiprotein

position:2160432:1
position: 2160432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2194279:1
position: 2194279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2160432-2160938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2176961-2177005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2177582-2177840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2179643-2179703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2193427-2194279:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X2
translation: MAAPCGSSQLPAAESPLKIPKMEVLSPGSPGALSDGNPSLSDPSTPSGASPLGPGGPGSAAAAGAGAGGGGAGGRGGASPSVSFSPGGAAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPSQCRERIKLPKRQSELVRNAKYTLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQDLHCYQGGDPELDEMPATKRTLKIKQESSEEAQKQDVMQNIVQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRIIMTRVQKMNWKNVYYKFLEITISEARCLELHMEVDWIPIAHSKPTGGNVVQYLLPGGIPKSPGLYAIGYEDCQEKPHSPHADRRGPDPGKEIQGEVDVPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINGFLSQNCIVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(2160432..2160938,2176964..2177005,2177582..2177840,2179643..2179703,2193427..2194279)
location: region:2160432-2194279:1
so has part: feature:2160432-2160938:1:exon
so has part: feature:2176964-2177005:1:exon
so has part: feature:2177582-2177840:1:exon
so has part: feature:2179643-2179703:1:exon
so has part: feature:2193427-2194279:1:exon

XP_034610674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2160432-2160938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2176964-2177005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2177582-2177840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2179643-2179703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2193427-2194279:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2 isoform X3
translation: MAAPCGSSQLPAAESPLKIPKMEVLSPGSPGALSDGNPSLSDPSTPSGASPLGPGGPGSAAAAGAGAGGGGAGGRGGASPSVSFSPGGAAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPSQCRERIKTLRRCYSRVKEHGVGKRKSSYTFEQLEQVFGQGGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQDLHCYQGGDPELDEMPATKRTLKIKQESSEEAQKQDVMQNIVQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRIIMTRVQKMNWKNVYYKFLEITISEARCLELHMEVDWIPIAHSKPTGGNVVQYLLPGGIPKSPGLYAIGYEDCQEKPHSPHADRRGPDPGKEIQGEVDVPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINGFLSQNCIVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(2160432..2160938,2177582..2177840,2179643..2179703,2193427..2194279)
location: region:2160432-2194279:1
so has part: feature:2160432-2160938:1:exon
so has part: feature:2177582-2177840:1:exon
so has part: feature:2179643-2179703:1:exon
so has part: feature:2193427-2194279:1:exon

XP_034610675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2160432-2160938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2177582-2177840:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2179643-2179703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2193427-2194279:1:exon

ESAM
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: ESAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2211229..2302937
location: region:2211229-2302937:1
so has part: feature:2211229-2302937:1:exon
subclass of: SO_0000010

117868557
type: Gene
SIO_000068: ncbigene

position:2211229:1
position: 2211229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2302937:1
position: 2302937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2211229-2302937:1:exon

ESAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ESAM
product: endothelial cell adhesion molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_034754615.1
SIO_010081: ESAM
subclass of: SO_0000673
so part of: ESAM
location: join(2211229..2211377,2281877..2282034,2286486..2286699,2288771..2288926,2295032..2295154,2296760..2296898,2300299..2302937)
location: region:2211229-2302937:1
so has part: feature:2211229-2211377:1:exon
so has part: feature:2281877-2282034:1:exon
so has part: feature:2286486-2286699:1:exon
so has part: feature:2288771-2288926:1:exon
so has part: feature:2295032-2295154:1:exon
so has part: feature:2296760-2296898:1:exon
so has part: feature:2300299-2302937:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2211229-2211377:1:exon

position:2211377:1
position: 2211377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2281877-2282034:1:exon

position:2281877:1
position: 2281877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2282034:1
position: 2282034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2286486-2286699:1:exon

position:2286486:1
position: 2286486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2286699:1
position: 2286699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2288771-2288926:1:exon

position:2288771:1
position: 2288771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2288926:1
position: 2288926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2295032-2295154:1:exon

position:2295032:1
position: 2295032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2295154:1
position: 2295154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2296760-2296898:1:exon

position:2296760:1
position: 2296760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2296898:1
position: 2296898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2300299-2302937:1:exon

position:2300299:1
position: 2300299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ESAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ESAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial cell-selective adhesion molecule
translation: MSAAPQPPVLGAGGMEPLPLALGLAALLGLSSALLEVNVGQASISTIQGQRVVLPIWYTSVSQSRPYVSWVLERPGANRLQILTYMDGTVKVQETYLKNRTGFVYPMPFFNISIAINNTQEMDSGEYMCTVNIVDDDTINGKNIGLINLTVLVPPSPPTCQIHGKPYLGGNVTMSCKSSFSKPSPKYSWQRTAPNTQVFFAPAQDLARGTLMLTNLSKEMSGTYVCTAANVAGSSKCNITLEVNSSLSAAVIAGAVVGSLIGVGLIILFVLQMFVYRKKKKDTQEELANEIKEDAVAPKTPSWGKSSGSDIVSKNGTLSSVHTTRDHKLYPSKPASDTASIITAAGSTVGYRPPHSHPRSRTLTPTPSLSSQSLPLYFPPGMNGGHYPSTVPSNRSALHRTNGAQPQAPRQEPTVPQGLTTSTLTRMGAVPVMVPAQSQAGSLV
SIO_010081: ESAM
subclass of: SO_0000673
so part of: ESAM
location: join(2211293..2211377,2281877..2282034,2286486..2286699,2288771..2288926,2295032..2295154,2296760..2296898,2300299..2300758)
location: region:2211293-2300758:1
so has part: feature:2211293-2211377:1:exon
so has part: feature:2281877-2282034:1:exon
so has part: feature:2286486-2286699:1:exon
so has part: feature:2288771-2288926:1:exon
so has part: feature:2295032-2295154:1:exon
so has part: feature:2296760-2296898:1:exon
so has part: feature:2300299-2300758:1:exon

XP_034610506.1
type: Protein
SIO_000068: ncbiprotein

position:2211293:1
position: 2211293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2300758:1
position: 2300758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2211293-2211377:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2281877-2282034:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2286486-2286699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2288771-2288926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2295032-2295154:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2296760-2296898:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2300299-2300758:1:exon

SPA17
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SPA17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2401915..2409232)
location: region:2401915-2409232:-1
so has part: feature:2401915-2409232:-1:exon
subclass of: SO_0000010

117868665
type: Gene
SIO_000068: ncbigene

position:2401915:-1
position: 2401915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2409232:-1
position: 2409232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2401915-2409232:-1:exon

SPA17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SPA17
product: sperm autoantigenic protein 17, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_034754801.1
SIO_010081: SPA17
subclass of: SO_0000673
so part of: SPA17
location: complement(join(2401915..2402187,2403357..2403416,2406236..2406306,2407680..2407860,2409080..2409232))
location: region:2401915-2409232:-1
so has part: feature:2409080-2409232:-1:exon
so has part: feature:2407680-2407860:-1:exon
so has part: feature:2406236-2406306:-1:exon
so has part: feature:2403357-2403416:-1:exon
so has part: feature:2401915-2402187:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2409080-2409232:-1:exon

position:2409080:-1
position: 2409080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2407680-2407860:-1:exon

position:2407680:-1
position: 2407680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2407860:-1
position: 2407860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2406236-2406306:-1:exon

position:2406236:-1
position: 2406236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2406306:-1
position: 2406306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2403357-2403416:-1:exon

position:2403357:-1
position: 2403357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2403416:-1
position: 2403416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2401915-2402187:-1:exon

position:2402187:-1
position: 2402187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPA17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SPA17
product: sperm autoantigenic protein 17, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_034754802.1
SIO_010081: SPA17
subclass of: SO_0000673
so part of: SPA17
location: complement(join(2401915..2402187,2403357..2403416,2406236..2406306,2407680..2407860,2408978..2409115))
location: region:2401915-2409115:-1
so has part: feature:2408978-2409115:-1:exon
so has part: feature:2407680-2407860:-1:exon
so has part: feature:2406236-2406306:-1:exon
so has part: feature:2403357-2403416:-1:exon
so has part: feature:2401915-2402187:-1:exon

position:2409115:-1
position: 2409115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2408978-2409115:-1:exon

position:2408978:-1
position: 2408978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2407680-2407860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2406236-2406306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2403357-2403416:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2401915-2402187:-1:exon

SPA17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SPA17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm surface protein Sp17
translation: MSIPFSNTHHRIPPGFANLLEGLAREVLREQPEDIPAFAANYFEELLDRREKTKFDPAEWGAKLDDRFYNNKAFEEAVSLQEEVKESMKDSSLEPELDKHSLYETATHEIEDKAATKIQAVYRGYRVRETVRRLKELGQDATNPTEEI
SIO_010081: SPA17
subclass of: SO_0000673
so part of: SPA17
location: complement(join(2402026..2402187,2403357..2403416,2406236..2406306,2407680..2407833))
location: region:2402026-2407833:-1
so has part: feature:2407680-2407833:-1:exon
so has part: feature:2406236-2406306:-1:exon
so has part: feature:2403357-2403416:-1:exon
so has part: feature:2402026-2402187:-1:exon

XP_034610692.1
type: Protein
SIO_000068: ncbiprotein

position:2402026:-1
position: 2402026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2407833:-1
position: 2407833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2407680-2407833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2406236-2406306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2403357-2403416:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2402026-2402187:-1:exon

SPA17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SPA17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm surface protein Sp17
translation: MSIPFSNTHHRIPPGFANLLEGLAREVLREQPEDIPAFAANYFEELLDRREKTKFDPAEWGAKLDDRFYNNKAFEEAVSLQEEVKESMKDSSLEPELDKHSLYETATHEIEDKAATKIQAVYRGYRVRETVRRLKELGQDATNPTEEI
SIO_010081: SPA17
subclass of: SO_0000673
so part of: SPA17
location: complement(join(2402026..2402187,2403357..2403416,2406236..2406306,2407680..2407833))
location: region:2402026-2407833:-1
so has part: feature:2407680-2407833:-1:exon
so has part: feature:2406236-2406306:-1:exon
so has part: feature:2403357-2403416:-1:exon
so has part: feature:2402026-2402187:-1:exon

XP_034610693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2407680-2407833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2406236-2406306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2403357-2403416:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2402026-2402187:-1:exon

SIAE
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SIAE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2410423..2433522
location: region:2410423-2433522:1
so has part: feature:2410423-2433522:1:exon
subclass of: SO_0000010

117868664
type: Gene
SIO_000068: ncbigene

position:2410423:1
position: 2410423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2433522:1
position: 2433522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2410423-2433522:1:exon

SIAE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SIAE
product: sialic acid acetylesterase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034754800.1
SIO_010081: SIAE
subclass of: SO_0000673
so part of: SIAE
location: join(2410423..2410486,2417836..2417997,2425440..2425615,2426007..2426145,2427413..2427596,2429410..2429519,2429605..2429738,2431159..2431313,2432262..2432457,2432954..2433522)
location: region:2410423-2433522:1
so has part: feature:2410423-2410486:1:exon
so has part: feature:2417836-2417997:1:exon
so has part: feature:2425440-2425615:1:exon
so has part: feature:2426007-2426145:1:exon
so has part: feature:2427413-2427596:1:exon
so has part: feature:2429410-2429519:1:exon
so has part: feature:2429605-2429738:1:exon
so has part: feature:2431159-2431313:1:exon
so has part: feature:2432262-2432457:1:exon
so has part: feature:2432954-2433522:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2410423-2410486:1:exon

position:2410486:1
position: 2410486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2417836-2417997:1:exon

position:2417836:1
position: 2417836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2417997:1
position: 2417997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2425440-2425615:1:exon

position:2425440:1
position: 2425440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2425615:1
position: 2425615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2426007-2426145:1:exon

position:2426007:1
position: 2426007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2426145:1
position: 2426145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2427413-2427596:1:exon

position:2427413:1
position: 2427413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2427596:1
position: 2427596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2429410-2429519:1:exon

position:2429410:1
position: 2429410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2429519:1
position: 2429519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2429605-2429738:1:exon

position:2429605:1
position: 2429605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2429738:1
position: 2429738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2431159-2431313:1:exon

position:2431159:1
position: 2431159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2431313:1
position: 2431313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2432262-2432457:1:exon

position:2432262:1
position: 2432262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2432457:1
position: 2432457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2432954-2433522:1:exon

position:2432954:1
position: 2432954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIAE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SIAE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sialate O-acetylesterase
translation: MAACLLLVLTLASAEGVTFRFASYYGDHMVLQKKPAGAVVWGYGEADANVTVSLSKDSKVIMKKMAQVEEHSGTWKVVLAPTDHGGPYSVMAEQHSREEPKNLTLWDIYFGDVWLCSGQSNMEMTVSQIINASKELSEAPLYPYVRVFTASLIQSEVELQDLAKIDLEWSIPTAENLGHGNFSYFSAVCWLFGRHLYETLRYPIGLVESSWGGSCIESWSSGRVLQECGLTGEASRFLLPTLLSGPKMPSVLWNAMIHPLLNMSLTGVIWYQGEANALVNTDLYNCTFPALIADWRRTFHAGSEGQTQPLFPFGFVQLSTFRRQDQDDSFPRIRWHQTADYGYAPNKRMPNTFMAVAVDLCDEHSPYSSIHPRDKQNVAYRLHLGARAVAYGEKGLVFQGPYPTKVVVDGARGLINVTYGQELLLLLMHDRIFEVCCSDQPQLSAQEPCQWVPAPMVSASSHTVTLSSPGCRTAVTRLRYAWTEWPCEYRQCPLYNKHLLPAPPFVIDSALRTGWANC
SIO_010081: SIAE
subclass of: SO_0000673
so part of: SIAE
location: join(2410441..2410486,2417836..2417997,2425440..2425615,2426007..2426145,2427413..2427596,2429410..2429519,2429605..2429738,2431159..2431313,2432262..2432457,2432954..2433208)
location: region:2410441-2433208:1
so has part: feature:2410441-2410486:1:exon
so has part: feature:2417836-2417997:1:exon
so has part: feature:2425440-2425615:1:exon
so has part: feature:2426007-2426145:1:exon
so has part: feature:2427413-2427596:1:exon
so has part: feature:2429410-2429519:1:exon
so has part: feature:2429605-2429738:1:exon
so has part: feature:2431159-2431313:1:exon
so has part: feature:2432262-2432457:1:exon
so has part: feature:2432954-2433208:1:exon

XP_034610691.1
type: Protein
SIO_000068: ncbiprotein

position:2410441:1
position: 2410441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2433208:1
position: 2433208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2410441-2410486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2417836-2417997:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2425440-2425615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2426007-2426145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2427413-2427596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2429410-2429519:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2429605-2429738:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2431159-2431313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2432262-2432457:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2432954-2433208:1:exon

PANX3
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: PANX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2438818..2455974)
location: region:2438818-2455974:-1
so has part: feature:2438818-2455974:-1:exon
subclass of: SO_0000010

117868690
type: Gene
SIO_000068: ncbigene

position:2438818:-1
position: 2438818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2455974:-1
position: 2455974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2438818-2455974:-1:exon

PANX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PANX3
product: pannexin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034754888.1
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: complement(join(2438818..2439611,2443618..2444282,2446530..2446744,2449295..2449437,2454931..2455974))
location: region:2438818-2455974:-1
so has part: feature:2454931-2455974:-1:exon
so has part: feature:2449295-2449437:-1:exon
so has part: feature:2446530-2446744:-1:exon
so has part: feature:2443618-2444282:-1:exon
so has part: feature:2438818-2439611:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2454931-2455974:-1:exon

position:2454931:-1
position: 2454931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2449295-2449437:-1:exon

position:2449295:-1
position: 2449295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2449437:-1
position: 2449437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2446530-2446744:-1:exon

position:2446530:-1
position: 2446530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2446744:-1
position: 2446744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2443618-2444282:-1:exon

position:2443618:-1
position: 2443618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2444282:-1
position: 2444282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2438818-2439611:-1:exon

position:2439611:-1
position: 2439611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PANX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PANX3
product: pannexin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034754887.1
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: complement(join(2438818..2439611,2443618..2444282,2446530..2446744,2449295..2449839))
location: region:2438818-2449839:-1
so has part: feature:2449295-2449839:-1:exon
so has part: feature:2446530-2446744:-1:exon
so has part: feature:2443618-2444282:-1:exon
so has part: feature:2438818-2439611:-1:exon

position:2449839:-1
position: 2449839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2449295-2449839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2446530-2446744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2443618-2444282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2438818-2439611:-1:exon

PANX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PANX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pannexin-3 isoform X2
translation: MSIAHTAAEYMLSDALLPEPSGSRAKGLRLELPSDRVVKFVTVGLPLVLVSLAFAREFSTGTQISCFSPANFTGKQSAYVDTSCWDSLIHYEFDAAGNTTAKSLWTLKAFPYSLLLIAVAMYLPSLLWRYTAAPALNSDLLFIIDELDKSYNRSIRLVQHMVKVHQASTDARLFWEEFEKARRERYFEFPLLERYLACKQRSHSLVGAYLLRNLLLLLLITATCFYLGFLHLHVFFQDEFSCSIKTGLLRDEPQVPDVIPCKLVFFSVFQLISLSNGGVYVLLAPVVIYNMLQLLQWDKRLLSIYEMLPAFDLLSRKMLTCPLNDLNILLLFLQANISELKSFSRLNAVCALREVTSSPQHIDTVVDFMTLLAGLETSKPKHPACAAGAEGNTPPPSSEILEMKPTGEAKRNADPKPSPPGSA
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: complement(join(2439544..2439611,2443618..2444282,2446530..2446744,2449295..2449437,2454931..2455111))
location: region:2439544-2455111:-1
so has part: feature:2454931-2455111:-1:exon
so has part: feature:2449295-2449437:-1:exon
so has part: feature:2446530-2446744:-1:exon
so has part: feature:2443618-2444282:-1:exon
so has part: feature:2439544-2439611:-1:exon

XP_034610779.1
type: Protein
SIO_000068: ncbiprotein

position:2439544:-1
position: 2439544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2455111:-1
position: 2455111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2454931-2455111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2449295-2449437:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2446530-2446744:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2443618-2444282:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2439544-2439611:-1:exon

PANX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PANX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pannexin-3 isoform X1
translation: MQSQAVLTARHCWLLRAHKGVLSTLHSRLASGWEGSGLERGCWTHIHRRDSRAAGFRVSGDGGGWNPHLWVQQLLPAPCCNHSCSVPGTQISCFSPANFTGKQSAYVDTSCWDSLIHYEFDAAGNTTAKSLWTLKAFPYSLLLIAVAMYLPSLLWRYTAAPALNSDLLFIIDELDKSYNRSIRLVQHMVKVHQASTDARLFWEEFEKARRERYFEFPLLERYLACKQRSHSLVGAYLLRNLLLLLLITATCFYLGFLHLHVFFQDEFSCSIKTGLLRDEPQVPDVIPCKLVFFSVFQLISLSNGGVYVLLAPVVIYNMLQLLQWDKRLLSIYEMLPAFDLLSRKMLTCPLNDLNILLLFLQANISELKSFSRLNAVCALREVTSSPQHIDTVVDFMTLLAGLETSKPKHPACAAGAEGNTPPPSSEILEMKPTGEAKRNADPKPSPPGSA
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: complement(join(2439544..2439611,2443618..2444282,2446530..2446744,2449295..2449699))
location: region:2439544-2449699:-1
so has part: feature:2449295-2449699:-1:exon
so has part: feature:2446530-2446744:-1:exon
so has part: feature:2443618-2444282:-1:exon
so has part: feature:2439544-2439611:-1:exon

XP_034610778.1
type: Protein
SIO_000068: ncbiprotein

position:2449699:-1
position: 2449699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2449295-2449699:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2446530-2446744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2443618-2444282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2439544-2439611:-1:exon

RPUSD4
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: RPUSD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2459781..2468102)
location: region:2459781-2468102:-1
so has part: feature:2459781-2468102:-1:exon
subclass of: SO_0000010

117868631
type: Gene
SIO_000068: ncbigene

position:2459781:-1
position: 2459781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2468102:-1
position: 2468102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2459781-2468102:-1:exon

RPUSD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: RPUSD4
product: RNA pseudouridine synthase D4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_034754756.1
SIO_010081: RPUSD4
subclass of: SO_0000673
so part of: RPUSD4
location: complement(join(2459781..2460379,2461374..2461471,2461913..2462063,2462224..2462317,2463171..2463372,2464500..2464665,2467900..2468102))
location: region:2459781-2468102:-1
so has part: feature:2467900-2468102:-1:exon
so has part: feature:2464500-2464665:-1:exon
so has part: feature:2463171-2463372:-1:exon
so has part: feature:2462224-2462317:-1:exon
so has part: feature:2461913-2462063:-1:exon
so has part: feature:2461374-2461471:-1:exon
so has part: feature:2459781-2460379:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2467900-2468102:-1:exon

position:2467900:-1
position: 2467900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2464500-2464665:-1:exon

position:2464500:-1
position: 2464500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2464665:-1
position: 2464665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2463171-2463372:-1:exon

position:2463171:-1
position: 2463171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2463372:-1
position: 2463372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2462224-2462317:-1:exon

position:2462224:-1
position: 2462224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2462317:-1
position: 2462317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2461913-2462063:-1:exon

position:2461913:-1
position: 2461913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2462063:-1
position: 2462063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2461374-2461471:-1:exon

position:2461374:-1
position: 2461374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2461471:-1
position: 2461471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2459781-2460379:-1:exon

position:2460379:-1
position: 2460379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPUSD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: RPUSD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial RNA pseudouridine synthase RPUSD4
translation: MAVLGSVGLRLWGPAPALSQSLRAFSTTPGAAAAASAEQLAEKLRAQKREEQKPEEPKNPVLRRVRELSQLSKQLQRVHPNVLAKALKRRILYQNEELVVIDKPYGLPVHGGPGIQNCITDVLPILAKMLDGMKAEPLHLCHRLDKETTGVMVLAWDKDTAHRIQCLFKTRQVEKKYWTISVGLPVPSEGLVDIPIVEKQVQSQQSHYKMTLAPNYRVSPENGKMVKVRRNRDAHSAVTRYRVLASSPSCSLLELQPITGVKHQLRVHLAYGLGCPILGDHKYAHWNKLAPQKLPENALMRLGLEQAKVRHLPLHLHAHQLTLPTGTSGDKQLHLVCRPPHFFTNALKRLKLEIPESLEK
SIO_010081: RPUSD4
subclass of: SO_0000673
so part of: RPUSD4
location: complement(join(2460173..2460379,2461374..2461471,2461913..2462063,2462224..2462317,2463171..2463372,2464500..2464665,2467900..2468064))
location: region:2460173-2468064:-1
so has part: feature:2467900-2468064:-1:exon
so has part: feature:2464500-2464665:-1:exon
so has part: feature:2463171-2463372:-1:exon
so has part: feature:2462224-2462317:-1:exon
so has part: feature:2461913-2462063:-1:exon
so has part: feature:2461374-2461471:-1:exon
so has part: feature:2460173-2460379:-1:exon

XP_034610647.1
type: Protein
SIO_000068: ncbiprotein

position:2460173:-1
position: 2460173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2468064:-1
position: 2468064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2467900-2468064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2464500-2464665:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2463171-2463372:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2462224-2462317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2461913-2462063:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2461374-2461471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2460173-2460379:-1:exon

HYLS1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: HYLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2468440..2478873
location: region:2468440-2478873:1
so has part: feature:2468440-2478873:1:exon
subclass of: SO_0000010

117868591
type: Gene
SIO_000068: ncbigene

position:2468440:1
position: 2468440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2478873:1
position: 2478873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2468440-2478873:1:exon

HYLS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: HYLS1
product: HYLS1 centriolar and ciliogenesis associated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034754678.1
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: join(2468440..2468549,2469179..2469346,2477416..2478873)
location: region:2468440-2478873:1
so has part: feature:2468440-2468549:1:exon
so has part: feature:2469179-2469346:1:exon
so has part: feature:2477416-2478873:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2468440-2468549:1:exon

position:2468549:1
position: 2468549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2469179-2469346:1:exon

position:2469179:1
position: 2469179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2469346:1
position: 2469346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2477416-2478873:1:exon

position:2477416:1
position: 2477416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HYLS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: HYLS1
product: HYLS1 centriolar and ciliogenesis associated, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034754680.1
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: join(2468440..2468549,2469179..2469330,2477416..2478873)
location: region:2468440-2478873:1
so has part: feature:2468440-2468549:1:exon
so has part: feature:2469179-2469330:1:exon
so has part: feature:2477416-2478873:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2468440-2468549:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2469179-2469330:1:exon

position:2469330:1
position: 2469330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2477416-2478873:1:exon

HYLS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: HYLS1
product: HYLS1 centriolar and ciliogenesis associated, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_034754679.1
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: join(2468440..2468549,2477416..2478873)
location: region:2468440-2478873:1
so has part: feature:2468440-2468549:1:exon
so has part: feature:2477416-2478873:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2468440-2468549:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2477416-2478873:1:exon

PUS3
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: PUS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2471154..2479985)
location: region:2471154-2479985:-1
so has part: feature:2471154-2479985:-1:exon
subclass of: SO_0000010

117868590
type: Gene
SIO_000068: ncbigene

position:2471154:-1
position: 2471154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2479985:-1
position: 2479985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2471154-2479985:-1:exon

PUS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PUS3
product: pseudouridine synthase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_034754676.1
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: complement(join(2471154..2472244,2472371..2472561,2473096..2473664,2475442..2475886,2479907..2479985))
location: region:2471154-2479985:-1
so has part: feature:2479907-2479985:-1:exon
so has part: feature:2475442-2475886:-1:exon
so has part: feature:2473096-2473664:-1:exon
so has part: feature:2472371-2472561:-1:exon
so has part: feature:2471154-2472244:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2479907-2479985:-1:exon

position:2479907:-1
position: 2479907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2475442-2475886:-1:exon

position:2475442:-1
position: 2475442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2475886:-1
position: 2475886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2473096-2473664:-1:exon

position:2473096:-1
position: 2473096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2473664:-1
position: 2473664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2472371-2472561:-1:exon

position:2472371:-1
position: 2472371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2472561:-1
position: 2472561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2471154-2472244:-1:exon

position:2472244:-1
position: 2472244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PUS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PUS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA pseudouridine(38/39) synthase
translation: MAEMGVEKDKGEGLLKRVQELEEEVKRLQEKLLEGKEGTDIKSNPSALGKTKKRQQRPFDFSAYGRRHVALKIAYLGWGYQGFASQENTSNTIEEKLFEALSKTRLVDNRQTSNYHRCGRTDKGVSAFGQVISLDLRSNLSEGKKVNGHEGGLEDKTSSPANEIRYTHILNRVLPPDIRVLAWAPVEPSFSARFSCLKRTYRYFFPRADLDVALMNAAAQKYVGTHDFRNLCKMDVANGVTNFQRTILTAQVQLVDRRGETGLQDPFQLYQFEVTGQAFLYHQVRCMMAILLLIGQSMENPEIIDELLDVEKNPRKPQYSMAVEFPLVLYDCEFENIQWIYDQEVQEFNVTHLQQLWANHAVKTHMLYNMLQGLDSAVIPTGPGPEKDRMVLWREVKPPVHNQVSSFIEGVKARTYKPLLARPKCEGLESRINHFVRRGRIELPHCREKETGADKEEHLEIKRGHNDSAEKDSEVPGQAAKRVCVDTVQEL
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: complement(join(2471919..2472244,2472371..2472561,2473096..2473664,2475442..2475831))
location: region:2471919-2475831:-1
so has part: feature:2475442-2475831:-1:exon
so has part: feature:2473096-2473664:-1:exon
so has part: feature:2472371-2472561:-1:exon
so has part: feature:2471919-2472244:-1:exon

XP_034610567.1
type: Protein
SIO_000068: ncbiprotein

position:2471919:-1
position: 2471919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2475831:-1
position: 2475831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2475442-2475831:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2473096-2473664:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2472371-2472561:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2471919-2472244:-1:exon

HYLS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: HYLS1
product: HYLS1 centriolar and ciliogenesis associated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_034754677.1
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: join(2472038..2472142,2477416..2478873)
location: region:2472038-2478873:1
so has part: feature:2472038-2472142:1:exon
so has part: feature:2477416-2478873:1:exon

position:2472038:1
position: 2472038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2472038-2472142:1:exon

position:2472142:1
position: 2472142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2477416-2478873:1:exon

HYLS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: HYLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydrolethalus syndrome protein 1
translation: MEALIGPDRYRWATMNHKERMAAAAAMAFTQLCAEQGDGDSLRGTYAPTQYDPYSKASVTSGIRPSLHLLMRHHQAEHSMQPETLSEGPRGPRKPVMKRKVLRRMPDGEVHVSDESVTSEPETSAESDPEISDLRLRLLHLHPHQEDTASEVESEPNHSSHGKFYLDLPRRSGSHGDPPFLPRDCHGQGSPVYEQDLIMAGQPKSFIPPRLEQQGRNRGKIDRVARYFEYKRDWESFRIPGEDHRKELRWGIREQMLYKPDLPTRSQHIYVPNNYLVPTEKKRSALRWGVRCDLASGLIPRKSSFSS
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: 2477450..2478373
location: region:2477450-2478373:1
so has part: feature:2477450-2478373:1:exon

XP_034610568.1
type: Protein
SIO_000068: ncbiprotein

position:2477450:1
position: 2477450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2478373:1
position: 2478373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2477450-2478373:1:exon

HYLS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: HYLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydrolethalus syndrome protein 1
translation: MEALIGPDRYRWATMNHKERMAAAAAMAFTQLCAEQGDGDSLRGTYAPTQYDPYSKASVTSGIRPSLHLLMRHHQAEHSMQPETLSEGPRGPRKPVMKRKVLRRMPDGEVHVSDESVTSEPETSAESDPEISDLRLRLLHLHPHQEDTASEVESEPNHSSHGKFYLDLPRRSGSHGDPPFLPRDCHGQGSPVYEQDLIMAGQPKSFIPPRLEQQGRNRGKIDRVARYFEYKRDWESFRIPGEDHRKELRWGIREQMLYKPDLPTRSQHIYVPNNYLVPTEKKRSALRWGVRCDLASGLIPRKSSFSS
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: 2477450..2478373
location: region:2477450-2478373:1
so has part: feature:2477450-2478373:1:exon

XP_034610569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2477450-2478373:1:exon

HYLS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: HYLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydrolethalus syndrome protein 1
translation: MEALIGPDRYRWATMNHKERMAAAAAMAFTQLCAEQGDGDSLRGTYAPTQYDPYSKASVTSGIRPSLHLLMRHHQAEHSMQPETLSEGPRGPRKPVMKRKVLRRMPDGEVHVSDESVTSEPETSAESDPEISDLRLRLLHLHPHQEDTASEVESEPNHSSHGKFYLDLPRRSGSHGDPPFLPRDCHGQGSPVYEQDLIMAGQPKSFIPPRLEQQGRNRGKIDRVARYFEYKRDWESFRIPGEDHRKELRWGIREQMLYKPDLPTRSQHIYVPNNYLVPTEKKRSALRWGVRCDLASGLIPRKSSFSS
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: 2477450..2478373
location: region:2477450-2478373:1
so has part: feature:2477450-2478373:1:exon

XP_034610570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2477450-2478373:1:exon

HYLS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: HYLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydrolethalus syndrome protein 1
translation: MEALIGPDRYRWATMNHKERMAAAAAMAFTQLCAEQGDGDSLRGTYAPTQYDPYSKASVTSGIRPSLHLLMRHHQAEHSMQPETLSEGPRGPRKPVMKRKVLRRMPDGEVHVSDESVTSEPETSAESDPEISDLRLRLLHLHPHQEDTASEVESEPNHSSHGKFYLDLPRRSGSHGDPPFLPRDCHGQGSPVYEQDLIMAGQPKSFIPPRLEQQGRNRGKIDRVARYFEYKRDWESFRIPGEDHRKELRWGIREQMLYKPDLPTRSQHIYVPNNYLVPTEKKRSALRWGVRCDLASGLIPRKSSFSS
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: 2477450..2478373
location: region:2477450-2478373:1
so has part: feature:2477450-2478373:1:exon

XP_034610571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2477450-2478373:1:exon

DDX25
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: DDX25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2484655..2538851
location: region:2484655-2538851:1
so has part: feature:2484655-2538851:1:exon
subclass of: SO_0000010

117868548
type: Gene
SIO_000068: ncbigene

position:2484655:1
position: 2484655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2538851:1
position: 2538851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2484655-2538851:1:exon

DDX25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: DDX25
product: DEAD-box helicase 25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_034754601.1
SIO_010081: DDX25
subclass of: SO_0000673
so part of: DDX25
location: join(2484655..2484735,2496310..2496376,2499341..2499391,2506453..2506588,2508167..2508259,2511950..2512052,2520148..2520262,2520595..2520772,2521740..2521977,2525108..2525270,2532366..2532554,2538625..2538851)
location: region:2484655-2538851:1
so has part: feature:2484655-2484735:1:exon
so has part: feature:2496310-2496376:1:exon
so has part: feature:2499341-2499391:1:exon
so has part: feature:2506453-2506588:1:exon
so has part: feature:2508167-2508259:1:exon
so has part: feature:2511950-2512052:1:exon
so has part: feature:2520148-2520262:1:exon
so has part: feature:2520595-2520772:1:exon
so has part: feature:2521740-2521977:1:exon
so has part: feature:2525108-2525270:1:exon
so has part: feature:2532366-2532554:1:exon
so has part: feature:2538625-2538851:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2484655-2484735:1:exon

position:2484735:1
position: 2484735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2496310-2496376:1:exon

position:2496310:1
position: 2496310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2496376:1
position: 2496376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2499341-2499391:1:exon

position:2499341:1
position: 2499341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2499391:1
position: 2499391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2506453-2506588:1:exon

position:2506453:1
position: 2506453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506588:1
position: 2506588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2508167-2508259:1:exon

position:2508167:1
position: 2508167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2508259:1
position: 2508259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2511950-2512052:1:exon

position:2511950:1
position: 2511950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2512052:1
position: 2512052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2520148-2520262:1:exon

position:2520148:1
position: 2520148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2520262:1
position: 2520262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2520595-2520772:1:exon

position:2520595:1
position: 2520595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2520772:1
position: 2520772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2521740-2521977:1:exon

position:2521740:1
position: 2521740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2521977:1
position: 2521977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2525108-2525270:1:exon

position:2525108:1
position: 2525108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2525270:1
position: 2525270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2532366-2532554:1:exon

position:2532366:1
position: 2532366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2532554:1
position: 2532554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2538625-2538851:1:exon

position:2538625:1
position: 2538625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DDX25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: DDX25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX25
translation: MASQGRGWVDRDTAGLAHSFSGLCTPWKSLRGIRNASFPTLGKKYASSGEEEDKEDDKVDLAENSLLNKLIRKSLVESNHHVEVLQRDPSSPLFSVKTFEELHLKKELLQGIYEMGFNRPSKIQETALPMMLADPPQNLIAQSQSGTGKTAAFVLAMLSRVNGAEKFPQCLCLAPTYELAVQTGQVVEKMGKLCVNIGVAYAVRGNRIPRGTKIEEQIIIGTPGSVLDWCFKLKLLDVQKISVFVLDEADVMIDTQGFLDQSVRIQRTLPQRCQMLLFSATFEDAVLRFAEQIIPDPNIIKLRREEMTLTNIRQYYFLCENKQDKYKALCNIYGSITVGQAVIFCQTRRNAKWLSQKLSQDGHKVSVLSGELTVEQRAAVIQRFRDGKEKVLVTTNVCARGIDVKQVTIVVNFKLPTNQLQCPDFETYLHRIGRTGRFGKKGLAFNMVERHNLPLLHSIEEHFKTKIKQLDPDDMDEIEKIES
SIO_010081: DDX25
subclass of: SO_0000673
so part of: DDX25
location: join(2484679..2484735,2496310..2496376,2499341..2499391,2506453..2506588,2508167..2508259,2511950..2512052,2520148..2520262,2520595..2520772,2521740..2521977,2525108..2525270,2532366..2532554,2538625..2538686)
location: region:2484679-2538686:1
so has part: feature:2484679-2484735:1:exon
so has part: feature:2496310-2496376:1:exon
so has part: feature:2499341-2499391:1:exon
so has part: feature:2506453-2506588:1:exon
so has part: feature:2508167-2508259:1:exon
so has part: feature:2511950-2512052:1:exon
so has part: feature:2520148-2520262:1:exon
so has part: feature:2520595-2520772:1:exon
so has part: feature:2521740-2521977:1:exon
so has part: feature:2525108-2525270:1:exon
so has part: feature:2532366-2532554:1:exon
so has part: feature:2538625-2538686:1:exon

XP_034610492.1
type: Protein
SIO_000068: ncbiprotein

position:2484679:1
position: 2484679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2538686:1
position: 2538686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2484679-2484735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2496310-2496376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2499341-2499391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2506453-2506588:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2508167-2508259:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2511950-2512052:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2520148-2520262:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2520595-2520772:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2521740-2521977:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2525108-2525270:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2532366-2532554:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2538625-2538686:1:exon

VSIG10L2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: VSIG10L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2602453..2626055
location: region:2602453-2626055:1
so has part: feature:2602453-2626055:1:exon
subclass of: SO_0000010

117868695
type: Gene
SIO_000068: ncbigene

position:2602453:1
position: 2602453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2626055:1
position: 2626055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2602453-2626055:1:exon

VSIG10L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: VSIG10L2
product: V-set and immunoglobulin domain containing 10 like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_034754892.1
SIO_010081: VSIG10L2
subclass of: SO_0000673
so part of: VSIG10L2
location: join(2602453..2602531,2604027..2604374,2608893..2609168,2609728..2610003,2612267..2612527,2613776..2614036,2616411..2616701,2618739..2619053,2625796..2626055)
location: region:2602453-2626055:1
so has part: feature:2602453-2602531:1:exon
so has part: feature:2604027-2604374:1:exon
so has part: feature:2608893-2609168:1:exon
so has part: feature:2609728-2610003:1:exon
so has part: feature:2612267-2612527:1:exon
so has part: feature:2613776-2614036:1:exon
so has part: feature:2616411-2616701:1:exon
so has part: feature:2618739-2619053:1:exon
so has part: feature:2625796-2626055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2602453-2602531:1:exon

position:2602531:1
position: 2602531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2604027-2604374:1:exon

position:2604027:1
position: 2604027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2604374:1
position: 2604374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2608893-2609168:1:exon

position:2608893:1
position: 2608893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2609168:1
position: 2609168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2609728-2610003:1:exon

position:2609728:1
position: 2609728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2610003:1
position: 2610003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2612267-2612527:1:exon

position:2612267:1
position: 2612267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2612527:1
position: 2612527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2613776-2614036:1:exon

position:2613776:1
position: 2613776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2614036:1
position: 2614036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2616411-2616701:1:exon

position:2616411:1
position: 2616411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2616701:1
position: 2616701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2618739-2619053:1:exon

position:2618739:1
position: 2618739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2619053:1
position: 2619053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2625796-2626055:1:exon

position:2625796:1
position: 2625796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VSIG10L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: VSIG10L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-set and immunoglobulin domain-containing protein 10-like 2
translation: MDYGPARNSPFRNLLKIFCLLPTVAYAQLLHPGDAKYEEQAVRGVRHQSVQLACGDVVSPMVVFWSFTKLGSLVPRAVAISNGIESKVEKASAALGQVSLQNGTLEVSDLQTAAQGHFMCQAMFEEDGEIKVGYFYIELVVLVPVPKPFLQMTDPTPVEGTVVMMTCAVKEGTPPIGYSWHRHTNREGAVAVAEAAGGLLNLTAANRTDMGWYACTAHNEVNSQTSDRMYLDVIYGPDEPVINVEPFAINQNGFSANEQEEVILTCLAPSNPPSHYIWFYNSSQIYSGQKYVIAKISRTQTGTYTCLAQNTHLNTRTQTTIILTVYYLPEGKPSCTPVPAANFRDIALQCSWPGGFPPARLRWVRAGREADAAASYSNATRIHRGVDIRNGSSYTCLASHPALREDAVCTTTVWVPVGNPTCSAMATKQNEFLMLSCDWAGGLPRVTLWWRDWRNRVLGGLKPSSNIYVMQSNSTLGGKEFTCIAAHPLQARATECLVRLDVPKLAAERTEVSLFEGGEVQLACALQGPHLGSEVFWFNNKHQVIRPDAAKYRLQQSDAWFNLTIWDTEWMRDSGTYHCAAVNAVGNTTVPIRLRVKKYPTPPNVTISKLMYTRQRTEVQLEWVTQGSGNLTGFVVQRQEAKKSSLGPSRSAARAWETVASDIEPDIRDHRVGGLDPAVVYAFRILAVNHRTTGHPSEGKTPADPPFNAYPAVIGAAVAGMVVAAVASLLGFQYIVRNRDNNPRECGGGRGLFSLPLGLFRSGEAGAAESTGLEHGEYPCSTARLGPS
SIO_010081: VSIG10L2
subclass of: SO_0000673
so part of: VSIG10L2
location: join(2602453..2602531,2604027..2604374,2608893..2609168,2609728..2610003,2612267..2612527,2613776..2614036,2616411..2616701,2618739..2619053,2625796..2626055)
location: region:2602453-2626055:1
so has part: feature:2602453-2602531:1:exon
so has part: feature:2604027-2604374:1:exon
so has part: feature:2608893-2609168:1:exon
so has part: feature:2609728-2610003:1:exon
so has part: feature:2612267-2612527:1:exon
so has part: feature:2613776-2614036:1:exon
so has part: feature:2616411-2616701:1:exon
so has part: feature:2618739-2619053:1:exon
so has part: feature:2625796-2626055:1:exon

XP_034610783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2602453-2602531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2604027-2604374:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2608893-2609168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2609728-2610003:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2612267-2612527:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2613776-2614036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2616411-2616701:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2618739-2619053:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2625796-2626055:1:exon

CDON
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2642469..2736381)
location: region:2642469-2736381:-1
so has part: feature:2642469-2736381:-1:exon
subclass of: SO_0000010

117868506
type: Gene
SIO_000068: ncbigene

position:2642469:-1
position: 2642469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2736381:-1
position: 2736381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2642469-2736381:-1:exon

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_034754487.1
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(2642469..2643597,2645903..2646156,2657039..2657118,2659663..2659949,2661007..2661234,2663594..2663716,2670800..2670905,2673657..2673838,2674741..2674947,2677090..2677218,2678990..2679164,2680981..2681273,2685690..2686043,2686874..2687143,2689153..2689440,2690331..2690474,2690757..2690903,2698131..2698403,2700936..2701070,2736254..2736381))
location: region:2642469-2736381:-1
so has part: feature:2736254-2736381:-1:exon
so has part: feature:2700936-2701070:-1:exon
so has part: feature:2698131-2698403:-1:exon
so has part: feature:2690757-2690903:-1:exon
so has part: feature:2690331-2690474:-1:exon
so has part: feature:2689153-2689440:-1:exon
so has part: feature:2686874-2687143:-1:exon
so has part: feature:2685690-2686043:-1:exon
so has part: feature:2680981-2681273:-1:exon
so has part: feature:2678990-2679164:-1:exon
so has part: feature:2677090-2677218:-1:exon
so has part: feature:2674741-2674947:-1:exon
so has part: feature:2673657-2673838:-1:exon
so has part: feature:2670800-2670905:-1:exon
so has part: feature:2663594-2663716:-1:exon
so has part: feature:2661007-2661234:-1:exon
so has part: feature:2659663-2659949:-1:exon
so has part: feature:2657039-2657118:-1:exon
so has part: feature:2645903-2646156:-1:exon
so has part: feature:2642469-2643597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2736254-2736381:-1:exon

position:2736254:-1
position: 2736254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2700936-2701070:-1:exon

position:2700936:-1
position: 2700936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2701070:-1
position: 2701070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2698131-2698403:-1:exon

position:2698131:-1
position: 2698131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2698403:-1
position: 2698403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2690757-2690903:-1:exon

position:2690757:-1
position: 2690757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2690903:-1
position: 2690903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2690331-2690474:-1:exon

position:2690331:-1
position: 2690331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2690474:-1
position: 2690474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2689153-2689440:-1:exon

position:2689153:-1
position: 2689153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2689440:-1
position: 2689440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2686874-2687143:-1:exon

position:2686874:-1
position: 2686874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2687143:-1
position: 2687143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2685690-2686043:-1:exon

position:2685690:-1
position: 2685690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2686043:-1
position: 2686043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2680981-2681273:-1:exon

position:2680981:-1
position: 2680981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2681273:-1
position: 2681273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2678990-2679164:-1:exon

position:2678990:-1
position: 2678990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2679164:-1
position: 2679164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2677090-2677218:-1:exon

position:2677090:-1
position: 2677090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2677218:-1
position: 2677218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2674741-2674947:-1:exon

position:2674741:-1
position: 2674741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2674947:-1
position: 2674947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2673657-2673838:-1:exon

position:2673657:-1
position: 2673657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2673838:-1
position: 2673838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2670800-2670905:-1:exon

position:2670800:-1
position: 2670800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2670905:-1
position: 2670905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2663594-2663716:-1:exon

position:2663594:-1
position: 2663594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2663716:-1
position: 2663716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2661007-2661234:-1:exon

position:2661007:-1
position: 2661007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2661234:-1
position: 2661234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2659663-2659949:-1:exon

position:2659663:-1
position: 2659663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2659949:-1
position: 2659949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2657039-2657118:-1:exon

position:2657039:-1
position: 2657039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2657118:-1
position: 2657118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2645903-2646156:-1:exon

position:2645903:-1
position: 2645903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2646156:-1
position: 2646156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2642469-2643597:-1:exon

position:2643597:-1
position: 2643597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X1
translation: MHPDPRPLQALLFITAAVIFSATSSDLIPHFISEPLSTIQKPGGPVKLHCSAEPSTARISWLFNGQRLDSRVEQVEVQLGSLTIFSLSPSNSGHYQCIANYSAGAIVSRPATVSIGHLDDFDTSVKHIVTAEEGSAAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAAYNPVTHDLKLEPTGHKLIVSRTSAEGFRILHPTVSLALAVPQHSPLTLECVVSGLPASHVHWFKDGQDALTGSRWRLLHSHLVTDRLDTLDAGNYSCVVANQSGVVKYINYTVTILESASISKGLQDQTVAVGATIHFTCDIHGNPAPNLTWFHNAAPIHLSPRHLVTGNRLRISGITKEDSGLYQCVANNGIGFMQSTGRLQVQTGKGYKPVIVSSPASANVVDGGDVTLSCNATGLPIPVIRWYNSRGLITSHPSQVLHSKPRKSPQARRGSMILEPIYFTMSRAGSSSLYIQAVTPEHAGKYSCEATNKHGSALSEAFLTVVPFESSTKAEEVTPTEVAQSDEGDGDYDTEVGFSNLSPTKLHLDAVATEKTPNGALPPEAPIILSPPQTLKPDMYNLVWRSGKDGGLPINAYFVKYRKLDDGVNAMGSWHTVRVPGSENELHLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPLGIPKHPVIQEGSNNFGVVLPDLSRHSGVPEAPDRPAISTASETSVYVTWIPRANGGSPITAFKVEYKRMSRNSDWLIAANSISPSNLSVEVRNLEPGATYKFRVIAVNNYGDSPRSSPSRPYQVAGFTNRFSNRPITGPHIAYTEAVSDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKREIVEGTKQWHLISHLQPETSYDIKMQCYNEGGESEYSNVMMCETKVKRTPGASEYPVKDLSTPPNSPDRAGGGNAGPSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNAMQKYDPPGYLYQGADINGQMVEYATLPGTSRINGSIHGNFISNGSLSNGCPHLHHKVPNGVNGIMNGGLNGGTGLYLGHTNSLSRTHMDYEHPHHLVNGGGMYTAVPQTDPSECINCRNCRNNNRCFTKTNGTFSSNTLPVVPIVAPYQQDSLEMKPMNHVMVAMCLASTVPECSVELEEDSKEKVEQPSTQHSCCQENMNQINIDYPEGDICARSETSNHILSWSPLILQPVSKDCNEKSGWNSPGVTLNSSGDLRQLQMQET
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(2643431..2643597,2645903..2646156,2657039..2657118,2659663..2659949,2661007..2661234,2663594..2663716,2670800..2670905,2673657..2673838,2674741..2674947,2677090..2677218,2678990..2679164,2680981..2681273,2685690..2686043,2686874..2687143,2689153..2689440,2690331..2690474,2690757..2690903,2698131..2698403,2700936..2701011))
location: region:2643431-2701011:-1
so has part: feature:2700936-2701011:-1:exon
so has part: feature:2698131-2698403:-1:exon
so has part: feature:2690757-2690903:-1:exon
so has part: feature:2690331-2690474:-1:exon
so has part: feature:2689153-2689440:-1:exon
so has part: feature:2686874-2687143:-1:exon
so has part: feature:2685690-2686043:-1:exon
so has part: feature:2680981-2681273:-1:exon
so has part: feature:2678990-2679164:-1:exon
so has part: feature:2677090-2677218:-1:exon
so has part: feature:2674741-2674947:-1:exon
so has part: feature:2673657-2673838:-1:exon
so has part: feature:2670800-2670905:-1:exon
so has part: feature:2663594-2663716:-1:exon
so has part: feature:2661007-2661234:-1:exon
so has part: feature:2659663-2659949:-1:exon
so has part: feature:2657039-2657118:-1:exon
so has part: feature:2645903-2646156:-1:exon
so has part: feature:2643431-2643597:-1:exon

XP_034610378.1
type: Protein
SIO_000068: ncbiprotein

position:2643431:-1
position: 2643431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2701011:-1
position: 2701011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2700936-2701011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2698131-2698403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2690757-2690903:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2690331-2690474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2689153-2689440:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2686874-2687143:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2685690-2686043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2680981-2681273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2678990-2679164:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2677090-2677218:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2674741-2674947:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2673657-2673838:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2670800-2670905:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2663594-2663716:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2661007-2661234:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2659663-2659949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2657039-2657118:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2645903-2646156:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2643431-2643597:-1:exon

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_034754492.1
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(2643514..2643597,2657039..2657118,2659663..2659949,2661007..2661234,2663594..2663716,2670800..2670905,2673657..2673838,2674741..2674947,2677090..2677218,2678990..2679164,2680981..2681273,2685690..2686043,2686874..2687143,2689153..2689440,2690331..2690474,2690757..2690903,2698131..2698403,2700936..2701070,2736254..2736381))
location: region:2643514-2736381:-1
so has part: feature:2736254-2736381:-1:exon
so has part: feature:2700936-2701070:-1:exon
so has part: feature:2698131-2698403:-1:exon
so has part: feature:2690757-2690903:-1:exon
so has part: feature:2690331-2690474:-1:exon
so has part: feature:2689153-2689440:-1:exon
so has part: feature:2686874-2687143:-1:exon
so has part: feature:2685690-2686043:-1:exon
so has part: feature:2680981-2681273:-1:exon
so has part: feature:2678990-2679164:-1:exon
so has part: feature:2677090-2677218:-1:exon
so has part: feature:2674741-2674947:-1:exon
so has part: feature:2673657-2673838:-1:exon
so has part: feature:2670800-2670905:-1:exon
so has part: feature:2663594-2663716:-1:exon
so has part: feature:2661007-2661234:-1:exon
so has part: feature:2659663-2659949:-1:exon
so has part: feature:2657039-2657118:-1:exon
so has part: feature:2643514-2643597:-1:exon

position:2643514:-1
position: 2643514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2736254-2736381:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2700936-2701070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2698131-2698403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2690757-2690903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2690331-2690474:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2689153-2689440:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2686874-2687143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2685690-2686043:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2680981-2681273:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2678990-2679164:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2677090-2677218:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2674741-2674947:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2673657-2673838:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2670800-2670905:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2663594-2663716:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2661007-2661234:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2659663-2659949:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2657039-2657118:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2643514-2643597:-1:exon

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X5
translation: MHPDPRPLQALLFITAAVIFSATSSDLIPHFISEPLSTIQKPGGPVKLHCSAEPSTARISWLFNGQRLDSRVEQVEVQLGSLTIFSLSPSNSGHYQCIANYSAGAIVSRPATVSIGHLDDFDTSVKHIVTAEEGSAAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAAYNPVTHDLKLEPTGHKLIVSRTSAEGFRILHPTVSLALAVPQHSPLTLECVVSGLPASHVHWFKDGQDALTGSRWRLLHSHLVTDRLDTLDAGNYSCVVANQSGVVKYINYTVTILESASISKGLQDQTVAVGATIHFTCDIHGNPAPNLTWFHNAAPIHLSPRHLVTGNRLRISGITKEDSGLYQCVANNGIGFMQSTGRLQVQTGKGYKPVIVSSPASANVVDGGDVTLSCNATGLPIPVIRWYNSRGLITSHPSQVLHSKPRKSPQARRGSMILEPIYFTMSRAGSSSLYIQAVTPEHAGKYSCEATNKHGSALSEAFLTVVPFESSTKAEEVTPTEVAQSDEGDGDYDTEVGFSNLSPTKLHLDAVATEKTPNGALPPEAPIILSPPQTLKPDMYNLVWRSGKDGGLPINAYFVKYRKLDDGVNAMGSWHTVRVPGSENELHLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPLGIPKHPVIQEGSNNFGVVLPDLSRHSGVPEAPDRPAISTASETSVYVTWIPRANGGSPITAFKVEYKRMSRNSDWLIAANSISPSNLSVEVRNLEPGATYKFRVIAVNNYGDSPRSSPSRPYQVAGFTNRFSNRPITGPHIAYTEAVSDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKREIVEGTKQWHLISHLQPETSYDIKMQCYNEGGESEYSNVMMCETKVKRTPGASEYPVKDLSTPPNSPDRAGGGNAGPSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNAMQKYDPPGYLYQGADINGQMVEYATLPGTSRINGSIHGNFISNGSLSNGCPHLHHKVPNGVNGIMNGGLNGGTGLYLGHTNSLSRTHMDYEHPHHLVNGGGMYTAVPQTDPSECINCRNCRNNNR
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(2643594..2643597,2657039..2657118,2659663..2659949,2661007..2661234,2663594..2663716,2670800..2670905,2673657..2673838,2674741..2674947,2677090..2677218,2678990..2679164,2680981..2681273,2685690..2686043,2686874..2687143,2689153..2689440,2690331..2690474,2690757..2690903,2698131..2698403,2700936..2701011))
location: region:2643594-2701011:-1
so has part: feature:2700936-2701011:-1:exon
so has part: feature:2698131-2698403:-1:exon
so has part: feature:2690757-2690903:-1:exon
so has part: feature:2690331-2690474:-1:exon
so has part: feature:2689153-2689440:-1:exon
so has part: feature:2686874-2687143:-1:exon
so has part: feature:2685690-2686043:-1:exon
so has part: feature:2680981-2681273:-1:exon
so has part: feature:2678990-2679164:-1:exon
so has part: feature:2677090-2677218:-1:exon
so has part: feature:2674741-2674947:-1:exon
so has part: feature:2673657-2673838:-1:exon
so has part: feature:2670800-2670905:-1:exon
so has part: feature:2663594-2663716:-1:exon
so has part: feature:2661007-2661234:-1:exon
so has part: feature:2659663-2659949:-1:exon
so has part: feature:2657039-2657118:-1:exon
so has part: feature:2643594-2643597:-1:exon

XP_034610383.1
type: Protein
SIO_000068: ncbiprotein

position:2643594:-1
position: 2643594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2700936-2701011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2698131-2698403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2690757-2690903:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2690331-2690474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2689153-2689440:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2686874-2687143:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2685690-2686043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2680981-2681273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2678990-2679164:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2677090-2677218:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2674741-2674947:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2673657-2673838:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2670800-2670905:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2663594-2663716:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2661007-2661234:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2659663-2659949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2657039-2657118:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2643594-2643597:-1:exon

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034754488.1
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(2646081..2646156,2646957..2647047,2657039..2657118,2659663..2659949,2661007..2661234,2663594..2663716,2670800..2670905,2673657..2673838,2674741..2674947,2677090..2677218,2678990..2679164,2680981..2681273,2685690..2686043,2686874..2687143,2689153..2689440,2690331..2690474,2690757..2690903,2698131..2698403,2700936..2701070,2736254..2736381))
location: region:2646081-2736381:-1
so has part: feature:2736254-2736381:-1:exon
so has part: feature:2700936-2701070:-1:exon
so has part: feature:2698131-2698403:-1:exon
so has part: feature:2690757-2690903:-1:exon
so has part: feature:2690331-2690474:-1:exon
so has part: feature:2689153-2689440:-1:exon
so has part: feature:2686874-2687143:-1:exon
so has part: feature:2685690-2686043:-1:exon
so has part: feature:2680981-2681273:-1:exon
so has part: feature:2678990-2679164:-1:exon
so has part: feature:2677090-2677218:-1:exon
so has part: feature:2674741-2674947:-1:exon
so has part: feature:2673657-2673838:-1:exon
so has part: feature:2670800-2670905:-1:exon
so has part: feature:2663594-2663716:-1:exon
so has part: feature:2661007-2661234:-1:exon
so has part: feature:2659663-2659949:-1:exon
so has part: feature:2657039-2657118:-1:exon
so has part: feature:2646957-2647047:-1:exon
so has part: feature:2646081-2646156:-1:exon

position:2646081:-1
position: 2646081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2736254-2736381:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2700936-2701070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2698131-2698403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2690757-2690903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2690331-2690474:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2689153-2689440:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2686874-2687143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2685690-2686043:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2680981-2681273:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2678990-2679164:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2677090-2677218:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2674741-2674947:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2673657-2673838:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2670800-2670905:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2663594-2663716:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2661007-2661234:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2659663-2659949:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2657039-2657118:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2646957-2647047:-1:exon

position:2646957:-1
position: 2646957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2647047:-1
position: 2647047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2646081-2646156:-1:exon

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X2
translation: MHPDPRPLQALLFITAAVIFSATSSDLIPHFISEPLSTIQKPGGPVKLHCSAEPSTARISWLFNGQRLDSRVEQVEVQLGSLTIFSLSPSNSGHYQCIANYSAGAIVSRPATVSIGHLDDFDTSVKHIVTAEEGSAAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAAYNPVTHDLKLEPTGHKLIVSRTSAEGFRILHPTVSLALAVPQHSPLTLECVVSGLPASHVHWFKDGQDALTGSRWRLLHSHLVTDRLDTLDAGNYSCVVANQSGVVKYINYTVTILESASISKGLQDQTVAVGATIHFTCDIHGNPAPNLTWFHNAAPIHLSPRHLVTGNRLRISGITKEDSGLYQCVANNGIGFMQSTGRLQVQTGKGYKPVIVSSPASANVVDGGDVTLSCNATGLPIPVIRWYNSRGLITSHPSQVLHSKPRKSPQARRGSMILEPIYFTMSRAGSSSLYIQAVTPEHAGKYSCEATNKHGSALSEAFLTVVPFESSTKAEEVTPTEVAQSDEGDGDYDTEVGFSNLSPTKLHLDAVATEKTPNGALPPEAPIILSPPQTLKPDMYNLVWRSGKDGGLPINAYFVKYRKLDDGVNAMGSWHTVRVPGSENELHLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPLGIPKHPVIQEGSNNFGVVLPDLSRHSGVPEAPDRPAISTASETSVYVTWIPRANGGSPITAFKVEYKRMSRNSDWLIAANSISPSNLSVEVRNLEPGATYKFRVIAVNNYGDSPRSSPSRPYQVAGFTNRFSNRPITGPHIAYTEAVSDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKREIVEGTKQWHLISHLQPETSYDIKMQCYNEGGESEYSNVMMCETKVKRTPGASEYPVKDLSTPPNSPDRAGGGNAGPSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNAMQKYDPPGYLYQGADINGQMVEYATLPGTSRINGSIHGNFISNGSLSNGCPHLHHKVPNGVNGIMNGGLNGGTGLYLGHTNSLSRTHMDYEHPHHLVNGGGMYTAVPQTDPSECINCRNCRNNNRAGQMKECHLIDNRWGKNAKQMIL
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(2646975..2647047,2657039..2657118,2659663..2659949,2661007..2661234,2663594..2663716,2670800..2670905,2673657..2673838,2674741..2674947,2677090..2677218,2678990..2679164,2680981..2681273,2685690..2686043,2686874..2687143,2689153..2689440,2690331..2690474,2690757..2690903,2698131..2698403,2700936..2701011))
location: region:2646975-2701011:-1
so has part: feature:2700936-2701011:-1:exon
so has part: feature:2698131-2698403:-1:exon
so has part: feature:2690757-2690903:-1:exon
so has part: feature:2690331-2690474:-1:exon
so has part: feature:2689153-2689440:-1:exon
so has part: feature:2686874-2687143:-1:exon
so has part: feature:2685690-2686043:-1:exon
so has part: feature:2680981-2681273:-1:exon
so has part: feature:2678990-2679164:-1:exon
so has part: feature:2677090-2677218:-1:exon
so has part: feature:2674741-2674947:-1:exon
so has part: feature:2673657-2673838:-1:exon
so has part: feature:2670800-2670905:-1:exon
so has part: feature:2663594-2663716:-1:exon
so has part: feature:2661007-2661234:-1:exon
so has part: feature:2659663-2659949:-1:exon
so has part: feature:2657039-2657118:-1:exon
so has part: feature:2646975-2647047:-1:exon

XP_034610379.1
type: Protein
SIO_000068: ncbiprotein

position:2646975:-1
position: 2646975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2700936-2701011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2698131-2698403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2690757-2690903:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2690331-2690474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2689153-2689440:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2686874-2687143:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2685690-2686043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2680981-2681273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2678990-2679164:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2677090-2677218:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2674741-2674947:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2673657-2673838:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2670800-2670905:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2663594-2663716:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2661007-2661234:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2659663-2659949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2657039-2657118:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2646975-2647047:-1:exon

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034754489.1
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(2648338..2649464,2657039..2657118,2659663..2659949,2661007..2661234,2663594..2663716,2670800..2670905,2673657..2673838,2674741..2674947,2677090..2677218,2678990..2679164,2680981..2681273,2685690..2686043,2686874..2687143,2689153..2689440,2690331..2690474,2690757..2690903,2698131..2698403,2700936..2701070,2736254..2736381))
location: region:2648338-2736381:-1
so has part: feature:2736254-2736381:-1:exon
so has part: feature:2700936-2701070:-1:exon
so has part: feature:2698131-2698403:-1:exon
so has part: feature:2690757-2690903:-1:exon
so has part: feature:2690331-2690474:-1:exon
so has part: feature:2689153-2689440:-1:exon
so has part: feature:2686874-2687143:-1:exon
so has part: feature:2685690-2686043:-1:exon
so has part: feature:2680981-2681273:-1:exon
so has part: feature:2678990-2679164:-1:exon
so has part: feature:2677090-2677218:-1:exon
so has part: feature:2674741-2674947:-1:exon
so has part: feature:2673657-2673838:-1:exon
so has part: feature:2670800-2670905:-1:exon
so has part: feature:2663594-2663716:-1:exon
so has part: feature:2661007-2661234:-1:exon
so has part: feature:2659663-2659949:-1:exon
so has part: feature:2657039-2657118:-1:exon
so has part: feature:2648338-2649464:-1:exon

position:2648338:-1
position: 2648338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2736254-2736381:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2700936-2701070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2698131-2698403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2690757-2690903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2690331-2690474:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2689153-2689440:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2686874-2687143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2685690-2686043:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2680981-2681273:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2678990-2679164:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2677090-2677218:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2674741-2674947:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2673657-2673838:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2670800-2670905:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2663594-2663716:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2661007-2661234:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2659663-2659949:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2657039-2657118:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2648338-2649464:-1:exon

position:2649464:-1
position: 2649464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X3
translation: MHPDPRPLQALLFITAAVIFSATSSDLIPHFISEPLSTIQKPGGPVKLHCSAEPSTARISWLFNGQRLDSRVEQVEVQLGSLTIFSLSPSNSGHYQCIANYSAGAIVSRPATVSIGHLDDFDTSVKHIVTAEEGSAAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAAYNPVTHDLKLEPTGHKLIVSRTSAEGFRILHPTVSLALAVPQHSPLTLECVVSGLPASHVHWFKDGQDALTGSRWRLLHSHLVTDRLDTLDAGNYSCVVANQSGVVKYINYTVTILESASISKGLQDQTVAVGATIHFTCDIHGNPAPNLTWFHNAAPIHLSPRHLVTGNRLRISGITKEDSGLYQCVANNGIGFMQSTGRLQVQTGKGYKPVIVSSPASANVVDGGDVTLSCNATGLPIPVIRWYNSRGLITSHPSQVLHSKPRKSPQARRGSMILEPIYFTMSRAGSSSLYIQAVTPEHAGKYSCEATNKHGSALSEAFLTVVPFESSTKAEEVTPTEVAQSDEGDGDYDTEVGFSNLSPTKLHLDAVATEKTPNGALPPEAPIILSPPQTLKPDMYNLVWRSGKDGGLPINAYFVKYRKLDDGVNAMGSWHTVRVPGSENELHLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPLGIPKHPVIQEGSNNFGVVLPDLSRHSGVPEAPDRPAISTASETSVYVTWIPRANGGSPITAFKVEYKRMSRNSDWLIAANSISPSNLSVEVRNLEPGATYKFRVIAVNNYGDSPRSSPSRPYQVAGFTNRFSNRPITGPHIAYTEAVSDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKREIVEGTKQWHLISHLQPETSYDIKMQCYNEGGESEYSNVMMCETKVKRTPGASEYPVKDLSTPPNSPDRAGGGNAGPSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNAMQKYDPPGYLYQGADINGQMVEYATLPGTSRINGSIHGNFISNGSLSNGCPHLHHKVPNGVNGIMNGGLNGGTGLYLGHTNSLSRTHMDYEHPHHLVNGGGMYTAVPQTDPSECINCRNCRNNNSLTIKCRSDRPI
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(2649428..2649464,2657039..2657118,2659663..2659949,2661007..2661234,2663594..2663716,2670800..2670905,2673657..2673838,2674741..2674947,2677090..2677218,2678990..2679164,2680981..2681273,2685690..2686043,2686874..2687143,2689153..2689440,2690331..2690474,2690757..2690903,2698131..2698403,2700936..2701011))
location: region:2649428-2701011:-1
so has part: feature:2700936-2701011:-1:exon
so has part: feature:2698131-2698403:-1:exon
so has part: feature:2690757-2690903:-1:exon
so has part: feature:2690331-2690474:-1:exon
so has part: feature:2689153-2689440:-1:exon
so has part: feature:2686874-2687143:-1:exon
so has part: feature:2685690-2686043:-1:exon
so has part: feature:2680981-2681273:-1:exon
so has part: feature:2678990-2679164:-1:exon
so has part: feature:2677090-2677218:-1:exon
so has part: feature:2674741-2674947:-1:exon
so has part: feature:2673657-2673838:-1:exon
so has part: feature:2670800-2670905:-1:exon
so has part: feature:2663594-2663716:-1:exon
so has part: feature:2661007-2661234:-1:exon
so has part: feature:2659663-2659949:-1:exon
so has part: feature:2657039-2657118:-1:exon
so has part: feature:2649428-2649464:-1:exon

XP_034610380.1
type: Protein
SIO_000068: ncbiprotein

position:2649428:-1
position: 2649428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2700936-2701011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2698131-2698403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2690757-2690903:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2690331-2690474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2689153-2689440:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2686874-2687143:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2685690-2686043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2680981-2681273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2678990-2679164:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2677090-2677218:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2674741-2674947:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2673657-2673838:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2670800-2670905:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2663594-2663716:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2661007-2661234:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2659663-2659949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2657039-2657118:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2649428-2649464:-1:exon

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034754490.1
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(2655706..2655728,2657039..2657118,2659663..2659949,2661007..2661234,2663594..2663716,2670800..2670905,2673657..2673838,2674741..2674947,2677090..2677218,2678990..2679164,2680981..2681273,2685690..2686043,2686874..2687143,2689153..2689440,2690331..2690474,2690757..2690903,2698131..2698403,2700936..2701070,2736254..2736381))
location: region:2655706-2736381:-1
so has part: feature:2736254-2736381:-1:exon
so has part: feature:2700936-2701070:-1:exon
so has part: feature:2698131-2698403:-1:exon
so has part: feature:2690757-2690903:-1:exon
so has part: feature:2690331-2690474:-1:exon
so has part: feature:2689153-2689440:-1:exon
so has part: feature:2686874-2687143:-1:exon
so has part: feature:2685690-2686043:-1:exon
so has part: feature:2680981-2681273:-1:exon
so has part: feature:2678990-2679164:-1:exon
so has part: feature:2677090-2677218:-1:exon
so has part: feature:2674741-2674947:-1:exon
so has part: feature:2673657-2673838:-1:exon
so has part: feature:2670800-2670905:-1:exon
so has part: feature:2663594-2663716:-1:exon
so has part: feature:2661007-2661234:-1:exon
so has part: feature:2659663-2659949:-1:exon
so has part: feature:2657039-2657118:-1:exon
so has part: feature:2655706-2655728:-1:exon

position:2655706:-1
position: 2655706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2736254-2736381:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2700936-2701070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2698131-2698403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2690757-2690903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2690331-2690474:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2689153-2689440:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2686874-2687143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2685690-2686043:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2680981-2681273:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2678990-2679164:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2677090-2677218:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2674741-2674947:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2673657-2673838:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2670800-2670905:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2663594-2663716:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2661007-2661234:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2659663-2659949:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2657039-2657118:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2655706-2655728:-1:exon

position:2655728:-1
position: 2655728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X4
translation: MHPDPRPLQALLFITAAVIFSATSSDLIPHFISEPLSTIQKPGGPVKLHCSAEPSTARISWLFNGQRLDSRVEQVEVQLGSLTIFSLSPSNSGHYQCIANYSAGAIVSRPATVSIGHLDDFDTSVKHIVTAEEGSAAFIGCKVPESNPKAQVRFRVRGKWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAAYNPVTHDLKLEPTGHKLIVSRTSAEGFRILHPTVSLALAVPQHSPLTLECVVSGLPASHVHWFKDGQDALTGSRWRLLHSHLVTDRLDTLDAGNYSCVVANQSGVVKYINYTVTILESASISKGLQDQTVAVGATIHFTCDIHGNPAPNLTWFHNAAPIHLSPRHLVTGNRLRISGITKEDSGLYQCVANNGIGFMQSTGRLQVQTGKGYKPVIVSSPASANVVDGGDVTLSCNATGLPIPVIRWYNSRGLITSHPSQVLHSKPRKSPQARRGSMILEPIYFTMSRAGSSSLYIQAVTPEHAGKYSCEATNKHGSALSEAFLTVVPFESSTKAEEVTPTEVAQSDEGDGDYDTEVGFSNLSPTKLHLDAVATEKTPNGALPPEAPIILSPPQTLKPDMYNLVWRSGKDGGLPINAYFVKYRKLDDGVNAMGSWHTVRVPGSENELHLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPLGIPKHPVIQEGSNNFGVVLPDLSRHSGVPEAPDRPAISTASETSVYVTWIPRANGGSPITAFKVEYKRMSRNSDWLIAANSISPSNLSVEVRNLEPGATYKFRVIAVNNYGDSPRSSPSRPYQVAGFTNRFSNRPITGPHIAYTEAVSDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKREIVEGTKQWHLISHLQPETSYDIKMQCYNEGGESEYSNVMMCETKVKRTPGASEYPVKDLSTPPNSPDRAGGGNAGPSNGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNAMQKYDPPGYLYQGADINGQMVEYATLPGTSRINGSIHGNFISNGSLSNGCPHLHHKVPNGVNGIMNGGLNGGTGLYLGHTNSLSRTHMDYEHPHHLVNGGGMYTAVPQTDPSECINCRNCRNNNRF
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(2655722..2655728,2657039..2657118,2659663..2659949,2661007..2661234,2663594..2663716,2670800..2670905,2673657..2673838,2674741..2674947,2677090..2677218,2678990..2679164,2680981..2681273,2685690..2686043,2686874..2687143,2689153..2689440,2690331..2690474,2690757..2690903,2698131..2698403,2700936..2701011))
location: region:2655722-2701011:-1
so has part: feature:2700936-2701011:-1:exon
so has part: feature:2698131-2698403:-1:exon
so has part: feature:2690757-2690903:-1:exon
so has part: feature:2690331-2690474:-1:exon
so has part: feature:2689153-2689440:-1:exon
so has part: feature:2686874-2687143:-1:exon
so has part: feature:2685690-2686043:-1:exon
so has part: feature:2680981-2681273:-1:exon
so has part: feature:2678990-2679164:-1:exon
so has part: feature:2677090-2677218:-1:exon
so has part: feature:2674741-2674947:-1:exon
so has part: feature:2673657-2673838:-1:exon
so has part: feature:2670800-2670905:-1:exon
so has part: feature:2663594-2663716:-1:exon
so has part: feature:2661007-2661234:-1:exon
so has part: feature:2659663-2659949:-1:exon
so has part: feature:2657039-2657118:-1:exon
so has part: feature:2655722-2655728:-1:exon

XP_034610381.1
type: Protein
SIO_000068: ncbiprotein

position:2655722:-1
position: 2655722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2700936-2701011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2698131-2698403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2690757-2690903:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2690331-2690474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2689153-2689440:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2686874-2687143:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2685690-2686043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2680981-2681273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2678990-2679164:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2677090-2677218:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2674741-2674947:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2673657-2673838:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2670800-2670905:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2663594-2663716:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2661007-2661234:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2659663-2659949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2657039-2657118:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2655722-2655728:-1:exon

LOC117868696
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3048518..3050027
location: region:3048518-3050027:1
so has part: feature:3048518-3050027:1:exon
subclass of: SO_0000010

117868696
type: Gene
SIO_000068: ncbigene

position:3048518:1
position: 3048518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3050027:1
position: 3050027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3048518-3050027:1:exon

LOC117868696
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868696
product: secreted seminal-vesicle Ly-6 protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_034754893.1
SIO_010081: LOC117868696
subclass of: SO_0000673
so part of: LOC117868696
location: join(3048518..3048569,3048912..3049031,3049873..3050027)
location: region:3048518-3050027:1
so has part: feature:3048518-3048569:1:exon
so has part: feature:3048912-3049031:1:exon
so has part: feature:3049873-3050027:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3048518-3048569:1:exon

position:3048569:1
position: 3048569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3048912-3049031:1:exon

position:3048912:1
position: 3048912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3049031:1
position: 3049031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3049873-3050027:1:exon

position:3049873:1
position: 3049873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117868696
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secreted seminal-vesicle Ly-6 protein 1-like
translation: MNKILALALPALLCLATADPLQCNGCFKLLQDGSCKIGQYTCTASPDESCFTRKITAGNEILRVERGCTVICDDLVLNNYDYKEITQCCTDRAFCNIHNPWPQAPKED
SIO_010081: LOC117868696
subclass of: SO_0000673
so part of: LOC117868696
location: join(3048518..3048569,3048912..3049031,3049873..3050027)
location: region:3048518-3050027:1
so has part: feature:3048518-3048569:1:exon
so has part: feature:3048912-3049031:1:exon
so has part: feature:3049873-3050027:1:exon

XP_034610784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3048518-3048569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3048912-3049031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3049873-3050027:1:exon

LOC117868578
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3056003..3057365
location: region:3056003-3057365:1
so has part: feature:3056003-3057365:1:exon
subclass of: SO_0000010

117868578
type: Gene
SIO_000068: ncbigene

position:3056003:1
position: 3056003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3057365:1
position: 3057365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3056003-3057365:1:exon

LOC117868578
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868578
product: prostate stem cell antigen-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_034754651.1
SIO_010081: LOC117868578
subclass of: SO_0000673
so part of: LOC117868578
location: join(3056003..3056054,3056362..3056481,3057211..3057365)
location: region:3056003-3057365:1
so has part: feature:3056003-3056054:1:exon
so has part: feature:3056362-3056481:1:exon
so has part: feature:3057211-3057365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3056003-3056054:1:exon

position:3056054:1
position: 3056054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3056362-3056481:1:exon

position:3056362:1
position: 3056362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3056481:1
position: 3056481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3057211-3057365:1:exon

position:3057211:1
position: 3057211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117868578
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostate stem cell antigen-like
translation: MNKMLALALPALLCLATAAALQCNGCFMMLQDGSCMLGKHTCTAARGESCFTRKITIAGFINRVERGCTSICEDTEIPEDYYKDTTQCCTDGDFCNIHNPFPKFSDYA
SIO_010081: LOC117868578
subclass of: SO_0000673
so part of: LOC117868578
location: join(3056003..3056054,3056362..3056481,3057211..3057365)
location: region:3056003-3057365:1
so has part: feature:3056003-3056054:1:exon
so has part: feature:3056362-3056481:1:exon
so has part: feature:3057211-3057365:1:exon

XP_034610542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3056003-3056054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3056362-3056481:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3057211-3057365:1:exon

LOC117868634
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3059515..3067371)
location: region:3059515-3067371:-1
so has part: feature:3059515-3067371:-1:exon
subclass of: SO_0000010

117868634
type: Gene
SIO_000068: ncbigene

position:3059515:-1
position: 3059515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3067371:-1
position: 3067371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3059515-3067371:-1:exon

LOC117868634
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868634
product: secreted seminal-vesicle Ly-6 protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034754763.1
SIO_010081: LOC117868634
subclass of: SO_0000673
so part of: LOC117868634
location: complement(join(3059515..3059718,3060230..3060349,3061712..3061918,3067288..3067371))
location: region:3059515-3067371:-1
so has part: feature:3067288-3067371:-1:exon
so has part: feature:3061712-3061918:-1:exon
so has part: feature:3060230-3060349:-1:exon
so has part: feature:3059515-3059718:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3067288-3067371:-1:exon

position:3067288:-1
position: 3067288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3061712-3061918:-1:exon

position:3061712:-1
position: 3061712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3061918:-1
position: 3061918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3060230-3060349:-1:exon

position:3060230:-1
position: 3060230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3060349:-1
position: 3060349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3059515-3059718:-1:exon

position:3059718:-1
position: 3059718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117868634
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secreted seminal-vesicle Ly-6 protein 1-like
translation: MNKMLVPVFTVLLYFATAGALLCHVCVRQQPNKTCLAGKSMCKAAPGESCYLQTLLLGNFPLYAQQGCFRDCQDQVGGTFIRHDFRCCTEDFCNA
SIO_010081: LOC117868634
subclass of: SO_0000673
so part of: LOC117868634
location: complement(join(3059603..3059718,3060230..3060349,3061712..3061763))
location: region:3059603-3061763:-1
so has part: feature:3061712-3061763:-1:exon
so has part: feature:3060230-3060349:-1:exon
so has part: feature:3059603-3059718:-1:exon

XP_034610654.1
type: Protein
SIO_000068: ncbiprotein

position:3059603:-1
position: 3059603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3061763:-1
position: 3061763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3061712-3061763:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3060230-3060349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3059603-3059718:-1:exon

LOC117868635
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3067289..3070122
location: region:3067289-3070122:1
so has part: feature:3067289-3070122:1:exon
subclass of: SO_0000010

117868635
type: Gene
SIO_000068: ncbigene

position:3067289:1
position: 3067289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3070122:1
position: 3070122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3067289-3070122:1:exon

LOC117868635
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868635
product: prostate and testis expressed protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 47% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034754764.1
SIO_010081: LOC117868635
subclass of: SO_0000673
so part of: LOC117868635
location: join(3067289..3067376,3068523..3068642,3069998..3070122)
location: region:3067289-3070122:1
so has part: feature:3067289-3067376:1:exon
so has part: feature:3068523-3068642:1:exon
so has part: feature:3069998-3070122:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3067289-3067376:1:exon

position:3067376:1
position: 3067376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3068523-3068642:1:exon

position:3068523:1
position: 3068523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3068642:1
position: 3068642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3069998-3070122:1:exon

position:3069998:1
position: 3069998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117868635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostate and testis expressed protein 3-like
translation: MNKLLVLGFSALLCCVSAEALRCTVCQNKIPVFGCIKGLGICHPAPGLPCKYIRVYTTGIQFYSQADCAVQGDRCNIIEPTKSGHRQISCCKTDFCNS
SIO_010081: LOC117868635
subclass of: SO_0000673
so part of: LOC117868635
location: join(3067325..3067376,3068523..3068642,3069998..3070122)
location: region:3067325-3070122:1
so has part: feature:3067325-3067376:1:exon
so has part: feature:3068523-3068642:1:exon
so has part: feature:3069998-3070122:1:exon

XP_034610655.1
type: Protein
SIO_000068: ncbiprotein

position:3067325:1
position: 3067325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3067325-3067376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3068523-3068642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3069998-3070122:1:exon

CHEK1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: CHEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3071771..3086559)
location: region:3071771-3086559:-1
so has part: feature:3071771-3086559:-1:exon
subclass of: SO_0000010

117868633
type: Gene
SIO_000068: ncbigene

position:3071771:-1
position: 3071771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3086559:-1
position: 3086559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3071771-3086559:-1:exon

CHEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CHEK1
product: checkpoint kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_034754760.1
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(3071771..3073009,3074679..3074780,3075007..3075138,3075325..3075502,3076224..3076332,3077379..3077474,3078613..3078717,3080082..3080270,3081224..3081293,3081388..3081452,3084283..3084506,3086317..3086559))
location: region:3071771-3086559:-1
so has part: feature:3086317-3086559:-1:exon
so has part: feature:3084283-3084506:-1:exon
so has part: feature:3081388-3081452:-1:exon
so has part: feature:3081224-3081293:-1:exon
so has part: feature:3080082-3080270:-1:exon
so has part: feature:3078613-3078717:-1:exon
so has part: feature:3077379-3077474:-1:exon
so has part: feature:3076224-3076332:-1:exon
so has part: feature:3075325-3075502:-1:exon
so has part: feature:3075007-3075138:-1:exon
so has part: feature:3074679-3074780:-1:exon
so has part: feature:3071771-3073009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3086317-3086559:-1:exon

position:3086317:-1
position: 3086317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3084283-3084506:-1:exon

position:3084283:-1
position: 3084283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3084506:-1
position: 3084506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3081388-3081452:-1:exon

position:3081388:-1
position: 3081388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3081452:-1
position: 3081452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3081224-3081293:-1:exon

position:3081224:-1
position: 3081224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3081293:-1
position: 3081293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3080082-3080270:-1:exon

position:3080082:-1
position: 3080082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3080270:-1
position: 3080270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3078613-3078717:-1:exon

position:3078613:-1
position: 3078613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3078717:-1
position: 3078717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3077379-3077474:-1:exon

position:3077379:-1
position: 3077379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3077474:-1
position: 3077474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3076224-3076332:-1:exon

position:3076224:-1
position: 3076224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3076332:-1
position: 3076332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3075325-3075502:-1:exon

position:3075325:-1
position: 3075325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3075502:-1
position: 3075502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3075007-3075138:-1:exon

position:3075007:-1
position: 3075007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3075138:-1
position: 3075138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3074679-3074780:-1:exon

position:3074679:-1
position: 3074679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3074780:-1
position: 3074780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3071771-3073009:-1:exon

position:3073009:-1
position: 3073009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CHEK1
product: checkpoint kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034754762.1
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(3071771..3073009,3074679..3074780,3075007..3075138,3075325..3075502,3076224..3076332,3077379..3077474,3078613..3078717,3080082..3080270,3081224..3081293,3081388..3081452,3084283..3084506,3085900..3085973))
location: region:3071771-3085973:-1
so has part: feature:3085900-3085973:-1:exon
so has part: feature:3084283-3084506:-1:exon
so has part: feature:3081388-3081452:-1:exon
so has part: feature:3081224-3081293:-1:exon
so has part: feature:3080082-3080270:-1:exon
so has part: feature:3078613-3078717:-1:exon
so has part: feature:3077379-3077474:-1:exon
so has part: feature:3076224-3076332:-1:exon
so has part: feature:3075325-3075502:-1:exon
so has part: feature:3075007-3075138:-1:exon
so has part: feature:3074679-3074780:-1:exon
so has part: feature:3071771-3073009:-1:exon

position:3085973:-1
position: 3085973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3085900-3085973:-1:exon

position:3085900:-1
position: 3085900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3084283-3084506:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3081388-3081452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3081224-3081293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3080082-3080270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3078613-3078717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3077379-3077474:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3076224-3076332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3075325-3075502:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3075007-3075138:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3074679-3074780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3071771-3073009:-1:exon

CHEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CHEK1
product: checkpoint kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034754761.1
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(3071771..3073009,3074679..3074780,3075007..3075138,3075325..3075502,3076224..3076332,3077379..3077474,3078613..3078717,3080082..3080270,3081224..3081293,3081388..3081452,3084283..3084506,3085707..3085854))
location: region:3071771-3085854:-1
so has part: feature:3085707-3085854:-1:exon
so has part: feature:3084283-3084506:-1:exon
so has part: feature:3081388-3081452:-1:exon
so has part: feature:3081224-3081293:-1:exon
so has part: feature:3080082-3080270:-1:exon
so has part: feature:3078613-3078717:-1:exon
so has part: feature:3077379-3077474:-1:exon
so has part: feature:3076224-3076332:-1:exon
so has part: feature:3075325-3075502:-1:exon
so has part: feature:3075007-3075138:-1:exon
so has part: feature:3074679-3074780:-1:exon
so has part: feature:3071771-3073009:-1:exon

position:3085854:-1
position: 3085854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3085707-3085854:-1:exon

position:3085707:-1
position: 3085707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3084283-3084506:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3081388-3081452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3081224-3081293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3080082-3080270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3078613-3078717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3077379-3077474:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3076224-3076332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3075325-3075502:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3075007-3075138:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3074679-3074780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3071771-3073009:-1:exon

CHEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CHEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Chk1 isoform X1
translation: MAVPFVEDWDLVQTLGEGAYGEVQLAVNRRTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENIVKFYGHRREGSIQYLFLEYCSGGELFDRIEPDIGMPEPDAQKFFHQLMAGVVYLHSIGITHRDIKPENLLLDERDNLKISDFGLATVFKHNGRERLLNKMCGTLPYVAPELLKRKEFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYCDWKEKKTYLPPWKKIDSAPLALLHKILTESPTARVTIADIKKDRWYNKPMKKGVKRARVSSGGLSDSPGGFSKHIRSDMDFSPMKSAHSEEKVSYSTSQPEPRTGISLWDSSPTNINKLVQGISFSQPACPEHMLVNSQLLGTPGSSQNPWQRLVKRMTRFFTKLDADRSYNSLKEVCEKMGYVWKKSCTNQVTISTTDRRNNKLIFKVNLVEMEDKILVDFRLSKGDGLEFKRHFLKIKGKLNDIVSTQKVWLPAT
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(3072914..3073009,3074679..3074780,3075007..3075138,3075325..3075502,3076224..3076332,3077379..3077474,3078613..3078717,3080082..3080270,3081224..3081293,3081388..3081452,3084283..3084506,3086317..3086381))
location: region:3072914-3086381:-1
so has part: feature:3086317-3086381:-1:exon
so has part: feature:3084283-3084506:-1:exon
so has part: feature:3081388-3081452:-1:exon
so has part: feature:3081224-3081293:-1:exon
so has part: feature:3080082-3080270:-1:exon
so has part: feature:3078613-3078717:-1:exon
so has part: feature:3077379-3077474:-1:exon
so has part: feature:3076224-3076332:-1:exon
so has part: feature:3075325-3075502:-1:exon
so has part: feature:3075007-3075138:-1:exon
so has part: feature:3074679-3074780:-1:exon
so has part: feature:3072914-3073009:-1:exon

XP_034610651.1
type: Protein
SIO_000068: ncbiprotein

position:3072914:-1
position: 3072914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3086381:-1
position: 3086381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3086317-3086381:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3084283-3084506:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3081388-3081452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3081224-3081293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3080082-3080270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3078613-3078717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3077379-3077474:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3076224-3076332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3075325-3075502:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3075007-3075138:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3074679-3074780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3072914-3073009:-1:exon

CHEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CHEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Chk1 isoform X2
translation: MKRAVDCPENIKKEICINKMLNHENIVKFYGHRREGSIQYLFLEYCSGGELFDRIEPDIGMPEPDAQKFFHQLMAGVVYLHSIGITHRDIKPENLLLDERDNLKISDFGLATVFKHNGRERLLNKMCGTLPYVAPELLKRKEFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYCDWKEKKTYLPPWKKIDSAPLALLHKILTESPTARVTIADIKKDRWYNKPMKKGVKRARVSSGGLSDSPGGFSKHIRSDMDFSPMKSAHSEEKVSYSTSQPEPRTGISLWDSSPTNINKLVQGISFSQPACPEHMLVNSQLLGTPGSSQNPWQRLVKRMTRFFTKLDADRSYNSLKEVCEKMGYVWKKSCTNQVTISTTDRRNNKLIFKVNLVEMEDKILVDFRLSKGDGLEFKRHFLKIKGKLNDIVSTQKVWLPAT
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(3072914..3073009,3074679..3074780,3075007..3075138,3075325..3075502,3076224..3076332,3077379..3077474,3078613..3078717,3080082..3080270,3081224..3081293,3081388..3081452,3084283..3084448))
location: region:3072914-3084448:-1
so has part: feature:3084283-3084448:-1:exon
so has part: feature:3081388-3081452:-1:exon
so has part: feature:3081224-3081293:-1:exon
so has part: feature:3080082-3080270:-1:exon
so has part: feature:3078613-3078717:-1:exon
so has part: feature:3077379-3077474:-1:exon
so has part: feature:3076224-3076332:-1:exon
so has part: feature:3075325-3075502:-1:exon
so has part: feature:3075007-3075138:-1:exon
so has part: feature:3074679-3074780:-1:exon
so has part: feature:3072914-3073009:-1:exon

XP_034610652.1
type: Protein
SIO_000068: ncbiprotein

position:3084448:-1
position: 3084448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3084283-3084448:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3081388-3081452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3081224-3081293:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3080082-3080270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3078613-3078717:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3077379-3077474:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3076224-3076332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3075325-3075502:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3075007-3075138:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3074679-3074780:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3072914-3073009:-1:exon

CHEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CHEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Chk1 isoform X2
translation: MKRAVDCPENIKKEICINKMLNHENIVKFYGHRREGSIQYLFLEYCSGGELFDRIEPDIGMPEPDAQKFFHQLMAGVVYLHSIGITHRDIKPENLLLDERDNLKISDFGLATVFKHNGRERLLNKMCGTLPYVAPELLKRKEFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYCDWKEKKTYLPPWKKIDSAPLALLHKILTESPTARVTIADIKKDRWYNKPMKKGVKRARVSSGGLSDSPGGFSKHIRSDMDFSPMKSAHSEEKVSYSTSQPEPRTGISLWDSSPTNINKLVQGISFSQPACPEHMLVNSQLLGTPGSSQNPWQRLVKRMTRFFTKLDADRSYNSLKEVCEKMGYVWKKSCTNQVTISTTDRRNNKLIFKVNLVEMEDKILVDFRLSKGDGLEFKRHFLKIKGKLNDIVSTQKVWLPAT
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(3072914..3073009,3074679..3074780,3075007..3075138,3075325..3075502,3076224..3076332,3077379..3077474,3078613..3078717,3080082..3080270,3081224..3081293,3081388..3081452,3084283..3084448))
location: region:3072914-3084448:-1
so has part: feature:3084283-3084448:-1:exon
so has part: feature:3081388-3081452:-1:exon
so has part: feature:3081224-3081293:-1:exon
so has part: feature:3080082-3080270:-1:exon
so has part: feature:3078613-3078717:-1:exon
so has part: feature:3077379-3077474:-1:exon
so has part: feature:3076224-3076332:-1:exon
so has part: feature:3075325-3075502:-1:exon
so has part: feature:3075007-3075138:-1:exon
so has part: feature:3074679-3074780:-1:exon
so has part: feature:3072914-3073009:-1:exon

XP_034610653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3084283-3084448:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3081388-3081452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3081224-3081293:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3080082-3080270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3078613-3078717:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3077379-3077474:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3076224-3076332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3075325-3075502:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3075007-3075138:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3074679-3074780:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3072914-3073009:-1:exon

STT3A
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: STT3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3090373..3116929)
location: region:3090373-3116929:-1
so has part: feature:3090373-3116929:-1:exon
subclass of: SO_0000010

117868566
type: Gene
SIO_000068: ncbigene

position:3090373:-1
position: 3090373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3116929:-1
position: 3116929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3090373-3116929:-1:exon

STT3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: STT3A
product: STT3 oligosaccharyltransferase complex catalytic subunit A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_034754630.1
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: complement(join(3090373..3090643,3092495..3092610,3093369..3093557,3095039..3095141,3095373..3095489,3097986..3098174,3098506..3098661,3099548..3099639,3100854..3101009,3101773..3101953,3103067..3103231,3105632..3105738,3106989..3107079,3108541..3108686,3109770..3109891,3110959..3111019,3111364..3111489,3111965..3112047,3116853..3116929))
location: region:3090373-3116929:-1
so has part: feature:3116853-3116929:-1:exon
so has part: feature:3111965-3112047:-1:exon
so has part: feature:3111364-3111489:-1:exon
so has part: feature:3110959-3111019:-1:exon
so has part: feature:3109770-3109891:-1:exon
so has part: feature:3108541-3108686:-1:exon
so has part: feature:3106989-3107079:-1:exon
so has part: feature:3105632-3105738:-1:exon
so has part: feature:3103067-3103231:-1:exon
so has part: feature:3101773-3101953:-1:exon
so has part: feature:3100854-3101009:-1:exon
so has part: feature:3099548-3099639:-1:exon
so has part: feature:3098506-3098661:-1:exon
so has part: feature:3097986-3098174:-1:exon
so has part: feature:3095373-3095489:-1:exon
so has part: feature:3095039-3095141:-1:exon
so has part: feature:3093369-3093557:-1:exon
so has part: feature:3092495-3092610:-1:exon
so has part: feature:3090373-3090643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3116853-3116929:-1:exon

position:3116853:-1
position: 3116853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3111965-3112047:-1:exon

position:3111965:-1
position: 3111965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3112047:-1
position: 3112047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3111364-3111489:-1:exon

position:3111364:-1
position: 3111364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3111489:-1
position: 3111489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3110959-3111019:-1:exon

position:3110959:-1
position: 3110959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3111019:-1
position: 3111019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3109770-3109891:-1:exon

position:3109770:-1
position: 3109770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3109891:-1
position: 3109891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3108541-3108686:-1:exon

position:3108541:-1
position: 3108541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3108686:-1
position: 3108686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3106989-3107079:-1:exon

position:3106989:-1
position: 3106989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3107079:-1
position: 3107079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3105632-3105738:-1:exon

position:3105632:-1
position: 3105632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3105738:-1
position: 3105738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3103067-3103231:-1:exon

position:3103067:-1
position: 3103067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3103231:-1
position: 3103231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3101773-3101953:-1:exon

position:3101773:-1
position: 3101773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3101953:-1
position: 3101953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3100854-3101009:-1:exon

position:3100854:-1
position: 3100854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3101009:-1
position: 3101009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3099548-3099639:-1:exon

position:3099548:-1
position: 3099548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3099639:-1
position: 3099639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3098506-3098661:-1:exon

position:3098506:-1
position: 3098506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3098661:-1
position: 3098661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3097986-3098174:-1:exon

position:3097986:-1
position: 3097986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3098174:-1
position: 3098174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3095373-3095489:-1:exon

position:3095373:-1
position: 3095373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3095489:-1
position: 3095489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3095039-3095141:-1:exon

position:3095039:-1
position: 3095039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3095141:-1
position: 3095141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3093369-3093557:-1:exon

position:3093369:-1
position: 3093369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3093557:-1
position: 3093557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3092495-3092610:-1:exon

position:3092495:-1
position: 3092495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3092610:-1
position: 3092610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3090373-3090643:-1:exon

position:3090643:-1
position: 3090643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STT3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: STT3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
translation: MTKLGFLRLSYEKQDTLLKLLILSMAAVLSFSTRLFSVLRFESVIHEFDPYFNYRTTRFLAEEGFYKFHNWFDDRAWYPLGRIIGGTIYPGLMITSAAIYHVLHFFHITIDIRNVCVFLAPLFSSFTTIVTYHLTKELKDAGAGLLAAAMIAVVPGYISRSVAGSYDNEGIAIFCMLLTYYMWIKAVKTGSIYWAAMCALAYFYMVSSWGGYVFLINLIPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAALGVFGLCQIHAFVDYLRSKLNPQQFEILFRSVISLVGFVLLTIGAVLMLTGKISPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSSYYFDLQLLVFMFPVGLYYCFSNLSDARIFIIMYGVTSMYFSAVMVRLMLVLAPVMCILSGIGVSQVLSTYMKNLDISRPDKKTKKQQDSTYPIKNEVASGMILVMAFFLITYTFHSTWVTSEAYSSPSIVLSARGGDGSRIIFDDFREAYYWLRHNTPEDAKVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVGQAMASTEEKAYEIMRELDVSYVLVIFGGLTGYSSDDINKFLWMVRIGGSTDTGKHIKEHDYYTPTGEFRVDREGSPVLLNCLMYKMCYYRFGQVYTEAKRPPGYDRVRNAEIGNKDFELDVLEEAYTTEHWLVRIYKVKDLDNRGLSRT
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: complement(join(3090605..3090643,3092495..3092610,3093369..3093557,3095039..3095141,3095373..3095489,3097986..3098174,3098506..3098661,3099548..3099639,3100854..3101009,3101773..3101953,3103067..3103231,3105632..3105738,3106989..3107079,3108541..3108686,3109770..3109891,3110959..3111019,3111364..3111451))
location: region:3090605-3111451:-1
so has part: feature:3111364-3111451:-1:exon
so has part: feature:3110959-3111019:-1:exon
so has part: feature:3109770-3109891:-1:exon
so has part: feature:3108541-3108686:-1:exon
so has part: feature:3106989-3107079:-1:exon
so has part: feature:3105632-3105738:-1:exon
so has part: feature:3103067-3103231:-1:exon
so has part: feature:3101773-3101953:-1:exon
so has part: feature:3100854-3101009:-1:exon
so has part: feature:3099548-3099639:-1:exon
so has part: feature:3098506-3098661:-1:exon
so has part: feature:3097986-3098174:-1:exon
so has part: feature:3095373-3095489:-1:exon
so has part: feature:3095039-3095141:-1:exon
so has part: feature:3093369-3093557:-1:exon
so has part: feature:3092495-3092610:-1:exon
so has part: feature:3090605-3090643:-1:exon

XP_034610521.1
type: Protein
SIO_000068: ncbiprotein

position:3090605:-1
position: 3090605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3111451:-1
position: 3111451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3111364-3111451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3110959-3111019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3109770-3109891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3108541-3108686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3106989-3107079:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3105632-3105738:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3103067-3103231:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3101773-3101953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3100854-3101009:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3099548-3099639:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3098506-3098661:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3097986-3098174:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3095373-3095489:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3095039-3095141:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3093369-3093557:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3092495-3092610:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3090605-3090643:-1:exon

EI24
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: EI24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3123136..3158944)
location: region:3123136-3158944:-1
so has part: feature:3123136-3158944:-1:exon
subclass of: SO_0000010

117868565
type: Gene
SIO_000068: ncbigene

position:3123136:-1
position: 3123136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3158944:-1
position: 3158944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3123136-3158944:-1:exon

EI24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: EI24
product: EI24 autophagy associated transmembrane protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_034754625.1
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: complement(join(3123136..3124803,3125500..3125574,3126864..3126975,3129493..3129604,3130051..3130170,3131886..3132010,3134928..3134994,3135956..3136016,3143723..3143868,3145544..3145691,3158788..3158944))
location: region:3123136-3158944:-1
so has part: feature:3158788-3158944:-1:exon
so has part: feature:3145544-3145691:-1:exon
so has part: feature:3143723-3143868:-1:exon
so has part: feature:3135956-3136016:-1:exon
so has part: feature:3134928-3134994:-1:exon
so has part: feature:3131886-3132010:-1:exon
so has part: feature:3130051-3130170:-1:exon
so has part: feature:3129493-3129604:-1:exon
so has part: feature:3126864-3126975:-1:exon
so has part: feature:3125500-3125574:-1:exon
so has part: feature:3123136-3124803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3158788-3158944:-1:exon

position:3158788:-1
position: 3158788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3145544-3145691:-1:exon

position:3145544:-1
position: 3145544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3145691:-1
position: 3145691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3143723-3143868:-1:exon

position:3143723:-1
position: 3143723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3143868:-1
position: 3143868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3135956-3136016:-1:exon

position:3135956:-1
position: 3135956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3136016:-1
position: 3136016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3134928-3134994:-1:exon

position:3134928:-1
position: 3134928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3134994:-1
position: 3134994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3131886-3132010:-1:exon

position:3131886:-1
position: 3131886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3132010:-1
position: 3132010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3130051-3130170:-1:exon

position:3130051:-1
position: 3130051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3130170:-1
position: 3130170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3129493-3129604:-1:exon

position:3129493:-1
position: 3129493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3129604:-1
position: 3129604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3126864-3126975:-1:exon

position:3126864:-1
position: 3126864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3126975:-1
position: 3126975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3125500-3125574:-1:exon

position:3125500:-1
position: 3125500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3125574:-1
position: 3125574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3123136-3124803:-1:exon

position:3124803:-1
position: 3124803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EI24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: EI24
product: EI24 autophagy associated transmembrane protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_034754627.1
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: complement(join(3123136..3124803,3125500..3125574,3126864..3126975,3129493..3129604,3130051..3130170,3131886..3132010,3134928..3134994,3135956..3136016,3143723..3143868,3145544..3145691,3154278..3154415))
location: region:3123136-3154415:-1
so has part: feature:3154278-3154415:-1:exon
so has part: feature:3145544-3145691:-1:exon
so has part: feature:3143723-3143868:-1:exon
so has part: feature:3135956-3136016:-1:exon
so has part: feature:3134928-3134994:-1:exon
so has part: feature:3131886-3132010:-1:exon
so has part: feature:3130051-3130170:-1:exon
so has part: feature:3129493-3129604:-1:exon
so has part: feature:3126864-3126975:-1:exon
so has part: feature:3125500-3125574:-1:exon
so has part: feature:3123136-3124803:-1:exon

position:3154415:-1
position: 3154415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3154278-3154415:-1:exon

position:3154278:-1
position: 3154278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3145544-3145691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3143723-3143868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3135956-3136016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3134928-3134994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3131886-3132010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3130051-3130170:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3129493-3129604:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3126864-3126975:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3125500-3125574:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3123136-3124803:-1:exon

EI24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: EI24
product: EI24 autophagy associated transmembrane protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034754628.1
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: complement(join(3123136..3124803,3125500..3125574,3126864..3126975,3129493..3129604,3130051..3130170,3131886..3132010,3134928..3134994,3135956..3136016,3143723..3143868,3145544..3145691,3147097..3147183))
location: region:3123136-3147183:-1
so has part: feature:3147097-3147183:-1:exon
so has part: feature:3145544-3145691:-1:exon
so has part: feature:3143723-3143868:-1:exon
so has part: feature:3135956-3136016:-1:exon
so has part: feature:3134928-3134994:-1:exon
so has part: feature:3131886-3132010:-1:exon
so has part: feature:3130051-3130170:-1:exon
so has part: feature:3129493-3129604:-1:exon
so has part: feature:3126864-3126975:-1:exon
so has part: feature:3125500-3125574:-1:exon
so has part: feature:3123136-3124803:-1:exon

position:3147183:-1
position: 3147183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3147097-3147183:-1:exon

position:3147097:-1
position: 3147097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3145544-3145691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3143723-3143868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3135956-3136016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3134928-3134994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3131886-3132010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3130051-3130170:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3129493-3129604:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3126864-3126975:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3125500-3125574:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3123136-3124803:-1:exon

EI24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: EI24
product: EI24 autophagy associated transmembrane protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034754629.1
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: complement(join(3123136..3124803,3125500..3125574,3126864..3126975,3129493..3129604,3130051..3130170,3131886..3132010,3134928..3134994,3135956..3136016,3136754..3136872))
location: region:3123136-3136872:-1
so has part: feature:3136754-3136872:-1:exon
so has part: feature:3135956-3136016:-1:exon
so has part: feature:3134928-3134994:-1:exon
so has part: feature:3131886-3132010:-1:exon
so has part: feature:3130051-3130170:-1:exon
so has part: feature:3129493-3129604:-1:exon
so has part: feature:3126864-3126975:-1:exon
so has part: feature:3125500-3125574:-1:exon
so has part: feature:3123136-3124803:-1:exon

position:3136872:-1
position: 3136872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3136754-3136872:-1:exon

position:3136754:-1
position: 3136754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3135956-3136016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3134928-3134994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3131886-3132010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3130051-3130170:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3129493-3129604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3126864-3126975:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3125500-3125574:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3123136-3124803:-1:exon

EI24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: EI24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: etoposide-induced protein 2.4 homolog isoform X1
translation: MADSVKTFLHDLVRGIKDSIWGICTISKLDARIQQKREEQRKRRASSVLAQRRAQSEERKLENEPRIVSRIFQCCAWNGGVFWLSLLLFYRVFIPVLQSVTAQIIGDPSLHGDVWSWLEFILTSIFGALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPQPFSSVSKIIADMLFNLLLQALFLIQGMIVSLFPIDIIGQLVSLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISANEAKTPGKAYHFQLRLFSLVVFLSNRLFHKTVYLQSTLSSSSSVDRLPSPHSSPAKQKAALRH
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: complement(join(3124641..3124803,3125500..3125574,3126864..3126975,3129493..3129604,3130051..3130170,3131886..3132010,3134928..3134994,3135956..3136016,3143723..3143868,3145544..3145585))
location: region:3124641-3145585:-1
so has part: feature:3145544-3145585:-1:exon
so has part: feature:3143723-3143868:-1:exon
so has part: feature:3135956-3136016:-1:exon
so has part: feature:3134928-3134994:-1:exon
so has part: feature:3131886-3132010:-1:exon
so has part: feature:3130051-3130170:-1:exon
so has part: feature:3129493-3129604:-1:exon
so has part: feature:3126864-3126975:-1:exon
so has part: feature:3125500-3125574:-1:exon
so has part: feature:3124641-3124803:-1:exon

XP_034610516.1
type: Protein
SIO_000068: ncbiprotein

position:3124641:-1
position: 3124641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3145585:-1
position: 3145585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3145544-3145585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3143723-3143868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3135956-3136016:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3134928-3134994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3131886-3132010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3130051-3130170:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3129493-3129604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3126864-3126975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3125500-3125574:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3124641-3124803:-1:exon

EI24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: EI24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: etoposide-induced protein 2.4 homolog isoform X1
translation: MADSVKTFLHDLVRGIKDSIWGICTISKLDARIQQKREEQRKRRASSVLAQRRAQSEERKLENEPRIVSRIFQCCAWNGGVFWLSLLLFYRVFIPVLQSVTAQIIGDPSLHGDVWSWLEFILTSIFGALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPQPFSSVSKIIADMLFNLLLQALFLIQGMIVSLFPIDIIGQLVSLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISANEAKTPGKAYHFQLRLFSLVVFLSNRLFHKTVYLQSTLSSSSSVDRLPSPHSSPAKQKAALRH
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: complement(join(3124641..3124803,3125500..3125574,3126864..3126975,3129493..3129604,3130051..3130170,3131886..3132010,3134928..3134994,3135956..3136016,3143723..3143868,3145544..3145585))
location: region:3124641-3145585:-1
so has part: feature:3145544-3145585:-1:exon
so has part: feature:3143723-3143868:-1:exon
so has part: feature:3135956-3136016:-1:exon
so has part: feature:3134928-3134994:-1:exon
so has part: feature:3131886-3132010:-1:exon
so has part: feature:3130051-3130170:-1:exon
so has part: feature:3129493-3129604:-1:exon
so has part: feature:3126864-3126975:-1:exon
so has part: feature:3125500-3125574:-1:exon
so has part: feature:3124641-3124803:-1:exon

XP_034610518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3145544-3145585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3143723-3143868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3135956-3136016:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3134928-3134994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3131886-3132010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3130051-3130170:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3129493-3129604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3126864-3126975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3125500-3125574:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3124641-3124803:-1:exon

EI24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: EI24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: etoposide-induced protein 2.4 homolog isoform X1
translation: MADSVKTFLHDLVRGIKDSIWGICTISKLDARIQQKREEQRKRRASSVLAQRRAQSEERKLENEPRIVSRIFQCCAWNGGVFWLSLLLFYRVFIPVLQSVTAQIIGDPSLHGDVWSWLEFILTSIFGALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPQPFSSVSKIIADMLFNLLLQALFLIQGMIVSLFPIDIIGQLVSLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISANEAKTPGKAYHFQLRLFSLVVFLSNRLFHKTVYLQSTLSSSSSVDRLPSPHSSPAKQKAALRH
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: complement(join(3124641..3124803,3125500..3125574,3126864..3126975,3129493..3129604,3130051..3130170,3131886..3132010,3134928..3134994,3135956..3136016,3143723..3143868,3145544..3145585))
location: region:3124641-3145585:-1
so has part: feature:3145544-3145585:-1:exon
so has part: feature:3143723-3143868:-1:exon
so has part: feature:3135956-3136016:-1:exon
so has part: feature:3134928-3134994:-1:exon
so has part: feature:3131886-3132010:-1:exon
so has part: feature:3130051-3130170:-1:exon
so has part: feature:3129493-3129604:-1:exon
so has part: feature:3126864-3126975:-1:exon
so has part: feature:3125500-3125574:-1:exon
so has part: feature:3124641-3124803:-1:exon

XP_034610519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3145544-3145585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3143723-3143868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3135956-3136016:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3134928-3134994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3131886-3132010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3130051-3130170:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3129493-3129604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3126864-3126975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3125500-3125574:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3124641-3124803:-1:exon

EI24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: EI24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: etoposide-induced protein 2.4 homolog isoform X2
translation: MEELWRGTNGRRPCTLITVERLQIHEPRIVSRIFQCCAWNGGVFWLSLLLFYRVFIPVLQSVTAQIIGDPSLHGDVWSWLEFILTSIFGALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPQPFSSVSKIIADMLFNLLLQALFLIQGMIVSLFPIDIIGQLVSLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISANEAKTPGKAYHFQLRLFSLVVFLSNRLFHKTVYLQSTLSSSSSVDRLPSPHSSPAKQKAALRH
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: complement(join(3124641..3124803,3125500..3125574,3126864..3126975,3129493..3129604,3130051..3130170,3131886..3132010,3134928..3134994,3135956..3136016,3136754..3136827))
location: region:3124641-3136827:-1
so has part: feature:3136754-3136827:-1:exon
so has part: feature:3135956-3136016:-1:exon
so has part: feature:3134928-3134994:-1:exon
so has part: feature:3131886-3132010:-1:exon
so has part: feature:3130051-3130170:-1:exon
so has part: feature:3129493-3129604:-1:exon
so has part: feature:3126864-3126975:-1:exon
so has part: feature:3125500-3125574:-1:exon
so has part: feature:3124641-3124803:-1:exon

XP_034610520.1
type: Protein
SIO_000068: ncbiprotein

position:3136827:-1
position: 3136827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3136754-3136827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3135956-3136016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3134928-3134994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3131886-3132010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3130051-3130170:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3129493-3129604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3126864-3126975:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3125500-3125574:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3124641-3124803:-1:exon

LOC117868697
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3170917..3175038)
location: region:3170917-3175038:-1
so has part: feature:3170917-3175038:-1:exon

117868697
type: Gene
SIO_000068: ncbigene

position:3170917:-1
position: 3170917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3175038:-1
position: 3175038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3170917-3175038:-1:exon

LOC117868697
type: Exon
subclass of: SO_0000147
RO_0002162: 31138
gene: LOC117868697
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
pseudo: true
SIO_010081: LOC117868697
subclass of: SO_0000673
so part of: LOC117868697
location: complement(3170917..3171631)
location: region:3170917-3171631:-1
so has part: feature:3170917-3171631:-1:exon

position:3171631:-1
position: 3171631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3170917-3171631:-1:exon

LOC117868697
type: Exon
subclass of: SO_0000147
RO_0002162: 31138
gene: LOC117868697
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
pseudo: true
SIO_010081: LOC117868697
subclass of: SO_0000673
so part of: LOC117868697
location: complement(3174975..3175038)
location: region:3174975-3175038:-1
so has part: feature:3174975-3175038:-1:exon

position:3174975:-1
position: 3174975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3174975-3175038:-1:exon

LOC117868544
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3186575..3191272
location: region:3186575-3191272:1
so has part: feature:3186575-3191272:1:exon
subclass of: SO_0000010

117868544
type: Gene
SIO_000068: ncbigene

position:3186575:1
position: 3186575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3191272:1
position: 3191272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3186575-3191272:1:exon

LOC117868544
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868544
product: gastrokine-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 29% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034754598.1
SIO_010081: LOC117868544
subclass of: SO_0000673
so part of: LOC117868544
location: join(3186575..3186955,3189675..3189791,3190028..3190147,3191198..3191272)
location: region:3186575-3191272:1
so has part: feature:3186575-3186955:1:exon
so has part: feature:3189675-3189791:1:exon
so has part: feature:3190028-3190147:1:exon
so has part: feature:3191198-3191272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3186575-3186955:1:exon

position:3186955:1
position: 3186955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3189675-3189791:1:exon

position:3189675:1
position: 3189675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3189791:1
position: 3189791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3190028-3190147:1:exon

position:3190028:1
position: 3190028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3190147:1
position: 3190147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3191198-3191272:1:exon

position:3191198:1
position: 3191198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117868544
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrokine-2-like
translation: MPIAVLLGSSVQFTPLRLCPAGKCQPAACDGGRITKGHCHSQLTGLLSSNCLYTESLSMQTASEAAESNENILPCVMCLLQIIQITSSGSNGEVTEQTMMVSSQENVAAFHIEGNTTSATVVYDYKHSLIGFRVQDRRKCLVVKMDKVAIPSLAEITQRIENFATQQVPGDNSMSYSFRERQLANRTTLGTSLNLLCSDVPIYWAENMQKERRGWSLCVGIYVFSVCYNF
SIO_010081: LOC117868544
subclass of: SO_0000673
so part of: LOC117868544
location: join(3186575..3186955,3189675..3189791,3190028..3190147,3191198..3191272)
location: region:3186575-3191272:1
so has part: feature:3186575-3186955:1:exon
so has part: feature:3189675-3189791:1:exon
so has part: feature:3190028-3190147:1:exon
so has part: feature:3191198-3191272:1:exon

XP_034610489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3186575-3186955:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3189675-3189791:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3190028-3190147:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3191198-3191272:1:exon

LOC117868657
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868657
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3206019..3214257
location: region:3206019-3214257:1
so has part: feature:3206019-3214257:1:exon
subclass of: SO_0000010

117868657
type: Gene
SIO_000068: ncbigene

position:3206019:1
position: 3206019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3214257:1
position: 3214257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3206019-3214257:1:exon

LOC117868657
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868657
product: pulmonary surfactant-associated protein C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034754791.1
SIO_010081: LOC117868657
subclass of: SO_0000673
so part of: LOC117868657
location: join(3206019..3206116,3207337..3207474,3208841..3208978,3210650..3210766,3212512..3212631,3214119..3214257)
location: region:3206019-3214257:1
so has part: feature:3206019-3206116:1:exon
so has part: feature:3207337-3207474:1:exon
so has part: feature:3208841-3208978:1:exon
so has part: feature:3210650-3210766:1:exon
so has part: feature:3212512-3212631:1:exon
so has part: feature:3214119-3214257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3206019-3206116:1:exon

position:3206116:1
position: 3206116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3207337-3207474:1:exon

position:3207337:1
position: 3207337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3207474:1
position: 3207474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3208841-3208978:1:exon

position:3208841:1
position: 3208841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3208978:1
position: 3208978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3210650-3210766:1:exon

position:3210650:1
position: 3210650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3210766:1
position: 3210766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3212512-3212631:1:exon

position:3212512:1
position: 3212512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3212631:1
position: 3212631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3214119-3214257:1:exon

position:3214119:1
position: 3214119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117868657
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868657
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pulmonary surfactant-associated protein C-like
translation: MDCKSTTELTMPAQPPVYSSMPKVSTNQQRIILASVMVILLGFFIVAGALVGVYLTQKHTEKVLDMVIQGNKGEEEEQTAMVNERENVAAFHIKRKKSTATVVYNYNQGLIGLRITNSKKCFVMKMDKLNIPSLDEISRDLPHFNAKQVSGDNMSYNFTEAEPADRTTLGTTLNILCSDIPIYWALPRKIQGNRSSSAPLGSPWCFFSSLCLCF
SIO_010081: LOC117868657
subclass of: SO_0000673
so part of: LOC117868657
location: join(3206069..3206116,3207337..3207474,3208841..3208978,3210650..3210766,3212512..3212631,3214119..3214202)
location: region:3206069-3214202:1
so has part: feature:3206069-3206116:1:exon
so has part: feature:3207337-3207474:1:exon
so has part: feature:3208841-3208978:1:exon
so has part: feature:3210650-3210766:1:exon
so has part: feature:3212512-3212631:1:exon
so has part: feature:3214119-3214202:1:exon

XP_034610682.1
type: Protein
SIO_000068: ncbiprotein

position:3206069:1
position: 3206069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3214202:1
position: 3214202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3206069-3206116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3207337-3207474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3208841-3208978:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3210650-3210766:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3212512-3212631:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3214119-3214202:1:exon

FAM118B
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3217584..3242830
location: region:3217584-3242830:1
so has part: feature:3217584-3242830:1:exon
subclass of: SO_0000010

117868463
type: Gene
SIO_000068: ncbigene

position:3217584:1
position: 3217584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3242830:1
position: 3242830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3217584-3242830:1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_034754380.1
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(3217584..3217846,3223159..3223293,3228636..3228709,3231844..3231924,3234663..3234915,3236015..3236242,3239945..3240230,3241871..3241927,3242351..3242830)
location: region:3217584-3242830:1
so has part: feature:3217584-3217846:1:exon
so has part: feature:3223159-3223293:1:exon
so has part: feature:3228636-3228709:1:exon
so has part: feature:3231844-3231924:1:exon
so has part: feature:3234663-3234915:1:exon
so has part: feature:3236015-3236242:1:exon
so has part: feature:3239945-3240230:1:exon
so has part: feature:3241871-3241927:1:exon
so has part: feature:3242351-3242830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3217584-3217846:1:exon

position:3217846:1
position: 3217846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3223159-3223293:1:exon

position:3223159:1
position: 3223159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3223293:1
position: 3223293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3228636-3228709:1:exon

position:3228636:1
position: 3228636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3228709:1
position: 3228709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3231844-3231924:1:exon

position:3231844:1
position: 3231844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3231924:1
position: 3231924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3234663-3234915:1:exon

position:3234663:1
position: 3234663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3234915:1
position: 3234915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3236015-3236242:1:exon

position:3236015:1
position: 3236015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3236242:1
position: 3236242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3239945-3240230:1:exon

position:3239945:1
position: 3239945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3240230:1
position: 3240230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3241871-3241927:1:exon

position:3241871:1
position: 3241871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3241927:1
position: 3241927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3242351-3242830:1:exon

position:3242351:1
position: 3242351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_034754378.1
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(3217597..3217846,3223159..3223293,3228636..3228709,3231844..3231924,3234663..3234915,3236015..3236242,3238396..3238524,3239945..3240230,3241871..3241927,3242351..3242830)
location: region:3217597-3242830:1
so has part: feature:3217597-3217846:1:exon
so has part: feature:3223159-3223293:1:exon
so has part: feature:3228636-3228709:1:exon
so has part: feature:3231844-3231924:1:exon
so has part: feature:3234663-3234915:1:exon
so has part: feature:3236015-3236242:1:exon
so has part: feature:3238396-3238524:1:exon
so has part: feature:3239945-3240230:1:exon
so has part: feature:3241871-3241927:1:exon
so has part: feature:3242351-3242830:1:exon

position:3217597:1
position: 3217597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3217597-3217846:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3223159-3223293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3228636-3228709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3231844-3231924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3234663-3234915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3236015-3236242:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3238396-3238524:1:exon

position:3238396:1
position: 3238396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3238524:1
position: 3238524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3239945-3240230:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3241871-3241927:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3242351-3242830:1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_034754379.1
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(3217597..3217846,3223241..3223293,3228636..3228709,3231844..3231924,3234663..3234915,3236015..3236242,3238396..3238524,3239945..3240230,3241871..3241927,3242351..3242830)
location: region:3217597-3242830:1
so has part: feature:3217597-3217846:1:exon
so has part: feature:3223241-3223293:1:exon
so has part: feature:3228636-3228709:1:exon
so has part: feature:3231844-3231924:1:exon
so has part: feature:3234663-3234915:1:exon
so has part: feature:3236015-3236242:1:exon
so has part: feature:3238396-3238524:1:exon
so has part: feature:3239945-3240230:1:exon
so has part: feature:3241871-3241927:1:exon
so has part: feature:3242351-3242830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3217597-3217846:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3223241-3223293:1:exon

position:3223241:1
position: 3223241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3228636-3228709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3231844-3231924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3234663-3234915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3236015-3236242:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3238396-3238524:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3239945-3240230:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3241871-3241927:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3242351-3242830:1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B isoform X1
translation: MASTVSVNLDKDASLDGIPPAKKPRKLLPSLKTKKPQELVLVIGTGISAAVAPKVPALKSWKGLIQALLDAAIDFDLLEEEESRKFQKCLQEDKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKRLLQSVLRLMENGALVLTTNFDNLLELYAADQGKQLESLDLTDEKKVLEWAQEKRKLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMGEIQKLYENKSFLFLGCGRTVDDTTFQALFLEAVKHKSDLEHFMLVQRGDVDEFKKLRENMLDKGIKVISYGNEYADLPDYFERLTSEISTRDRTGLPREGQLNGSSTAHTEIKGGAAPEPLSLQLN
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(3231851..3231924,3234663..3234915,3236015..3236242,3238396..3238524,3239945..3240230,3241871..3241927,3242351..3242391)
location: region:3231851-3242391:1
so has part: feature:3231851-3231924:1:exon
so has part: feature:3234663-3234915:1:exon
so has part: feature:3236015-3236242:1:exon
so has part: feature:3238396-3238524:1:exon
so has part: feature:3239945-3240230:1:exon
so has part: feature:3241871-3241927:1:exon
so has part: feature:3242351-3242391:1:exon

XP_034610269.1
type: Protein
SIO_000068: ncbiprotein

position:3231851:1
position: 3231851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3242391:1
position: 3242391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3231851-3231924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3234663-3234915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3236015-3236242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3238396-3238524:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3239945-3240230:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3241871-3241927:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3242351-3242391:1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B isoform X1
translation: MASTVSVNLDKDASLDGIPPAKKPRKLLPSLKTKKPQELVLVIGTGISAAVAPKVPALKSWKGLIQALLDAAIDFDLLEEEESRKFQKCLQEDKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKRLLQSVLRLMENGALVLTTNFDNLLELYAADQGKQLESLDLTDEKKVLEWAQEKRKLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMGEIQKLYENKSFLFLGCGRTVDDTTFQALFLEAVKHKSDLEHFMLVQRGDVDEFKKLRENMLDKGIKVISYGNEYADLPDYFERLTSEISTRDRTGLPREGQLNGSSTAHTEIKGGAAPEPLSLQLN
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(3231851..3231924,3234663..3234915,3236015..3236242,3238396..3238524,3239945..3240230,3241871..3241927,3242351..3242391)
location: region:3231851-3242391:1
so has part: feature:3231851-3231924:1:exon
so has part: feature:3234663-3234915:1:exon
so has part: feature:3236015-3236242:1:exon
so has part: feature:3238396-3238524:1:exon
so has part: feature:3239945-3240230:1:exon
so has part: feature:3241871-3241927:1:exon
so has part: feature:3242351-3242391:1:exon

XP_034610270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3231851-3231924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3234663-3234915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3236015-3236242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3238396-3238524:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3239945-3240230:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3241871-3241927:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3242351-3242391:1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B isoform X2
translation: MASTVSVNLDKDASLDGIPPAKKPRKLLPSLKTKKPQELVLVIGTGISAAVAPKVPALKSWKGLIQALLDAAIDFDLLEEEESRKFQKCLQEDKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKRLLQSVLRLMENGALVLTTNFDNLLELYAADQGKQLESLDLTDEKKGEIQKLYENKSFLFLGCGRTVDDTTFQALFLEAVKHKSDLEHFMLVQRGDVDEFKKLRENMLDKGIKVISYGNEYADLPDYFERLTSEISTRDRTGLPREGQLNGSSTAHTEIKGGAAPEPLSLQLN
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(3231851..3231924,3234663..3234915,3236015..3236242,3239945..3240230,3241871..3241927,3242351..3242391)
location: region:3231851-3242391:1
so has part: feature:3231851-3231924:1:exon
so has part: feature:3234663-3234915:1:exon
so has part: feature:3236015-3236242:1:exon
so has part: feature:3239945-3240230:1:exon
so has part: feature:3241871-3241927:1:exon
so has part: feature:3242351-3242391:1:exon

XP_034610271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3231851-3231924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3234663-3234915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3236015-3236242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3239945-3240230:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3241871-3241927:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3242351-3242391:1:exon

SRPRA
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SRPRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3244127..3272286)
location: region:3244127-3272286:-1
so has part: feature:3244127-3272286:-1:exon
subclass of: SO_0000010

117868462
type: Gene
SIO_000068: ncbigene

position:3244127:-1
position: 3244127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3272286:-1
position: 3272286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3244127-3272286:-1:exon

SRPRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SRPRA
product: SRP receptor subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_034754377.1
SIO_010081: SRPRA
subclass of: SO_0000673
so part of: SRPRA
location: complement(join(3244127..3244554,3248378..3248476,3248642..3248805,3249690..3249903,3251193..3251365,3252287..3252373,3253981..3254099,3254817..3254926,3255689..3255842,3257537..3257702,3258728..3258888,3261883..3262046,3264786..3264869,3272041..3272286))
location: region:3244127-3272286:-1
so has part: feature:3272041-3272286:-1:exon
so has part: feature:3264786-3264869:-1:exon
so has part: feature:3261883-3262046:-1:exon
so has part: feature:3258728-3258888:-1:exon
so has part: feature:3257537-3257702:-1:exon
so has part: feature:3255689-3255842:-1:exon
so has part: feature:3254817-3254926:-1:exon
so has part: feature:3253981-3254099:-1:exon
so has part: feature:3252287-3252373:-1:exon
so has part: feature:3251193-3251365:-1:exon
so has part: feature:3249690-3249903:-1:exon
so has part: feature:3248642-3248805:-1:exon
so has part: feature:3248378-3248476:-1:exon
so has part: feature:3244127-3244554:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3272041-3272286:-1:exon

position:3272041:-1
position: 3272041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3264786-3264869:-1:exon

position:3264786:-1
position: 3264786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3264869:-1
position: 3264869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3261883-3262046:-1:exon

position:3261883:-1
position: 3261883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3262046:-1
position: 3262046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3258728-3258888:-1:exon

position:3258728:-1
position: 3258728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3258888:-1
position: 3258888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3257537-3257702:-1:exon

position:3257537:-1
position: 3257537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3257702:-1
position: 3257702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3255689-3255842:-1:exon

position:3255689:-1
position: 3255689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3255842:-1
position: 3255842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3254817-3254926:-1:exon

position:3254817:-1
position: 3254817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3254926:-1
position: 3254926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3253981-3254099:-1:exon

position:3253981:-1
position: 3253981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3254099:-1
position: 3254099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3252287-3252373:-1:exon

position:3252287:-1
position: 3252287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3252373:-1
position: 3252373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3251193-3251365:-1:exon

position:3251193:-1
position: 3251193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3251365:-1
position: 3251365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3249690-3249903:-1:exon

position:3249690:-1
position: 3249690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3249903:-1
position: 3249903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3248642-3248805:-1:exon

position:3248642:-1
position: 3248642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3248805:-1
position: 3248805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3248378-3248476:-1:exon

position:3248378:-1
position: 3248378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3248476:-1
position: 3248476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3244127-3244554:-1:exon

position:3244554:-1
position: 3244554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRPRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SRPRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal recognition particle receptor subunit alpha
translation: MLDFFTIFSKGGLVLWCFQGVRGPVAACTAPVNALIRSVLLQERGGNNSFNHEALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHKEFRDKYRNEFQQKGTLGLLNGTFDFKEDFLHLLREAEESSKIRAPTAMKTFEQSVKSQKTVKSMIETRGEKPKEKAKNKKNKGSKKEASGTEAATVPSKAAPDAKQNPPAATGDREELTKDEILQKNREEFFKKRLKGGEKSNKSPKPETQKEKGKKPRVWELGNSNAKVLDYSNSTTNGNTDTCPTEEYDPDMALGDRDREPGRLYDLEYESDEEEPEEEKVIQNPSQPRAKKGGLGGMFGMLKGLVGSKSLTREDMDSVLEKMKDHLIAKNVAAEIAVQLCESVAKKLEGKVMGTFTTVTSTVKQALQESLVQILQPQRRVDMLRDVMDAQRHRRPYVVTFCGVNGVGKSTNLAKISFWLIENGYSVLIAACDTFRAGAVEQLRTHTRRLNALHPPESHGGRTMVQLYEKGYGKDAAGIAMEAISYARNQGFDVVLVDTAGRMQDNAPLMTALAKLIAVNTPDLVLFVGEALVGNEAVDQLVKFNKALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVTALMKA
SIO_010081: SRPRA
subclass of: SO_0000673
so part of: SRPRA
location: complement(join(3244426..3244554,3248378..3248476,3248642..3248805,3249690..3249903,3251193..3251365,3252287..3252373,3253981..3254099,3254817..3254926,3255689..3255842,3257537..3257702,3258728..3258888,3261883..3262046,3264786..3264869,3272041..3272166))
location: region:3244426-3272166:-1
so has part: feature:3272041-3272166:-1:exon
so has part: feature:3264786-3264869:-1:exon
so has part: feature:3261883-3262046:-1:exon
so has part: feature:3258728-3258888:-1:exon
so has part: feature:3257537-3257702:-1:exon
so has part: feature:3255689-3255842:-1:exon
so has part: feature:3254817-3254926:-1:exon
so has part: feature:3253981-3254099:-1:exon
so has part: feature:3252287-3252373:-1:exon
so has part: feature:3251193-3251365:-1:exon
so has part: feature:3249690-3249903:-1:exon
so has part: feature:3248642-3248805:-1:exon
so has part: feature:3248378-3248476:-1:exon
so has part: feature:3244426-3244554:-1:exon

XP_034610268.1
type: Protein
SIO_000068: ncbiprotein

position:3244426:-1
position: 3244426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3272166:-1
position: 3272166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3272041-3272166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3264786-3264869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3261883-3262046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3258728-3258888:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3257537-3257702:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3255689-3255842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3254817-3254926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3253981-3254099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3252287-3252373:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3251193-3251365:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3249690-3249903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3248642-3248805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3248378-3248476:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3244426-3244554:-1:exon

FOXRED1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: FOXRED1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3272675..3290381
location: region:3272675-3290381:1
so has part: feature:3272675-3290381:1:exon
subclass of: SO_0000010

117868683
type: Gene
SIO_000068: ncbigene

position:3272675:1
position: 3272675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3290381:1
position: 3290381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3272675-3290381:1:exon

FOXRED1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: FOXRED1
product: FAD dependent oxidoreductase domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034754877.1
SIO_010081: FOXRED1
subclass of: SO_0000673
so part of: FOXRED1
location: join(3272675..3272860,3274362..3274582,3277488..3277598,3278379..3278497,3280163..3280257,3281625..3281726,3283224..3283297,3284386..3284546,3285160..3285289,3286268..3286372,3286869..3287148,3289727..3290381)
location: region:3272675-3290381:1
so has part: feature:3272675-3272860:1:exon
so has part: feature:3274362-3274582:1:exon
so has part: feature:3277488-3277598:1:exon
so has part: feature:3278379-3278497:1:exon
so has part: feature:3280163-3280257:1:exon
so has part: feature:3281625-3281726:1:exon
so has part: feature:3283224-3283297:1:exon
so has part: feature:3284386-3284546:1:exon
so has part: feature:3285160-3285289:1:exon
so has part: feature:3286268-3286372:1:exon
so has part: feature:3286869-3287148:1:exon
so has part: feature:3289727-3290381:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3272675-3272860:1:exon

position:3272860:1
position: 3272860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3274362-3274582:1:exon

position:3274362:1
position: 3274362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3274582:1
position: 3274582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3277488-3277598:1:exon

position:3277488:1
position: 3277488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3277598:1
position: 3277598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3278379-3278497:1:exon

position:3278379:1
position: 3278379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3278497:1
position: 3278497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3280163-3280257:1:exon

position:3280163:1
position: 3280163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3280257:1
position: 3280257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3281625-3281726:1:exon

position:3281625:1
position: 3281625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3281726:1
position: 3281726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3283224-3283297:1:exon

position:3283224:1
position: 3283224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3283297:1
position: 3283297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3284386-3284546:1:exon

position:3284386:1
position: 3284386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3284546:1
position: 3284546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3285160-3285289:1:exon

position:3285160:1
position: 3285160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3285289:1
position: 3285289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3286268-3286372:1:exon

position:3286268:1
position: 3286268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3286372:1
position: 3286372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3286869-3287148:1:exon

position:3286869:1
position: 3286869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3287148:1
position: 3287148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3289727-3290381:1:exon

position:3289727:1
position: 3289727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FOXRED1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: FOXRED1
product: FAD dependent oxidoreductase domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_034754876.1
SIO_010081: FOXRED1
subclass of: SO_0000673
so part of: FOXRED1
location: join(3272676..3272860,3274362..3274582,3277488..3277598,3278379..3278497,3280163..3280257,3281625..3281726,3283224..3283297,3284386..3284546,3285160..3285289,3286268..3286372,3286869..3290381)
location: region:3272676-3290381:1
so has part: feature:3272676-3272860:1:exon
so has part: feature:3274362-3274582:1:exon
so has part: feature:3277488-3277598:1:exon
so has part: feature:3278379-3278497:1:exon
so has part: feature:3280163-3280257:1:exon
so has part: feature:3281625-3281726:1:exon
so has part: feature:3283224-3283297:1:exon
so has part: feature:3284386-3284546:1:exon
so has part: feature:3285160-3285289:1:exon
so has part: feature:3286268-3286372:1:exon
so has part: feature:3286869-3290381:1:exon

position:3272676:1
position: 3272676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3272676-3272860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3274362-3274582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3277488-3277598:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3278379-3278497:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3280163-3280257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3281625-3281726:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3283224-3283297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3284386-3284546:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3285160-3285289:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3286268-3286372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3286869-3290381:1:exon

FOXRED1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: FOXRED1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAD-dependent oxidoreductase domain-containing protein 1
translation: MVRAGRLCRGLGLLRPRPLPDPAGGSAPPSRQLRTGHPQRRDLFSDLEKEVVKFRKKLRASLPGSDWDPFGTTKGLPPERADVVIVGGGVMGWSVAYWLKALKPQRDALRVVVIEKDPTYSQASTVLSAGGIRQQFSLPENIQMSIYSAFFLRTINEHLGVVNEPPIDIQFNHSGYLFLASEDGAADLEENVRIQRNEGAEVSLLSPAQLKKKYPWINTDGVAVASYGLENEGWFDPWSLLNAFRRKAMSMGVSQCFGEVISFTTSSREIMTPKGELTFSRINYVRVQMPNSLEYQPVECSLVVNAAGPWSQKLAEMAGIGIGPPNTQEGIKLPVEPRKRYIFVWHCPDGPGLDCPMLVDTTGAYFRREGIGGNYLGSLSPAEEEEPDIQDLEVDHNFFQEKIWPCLAHRVPVFESLKVKSAWAGYYDYNTFDQNAVLGPHPLVENMLFITGFSGHGLQQSPAAGKAVAELILDNKFSTIHLEKLSFNRFVSGEQVLERNIV
SIO_010081: FOXRED1
subclass of: SO_0000673
so part of: FOXRED1
location: join(3272725..3272860,3274362..3274582,3277488..3277598,3278379..3278497,3280163..3280257,3281625..3281726,3283224..3283297,3284386..3284546,3285160..3285289,3286268..3286372,3286869..3287123)
location: region:3272725-3287123:1
so has part: feature:3272725-3272860:1:exon
so has part: feature:3274362-3274582:1:exon
so has part: feature:3277488-3277598:1:exon
so has part: feature:3278379-3278497:1:exon
so has part: feature:3280163-3280257:1:exon
so has part: feature:3281625-3281726:1:exon
so has part: feature:3283224-3283297:1:exon
so has part: feature:3284386-3284546:1:exon
so has part: feature:3285160-3285289:1:exon
so has part: feature:3286268-3286372:1:exon
so has part: feature:3286869-3287123:1:exon

XP_034610767.1
type: Protein
SIO_000068: ncbiprotein

position:3272725:1
position: 3272725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3287123:1
position: 3287123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3272725-3272860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3274362-3274582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3277488-3277598:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3278379-3278497:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3280163-3280257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3281625-3281726:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3283224-3283297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3284386-3284546:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3285160-3285289:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3286268-3286372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3286869-3287123:1:exon

FOXRED1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: FOXRED1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAD-dependent oxidoreductase domain-containing protein 1
translation: MVRAGRLCRGLGLLRPRPLPDPAGGSAPPSRQLRTGHPQRRDLFSDLEKEVVKFRKKLRASLPGSDWDPFGTTKGLPPERADVVIVGGGVMGWSVAYWLKALKPQRDALRVVVIEKDPTYSQASTVLSAGGIRQQFSLPENIQMSIYSAFFLRTINEHLGVVNEPPIDIQFNHSGYLFLASEDGAADLEENVRIQRNEGAEVSLLSPAQLKKKYPWINTDGVAVASYGLENEGWFDPWSLLNAFRRKAMSMGVSQCFGEVISFTTSSREIMTPKGELTFSRINYVRVQMPNSLEYQPVECSLVVNAAGPWSQKLAEMAGIGIGPPNTQEGIKLPVEPRKRYIFVWHCPDGPGLDCPMLVDTTGAYFRREGIGGNYLGSLSPAEEEEPDIQDLEVDHNFFQEKIWPCLAHRVPVFESLKVKSAWAGYYDYNTFDQNAVLGPHPLVENMLFITGFSGHGLQQSPAAGKAVAELILDNKFSTIHLEKLSFNRFVSGEQVLERNIV
SIO_010081: FOXRED1
subclass of: SO_0000673
so part of: FOXRED1
location: join(3272725..3272860,3274362..3274582,3277488..3277598,3278379..3278497,3280163..3280257,3281625..3281726,3283224..3283297,3284386..3284546,3285160..3285289,3286268..3286372,3286869..3287123)
location: region:3272725-3287123:1
so has part: feature:3272725-3272860:1:exon
so has part: feature:3274362-3274582:1:exon
so has part: feature:3277488-3277598:1:exon
so has part: feature:3278379-3278497:1:exon
so has part: feature:3280163-3280257:1:exon
so has part: feature:3281625-3281726:1:exon
so has part: feature:3283224-3283297:1:exon
so has part: feature:3284386-3284546:1:exon
so has part: feature:3285160-3285289:1:exon
so has part: feature:3286268-3286372:1:exon
so has part: feature:3286869-3287123:1:exon

XP_034610768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3272725-3272860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3274362-3274582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3277488-3277598:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3278379-3278497:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3280163-3280257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3281625-3281726:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3283224-3283297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3284386-3284546:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3285160-3285289:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3286268-3286372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3286869-3287123:1:exon

LOC117868682
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3291730..3303635)
location: region:3291730-3303635:-1
so has part: feature:3291730-3303635:-1:exon
subclass of: SO_0000010

117868682
type: Gene
SIO_000068: ncbigene

position:3291730:-1
position: 3291730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3303635:-1
position: 3303635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3291730-3303635:-1:exon

LOC117868682
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868682
product: cryptochrome-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034754873.1
SIO_010081: LOC117868682
subclass of: SO_0000673
so part of: LOC117868682
location: complement(join(3291730..3293403,3293924..3294153,3294676..3294827,3295859..3295999,3296932..3297099,3297822..3297962,3298470..3298624,3299754..3299872,3300012..3300206,3301690..3301964,3303564..3303635))
location: region:3291730-3303635:-1
so has part: feature:3303564-3303635:-1:exon
so has part: feature:3301690-3301964:-1:exon
so has part: feature:3300012-3300206:-1:exon
so has part: feature:3299754-3299872:-1:exon
so has part: feature:3298470-3298624:-1:exon
so has part: feature:3297822-3297962:-1:exon
so has part: feature:3296932-3297099:-1:exon
so has part: feature:3295859-3295999:-1:exon
so has part: feature:3294676-3294827:-1:exon
so has part: feature:3293924-3294153:-1:exon
so has part: feature:3291730-3293403:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3303564-3303635:-1:exon

position:3303564:-1
position: 3303564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3301690-3301964:-1:exon

position:3301690:-1
position: 3301690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3301964:-1
position: 3301964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3300012-3300206:-1:exon

position:3300012:-1
position: 3300012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3300206:-1
position: 3300206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3299754-3299872:-1:exon

position:3299754:-1
position: 3299754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3299872:-1
position: 3299872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3298470-3298624:-1:exon

position:3298470:-1
position: 3298470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3298624:-1
position: 3298624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3297822-3297962:-1:exon

position:3297822:-1
position: 3297822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3297962:-1
position: 3297962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3296932-3297099:-1:exon

position:3296932:-1
position: 3296932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3297099:-1
position: 3297099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3295859-3295999:-1:exon

position:3295859:-1
position: 3295859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3295999:-1
position: 3295999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3294676-3294827:-1:exon

position:3294676:-1
position: 3294676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3294827:-1
position: 3294827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3293924-3294153:-1:exon

position:3293924:-1
position: 3293924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3294153:-1
position: 3294153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3291730-3293403:-1:exon

position:3293403:-1
position: 3293403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117868682
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868682
product: cryptochrome-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034754872.1
SIO_010081: LOC117868682
subclass of: SO_0000673
so part of: LOC117868682
location: complement(join(3291730..3293403,3293924..3294153,3294676..3294827,3295859..3295999,3296932..3297099,3297822..3297962,3298470..3298624,3299754..3299872,3300012..3300206,3301690..3301963,3302455..3302669))
location: region:3291730-3302669:-1
so has part: feature:3302455-3302669:-1:exon
so has part: feature:3301690-3301963:-1:exon
so has part: feature:3300012-3300206:-1:exon
so has part: feature:3299754-3299872:-1:exon
so has part: feature:3298470-3298624:-1:exon
so has part: feature:3297822-3297962:-1:exon
so has part: feature:3296932-3297099:-1:exon
so has part: feature:3295859-3295999:-1:exon
so has part: feature:3294676-3294827:-1:exon
so has part: feature:3293924-3294153:-1:exon
so has part: feature:3291730-3293403:-1:exon

position:3302669:-1
position: 3302669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3302455-3302669:-1:exon

position:3302455:-1
position: 3302455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3301690-3301963:-1:exon

position:3301963:-1
position: 3301963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3300012-3300206:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3299754-3299872:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3298470-3298624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3297822-3297962:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3296932-3297099:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3295859-3295999:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3294676-3294827:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3293924-3294153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3291730-3293403:-1:exon

LOC117868682
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117868682
product: cryptochrome-1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034754875.1
SIO_010081: LOC117868682
subclass of: SO_0000673
so part of: LOC117868682
location: complement(join(3291730..3293403,3293924..3294153,3294676..3294827,3295859..3295999,3296932..3297099,3297822..3297962,3298470..3298624,3299754..3299872,3300012..3300206,3301690..3301964,3302350..3302471))
location: region:3291730-3302471:-1
so has part: feature:3302350-3302471:-1:exon
so has part: feature:3301690-3301964:-1:exon
so has part: feature:3300012-3300206:-1:exon
so has part: feature:3299754-3299872:-1:exon
so has part: feature:3298470-3298624:-1:exon
so has part: feature:3297822-3297962:-1:exon
so has part: feature:3296932-3297099:-1:exon
so has part: feature:3295859-3295999:-1:exon
so has part: feature:3294676-3294827:-1:exon
so has part: feature:3293924-3294153:-1:exon
so has part: feature:3291730-3293403:-1:exon

position:3302471:-1
position: 3302471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3302350-3302471:-1:exon

position:3302350:-1
position: 3302350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3301690-3301964:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3300012-3300206:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3299754-3299872:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3298470-3298624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3297822-3297962:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3296932-3297099:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3295859-3295999:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3294676-3294827:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3293924-3294153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3291730-3293403:-1:exon

LOC117868682
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cryptochrome-1-like
translation: MKHVSIHWFRKGLRLHDNPALLAATTDCRKLYPIFVLDPWFPKNMRVSVNRWRFLVESLRDLDESLQKLNSRLFVVRGRPTEIFPVLFKEWKVTRLTFEIDTEPYSRQRDSEVASLAAEHGVQVIQKVSNTLYDTDRVIAENNGKVPLTYVRLQTLLAALGPPKRPVPAPTLENLKDCCTPCKDNHGAEYGIPTLEELGQDPEQAGLRLYPGGESEALCRLDLHMNRTAWVCNFQKPQTEPNSLNPSTTVLSPYIKFGCLSVRTFWWRLAEVYQGRKHSNPPVSLHGQLLWREFFYTAGAGIPNFNKMEGNPVCVQVDWDNNPEHLRAWSEGRTGYPFIDAIMAQLRTEGWIHHLARHAVACFLTRGDLWISWEQGQKVFEELLLDADWSLNAGNWQWLSASAFFHQFFRVYSPIAFGKKTDKGGEYIKKYLPFLRKFPAEYIYEPWKAPRSMQEQAGCVIGRDYPKPIVVHEVVSKRNLERMKAAYARRSSSTTAQLEGGGGKKGAKRRTPTGPSVAELLTKKPKTKSS
SIO_010081: LOC117868682
subclass of: SO_0000673
so part of: LOC117868682
location: complement(join(3293327..3293403,3293924..3294153,3294676..3294827,3295859..3295999,3296932..3297099,3297822..3297962,3298470..3298624,3299754..3299872,3300012..3300206,3301690..3301904))
location: region:3293327-3301904:-1
so has part: feature:3301690-3301904:-1:exon
so has part: feature:3300012-3300206:-1:exon
so has part: feature:3299754-3299872:-1:exon
so has part: feature:3298470-3298624:-1:exon
so has part: feature:3297822-3297962:-1:exon
so has part: feature:3296932-3297099:-1:exon
so has part: feature:3295859-3295999:-1:exon
so has part: feature:3294676-3294827:-1:exon
so has part: feature:3293924-3294153:-1:exon
so has part: feature:3293327-3293403:-1:exon

XP_034610763.1
type: Protein
SIO_000068: ncbiprotein

position:3293327:-1
position: 3293327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3301904:-1
position: 3301904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3301690-3301904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3300012-3300206:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3299754-3299872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3298470-3298624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3297822-3297962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3296932-3297099:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3295859-3295999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3294676-3294827:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3293924-3294153:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3293327-3293403:-1:exon

LOC117868682
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cryptochrome-1-like
translation: MKHVSIHWFRKGLRLHDNPALLAATTDCRKLYPIFVLDPWFPKNMRVSVNRWRFLVESLRDLDESLQKLNSRLFVVRGRPTEIFPVLFKEWKVTRLTFEIDTEPYSRQRDSEVASLAAEHGVQVIQKVSNTLYDTDRVIAENNGKVPLTYVRLQTLLAALGPPKRPVPAPTLENLKDCCTPCKDNHGAEYGIPTLEELGQDPEQAGLRLYPGGESEALCRLDLHMNRTAWVCNFQKPQTEPNSLNPSTTVLSPYIKFGCLSVRTFWWRLAEVYQGRKHSNPPVSLHGQLLWREFFYTAGAGIPNFNKMEGNPVCVQVDWDNNPEHLRAWSEGRTGYPFIDAIMAQLRTEGWIHHLARHAVACFLTRGDLWISWEQGQKVFEELLLDADWSLNAGNWQWLSASAFFHQFFRVYSPIAFGKKTDKGGEYIKKYLPFLRKFPAEYIYEPWKAPRSMQEQAGCVIGRDYPKPIVVHEVVSKRNLERMKAAYARRSSSTTAQLEGGGGKKGAKRRTPTGPSVAELLTKKPKTKSS
SIO_010081: LOC117868682
subclass of: SO_0000673
so part of: LOC117868682
location: complement(join(3293327..3293403,3293924..3294153,3294676..3294827,3295859..3295999,3296932..3297099,3297822..3297962,3298470..3298624,3299754..3299872,3300012..3300206,3301690..3301904))
location: region:3293327-3301904:-1
so has part: feature:3301690-3301904:-1:exon
so has part: feature:3300012-3300206:-1:exon
so has part: feature:3299754-3299872:-1:exon
so has part: feature:3298470-3298624:-1:exon
so has part: feature:3297822-3297962:-1:exon
so has part: feature:3296932-3297099:-1:exon
so has part: feature:3295859-3295999:-1:exon
so has part: feature:3294676-3294827:-1:exon
so has part: feature:3293924-3294153:-1:exon
so has part: feature:3293327-3293403:-1:exon

XP_034610764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3301690-3301904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3300012-3300206:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3299754-3299872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3298470-3298624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3297822-3297962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3296932-3297099:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3295859-3295999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3294676-3294827:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3293924-3294153:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3293327-3293403:-1:exon

LOC117868682
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117868682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cryptochrome-1-like
translation: MKHVSIHWFRKGLRLHDNPALLAATTDCRKLYPIFVLDPWFPKNMRVSVNRWRFLVESLRDLDESLQKLNSRLFVVRGRPTEIFPVLFKEWKVTRLTFEIDTEPYSRQRDSEVASLAAEHGVQVIQKVSNTLYDTDRVIAENNGKVPLTYVRLQTLLAALGPPKRPVPAPTLENLKDCCTPCKDNHGAEYGIPTLEELGQDPEQAGLRLYPGGESEALCRLDLHMNRTAWVCNFQKPQTEPNSLNPSTTVLSPYIKFGCLSVRTFWWRLAEVYQGRKHSNPPVSLHGQLLWREFFYTAGAGIPNFNKMEGNPVCVQVDWDNNPEHLRAWSEGRTGYPFIDAIMAQLRTEGWIHHLARHAVACFLTRGDLWISWEQGQKVFEELLLDADWSLNAGNWQWLSASAFFHQFFRVYSPIAFGKKTDKGGEYIKKYLPFLRKFPAEYIYEPWKAPRSMQEQAGCVIGRDYPKPIVVHEVVSKRNLERMKAAYARRSSSTTAQLEGGGGKKGAKRRTPTGPSVAELLTKKPKTKSS
SIO_010081: LOC117868682
subclass of: SO_0000673
so part of: LOC117868682
location: complement(join(3293327..3293403,3293924..3294153,3294676..3294827,3295859..3295999,3296932..3297099,3297822..3297962,3298470..3298624,3299754..3299872,3300012..3300206,3301690..3301904))
location: region:3293327-3301904:-1
so has part: feature:3301690-3301904:-1:exon
so has part: feature:3300012-3300206:-1:exon
so has part: feature:3299754-3299872:-1:exon
so has part: feature:3298470-3298624:-1:exon
so has part: feature:3297822-3297962:-1:exon
so has part: feature:3296932-3297099:-1:exon
so has part: feature:3295859-3295999:-1:exon
so has part: feature:3294676-3294827:-1:exon
so has part: feature:3293924-3294153:-1:exon
so has part: feature:3293327-3293403:-1:exon

XP_034610766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3301690-3301904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3300012-3300206:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3299754-3299872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3298470-3298624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3297822-3297962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3296932-3297099:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3295859-3295999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3294676-3294827:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3293924-3294153:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3293327-3293403:-1:exon

TIRAP
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3302793..3313585
location: region:3302793-3313585:1
so has part: feature:3302793-3313585:1:exon
subclass of: SO_0000010

117868684
type: Gene
SIO_000068: ncbigene

position:3302793:1
position: 3302793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3313585:1
position: 3313585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3302793-3313585:1:exon

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034754880.1
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(3302793..3303468,3308666..3308867,3309230..3309280,3311508..3312110,3312540..3313585)
location: region:3302793-3313585:1
so has part: feature:3302793-3303468:1:exon
so has part: feature:3308666-3308867:1:exon
so has part: feature:3309230-3309280:1:exon
so has part: feature:3311508-3312110:1:exon
so has part: feature:3312540-3313585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3302793-3303468:1:exon

position:3303468:1
position: 3303468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3308666-3308867:1:exon

position:3308666:1
position: 3308666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3308867:1
position: 3308867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3309230-3309280:1:exon

position:3309230:1
position: 3309230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3309280:1
position: 3309280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3311508-3312110:1:exon

position:3311508:1
position: 3311508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3312110:1
position: 3312110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3312540-3313585:1:exon

position:3312540:1
position: 3312540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_034754878.1
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(3302793..3303365,3308666..3308867,3309230..3309280,3311508..3312110,3312540..3313585)
location: region:3302793-3313585:1
so has part: feature:3302793-3303365:1:exon
so has part: feature:3308666-3308867:1:exon
so has part: feature:3309230-3309280:1:exon
so has part: feature:3311508-3312110:1:exon
so has part: feature:3312540-3313585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3302793-3303365:1:exon

position:3303365:1
position: 3303365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3308666-3308867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3309230-3309280:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3311508-3312110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3312540-3313585:1:exon

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_034754882.1
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(3302793..3303365,3308666..3308867,3309230..3309280,3311508..3312118)
location: region:3302793-3312118:1
so has part: feature:3302793-3303365:1:exon
so has part: feature:3308666-3308867:1:exon
so has part: feature:3309230-3309280:1:exon
so has part: feature:3311508-3312118:1:exon

position:3312118:1
position: 3312118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3302793-3303365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3308666-3308867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3309230-3309280:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3311508-3312118:1:exon

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034754879.1
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(3308316..3308867,3309230..3309280,3311508..3312110,3312540..3313585)
location: region:3308316-3313585:1
so has part: feature:3308316-3308867:1:exon
so has part: feature:3309230-3309280:1:exon
so has part: feature:3311508-3312110:1:exon
so has part: feature:3312540-3313585:1:exon

position:3308316:1
position: 3308316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3308316-3308867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3309230-3309280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3311508-3312110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3312540-3313585:1:exon

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034754881.1
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(3308874..3309039,3309230..3309280,3311508..3312110,3312540..3313585)
location: region:3308874-3313585:1
so has part: feature:3308874-3309039:1:exon
so has part: feature:3309230-3309280:1:exon
so has part: feature:3311508-3312110:1:exon
so has part: feature:3312540-3313585:1:exon

position:3308874:1
position: 3308874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3308874-3309039:1:exon

position:3309039:1
position: 3309039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3309230-3309280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3311508-3312110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3312540-3313585:1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X1
translation: MAGWVRRLLQKPKRSSSSAGSNLNTKQSPSSSSSSLVTTASSSTSSAVASQGQLSPASQVSISSAGSARWAKSYDVCICHSNEDLEFVEEMVSYLESQTEGIRCFLQLRDAMPGSAIMTELCDAVQNSHCWVLLITPSFLEDPWCRYQMHQALAEAPMANGRAIPVLKGIDRKDYPRELRCLYYIDVTRKENGFRPIKDTILRYLQEHCRSTVSRIE
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(3309274..3309280,3311508..3312110,3312540..3312583)
location: region:3309274-3312583:1
so has part: feature:3309274-3309280:1:exon
so has part: feature:3311508-3312110:1:exon
so has part: feature:3312540-3312583:1:exon

XP_034610769.1
type: Protein
SIO_000068: ncbiprotein

position:3309274:1
position: 3309274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3312583:1
position: 3312583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3309274-3309280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3311508-3312110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3312540-3312583:1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X1
translation: MAGWVRRLLQKPKRSSSSAGSNLNTKQSPSSSSSSLVTTASSSTSSAVASQGQLSPASQVSISSAGSARWAKSYDVCICHSNEDLEFVEEMVSYLESQTEGIRCFLQLRDAMPGSAIMTELCDAVQNSHCWVLLITPSFLEDPWCRYQMHQALAEAPMANGRAIPVLKGIDRKDYPRELRCLYYIDVTRKENGFRPIKDTILRYLQEHCRSTVSRIE
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(3309274..3309280,3311508..3312110,3312540..3312583)
location: region:3309274-3312583:1
so has part: feature:3309274-3309280:1:exon
so has part: feature:3311508-3312110:1:exon
so has part: feature:3312540-3312583:1:exon

XP_034610770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3309274-3309280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3311508-3312110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3312540-3312583:1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X1
translation: MAGWVRRLLQKPKRSSSSAGSNLNTKQSPSSSSSSLVTTASSSTSSAVASQGQLSPASQVSISSAGSARWAKSYDVCICHSNEDLEFVEEMVSYLESQTEGIRCFLQLRDAMPGSAIMTELCDAVQNSHCWVLLITPSFLEDPWCRYQMHQALAEAPMANGRAIPVLKGIDRKDYPRELRCLYYIDVTRKENGFRPIKDTILRYLQEHCRSTVSRIE
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(3309274..3309280,3311508..3312110,3312540..3312583)
location: region:3309274-3312583:1
so has part: feature:3309274-3309280:1:exon
so has part: feature:3311508-3312110:1:exon
so has part: feature:3312540-3312583:1:exon

XP_034610771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3309274-3309280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3311508-3312110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3312540-3312583:1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X1
translation: MAGWVRRLLQKPKRSSSSAGSNLNTKQSPSSSSSSLVTTASSSTSSAVASQGQLSPASQVSISSAGSARWAKSYDVCICHSNEDLEFVEEMVSYLESQTEGIRCFLQLRDAMPGSAIMTELCDAVQNSHCWVLLITPSFLEDPWCRYQMHQALAEAPMANGRAIPVLKGIDRKDYPRELRCLYYIDVTRKENGFRPIKDTILRYLQEHCRSTVSRIE
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(3309274..3309280,3311508..3312110,3312540..3312583)
location: region:3309274-3312583:1
so has part: feature:3309274-3309280:1:exon
so has part: feature:3311508-3312110:1:exon
so has part: feature:3312540-3312583:1:exon

XP_034610772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3309274-3309280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3311508-3312110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3312540-3312583:1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X2
translation: MAGWVRRLLQKPKRSSSSAGSNLNTKQSPSSSSSSLVTTASSSTSSAVASQGQLSPASQVSISSAGSARWAKSYDVCICHSNEDLEFVEEMVSYLESQTEGIRCFLQLRDAMPGSAIMTELCDAVQNSHCWVLLITPSFLEDPWCRYQMHQALAEAPMANGRAIPVLKGIDRKDYPRELRCLYYIDVTRKENGFRPIKDTILRCK
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(3309274..3309280,3311508..3312118)
location: region:3309274-3312118:1
so has part: feature:3309274-3309280:1:exon
so has part: feature:3311508-3312118:1:exon

XP_034610773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3309274-3309280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3311508-3312118:1:exon

DCPS
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: DCPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3316485..3371547
location: region:3316485-3371547:1
so has part: feature:3316485-3371547:1:exon
subclass of: SO_0000010

117868609
type: Gene
SIO_000068: ncbigene

position:3316485:1
position: 3316485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3371547:1
position: 3371547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3316485-3371547:1:exon

DCPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: DCPS
product: decapping enzyme, scavenger
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_034754720.1
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(3316485..3316703,3325941..3326109,3350560..3350705,3360261..3360374,3366192..3366302,3371113..3371547)
location: region:3316485-3371547:1
so has part: feature:3316485-3316703:1:exon
so has part: feature:3325941-3326109:1:exon
so has part: feature:3350560-3350705:1:exon
so has part: feature:3360261-3360374:1:exon
so has part: feature:3366192-3366302:1:exon
so has part: feature:3371113-3371547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3316485-3316703:1:exon

position:3316703:1
position: 3316703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3325941-3326109:1:exon

position:3325941:1
position: 3325941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3326109:1
position: 3326109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3350560-3350705:1:exon

position:3350560:1
position: 3350560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3350705:1
position: 3350705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3360261-3360374:1:exon

position:3360261:1
position: 3360261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3360374:1
position: 3360374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3366192-3366302:1:exon

position:3366192:1
position: 3366192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3366302:1
position: 3366302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3371113-3371547:1:exon

position:3371113:1
position: 3371113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DCPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: DCPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: m7GpppX diphosphatase
translation: MRTPAAVTVMAEATGAKRKREGAEESAEPPGGGGGSFPLAELCVRRVLRESARDKAIFLHGQVNGASGDAKDAVVILEKTPFQEESISDLLKKHTKLKLQMSNDIYSTYHLYPPPQLSEIKTTVVYPATEKHLQKYLRQDVYLIRETGEDYKNITLPFIQSQSFSIQWVYNILEKTAEADRIIHENPDSSNGFVLIPDFKWNQKQLDDLYLIAICHRRGIKSLRDLTAEHLPLLRNILQEGKEAILKRFGVAGSQLRIYLHYQPSYFHLHVHFTALSYDAPGCSVERAHLLSDVIDNLELDPQYYQKRTLTFALRADEALLKKFQEAGKA
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(3316518..3316703,3325941..3326109,3350560..3350705,3360261..3360374,3366192..3366302,3371113..3371379)
location: region:3316518-3371379:1
so has part: feature:3316518-3316703:1:exon
so has part: feature:3325941-3326109:1:exon
so has part: feature:3350560-3350705:1:exon
so has part: feature:3360261-3360374:1:exon
so has part: feature:3366192-3366302:1:exon
so has part: feature:3371113-3371379:1:exon

XP_034610611.1
type: Protein
SIO_000068: ncbiprotein

position:3316518:1
position: 3316518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3371379:1
position: 3371379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3316518-3316703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3325941-3326109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3350560-3350705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3360261-3360374:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3366192-3366302:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3371113-3371379:1:exon

ST3GAL4
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3399841..3554839
location: region:3399841-3554839:1
so has part: feature:3399841-3554839:1:exon
subclass of: SO_0000010

117868638
type: Gene
SIO_000068: ncbigene

position:3399841:1
position: 3399841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3554839:1
position: 3554839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3399841-3554839:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034754768.1
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(3399841..3400092,3528882..3528960,3532163..3532244,3533600..3533680,3533894..3533991,3537926..3537986,3543460..3543555,3546201..3546390,3546519..3546662,3549843..3549986,3551390..3554839)
location: region:3399841-3554839:1
so has part: feature:3399841-3400092:1:exon
so has part: feature:3528882-3528960:1:exon
so has part: feature:3532163-3532244:1:exon
so has part: feature:3533600-3533680:1:exon
so has part: feature:3533894-3533991:1:exon
so has part: feature:3537926-3537986:1:exon
so has part: feature:3543460-3543555:1:exon
so has part: feature:3546201-3546390:1:exon
so has part: feature:3546519-3546662:1:exon
so has part: feature:3549843-3549986:1:exon
so has part: feature:3551390-3554839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3399841-3400092:1:exon

position:3400092:1
position: 3400092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3528882-3528960:1:exon

position:3528882:1
position: 3528882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3528960:1
position: 3528960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3532163-3532244:1:exon

position:3532163:1
position: 3532163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3532244:1
position: 3532244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3533600-3533680:1:exon

position:3533600:1
position: 3533600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3533680:1
position: 3533680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3533894-3533991:1:exon

position:3533894:1
position: 3533894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3533991:1
position: 3533991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3537926-3537986:1:exon

position:3537926:1
position: 3537926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3537986:1
position: 3537986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3543460-3543555:1:exon

position:3543460:1
position: 3543460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3543555:1
position: 3543555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3546201-3546390:1:exon

position:3546201:1
position: 3546201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3546390:1
position: 3546390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3546519-3546662:1:exon

position:3546519:1
position: 3546519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3546662:1
position: 3546662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3549843-3549986:1:exon

position:3549843:1
position: 3549843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3549986:1
position: 3549986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3551390-3554839:1:exon

position:3551390:1
position: 3551390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X2
translation: MLTLPSAIISHPSLPCKAVAFGSPSSGEPCSPLSAQFGLQSFLPFADGSGQQIADRKPPPPRHPDGCLMVTSSGRDESNSHGVAPPLLIKMINKSRWKMILGLAFFLVMAWYYISREERYIHLFSFPVQDVRMTCPRGEMEKKATLLIGNYTRDHPMFLHLNDYFWVKNRSPYELPYGTKGSEDILLRVLAITSYSVPESIQSMKCRRCAVVGNGHRLRNSSMGEAINKYDVVIRLNNAPVHGYEADVGSKTTMRLFYPESAHFDPRRENNPDTLLVLVPFKPMDFQWLEMILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYFMEITAAKLLNLSMKQPRKIKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEALAIKRMLELGVLKNLTHF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(3399886..3400092,3528882..3528960,3532163..3532244,3533600..3533680,3533894..3533991,3537926..3537986,3543460..3543555,3546201..3546390,3546519..3546662,3549843..3549986,3551390..3551476)
location: region:3399886-3551476:1
so has part: feature:3399886-3400092:1:exon
so has part: feature:3528882-3528960:1:exon
so has part: feature:3532163-3532244:1:exon
so has part: feature:3533600-3533680:1:exon
so has part: feature:3533894-3533991:1:exon
so has part: feature:3537926-3537986:1:exon
so has part: feature:3543460-3543555:1:exon
so has part: feature:3546201-3546390:1:exon
so has part: feature:3546519-3546662:1:exon
so has part: feature:3549843-3549986:1:exon
so has part: feature:3551390-3551476:1:exon

XP_034610659.1
type: Protein
SIO_000068: ncbiprotein

position:3399886:1
position: 3399886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3551476:1
position: 3551476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3399886-3400092:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3528882-3528960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3532163-3532244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3533600-3533680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3533894-3533991:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3537926-3537986:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3543460-3543555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3546201-3546390:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3546519-3546662:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3549843-3549986:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3551390-3551476:1:exon

LOC117868556
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3447823..3449015
location: region:3447823-3449015:1
so has part: feature:3447823-3449015:1:exon

117868556
type: Gene
SIO_000068: ncbigene

position:3447823:1
position: 3447823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3449015:1
position: 3449015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3447823-3449015:1:exon

LOC117868556
type: Exon
subclass of: SO_0000147
RO_0002162: 31138
gene: LOC117868556
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117868556
subclass of: SO_0000673
so part of: LOC117868556
location: 3447823..3448638
location: region:3447823-3448638:1
so has part: feature:3447823-3448638:1:exon

position:3448638:1
position: 3448638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3447823-3448638:1:exon

LOC117868556
type: Exon
subclass of: SO_0000147
RO_0002162: 31138
gene: LOC117868556
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117868556
subclass of: SO_0000673
so part of: LOC117868556
location: 3448669..3449015
location: region:3448669-3449015:1
so has part: feature:3448669-3449015:1:exon

position:3448669:1
position: 3448669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3448669-3449015:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034754767.1
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(3455021..3455195,3484358..3484433,3528882..3528960,3532163..3532244,3533600..3533680,3533894..3533991,3537926..3537986,3543460..3543555,3546201..3546390,3546519..3546662,3549843..3549986,3551390..3554839)
location: region:3455021-3554839:1
so has part: feature:3455021-3455195:1:exon
so has part: feature:3484358-3484433:1:exon
so has part: feature:3528882-3528960:1:exon
so has part: feature:3532163-3532244:1:exon
so has part: feature:3533600-3533680:1:exon
so has part: feature:3533894-3533991:1:exon
so has part: feature:3537926-3537986:1:exon
so has part: feature:3543460-3543555:1:exon
so has part: feature:3546201-3546390:1:exon
so has part: feature:3546519-3546662:1:exon
so has part: feature:3549843-3549986:1:exon
so has part: feature:3551390-3554839:1:exon

position:3455021:1
position: 3455021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3455021-3455195:1:exon

position:3455195:1
position: 3455195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3484358-3484433:1:exon

position:3484358:1
position: 3484358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3484433:1
position: 3484433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3528882-3528960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3532163-3532244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3533600-3533680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3533894-3533991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3537926-3537986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3543460-3543555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3546201-3546390:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3546519-3546662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3549843-3549986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3551390-3554839:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034754769.1
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(3455025..3455195,3484358..3484433,3528882..3528960,3532163..3532232,3533600..3533680,3533894..3533991,3537926..3537986,3543460..3543555,3546201..3546390,3546519..3546662,3549843..3549986,3551390..3554839)
location: region:3455025-3554839:1
so has part: feature:3455025-3455195:1:exon
so has part: feature:3484358-3484433:1:exon
so has part: feature:3528882-3528960:1:exon
so has part: feature:3532163-3532232:1:exon
so has part: feature:3533600-3533680:1:exon
so has part: feature:3533894-3533991:1:exon
so has part: feature:3537926-3537986:1:exon
so has part: feature:3543460-3543555:1:exon
so has part: feature:3546201-3546390:1:exon
so has part: feature:3546519-3546662:1:exon
so has part: feature:3549843-3549986:1:exon
so has part: feature:3551390-3554839:1:exon

position:3455025:1
position: 3455025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3455025-3455195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3484358-3484433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3528882-3528960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3532163-3532232:1:exon

position:3532232:1
position: 3532232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3533600-3533680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3533894-3533991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3537926-3537986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3543460-3543555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3546201-3546390:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3546519-3546662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3549843-3549986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3551390-3554839:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X1
translation: MGEVIHSPSHARTGASGAGFQLSSVVTPPWTWPSAAWLWGCVYRGRKSGIVKPHPAEVLPARLWNEGTDVTSSGRDESNSHGVAPPLLIKMINKSRWKMILGLAFFLVMAWYYISREERYIHLFSFPVQDVRMTCPRGEMEKKATLLIGNYTRDHPMFLHLNDYFWVKNRSPYELPYGTKGSEDILLRVLAITSYSVPESIQSMKCRRCAVVGNGHRLRNSSMGEAINKYDVVIRLNNAPVHGYEADVGSKTTMRLFYPESAHFDPRRENNPDTLLVLVPFKPMDFQWLEMILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYFMEITAAKLLNLSMKQPRKIKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEALAIKRMLELGVLKNLTHF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(3455065..3455195,3484358..3484433,3528882..3528960,3532163..3532244,3533600..3533680,3533894..3533991,3537926..3537986,3543460..3543555,3546201..3546390,3546519..3546662,3549843..3549986,3551390..3551476)
location: region:3455065-3551476:1
so has part: feature:3455065-3455195:1:exon
so has part: feature:3484358-3484433:1:exon
so has part: feature:3528882-3528960:1:exon
so has part: feature:3532163-3532244:1:exon
so has part: feature:3533600-3533680:1:exon
so has part: feature:3533894-3533991:1:exon
so has part: feature:3537926-3537986:1:exon
so has part: feature:3543460-3543555:1:exon
so has part: feature:3546201-3546390:1:exon
so has part: feature:3546519-3546662:1:exon
so has part: feature:3549843-3549986:1:exon
so has part: feature:3551390-3551476:1:exon

XP_034610658.1
type: Protein
SIO_000068: ncbiprotein

position:3455065:1
position: 3455065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3455065-3455195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3484358-3484433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3528882-3528960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3532163-3532244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3533600-3533680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3533894-3533991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3537926-3537986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3543460-3543555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3546201-3546390:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3546519-3546662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3549843-3549986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3551390-3551476:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X3
translation: MGEVIHSPSHARTGASGAGFQLSSVVTPPWTWPSAAWLWGCVYRGRKSGIVKPHPAEVLPARLWNEGTDVTSSGRDESNSHGVAPPLLIKMINKSRWKMILGLAFFLVMAWYYISREESFSFPVQDVRMTCPRGEMEKKATLLIGNYTRDHPMFLHLNDYFWVKNRSPYELPYGTKGSEDILLRVLAITSYSVPESIQSMKCRRCAVVGNGHRLRNSSMGEAINKYDVVIRLNNAPVHGYEADVGSKTTMRLFYPESAHFDPRRENNPDTLLVLVPFKPMDFQWLEMILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYFMEITAAKLLNLSMKQPRKIKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEALAIKRMLELGVLKNLTHF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(3455065..3455195,3484358..3484433,3528882..3528960,3532163..3532232,3533600..3533680,3533894..3533991,3537926..3537986,3543460..3543555,3546201..3546390,3546519..3546662,3549843..3549986,3551390..3551476)
location: region:3455065-3551476:1
so has part: feature:3455065-3455195:1:exon
so has part: feature:3484358-3484433:1:exon
so has part: feature:3528882-3528960:1:exon
so has part: feature:3532163-3532232:1:exon
so has part: feature:3533600-3533680:1:exon
so has part: feature:3533894-3533991:1:exon
so has part: feature:3537926-3537986:1:exon
so has part: feature:3543460-3543555:1:exon
so has part: feature:3546201-3546390:1:exon
so has part: feature:3546519-3546662:1:exon
so has part: feature:3549843-3549986:1:exon
so has part: feature:3551390-3551476:1:exon

XP_034610660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3455065-3455195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3484358-3484433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3528882-3528960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3532163-3532232:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3533600-3533680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3533894-3533991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3537926-3537986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3543460-3543555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3546201-3546390:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3546519-3546662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3549843-3549986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3551390-3551476:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034754770.1
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(3460584..3460787,3484358..3484433,3491453..3491556,3528882..3528960,3532163..3532244,3533600..3533680,3533894..3533991,3537926..3537986,3543460..3543555,3546201..3546390,3546519..3546662,3549843..3549986,3551390..3554839)
location: region:3460584-3554839:1
so has part: feature:3460584-3460787:1:exon
so has part: feature:3484358-3484433:1:exon
so has part: feature:3491453-3491556:1:exon
so has part: feature:3528882-3528960:1:exon
so has part: feature:3532163-3532244:1:exon
so has part: feature:3533600-3533680:1:exon
so has part: feature:3533894-3533991:1:exon
so has part: feature:3537926-3537986:1:exon
so has part: feature:3543460-3543555:1:exon
so has part: feature:3546201-3546390:1:exon
so has part: feature:3546519-3546662:1:exon
so has part: feature:3549843-3549986:1:exon
so has part: feature:3551390-3554839:1:exon

position:3460584:1
position: 3460584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3460584-3460787:1:exon

position:3460787:1
position: 3460787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3484358-3484433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3491453-3491556:1:exon

position:3491453:1
position: 3491453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3491556:1
position: 3491556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3528882-3528960:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3532163-3532244:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3533600-3533680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3533894-3533991:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3537926-3537986:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3543460-3543555:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3546201-3546390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3546519-3546662:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3549843-3549986:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3551390-3554839:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034754771.1
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(3460584..3460787,3484358..3484433,3528882..3528960,3532163..3532244,3533600..3533680,3533894..3533991,3537926..3537986,3543460..3543555,3546201..3546390,3546519..3546662,3549843..3549986,3551390..3554839)
location: region:3460584-3554839:1
so has part: feature:3460584-3460787:1:exon
so has part: feature:3484358-3484433:1:exon
so has part: feature:3528882-3528960:1:exon
so has part: feature:3532163-3532244:1:exon
so has part: feature:3533600-3533680:1:exon
so has part: feature:3533894-3533991:1:exon
so has part: feature:3537926-3537986:1:exon
so has part: feature:3543460-3543555:1:exon
so has part: feature:3546201-3546390:1:exon
so has part: feature:3546519-3546662:1:exon
so has part: feature:3549843-3549986:1:exon
so has part: feature:3551390-3554839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3460584-3460787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3484358-3484433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3528882-3528960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3532163-3532244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3533600-3533680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3533894-3533991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3537926-3537986:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3543460-3543555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3546201-3546390:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3546519-3546662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3549843-3549986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3551390-3554839:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X4
translation: MADSGNAQDSCEVTSSGRDESNSHGVAPPLLIKMINKSRWKMILGLAFFLVMAWYYISREERYIHLFSFPVQDVRMTCPRGEMEKKATLLIGNYTRDHPMFLHLNDYFWVKNRSPYELPYGTKGSEDILLRVLAITSYSVPESIQSMKCRRCAVVGNGHRLRNSSMGEAINKYDVVIRLNNAPVHGYEADVGSKTTMRLFYPESAHFDPRRENNPDTLLVLVPFKPMDFQWLEMILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYFMEITAAKLLNLSMKQPRKIKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEALAIKRMLELGVLKNLTHF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(3491521..3491556,3528882..3528960,3532163..3532244,3533600..3533680,3533894..3533991,3537926..3537986,3543460..3543555,3546201..3546390,3546519..3546662,3549843..3549986,3551390..3551476)
location: region:3491521-3551476:1
so has part: feature:3491521-3491556:1:exon
so has part: feature:3528882-3528960:1:exon
so has part: feature:3532163-3532244:1:exon
so has part: feature:3533600-3533680:1:exon
so has part: feature:3533894-3533991:1:exon
so has part: feature:3537926-3537986:1:exon
so has part: feature:3543460-3543555:1:exon
so has part: feature:3546201-3546390:1:exon
so has part: feature:3546519-3546662:1:exon
so has part: feature:3549843-3549986:1:exon
so has part: feature:3551390-3551476:1:exon

XP_034610661.1
type: Protein
SIO_000068: ncbiprotein

position:3491521:1
position: 3491521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3491521-3491556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3528882-3528960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3532163-3532244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3533600-3533680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3533894-3533991:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3537926-3537986:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3543460-3543555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3546201-3546390:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3546519-3546662:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3549843-3549986:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3551390-3551476:1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X5
translation: MINKSRWKMILGLAFFLVMAWYYISREERYIHLFSFPVQDVRMTCPRGEMEKKATLLIGNYTRDHPMFLHLNDYFWVKNRSPYELPYGTKGSEDILLRVLAITSYSVPESIQSMKCRRCAVVGNGHRLRNSSMGEAINKYDVVIRLNNAPVHGYEADVGSKTTMRLFYPESAHFDPRRENNPDTLLVLVPFKPMDFQWLEMILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYFMEITAAKLLNLSMKQPRKIKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEALAIKRMLELGVLKNLTHF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(3528945..3528960,3532163..3532244,3533600..3533680,3533894..3533991,3537926..3537986,3543460..3543555,3546201..3546390,3546519..3546662,3549843..3549986,3551390..3551476)
location: region:3528945-3551476:1
so has part: feature:3528945-3528960:1:exon
so has part: feature:3532163-3532244:1:exon
so has part: feature:3533600-3533680:1:exon
so has part: feature:3533894-3533991:1:exon
so has part: feature:3537926-3537986:1:exon
so has part: feature:3543460-3543555:1:exon
so has part: feature:3546201-3546390:1:exon
so has part: feature:3546519-3546662:1:exon
so has part: feature:3549843-3549986:1:exon
so has part: feature:3551390-3551476:1:exon

XP_034610662.1
type: Protein
SIO_000068: ncbiprotein

position:3528945:1
position: 3528945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3528945-3528960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3532163-3532244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3533600-3533680:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3533894-3533991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3537926-3537986:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3543460-3543555:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3546201-3546390:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3546519-3546662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3549843-3549986:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3551390-3551476:1:exon

LOC117868639
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868639
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3554933..3597868
location: region:3554933-3597868:1
so has part: feature:3554933-3597868:1:exon
subclass of: SO_0000011

117868639
type: Gene
SIO_000068: ncbigene

position:3554933:1
position: 3554933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3597868:1
position: 3597868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3554933-3597868:1:exon

LOC117868639
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117868639
product: uncharacterized LOC117868639, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004643677.1
SIO_010081: LOC117868639
subclass of: SO_0000673
so part of: LOC117868639
location: join(3554933..3556074,3559082..3559189,3585696..3585828,3586072..3586212,3597751..3597868)
location: region:3554933-3597868:1
so has part: feature:3554933-3556074:1:exon
so has part: feature:3559082-3559189:1:exon
so has part: feature:3585696-3585828:1:exon
so has part: feature:3586072-3586212:1:exon
so has part: feature:3597751-3597868:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3554933-3556074:1:exon

position:3556074:1
position: 3556074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3559082-3559189:1:exon

position:3559082:1
position: 3559082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3559189:1
position: 3559189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3585696-3585828:1:exon

position:3585696:1
position: 3585696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3585828:1
position: 3585828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3586072-3586212:1:exon

position:3586072:1
position: 3586072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3586212:1
position: 3586212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3597751-3597868:1:exon

position:3597751:1
position: 3597751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117868639
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117868639
product: uncharacterized LOC117868639, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004643676.1
SIO_010081: LOC117868639
subclass of: SO_0000673
so part of: LOC117868639
location: join(3554933..3556074,3559082..3559189,3585696..3585828,3586072..3586212,3587900..3588027)
location: region:3554933-3588027:1
so has part: feature:3554933-3556074:1:exon
so has part: feature:3559082-3559189:1:exon
so has part: feature:3585696-3585828:1:exon
so has part: feature:3586072-3586212:1:exon
so has part: feature:3587900-3588027:1:exon

position:3588027:1
position: 3588027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3554933-3556074:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3559082-3559189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3585696-3585828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3586072-3586212:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3587900-3588027:1:exon

position:3587900:1
position: 3587900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KIRREL3
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3573276..4282218)
location: region:3573276-4282218:-1
so has part: feature:3573276-4282218:-1:exon
subclass of: SO_0000010

117868636
type: Gene
SIO_000068: ncbigene

position:3573276:-1
position: 3573276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4282218:-1
position: 4282218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3573276-4282218:-1:exon

KIRREL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: KIRREL3
product: kirre like nephrin family adhesion molecule 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034754766.1
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(3573276..3575297,3581539..3581625,3601356..3601465,3611491..3611598,3624613..3624811,3627733..3627833,3645565..3645691,3657375..3657502,3660768..3660916,3724223..3724328,3747578..3747728,3755652..3755809,3827817..3827966,3832365..3832514,3874903..3874980,4282008..4282218))
location: region:3573276-4282218:-1
so has part: feature:4282008-4282218:-1:exon
so has part: feature:3874903-3874980:-1:exon
so has part: feature:3832365-3832514:-1:exon
so has part: feature:3827817-3827966:-1:exon
so has part: feature:3755652-3755809:-1:exon
so has part: feature:3747578-3747728:-1:exon
so has part: feature:3724223-3724328:-1:exon
so has part: feature:3660768-3660916:-1:exon
so has part: feature:3657375-3657502:-1:exon
so has part: feature:3645565-3645691:-1:exon
so has part: feature:3627733-3627833:-1:exon
so has part: feature:3624613-3624811:-1:exon
so has part: feature:3611491-3611598:-1:exon
so has part: feature:3601356-3601465:-1:exon
so has part: feature:3581539-3581625:-1:exon
so has part: feature:3573276-3575297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4282008-4282218:-1:exon

position:4282008:-1
position: 4282008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3874903-3874980:-1:exon

position:3874903:-1
position: 3874903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3874980:-1
position: 3874980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3832365-3832514:-1:exon

position:3832365:-1
position: 3832365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3832514:-1
position: 3832514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3827817-3827966:-1:exon

position:3827817:-1
position: 3827817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3827966:-1
position: 3827966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3755652-3755809:-1:exon

position:3755652:-1
position: 3755652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3755809:-1
position: 3755809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3747578-3747728:-1:exon

position:3747578:-1
position: 3747578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3747728:-1
position: 3747728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3724223-3724328:-1:exon

position:3724223:-1
position: 3724223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3724328:-1
position: 3724328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3660768-3660916:-1:exon

position:3660768:-1
position: 3660768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3660916:-1
position: 3660916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3657375-3657502:-1:exon

position:3657375:-1
position: 3657375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3657502:-1
position: 3657502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3645565-3645691:-1:exon

position:3645565:-1
position: 3645565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3645691:-1
position: 3645691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3627733-3627833:-1:exon

position:3627733:-1
position: 3627733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3627833:-1
position: 3627833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3624613-3624811:-1:exon

position:3624613:-1
position: 3624613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3624811:-1
position: 3624811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3611491-3611598:-1:exon

position:3611491:-1
position: 3611491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3611598:-1
position: 3611598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3601356-3601465:-1:exon

position:3601356:-1
position: 3601356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3601465:-1
position: 3601465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3581539-3581625:-1:exon

position:3581539:-1
position: 3581539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3581625:-1
position: 3581625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3573276-3575297:-1:exon

position:3575297:-1
position: 3575297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIRREL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: KIRREL3
product: kirre like nephrin family adhesion molecule 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034754765.1
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(3573276..3575297,3581539..3581625,3601356..3601465,3611491..3611598,3622973..3623008,3624613..3624811,3627733..3627833,3645565..3645691,3657375..3657502,3660768..3660916,3724223..3724328,3747578..3747728,3755652..3755809,3827817..3827966,3832365..3832514,3874903..3874980,4282008..4282218))
location: region:3573276-4282218:-1
so has part: feature:4282008-4282218:-1:exon
so has part: feature:3874903-3874980:-1:exon
so has part: feature:3832365-3832514:-1:exon
so has part: feature:3827817-3827966:-1:exon
so has part: feature:3755652-3755809:-1:exon
so has part: feature:3747578-3747728:-1:exon
so has part: feature:3724223-3724328:-1:exon
so has part: feature:3660768-3660916:-1:exon
so has part: feature:3657375-3657502:-1:exon
so has part: feature:3645565-3645691:-1:exon
so has part: feature:3627733-3627833:-1:exon
so has part: feature:3624613-3624811:-1:exon
so has part: feature:3622973-3623008:-1:exon
so has part: feature:3611491-3611598:-1:exon
so has part: feature:3601356-3601465:-1:exon
so has part: feature:3581539-3581625:-1:exon
so has part: feature:3573276-3575297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4282008-4282218:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3874903-3874980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3832365-3832514:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3827817-3827966:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3755652-3755809:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3747578-3747728:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3724223-3724328:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3660768-3660916:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3657375-3657502:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3645565-3645691:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3627733-3627833:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3624613-3624811:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3622973-3623008:-1:exon

position:3622973:-1
position: 3622973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3623008:-1
position: 3623008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3611491-3611598:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3601356-3601465:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3581539-3581625:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3573276-3575297:-1:exon

KIRREL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kin of IRRE-like protein 3 isoform X2
translation: MKAFQADLLLLCCLLFSQELGLPRRGCCLVLGFMYKEKYRRMTEGQASSFTQQPQDQVVVAGQPVTLLCAIPEYNGIVLWIKDGLALGVGRDLSSYPRYLVVGDHLSGEHHLKILRADLQDDAVYECQAIQAAIRSRPARLTVLVPPDDPVITGGPVISLRAGDPLNLTCHADNAKPAASIIWMRNGEVINGATYSKTLLRDGKRESIVSTLFIGPSDIENGQNIVCRATNKAIPSGKETSVTIDIQHPPLVNLSVEPQPVLEDNTVKFHCSAKANPAATQYRWAKKGQVIKEASGDSYETIVDHTFFFEPVSCEVTNALGSTNISRTVDVYFGPRMATEPQSLLVDLGSDAVFSCAWTGNPSLTIVWMKRGSGVVLSNENTLILKSVRQEDAGKYVCRAVVPRVGAGEREVSLTVNGPPIISSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETVSTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQESVPMAVIIGVAVGAGVAFLVLMATIVAFCCARSQRNLKGVVSAKNDIRVEIVHKEPASGRETEEHPTIKQLLMDRGEFQQDSVLKQLEVLKEEEKEFQNLKDPTNGYYSVNTFKDHHSTPTISLSGCQPDLRPANKQRVPTGMSFTNIYTTLSGQNRLYDYSQRFVLGMGSSSIELCEREFQRGSMSDSSSFLDTQCDSSVSSSGKQDGYVQFDKASKASASSSHHSQSSSQNSDPSRPLQRRMQTHV
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(3574854..3575297,3581539..3581625,3601356..3601465,3611491..3611598,3624613..3624811,3627733..3627833,3645565..3645691,3657375..3657502,3660768..3660916,3724223..3724328,3747578..3747728,3755652..3755809,3827817..3827966,3832365..3832514,3874903..3874980,4282008..4282062))
location: region:3574854-4282062:-1
so has part: feature:4282008-4282062:-1:exon
so has part: feature:3874903-3874980:-1:exon
so has part: feature:3832365-3832514:-1:exon
so has part: feature:3827817-3827966:-1:exon
so has part: feature:3755652-3755809:-1:exon
so has part: feature:3747578-3747728:-1:exon
so has part: feature:3724223-3724328:-1:exon
so has part: feature:3660768-3660916:-1:exon
so has part: feature:3657375-3657502:-1:exon
so has part: feature:3645565-3645691:-1:exon
so has part: feature:3627733-3627833:-1:exon
so has part: feature:3624613-3624811:-1:exon
so has part: feature:3611491-3611598:-1:exon
so has part: feature:3601356-3601465:-1:exon
so has part: feature:3581539-3581625:-1:exon
so has part: feature:3574854-3575297:-1:exon

XP_034610657.1
type: Protein
SIO_000068: ncbiprotein

position:3574854:-1
position: 3574854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4282062:-1
position: 4282062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4282008-4282062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3874903-3874980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3832365-3832514:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3827817-3827966:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3755652-3755809:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3747578-3747728:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3724223-3724328:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3660768-3660916:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3657375-3657502:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3645565-3645691:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3627733-3627833:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3624613-3624811:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3611491-3611598:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3601356-3601465:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3581539-3581625:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3574854-3575297:-1:exon

KIRREL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kin of IRRE-like protein 3 isoform X1
translation: MKAFQADLLLLCCLLFSQELGLPRRGCCLVLGFMYKEKYRRMTEGQASSFTQQPQDQVVVAGQPVTLLCAIPEYNGIVLWIKDGLALGVGRDLSSYPRYLVVGDHLSGEHHLKILRADLQDDAVYECQAIQAAIRSRPARLTVLVPPDDPVITGGPVISLRAGDPLNLTCHADNAKPAASIIWMRNGEVINGATYSKTLLRDGKRESIVSTLFIGPSDIENGQNIVCRATNKAIPSGKETSVTIDIQHPPLVNLSVEPQPVLEDNTVKFHCSAKANPAATQYRWAKKGQVIKEASGDSYETIVDHTFFFEPVSCEVTNALGSTNISRTVDVYFGPRMATEPQSLLVDLGSDAVFSCAWTGNPSLTIVWMKRGSGVVLSNENTLILKSVRQEDAGKYVCRAVVPRVGAGEREVSLTVNGPPIISSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETVSTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGTEMKSGAGMEAESVPMAVIIGVAVGAGVAFLVLMATIVAFCCARSQRNLKGVVSAKNDIRVEIVHKEPASGRETEEHPTIKQLLMDRGEFQQDSVLKQLEVLKEEEKEFQNLKDPTNGYYSVNTFKDHHSTPTISLSGCQPDLRPANKQRVPTGMSFTNIYTTLSGQNRLYDYSQRFVLGMGSSSIELCEREFQRGSMSDSSSFLDTQCDSSVSSSGKQDGYVQFDKASKASASSSHHSQSSSQNSDPSRPLQRRMQTHV
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(3574854..3575297,3581539..3581625,3601356..3601465,3611491..3611598,3622973..3623008,3624613..3624811,3627733..3627833,3645565..3645691,3657375..3657502,3660768..3660916,3724223..3724328,3747578..3747728,3755652..3755809,3827817..3827966,3832365..3832514,3874903..3874980,4282008..4282062))
location: region:3574854-4282062:-1
so has part: feature:4282008-4282062:-1:exon
so has part: feature:3874903-3874980:-1:exon
so has part: feature:3832365-3832514:-1:exon
so has part: feature:3827817-3827966:-1:exon
so has part: feature:3755652-3755809:-1:exon
so has part: feature:3747578-3747728:-1:exon
so has part: feature:3724223-3724328:-1:exon
so has part: feature:3660768-3660916:-1:exon
so has part: feature:3657375-3657502:-1:exon
so has part: feature:3645565-3645691:-1:exon
so has part: feature:3627733-3627833:-1:exon
so has part: feature:3624613-3624811:-1:exon
so has part: feature:3622973-3623008:-1:exon
so has part: feature:3611491-3611598:-1:exon
so has part: feature:3601356-3601465:-1:exon
so has part: feature:3581539-3581625:-1:exon
so has part: feature:3574854-3575297:-1:exon

XP_034610656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4282008-4282062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3874903-3874980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3832365-3832514:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3827817-3827966:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3755652-3755809:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3747578-3747728:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3724223-3724328:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3660768-3660916:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3657375-3657502:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3645565-3645691:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3627733-3627833:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3624613-3624811:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3622973-3623008:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3611491-3611598:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3601356-3601465:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3581539-3581625:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3574854-3575297:-1:exon

LOC117868721
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117868721
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4049431..4049549)
location: region:4049431-4049549:-1
so has part: feature:4049431-4049549:-1:exon
subclass of: SO_0000573

117868721
type: Gene
SIO_000068: ncbigene

position:4049431:-1
position: 4049431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4049549:-1
position: 4049549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4049431-4049549:-1:exon

LOC117868721
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 31138
gene: LOC117868721
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004643699.1
SIO_010081: LOC117868721
subclass of: SO_0000673
so part of: LOC117868721
location: complement(4049431..4049549)
location: region:4049431-4049549:-1
so has part: feature:4049431-4049549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4049431-4049549:-1:exon

ETS1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4973077..5095898)
location: region:4973077-5095898:-1
so has part: feature:4973077-5095898:-1:exon
subclass of: SO_0000010

117868507
type: Gene
SIO_000068: ncbigene

position:4973077:-1
position: 4973077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5095898:-1
position: 5095898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4973077-5095898:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034754495.1
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(4973077..4979088,4980093..4980211,4995438..4995698,4999650..4999898,5007662..5007862,5008703..5008822,5078039..5078177,5083919..5084001,5095802..5095898))
location: region:4973077-5095898:-1
so has part: feature:5095802-5095898:-1:exon
so has part: feature:5083919-5084001:-1:exon
so has part: feature:5078039-5078177:-1:exon
so has part: feature:5008703-5008822:-1:exon
so has part: feature:5007662-5007862:-1:exon
so has part: feature:4999650-4999898:-1:exon
so has part: feature:4995438-4995698:-1:exon
so has part: feature:4980093-4980211:-1:exon
so has part: feature:4973077-4979088:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5095802-5095898:-1:exon

position:5095802:-1
position: 5095802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5083919-5084001:-1:exon

position:5083919:-1
position: 5083919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5084001:-1
position: 5084001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5078039-5078177:-1:exon

position:5078039:-1
position: 5078039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5078177:-1
position: 5078177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5008703-5008822:-1:exon

position:5008703:-1
position: 5008703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5008822:-1
position: 5008822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5007662-5007862:-1:exon

position:5007662:-1
position: 5007662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5007862:-1
position: 5007862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4999650-4999898:-1:exon

position:4999650:-1
position: 4999650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4999898:-1
position: 4999898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4995438-4995698:-1:exon

position:4995438:-1
position: 4995438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4995698:-1
position: 4995698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4980093-4980211:-1:exon

position:4980093:-1
position: 4980093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4980211:-1
position: 4980211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4973077-4979088:-1:exon

position:4979088:-1
position: 4979088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_034754494.1
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(4973077..4979088,4980093..4980211,4995438..4995698,4999650..4999898,5001535..5001612,5007662..5007862,5008703..5008822,5078039..5078177,5083919..5083990))
location: region:4973077-5083990:-1
so has part: feature:5083919-5083990:-1:exon
so has part: feature:5078039-5078177:-1:exon
so has part: feature:5008703-5008822:-1:exon
so has part: feature:5007662-5007862:-1:exon
so has part: feature:5001535-5001612:-1:exon
so has part: feature:4999650-4999898:-1:exon
so has part: feature:4995438-4995698:-1:exon
so has part: feature:4980093-4980211:-1:exon
so has part: feature:4973077-4979088:-1:exon

position:5083990:-1
position: 5083990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5083919-5083990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5078039-5078177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5008703-5008822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5007662-5007862:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5001535-5001612:-1:exon

position:5001535:-1
position: 5001535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5001612:-1
position: 5001612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4999650-4999898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4995438-4995698:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4980093-4980211:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4973077-4979088:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_034754493.1
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(4978873..4979088,4980093..4980211,4995438..4995698,4999650..4999898,5001535..5001612,5007662..5007862,5008703..5008822,5078039..5078177,5083919..5084001,5095802..5095898))
location: region:4978873-5095898:-1
so has part: feature:5095802-5095898:-1:exon
so has part: feature:5083919-5084001:-1:exon
so has part: feature:5078039-5078177:-1:exon
so has part: feature:5008703-5008822:-1:exon
so has part: feature:5007662-5007862:-1:exon
so has part: feature:5001535-5001612:-1:exon
so has part: feature:4999650-4999898:-1:exon
so has part: feature:4995438-4995698:-1:exon
so has part: feature:4980093-4980211:-1:exon
so has part: feature:4978873-4979088:-1:exon

position:4978873:-1
position: 4978873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5095802-5095898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5083919-5084001:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5078039-5078177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5008703-5008822:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5007662-5007862:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5001535-5001612:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4999650-4999898:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4995438-4995698:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4980093-4980211:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4978873-4979088:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X2
translation: MMSYYMDTTIGSPAPYPLARPGVMGAANSYEDPWMSCGFQSTCYQQRICYPVWDESTIQEVPTGLERYNSDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKDVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEILQKGYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELFSLKYENDYPSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWNSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(4978873..4979088,4980093..4980211,4995438..4995698,4999650..4999898,5007662..5007862,5008703..5008822,5078039..5078177,5083919..5083990))
location: region:4978873-5083990:-1
so has part: feature:5083919-5083990:-1:exon
so has part: feature:5078039-5078177:-1:exon
so has part: feature:5008703-5008822:-1:exon
so has part: feature:5007662-5007862:-1:exon
so has part: feature:4999650-4999898:-1:exon
so has part: feature:4995438-4995698:-1:exon
so has part: feature:4980093-4980211:-1:exon
so has part: feature:4978873-4979088:-1:exon

XP_034610386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5083919-5083990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5078039-5078177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5008703-5008822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5007662-5007862:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4999650-4999898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4995438-4995698:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4980093-4980211:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4978873-4979088:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X1
translation: MMSYYMDTTIGSPAPYPLARPGVMGAANSYEDPWMSCGFQSTCYQQRICYPVWDESTIQEVPTGLERYNSDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKDVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEILQKDEIKPYSANGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELFSLKYENDYPSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWNSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(4978873..4979088,4980093..4980211,4995438..4995698,4999650..4999898,5001535..5001612,5007662..5007862,5008703..5008822,5078039..5078177,5083919..5083990))
location: region:4978873-5083990:-1
so has part: feature:5083919-5083990:-1:exon
so has part: feature:5078039-5078177:-1:exon
so has part: feature:5008703-5008822:-1:exon
so has part: feature:5007662-5007862:-1:exon
so has part: feature:5001535-5001612:-1:exon
so has part: feature:4999650-4999898:-1:exon
so has part: feature:4995438-4995698:-1:exon
so has part: feature:4980093-4980211:-1:exon
so has part: feature:4978873-4979088:-1:exon

XP_034610384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5083919-5083990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5078039-5078177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5008703-5008822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5007662-5007862:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5001535-5001612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4999650-4999898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4995438-4995698:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4980093-4980211:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4978873-4979088:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X1
translation: MMSYYMDTTIGSPAPYPLARPGVMGAANSYEDPWMSCGFQSTCYQQRICYPVWDESTIQEVPTGLERYNSDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKDVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEILQKDEIKPYSANGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELFSLKYENDYPSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWNSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(4978873..4979088,4980093..4980211,4995438..4995698,4999650..4999898,5001535..5001612,5007662..5007862,5008703..5008822,5078039..5078177,5083919..5083990))
location: region:4978873-5083990:-1
so has part: feature:5083919-5083990:-1:exon
so has part: feature:5078039-5078177:-1:exon
so has part: feature:5008703-5008822:-1:exon
so has part: feature:5007662-5007862:-1:exon
so has part: feature:5001535-5001612:-1:exon
so has part: feature:4999650-4999898:-1:exon
so has part: feature:4995438-4995698:-1:exon
so has part: feature:4980093-4980211:-1:exon
so has part: feature:4978873-4979088:-1:exon

XP_034610385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5083919-5083990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5078039-5078177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5008703-5008822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5007662-5007862:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5001535-5001612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4999650-4999898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4995438-4995698:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4980093-4980211:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4978873-4979088:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_034754496.1
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(4978873..4979088,4980093..4980211,4995438..4995698,4999650..4999898,5001535..5001612,5007662..5007862,5008703..5008822,5078039..5078181,5083919..5083985))
location: region:4978873-5083985:-1
so has part: feature:5083919-5083985:-1:exon
so has part: feature:5078039-5078181:-1:exon
so has part: feature:5008703-5008822:-1:exon
so has part: feature:5007662-5007862:-1:exon
so has part: feature:5001535-5001612:-1:exon
so has part: feature:4999650-4999898:-1:exon
so has part: feature:4995438-4995698:-1:exon
so has part: feature:4980093-4980211:-1:exon
so has part: feature:4978873-4979088:-1:exon

position:5083985:-1
position: 5083985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5083919-5083985:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5078039-5078181:-1:exon

position:5078181:-1
position: 5078181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5008703-5008822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5007662-5007862:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5001535-5001612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4999650-4999898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4995438-4995698:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4980093-4980211:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4978873-4979088:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X3
translation: MSCGFQSTCYQQRICYPVWDESTIQEVPTGLERYNSDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKDVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEILQKDEIKPYSANGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELFSLKYENDYPSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWNSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(4978873..4979088,4980093..4980211,4995438..4995698,4999650..4999898,5001535..5001612,5007662..5007862,5008703..5008822,5078039..5078147))
location: region:4978873-5078147:-1
so has part: feature:5078039-5078147:-1:exon
so has part: feature:5008703-5008822:-1:exon
so has part: feature:5007662-5007862:-1:exon
so has part: feature:5001535-5001612:-1:exon
so has part: feature:4999650-4999898:-1:exon
so has part: feature:4995438-4995698:-1:exon
so has part: feature:4980093-4980211:-1:exon
so has part: feature:4978873-4979088:-1:exon

XP_034610387.1
type: Protein
SIO_000068: ncbiprotein

position:5078147:-1
position: 5078147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5078039-5078147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5008703-5008822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5007662-5007862:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5001535-5001612:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4999650-4999898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4995438-4995698:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4980093-4980211:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4978873-4979088:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034754497.1
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(4978873..4979088,4980093..4980211,4995438..4995698,4999650..4999898,5001535..5001612,5007662..5007862,5008703..5008822,5046555..5047034))
location: region:4978873-5047034:-1
so has part: feature:5046555-5047034:-1:exon
so has part: feature:5008703-5008822:-1:exon
so has part: feature:5007662-5007862:-1:exon
so has part: feature:5001535-5001612:-1:exon
so has part: feature:4999650-4999898:-1:exon
so has part: feature:4995438-4995698:-1:exon
so has part: feature:4980093-4980211:-1:exon
so has part: feature:4978873-4979088:-1:exon

position:5047034:-1
position: 5047034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5046555-5047034:-1:exon

position:5046555:-1
position: 5046555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5008703-5008822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5007662-5007862:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5001535-5001612:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4999650-4999898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4995438-4995698:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4980093-4980211:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4978873-4979088:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X4
translation: MKAAVDLKPTLTIIKTEKVDVDFFPSPDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKDVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEILQKDEIKPYSANGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELFSLKYENDYPSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWNSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(4978873..4979088,4980093..4980211,4995438..4995698,4999650..4999898,5001535..5001612,5007662..5007862,5008703..5008822,5046555..5046636))
location: region:4978873-5046636:-1
so has part: feature:5046555-5046636:-1:exon
so has part: feature:5008703-5008822:-1:exon
so has part: feature:5007662-5007862:-1:exon
so has part: feature:5001535-5001612:-1:exon
so has part: feature:4999650-4999898:-1:exon
so has part: feature:4995438-4995698:-1:exon
so has part: feature:4980093-4980211:-1:exon
so has part: feature:4978873-4979088:-1:exon

XP_034610388.1
type: Protein
SIO_000068: ncbiprotein

position:5046636:-1
position: 5046636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5046555-5046636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5008703-5008822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5007662-5007862:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5001535-5001612:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4999650-4999898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4995438-4995698:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4980093-4980211:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4978873-4979088:-1:exon

FLI1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5163976..5278126
location: region:5163976-5278126:1
so has part: feature:5163976-5278126:1:exon
subclass of: SO_0000010

117868486
type: Gene
SIO_000068: ncbigene

position:5163976:1
position: 5163976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5278126:1
position: 5278126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5163976-5278126:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_034754440.1
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(5163976..5164230,5166370..5166478,5224884..5225095,5236292..5236446,5240345..5240548,5250908..5250976,5271321..5271386,5272672..5272734,5274043..5274090,5275493..5278126)
location: region:5163976-5278126:1
so has part: feature:5163976-5164230:1:exon
so has part: feature:5166370-5166478:1:exon
so has part: feature:5224884-5225095:1:exon
so has part: feature:5236292-5236446:1:exon
so has part: feature:5240345-5240548:1:exon
so has part: feature:5250908-5250976:1:exon
so has part: feature:5271321-5271386:1:exon
so has part: feature:5272672-5272734:1:exon
so has part: feature:5274043-5274090:1:exon
so has part: feature:5275493-5278126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5163976-5164230:1:exon

position:5164230:1
position: 5164230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5166370-5166478:1:exon

position:5166370:1
position: 5166370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5166478:1
position: 5166478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5224884-5225095:1:exon

position:5224884:1
position: 5224884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5225095:1
position: 5225095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5236292-5236446:1:exon

position:5236292:1
position: 5236292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5236446:1
position: 5236446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5240345-5240548:1:exon

position:5240345:1
position: 5240345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5240548:1
position: 5240548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5250908-5250976:1:exon

position:5250908:1
position: 5250908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5250976:1
position: 5250976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5271321-5271386:1:exon

position:5271321:1
position: 5271321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5271386:1
position: 5271386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5272672-5272734:1:exon

position:5272672:1
position: 5272672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5272734:1
position: 5272734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5274043-5274090:1:exon

position:5274043:1
position: 5274043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5274090:1
position: 5274090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5275493-5278126:1:exon

position:5275493:1
position: 5275493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_034754441.1
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(5163976..5164230,5166370..5166451,5224884..5225095,5236292..5236446,5240345..5240548,5250908..5250976,5271321..5271386,5272672..5272734,5274043..5274090,5275493..5278126)
location: region:5163976-5278126:1
so has part: feature:5163976-5164230:1:exon
so has part: feature:5166370-5166451:1:exon
so has part: feature:5224884-5225095:1:exon
so has part: feature:5236292-5236446:1:exon
so has part: feature:5240345-5240548:1:exon
so has part: feature:5250908-5250976:1:exon
so has part: feature:5271321-5271386:1:exon
so has part: feature:5272672-5272734:1:exon
so has part: feature:5274043-5274090:1:exon
so has part: feature:5275493-5278126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5163976-5164230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5166370-5166451:1:exon

position:5166451:1
position: 5166451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5224884-5225095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5236292-5236446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5240345-5240548:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5250908-5250976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5271321-5271386:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5272672-5272734:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5274043-5274090:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5275493-5278126:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034754442.1
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(5164909..5164925,5166370..5166451,5224884..5225095,5236292..5236446,5240345..5240548,5250908..5250976,5271321..5271386,5272672..5272734,5274043..5274090,5275493..5278126)
location: region:5164909-5278126:1
so has part: feature:5164909-5164925:1:exon
so has part: feature:5166370-5166451:1:exon
so has part: feature:5224884-5225095:1:exon
so has part: feature:5236292-5236446:1:exon
so has part: feature:5240345-5240548:1:exon
so has part: feature:5250908-5250976:1:exon
so has part: feature:5271321-5271386:1:exon
so has part: feature:5272672-5272734:1:exon
so has part: feature:5274043-5274090:1:exon
so has part: feature:5275493-5278126:1:exon

position:5164909:1
position: 5164909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5164909-5164925:1:exon

position:5164925:1
position: 5164925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5166370-5166451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5224884-5225095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5236292-5236446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5240345-5240548:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5250908-5250976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5271321-5271386:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5272672-5272734:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5274043-5274090:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5275493-5278126:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X1
translation: MFQTVPDTSSYVKVRHDSIFKQEALSVVSDDQSLFDSTYSAAAHLPKADMTASGNPDYGQPHKINPLPPQQEWINQTVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTSLFQNMDGKELCKMNKEDFLRATSLYNTEVLLSHLSYLRESSSLLVYNTPTHTEPSSRLAAKEDPSYDAVRRAGWGNNMNSSLTKSPPVAGTQTVNKNTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNANCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDLSYMPSYHAHQQKVNFVPPHASSMPVTSSSFFGAAASYWTSPTGSIYPNPNVPRHPNTHVPSHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(5166413..5166478,5224884..5225095,5236292..5236446,5240345..5240548,5250908..5250976,5271321..5271386,5272672..5272734,5274043..5274090,5275493..5276022)
location: region:5166413-5276022:1
so has part: feature:5166413-5166478:1:exon
so has part: feature:5224884-5225095:1:exon
so has part: feature:5236292-5236446:1:exon
so has part: feature:5240345-5240548:1:exon
so has part: feature:5250908-5250976:1:exon
so has part: feature:5271321-5271386:1:exon
so has part: feature:5272672-5272734:1:exon
so has part: feature:5274043-5274090:1:exon
so has part: feature:5275493-5276022:1:exon

XP_034610331.1
type: Protein
SIO_000068: ncbiprotein

position:5166413:1
position: 5166413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5276022:1
position: 5276022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5166413-5166478:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5224884-5225095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5236292-5236446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5240345-5240548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5250908-5250976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5271321-5271386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5272672-5272734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5274043-5274090:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5275493-5276022:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X2
translation: MFQTVPDTSSYVKEALSVVSDDQSLFDSTYSAAAHLPKADMTASGNPDYGQPHKINPLPPQQEWINQTVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTSLFQNMDGKELCKMNKEDFLRATSLYNTEVLLSHLSYLRESSSLLVYNTPTHTEPSSRLAAKEDPSYDAVRRAGWGNNMNSSLTKSPPVAGTQTVNKNTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNANCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDLSYMPSYHAHQQKVNFVPPHASSMPVTSSSFFGAAASYWTSPTGSIYPNPNVPRHPNTHVPSHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(5166413..5166451,5224884..5225095,5236292..5236446,5240345..5240548,5250908..5250976,5271321..5271386,5272672..5272734,5274043..5274090,5275493..5276022)
location: region:5166413-5276022:1
so has part: feature:5166413-5166451:1:exon
so has part: feature:5224884-5225095:1:exon
so has part: feature:5236292-5236446:1:exon
so has part: feature:5240345-5240548:1:exon
so has part: feature:5250908-5250976:1:exon
so has part: feature:5271321-5271386:1:exon
so has part: feature:5272672-5272734:1:exon
so has part: feature:5274043-5274090:1:exon
so has part: feature:5275493-5276022:1:exon

XP_034610332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5166413-5166451:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5224884-5225095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5236292-5236446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5240345-5240548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5250908-5250976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5271321-5271386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5272672-5272734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5274043-5274090:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5275493-5276022:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X2
translation: MFQTVPDTSSYVKEALSVVSDDQSLFDSTYSAAAHLPKADMTASGNPDYGQPHKINPLPPQQEWINQTVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTSLFQNMDGKELCKMNKEDFLRATSLYNTEVLLSHLSYLRESSSLLVYNTPTHTEPSSRLAAKEDPSYDAVRRAGWGNNMNSSLTKSPPVAGTQTVNKNTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNANCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDLSYMPSYHAHQQKVNFVPPHASSMPVTSSSFFGAAASYWTSPTGSIYPNPNVPRHPNTHVPSHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(5166413..5166451,5224884..5225095,5236292..5236446,5240345..5240548,5250908..5250976,5271321..5271386,5272672..5272734,5274043..5274090,5275493..5276022)
location: region:5166413-5276022:1
so has part: feature:5166413-5166451:1:exon
so has part: feature:5224884-5225095:1:exon
so has part: feature:5236292-5236446:1:exon
so has part: feature:5240345-5240548:1:exon
so has part: feature:5250908-5250976:1:exon
so has part: feature:5271321-5271386:1:exon
so has part: feature:5272672-5272734:1:exon
so has part: feature:5274043-5274090:1:exon
so has part: feature:5275493-5276022:1:exon

XP_034610333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5166413-5166451:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5224884-5225095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5236292-5236446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5240345-5240548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5250908-5250976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5271321-5271386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5272672-5272734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5274043-5274090:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5275493-5276022:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034754444.1
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(5176553..5176709,5224884..5225095,5236292..5236446,5240345..5240548,5250908..5250976,5271321..5271386,5272672..5272734,5274043..5274090,5275493..5278126)
location: region:5176553-5278126:1
so has part: feature:5176553-5176709:1:exon
so has part: feature:5224884-5225095:1:exon
so has part: feature:5236292-5236446:1:exon
so has part: feature:5240345-5240548:1:exon
so has part: feature:5250908-5250976:1:exon
so has part: feature:5271321-5271386:1:exon
so has part: feature:5272672-5272734:1:exon
so has part: feature:5274043-5274090:1:exon
so has part: feature:5275493-5278126:1:exon

position:5176553:1
position: 5176553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5176553-5176709:1:exon

position:5176709:1
position: 5176709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5224884-5225095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5236292-5236446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5240345-5240548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5250908-5250976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5271321-5271386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5272672-5272734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5274043-5274090:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5275493-5278126:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_034754443.1
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(5178079..5178534,5224884..5225095,5236292..5236446,5240345..5240548,5250908..5250976,5271321..5271386,5272672..5272734,5274043..5274090,5275493..5278126)
location: region:5178079-5278126:1
so has part: feature:5178079-5178534:1:exon
so has part: feature:5224884-5225095:1:exon
so has part: feature:5236292-5236446:1:exon
so has part: feature:5240345-5240548:1:exon
so has part: feature:5250908-5250976:1:exon
so has part: feature:5271321-5271386:1:exon
so has part: feature:5272672-5272734:1:exon
so has part: feature:5274043-5274090:1:exon
so has part: feature:5275493-5278126:1:exon

position:5178079:1
position: 5178079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5178079-5178534:1:exon

position:5178534:1
position: 5178534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5224884-5225095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5236292-5236446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5240345-5240548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5250908-5250976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5271321-5271386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5272672-5272734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5274043-5274090:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5275493-5278126:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X3
translation: MDGTIKEALSVVSDDQSLFDSTYSAAAHLPKADMTASGNPDYGQPHKINPLPPQQEWINQTVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTSLFQNMDGKELCKMNKEDFLRATSLYNTEVLLSHLSYLRESSSLLVYNTPTHTEPSSRLAAKEDPSYDAVRRAGWGNNMNSSLTKSPPVAGTQTVNKNTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNANCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDLSYMPSYHAHQQKVNFVPPHASSMPVTSSSFFGAAASYWTSPTGSIYPNPNVPRHPNTHVPSHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(5178517..5178534,5224884..5225095,5236292..5236446,5240345..5240548,5250908..5250976,5271321..5271386,5272672..5272734,5274043..5274090,5275493..5276022)
location: region:5178517-5276022:1
so has part: feature:5178517-5178534:1:exon
so has part: feature:5224884-5225095:1:exon
so has part: feature:5236292-5236446:1:exon
so has part: feature:5240345-5240548:1:exon
so has part: feature:5250908-5250976:1:exon
so has part: feature:5271321-5271386:1:exon
so has part: feature:5272672-5272734:1:exon
so has part: feature:5274043-5274090:1:exon
so has part: feature:5275493-5276022:1:exon

XP_034610334.1
type: Protein
SIO_000068: ncbiprotein

position:5178517:1
position: 5178517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5178517-5178534:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5224884-5225095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5236292-5236446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5240345-5240548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5250908-5250976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5271321-5271386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5272672-5272734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5274043-5274090:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5275493-5276022:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X4
translation: MTASGNPDYGQPHKINPLPPQQEWINQTVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTSLFQNMDGKELCKMNKEDFLRATSLYNTEVLLSHLSYLRESSSLLVYNTPTHTEPSSRLAAKEDPSYDAVRRAGWGNNMNSSLTKSPPVAGTQTVNKNTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNANCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDLSYMPSYHAHQQKVNFVPPHASSMPVTSSSFFGAAASYWTSPTGSIYPNPNVPRHPNTHVPSHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(5224965..5225095,5236292..5236446,5240345..5240548,5250908..5250976,5271321..5271386,5272672..5272734,5274043..5274090,5275493..5276022)
location: region:5224965-5276022:1
so has part: feature:5224965-5225095:1:exon
so has part: feature:5236292-5236446:1:exon
so has part: feature:5240345-5240548:1:exon
so has part: feature:5250908-5250976:1:exon
so has part: feature:5271321-5271386:1:exon
so has part: feature:5272672-5272734:1:exon
so has part: feature:5274043-5274090:1:exon
so has part: feature:5275493-5276022:1:exon

XP_034610335.1
type: Protein
SIO_000068: ncbiprotein

position:5224965:1
position: 5224965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5224965-5225095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5236292-5236446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5240345-5240548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5250908-5250976:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5271321-5271386:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5272672-5272734:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5274043-5274090:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5275493-5276022:1:exon

KCNJ1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: KCNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5291491..5293018)
location: region:5291491-5293018:-1
so has part: feature:5291491-5293018:-1:exon
subclass of: SO_0000010

117868592
type: Gene
SIO_000068: ncbigene

position:5291491:-1
position: 5291491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5293018:-1
position: 5293018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5291491-5293018:-1:exon

KCNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: KCNJ1
product: potassium inwardly rectifying channel subfamily J member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034754681.1
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: complement(5291491..5293018)
location: region:5291491-5293018:-1
so has part: feature:5291491-5293018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5291491-5293018:-1:exon

KCNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: KCNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-sensitive inward rectifier potassium channel 1
translation: MFKYFRKRFASHLTERSRRRARLVSKDGRCNIEFGNVEEQSRFVFLVDIWTTILDLRWRYKMTIFISAFLGSWFLFGLLWYVVAYIHKDLPEFSPSINHTPCVENINGLTSAFLFSLETQVTIGYGFRCVTEQCATAIFLLIFQSILGVIINSFMCGAILAKISRSKKRAKTITFSKNAVISKRGGKLCLLIRVANLRKSLLIGSHIYGKLLKTTITPEGETIILDQVNIDFVVDAGNENLFFISPLTIYHVIDRTSPFFRMSVETILQQDFELVVFLDGTVEATSATCQVRTSYIPEEVLWGYRFAPIVSKTKEGKYRVDFHNFSKTVEVETPHCAFCLYNEKDAKAKAKRGYDNPGFILSEVNETSDTKM
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: complement(5291892..5293010)
location: region:5291892-5293010:-1
so has part: feature:5291892-5293010:-1:exon

XP_034610572.1
type: Protein
SIO_000068: ncbiprotein

position:5291892:-1
position: 5291892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5293010:-1
position: 5293010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5291892-5293010:-1:exon

KCNJ5
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5340373..5424293
location: region:5340373-5424293:1
so has part: feature:5340373-5424293:1:exon
subclass of: SO_0000010

117868623
type: Gene
SIO_000068: ncbigene

position:5340373:1
position: 5340373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5424293:1
position: 5424293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5340373-5424293:1:exon

KCNJ5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: KCNJ5
product: potassium inwardly rectifying channel subfamily J member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034754745.1
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(5340373..5340834,5350601..5351547,5424146..5424293)
location: region:5340373-5424293:1
so has part: feature:5340373-5340834:1:exon
so has part: feature:5350601-5351547:1:exon
so has part: feature:5424146-5424293:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5340373-5340834:1:exon

position:5340834:1
position: 5340834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5350601-5351547:1:exon

position:5350601:1
position: 5350601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5351547:1
position: 5351547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5424146-5424293:1:exon

position:5424146:1
position: 5424146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNJ5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: KCNJ5
product: potassium inwardly rectifying channel subfamily J member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_034754744.1
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(5340374..5340834,5350601..5351547,5370367..5371801)
location: region:5340374-5371801:1
so has part: feature:5340374-5340834:1:exon
so has part: feature:5350601-5351547:1:exon
so has part: feature:5370367-5371801:1:exon

position:5340374:1
position: 5340374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5371801:1
position: 5371801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5340374-5340834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5350601-5351547:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5370367-5371801:1:exon

position:5370367:1
position: 5370367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNJ5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4 isoform X2
translation: MAGDSRIFMNQDMEIGVTPMDPKKFPRQPRDYVPIATDRTRLLAAEIKKPRQRYMEKSGKCNVHHGNVHETYRYLSDLFTTLVDLKWRFNLLVFTMVYTVTWLFFGFIWWLIAYIRGDLDHLEDENWIPCVENLSGFVSAFLFSIETETTIGYGYRVITEKCPEGIILLLIQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNNAVISIRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHEINEKSPFWEMSRAQLEKEEFEIVVILEGMVEATA
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(5350608..5351547,5424146..5424150)
location: region:5350608-5424150:1
so has part: feature:5350608-5351547:1:exon
so has part: feature:5424146-5424150:1:exon

XP_034610636.1
type: Protein
SIO_000068: ncbiprotein

position:5350608:1
position: 5350608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5424150:1
position: 5424150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5350608-5351547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5424146-5424150:1:exon

KCNJ5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4 isoform X1
translation: MAGDSRIFMNQDMEIGVTPMDPKKFPRQPRDYVPIATDRTRLLAAEIKKPRQRYMEKSGKCNVHHGNVHETYRYLSDLFTTLVDLKWRFNLLVFTMVYTVTWLFFGFIWWLIAYIRGDLDHLEDENWIPCVENLSGFVSAFLFSIETETTIGYGYRVITEKCPEGIILLLIQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNNAVISIRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHEINEKSPFWEMSRAQLEKEEFEIVVILEGMVEATGMTCQARSSYMDTEVLWGHRFTPVLTLEKDFYEVDYNSFHCTYETNTPSCCAKELAQSFQEGRLLRHLSSATLLSGGGEAETAKEEQEVEEEGREVAGLNGANGTAEVKADMSV
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(5350608..5351547,5370367..5370710)
location: region:5350608-5370710:1
so has part: feature:5350608-5351547:1:exon
so has part: feature:5370367-5370710:1:exon

XP_034610635.1
type: Protein
SIO_000068: ncbiprotein

position:5370710:1
position: 5370710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5350608-5351547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5370367-5370710:1:exon

ARHGAP32
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: ARHGAP32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5469086..5736358)
location: region:5469086-5736358:-1
so has part: feature:5469086-5736358:-1:exon
subclass of: SO_0000010

117868517
type: Gene
SIO_000068: ncbigene

position:5469086:-1
position: 5469086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5736358:-1
position: 5736358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5469086-5736358:-1:exon

ARHGAP32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ARHGAP32
product: Rho GTPase activating protein 32, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034754531.1
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: complement(join(5469086..5473397,5474726..5475702,5476351..5477214,5479151..5479225,5481054..5481199,5481931..5482132,5486093..5486238,5487628..5487735,5490968..5491050,5491848..5491992,5493600..5493702,5514135..5514284,5553171..5553252,5565016..5565093,5567088..5567210,5574784..5574876,5577562..5577699,5604360..5604446,5660501..5660585,5662097..5662188,5690955..5691063,5736276..5736358))
location: region:5469086-5736358:-1
so has part: feature:5736276-5736358:-1:exon
so has part: feature:5690955-5691063:-1:exon
so has part: feature:5662097-5662188:-1:exon
so has part: feature:5660501-5660585:-1:exon
so has part: feature:5604360-5604446:-1:exon
so has part: feature:5577562-5577699:-1:exon
so has part: feature:5574784-5574876:-1:exon
so has part: feature:5567088-5567210:-1:exon
so has part: feature:5565016-5565093:-1:exon
so has part: feature:5553171-5553252:-1:exon
so has part: feature:5514135-5514284:-1:exon
so has part: feature:5493600-5493702:-1:exon
so has part: feature:5491848-5491992:-1:exon
so has part: feature:5490968-5491050:-1:exon
so has part: feature:5487628-5487735:-1:exon
so has part: feature:5486093-5486238:-1:exon
so has part: feature:5481931-5482132:-1:exon
so has part: feature:5481054-5481199:-1:exon
so has part: feature:5479151-5479225:-1:exon
so has part: feature:5476351-5477214:-1:exon
so has part: feature:5474726-5475702:-1:exon
so has part: feature:5469086-5473397:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5736276-5736358:-1:exon

position:5736276:-1
position: 5736276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5690955-5691063:-1:exon

position:5690955:-1
position: 5690955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5691063:-1
position: 5691063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5662097-5662188:-1:exon

position:5662097:-1
position: 5662097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5662188:-1
position: 5662188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5660501-5660585:-1:exon

position:5660501:-1
position: 5660501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5660585:-1
position: 5660585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5604360-5604446:-1:exon

position:5604360:-1
position: 5604360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5604446:-1
position: 5604446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5577562-5577699:-1:exon

position:5577562:-1
position: 5577562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5577699:-1
position: 5577699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5574784-5574876:-1:exon

position:5574784:-1
position: 5574784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5574876:-1
position: 5574876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5567088-5567210:-1:exon

position:5567088:-1
position: 5567088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5567210:-1
position: 5567210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5565016-5565093:-1:exon

position:5565016:-1
position: 5565016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5565093:-1
position: 5565093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5553171-5553252:-1:exon

position:5553171:-1
position: 5553171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5553252:-1
position: 5553252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5514135-5514284:-1:exon

position:5514135:-1
position: 5514135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5514284:-1
position: 5514284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5493600-5493702:-1:exon

position:5493600:-1
position: 5493600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5493702:-1
position: 5493702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5491848-5491992:-1:exon

position:5491848:-1
position: 5491848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5491992:-1
position: 5491992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5490968-5491050:-1:exon

position:5490968:-1
position: 5490968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5491050:-1
position: 5491050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5487628-5487735:-1:exon

position:5487628:-1
position: 5487628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5487735:-1
position: 5487735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5486093-5486238:-1:exon

position:5486093:-1
position: 5486093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5486238:-1
position: 5486238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5481931-5482132:-1:exon

position:5481931:-1
position: 5481931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5482132:-1
position: 5482132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5481054-5481199:-1:exon

position:5481054:-1
position: 5481054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5481199:-1
position: 5481199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5479151-5479225:-1:exon

position:5479151:-1
position: 5479151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5479225:-1
position: 5479225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5476351-5477214:-1:exon

position:5476351:-1
position: 5476351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5477214:-1
position: 5477214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5474726-5475702:-1:exon

position:5474726:-1
position: 5474726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5475702:-1
position: 5475702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5469086-5473397:-1:exon

position:5473397:-1
position: 5473397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ARHGAP32
product: Rho GTPase activating protein 32, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034754532.1
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: complement(join(5469086..5473397,5474726..5475702,5476351..5477214,5479151..5479225,5481054..5481199,5481931..5482132,5486093..5486238,5487628..5487735,5490968..5491050,5491848..5491992,5493600..5493702,5514135..5514284,5528819..5528930))
location: region:5469086-5528930:-1
so has part: feature:5528819-5528930:-1:exon
so has part: feature:5514135-5514284:-1:exon
so has part: feature:5493600-5493702:-1:exon
so has part: feature:5491848-5491992:-1:exon
so has part: feature:5490968-5491050:-1:exon
so has part: feature:5487628-5487735:-1:exon
so has part: feature:5486093-5486238:-1:exon
so has part: feature:5481931-5482132:-1:exon
so has part: feature:5481054-5481199:-1:exon
so has part: feature:5479151-5479225:-1:exon
so has part: feature:5476351-5477214:-1:exon
so has part: feature:5474726-5475702:-1:exon
so has part: feature:5469086-5473397:-1:exon

position:5528930:-1
position: 5528930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5528819-5528930:-1:exon

position:5528819:-1
position: 5528819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5514135-5514284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5493600-5493702:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5491848-5491992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5490968-5491050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5487628-5487735:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5486093-5486238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5481931-5482132:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5481054-5481199:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5479151-5479225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5476351-5477214:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5474726-5475702:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5469086-5473397:-1:exon

ARHGAP32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ARHGAP32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 32 isoform X1
translation: MMKSSVHTEEDDFVPELQRSIHPRERPDWEETLSAMARGADIPEIPGELPLRTCGSTASMKVKNVKKLSFTKGHFPKMAECAHFHYENVDFGNIQLSLPEEQNEVTRNGCESKELVYLVQISCQGKSWIVKRSYEDFRVLDKHLHLCIYDRRFSQLSELPRSDALKDSPELVTQMLMAYLSRLSAIAGNKINCGPALTWMEIDNKGNHLLVHEESSINVPAIAAAHVIKRYIAQAADELSFEVGDIVSVIDMPPKELTTWWRGKHGFQVGFFPSECVELINDKVPQSMTNSVPKPVSKKHGKLITFLRTFMKSRPTKQKLKQRGILKERVFGCDLGEHLLNSGHDVPQVLKSCTEFIEKHGIVDGIYRLSGIASNIQKLRHEFDSEQIPDLTKDVYIQDIHCVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLVKIHDVIQQLPPPHYRTLEFLMRHLAHLADYCSITNMHTKNLAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHVDVLFSSKLSSVIRDGAGHTSLSRPKSLLVSSPSTKLLTLEEAQARTQAQINSPIVADSKYIEVGEGPAALQGKFHTVIDFPSERKRPPNKMKKSPVGSWRSFFNLGKSSSVSKRKLQRNPSEPSEMKAIALAGGRGDSGTLRSAKSEESLTSLHAVDGESKLFRPRRPRSSSDALSASFNGELLGTMNRCNSYDNLPHDNESDGDEGLIHVPALISPRSAEDVDLSPPDIGVASLDFDPMSFQCSPPKAESECMASSISLLESMGFNRDKPSVAKKDLESGSQSQTPGSATSSEPVSPFQEKMSPFFTLDLSPTEEKESKTHSFSEKVAHAFSPKTGRKPIKSPLVTISEPVSLTLPRQACEGMPSAAGNAASPNWSKSVNEATDRSPTQRMSLSLKASEMAAGEGCHQEAQTQVTAAKPELQEEGERPMPSSQNKTVPSGHTQPGAVALDSPQDPVPVSSVSLIPPPPPKNAARMLALALAESAQQASTQSQKKPGDAHSDCTNYRETDIGIAIEKVHLSAGAAPDKLHLYTDVPENQIHFQSGAPGDQLQSGAPVDQDLTRTPGDRSHLHRSTPGNRDQPHLHTGMPGDLHSGTKVDWNHSNFHTGTVGDEDHFPSHSGGPGDWEHTPLHTGALLSREPSTTDVPIDQPHLHTCISMDKYHIPVEKLHVPASTADDKLQPPPVAAREKTAMATMTYMTTTQTPATEMSHGTAGQHMASEPTAQADVIVTAAQRILMTNSLAPSQRQADHQPAMGQVPAVATKGSSSSNQVRGAPPPEKPPEPRLAEPAPVFVTESSSAIRCTSSTSASHQGHLEKSRENVRAPSLHLRSELVPTHSSYGFAPPIPPVRTLESKIAAAMHSNSMDAVNTSTYHSFLASSILPSSVEEALPPPPPPKHASLQSAYLPHPKPESIPEPPMSENYLHHKPASVHQYRPESVPPHLSYHGKSDQHQAYASRSETPTSMGPRYTAYASQGKNTSAHHSKPRNRVEYASSMSPTTLRSTGYAEEPPPYPTIRRVQSLHVSTPSTIRSVPISRTEVPPDDEPVYCPRPLYQYKPCQPHSDYHVTQLQPYFENGRVHYRYSPYSSSSGSSYYPTAADGGFYDLDPYSTMRLRHFHPLPSRDFASYTSRLQNKNLYRYPGLPAYPRGGLMSHLAGKEHSFISRDVPPAPDIKHTYMSWDLEDMEKYRLQSIRRESRSRQKVKGPVMSQYDNVTPLLQEELGGLDIIHLRSKSDPGKTGLLTVAEGKEGRYPTKAATPEGDERYYLQRSEPEPDRSHYHGAYGNGQSEKPSLPQKQSSIRSRKLHEPGCNATEHRGHLQQEASHRQPSESKNGPPYPDYRPKGGQEPMEPVGFQHAGGKYVTAGQEALRPNHKEVKLAEDRPDLERPRARQIAPAEKHTRDCYNKEEEHHVQPMAPPPKPERSHSLRLRHPESMDRDPGLLYPYQTLGKRQSSLTVVSQYDNLEDYHTMPQHQRG…
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: complement(join(5471139..5473397,5474726..5475702,5476351..5477214,5479151..5479225,5481054..5481199,5481931..5482132,5486093..5486238,5487628..5487735,5490968..5491050,5491848..5491992,5493600..5493702,5514135..5514284,5553171..5553252,5565016..5565093,5567088..5567210,5574784..5574876,5577562..5577699,5604360..5604446,5660501..5660585,5662097..5662188,5690955..5691062))
location: region:5471139-5691062:-1
so has part: feature:5690955-5691062:-1:exon
so has part: feature:5662097-5662188:-1:exon
so has part: feature:5660501-5660585:-1:exon
so has part: feature:5604360-5604446:-1:exon
so has part: feature:5577562-5577699:-1:exon
so has part: feature:5574784-5574876:-1:exon
so has part: feature:5567088-5567210:-1:exon
so has part: feature:5565016-5565093:-1:exon
so has part: feature:5553171-5553252:-1:exon
so has part: feature:5514135-5514284:-1:exon
so has part: feature:5493600-5493702:-1:exon
so has part: feature:5491848-5491992:-1:exon
so has part: feature:5490968-5491050:-1:exon
so has part: feature:5487628-5487735:-1:exon
so has part: feature:5486093-5486238:-1:exon
so has part: feature:5481931-5482132:-1:exon
so has part: feature:5481054-5481199:-1:exon
so has part: feature:5479151-5479225:-1:exon
so has part: feature:5476351-5477214:-1:exon
so has part: feature:5474726-5475702:-1:exon
so has part: feature:5471139-5473397:-1:exon

XP_034610422.1
type: Protein
SIO_000068: ncbiprotein

position:5471139:-1
position: 5471139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5691062:-1
position: 5691062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5690955-5691062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5662097-5662188:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5660501-5660585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5604360-5604446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5577562-5577699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5574784-5574876:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5567088-5567210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5565016-5565093:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5553171-5553252:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5514135-5514284:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5493600-5493702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5491848-5491992:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5490968-5491050:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5487628-5487735:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5486093-5486238:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5481931-5482132:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5481054-5481199:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5479151-5479225:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5476351-5477214:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5474726-5475702:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5471139-5473397:-1:exon

ARHGAP32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ARHGAP32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 32 isoform X2
translation: MKSRPTKQKLKQRGILKERVFGCDLGEHLLNSGHDVPQVLKSCTEFIEKHGIVDGIYRLSGIASNIQKLRHEFDSEQIPDLTKDVYIQDIHCVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLVKIHDVIQQLPPPHYRTLEFLMRHLAHLADYCSITNMHTKNLAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHVDVLFSSKLSSVIRDGAGHTSLSRPKSLLVSSPSTKLLTLEEAQARTQAQINSPIVADSKYIEVGEGPAALQGKFHTVIDFPSERKRPPNKMKKSPVGSWRSFFNLGKSSSVSKRKLQRNPSEPSEMKAIALAGGRGDSGTLRSAKSEESLTSLHAVDGESKLFRPRRPRSSSDALSASFNGELLGTMNRCNSYDNLPHDNESDGDEGLIHVPALISPRSAEDVDLSPPDIGVASLDFDPMSFQCSPPKAESECMASSISLLESMGFNRDKPSVAKKDLESGSQSQTPGSATSSEPVSPFQEKMSPFFTLDLSPTEEKESKTHSFSEKVAHAFSPKTGRKPIKSPLVTISEPVSLTLPRQACEGMPSAAGNAASPNWSKSVNEATDRSPTQRMSLSLKASEMAAGEGCHQEAQTQVTAAKPELQEEGERPMPSSQNKTVPSGHTQPGAVALDSPQDPVPVSSVSLIPPPPPKNAARMLALALAESAQQASTQSQKKPGDAHSDCTNYRETDIGIAIEKVHLSAGAAPDKLHLYTDVPENQIHFQSGAPGDQLQSGAPVDQDLTRTPGDRSHLHRSTPGNRDQPHLHTGMPGDLHSGTKVDWNHSNFHTGTVGDEDHFPSHSGGPGDWEHTPLHTGALLSREPSTTDVPIDQPHLHTCISMDKYHIPVEKLHVPASTADDKLQPPPVAAREKTAMATMTYMTTTQTPATEMSHGTAGQHMASEPTAQADVIVTAAQRILMTNSLAPSQRQADHQPAMGQVPAVATKGSSSSNQVRGAPPPEKPPEPRLAEPAPVFVTESSSAIRCTSSTSASHQGHLEKSRENVRAPSLHLRSELVPTHSSYGFAPPIPPVRTLESKIAAAMHSNSMDAVNTSTYHSFLASSILPSSVEEALPPPPPPKHASLQSAYLPHPKPESIPEPPMSENYLHHKPASVHQYRPESVPPHLSYHGKSDQHQAYASRSETPTSMGPRYTAYASQGKNTSAHHSKPRNRVEYASSMSPTTLRSTGYAEEPPPYPTIRRVQSLHVSTPSTIRSVPISRTEVPPDDEPVYCPRPLYQYKPCQPHSDYHVTQLQPYFENGRVHYRYSPYSSSSGSSYYPTAADGGFYDLDPYSTMRLRHFHPLPSRDFASYTSRLQNKNLYRYPGLPAYPRGGLMSHLAGKEHSFISRDVPPAPDIKHTYMSWDLEDMEKYRLQSIRRESRSRQKVKGPVMSQYDNVTPLLQEELGGLDIIHLRSKSDPGKTGLLTVAEGKEGRYPTKAATPEGDERYYLQRSEPEPDRSHYHGAYGNGQSEKPSLPQKQSSIRSRKLHEPGCNATEHRGHLQQEASHRQPSESKNGPPYPDYRPKGGQEPMEPVGFQHAGGKYVTAGQEALRPNHKEVKLAEDRPDLERPRARQIAPAEKHTRDCYNKEEEHHVQPMAPPPKPERSHSLRLRHPESMDRDPGLLYPYQTLGKRQSSLTVVSQYDNLEDYHTMPQHQRGGYLGGGAFMPPGFPHSHSRTYATALGQGAFLPSELCLQRPETEIHAE
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: complement(join(5471139..5473397,5474726..5475702,5476351..5477214,5479151..5479225,5481054..5481199,5481931..5482132,5486093..5486238,5487628..5487735,5490968..5491050,5491848..5491992,5493600..5493702,5514135..5514240))
location: region:5471139-5514240:-1
so has part: feature:5514135-5514240:-1:exon
so has part: feature:5493600-5493702:-1:exon
so has part: feature:5491848-5491992:-1:exon
so has part: feature:5490968-5491050:-1:exon
so has part: feature:5487628-5487735:-1:exon
so has part: feature:5486093-5486238:-1:exon
so has part: feature:5481931-5482132:-1:exon
so has part: feature:5481054-5481199:-1:exon
so has part: feature:5479151-5479225:-1:exon
so has part: feature:5476351-5477214:-1:exon
so has part: feature:5474726-5475702:-1:exon
so has part: feature:5471139-5473397:-1:exon

XP_034610423.1
type: Protein
SIO_000068: ncbiprotein

position:5514240:-1
position: 5514240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5514135-5514240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5493600-5493702:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5491848-5491992:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5490968-5491050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5487628-5487735:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5486093-5486238:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5481931-5482132:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5481054-5481199:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5479151-5479225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5476351-5477214:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5474726-5475702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5471139-5473397:-1:exon

BARX2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: BARX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5932072..5983865
location: region:5932072-5983865:1
so has part: feature:5932072-5983865:1:exon
subclass of: SO_0000010