Trachemys scripta elegans isolate TJP31775 chromosome 18, CAS_Tse_1.0, whole genome shotgun sequence.
type: Entry
definition: Trachemys scripta elegans isolate TJP31775 chromosome 18, CAS_Tse_1.0, whole genome shotgun sequence.
sequence version: NC_048315.1
sequence date: 2020-05-31
sequence: sequence
division: CON
label: NC_048315.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA634151
dblink: SAMN12189062
keyword: WGS
keyword: RefSeq
source: Trachemys scripta elegans
organism: Trachemys scripta elegans
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys.
reference: 1
references: 32227195
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM023073.1.\nAssembly name: CAS_Tse_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the California Academy of\nSciences on 2020/05/15. The original whole-genome shotgun project\nhas the accession VIRI00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: California Academy of Sciences\nAssembly Date :: 15-JUN-2019\nAssembly Method :: Supernova v. 1.2\nAssembly Name :: CAS_Tse_1.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina NovaSeq; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Trachemys scripta elegans Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 24772400
topology: linear
so has quality: SO_0000987
location: 1..24772400
location: region:1-24772400:1
RO_0002162: 31138

NC_048315
type: RefSeq
SIO_000068: refseq

PRJNA634151
type: BioProject
SIO_000068: bioproject

SAMN12189062
type: BioSample
SIO_000068: biosample

1
title: An Annotated Chromosome-Level Reference Genome of the Red-Eared Slider Turtle (Trachemys scripta elegans)
author: Brian Simison, W.
author: Parham, J.F.
author: Papenfuss, T.J.
author: Lam, A.W.
author: Henderson, J.B.
journal: Genome Biol Evol
volume: 12
issue: 4
pages: 456-462
year: 2020
pubmed: 32227195

32227195
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24772400:1
position: 24772400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-24772400:1:source
so part of: sequence
organism: Trachemys scripta elegans
mol type: genomic DNA
isolate: TJP31775
isolation source: river
sub species: elegans
chromosome: 18
country: USA
collection date: 14-Feb-2018

31138
type: Taxonomy
SIO_000068: taxonomy

CRK
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: CRK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5163..56880
location: region:5163-56880:1
so has part: feature:5163-56880:1:exon
subclass of: SO_0000010

117867301
type: Gene
SIO_000068: ncbigene

position:5163:1
position: 5163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56880:1
position: 56880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5163-56880:1:exon

CRK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CRK
product: CRK proto-oncogene, adaptor protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_034752181.1
SIO_010081: CRK
subclass of: SO_0000673
so part of: CRK
location: join(5163..5345,33948..34483,53471..56880)
location: region:5163-56880:1
so has part: feature:5163-5345:1:exon
so has part: feature:33948-34483:1:exon
so has part: feature:53471-56880:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5163-5345:1:exon

position:5345:1
position: 5345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33948-34483:1:exon

position:33948:1
position: 33948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34483:1
position: 34483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:53471-56880:1:exon

position:53471:1
position: 53471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CRK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adapter molecule crk isoform X2
translation: MTSPDCRLFPSSGSVSVVTSGLNPSRFRIGDQEFDSLPSLLEFYKIHYLDTTTLIEPVSKSKQNSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSDGKRGMIPVPYVEKYRPSSASVSTLIGGNQDSSHPQPLGGPEPGPYAQPSINTPLPNLQNGPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGECNGKRGHFPFTHVRLLDQQNPDEDFS
SIO_010081: CRK
subclass of: SO_0000673
so part of: CRK
location: join(5285..5345,33948..34483,53471..53608)
location: region:5285-53608:1
so has part: feature:5285-5345:1:exon
so has part: feature:33948-34483:1:exon
so has part: feature:53471-53608:1:exon

XP_034608072.1
type: Protein
SIO_000068: ncbiprotein

position:5285:1
position: 5285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53608:1
position: 53608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5285-5345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33948-34483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53471-53608:1:exon

CRK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CRK
product: CRK proto-oncogene, adaptor protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_034752180.1
SIO_010081: CRK
subclass of: SO_0000673
so part of: CRK
location: join(5355..5708,33948..34483,53471..56880)
location: region:5355-56880:1
so has part: feature:5355-5708:1:exon
so has part: feature:33948-34483:1:exon
so has part: feature:53471-56880:1:exon

position:5355:1
position: 5355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5355-5708:1:exon

position:5708:1
position: 5708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33948-34483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53471-56880:1:exon

CRK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CRK
product: CRK proto-oncogene, adaptor protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_034752182.1
SIO_010081: CRK
subclass of: SO_0000673
so part of: CRK
location: join(5355..5708,33948..34313,53471..53614)
location: region:5355-53614:1
so has part: feature:5355-5708:1:exon
so has part: feature:33948-34313:1:exon
so has part: feature:53471-53614:1:exon

position:53614:1
position: 53614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5355-5708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33948-34313:1:exon

position:34313:1
position: 34313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:53471-53614:1:exon

CRK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CRK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adapter molecule crk isoform X1
translation: MAGQFDSEDRASWYWGRLSRAEAVSLLQGQRHGTFLVRDSGTIPGDFVLSVSESSRVSHYIVNSLGTAGGRRPGGEGQGAPGLNPSRFRIGDQEFDSLPSLLEFYKIHYLDTTTLIEPVSKSKQNSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSDGKRGMIPVPYVEKYRPSSASVSTLIGGNQDSSHPQPLGGPEPGPYAQPSINTPLPNLQNGPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGECNGKRGHFPFTHVRLLDQQNPDEDFS
SIO_010081: CRK
subclass of: SO_0000673
so part of: CRK
location: join(5465..5708,33948..34483,53471..53608)
location: region:5465-53608:1
so has part: feature:5465-5708:1:exon
so has part: feature:33948-34483:1:exon
so has part: feature:53471-53608:1:exon

XP_034608071.1
type: Protein
SIO_000068: ncbiprotein

position:5465:1
position: 5465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5465-5708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33948-34483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53471-53608:1:exon

CRK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CRK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adapter molecule crk isoform X3
translation: MAGQFDSEDRASWYWGRLSRAEAVSLLQGQRHGTFLVRDSGTIPGDFVLSVSESSRVSHYIVNSLGTAGGRRPGGEGQGAPGLNPSRFRIGDQEFDSLPSLLEFYKIHYLDTTTLIEPVSKSKQNSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSDGKRGMIPVPYVEKYRPSSASVSTLIGGR
SIO_010081: CRK
subclass of: SO_0000673
so part of: CRK
location: join(5465..5708,33948..34313,53471..53478)
location: region:5465-53478:1
so has part: feature:5465-5708:1:exon
so has part: feature:33948-34313:1:exon
so has part: feature:53471-53478:1:exon

XP_034608073.1
type: Protein
SIO_000068: ncbiprotein

position:53478:1
position: 53478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5465-5708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33948-34313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53471-53478:1:exon

YWHAE
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: YWHAE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 66399..148719
location: region:66399-148719:1
so has part: feature:66399-148719:1:exon
subclass of: SO_0000010

117867358
type: Gene
SIO_000068: ncbigene

position:66399:1
position: 66399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148719:1
position: 148719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66399-148719:1:exon

YWHAE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: YWHAE
product: tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 76 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_034752277.1
SIO_010081: YWHAE
subclass of: SO_0000673
so part of: YWHAE
location: join(66399..66586,89595..89794,120054..120160,122203..122409,130301..130437,146730..146776,148641..148719)
location: region:66399-148719:1
so has part: feature:66399-66586:1:exon
so has part: feature:89595-89794:1:exon
so has part: feature:120054-120160:1:exon
so has part: feature:122203-122409:1:exon
so has part: feature:130301-130437:1:exon
so has part: feature:146730-146776:1:exon
so has part: feature:148641-148719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66399-66586:1:exon

position:66586:1
position: 66586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:89595-89794:1:exon

position:89595:1
position: 89595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89794:1
position: 89794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:120054-120160:1:exon

position:120054:1
position: 120054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120160:1
position: 120160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:122203-122409:1:exon

position:122203:1
position: 122203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122409:1
position: 122409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:130301-130437:1:exon

position:130301:1
position: 130301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130437:1
position: 130437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:146730-146776:1:exon

position:146730:1
position: 146730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146776:1
position: 146776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:148641-148719:1:exon

position:148641:1
position: 148641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YWHAE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: YWHAE
product: tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 76 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_034752276.1
SIO_010081: YWHAE
subclass of: SO_0000673
so part of: YWHAE
location: join(66399..66586,89595..89794,120054..120160,122203..122409,130301..130437,148641..148719)
location: region:66399-148719:1
so has part: feature:66399-66586:1:exon
so has part: feature:89595-89794:1:exon
so has part: feature:120054-120160:1:exon
so has part: feature:122203-122409:1:exon
so has part: feature:130301-130437:1:exon
so has part: feature:148641-148719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66399-66586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89595-89794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120054-120160:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122203-122409:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130301-130437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148641-148719:1:exon

YWHAE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: YWHAE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 14-3-3 protein epsilon isoform X1
translation: MDDREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNKEALQDVEDENQ
SIO_010081: YWHAE
subclass of: SO_0000673
so part of: YWHAE
location: join(66523..66586,89595..89794,120054..120160,122203..122409,130301..130437,148641..148693)
location: region:66523-148693:1
so has part: feature:66523-66586:1:exon
so has part: feature:89595-89794:1:exon
so has part: feature:120054-120160:1:exon
so has part: feature:122203-122409:1:exon
so has part: feature:130301-130437:1:exon
so has part: feature:148641-148693:1:exon

XP_034608167.1
type: Protein
SIO_000068: ncbiprotein

position:66523:1
position: 66523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148693:1
position: 148693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66523-66586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89595-89794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120054-120160:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122203-122409:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130301-130437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148641-148693:1:exon

YWHAE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: YWHAE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 14-3-3 protein epsilon isoform X2
translation: MDDREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDDS
SIO_010081: YWHAE
subclass of: SO_0000673
so part of: YWHAE
location: join(66523..66586,89595..89794,120054..120160,122203..122409,130301..130437,146730..146737)
location: region:66523-146737:1
so has part: feature:66523-66586:1:exon
so has part: feature:89595-89794:1:exon
so has part: feature:120054-120160:1:exon
so has part: feature:122203-122409:1:exon
so has part: feature:130301-130437:1:exon
so has part: feature:146730-146737:1:exon

XP_034608168.1
type: Protein
SIO_000068: ncbiprotein

position:146737:1
position: 146737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66523-66586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89595-89794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120054-120160:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122203-122409:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130301-130437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:146730-146737:1:exon

MYO1C
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: MYO1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(155623..265784)
location: region:155623-265784:-1
so has part: feature:155623-265784:-1:exon
subclass of: SO_0000010

117867702
type: Gene
SIO_000068: ncbigene

position:155623:-1
position: 155623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265784:-1
position: 265784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155623-265784:-1:exon

MYO1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: MYO1C
product: myosin IC, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_034752926.1
SIO_010081: MYO1C
subclass of: SO_0000673
so part of: MYO1C
location: complement(join(155623..155845,157177..157276,164622..164719,165517..165587,167035..167170,167993..168048,168166..168259,174532..174615,175740..175899,176738..176822,177054..177122,177262..177338,177513..177626,184070..184187,188528..188633,188848..188928,189250..189296,189548..189642,192269..192360,197162..197242,198871..198976,199745..199827,200109..200228,200522..200593,207073..207186,207422..207520,207886..208065,211351..211431,212228..212426,216892..217007,218276..218431,265643..265784))
location: region:155623-265784:-1
so has part: feature:265643-265784:-1:exon
so has part: feature:218276-218431:-1:exon
so has part: feature:216892-217007:-1:exon
so has part: feature:212228-212426:-1:exon
so has part: feature:211351-211431:-1:exon
so has part: feature:207886-208065:-1:exon
so has part: feature:207422-207520:-1:exon
so has part: feature:207073-207186:-1:exon
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urn:…
SIO_000300: 1
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urn:…
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urn:…
SIO_000300: 3
SIO_000628: feature:216892-217007:-1:exon

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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 10
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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:198871-198976:-1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:197162-197242:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:192269-192360:-1:exon

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urn:…
SIO_000300: 15
SIO_000628: feature:189548-189642:-1:exon

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urn:…
SIO_000300: 16
SIO_000628: feature:189250-189296:-1:exon

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SIO_000300: 17
SIO_000628: feature:188848-188928:-1:exon

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SIO_000300: 18
SIO_000628: feature:188528-188633:-1:exon

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SIO_000300: 19
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SIO_000300: 20
SIO_000628: feature:177513-177626:-1:exon

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urn:…
SIO_000300: 21
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SIO_000300: 22
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urn:…
SIO_000300: 23
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SIO_000300: 24
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SIO_000300: 25
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SIO_000300: 26
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SIO_000300: 27
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SIO_000300: 28
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SIO_000300: 29
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urn:…
SIO_000300: 30
SIO_000628: feature:164622-164719:-1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:157177-157276:-1:exon

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urn:…
SIO_000300: 32
SIO_000628: feature:155623-155845:-1:exon

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reference: sequence
type: ReverseStrandPosition
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MYO1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: MYO1C
product: myosin IC, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_034752925.1
SIO_010081: MYO1C
subclass of: SO_0000673
so part of: MYO1C
location: complement(join(155623..155845,157177..157276,164622..164719,165517..165587,167035..167170,167993..168048,168166..168259,174532..174615,175740..175899,176738..176822,177054..177122,177262..177338,177513..177626,184070..184187,188528..188633,188848..188928,189250..189296,189548..189642,192269..192360,197162..197242,198871..198976,199745..199827,200109..200228,200522..200593,207073..207186,207422..207520,207886..208065,211351..211431,212228..212426,216892..217007,218276..218431,237571..237736))
location: region:155623-237736:-1
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position:237736:-1
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SIO_000300: 1
SIO_000628: feature:237571-237736:-1:exon

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urn:…
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SIO_000300: 5
SIO_000628: feature:211351-211431:-1:exon

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SIO_000300: 6
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SIO_000628: feature:207422-207520:-1:exon

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SIO_000300: 8
SIO_000628: feature:207073-207186:-1:exon

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SIO_000300: 9
SIO_000628: feature:200522-200593:-1:exon

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SIO_000628: feature:199745-199827:-1:exon

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SIO_000300: 12
SIO_000628: feature:198871-198976:-1:exon

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SIO_000300: 13
SIO_000628: feature:197162-197242:-1:exon

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SIO_000628: feature:189548-189642:-1:exon

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SIO_000300: 16
SIO_000628: feature:189250-189296:-1:exon

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SIO_000300: 17
SIO_000628: feature:188848-188928:-1:exon

urn:…
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SIO_000628: feature:188528-188633:-1:exon

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SIO_000300: 19
SIO_000628: feature:184070-184187:-1:exon

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SIO_000300: 20
SIO_000628: feature:177513-177626:-1:exon

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SIO_000300: 21
SIO_000628: feature:177262-177338:-1:exon

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SIO_000300: 22
SIO_000628: feature:177054-177122:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:176738-176822:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:175740-175899:-1:exon

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SIO_000300: 25
SIO_000628: feature:174532-174615:-1:exon

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SIO_000300: 26
SIO_000628: feature:168166-168259:-1:exon

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SIO_000300: 27
SIO_000628: feature:167993-168048:-1:exon

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SIO_000300: 28
SIO_000628: feature:167035-167170:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:165517-165587:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:164622-164719:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:157177-157276:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:155623-155845:-1:exon

MYO1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: MYO1C
product: myosin IC, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_034752927.1
SIO_010081: MYO1C
subclass of: SO_0000673
so part of: MYO1C
location: complement(join(155623..155845,157177..157276,164622..164719,165517..165587,167035..167170,167993..168048,168166..168259,174532..174615,175740..175899,176738..176822,177054..177122,177262..177338,177513..177626,184070..184187,188528..188633,188848..188928,189250..189296,189548..189642,192269..192360,197162..197242,198871..198976,199745..199827,200109..200228,200522..200593,207073..207186,207422..207520,207886..208065,211351..211431,212228..212426,216881..217007))
location: region:155623-217007:-1
so has part: feature:216881-217007:-1:exon
so has part: feature:212228-212426:-1:exon
so has part: feature:211351-211431:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:216881-217007:-1:exon

position:216881:-1
position: 216881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:212228-212426:-1:exon

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SIO_000300: 9
SIO_000628: feature:199745-199827:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:198871-198976:-1:exon

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SIO_000300: 11
SIO_000628: feature:197162-197242:-1:exon

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SIO_000628: feature:192269-192360:-1:exon

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SIO_000628: feature:189548-189642:-1:exon

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SIO_000628: feature:174532-174615:-1:exon

urn:…
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SIO_000628: feature:168166-168259:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:167993-168048:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:167035-167170:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:165517-165587:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:164622-164719:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:157177-157276:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:155623-155845:-1:exon

MYO1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: MYO1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-Ic isoform X1
translation: MKFRAGAAGSDGIRLTMESALTARDRVGVQDFVLLENFTSEAAFIENLRKRFKENLIYTYIGSVLVSVNPYKDLEIYSKQHMERYRGVSFYEVSPHLYAIADNSYRSLRIERKDQCILISGESGAGKTEATKKILQYYAVTCPASDQVETVKDRLLQSNPVLEAFGNAKTLRNDNSSRFGKYMDVQFDYKGAPVGGHILNYLLEKSRVVHQNHGERNFHIFYQLLEGGEDDLLRRLGLEKNPQQYHYLVKGQCARVSSISDKNDWKVVRRALSVINFNDNEIEDLLSIVASVLHLGNVQFAADEQGNAQVTTENQIKYLARLLGVEGSVLREALIHKTIIAKGEELVSPLNLEQAAYARDALAKAVYGRTFSWLVNKINKSLAYKEAECPGWRSATVLGLLDIYGFEVFQHNSFEQFCINYCNEKLQQLFIELTLKSEQEEYESEGIAWEPVQYFNNKIICDLVEEKFKGIISILDEECLRPGDATDMTFLEKLEETVKNHPHFLTHKLADQKTRKSLGREEFRLLHYAGEVTYSVTGFLDKNNDLLFRNLKEAMCNSENPIINHCFERTELTDKKRPETAATQFKNSLSKLMEILMSKEPSYIRCIKPNDAKQAGRFDEVLIRHQVKYLGLMENVRVRRAGFAYRRKYEIFLQRYKSLCSETWPTWEGRPHDGVAVLVKHLGYKQEEYKMGRTKIFIRFPKTLFATEDALEIRKQSLATKIQATWRGFYWRQKFLHKKHSAITIQSWWRGTQGRRIATKKKWAVETIRRFIKGFIYRNYPRCSENEYFLDYIRYSFLMNLKRNLPKNVLDKSWPTPPPSLCEVSQLLRQLCMQNMVWSYCKRISPEWKQQLDQKVVASEMFKGKKDNYPQSVPRLFINTRLGTEEINPKVLQVLGNETIKYAVPVVKYDRKGYKARVRQLLLTQNAIFIVEEAKIKQRIDYANLTGISVSSLSDSLFVLHVSCEDNKQKGDVVLQSDHVIETLTKTAMSADKINNVNISQGSIKFTIGQGKEGIIDFTSGSELLIAKAKNGHLAVVAPRLNSR
SIO_010081: MYO1C
subclass of: SO_0000673
so part of: MYO1C
location: complement(join(155819..155845,157177..157276,164622..164719,165517..165587,167035..167170,167993..168048,168166..168259,174532..174615,175740..175899,176738..176822,177054..177122,177262..177338,177513..177626,184070..184187,188528..188633,188848..188928,189250..189296,189548..189642,192269..192360,197162..197242,198871..198976,199745..199827,200109..200228,200522..200593,207073..207186,207422..207520,207886..208065,211351..211431,212228..212426,216892..217007,218276..218431,237571..237588))
location: region:155819-237588:-1
so has part: feature:237571-237588:-1:exon
so has part: feature:218276-218431:-1:exon
so has part: feature:216892-217007:-1:exon
so has part: feature:212228-212426:-1:exon
so has part: feature:211351-211431:-1:exon
so has part: feature:207886-208065:-1:exon
so has part: feature:207422-207520:-1:exon
so has part: feature:207073-207186:-1:exon
so has part: feature:200522-200593:-1:exon
so has part: feature:200109-200228:-1:exon
so has part: feature:199745-199827:-1:exon
so has part: feature:198871-198976:-1:exon
so has part: feature:197162-197242:-1:exon
so has part: feature:192269-192360:-1:exon
so has part: feature:189548-189642:-1:exon
so has part: feature:189250-189296:-1:exon
so has part: feature:188848-188928:-1:exon
so has part: feature:188528-188633:-1:exon
so has part: feature:184070-184187:-1:exon
so has part: feature:177513-177626:-1:exon
so has part: feature:177262-177338:-1:exon
so has part: feature:177054-177122:-1:exon
so has part: feature:176738-176822:-1:exon
so has part: feature:175740-175899:-1:exon
so has part: feature:174532-174615:-1:exon
so has part: feature:168166-168259:-1:exon
so has part: feature:167993-168048:-1:exon
so has part: feature:167035-167170:-1:exon
so has part: feature:165517-165587:-1:exon
so has part: feature:164622-164719:-1:exon
so has part: feature:157177-157276:-1:exon
so has part: feature:155819-155845:-1:exon

XP_034608816.1
type: Protein
SIO_000068: ncbiprotein

position:155819:-1
position: 155819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237588:-1
position: 237588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237571-237588:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218276-218431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216892-217007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212228-212426:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211351-211431:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207886-208065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207422-207520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:207073-207186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200522-200593:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200109-200228:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:199745-199827:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:198871-198976:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:197162-197242:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:192269-192360:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:189548-189642:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:189250-189296:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:188848-188928:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:188528-188633:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:184070-184187:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:177513-177626:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:177262-177338:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:177054-177122:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:176738-176822:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:175740-175899:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:174532-174615:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:168166-168259:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:167993-168048:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:167035-167170:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:165517-165587:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:164622-164719:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:157177-157276:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:155819-155845:-1:exon

MYO1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: MYO1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-Ic isoform X2
translation: MESALTARDRVGVQDFVLLENFTSEAAFIENLRKRFKENLIYTYIGSVLVSVNPYKDLEIYSKQHMERYRGVSFYEVSPHLYAIADNSYRSLRIERKDQCILISGESGAGKTEATKKILQYYAVTCPASDQVETVKDRLLQSNPVLEAFGNAKTLRNDNSSRFGKYMDVQFDYKGAPVGGHILNYLLEKSRVVHQNHGERNFHIFYQLLEGGEDDLLRRLGLEKNPQQYHYLVKGQCARVSSISDKNDWKVVRRALSVINFNDNEIEDLLSIVASVLHLGNVQFAADEQGNAQVTTENQIKYLARLLGVEGSVLREALIHKTIIAKGEELVSPLNLEQAAYARDALAKAVYGRTFSWLVNKINKSLAYKEAECPGWRSATVLGLLDIYGFEVFQHNSFEQFCINYCNEKLQQLFIELTLKSEQEEYESEGIAWEPVQYFNNKIICDLVEEKFKGIISILDEECLRPGDATDMTFLEKLEETVKNHPHFLTHKLADQKTRKSLGREEFRLLHYAGEVTYSVTGFLDKNNDLLFRNLKEAMCNSENPIINHCFERTELTDKKRPETAATQFKNSLSKLMEILMSKEPSYIRCIKPNDAKQAGRFDEVLIRHQVKYLGLMENVRVRRAGFAYRRKYEIFLQRYKSLCSETWPTWEGRPHDGVAVLVKHLGYKQEEYKMGRTKIFIRFPKTLFATEDALEIRKQSLATKIQATWRGFYWRQKFLHKKHSAITIQSWWRGTQGRRIATKKKWAVETIRRFIKGFIYRNYPRCSENEYFLDYIRYSFLMNLKRNLPKNVLDKSWPTPPPSLCEVSQLLRQLCMQNMVWSYCKRISPEWKQQLDQKVVASEMFKGKKDNYPQSVPRLFINTRLGTEEINPKVLQVLGNETIKYAVPVVKYDRKGYKARVRQLLLTQNAIFIVEEAKIKQRIDYANLTGISVSSLSDSLFVLHVSCEDNKQKGDVVLQSDHVIETLTKTAMSADKINNVNISQGSIKFTIGQGKEGIIDFTSGSELLIAKAKNGHLAVVAPRLNSR
SIO_010081: MYO1C
subclass of: SO_0000673
so part of: MYO1C
location: complement(join(155819..155845,157177..157276,164622..164719,165517..165587,167035..167170,167993..168048,168166..168259,174532..174615,175740..175899,176738..176822,177054..177122,177262..177338,177513..177626,184070..184187,188528..188633,188848..188928,189250..189296,189548..189642,192269..192360,197162..197242,198871..198976,199745..199827,200109..200228,200522..200593,207073..207186,207422..207520,207886..208065,211351..211431,212228..212426,216892..217007,218276..218401))
location: region:155819-218401:-1
so has part: feature:218276-218401:-1:exon
so has part: feature:216892-217007:-1:exon
so has part: feature:212228-212426:-1:exon
so has part: feature:211351-211431:-1:exon
so has part: feature:207886-208065:-1:exon
so has part: feature:207422-207520:-1:exon
so has part: feature:207073-207186:-1:exon
so has part: feature:200522-200593:-1:exon
so has part: feature:200109-200228:-1:exon
so has part: feature:199745-199827:-1:exon
so has part: feature:198871-198976:-1:exon
so has part: feature:197162-197242:-1:exon
so has part: feature:192269-192360:-1:exon
so has part: feature:189548-189642:-1:exon
so has part: feature:189250-189296:-1:exon
so has part: feature:188848-188928:-1:exon
so has part: feature:188528-188633:-1:exon
so has part: feature:184070-184187:-1:exon
so has part: feature:177513-177626:-1:exon
so has part: feature:177262-177338:-1:exon
so has part: feature:177054-177122:-1:exon
so has part: feature:176738-176822:-1:exon
so has part: feature:175740-175899:-1:exon
so has part: feature:174532-174615:-1:exon
so has part: feature:168166-168259:-1:exon
so has part: feature:167993-168048:-1:exon
so has part: feature:167035-167170:-1:exon
so has part: feature:165517-165587:-1:exon
so has part: feature:164622-164719:-1:exon
so has part: feature:157177-157276:-1:exon
so has part: feature:155819-155845:-1:exon

XP_034608817.1
type: Protein
SIO_000068: ncbiprotein

position:218401:-1
position: 218401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218276-218401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216892-217007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212228-212426:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211351-211431:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207886-208065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207422-207520:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207073-207186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:200522-200593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200109-200228:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199745-199827:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:198871-198976:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:197162-197242:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:192269-192360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:189548-189642:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:189250-189296:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:188848-188928:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:188528-188633:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184070-184187:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:177513-177626:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:177262-177338:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:177054-177122:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:176738-176822:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:175740-175899:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:174532-174615:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:168166-168259:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:167993-168048:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:167035-167170:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:165517-165587:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:164622-164719:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:157177-157276:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:155819-155845:-1:exon

MYO1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: MYO1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-Ic isoform X3
translation: MDVQFDYKGAPVGGHILNYLLEKSRVVHQNHGERNFHIFYQLLEGGEDDLLRRLGLEKNPQQYHYLVKGQCARVSSISDKNDWKVVRRALSVINFNDNEIEDLLSIVASVLHLGNVQFAADEQGNAQVTTENQIKYLARLLGVEGSVLREALIHKTIIAKGEELVSPLNLEQAAYARDALAKAVYGRTFSWLVNKINKSLAYKEAECPGWRSATVLGLLDIYGFEVFQHNSFEQFCINYCNEKLQQLFIELTLKSEQEEYESEGIAWEPVQYFNNKIICDLVEEKFKGIISILDEECLRPGDATDMTFLEKLEETVKNHPHFLTHKLADQKTRKSLGREEFRLLHYAGEVTYSVTGFLDKNNDLLFRNLKEAMCNSENPIINHCFERTELTDKKRPETAATQFKNSLSKLMEILMSKEPSYIRCIKPNDAKQAGRFDEVLIRHQVKYLGLMENVRVRRAGFAYRRKYEIFLQRYKSLCSETWPTWEGRPHDGVAVLVKHLGYKQEEYKMGRTKIFIRFPKTLFATEDALEIRKQSLATKIQATWRGFYWRQKFLHKKHSAITIQSWWRGTQGRRIATKKKWAVETIRRFIKGFIYRNYPRCSENEYFLDYIRYSFLMNLKRNLPKNVLDKSWPTPPPSLCEVSQLLRQLCMQNMVWSYCKRISPEWKQQLDQKVVASEMFKGKKDNYPQSVPRLFINTRLGTEEINPKVLQVLGNETIKYAVPVVKYDRKGYKARVRQLLLTQNAIFIVEEAKIKQRIDYANLTGISVSSLSDSLFVLHVSCEDNKQKGDVVLQSDHVIETLTKTAMSADKINNVNISQGSIKFTIGQGKEGIIDFTSGSELLIAKAKNGHLAVVAPRLNSR
SIO_010081: MYO1C
subclass of: SO_0000673
so part of: MYO1C
location: complement(join(155819..155845,157177..157276,164622..164719,165517..165587,167035..167170,167993..168048,168166..168259,174532..174615,175740..175899,176738..176822,177054..177122,177262..177338,177513..177626,184070..184187,188528..188633,188848..188928,189250..189296,189548..189642,192269..192360,197162..197242,198871..198976,199745..199827,200109..200228,200522..200593,207073..207186,207422..207520,207886..208065,211351..211374))
location: region:155819-211374:-1
so has part: feature:211351-211374:-1:exon
so has part: feature:207886-208065:-1:exon
so has part: feature:207422-207520:-1:exon
so has part: feature:207073-207186:-1:exon
so has part: feature:200522-200593:-1:exon
so has part: feature:200109-200228:-1:exon
so has part: feature:199745-199827:-1:exon
so has part: feature:198871-198976:-1:exon
so has part: feature:197162-197242:-1:exon
so has part: feature:192269-192360:-1:exon
so has part: feature:189548-189642:-1:exon
so has part: feature:189250-189296:-1:exon
so has part: feature:188848-188928:-1:exon
so has part: feature:188528-188633:-1:exon
so has part: feature:184070-184187:-1:exon
so has part: feature:177513-177626:-1:exon
so has part: feature:177262-177338:-1:exon
so has part: feature:177054-177122:-1:exon
so has part: feature:176738-176822:-1:exon
so has part: feature:175740-175899:-1:exon
so has part: feature:174532-174615:-1:exon
so has part: feature:168166-168259:-1:exon
so has part: feature:167993-168048:-1:exon
so has part: feature:167035-167170:-1:exon
so has part: feature:165517-165587:-1:exon
so has part: feature:164622-164719:-1:exon
so has part: feature:157177-157276:-1:exon
so has part: feature:155819-155845:-1:exon

XP_034608818.1
type: Protein
SIO_000068: ncbiprotein

position:211374:-1
position: 211374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211351-211374:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207886-208065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207422-207520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207073-207186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200522-200593:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:200109-200228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199745-199827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198871-198976:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:197162-197242:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192269-192360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:189548-189642:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:189250-189296:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:188848-188928:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:188528-188633:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:184070-184187:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:177513-177626:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:177262-177338:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:177054-177122:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:176738-176822:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:175740-175899:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:174532-174615:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:168166-168259:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:167993-168048:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:167035-167170:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:165517-165587:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:164622-164719:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:157177-157276:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:155819-155845:-1:exon

LOC117867704
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117867704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 157273..164628
location: region:157273-164628:1
so has part: feature:157273-164628:1:exon
subclass of: SO_0000011

117867704
type: Gene
SIO_000068: ncbigene

position:157273:1
position: 157273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164628:1
position: 164628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157273-164628:1:exon

LOC117867704
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117867704
product: uncharacterized LOC117867704, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004643470.1
SIO_010081: LOC117867704
subclass of: SO_0000673
so part of: LOC117867704
location: join(157273..160093,160449..160521,162332..164628)
location: region:157273-164628:1
so has part: feature:157273-160093:1:exon
so has part: feature:160449-160521:1:exon
so has part: feature:162332-164628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157273-160093:1:exon

position:160093:1
position: 160093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160449-160521:1:exon

position:160449:1
position: 160449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160521:1
position: 160521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:162332-164628:1:exon

position:162332:1
position: 162332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117867704
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117867704
product: uncharacterized LOC117867704, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_004643468.1
SIO_010081: LOC117867704
subclass of: SO_0000673
so part of: LOC117867704
location: join(157273..160093,160449..160521,161772..161990)
location: region:157273-161990:1
so has part: feature:157273-160093:1:exon
so has part: feature:160449-160521:1:exon
so has part: feature:161772-161990:1:exon

position:161990:1
position: 161990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157273-160093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160449-160521:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161772-161990:1:exon

position:161772:1
position: 161772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117867704
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117867704
product: uncharacterized LOC117867704, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004643469.1
SIO_010081: LOC117867704
subclass of: SO_0000673
so part of: LOC117867704
location: join(157273..159135,159561..160093,160449..160521,161772..161990)
location: region:157273-161990:1
so has part: feature:157273-159135:1:exon
so has part: feature:159561-160093:1:exon
so has part: feature:160449-160521:1:exon
so has part: feature:161772-161990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157273-159135:1:exon

position:159135:1
position: 159135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:159561-160093:1:exon

position:159561:1
position: 159561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:160449-160521:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161772-161990:1:exon

LOC117867704
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117867704
product: uncharacterized LOC117867704, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004643471.1
SIO_010081: LOC117867704
subclass of: SO_0000673
so part of: LOC117867704
location: join(157273..158175,158412..160093,160449..160521,161772..161990)
location: region:157273-161990:1
so has part: feature:157273-158175:1:exon
so has part: feature:158412-160093:1:exon
so has part: feature:160449-160521:1:exon
so has part: feature:161772-161990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157273-158175:1:exon

position:158175:1
position: 158175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158412-160093:1:exon

position:158412:1
position: 158412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:160449-160521:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161772-161990:1:exon

LOC117867707
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117867707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 165868..168295
location: region:165868-168295:1
so has part: feature:165868-168295:1:exon
subclass of: SO_0000011

117867707
type: Gene
SIO_000068: ncbigene

position:165868:1
position: 165868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168295:1
position: 168295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165868-168295:1:exon

LOC117867707
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117867707
product: uncharacterized LOC117867707
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004643473.1
SIO_010081: LOC117867707
subclass of: SO_0000673
so part of: LOC117867707
location: join(165868..166089,166955..168295)
location: region:165868-168295:1
so has part: feature:165868-166089:1:exon
so has part: feature:166955-168295:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165868-166089:1:exon

position:166089:1
position: 166089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:166955-168295:1:exon

position:166955:1
position: 166955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117867705
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117867705
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 290942..327731
location: region:290942-327731:1
so has part: feature:290942-327731:1:exon
subclass of: SO_0000011

117867705
type: Gene
SIO_000068: ncbigene

position:290942:1
position: 290942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327731:1
position: 327731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290942-327731:1:exon

LOC117867705
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117867705
product: uncharacterized LOC117867705
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004643472.1
SIO_010081: LOC117867705
subclass of: SO_0000673
so part of: LOC117867705
location: join(290942..290997,324708..324771,327586..327731)
location: region:290942-327731:1
so has part: feature:290942-290997:1:exon
so has part: feature:324708-324771:1:exon
so has part: feature:327586-327731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290942-290997:1:exon

position:290997:1
position: 290997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:324708-324771:1:exon

position:324708:1
position: 324708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324771:1
position: 324771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327586-327731:1:exon

position:327586:1
position: 327586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INPP5K
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: INPP5K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(302973..335330)
location: region:302973-335330:-1
so has part: feature:302973-335330:-1:exon
subclass of: SO_0000010

117867703
type: Gene
SIO_000068: ncbigene

position:302973:-1
position: 302973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335330:-1
position: 335330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302973-335330:-1:exon

INPP5K
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: INPP5K
product: inositol polyphosphate-5-phosphatase K, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_034752931.1
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(302973..305208,307792..307896,309904..309987,310609..310746,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,333772..333846,335279..335330))
location: region:302973-335330:-1
so has part: feature:335279-335330:-1:exon
so has part: feature:333772-333846:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:302973-305208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335279-335330:-1:exon

position:335279:-1
position: 335279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333772-333846:-1:exon

position:333772:-1
position: 333772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333846:-1
position: 333846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327273-327380:-1:exon

position:327273:-1
position: 327273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327380:-1
position: 327380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326298-326406:-1:exon

position:326298:-1
position: 326298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326406:-1
position: 326406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:324222-324338:-1:exon

position:324222:-1
position: 324222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324338:-1
position: 324338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:323654-323829:-1:exon

position:323654:-1
position: 323654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323829:-1
position: 323829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:320510-320621:-1:exon

position:320510:-1
position: 320510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320621:-1
position: 320621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:319745-319854:-1:exon

position:319745:-1
position: 319745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319854:-1
position: 319854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:315947-315973:-1:exon

position:315947:-1
position: 315947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315973:-1
position: 315973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:313809-314001:-1:exon

position:313809:-1
position: 313809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314001:-1
position: 314001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:310609-310746:-1:exon

position:310609:-1
position: 310609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310746:-1
position: 310746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:309904-309987:-1:exon

position:309904:-1
position: 309904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309987:-1
position: 309987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:307792-307896:-1:exon

position:307792:-1
position: 307792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307896:-1
position: 307896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:302973-305208:-1:exon

position:305208:-1
position: 305208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

INPP5K
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: INPP5K
product: inositol polyphosphate-5-phosphatase K, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034752930.1
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(302973..305208,307792..307896,309904..309987,310609..310746,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,333772..333849,335279..335294))
location: region:302973-335294:-1
so has part: feature:335279-335294:-1:exon
so has part: feature:333772-333849:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:302973-305208:-1:exon

position:335294:-1
position: 335294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335279-335294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333772-333849:-1:exon

position:333849:-1
position: 333849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327273-327380:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315947-315973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:302973-305208:-1:exon

INPP5K
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: INPP5K
product: inositol polyphosphate-5-phosphatase K, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034752933.1
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(302973..305208,307792..307896,309904..309987,310609..310746,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,333772..333849,335270..335285))
location: region:302973-335285:-1
so has part: feature:335270-335285:-1:exon
so has part: feature:333772-333849:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:302973-305208:-1:exon

position:335285:-1
position: 335285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335270-335285:-1:exon

position:335270:-1
position: 335270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333772-333849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327273-327380:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315947-315973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:302973-305208:-1:exon

INPP5K
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: INPP5K
product: inositol polyphosphate-5-phosphatase K, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_034752934.1
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(302973..305208,307792..307896,309904..309987,310609..310746,313809..314001,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,333772..333846,335080..335272))
location: region:302973-335272:-1
so has part: feature:335080-335272:-1:exon
so has part: feature:333772-333846:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:302973-305208:-1:exon

position:335272:-1
position: 335272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335080-335272:-1:exon

position:335080:-1
position: 335080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333772-333846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327273-327380:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:302973-305208:-1:exon

INPP5K
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: INPP5K
product: inositol polyphosphate-5-phosphatase K, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_034752937.1
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(302973..305208,307792..307896,309904..309987,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,333772..333846,335080..335272))
location: region:302973-335272:-1
so has part: feature:335080-335272:-1:exon
so has part: feature:333772-333846:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:302973-305208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335080-335272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333772-333846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327273-327380:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315947-315973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:302973-305208:-1:exon

INPP5K
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: INPP5K
product: inositol polyphosphate-5-phosphatase K, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_034752928.1
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(302973..305208,307792..307896,309904..309987,310609..310746,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,333772..333846,335080..335272))
location: region:302973-335272:-1
so has part: feature:335080-335272:-1:exon
so has part: feature:333772-333846:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:302973-305208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335080-335272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333772-333846:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315947-315973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:302973-305208:-1:exon

INPP5K
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: INPP5K
product: inositol polyphosphate-5-phosphatase K, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_034752935.1
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(302973..305208,307792..307896,309904..309987,310609..310746,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327269..327380,333772..333846,335080..335272))
location: region:302973-335272:-1
so has part: feature:335080-335272:-1:exon
so has part: feature:333772-333846:-1:exon
so has part: feature:327269-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:302973-305208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335080-335272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333772-333846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327269-327380:-1:exon

position:327269:-1
position: 327269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315947-315973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:302973-305208:-1:exon

INPP5K
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: INPP5K
product: inositol polyphosphate-5-phosphatase K, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_034752929.1
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(302973..305208,307792..307896,309904..309987,310609..310746,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,333772..333849,335080..335272))
location: region:302973-335272:-1
so has part: feature:335080-335272:-1:exon
so has part: feature:333772-333849:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:302973-305208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335080-335272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333772-333849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327273-327380:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315947-315973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:302973-305208:-1:exon

INPP5K
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: INPP5K
product: inositol polyphosphate-5-phosphatase K, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_034752936.1
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(302973..305208,307792..307896,309904..309987,310609..310746,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327269..327380,333772..333849,335080..335272))
location: region:302973-335272:-1
so has part: feature:335080-335272:-1:exon
so has part: feature:333772-333849:-1:exon
so has part: feature:327269-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:335080-335272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333772-333849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327269-327380:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315947-315973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:302973-305208:-1:exon

INPP5K
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: INPP5K
product: inositol polyphosphate-5-phosphatase K, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034752938.1
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(302973..305208,307792..307896,309904..309987,310609..310746,313809..314001,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,327560..327834))
location: region:302973-327834:-1
so has part: feature:327560-327834:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:302973-305208:-1:exon

position:327834:-1
position: 327834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327560-327834:-1:exon

position:327560:-1
position: 327560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:327273-327380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:302973-305208:-1:exon

INPP5K
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: INPP5K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X2
translation: MEPRGLAQPIDLEIMKNLRLHLVTWNVGTASPPPDVTSLLQLSSQGPSMDMYVIGLQEVNSKIINFLSDLAFDDPWSIFFMTVFSPLGYIKLSSVRMQGLLLLVFVKHAHIPFIRDIHTHYTRTGLYGYWGNKGGVTIRMSLYGHMICFMNCHLPAHIENAEQRLDDFEKILEMQQFEDENVPNILDHDILFWFGDLNFRIADYGIHFVRESISNSRYNLLWEKDQLNMAKKKEAFLQEFIEGPLQFKPTYKFDLHSDVYDTSGKKRKPAWTDRILWRVKNLSQHPSEDGDLSEGEQTISVTLNNYISHMSYGISDHKPVTGTFGLQIKPLFSTPLVTLNPEGEWNAAQDVLISYSTVSEFPSSTWDWIGLYQVAFRHVNDYVTYAWVKDDEISSSEDVTQVYISADEIPHAGGEFLLCYYSHNMQSIAGMSQPFQIQPSRRSEEKELAQENINGIEKLHSPEPYNEF
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(305110..305208,307792..307896,309904..309987,310609..310746,313809..314001,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,333772..333827))
location: region:305110-333827:-1
so has part: feature:333772-333827:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:305110-305208:-1:exon

XP_034608825.1
type: Protein
SIO_000068: ncbiprotein

position:305110:-1
position: 305110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333827:-1
position: 333827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333772-333827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327273-327380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305110-305208:-1:exon

INPP5K
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: INPP5K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X4
translation: MEPRGLAQPIDLEIMKNLRLHLVTWNVGTASPPPDVTSLLQLSSQGPSMDMYVIGLQEVNSKIINFLSDLAFDDPWSIFFMTVFSPLGYIKLSSVRMQGLLLLVFVKHAHIPFIRDIHTHYTRTGLYGYWGNKGGVTIRMSLYGHMICFMNCHLPAHIENAEQRLDDFEKILEMQQFEDENVPNILDHDILFWFGDLNFRIADYGIHFVRESISNSRYNLLWEKDQLNMAKKKEAFLQEFIEGPLQFKPTYKFDLHSDVYDTRGQKTLFWFNGKKRKPAWTDRILWRVKNLSQHPSEDGDLSEGEQTISVTLNNYISHMSYGISDHKPVTGTFGLQVAFRHVNDYVTYAWVKDDEISSSEDVTQVYISADEIPHAGGEFLLCYYSHNMQSIAGMSQPFQIQPSRRSEEKELAQENINGIEKLHSPEPYNEF
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(305110..305208,307792..307896,309904..309987,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,333772..333827))
location: region:305110-333827:-1
so has part: feature:333772-333827:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:305110-305208:-1:exon

XP_034608828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333772-333827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327273-327380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:315947-315973:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305110-305208:-1:exon

INPP5K
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: INPP5K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X1
translation: MEPRGLAQPIDLEIMKNLRLHLVTWNVGTASPPPDVTSLLQLSSQGPSMDMYVIGLQEVNSKIINFLSDLAFDDPWSIFFMTVFSPLGYIKLSSVRMQGLLLLVFVKHAHIPFIRDIHTHYTRTGLYGYWGNKGGVTIRMSLYGHMICFMNCHLPAHIENAEQRLDDFEKILEMQQFEDENVPNILDHDILFWFGDLNFRIADYGIHFVRESISNSRYNLLWEKDQLNMAKKKEAFLQEFIEGPLQFKPTYKFDLHSDVYDTRGQKTLFWFNGKKRKPAWTDRILWRVKNLSQHPSEDGDLSEGEQTISVTLNNYISHMSYGISDHKPVTGTFGLQIKPLFSTPLVTLNPEGEWNAAQDVLISYSTVSEFPSSTWDWIGLYQVAFRHVNDYVTYAWVKDDEISSSEDVTQVYISADEIPHAGGEFLLCYYSHNMQSIAGMSQPFQIQPSRRSEEKELAQENINGIEKLHSPEPYNEF
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(305110..305208,307792..307896,309904..309987,310609..310746,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,333772..333827))
location: region:305110-333827:-1
so has part: feature:333772-333827:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:305110-305208:-1:exon

XP_034608819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333772-333827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327273-327380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:315947-315973:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305110-305208:-1:exon

INPP5K
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: INPP5K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X1
translation: MEPRGLAQPIDLEIMKNLRLHLVTWNVGTASPPPDVTSLLQLSSQGPSMDMYVIGLQEVNSKIINFLSDLAFDDPWSIFFMTVFSPLGYIKLSSVRMQGLLLLVFVKHAHIPFIRDIHTHYTRTGLYGYWGNKGGVTIRMSLYGHMICFMNCHLPAHIENAEQRLDDFEKILEMQQFEDENVPNILDHDILFWFGDLNFRIADYGIHFVRESISNSRYNLLWEKDQLNMAKKKEAFLQEFIEGPLQFKPTYKFDLHSDVYDTRGQKTLFWFNGKKRKPAWTDRILWRVKNLSQHPSEDGDLSEGEQTISVTLNNYISHMSYGISDHKPVTGTFGLQIKPLFSTPLVTLNPEGEWNAAQDVLISYSTVSEFPSSTWDWIGLYQVAFRHVNDYVTYAWVKDDEISSSEDVTQVYISADEIPHAGGEFLLCYYSHNMQSIAGMSQPFQIQPSRRSEEKELAQENINGIEKLHSPEPYNEF
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(305110..305208,307792..307896,309904..309987,310609..310746,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,333772..333827))
location: region:305110-333827:-1
so has part: feature:333772-333827:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:305110-305208:-1:exon

XP_034608820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333772-333827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327273-327380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:315947-315973:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305110-305208:-1:exon

INPP5K
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: INPP5K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X1
translation: MEPRGLAQPIDLEIMKNLRLHLVTWNVGTASPPPDVTSLLQLSSQGPSMDMYVIGLQEVNSKIINFLSDLAFDDPWSIFFMTVFSPLGYIKLSSVRMQGLLLLVFVKHAHIPFIRDIHTHYTRTGLYGYWGNKGGVTIRMSLYGHMICFMNCHLPAHIENAEQRLDDFEKILEMQQFEDENVPNILDHDILFWFGDLNFRIADYGIHFVRESISNSRYNLLWEKDQLNMAKKKEAFLQEFIEGPLQFKPTYKFDLHSDVYDTRGQKTLFWFNGKKRKPAWTDRILWRVKNLSQHPSEDGDLSEGEQTISVTLNNYISHMSYGISDHKPVTGTFGLQIKPLFSTPLVTLNPEGEWNAAQDVLISYSTVSEFPSSTWDWIGLYQVAFRHVNDYVTYAWVKDDEISSSEDVTQVYISADEIPHAGGEFLLCYYSHNMQSIAGMSQPFQIQPSRRSEEKELAQENINGIEKLHSPEPYNEF
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(305110..305208,307792..307896,309904..309987,310609..310746,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,333772..333827))
location: region:305110-333827:-1
so has part: feature:333772-333827:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:305110-305208:-1:exon

XP_034608821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333772-333827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327273-327380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:315947-315973:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305110-305208:-1:exon

INPP5K
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: INPP5K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X1
translation: MEPRGLAQPIDLEIMKNLRLHLVTWNVGTASPPPDVTSLLQLSSQGPSMDMYVIGLQEVNSKIINFLSDLAFDDPWSIFFMTVFSPLGYIKLSSVRMQGLLLLVFVKHAHIPFIRDIHTHYTRTGLYGYWGNKGGVTIRMSLYGHMICFMNCHLPAHIENAEQRLDDFEKILEMQQFEDENVPNILDHDILFWFGDLNFRIADYGIHFVRESISNSRYNLLWEKDQLNMAKKKEAFLQEFIEGPLQFKPTYKFDLHSDVYDTRGQKTLFWFNGKKRKPAWTDRILWRVKNLSQHPSEDGDLSEGEQTISVTLNNYISHMSYGISDHKPVTGTFGLQIKPLFSTPLVTLNPEGEWNAAQDVLISYSTVSEFPSSTWDWIGLYQVAFRHVNDYVTYAWVKDDEISSSEDVTQVYISADEIPHAGGEFLLCYYSHNMQSIAGMSQPFQIQPSRRSEEKELAQENINGIEKLHSPEPYNEF
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(305110..305208,307792..307896,309904..309987,310609..310746,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,333772..333827))
location: region:305110-333827:-1
so has part: feature:333772-333827:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:305110-305208:-1:exon

XP_034608822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333772-333827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327273-327380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:315947-315973:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305110-305208:-1:exon

INPP5K
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: INPP5K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X1
translation: MEPRGLAQPIDLEIMKNLRLHLVTWNVGTASPPPDVTSLLQLSSQGPSMDMYVIGLQEVNSKIINFLSDLAFDDPWSIFFMTVFSPLGYIKLSSVRMQGLLLLVFVKHAHIPFIRDIHTHYTRTGLYGYWGNKGGVTIRMSLYGHMICFMNCHLPAHIENAEQRLDDFEKILEMQQFEDENVPNILDHDILFWFGDLNFRIADYGIHFVRESISNSRYNLLWEKDQLNMAKKKEAFLQEFIEGPLQFKPTYKFDLHSDVYDTRGQKTLFWFNGKKRKPAWTDRILWRVKNLSQHPSEDGDLSEGEQTISVTLNNYISHMSYGISDHKPVTGTFGLQIKPLFSTPLVTLNPEGEWNAAQDVLISYSTVSEFPSSTWDWIGLYQVAFRHVNDYVTYAWVKDDEISSSEDVTQVYISADEIPHAGGEFLLCYYSHNMQSIAGMSQPFQIQPSRRSEEKELAQENINGIEKLHSPEPYNEF
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(305110..305208,307792..307896,309904..309987,310609..310746,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,333772..333827))
location: region:305110-333827:-1
so has part: feature:333772-333827:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:305110-305208:-1:exon

XP_034608824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333772-333827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327273-327380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:315947-315973:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305110-305208:-1:exon

INPP5K
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: INPP5K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X5
translation: MASLNSEDALQDSSSLSLFDLESLHPFRSRSASFSSTGSSGRLQLRQRVAQLMACVEDISSDDEIHEEVSRTLDEAFLIWGKKLKDKCQEFRLHLVTWNVGTASPPPDVTSLLQLSSQGPSMDMYVIGLQEVNSKIINFLSDLAFDDPWSIFFMTVFSPLGYIKLSSVRMQGLLLLVFVKHAHIPFIRDIHTHYTRTGLYGYWGNKGGVTIRMSLYGHMICFMNCHLPAHIENAEQRLDDFEKILEMQQFEDENVPNILDHDILFWFGDLNFRIADYGIHFVRESISNSRYNLLWEKDQLNMAKKKEAFLQEFIEGPLQFKPTYKFDLHSDVYDTSGKKRKPAWTDRILWRVKNLSQHPSEDGDLSEGEQTISVTLNNYISHMSYGISDHKPVTGTFGLQIKPLFSTPLVTLNPEGEWNAAQDVLISYSTVSEFPSSTWDWIGLYQVAFRHVNDYVTYAWVKDDEISSSEDVTQVYISADEIPHAGGEFLLCYYSHNMQSIAGMSQPFQIQPSRRSEEKELAQENINGIEKLHSPEPYNEF
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(305110..305208,307792..307896,309904..309987,310609..310746,313809..314001,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327273..327380,327560..327834))
location: region:305110-327834:-1
so has part: feature:327560-327834:-1:exon
so has part: feature:327273-327380:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:305110-305208:-1:exon

XP_034608829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327560-327834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327273-327380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305110-305208:-1:exon

INPP5K
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: INPP5K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X3
translation: MWAQLLLLLMSLAYFSSVHRDRVWICMLSGSLQEVNSKIINFLSDLAFDDPWSIFFMTVFSPLGYIKLSSVRMQGLLLLVFVKHAHIPFIRDIHTHYTRTGLYGYWGNKGGVTIRMSLYGHMICFMNCHLPAHIENAEQRLDDFEKILEMQQFEDENVPNILDHDILFWFGDLNFRIADYGIHFVRESISNSRYNLLWEKDQLNMAKKKEAFLQEFIEGPLQFKPTYKFDLHSDVYDTRGQKTLFWFNGKKRKPAWTDRILWRVKNLSQHPSEDGDLSEGEQTISVTLNNYISHMSYGISDHKPVTGTFGLQIKPLFSTPLVTLNPEGEWNAAQDVLISYSTVSEFPSSTWDWIGLYQVAFRHVNDYVTYAWVKDDEISSSEDVTQVYISADEIPHAGGEFLLCYYSHNMQSIAGMSQPFQIQPSRRSEEKELAQENINGIEKLHSPEPYNEF
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(305110..305208,307792..307896,309904..309987,310609..310746,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327269..327360))
location: region:305110-327360:-1
so has part: feature:327269-327360:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:305110-305208:-1:exon

XP_034608826.1
type: Protein
SIO_000068: ncbiprotein

position:327360:-1
position: 327360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327269-327360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:315947-315973:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305110-305208:-1:exon

INPP5K
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: INPP5K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X3
translation: MWAQLLLLLMSLAYFSSVHRDRVWICMLSGSLQEVNSKIINFLSDLAFDDPWSIFFMTVFSPLGYIKLSSVRMQGLLLLVFVKHAHIPFIRDIHTHYTRTGLYGYWGNKGGVTIRMSLYGHMICFMNCHLPAHIENAEQRLDDFEKILEMQQFEDENVPNILDHDILFWFGDLNFRIADYGIHFVRESISNSRYNLLWEKDQLNMAKKKEAFLQEFIEGPLQFKPTYKFDLHSDVYDTRGQKTLFWFNGKKRKPAWTDRILWRVKNLSQHPSEDGDLSEGEQTISVTLNNYISHMSYGISDHKPVTGTFGLQIKPLFSTPLVTLNPEGEWNAAQDVLISYSTVSEFPSSTWDWIGLYQVAFRHVNDYVTYAWVKDDEISSSEDVTQVYISADEIPHAGGEFLLCYYSHNMQSIAGMSQPFQIQPSRRSEEKELAQENINGIEKLHSPEPYNEF
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(305110..305208,307792..307896,309904..309987,310609..310746,313809..314001,315947..315973,319745..319854,320510..320621,323654..323829,324222..324338,326298..326406,327269..327360))
location: region:305110-327360:-1
so has part: feature:327269-327360:-1:exon
so has part: feature:326298-326406:-1:exon
so has part: feature:324222-324338:-1:exon
so has part: feature:323654-323829:-1:exon
so has part: feature:320510-320621:-1:exon
so has part: feature:319745-319854:-1:exon
so has part: feature:315947-315973:-1:exon
so has part: feature:313809-314001:-1:exon
so has part: feature:310609-310746:-1:exon
so has part: feature:309904-309987:-1:exon
so has part: feature:307792-307896:-1:exon
so has part: feature:305110-305208:-1:exon

XP_034608827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327269-327360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326298-326406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324222-324338:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323654-323829:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320510-320621:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319745-319854:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:315947-315973:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:313809-314001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310609-310746:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309904-309987:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:307792-307896:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305110-305208:-1:exon

PITPNA
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: PITPNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(336963..382141)
location: region:336963-382141:-1
so has part: feature:336963-382141:-1:exon
subclass of: SO_0000010

117867320
type: Gene
SIO_000068: ncbigene

position:336963:-1
position: 336963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382141:-1
position: 382141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336963-382141:-1:exon

PITPNA
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 31138
gene: PITPNA
product: phosphatidylinositol transfer protein alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004643363.1
SIO_010081: PITPNA
so part of: PITPNA
location: complement(join(336963..337350,339736..339873,342050..342119,342896..343018,349436..349546,349797..349874,354036..354119,354539..354613,355939..355946,360904..360995,364666..364811,381961..382141))
location: region:336963-382141:-1
so has part: feature:381961-382141:-1:exon
so has part: feature:364666-364811:-1:exon
so has part: feature:360904-360995:-1:exon
so has part: feature:355939-355946:-1:exon
so has part: feature:354539-354613:-1:exon
so has part: feature:354036-354119:-1:exon
so has part: feature:349797-349874:-1:exon
so has part: feature:349436-349546:-1:exon
so has part: feature:342896-343018:-1:exon
so has part: feature:342050-342119:-1:exon
so has part: feature:339736-339873:-1:exon
so has part: feature:336963-337350:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381961-382141:-1:exon

position:381961:-1
position: 381961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:364666-364811:-1:exon

position:364666:-1
position: 364666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364811:-1
position: 364811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:360904-360995:-1:exon

position:360904:-1
position: 360904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360995:-1
position: 360995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:355939-355946:-1:exon

position:355939:-1
position: 355939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355946:-1
position: 355946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:354539-354613:-1:exon

position:354539:-1
position: 354539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354613:-1
position: 354613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:354036-354119:-1:exon

position:354036:-1
position: 354036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354119:-1
position: 354119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:349797-349874:-1:exon

position:349797:-1
position: 349797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349874:-1
position: 349874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:349436-349546:-1:exon

position:349436:-1
position: 349436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349546:-1
position: 349546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:342896-343018:-1:exon

position:342896:-1
position: 342896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343018:-1
position: 343018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:342050-342119:-1:exon

position:342050:-1
position: 342050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342119:-1
position: 342119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:339736-339873:-1:exon

position:339736:-1
position: 339736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339873:-1
position: 339873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:336963-337350:-1:exon

position:337350:-1
position: 337350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PITPNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PITPNA
product: phosphatidylinositol transfer protein alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_034752205.1
SIO_010081: PITPNA
subclass of: SO_0000673
so part of: PITPNA
location: complement(join(336963..339873,342050..342119,342896..343018,349436..349546,349797..349874,354036..354119,354539..354613,355939..355946,360904..360995,364666..364811,381961..382141))
location: region:336963-382141:-1
so has part: feature:381961-382141:-1:exon
so has part: feature:364666-364811:-1:exon
so has part: feature:360904-360995:-1:exon
so has part: feature:355939-355946:-1:exon
so has part: feature:354539-354613:-1:exon
so has part: feature:354036-354119:-1:exon
so has part: feature:349797-349874:-1:exon
so has part: feature:349436-349546:-1:exon
so has part: feature:342896-343018:-1:exon
so has part: feature:342050-342119:-1:exon
so has part: feature:336963-339873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381961-382141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364666-364811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360904-360995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:355939-355946:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:354539-354613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:354036-354119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349797-349874:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349436-349546:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342896-343018:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342050-342119:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336963-339873:-1:exon

PITPNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PITPNA
product: phosphatidylinositol transfer protein alpha, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_034752207.1
SIO_010081: PITPNA
subclass of: SO_0000673
so part of: PITPNA
location: complement(join(336963..339873,342050..342119,342896..343018,349436..349546,349797..349874,354036..354119,354539..354613,355939..355946,360904..360995,364666..364811,376093..376123,381961..382107))
location: region:336963-382107:-1
so has part: feature:381961-382107:-1:exon
so has part: feature:376093-376123:-1:exon
so has part: feature:364666-364811:-1:exon
so has part: feature:360904-360995:-1:exon
so has part: feature:355939-355946:-1:exon
so has part: feature:354539-354613:-1:exon
so has part: feature:354036-354119:-1:exon
so has part: feature:349797-349874:-1:exon
so has part: feature:349436-349546:-1:exon
so has part: feature:342896-343018:-1:exon
so has part: feature:342050-342119:-1:exon
so has part: feature:336963-339873:-1:exon

position:382107:-1
position: 382107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381961-382107:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376093-376123:-1:exon

position:376093:-1
position: 376093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376123:-1
position: 376123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:364666-364811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360904-360995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:355939-355946:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:354539-354613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:354036-354119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349797-349874:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:349436-349546:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342896-343018:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342050-342119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:336963-339873:-1:exon

PITPNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PITPNA
product: phosphatidylinositol transfer protein alpha, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_034752208.1
SIO_010081: PITPNA
subclass of: SO_0000673
so part of: PITPNA
location: complement(join(336963..339873,342050..342119,342896..343018,349436..349546,349797..349874,354036..354119,354539..354613,355939..355946,360904..360995,364666..364811,376093..376123,378045..378086,381961..382044))
location: region:336963-382044:-1
so has part: feature:381961-382044:-1:exon
so has part: feature:378045-378086:-1:exon
so has part: feature:376093-376123:-1:exon
so has part: feature:364666-364811:-1:exon
so has part: feature:360904-360995:-1:exon
so has part: feature:355939-355946:-1:exon
so has part: feature:354539-354613:-1:exon
so has part: feature:354036-354119:-1:exon
so has part: feature:349797-349874:-1:exon
so has part: feature:349436-349546:-1:exon
so has part: feature:342896-343018:-1:exon
so has part: feature:342050-342119:-1:exon
so has part: feature:336963-339873:-1:exon

position:382044:-1
position: 382044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381961-382044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378045-378086:-1:exon

position:378045:-1
position: 378045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378086:-1
position: 378086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:376093-376123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:364666-364811:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:360904-360995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:355939-355946:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:354539-354613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:354036-354119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:349797-349874:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:349436-349546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342896-343018:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:342050-342119:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:336963-339873:-1:exon

PITPNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PITPNA
product: phosphatidylinositol transfer protein alpha, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_034752209.1
SIO_010081: PITPNA
subclass of: SO_0000673
so part of: PITPNA
location: complement(join(336963..339873,342050..342119,342896..343018,349436..349546,349797..349874,354036..354119,354539..354613,355939..355946,360904..360995,364666..364811,376093..376123,381807..381824))
location: region:336963-381824:-1
so has part: feature:381807-381824:-1:exon
so has part: feature:376093-376123:-1:exon
so has part: feature:364666-364811:-1:exon
so has part: feature:360904-360995:-1:exon
so has part: feature:355939-355946:-1:exon
so has part: feature:354539-354613:-1:exon
so has part: feature:354036-354119:-1:exon
so has part: feature:349797-349874:-1:exon
so has part: feature:349436-349546:-1:exon
so has part: feature:342896-343018:-1:exon
so has part: feature:342050-342119:-1:exon
so has part: feature:336963-339873:-1:exon

position:381824:-1
position: 381824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381807-381824:-1:exon

position:381807:-1
position: 381807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376093-376123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364666-364811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360904-360995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:355939-355946:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:354539-354613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:354036-354119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349797-349874:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:349436-349546:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342896-343018:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342050-342119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:336963-339873:-1:exon

PITPNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PITPNA
product: phosphatidylinositol transfer protein alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_034752206.1
SIO_010081: PITPNA
subclass of: SO_0000673
so part of: PITPNA
location: complement(join(336963..339873,342050..342119,342896..343018,349436..349546,349797..349874,354036..354119,354539..354613,355939..355946,360904..360995,364666..364811,376093..376123,376637..376723))
location: region:336963-376723:-1
so has part: feature:376637-376723:-1:exon
so has part: feature:376093-376123:-1:exon
so has part: feature:364666-364811:-1:exon
so has part: feature:360904-360995:-1:exon
so has part: feature:355939-355946:-1:exon
so has part: feature:354539-354613:-1:exon
so has part: feature:354036-354119:-1:exon
so has part: feature:349797-349874:-1:exon
so has part: feature:349436-349546:-1:exon
so has part: feature:342896-343018:-1:exon
so has part: feature:342050-342119:-1:exon
so has part: feature:336963-339873:-1:exon

position:376723:-1
position: 376723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376637-376723:-1:exon

position:376637:-1
position: 376637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376093-376123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364666-364811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360904-360995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:355939-355946:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:354539-354613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:354036-354119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349797-349874:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:349436-349546:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342896-343018:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342050-342119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:336963-339873:-1:exon

PITPNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PITPNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol transfer protein alpha isoform isoform X1
translation: MRAARLRAAVTQWLPQKRSAPPARCGSQWSCREAPVTFSAGRSGRETLRRRGRHGANQGVYQVGQLYSVAEASKNETGGGEGVEVLMNEPYERDGERGQYTHKIYHLQSKVPSFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKDDFLIKIETWHKPDLGMQENVHKLEPDVWKNVEAVYIDIADRNQVLSKDYKQEEDPAKFKSVKTGRGPLGPNWKKELGKQTDCPYMCAYKLVTVKFKWWGLQNKVENFIQKQEKRLFTNFHRQLFCWLDKWVDLTMEDIRRMEEETKKQLDEMREKDPVKGMTAADD
SIO_010081: PITPNA
subclass of: SO_0000673
so part of: PITPNA
location: complement(join(342072..342119,342896..343018,349436..349546,349797..349874,354036..354119,354539..354613,355939..355946,360904..360995,364666..364811,381961..382140))
location: region:342072-382140:-1
so has part: feature:381961-382140:-1:exon
so has part: feature:364666-364811:-1:exon
so has part: feature:360904-360995:-1:exon
so has part: feature:355939-355946:-1:exon
so has part: feature:354539-354613:-1:exon
so has part: feature:354036-354119:-1:exon
so has part: feature:349797-349874:-1:exon
so has part: feature:349436-349546:-1:exon
so has part: feature:342896-343018:-1:exon
so has part: feature:342072-342119:-1:exon

XP_034608096.1
type: Protein
SIO_000068: ncbiprotein

position:342072:-1
position: 342072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382140:-1
position: 382140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381961-382140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364666-364811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360904-360995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:355939-355946:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:354539-354613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:354036-354119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349797-349874:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349436-349546:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342896-343018:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342072-342119:-1:exon

PITPNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PITPNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol transfer protein alpha isoform isoform X3
translation: MVLIKEYRVILPVSVEEYQVGQLYSVAEASKNETGGGEGVEVLMNEPYERDGERGQYTHKIYHLQSKVPSFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKDDFLIKIETWHKPDLGMQENVHKLEPDVWKNVEAVYIDIADRNQVLSKDYKQEEDPAKFKSVKTGRGPLGPNWKKELGKQTDCPYMCAYKLVTVKFKWWGLQNKVENFIQKQEKRLFTNFHRQLFCWLDKWVDLTMEDIRRMEEETKKQLDEMREKDPVKGMTAADD
SIO_010081: PITPNA
subclass of: SO_0000673
so part of: PITPNA
location: complement(join(342072..342119,342896..343018,349436..349546,349797..349874,354036..354119,354539..354613,355939..355946,360904..360995,364666..364811,376093..376123,381961..381980))
location: region:342072-381980:-1
so has part: feature:381961-381980:-1:exon
so has part: feature:376093-376123:-1:exon
so has part: feature:364666-364811:-1:exon
so has part: feature:360904-360995:-1:exon
so has part: feature:355939-355946:-1:exon
so has part: feature:354539-354613:-1:exon
so has part: feature:354036-354119:-1:exon
so has part: feature:349797-349874:-1:exon
so has part: feature:349436-349546:-1:exon
so has part: feature:342896-343018:-1:exon
so has part: feature:342072-342119:-1:exon

XP_034608098.1
type: Protein
SIO_000068: ncbiprotein

position:381980:-1
position: 381980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381961-381980:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376093-376123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364666-364811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360904-360995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:355939-355946:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:354539-354613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:354036-354119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349797-349874:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:349436-349546:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342896-343018:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342072-342119:-1:exon

PITPNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PITPNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol transfer protein alpha isoform isoform X2
translation: MVCCTGVAVYWMRRNQDPCCFIRNRVILPVSVEEYQVGQLYSVAEASKNETGGGEGVEVLMNEPYERDGERGQYTHKIYHLQSKVPSFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKDDFLIKIETWHKPDLGMQENVHKLEPDVWKNVEAVYIDIADRNQVLSKDYKQEEDPAKFKSVKTGRGPLGPNWKKELGKQTDCPYMCAYKLVTVKFKWWGLQNKVENFIQKQEKRLFTNFHRQLFCWLDKWVDLTMEDIRRMEEETKKQLDEMREKDPVKGMTAADD
SIO_010081: PITPNA
subclass of: SO_0000673
so part of: PITPNA
location: complement(join(342072..342119,342896..343018,349436..349546,349797..349874,354036..354119,354539..354613,355939..355946,360904..360995,364666..364811,376093..376123,376637..376707))
location: region:342072-376707:-1
so has part: feature:376637-376707:-1:exon
so has part: feature:376093-376123:-1:exon
so has part: feature:364666-364811:-1:exon
so has part: feature:360904-360995:-1:exon
so has part: feature:355939-355946:-1:exon
so has part: feature:354539-354613:-1:exon
so has part: feature:354036-354119:-1:exon
so has part: feature:349797-349874:-1:exon
so has part: feature:349436-349546:-1:exon
so has part: feature:342896-343018:-1:exon
so has part: feature:342072-342119:-1:exon

XP_034608097.1
type: Protein
SIO_000068: ncbiprotein

position:376707:-1
position: 376707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376637-376707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376093-376123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364666-364811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360904-360995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:355939-355946:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:354539-354613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:354036-354119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349797-349874:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:349436-349546:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342896-343018:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342072-342119:-1:exon

PITPNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PITPNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol transfer protein alpha isoform isoform X4
translation: MNEPYERDGERGQYTHKIYHLQSKVPSFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKDDFLIKIETWHKPDLGMQENVHKLEPDVWKNVEAVYIDIADRNQVLSKDYKQEEDPAKFKSVKTGRGPLGPNWKKELGKQTDCPYMCAYKLVTVKFKWWGLQNKVENFIQKQEKRLFTNFHRQLFCWLDKWVDLTMEDIRRMEEETKKQLDEMREKDPVKGMTAADD
SIO_010081: PITPNA
subclass of: SO_0000673
so part of: PITPNA
location: complement(join(342072..342119,342896..343018,349436..349546,349797..349874,354036..354119,354539..354613,355939..355946,360904..360995,364666..364733))
location: region:342072-364733:-1
so has part: feature:364666-364733:-1:exon
so has part: feature:360904-360995:-1:exon
so has part: feature:355939-355946:-1:exon
so has part: feature:354539-354613:-1:exon
so has part: feature:354036-354119:-1:exon
so has part: feature:349797-349874:-1:exon
so has part: feature:349436-349546:-1:exon
so has part: feature:342896-343018:-1:exon
so has part: feature:342072-342119:-1:exon

XP_034608099.1
type: Protein
SIO_000068: ncbiprotein

position:364733:-1
position: 364733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364666-364733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360904-360995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355939-355946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354539-354613:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:354036-354119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:349797-349874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349436-349546:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342896-343018:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342072-342119:-1:exon

PITPNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PITPNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol transfer protein alpha isoform isoform X4
translation: MNEPYERDGERGQYTHKIYHLQSKVPSFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKDDFLIKIETWHKPDLGMQENVHKLEPDVWKNVEAVYIDIADRNQVLSKDYKQEEDPAKFKSVKTGRGPLGPNWKKELGKQTDCPYMCAYKLVTVKFKWWGLQNKVENFIQKQEKRLFTNFHRQLFCWLDKWVDLTMEDIRRMEEETKKQLDEMREKDPVKGMTAADD
SIO_010081: PITPNA
subclass of: SO_0000673
so part of: PITPNA
location: complement(join(342072..342119,342896..343018,349436..349546,349797..349874,354036..354119,354539..354613,355939..355946,360904..360995,364666..364733))
location: region:342072-364733:-1
so has part: feature:364666-364733:-1:exon
so has part: feature:360904-360995:-1:exon
so has part: feature:355939-355946:-1:exon
so has part: feature:354539-354613:-1:exon
so has part: feature:354036-354119:-1:exon
so has part: feature:349797-349874:-1:exon
so has part: feature:349436-349546:-1:exon
so has part: feature:342896-343018:-1:exon
so has part: feature:342072-342119:-1:exon

XP_034608100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364666-364733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360904-360995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355939-355946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354539-354613:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:354036-354119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:349797-349874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349436-349546:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342896-343018:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342072-342119:-1:exon

SLC43A2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SLC43A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(396351..442860)
location: region:396351-442860:-1
so has part: feature:396351-442860:-1:exon
subclass of: SO_0000010

117867394
type: Gene
SIO_000068: ncbigene

position:396351:-1
position: 396351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442860:-1
position: 442860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396351-442860:-1:exon

SLC43A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SLC43A2
product: solute carrier family 43 member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034752375.1
SIO_010081: SLC43A2
subclass of: SO_0000673
so part of: SLC43A2
location: complement(join(396351..402081,403975..404098,405521..405594,407378..407510,407838..407976,409017..409028,413556..413702,414293..414492,415021..415154,417196..417288,426828..426904,427970..428025,429308..429512,440678..440874,441703..442859))
location: region:396351-442859:-1
so has part: feature:441703-442859:-1:exon
so has part: feature:440678-440874:-1:exon
so has part: feature:429308-429512:-1:exon
so has part: feature:427970-428025:-1:exon
so has part: feature:426828-426904:-1:exon
so has part: feature:417196-417288:-1:exon
so has part: feature:415021-415154:-1:exon
so has part: feature:414293-414492:-1:exon
so has part: feature:413556-413702:-1:exon
so has part: feature:409017-409028:-1:exon
so has part: feature:407838-407976:-1:exon
so has part: feature:407378-407510:-1:exon
so has part: feature:405521-405594:-1:exon
so has part: feature:403975-404098:-1:exon
so has part: feature:396351-402081:-1:exon

position:442859:-1
position: 442859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441703-442859:-1:exon

position:441703:-1
position: 441703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:440678-440874:-1:exon

position:440678:-1
position: 440678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440874:-1
position: 440874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:429308-429512:-1:exon

position:429308:-1
position: 429308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429512:-1
position: 429512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:427970-428025:-1:exon

position:427970:-1
position: 427970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428025:-1
position: 428025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:426828-426904:-1:exon

position:426828:-1
position: 426828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426904:-1
position: 426904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:417196-417288:-1:exon

position:417196:-1
position: 417196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417288:-1
position: 417288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:415021-415154:-1:exon

position:415021:-1
position: 415021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415154:-1
position: 415154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:414293-414492:-1:exon

position:414293:-1
position: 414293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414492:-1
position: 414492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:413556-413702:-1:exon

position:413556:-1
position: 413556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413702:-1
position: 413702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:409017-409028:-1:exon

position:409017:-1
position: 409017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409028:-1
position: 409028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:407838-407976:-1:exon

position:407838:-1
position: 407838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407976:-1
position: 407976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:407378-407510:-1:exon

position:407378:-1
position: 407378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407510:-1
position: 407510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:405521-405594:-1:exon

position:405521:-1
position: 405521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405594:-1
position: 405594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:403975-404098:-1:exon

position:403975:-1
position: 403975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404098:-1
position: 404098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:396351-402081:-1:exon

position:402081:-1
position: 402081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC43A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SLC43A2
product: solute carrier family 43 member 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034752380.1
SIO_010081: SLC43A2
subclass of: SO_0000673
so part of: SLC43A2
location: complement(join(396351..402081,403975..404098,405521..405594,407378..407510,407838..407976,409017..409028,413556..413702,414293..414492,415021..415154,417196..417288,426828..426904,427970..428025,429308..429512,436754..436822,440678..440765))
location: region:396351-440765:-1
so has part: feature:440678-440765:-1:exon
so has part: feature:436754-436822:-1:exon
so has part: feature:429308-429512:-1:exon
so has part: feature:427970-428025:-1:exon
so has part: feature:426828-426904:-1:exon
so has part: feature:417196-417288:-1:exon
so has part: feature:415021-415154:-1:exon
so has part: feature:414293-414492:-1:exon
so has part: feature:413556-413702:-1:exon
so has part: feature:409017-409028:-1:exon
so has part: feature:407838-407976:-1:exon
so has part: feature:407378-407510:-1:exon
so has part: feature:405521-405594:-1:exon
so has part: feature:403975-404098:-1:exon
so has part: feature:396351-402081:-1:exon

position:440765:-1
position: 440765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440678-440765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436754-436822:-1:exon

position:436754:-1
position: 436754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436822:-1
position: 436822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:429308-429512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427970-428025:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426828-426904:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:417196-417288:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415021-415154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414293-414492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413556-413702:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409017-409028:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407838-407976:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:407378-407510:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:405521-405594:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:403975-404098:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:396351-402081:-1:exon

SLC43A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SLC43A2
product: solute carrier family 43 member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034752378.1
SIO_010081: SLC43A2
subclass of: SO_0000673
so part of: SLC43A2
location: complement(join(401920..402081,403975..404098,405521..405594,407378..407510,407838..407976,409017..409028,413556..413702,414293..414492,415021..415154,417196..417288,426828..426904,427970..428025,429308..429512,440678..440874,442661..442860))
location: region:401920-442860:-1
so has part: feature:442661-442860:-1:exon
so has part: feature:440678-440874:-1:exon
so has part: feature:429308-429512:-1:exon
so has part: feature:427970-428025:-1:exon
so has part: feature:426828-426904:-1:exon
so has part: feature:417196-417288:-1:exon
so has part: feature:415021-415154:-1:exon
so has part: feature:414293-414492:-1:exon
so has part: feature:413556-413702:-1:exon
so has part: feature:409017-409028:-1:exon
so has part: feature:407838-407976:-1:exon
so has part: feature:407378-407510:-1:exon
so has part: feature:405521-405594:-1:exon
so has part: feature:403975-404098:-1:exon
so has part: feature:401920-402081:-1:exon

position:401920:-1
position: 401920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442661-442860:-1:exon

position:442661:-1
position: 442661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:440678-440874:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429308-429512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427970-428025:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426828-426904:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:417196-417288:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415021-415154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414293-414492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413556-413702:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409017-409028:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407838-407976:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:407378-407510:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:405521-405594:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:403975-404098:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:401920-402081:-1:exon

SLC43A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SLC43A2
product: solute carrier family 43 member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034752377.1
SIO_010081: SLC43A2
subclass of: SO_0000673
so part of: SLC43A2
location: complement(join(401920..402081,403975..404098,405521..405594,407378..407510,407838..407976,409017..409028,413556..413702,414293..414492,415021..415154,417196..417288,426828..426904,427970..428025,429308..429512,440678..440874,442503..442860))
location: region:401920-442860:-1
so has part: feature:442503-442860:-1:exon
so has part: feature:440678-440874:-1:exon
so has part: feature:429308-429512:-1:exon
so has part: feature:427970-428025:-1:exon
so has part: feature:426828-426904:-1:exon
so has part: feature:417196-417288:-1:exon
so has part: feature:415021-415154:-1:exon
so has part: feature:414293-414492:-1:exon
so has part: feature:413556-413702:-1:exon
so has part: feature:409017-409028:-1:exon
so has part: feature:407838-407976:-1:exon
so has part: feature:407378-407510:-1:exon
so has part: feature:405521-405594:-1:exon
so has part: feature:403975-404098:-1:exon
so has part: feature:401920-402081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442503-442860:-1:exon

position:442503:-1
position: 442503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:440678-440874:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429308-429512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427970-428025:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426828-426904:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:417196-417288:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415021-415154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414293-414492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413556-413702:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409017-409028:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407838-407976:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:407378-407510:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:405521-405594:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:403975-404098:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:401920-402081:-1:exon

SLC43A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SLC43A2
product: solute carrier family 43 member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034752374.1
SIO_010081: SLC43A2
subclass of: SO_0000673
so part of: SLC43A2
location: complement(join(401920..402081,403975..404098,405521..405594,407378..407510,407838..407976,409017..409028,413556..413702,414293..414492,415021..415154,417196..417288,426828..426904,427970..428025,429308..429512,440678..440874,442188..442860))
location: region:401920-442860:-1
so has part: feature:442188-442860:-1:exon
so has part: feature:440678-440874:-1:exon
so has part: feature:429308-429512:-1:exon
so has part: feature:427970-428025:-1:exon
so has part: feature:426828-426904:-1:exon
so has part: feature:417196-417288:-1:exon
so has part: feature:415021-415154:-1:exon
so has part: feature:414293-414492:-1:exon
so has part: feature:413556-413702:-1:exon
so has part: feature:409017-409028:-1:exon
so has part: feature:407838-407976:-1:exon
so has part: feature:407378-407510:-1:exon
so has part: feature:405521-405594:-1:exon
so has part: feature:403975-404098:-1:exon
so has part: feature:401920-402081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442188-442860:-1:exon

position:442188:-1
position: 442188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:440678-440874:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429308-429512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427970-428025:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426828-426904:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:417196-417288:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415021-415154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414293-414492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413556-413702:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409017-409028:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407838-407976:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:407378-407510:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:405521-405594:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:403975-404098:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:401920-402081:-1:exon

SLC43A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SLC43A2
product: solute carrier family 43 member 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_034752379.1
SIO_010081: SLC43A2
subclass of: SO_0000673
so part of: SLC43A2
location: complement(join(401920..402081,403975..404098,405521..405594,407378..407510,407838..407976,413556..413702,414293..414492,415021..415154,417196..417288,426828..426904,427970..428025,429308..429512,440678..440874,441703..442859))
location: region:401920-442859:-1
so has part: feature:441703-442859:-1:exon
so has part: feature:440678-440874:-1:exon
so has part: feature:429308-429512:-1:exon
so has part: feature:427970-428025:-1:exon
so has part: feature:426828-426904:-1:exon
so has part: feature:417196-417288:-1:exon
so has part: feature:415021-415154:-1:exon
so has part: feature:414293-414492:-1:exon
so has part: feature:413556-413702:-1:exon
so has part: feature:407838-407976:-1:exon
so has part: feature:407378-407510:-1:exon
so has part: feature:405521-405594:-1:exon
so has part: feature:403975-404098:-1:exon
so has part: feature:401920-402081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441703-442859:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440678-440874:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429308-429512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427970-428025:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426828-426904:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:417196-417288:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415021-415154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414293-414492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413556-413702:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407838-407976:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407378-407510:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:405521-405594:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:403975-404098:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401920-402081:-1:exon

SLC43A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SLC43A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: large neutral amino acids transporter small subunit 4 isoform X2
translation: MAPTLATAHRRRWWMACTAVVENLLFSAVLLGWASLLIMLKSEGFYSYLCHEPENFTTSFVHGNRTEQEAVIRINGWLICPEQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCVMIAYGASNPNSLSVLIFISLSLNGFGGMCMTFTSLTLPNMFGDLRSTFIALMIGSYASSAVTFPGIKVIYDFGVSFILILIVWASCAGLVFFNCFFNWPLEPFPGPEDMDYTVKIKFSWLGFDHKITGKQFYKQVTTVGRRLSVGSSMKNPKELAAQEGNKLCLSTVDLEVKCQADDAASPSFMHSVFSPILLLSLITMCVTQLRLIFYMGAMNNILGFFVEGDLETVSLYTSVFGVLQLLCLMTAPMIGYIMDWKLKECDDGSEEADESDANQDGKKKKKRDRQIQKISNATRAFVFTNILLVGFGITCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGSLTGLQSLVSALFALLQQPLFLAMMGPLKGDPLWVNVGLLGVSMLGFCLPIYLICYKHRLEREKQQRSDDAKLFLKINGTPNEEAFV
SIO_010081: SLC43A2
subclass of: SO_0000673
so part of: SLC43A2
location: complement(join(401920..402081,403975..404098,405521..405594,407378..407510,407838..407976,413556..413702,414293..414492,415021..415154,417196..417288,426828..426904,427970..428025,429308..429512,440678..440837))
location: region:401920-440837:-1
so has part: feature:440678-440837:-1:exon
so has part: feature:429308-429512:-1:exon
so has part: feature:427970-428025:-1:exon
so has part: feature:426828-426904:-1:exon
so has part: feature:417196-417288:-1:exon
so has part: feature:415021-415154:-1:exon
so has part: feature:414293-414492:-1:exon
so has part: feature:413556-413702:-1:exon
so has part: feature:407838-407976:-1:exon
so has part: feature:407378-407510:-1:exon
so has part: feature:405521-405594:-1:exon
so has part: feature:403975-404098:-1:exon
so has part: feature:401920-402081:-1:exon

XP_034608270.1
type: Protein
SIO_000068: ncbiprotein

position:440837:-1
position: 440837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440678-440837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429308-429512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:427970-428025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426828-426904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417196-417288:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415021-415154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414293-414492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413556-413702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407838-407976:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407378-407510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:405521-405594:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:403975-404098:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401920-402081:-1:exon

SLC43A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SLC43A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: large neutral amino acids transporter small subunit 4 isoform X1
translation: MAPTLATAHRRRWWMACTAVVENLLFSAVLLGWASLLIMLKSEGFYSYLCHEPENFTTSFVHGNRTEQEAVIRINGWLICPEQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCVMIAYGASNPNSLSVLIFISLSLNGFGGMCMTFTSLTLPNMFGDLRSTFIALMIGSYASSAVTFPGIKVIYDFGVSFILILIVWASCAGLVFFNCFFNWPLEPFPGPEDMDYTVKIKFSWLGFDHKITGKQFYKQVTTVGRRLSVGSSMKNPKELAAQEGNKLCLSTVDLEVKCQADDAASPSFMHSVFSPILLLSLITMCVTQLRLIFYMGAMNNILGFFVEGDLETVMDTVSLYTSVFGVLQLLCLMTAPMIGYIMDWKLKECDDGSEEADESDANQDGKKKKKRDRQIQKISNATRAFVFTNILLVGFGITCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGSLTGLQSLVSALFALLQQPLFLAMMGPLKGDPLWVNVGLLGVSMLGFCLPIYLICYKHRLEREKQQRSDDAKLFLKINGTPNEEAFV
SIO_010081: SLC43A2
subclass of: SO_0000673
so part of: SLC43A2
location: complement(join(401920..402081,403975..404098,405521..405594,407378..407510,407838..407976,409017..409028,413556..413702,414293..414492,415021..415154,417196..417288,426828..426904,427970..428025,429308..429512,440678..440837))
location: region:401920-440837:-1
so has part: feature:440678-440837:-1:exon
so has part: feature:429308-429512:-1:exon
so has part: feature:427970-428025:-1:exon
so has part: feature:426828-426904:-1:exon
so has part: feature:417196-417288:-1:exon
so has part: feature:415021-415154:-1:exon
so has part: feature:414293-414492:-1:exon
so has part: feature:413556-413702:-1:exon
so has part: feature:409017-409028:-1:exon
so has part: feature:407838-407976:-1:exon
so has part: feature:407378-407510:-1:exon
so has part: feature:405521-405594:-1:exon
so has part: feature:403975-404098:-1:exon
so has part: feature:401920-402081:-1:exon

XP_034608265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440678-440837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429308-429512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:427970-428025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426828-426904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417196-417288:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415021-415154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414293-414492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413556-413702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409017-409028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407838-407976:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407378-407510:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:405521-405594:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:403975-404098:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401920-402081:-1:exon

SLC43A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SLC43A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: large neutral amino acids transporter small subunit 4 isoform X1
translation: MAPTLATAHRRRWWMACTAVVENLLFSAVLLGWASLLIMLKSEGFYSYLCHEPENFTTSFVHGNRTEQEAVIRINGWLICPEQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCVMIAYGASNPNSLSVLIFISLSLNGFGGMCMTFTSLTLPNMFGDLRSTFIALMIGSYASSAVTFPGIKVIYDFGVSFILILIVWASCAGLVFFNCFFNWPLEPFPGPEDMDYTVKIKFSWLGFDHKITGKQFYKQVTTVGRRLSVGSSMKNPKELAAQEGNKLCLSTVDLEVKCQADDAASPSFMHSVFSPILLLSLITMCVTQLRLIFYMGAMNNILGFFVEGDLETVMDTVSLYTSVFGVLQLLCLMTAPMIGYIMDWKLKECDDGSEEADESDANQDGKKKKKRDRQIQKISNATRAFVFTNILLVGFGITCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGSLTGLQSLVSALFALLQQPLFLAMMGPLKGDPLWVNVGLLGVSMLGFCLPIYLICYKHRLEREKQQRSDDAKLFLKINGTPNEEAFV
SIO_010081: SLC43A2
subclass of: SO_0000673
so part of: SLC43A2
location: complement(join(401920..402081,403975..404098,405521..405594,407378..407510,407838..407976,409017..409028,413556..413702,414293..414492,415021..415154,417196..417288,426828..426904,427970..428025,429308..429512,440678..440837))
location: region:401920-440837:-1
so has part: feature:440678-440837:-1:exon
so has part: feature:429308-429512:-1:exon
so has part: feature:427970-428025:-1:exon
so has part: feature:426828-426904:-1:exon
so has part: feature:417196-417288:-1:exon
so has part: feature:415021-415154:-1:exon
so has part: feature:414293-414492:-1:exon
so has part: feature:413556-413702:-1:exon
so has part: feature:409017-409028:-1:exon
so has part: feature:407838-407976:-1:exon
so has part: feature:407378-407510:-1:exon
so has part: feature:405521-405594:-1:exon
so has part: feature:403975-404098:-1:exon
so has part: feature:401920-402081:-1:exon

XP_034608266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440678-440837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429308-429512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:427970-428025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426828-426904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417196-417288:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415021-415154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414293-414492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413556-413702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409017-409028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407838-407976:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407378-407510:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:405521-405594:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:403975-404098:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401920-402081:-1:exon

SLC43A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SLC43A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: large neutral amino acids transporter small subunit 4 isoform X1
translation: MAPTLATAHRRRWWMACTAVVENLLFSAVLLGWASLLIMLKSEGFYSYLCHEPENFTTSFVHGNRTEQEAVIRINGWLICPEQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCVMIAYGASNPNSLSVLIFISLSLNGFGGMCMTFTSLTLPNMFGDLRSTFIALMIGSYASSAVTFPGIKVIYDFGVSFILILIVWASCAGLVFFNCFFNWPLEPFPGPEDMDYTVKIKFSWLGFDHKITGKQFYKQVTTVGRRLSVGSSMKNPKELAAQEGNKLCLSTVDLEVKCQADDAASPSFMHSVFSPILLLSLITMCVTQLRLIFYMGAMNNILGFFVEGDLETVMDTVSLYTSVFGVLQLLCLMTAPMIGYIMDWKLKECDDGSEEADESDANQDGKKKKKRDRQIQKISNATRAFVFTNILLVGFGITCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGSLTGLQSLVSALFALLQQPLFLAMMGPLKGDPLWVNVGLLGVSMLGFCLPIYLICYKHRLEREKQQRSDDAKLFLKINGTPNEEAFV
SIO_010081: SLC43A2
subclass of: SO_0000673
so part of: SLC43A2
location: complement(join(401920..402081,403975..404098,405521..405594,407378..407510,407838..407976,409017..409028,413556..413702,414293..414492,415021..415154,417196..417288,426828..426904,427970..428025,429308..429512,440678..440837))
location: region:401920-440837:-1
so has part: feature:440678-440837:-1:exon
so has part: feature:429308-429512:-1:exon
so has part: feature:427970-428025:-1:exon
so has part: feature:426828-426904:-1:exon
so has part: feature:417196-417288:-1:exon
so has part: feature:415021-415154:-1:exon
so has part: feature:414293-414492:-1:exon
so has part: feature:413556-413702:-1:exon
so has part: feature:409017-409028:-1:exon
so has part: feature:407838-407976:-1:exon
so has part: feature:407378-407510:-1:exon
so has part: feature:405521-405594:-1:exon
so has part: feature:403975-404098:-1:exon
so has part: feature:401920-402081:-1:exon

XP_034608268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440678-440837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429308-429512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:427970-428025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426828-426904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417196-417288:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415021-415154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414293-414492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413556-413702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409017-409028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407838-407976:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407378-407510:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:405521-405594:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:403975-404098:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401920-402081:-1:exon

SLC43A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SLC43A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: large neutral amino acids transporter small subunit 4 isoform X1
translation: MAPTLATAHRRRWWMACTAVVENLLFSAVLLGWASLLIMLKSEGFYSYLCHEPENFTTSFVHGNRTEQEAVIRINGWLICPEQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCVMIAYGASNPNSLSVLIFISLSLNGFGGMCMTFTSLTLPNMFGDLRSTFIALMIGSYASSAVTFPGIKVIYDFGVSFILILIVWASCAGLVFFNCFFNWPLEPFPGPEDMDYTVKIKFSWLGFDHKITGKQFYKQVTTVGRRLSVGSSMKNPKELAAQEGNKLCLSTVDLEVKCQADDAASPSFMHSVFSPILLLSLITMCVTQLRLIFYMGAMNNILGFFVEGDLETVMDTVSLYTSVFGVLQLLCLMTAPMIGYIMDWKLKECDDGSEEADESDANQDGKKKKKRDRQIQKISNATRAFVFTNILLVGFGITCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGSLTGLQSLVSALFALLQQPLFLAMMGPLKGDPLWVNVGLLGVSMLGFCLPIYLICYKHRLEREKQQRSDDAKLFLKINGTPNEEAFV
SIO_010081: SLC43A2
subclass of: SO_0000673
so part of: SLC43A2
location: complement(join(401920..402081,403975..404098,405521..405594,407378..407510,407838..407976,409017..409028,413556..413702,414293..414492,415021..415154,417196..417288,426828..426904,427970..428025,429308..429512,440678..440837))
location: region:401920-440837:-1
so has part: feature:440678-440837:-1:exon
so has part: feature:429308-429512:-1:exon
so has part: feature:427970-428025:-1:exon
so has part: feature:426828-426904:-1:exon
so has part: feature:417196-417288:-1:exon
so has part: feature:415021-415154:-1:exon
so has part: feature:414293-414492:-1:exon
so has part: feature:413556-413702:-1:exon
so has part: feature:409017-409028:-1:exon
so has part: feature:407838-407976:-1:exon
so has part: feature:407378-407510:-1:exon
so has part: feature:405521-405594:-1:exon
so has part: feature:403975-404098:-1:exon
so has part: feature:401920-402081:-1:exon

XP_034608269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440678-440837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429308-429512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:427970-428025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426828-426904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417196-417288:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415021-415154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414293-414492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413556-413702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409017-409028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407838-407976:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407378-407510:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:405521-405594:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:403975-404098:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401920-402081:-1:exon

SLC43A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SLC43A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: large neutral amino acids transporter small subunit 4 isoform X3
translation: MGERCRNSKAKNFTTSFVHGNRTEQEAVIRINGWLICPEQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCVMIAYGASNPNSLSVLIFISLSLNGFGGMCMTFTSLTLPNMFGDLRSTFIALMIGSYASSAVTFPGIKVIYDFGVSFILILIVWASCAGLVFFNCFFNWPLEPFPGPEDMDYTVKIKFSWLGFDHKITGKQFYKQVTTVGRRLSVGSSMKNPKELAAQEGNKLCLSTVDLEVKCQADDAASPSFMHSVFSPILLLSLITMCVTQLRLIFYMGAMNNILGFFVEGDLETVMDTVSLYTSVFGVLQLLCLMTAPMIGYIMDWKLKECDDGSEEADESDANQDGKKKKKRDRQIQKISNATRAFVFTNILLVGFGITCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGSLTGLQSLVSALFALLQQPLFLAMMGPLKGDPLWVNVGLLGVSMLGFCLPIYLICYKHRLEREKQQRSDDAKLFLKINGTPNEEAFV
SIO_010081: SLC43A2
subclass of: SO_0000673
so part of: SLC43A2
location: complement(join(401920..402081,403975..404098,405521..405594,407378..407510,407838..407976,409017..409028,413556..413702,414293..414492,415021..415154,417196..417288,426828..426904,427970..428025,429308..429512,436754..436784))
location: region:401920-436784:-1
so has part: feature:436754-436784:-1:exon
so has part: feature:429308-429512:-1:exon
so has part: feature:427970-428025:-1:exon
so has part: feature:426828-426904:-1:exon
so has part: feature:417196-417288:-1:exon
so has part: feature:415021-415154:-1:exon
so has part: feature:414293-414492:-1:exon
so has part: feature:413556-413702:-1:exon
so has part: feature:409017-409028:-1:exon
so has part: feature:407838-407976:-1:exon
so has part: feature:407378-407510:-1:exon
so has part: feature:405521-405594:-1:exon
so has part: feature:403975-404098:-1:exon
so has part: feature:401920-402081:-1:exon

XP_034608271.1
type: Protein
SIO_000068: ncbiprotein

position:436784:-1
position: 436784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436754-436784:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429308-429512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:427970-428025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426828-426904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417196-417288:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415021-415154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414293-414492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413556-413702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:409017-409028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407838-407976:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407378-407510:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:405521-405594:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:403975-404098:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401920-402081:-1:exon

SCARF1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SCARF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(463934..478657)
location: region:463934-478657:-1
so has part: feature:463934-478657:-1:exon
subclass of: SO_0000010

117867369
type: Gene
SIO_000068: ncbigene

position:463934:-1
position: 463934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478657:-1
position: 478657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463934-478657:-1:exon

SCARF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SCARF1
product: scavenger receptor class F member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034752330.1
SIO_010081: SCARF1
subclass of: SO_0000673
so part of: SCARF1
location: complement(join(463934..467571,468254..468394,468668..468792,469234..469351,470890..470972,471057..471185,472055..472273,473204..473729,474243..474344,475447..475508,477408..477674,478376..478657))
location: region:463934-478657:-1
so has part: feature:478376-478657:-1:exon
so has part: feature:477408-477674:-1:exon
so has part: feature:475447-475508:-1:exon
so has part: feature:474243-474344:-1:exon
so has part: feature:473204-473729:-1:exon
so has part: feature:472055-472273:-1:exon
so has part: feature:471057-471185:-1:exon
so has part: feature:470890-470972:-1:exon
so has part: feature:469234-469351:-1:exon
so has part: feature:468668-468792:-1:exon
so has part: feature:468254-468394:-1:exon
so has part: feature:463934-467571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:478376-478657:-1:exon

position:478376:-1
position: 478376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:477408-477674:-1:exon

position:477408:-1
position: 477408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477674:-1
position: 477674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:475447-475508:-1:exon

position:475447:-1
position: 475447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475508:-1
position: 475508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:474243-474344:-1:exon

position:474243:-1
position: 474243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474344:-1
position: 474344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:473204-473729:-1:exon

position:473204:-1
position: 473204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473729:-1
position: 473729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:472055-472273:-1:exon

position:472055:-1
position: 472055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472273:-1
position: 472273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:471057-471185:-1:exon

position:471057:-1
position: 471057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471185:-1
position: 471185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:470890-470972:-1:exon

position:470890:-1
position: 470890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470972:-1
position: 470972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:469234-469351:-1:exon

position:469234:-1
position: 469234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469351:-1
position: 469351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:468668-468792:-1:exon

position:468668:-1
position: 468668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468792:-1
position: 468792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:468254-468394:-1:exon

position:468254:-1
position: 468254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468394:-1
position: 468394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:463934-467571:-1:exon

position:467571:-1
position: 467571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCARF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SCARF1
product: scavenger receptor class F member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_034752329.1
SIO_010081: SCARF1
subclass of: SO_0000673
so part of: SCARF1
location: complement(join(463934..467571,468254..468394,468668..468792,469234..469351,470890..470972,471057..471185,472055..472273,473204..473729,474243..474344,475447..475508,477408..477674,477995..478657))
location: region:463934-478657:-1
so has part: feature:477995-478657:-1:exon
so has part: feature:477408-477674:-1:exon
so has part: feature:475447-475508:-1:exon
so has part: feature:474243-474344:-1:exon
so has part: feature:473204-473729:-1:exon
so has part: feature:472055-472273:-1:exon
so has part: feature:471057-471185:-1:exon
so has part: feature:470890-470972:-1:exon
so has part: feature:469234-469351:-1:exon
so has part: feature:468668-468792:-1:exon
so has part: feature:468254-468394:-1:exon
so has part: feature:463934-467571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477995-478657:-1:exon

position:477995:-1
position: 477995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:477408-477674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475447-475508:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474243-474344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473204-473729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472055-472273:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:471057-471185:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:470890-470972:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:469234-469351:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:468668-468792:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:468254-468394:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:463934-467571:-1:exon

SCARF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SCARF1
product: scavenger receptor class F member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_034752331.1
SIO_010081: SCARF1
subclass of: SO_0000673
so part of: SCARF1
location: complement(join(463934..467571,468254..468394,468668..468792,469234..469351,470890..470972,471057..471185,472055..472273,473204..473729,475447..475508,477408..478657))
location: region:463934-478657:-1
so has part: feature:477408-478657:-1:exon
so has part: feature:475447-475508:-1:exon
so has part: feature:473204-473729:-1:exon
so has part: feature:472055-472273:-1:exon
so has part: feature:471057-471185:-1:exon
so has part: feature:470890-470972:-1:exon
so has part: feature:469234-469351:-1:exon
so has part: feature:468668-468792:-1:exon
so has part: feature:468254-468394:-1:exon
so has part: feature:463934-467571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477408-478657:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:475447-475508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473204-473729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472055-472273:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471057-471185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470890-470972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469234-469351:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:468668-468792:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:468254-468394:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:463934-467571:-1:exon

SCARF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SCARF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scavenger receptor class F member 1 isoform X2
translation: MAQLLLLLFCLHFWPWIGSSAQELDPNGKNVCKATSLSAGLVCCPGWKQEGRDCTAGCPDQYWGSDCKKSCSCHPNGKCDPVSGQCTCNANRWGVLCEFPCQCGPHGHCNTRTGACHCEPGWWGPNCKKQCLCRVAGSHCDPVSGQCVCTQGWWGRRCSLRCNCHLSPCAQDSGRCECRAGFWGPLCQHHCDCLHGNCNPLDGHCSCNPGYQGRSCGDPCLAGYYGSQCRYSCGHCKQSQPCSPVDGFCLACDSGWNGTLCKKLCTPGYHGENCAQLCPSCRKGETCHPETGACLNCDPGKTGPSCDAPCPAGTFGDGCRFTCPDCVNGSCDPVAGECICQAGYWGTSCNETCPEGFFGANCSSPCHTHSGDCVLRSKHQGALIAGILIPLLLLLLCVTCCCCCCGTSQLEARDRVAVADGDAVSRMKHHVQGVLANLSSMLPCLSLSGYKLPRVTVSHHDTEIPFNPSFIEPPSAAWASDSSFSSSFDTDDEGPAYCVPAREDVPAVAGFELQEGSSKCHEFPDASAFNSEDVSQPFTIPRTSSIARAKRPSVSFAEGTKFGPQCQRGPMETPNTTRKPKAPWGLTKLPSHQHHADPEEGPQQGGSPGDCYENPEPISEAEDSHRPSPRGTPGGHRMAASSGSHVAQRVEALEAALNPNTLDVRGKEQNVTTIYVTVGTAGKSSKPNERANGSREGTVQAVLKRLGSFQRVKRAFREEPMVRKSTESIQKPPRRALGPERDSRDLFPQPAPPHKDSSKTTGLEPCESPALLTDRHQIDVPVKREPLIPTSPIFERQVAQEGEDGVTGDPKKSESLEETRSLETNEQAVVEEEPKYENVSPNRCPSDEPPATSPDCAANT
SIO_010081: SCARF1
subclass of: SO_0000673
so part of: SCARF1
location: complement(join(466499..467571,468254..468394,468668..468792,469234..469351,470890..470972,471057..471185,472055..472273,473204..473729,475447..475508,477408..477514))
location: region:466499-477514:-1
so has part: feature:477408-477514:-1:exon
so has part: feature:475447-475508:-1:exon
so has part: feature:473204-473729:-1:exon
so has part: feature:472055-472273:-1:exon
so has part: feature:471057-471185:-1:exon
so has part: feature:470890-470972:-1:exon
so has part: feature:469234-469351:-1:exon
so has part: feature:468668-468792:-1:exon
so has part: feature:468254-468394:-1:exon
so has part: feature:466499-467571:-1:exon

XP_034608222.1
type: Protein
SIO_000068: ncbiprotein

position:466499:-1
position: 466499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477514:-1
position: 477514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477408-477514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:475447-475508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473204-473729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472055-472273:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471057-471185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470890-470972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469234-469351:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:468668-468792:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:468254-468394:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466499-467571:-1:exon

SCARF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SCARF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scavenger receptor class F member 1 isoform X1
translation: MAQLLLLLFCLHFWPWIGSSAQELDPNGKNVCKATSLSAGLVCCPGWKQEGRDCTAALCEGEDACKVDEVCVRPGICLCKPGFFGANCNSRCPDQYWGSDCKKSCSCHPNGKCDPVSGQCTCNANRWGVLCEFPCQCGPHGHCNTRTGACHCEPGWWGPNCKKQCLCRVAGSHCDPVSGQCVCTQGWWGRRCSLRCNCHLSPCAQDSGRCECRAGFWGPLCQHHCDCLHGNCNPLDGHCSCNPGYQGRSCGDPCLAGYYGSQCRYSCGHCKQSQPCSPVDGFCLACDSGWNGTLCKKLCTPGYHGENCAQLCPSCRKGETCHPETGACLNCDPGKTGPSCDAPCPAGTFGDGCRFTCPDCVNGSCDPVAGECICQAGYWGTSCNETCPEGFFGANCSSPCHTHSGDCVLRSKHQGALIAGILIPLLLLLLCVTCCCCCCGTSQLEARDRVAVADGDAVSRMKHHVQGVLANLSSMLPCLSLSGYKLPRVTVSHHDTEIPFNPSFIEPPSAAWASDSSFSSSFDTDDEGPAYCVPAREDVPAVAGFELQEGSSKCHEFPDASAFNSEDVSQPFTIPRTSSIARAKRPSVSFAEGTKFGPQCQRGPMETPNTTRKPKAPWGLTKLPSHQHHADPEEGPQQGGSPGDCYENPEPISEAEDSHRPSPRGTPGGHRMAASSGSHVAQRVEALEAALNPNTLDVRGKEQNVTTIYVTVGTAGKSSKPNERANGSREGTVQAVLKRLGSFQRVKRAFREEPMVRKSTESIQKPPRRALGPERDSRDLFPQPAPPHKDSSKTTGLEPCESPALLTDRHQIDVPVKREPLIPTSPIFERQVAQEGEDGVTGDPKKSESLEETRSLETNEQAVVEEEPKYENVSPNRCPSDEPPATSPDCAANT
SIO_010081: SCARF1
subclass of: SO_0000673
so part of: SCARF1
location: complement(join(466499..467571,468254..468394,468668..468792,469234..469351,470890..470972,471057..471185,472055..472273,473204..473729,474243..474344,475447..475508,477408..477514))
location: region:466499-477514:-1
so has part: feature:477408-477514:-1:exon
so has part: feature:475447-475508:-1:exon
so has part: feature:474243-474344:-1:exon
so has part: feature:473204-473729:-1:exon
so has part: feature:472055-472273:-1:exon
so has part: feature:471057-471185:-1:exon
so has part: feature:470890-470972:-1:exon
so has part: feature:469234-469351:-1:exon
so has part: feature:468668-468792:-1:exon
so has part: feature:468254-468394:-1:exon
so has part: feature:466499-467571:-1:exon

XP_034608220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477408-477514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:475447-475508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474243-474344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473204-473729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472055-472273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471057-471185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:470890-470972:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469234-469351:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:468668-468792:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:468254-468394:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:466499-467571:-1:exon

SCARF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SCARF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scavenger receptor class F member 1 isoform X1
translation: MAQLLLLLFCLHFWPWIGSSAQELDPNGKNVCKATSLSAGLVCCPGWKQEGRDCTAALCEGEDACKVDEVCVRPGICLCKPGFFGANCNSRCPDQYWGSDCKKSCSCHPNGKCDPVSGQCTCNANRWGVLCEFPCQCGPHGHCNTRTGACHCEPGWWGPNCKKQCLCRVAGSHCDPVSGQCVCTQGWWGRRCSLRCNCHLSPCAQDSGRCECRAGFWGPLCQHHCDCLHGNCNPLDGHCSCNPGYQGRSCGDPCLAGYYGSQCRYSCGHCKQSQPCSPVDGFCLACDSGWNGTLCKKLCTPGYHGENCAQLCPSCRKGETCHPETGACLNCDPGKTGPSCDAPCPAGTFGDGCRFTCPDCVNGSCDPVAGECICQAGYWGTSCNETCPEGFFGANCSSPCHTHSGDCVLRSKHQGALIAGILIPLLLLLLCVTCCCCCCGTSQLEARDRVAVADGDAVSRMKHHVQGVLANLSSMLPCLSLSGYKLPRVTVSHHDTEIPFNPSFIEPPSAAWASDSSFSSSFDTDDEGPAYCVPAREDVPAVAGFELQEGSSKCHEFPDASAFNSEDVSQPFTIPRTSSIARAKRPSVSFAEGTKFGPQCQRGPMETPNTTRKPKAPWGLTKLPSHQHHADPEEGPQQGGSPGDCYENPEPISEAEDSHRPSPRGTPGGHRMAASSGSHVAQRVEALEAALNPNTLDVRGKEQNVTTIYVTVGTAGKSSKPNERANGSREGTVQAVLKRLGSFQRVKRAFREEPMVRKSTESIQKPPRRALGPERDSRDLFPQPAPPHKDSSKTTGLEPCESPALLTDRHQIDVPVKREPLIPTSPIFERQVAQEGEDGVTGDPKKSESLEETRSLETNEQAVVEEEPKYENVSPNRCPSDEPPATSPDCAANT
SIO_010081: SCARF1
subclass of: SO_0000673
so part of: SCARF1
location: complement(join(466499..467571,468254..468394,468668..468792,469234..469351,470890..470972,471057..471185,472055..472273,473204..473729,474243..474344,475447..475508,477408..477514))
location: region:466499-477514:-1
so has part: feature:477408-477514:-1:exon
so has part: feature:475447-475508:-1:exon
so has part: feature:474243-474344:-1:exon
so has part: feature:473204-473729:-1:exon
so has part: feature:472055-472273:-1:exon
so has part: feature:471057-471185:-1:exon
so has part: feature:470890-470972:-1:exon
so has part: feature:469234-469351:-1:exon
so has part: feature:468668-468792:-1:exon
so has part: feature:468254-468394:-1:exon
so has part: feature:466499-467571:-1:exon

XP_034608221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477408-477514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:475447-475508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474243-474344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473204-473729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472055-472273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471057-471185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:470890-470972:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469234-469351:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:468668-468792:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:468254-468394:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:466499-467571:-1:exon

RILP
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: RILP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(478813..494867)
location: region:478813-494867:-1
so has part: feature:478813-494867:-1:exon
subclass of: SO_0000010

117867370
type: Gene
SIO_000068: ncbigene

position:478813:-1
position: 478813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494867:-1
position: 494867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478813-494867:-1:exon

RILP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: RILP
product: Rab interacting lysosomal protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_034752332.1
SIO_010081: RILP
subclass of: SO_0000673
so part of: RILP
location: complement(join(478813..479982,481082..481144,488098..488220,489023..489186,490629..490817,491109..491230,494011..494134,494581..494867))
location: region:478813-494867:-1
so has part: feature:494581-494867:-1:exon
so has part: feature:494011-494134:-1:exon
so has part: feature:491109-491230:-1:exon
so has part: feature:490629-490817:-1:exon
so has part: feature:489023-489186:-1:exon
so has part: feature:488098-488220:-1:exon
so has part: feature:481082-481144:-1:exon
so has part: feature:478813-479982:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:494581-494867:-1:exon

position:494581:-1
position: 494581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:494011-494134:-1:exon

position:494011:-1
position: 494011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494134:-1
position: 494134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:491109-491230:-1:exon

position:491109:-1
position: 491109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491230:-1
position: 491230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:490629-490817:-1:exon

position:490629:-1
position: 490629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490817:-1
position: 490817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:489023-489186:-1:exon

position:489023:-1
position: 489023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489186:-1
position: 489186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:488098-488220:-1:exon

position:488098:-1
position: 488098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488220:-1
position: 488220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:481082-481144:-1:exon

position:481082:-1
position: 481082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481144:-1
position: 481144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:478813-479982:-1:exon

position:479982:-1
position: 479982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RILP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: RILP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab-interacting lysosomal protein
translation: MAGALGAELQRLSGRFGPEAVAGLVPQVVRLLELLEALAGPAGAEPGGRDPAESLLRTGPSLRGERRREEAAAPGAEDLEQKLSEAQRKEHVLQSRLAQLEEENQKLLAQLAESHSQEDSTLRKEREVMLRLKEVVDKQRDEIRAQAHEIVCKNHDTEALQEQLNRFMSMNEDLRHKLAVVQVQLKSSLEKKEDLETRVLENQREIDRLTRAASGASPRLNMDGAAAPVEELQHQDCGRNSAPSCFCKEELKQILQERNELKTSLFLVQEELAYYQRELLNDERIPSFLLDAMKSTIKKQRKKIRAKMLGTVEEPVSSDEDESADCVDSQPRESKIKSFFGLWYHSSSKDPPNPGCSGVWEIIDSQDVHFEQEEENKPTPGSPDRVVPPP
SIO_010081: RILP
subclass of: SO_0000673
so part of: RILP
location: complement(join(479826..479982,481082..481144,488098..488220,489023..489186,490629..490817,491109..491230,494011..494134,494581..494811))
location: region:479826-494811:-1
so has part: feature:494581-494811:-1:exon
so has part: feature:494011-494134:-1:exon
so has part: feature:491109-491230:-1:exon
so has part: feature:490629-490817:-1:exon
so has part: feature:489023-489186:-1:exon
so has part: feature:488098-488220:-1:exon
so has part: feature:481082-481144:-1:exon
so has part: feature:479826-479982:-1:exon

XP_034608223.1
type: Protein
SIO_000068: ncbiprotein

position:479826:-1
position: 479826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494811:-1
position: 494811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494581-494811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494011-494134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491109-491230:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:490629-490817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:489023-489186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:488098-488220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:481082-481144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:479826-479982:-1:exon

PRPF8
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: PRPF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(496770..529290)
location: region:496770-529290:-1
so has part: feature:496770-529290:-1:exon
subclass of: SO_0000010

117867410
type: Gene
SIO_000068: ncbigene

position:496770:-1
position: 496770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529290:-1
position: 529290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496770-529290:-1:exon

PRPF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PRPF8
product: pre-mRNA processing factor 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_034752411.1
SIO_010081: PRPF8
subclass of: SO_0000673
so part of: PRPF8
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urn:…
SIO_000300: 1
SIO_000628: feature:528469-528568:-1:exon

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urn:…
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SIO_000628: feature:527536-527704:-1:exon

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urn:…
SIO_000300: 3
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urn:…
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:523581-523706:-1:exon

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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:521897-522087:-1:exon

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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:518567-518730:-1:exon

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urn:…
SIO_000300: 17
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SIO_000300: 18
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urn:…
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SIO_000300: 20
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SIO_000300: 22
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SIO_000300: 23
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SIO_000300: 24
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SIO_000300: 25
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SIO_000300: 26
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SIO_000300: 27
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SIO_000300: 29
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SIO_000300: 30
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SIO_000300: 31
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SIO_000300: 32
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SIO_000300: 33
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SIO_000300: 34
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SIO_000300: 35
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urn:…
SIO_000300: 36
SIO_000628: feature:501170-501363:-1:exon

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SIO_000300: 37
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urn:…
SIO_000300: 38
SIO_000628: feature:500231-500372:-1:exon

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urn:…
SIO_000300: 39
SIO_000628: feature:499722-499862:-1:exon

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urn:…
SIO_000300: 40
SIO_000628: feature:499231-499370:-1:exon

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urn:…
SIO_000300: 41
SIO_000628: feature:498147-498349:-1:exon

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urn:…
SIO_000300: 42
SIO_000628: feature:496770-497164:-1:exon

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PRPF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PRPF8
product: pre-mRNA processing factor 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_034752410.1
SIO_010081: PRPF8
subclass of: SO_0000673
so part of: PRPF8
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location: region:497010-529290:-1
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position:497010:-1
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reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:529187-529290:-1:exon

position:529187:-1
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urn:…
SIO_000300: 2
SIO_000628: feature:528469-528579:-1:exon

position:528579:-1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:527536-527704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525200-525364:-1:exon

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SIO_000628: feature:524901-525119:-1:exon

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SIO_000628: feature:523986-524198:-1:exon

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SIO_000300: 7
SIO_000628: feature:523581-523706:-1:exon

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SIO_000300: 8
SIO_000628: feature:523395-523500:-1:exon

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SIO_000300: 9
SIO_000628: feature:521897-522087:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:521402-521521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:521126-521315:-1:exon

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SIO_000300: 12
SIO_000628: feature:520681-520800:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:520191-520325:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:519957-520086:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:519125-519321:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:518827-519033:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:518567-518730:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:518050-518176:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:517684-517876:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:517088-517275:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:516565-516803:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:515622-515768:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:515102-515312:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:514171-514287:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:513840-514087:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:513416-513595:-1:exon

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SIO_000628: feature:512009-512144:-1:exon

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SIO_000628: feature:511227-511396:-1:exon

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SIO_000628: feature:509621-509750:-1:exon

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SIO_000628: feature:509224-509370:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:508691-508851:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:507779-507970:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:506799-507036:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:506385-506513:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:505599-505712:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:505160-505333:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:501170-501363:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:500470-500709:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:500231-500372:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:499722-499862:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:499231-499370:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:498147-498349:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:497010-497164:-1:exon

PRPF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PRPF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-processing-splicing factor 8
translation: MAGVFPYRGGCAPVPSPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLYHITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYRLANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRRALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGINNLQDVWETCEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATEVAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVA…
SIO_010081: PRPF8
subclass of: SO_0000673
so part of: PRPF8
location: complement(join(497010..497164,498147..498349,499231..499370,499722..499862,500231..500372,500470..500709,501170..501363,505160..505333,505599..505712,506385..506513,506799..507036,507779..507970,508691..508851,509224..509370,509621..509750,511227..511396,512009..512144,513416..513595,513840..514087,514171..514287,515102..515312,515622..515768,516565..516803,517088..517275,517684..517876,518050..518176,518567..518730,518827..519033,519125..519321,519957..520086,520191..520325,520681..520800,521126..521315,521402..521521,521897..522087,523395..523500,523581..523706,523986..524198,524901..525119,525200..525364,527536..527704,528469..528568))
location: region:497010-528568:-1
so has part: feature:528469-528568:-1:exon
so has part: feature:527536-527704:-1:exon
so has part: feature:525200-525364:-1:exon
so has part: feature:524901-525119:-1:exon
so has part: feature:523986-524198:-1:exon
so has part: feature:523581-523706:-1:exon
so has part: feature:523395-523500:-1:exon
so has part: feature:521897-522087:-1:exon
so has part: feature:521402-521521:-1:exon
so has part: feature:521126-521315:-1:exon
so has part: feature:520681-520800:-1:exon
so has part: feature:520191-520325:-1:exon
so has part: feature:519957-520086:-1:exon
so has part: feature:519125-519321:-1:exon
so has part: feature:518827-519033:-1:exon
so has part: feature:518567-518730:-1:exon
so has part: feature:518050-518176:-1:exon
so has part: feature:517684-517876:-1:exon
so has part: feature:517088-517275:-1:exon
so has part: feature:516565-516803:-1:exon
so has part: feature:515622-515768:-1:exon
so has part: feature:515102-515312:-1:exon
so has part: feature:514171-514287:-1:exon
so has part: feature:513840-514087:-1:exon
so has part: feature:513416-513595:-1:exon
so has part: feature:512009-512144:-1:exon
so has part: feature:511227-511396:-1:exon
so has part: feature:509621-509750:-1:exon
so has part: feature:509224-509370:-1:exon
so has part: feature:508691-508851:-1:exon
so has part: feature:507779-507970:-1:exon
so has part: feature:506799-507036:-1:exon
so has part: feature:506385-506513:-1:exon
so has part: feature:505599-505712:-1:exon
so has part: feature:505160-505333:-1:exon
so has part: feature:501170-501363:-1:exon
so has part: feature:500470-500709:-1:exon
so has part: feature:500231-500372:-1:exon
so has part: feature:499722-499862:-1:exon
so has part: feature:499231-499370:-1:exon
so has part: feature:498147-498349:-1:exon
so has part: feature:497010-497164:-1:exon

XP_034608301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528469-528568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527536-527704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525200-525364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524901-525119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523986-524198:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523581-523706:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:523395-523500:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521897-522087:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:521402-521521:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:521126-521315:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:520681-520800:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:520191-520325:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519957-520086:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:519125-519321:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:518827-519033:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:518567-518730:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:518050-518176:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:517684-517876:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:517088-517275:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:516565-516803:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:515622-515768:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:515102-515312:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:514171-514287:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:513840-514087:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:513416-513595:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:512009-512144:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:511227-511396:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:509621-509750:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:509224-509370:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:508691-508851:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:507779-507970:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:506799-507036:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:506385-506513:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:505599-505712:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:505160-505333:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:501170-501363:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:500470-500709:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:500231-500372:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:499722-499862:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:499231-499370:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:498147-498349:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:497010-497164:-1:exon

PRPF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PRPF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-processing-splicing factor 8
translation: MAGVFPYRGGCAPVPSPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLYHITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYRLANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRRALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGINNLQDVWETCEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATEVAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVA…
SIO_010081: PRPF8
subclass of: SO_0000673
so part of: PRPF8
location: complement(join(497010..497164,498147..498349,499231..499370,499722..499862,500231..500372,500470..500709,501170..501363,505160..505333,505599..505712,506385..506513,506799..507036,507779..507970,508691..508851,509224..509370,509621..509750,511227..511396,512009..512144,513416..513595,513840..514087,514171..514287,515102..515312,515622..515768,516565..516803,517088..517275,517684..517876,518050..518176,518567..518730,518827..519033,519125..519321,519957..520086,520191..520325,520681..520800,521126..521315,521402..521521,521897..522087,523395..523500,523581..523706,523986..524198,524901..525119,525200..525364,527536..527704,528469..528568))
location: region:497010-528568:-1
so has part: feature:528469-528568:-1:exon
so has part: feature:527536-527704:-1:exon
so has part: feature:525200-525364:-1:exon
so has part: feature:524901-525119:-1:exon
so has part: feature:523986-524198:-1:exon
so has part: feature:523581-523706:-1:exon
so has part: feature:523395-523500:-1:exon
so has part: feature:521897-522087:-1:exon
so has part: feature:521402-521521:-1:exon
so has part: feature:521126-521315:-1:exon
so has part: feature:520681-520800:-1:exon
so has part: feature:520191-520325:-1:exon
so has part: feature:519957-520086:-1:exon
so has part: feature:519125-519321:-1:exon
so has part: feature:518827-519033:-1:exon
so has part: feature:518567-518730:-1:exon
so has part: feature:518050-518176:-1:exon
so has part: feature:517684-517876:-1:exon
so has part: feature:517088-517275:-1:exon
so has part: feature:516565-516803:-1:exon
so has part: feature:515622-515768:-1:exon
so has part: feature:515102-515312:-1:exon
so has part: feature:514171-514287:-1:exon
so has part: feature:513840-514087:-1:exon
so has part: feature:513416-513595:-1:exon
so has part: feature:512009-512144:-1:exon
so has part: feature:511227-511396:-1:exon
so has part: feature:509621-509750:-1:exon
so has part: feature:509224-509370:-1:exon
so has part: feature:508691-508851:-1:exon
so has part: feature:507779-507970:-1:exon
so has part: feature:506799-507036:-1:exon
so has part: feature:506385-506513:-1:exon
so has part: feature:505599-505712:-1:exon
so has part: feature:505160-505333:-1:exon
so has part: feature:501170-501363:-1:exon
so has part: feature:500470-500709:-1:exon
so has part: feature:500231-500372:-1:exon
so has part: feature:499722-499862:-1:exon
so has part: feature:499231-499370:-1:exon
so has part: feature:498147-498349:-1:exon
so has part: feature:497010-497164:-1:exon

XP_034608302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528469-528568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527536-527704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525200-525364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524901-525119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523986-524198:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523581-523706:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:523395-523500:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521897-522087:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:521402-521521:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:521126-521315:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:520681-520800:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:520191-520325:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519957-520086:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:519125-519321:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:518827-519033:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:518567-518730:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:518050-518176:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:517684-517876:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:517088-517275:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:516565-516803:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:515622-515768:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:515102-515312:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:514171-514287:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:513840-514087:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:513416-513595:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:512009-512144:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:511227-511396:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:509621-509750:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:509224-509370:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:508691-508851:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:507779-507970:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:506799-507036:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:506385-506513:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:505599-505712:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:505160-505333:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:501170-501363:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:500470-500709:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:500231-500372:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:499722-499862:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:499231-499370:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:498147-498349:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:497010-497164:-1:exon

TLCD2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: TLCD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(532142..543781)
location: region:532142-543781:-1
so has part: feature:532142-543781:-1:exon
subclass of: SO_0000010

117867561
type: Gene
SIO_000068: ncbigene

position:532142:-1
position: 532142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543781:-1
position: 543781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532142-543781:-1:exon

TLCD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TLCD2
product: TLC domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_034752722.1
SIO_010081: TLCD2
subclass of: SO_0000673
so part of: TLCD2
location: complement(join(532142..536897,540573..540655,543212..543294,543487..543781))
location: region:532142-543781:-1
so has part: feature:543487-543781:-1:exon
so has part: feature:543212-543294:-1:exon
so has part: feature:540573-540655:-1:exon
so has part: feature:532142-536897:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:543487-543781:-1:exon

position:543487:-1
position: 543487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:543212-543294:-1:exon

position:543212:-1
position: 543212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543294:-1
position: 543294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:540573-540655:-1:exon

position:540573:-1
position: 540573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540655:-1
position: 540655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:532142-536897:-1:exon

position:536897:-1
position: 536897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TLCD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TLCD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TLC domain-containing protein 2
translation: MGLSPGLLLVGGSFAAFRLLNRGLERLVPPPRAALRNRWKWRNIWTSFAHSLLSGAGALLGFYFHPQMAEDLIGTHSPAARSVVSVSIGYFLQDFVDMLCNQKLHQSWELLFHHSVVIICFSVAVLVHQYIGFALVALLVEINSIFLHLRQILLMANLVHTTCYRLNSIINLGTYVVFRITTLAWMTRWLVLNRENIPLATYTVGTVGMAIMTPMNIILFYRLLRSDFLKSSREVWREKEK
SIO_010081: TLCD2
subclass of: SO_0000673
so part of: TLCD2
location: complement(join(536520..536897,540573..540655,543212..543294,543487..543668))
location: region:536520-543668:-1
so has part: feature:543487-543668:-1:exon
so has part: feature:543212-543294:-1:exon
so has part: feature:540573-540655:-1:exon
so has part: feature:536520-536897:-1:exon

XP_034608613.1
type: Protein
SIO_000068: ncbiprotein

position:536520:-1
position: 536520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543668:-1
position: 543668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543487-543668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:543212-543294:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540573-540655:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536520-536897:-1:exon

LOC117867647
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117867647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 547871..563474
location: region:547871-563474:1
so has part: feature:547871-563474:1:exon
subclass of: SO_0000010

117867647
type: Gene
SIO_000068: ncbigene

position:547871:1
position: 547871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563474:1
position: 563474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547871-563474:1:exon

LOC117867647
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117867647
product: apoptosis-inducing factor 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_034752848.1
SIO_010081: LOC117867647
subclass of: SO_0000673
so part of: LOC117867647
location: join(547871..548036,552375..552468,553014..553123,555882..555991,556839..556883,556978..557059,557242..557354,557809..557895,558346..558437,558593..558723,559372..559487,560057..560128,560458..560521,561070..561146,561233..561350,561783..561881,562330..562405,563073..563177,563308..563474)
location: region:547871-563474:1
so has part: feature:547871-548036:1:exon
so has part: feature:552375-552468:1:exon
so has part: feature:553014-553123:1:exon
so has part: feature:555882-555991:1:exon
so has part: feature:556839-556883:1:exon
so has part: feature:556978-557059:1:exon
so has part: feature:557242-557354:1:exon
so has part: feature:557809-557895:1:exon
so has part: feature:558346-558437:1:exon
so has part: feature:558593-558723:1:exon
so has part: feature:559372-559487:1:exon
so has part: feature:560057-560128:1:exon
so has part: feature:560458-560521:1:exon
so has part: feature:561070-561146:1:exon
so has part: feature:561233-561350:1:exon
so has part: feature:561783-561881:1:exon
so has part: feature:562330-562405:1:exon
so has part: feature:563073-563177:1:exon
so has part: feature:563308-563474:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547871-548036:1:exon

position:548036:1
position: 548036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:552375-552468:1:exon

position:552375:1
position: 552375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552468:1
position: 552468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:553014-553123:1:exon

position:553014:1
position: 553014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553123:1
position: 553123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:555882-555991:1:exon

position:555882:1
position: 555882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555991:1
position: 555991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:556839-556883:1:exon

position:556839:1
position: 556839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556883:1
position: 556883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:556978-557059:1:exon

position:556978:1
position: 556978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557059:1
position: 557059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:557242-557354:1:exon

position:557242:1
position: 557242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557354:1
position: 557354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:557809-557895:1:exon

position:557809:1
position: 557809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557895:1
position: 557895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:558346-558437:1:exon

position:558346:1
position: 558346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558437:1
position: 558437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:558593-558723:1:exon

position:558593:1
position: 558593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558723:1
position: 558723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:559372-559487:1:exon

position:559372:1
position: 559372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559487:1
position: 559487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:560057-560128:1:exon

position:560057:1
position: 560057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560128:1
position: 560128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:560458-560521:1:exon

position:560458:1
position: 560458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560521:1
position: 560521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:561070-561146:1:exon

position:561070:1
position: 561070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561146:1
position: 561146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:561233-561350:1:exon

position:561233:1
position: 561233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561350:1
position: 561350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:561783-561881:1:exon

position:561783:1
position: 561783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561881:1
position: 561881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:562330-562405:1:exon

position:562330:1
position: 562330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562405:1
position: 562405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:563073-563177:1:exon

position:563073:1
position: 563073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563177:1
position: 563177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:563308-563474:1:exon

position:563308:1
position: 563308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117867647
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117867647
product: apoptosis-inducing factor 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_034752849.1
SIO_010081: LOC117867647
subclass of: SO_0000673
so part of: LOC117867647
location: join(547871..548036,552379..552468,553014..553123,555882..555991,556839..556883,556978..557059,557242..557354,557809..557895,558346..558437,558593..558723,559372..559487,560057..560128,560458..560521,561070..561146,561233..561350,561783..561881,562330..562405,563073..563177,563308..563474)
location: region:547871-563474:1
so has part: feature:547871-548036:1:exon
so has part: feature:552379-552468:1:exon
so has part: feature:553014-553123:1:exon
so has part: feature:555882-555991:1:exon
so has part: feature:556839-556883:1:exon
so has part: feature:556978-557059:1:exon
so has part: feature:557242-557354:1:exon
so has part: feature:557809-557895:1:exon
so has part: feature:558346-558437:1:exon
so has part: feature:558593-558723:1:exon
so has part: feature:559372-559487:1:exon
so has part: feature:560057-560128:1:exon
so has part: feature:560458-560521:1:exon
so has part: feature:561070-561146:1:exon
so has part: feature:561233-561350:1:exon
so has part: feature:561783-561881:1:exon
so has part: feature:562330-562405:1:exon
so has part: feature:563073-563177:1:exon
so has part: feature:563308-563474:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547871-548036:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552379-552468:1:exon

position:552379:1
position: 552379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:553014-553123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555882-555991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:556839-556883:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556978-557059:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557242-557354:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557809-557895:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:558346-558437:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:558593-558723:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:559372-559487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:560057-560128:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:560458-560521:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:561070-561146:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:561233-561350:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:561783-561881:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:562330-562405:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:563073-563177:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:563308-563474:1:exon

LOC117867647
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117867647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apoptosis-inducing factor 3-like
translation: MDTEDSITEQVCQESDVQDGELREVEVAGHTVLLVRNKMEFSAVGSKCTHAGASLSKGVLAGNRLRCPWHGACFNIRTGDIEEYPTLDCLPCFKVRVEDGKVFITAKKKDLESDRKLKAMSERCRSNKNTMLLLGGGTAALVCAETLRQEGFTGRIIMVTKEKHVPYDRTQLSKAMDKTLESIYLRQQDFFEAHGIEVWTDKEVVSVDTQGQKAHFQDGAFQRYDQLLIATGSSPRQLQCPGSDLENVCSLQTPEDANRILHLATGKRVVILGASFIGMEVAAFLSDKASTICVVEREEFPFQAVLGPQVGGVAMKMLQNKRVKFYMKAEISELQGKNRKVTEAVLASGEKLPADVVVVGIGVASNSAFLKDTSIAMDRRGAILVDLFMQTNVPRVFAAGDVTSFPVTLFGGMTATIRHWQIAQAHGHIAALNMLKKQKALHTVPFFWTSLLGKSIRYAGYGKGYTETVVKGDLEQLKFLVFYIKDDYVIAVASLNFDPMVSLVAEVMYSGRQISKAEAQSSDITWMKQA
SIO_010081: LOC117867647
subclass of: SO_0000673
so part of: LOC117867647
location: join(552407..552468,553014..553123,555882..555991,556839..556883,556978..557059,557242..557354,557809..557895,558346..558437,558593..558723,559372..559487,560057..560128,560458..560521,561070..561146,561233..561350,561783..561881,562330..562405,563073..563177,563308..563341)
location: region:552407-563341:1
so has part: feature:552407-552468:1:exon
so has part: feature:553014-553123:1:exon
so has part: feature:555882-555991:1:exon
so has part: feature:556839-556883:1:exon
so has part: feature:556978-557059:1:exon
so has part: feature:557242-557354:1:exon
so has part: feature:557809-557895:1:exon
so has part: feature:558346-558437:1:exon
so has part: feature:558593-558723:1:exon
so has part: feature:559372-559487:1:exon
so has part: feature:560057-560128:1:exon
so has part: feature:560458-560521:1:exon
so has part: feature:561070-561146:1:exon
so has part: feature:561233-561350:1:exon
so has part: feature:561783-561881:1:exon
so has part: feature:562330-562405:1:exon
so has part: feature:563073-563177:1:exon
so has part: feature:563308-563341:1:exon

XP_034608739.1
type: Protein
SIO_000068: ncbiprotein

position:552407:1
position: 552407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563341:1
position: 563341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552407-552468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553014-553123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555882-555991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:556839-556883:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:556978-557059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557242-557354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557809-557895:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558346-558437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:558593-558723:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:559372-559487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:560057-560128:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:560458-560521:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:561070-561146:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:561233-561350:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:561783-561881:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:562330-562405:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:563073-563177:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:563308-563341:1:exon

LOC117867647
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117867647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apoptosis-inducing factor 3-like
translation: MDTEDSITEQVCQESDVQDGELREVEVAGHTVLLVRNKMEFSAVGSKCTHAGASLSKGVLAGNRLRCPWHGACFNIRTGDIEEYPTLDCLPCFKVRVEDGKVFITAKKKDLESDRKLKAMSERCRSNKNTMLLLGGGTAALVCAETLRQEGFTGRIIMVTKEKHVPYDRTQLSKAMDKTLESIYLRQQDFFEAHGIEVWTDKEVVSVDTQGQKAHFQDGAFQRYDQLLIATGSSPRQLQCPGSDLENVCSLQTPEDANRILHLATGKRVVILGASFIGMEVAAFLSDKASTICVVEREEFPFQAVLGPQVGGVAMKMLQNKRVKFYMKAEISELQGKNRKVTEAVLASGEKLPADVVVVGIGVASNSAFLKDTSIAMDRRGAILVDLFMQTNVPRVFAAGDVTSFPVTLFGGMTATIRHWQIAQAHGHIAALNMLKKQKALHTVPFFWTSLLGKSIRYAGYGKGYTETVVKGDLEQLKFLVFYIKDDYVIAVASLNFDPMVSLVAEVMYSGRQISKAEAQSSDITWMKQA
SIO_010081: LOC117867647
subclass of: SO_0000673
so part of: LOC117867647
location: join(552407..552468,553014..553123,555882..555991,556839..556883,556978..557059,557242..557354,557809..557895,558346..558437,558593..558723,559372..559487,560057..560128,560458..560521,561070..561146,561233..561350,561783..561881,562330..562405,563073..563177,563308..563341)
location: region:552407-563341:1
so has part: feature:552407-552468:1:exon
so has part: feature:553014-553123:1:exon
so has part: feature:555882-555991:1:exon
so has part: feature:556839-556883:1:exon
so has part: feature:556978-557059:1:exon
so has part: feature:557242-557354:1:exon
so has part: feature:557809-557895:1:exon
so has part: feature:558346-558437:1:exon
so has part: feature:558593-558723:1:exon
so has part: feature:559372-559487:1:exon
so has part: feature:560057-560128:1:exon
so has part: feature:560458-560521:1:exon
so has part: feature:561070-561146:1:exon
so has part: feature:561233-561350:1:exon
so has part: feature:561783-561881:1:exon
so has part: feature:562330-562405:1:exon
so has part: feature:563073-563177:1:exon
so has part: feature:563308-563341:1:exon

XP_034608740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552407-552468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553014-553123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555882-555991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:556839-556883:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:556978-557059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557242-557354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557809-557895:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558346-558437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:558593-558723:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:559372-559487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:560057-560128:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:560458-560521:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:561070-561146:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:561233-561350:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:561783-561881:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:562330-562405:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:563073-563177:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:563308-563341:1:exon

WDR81
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: WDR81
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 597298..610691
location: region:597298-610691:1
so has part: feature:597298-610691:1:exon
subclass of: SO_0000010

117867421
type: Gene
SIO_000068: ncbigene

position:597298:1
position: 597298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610691:1
position: 610691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597298-610691:1:exon

WDR81
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: WDR81
product: WD repeat domain 81
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_034752430.1
SIO_010081: WDR81
subclass of: SO_0000673
so part of: WDR81
location: join(597298..601224,601620..601727,601940..602130,604372..604562,604895..605060,605195..605360,605729..606427,607028..607173,607411..607590,608686..610691)
location: region:597298-610691:1
so has part: feature:597298-601224:1:exon
so has part: feature:601620-601727:1:exon
so has part: feature:601940-602130:1:exon
so has part: feature:604372-604562:1:exon
so has part: feature:604895-605060:1:exon
so has part: feature:605195-605360:1:exon
so has part: feature:605729-606427:1:exon
so has part: feature:607028-607173:1:exon
so has part: feature:607411-607590:1:exon
so has part: feature:608686-610691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597298-601224:1:exon

position:601224:1
position: 601224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:601620-601727:1:exon

position:601620:1
position: 601620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601727:1
position: 601727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:601940-602130:1:exon

position:601940:1
position: 601940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602130:1
position: 602130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:604372-604562:1:exon

position:604372:1
position: 604372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604562:1
position: 604562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:604895-605060:1:exon

position:604895:1
position: 604895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605060:1
position: 605060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:605195-605360:1:exon

position:605195:1
position: 605195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605360:1
position: 605360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:605729-606427:1:exon

position:605729:1
position: 605729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606427:1
position: 606427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:607028-607173:1:exon

position:607028:1
position: 607028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607173:1
position: 607173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:607411-607590:1:exon

position:607411:1
position: 607411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607590:1
position: 607590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:608686-610691:1:exon

position:608686:1
position: 608686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR81
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: WDR81
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 81
translation: MECFLRSVEKDLNIDHRQLTAAVEGTHLIAFVPVKWLVSLKERRVLPSLCPRPEGLSEVEVRTFLQHSVQKLPAGWTRVEIHALRKERLAYPLTLHHSAQDDRVGRLETLHGFMQNVASQNYRNLWHRAHRLYVQPCCHAHTPPTVLALDMLRVALQKIYGCPFLQVGRSVQYASPAKEGSTATKGTSSCPNILRPEALLESANMLYIIYPYVQYCLHDIVTFSPAKLTNSHAKVLFILFHVLQAMRACHQAGLPCGPFSLRDVAVDEKLCTRLRINLREYEKLKEEERDPRADEAQRAEESRAVEWTGKEARCTTCEEELRGLVLDWVHGRVSNFHYLMQLNRLSGRRMGDPNYHPVLPWVVDFTTKNGKFRDLRKSKFRLNKGDKQLDFTYEMTKQAFAAGGSSGEQLHVPHHISDVLSDITYYVYTARRTPKAVLCCHVRSQWEPNEYPASMERMQSWTPDECIPEFYTDSTIFKSIHSDMPDLDVPSWCSSYEEFIEVHRKLLESREVSQDLHHWIDLTFGYKLLGKDAVKEKNVCLHLVDNHTHLTSYGVVQLFDQPHPRRMVGLAYIPAEAPVIARPLIQNARETIVLEDVQAQMGDGVNGLVLEATPCETIWSGEKSISGEDDLEQGTEALDSIPAASRAADQPCPCTPSAQPSNLPAYPTEGKTSSAWPNRRSKPGVVDQAERDKMKITLPEGFNPVQALEELEKLDNFLVKGLNSEMELMEQPQVEPPLGLSDLFQRDMQALGVLIAEVVFAPRVRTLKPDASLLERFLTVRNLCRYHPKEIPAPLQHVLETLLQLNMPEGRRLKNKVAKNRVQLFEYKPVSQGLPPPSPSQFLSSFSSVVPFPPYFPSLHKFIFTYQSKKVEDESQGRELVFQLWQQLEGILCEITPEGLEILLPFILSLMSEENTAVYTAWYLFEPIAKALGPKNANKYLLKPLIGAYENPCCLHGRFYLYTDCFVAQLMVRLGLQSFLSNLLAHILQILVGVESSQEESKSLLGTAEDEESGGGSPVSCAFGEEIKMDVDHGSTALDLLDYTSGVSFHDQAYLPETEDFQSGLYVSESLQSQEQELLSLGRLSDKSSASEVSLGEDRPADGDSQKDKSSLKSVDSSQELKQSEDSEEEEEVEEEEEEEEATVATELTLSGGTGASLDAALADDHSEPEEGDEQELHDHSEDKEQTILLDTACKMVRWLSAKLGPTVTSRCVARNLLRLLTSCYVGPTRQQFVPSNEENSPLNAGNIYQKRPVLGDQVSKPVLACLMYMAYLYGEPVLTYQYLPYISYLVAPSSGVGSGRLNSRKEAGLLAAVTLTQKIIVCLSDTTLMDILPKISQEVLLPVLGFLTSPAIGFPSGAQARIVLCVKTISLIALICLRIGQEMVQQHLSDTVGTFFGAFSLLQELQEQGLSSESLSHGETPELEVPFSDGRVLPLDTAMLAELQKVFSPEMAYTTYVPFSCLLGDVIRTIVPNHSLVGRLANLYLESVNPKSLPLVSQEPALGTACLDQDARGSEPSSSHHEDSHSGTFGSVLVGNRIQVPADTQYASSGSLCFSPRADGFCPSSASEENALKQDLPRSSHMLCGNWLAYWQYEIGVSQHDPRFHFHQIKLQSFLGHTGAIKCVAPLGCEDFFLSGSKDKTVRLWPLYNSGDGTNEMEPRLTYAQHKKSVFYVSQLEAPQQVVSCDGTVHVWDQFTGKLLRTFDALDSKVPITAVTTMPSPHSSICVASADSVLRFIDHRKPGLQHEFRLASGVSAGLIRCLAVSPNGRSVMAGFSSGFIVLLDTRTGLILRGWPAHEGDILQIKAAEGSVLISSSSDHSLTVWKELEQKPLHQYKSASDPIHAFDLYGSEVVTGTVANKIGVYSMLESSAFPTSTTKLSSENFRGTLTSLAVLPTKCHLLLGSDNGVIRLLA
SIO_010081: WDR81
subclass of: SO_0000673
so part of: WDR81
location: join(597654..601224,601620..601727,601940..602130,604372..604562,604895..605060,605195..605360,605729..606427,607028..607173,607411..607590,608686..609012)
location: region:597654-609012:1
so has part: feature:597654-601224:1:exon
so has part: feature:601620-601727:1:exon
so has part: feature:601940-602130:1:exon
so has part: feature:604372-604562:1:exon
so has part: feature:604895-605060:1:exon
so has part: feature:605195-605360:1:exon
so has part: feature:605729-606427:1:exon
so has part: feature:607028-607173:1:exon
so has part: feature:607411-607590:1:exon
so has part: feature:608686-609012:1:exon

XP_034608321.1
type: Protein
SIO_000068: ncbiprotein

position:597654:1
position: 597654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609012:1
position: 609012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597654-601224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:601620-601727:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:601940-602130:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604372-604562:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604895-605060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605195-605360:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:605729-606427:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607028-607173:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607411-607590:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:608686-609012:1:exon

SERPINF2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SERPINF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 614834..624510
location: region:614834-624510:1
so has part: feature:614834-624510:1:exon
subclass of: SO_0000010

117867529
type: Gene
SIO_000068: ncbigene

position:614834:1
position: 614834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624510:1
position: 624510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614834-624510:1:exon

SERPINF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SERPINF2
product: serpin family F member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_034752664.1
SIO_010081: SERPINF2
subclass of: SO_0000673
so part of: SERPINF2
location: join(614834..614960,616249..616312,616976..617044,618420..618494,619037..619493,619845..619988,620232..620435,621321..621463,622050..622254,623588..624510)
location: region:614834-624510:1
so has part: feature:614834-614960:1:exon
so has part: feature:616249-616312:1:exon
so has part: feature:616976-617044:1:exon
so has part: feature:618420-618494:1:exon
so has part: feature:619037-619493:1:exon
so has part: feature:619845-619988:1:exon
so has part: feature:620232-620435:1:exon
so has part: feature:621321-621463:1:exon
so has part: feature:622050-622254:1:exon
so has part: feature:623588-624510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614834-614960:1:exon

position:614960:1
position: 614960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:616249-616312:1:exon

position:616249:1
position: 616249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616312:1
position: 616312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616976-617044:1:exon

position:616976:1
position: 616976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617044:1
position: 617044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:618420-618494:1:exon

position:618420:1
position: 618420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618494:1
position: 618494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:619037-619493:1:exon

position:619037:1
position: 619037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619493:1
position: 619493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:619845-619988:1:exon

position:619845:1
position: 619845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619988:1
position: 619988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:620232-620435:1:exon

position:620232:1
position: 620232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620435:1
position: 620435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:621321-621463:1:exon

position:621321:1
position: 621321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621463:1
position: 621463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:622050-622254:1:exon

position:622050:1
position: 622050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622254:1
position: 622254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:623588-624510:1:exon

position:623588:1
position: 623588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SERPINF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SERPINF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-2-antiplasmin isoform X2
translation: MPVTAWQAWAGQGASSAPCRAIGWVERVPAPTEMLSKPRNTAMLLWGLLLCFSTLHDSPGFPLAHALEMKTPPSDHAPQERPEGPAVENATSKENPEWDPSAQPLTSQHSEEAGALEGEPQFVPTTTVLPGVDPTLPNAAVSDSTSDTWEDIHGATLPLPTTSSTTSPGAGLTSSGGHLVTGTVGDHKQVLEVQEVDSSEEEGEGQERGCDMSQEQTRRLAEGLMKFTIDLLTEVQMETSRPNVILSPLSITLALSQLALGAANQTEKRLLEALHLESVPCLHHLLSSIRRQLTGSMLSVASRIYLQKGFEVKEKFLETSERFYGAKPVTLSGNNENDLIAINKWIKEATEGQISTFLDQLPASTVMLLLNAVHFQGFWRHKFDPSQTGPDVFHLDDQFIVPVEMMKAQKYSLSWFTLDPLEVQVARFPFKGNMSFVAIVPNQFKWNVSQVLANLSHDKLHSRFPKEKPTMVKMPKLHVDYQLELNQVLSQLGLRELFSAPDLQKITDEPLFVSSIQHQSTLELAEDGVEASAATSVMMSRSLSTFSLNQPFLFIIFEETTGIPLFVGSIQNPNPSAAQQKKEPQDSPNLKNGIKNSIPK
SIO_010081: SERPINF2
subclass of: SO_0000673
so part of: SERPINF2
location: join(614845..614960,616249..616312,616976..617044,618420..618494,619037..619493,619845..619988,620232..620435,621321..621463,622050..622254,623588..623913)
location: region:614845-623913:1
so has part: feature:614845-614960:1:exon
so has part: feature:616249-616312:1:exon
so has part: feature:616976-617044:1:exon
so has part: feature:618420-618494:1:exon
so has part: feature:619037-619493:1:exon
so has part: feature:619845-619988:1:exon
so has part: feature:620232-620435:1:exon
so has part: feature:621321-621463:1:exon
so has part: feature:622050-622254:1:exon
so has part: feature:623588-623913:1:exon

XP_034608555.1
type: Protein
SIO_000068: ncbiprotein

position:614845:1
position: 614845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623913:1
position: 623913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614845-614960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616249-616312:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616976-617044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:618420-618494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619037-619493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:619845-619988:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620232-620435:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:621321-621463:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:622050-622254:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:623588-623913:1:exon

SERPINF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SERPINF2
product: serpin family F member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_034752663.1
SIO_010081: SERPINF2
subclass of: SO_0000673
so part of: SERPINF2
location: join(614847..614960,615635..615673,616249..616312,616976..617044,618420..618494,619037..619493,619845..619988,620232..620435,621321..621463,622050..622254,623588..624510)
location: region:614847-624510:1
so has part: feature:614847-614960:1:exon
so has part: feature:615635-615673:1:exon
so has part: feature:616249-616312:1:exon
so has part: feature:616976-617044:1:exon
so has part: feature:618420-618494:1:exon
so has part: feature:619037-619493:1:exon
so has part: feature:619845-619988:1:exon
so has part: feature:620232-620435:1:exon
so has part: feature:621321-621463:1:exon
so has part: feature:622050-622254:1:exon
so has part: feature:623588-624510:1:exon

position:614847:1
position: 614847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614847-614960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615635-615673:1:exon

position:615635:1
position: 615635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615673:1
position: 615673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616249-616312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616976-617044:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618420-618494:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:619037-619493:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:619845-619988:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:620232-620435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:621321-621463:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:622050-622254:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:623588-624510:1:exon

SERPINF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SERPINF2
product: serpin family F member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_034752665.1
SIO_010081: SERPINF2
subclass of: SO_0000673
so part of: SERPINF2
location: join(614862..614960,615635..615669,616249..616312,616976..617044,618420..618494,619037..619493,619845..619988,620232..620435,621321..621463,622050..622254,623588..624510)
location: region:614862-624510:1
so has part: feature:614862-614960:1:exon
so has part: feature:615635-615669:1:exon
so has part: feature:616249-616312:1:exon
so has part: feature:616976-617044:1:exon
so has part: feature:618420-618494:1:exon
so has part: feature:619037-619493:1:exon
so has part: feature:619845-619988:1:exon
so has part: feature:620232-620435:1:exon
so has part: feature:621321-621463:1:exon
so has part: feature:622050-622254:1:exon
so has part: feature:623588-624510:1:exon

position:614862:1
position: 614862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614862-614960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615635-615669:1:exon

position:615669:1
position: 615669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616249-616312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616976-617044:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618420-618494:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:619037-619493:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:619845-619988:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:620232-620435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:621321-621463:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:622050-622254:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:623588-624510:1:exon

SERPINF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SERPINF2
product: serpin family F member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_034752666.1
SIO_010081: SERPINF2
subclass of: SO_0000673
so part of: SERPINF2
location: join(614920..614960,616235..616312,616976..617044,618420..618494,619037..619493,619845..619988,620232..620435,621321..621463,622050..622254,623588..624510)
location: region:614920-624510:1
so has part: feature:614920-614960:1:exon
so has part: feature:616235-616312:1:exon
so has part: feature:616976-617044:1:exon
so has part: feature:618420-618494:1:exon
so has part: feature:619037-619493:1:exon
so has part: feature:619845-619988:1:exon
so has part: feature:620232-620435:1:exon
so has part: feature:621321-621463:1:exon
so has part: feature:622050-622254:1:exon
so has part: feature:623588-624510:1:exon

position:614920:1
position: 614920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614920-614960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616235-616312:1:exon

position:616235:1
position: 616235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616976-617044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:618420-618494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619037-619493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:619845-619988:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620232-620435:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:621321-621463:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:622050-622254:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:623588-624510:1:exon

SERPINF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SERPINF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-2-antiplasmin isoform X1
translation: MLSKPRQHLLNPCSFLKGRNTAMLLWGLLLCFSTLHDSPGFPLAHALEMKTPPSDHAPQERPEGPAVENATSKENPEWDPSAQPLTSQHSEEAGALEGEPQFVPTTTVLPGVDPTLPNAAVSDSTSDTWEDIHGATLPLPTTSSTTSPGAGLTSSGGHLVTGTVGDHKQVLEVQEVDSSEEEGEGQERGCDMSQEQTRRLAEGLMKFTIDLLTEVQMETSRPNVILSPLSITLALSQLALGAANQTEKRLLEALHLESVPCLHHLLSSIRRQLTGSMLSVASRIYLQKGFEVKEKFLETSERFYGAKPVTLSGNNENDLIAINKWIKEATEGQISTFLDQLPASTVMLLLNAVHFQGFWRHKFDPSQTGPDVFHLDDQFIVPVEMMKAQKYSLSWFTLDPLEVQVARFPFKGNMSFVAIVPNQFKWNVSQVLANLSHDKLHSRFPKEKPTMVKMPKLHVDYQLELNQVLSQLGLRELFSAPDLQKITDEPLFVSSIQHQSTLELAEDGVEASAATSVMMSRSLSTFSLNQPFLFIIFEETTGIPLFVGSIQNPNPSAAQQKKEPQDSPNLKNGIKNSIPK
SIO_010081: SERPINF2
subclass of: SO_0000673
so part of: SERPINF2
location: join(614944..614960,615635..615673,616249..616312,616976..617044,618420..618494,619037..619493,619845..619988,620232..620435,621321..621463,622050..622254,623588..623913)
location: region:614944-623913:1
so has part: feature:614944-614960:1:exon
so has part: feature:615635-615673:1:exon
so has part: feature:616249-616312:1:exon
so has part: feature:616976-617044:1:exon
so has part: feature:618420-618494:1:exon
so has part: feature:619037-619493:1:exon
so has part: feature:619845-619988:1:exon
so has part: feature:620232-620435:1:exon
so has part: feature:621321-621463:1:exon
so has part: feature:622050-622254:1:exon
so has part: feature:623588-623913:1:exon

XP_034608554.1
type: Protein
SIO_000068: ncbiprotein

position:614944:1
position: 614944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614944-614960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615635-615673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616249-616312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616976-617044:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618420-618494:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:619037-619493:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:619845-619988:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:620232-620435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:621321-621463:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:622050-622254:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:623588-623913:1:exon

SERPINF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SERPINF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-2-antiplasmin isoform X3
translation: MLLWGLLLCFSTLHDSPGFPLAHALEMKTPPSDHAPQERPEGPAVENATSKENPEWDPSAQPLTSQHSEEAGALEGEPQFVPTTTVLPGVDPTLPNAAVSDSTSDTWEDIHGATLPLPTTSSTTSPGAGLTSSGGHLVTGTVGDHKQVLEVQEVDSSEEEGEGQERGCDMSQEQTRRLAEGLMKFTIDLLTEVQMETSRPNVILSPLSITLALSQLALGAANQTEKRLLEALHLESVPCLHHLLSSIRRQLTGSMLSVASRIYLQKGFEVKEKFLETSERFYGAKPVTLSGNNENDLIAINKWIKEATEGQISTFLDQLPASTVMLLLNAVHFQGFWRHKFDPSQTGPDVFHLDDQFIVPVEMMKAQKYSLSWFTLDPLEVQVARFPFKGNMSFVAIVPNQFKWNVSQVLANLSHDKLHSRFPKEKPTMVKMPKLHVDYQLELNQVLSQLGLRELFSAPDLQKITDEPLFVSSIQHQSTLELAEDGVEASAATSVMMSRSLSTFSLNQPFLFIIFEETTGIPLFVGSIQNPNPSAAQQKKEPQDSPNLKNGIKNSIPK
SIO_010081: SERPINF2
subclass of: SO_0000673
so part of: SERPINF2
location: join(616259..616312,616976..617044,618420..618494,619037..619493,619845..619988,620232..620435,621321..621463,622050..622254,623588..623913)
location: region:616259-623913:1
so has part: feature:616259-616312:1:exon
so has part: feature:616976-617044:1:exon
so has part: feature:618420-618494:1:exon
so has part: feature:619037-619493:1:exon
so has part: feature:619845-619988:1:exon
so has part: feature:620232-620435:1:exon
so has part: feature:621321-621463:1:exon
so has part: feature:622050-622254:1:exon
so has part: feature:623588-623913:1:exon

XP_034608556.1
type: Protein
SIO_000068: ncbiprotein

position:616259:1
position: 616259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616259-616312:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616976-617044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618420-618494:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619037-619493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619845-619988:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620232-620435:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:621321-621463:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:622050-622254:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:623588-623913:1:exon

SERPINF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SERPINF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-2-antiplasmin isoform X3
translation: MLLWGLLLCFSTLHDSPGFPLAHALEMKTPPSDHAPQERPEGPAVENATSKENPEWDPSAQPLTSQHSEEAGALEGEPQFVPTTTVLPGVDPTLPNAAVSDSTSDTWEDIHGATLPLPTTSSTTSPGAGLTSSGGHLVTGTVGDHKQVLEVQEVDSSEEEGEGQERGCDMSQEQTRRLAEGLMKFTIDLLTEVQMETSRPNVILSPLSITLALSQLALGAANQTEKRLLEALHLESVPCLHHLLSSIRRQLTGSMLSVASRIYLQKGFEVKEKFLETSERFYGAKPVTLSGNNENDLIAINKWIKEATEGQISTFLDQLPASTVMLLLNAVHFQGFWRHKFDPSQTGPDVFHLDDQFIVPVEMMKAQKYSLSWFTLDPLEVQVARFPFKGNMSFVAIVPNQFKWNVSQVLANLSHDKLHSRFPKEKPTMVKMPKLHVDYQLELNQVLSQLGLRELFSAPDLQKITDEPLFVSSIQHQSTLELAEDGVEASAATSVMMSRSLSTFSLNQPFLFIIFEETTGIPLFVGSIQNPNPSAAQQKKEPQDSPNLKNGIKNSIPK
SIO_010081: SERPINF2
subclass of: SO_0000673
so part of: SERPINF2
location: join(616259..616312,616976..617044,618420..618494,619037..619493,619845..619988,620232..620435,621321..621463,622050..622254,623588..623913)
location: region:616259-623913:1
so has part: feature:616259-616312:1:exon
so has part: feature:616976-617044:1:exon
so has part: feature:618420-618494:1:exon
so has part: feature:619037-619493:1:exon
so has part: feature:619845-619988:1:exon
so has part: feature:620232-620435:1:exon
so has part: feature:621321-621463:1:exon
so has part: feature:622050-622254:1:exon
so has part: feature:623588-623913:1:exon

XP_034608557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:616259-616312:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616976-617044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618420-618494:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619037-619493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619845-619988:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620232-620435:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:621321-621463:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:622050-622254:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:623588-623913:1:exon

SERPINF1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SERPINF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 628540..636458
location: region:628540-636458:1
so has part: feature:628540-636458:1:exon
subclass of: SO_0000010

117867352
type: Gene
SIO_000068: ncbigene

position:628540:1
position: 628540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636458:1
position: 636458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628540-636458:1:exon

SERPINF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SERPINF1
product: serpin family F member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_034752265.1
SIO_010081: SERPINF1
subclass of: SO_0000673
so part of: SERPINF1
location: join(628540..628678,631353..631438,631850..632051,632130..632285,633244..633447,634386..634528,635412..635622,636056..636458)
location: region:628540-636458:1
so has part: feature:628540-628678:1:exon
so has part: feature:631353-631438:1:exon
so has part: feature:631850-632051:1:exon
so has part: feature:632130-632285:1:exon
so has part: feature:633244-633447:1:exon
so has part: feature:634386-634528:1:exon
so has part: feature:635412-635622:1:exon
so has part: feature:636056-636458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628540-628678:1:exon

position:628678:1
position: 628678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:631353-631438:1:exon

position:631353:1
position: 631353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631438:1
position: 631438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:631850-632051:1:exon

position:631850:1
position: 631850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632051:1
position: 632051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:632130-632285:1:exon

position:632130:1
position: 632130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632285:1
position: 632285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:633244-633447:1:exon

position:633244:1
position: 633244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633447:1
position: 633447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:634386-634528:1:exon

position:634386:1
position: 634386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634528:1
position: 634528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:635412-635622:1:exon

position:635412:1
position: 635412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635622:1
position: 635622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:636056-636458:1:exon

position:636056:1
position: 636056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SERPINF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SERPINF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pigment epithelium-derived factor
translation: MQTLVVLLWLGLLASPSRSQDSAAEQDSGTPEGGNTEAAEEEDPFYKSPVNKLAASVSNFGYDLYRQQSSKTPTANVLLSPFSVATALSGLLLGAGERTEDLISRTLFYDLLNKAEVHNTYKELLASITAPVKGLRSATRIVVERKLRMKMGFVSQLEKSYGARPKLLTGNTHSDLQDINNWVQQQTKGKIVKFLKEIPTGISIFLIGAVYFKGQWGTKFDPTKTMLQDFHLDEGRSVKVPMMSDPKAILRYGFDSELNCKIAQLPLTAGVSAMFFLPQKVTQNMTLIEESLTSEFVRDIDRELKTIHAVLSIPRLKLSSEAALGSTLQEMRLQSLFTTPDFSKISPKSTKLSHVQHKAVLELNEDGARSTPSPVENAARLTFPLDYHLDRPFLFVLRDDTTGTLLFIGKILDPRST
SIO_010081: SERPINF1
subclass of: SO_0000673
so part of: SERPINF1
location: join(631361..631438,631850..632051,632130..632285,633244..633447,634386..634528,635412..635622,636056..636315)
location: region:631361-636315:1
so has part: feature:631361-631438:1:exon
so has part: feature:631850-632051:1:exon
so has part: feature:632130-632285:1:exon
so has part: feature:633244-633447:1:exon
so has part: feature:634386-634528:1:exon
so has part: feature:635412-635622:1:exon
so has part: feature:636056-636315:1:exon

XP_034608156.1
type: Protein
SIO_000068: ncbiprotein

position:631361:1
position: 631361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636315:1
position: 636315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631361-631438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631850-632051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632130-632285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633244-633447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634386-634528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635412-635622:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636056-636315:1:exon

SMYD4
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SMYD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(636797..>648192)
location: region:636797-648192:-1
so has part: feature:636797-648192:-1:exon
subclass of: SO_0000010

117867351
type: Gene
SIO_000068: ncbigene

position:636797:-1
position: 636797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648192:-1
position: 648192
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636797-648192:-1:exon

SMYD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SMYD4
product: SET and MYND domain containing 4
inference: similar to RNA sequence, mRNA (same species):INSD:JW404031.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 335 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_034752264.1
SIO_010081: SMYD4
subclass of: SO_0000673
so part of: SMYD4
location: complement(join(636797..637206,638372..638495,638875..638991,639505..639637,640612..640781,641259..641441,643603..644773,645838..645918,647724..647868,647944..>648192))
location: region:636797-648192:-1
so has part: feature:647944-648192:-1:exon
so has part: feature:647724-647868:-1:exon
so has part: feature:645838-645918:-1:exon
so has part: feature:643603-644773:-1:exon
so has part: feature:641259-641441:-1:exon
so has part: feature:640612-640781:-1:exon
so has part: feature:639505-639637:-1:exon
so has part: feature:638875-638991:-1:exon
so has part: feature:638372-638495:-1:exon
so has part: feature:636797-637206:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:647944-648192:-1:exon

position:647944:-1
position: 647944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:647724-647868:-1:exon

position:647724:-1
position: 647724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647868:-1
position: 647868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:645838-645918:-1:exon

position:645838:-1
position: 645838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645918:-1
position: 645918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:643603-644773:-1:exon

position:643603:-1
position: 643603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644773:-1
position: 644773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:641259-641441:-1:exon

position:641259:-1
position: 641259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641441:-1
position: 641441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:640612-640781:-1:exon

position:640612:-1
position: 640612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640781:-1
position: 640781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:639505-639637:-1:exon

position:639505:-1
position: 639505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639637:-1
position: 639637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:638875-638991:-1:exon

position:638875:-1
position: 638875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638991:-1
position: 638991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:638372-638495:-1:exon

position:638372:-1
position: 638372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638495:-1
position: 638495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:636797-637206:-1:exon

position:637206:-1
position: 637206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMYD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SMYD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SET and MYND domain-containing protein 4
translation: MELPAGEWAAYARRRWASLDPCLQQKLSLAGPLGDTFLLCLPLFQPADGEFLHSLAARNRVGKDPRAALFYKEEGNKRFQNKEYTAALILYSKAVSHNSPEMSLCYANRSAALFHLGHFEDCLEDIDRAQAQSYPNRLQPKILLRKTECLLLLGRLQEAAEVISKAESKIAMDQSLTSTTRQSLLRKISQLKVNAHEMESSPVSVPEAPSKTRKDLEFWEENGKISSAFSSVSLNFNSCRGRHLVATRDILPGENLVKEEAFVSVLSPGKSLLLQDSAETTWDTRVTNADLHCHRCLKQLLASVPCEGCSYAKYCSKKCAQLAWEHYHSTECPLGALLLTLGVFSHVALRTVLVAGFAEVSSLMKQFHEDDKELHKAEARGRSRDETRDSAAGMEGLSEKAEPLIPGCEDDGQYRGSYQAVFNLLTHAEKHSPEHKFLCSLSIVAICKKLQEVDLTILSQGSRESQSKLKAHAKMSTDLSLELKILGEAMLRHMLQLHCNAQAVTAIRESESGDSIVADSEQVRLATALFPVTSLLNHSCDPNTSVTFSGTAVTVRASQPIPRGQEIVHCYGPHRCRMGAAERRQRLLCQYFFECRCQACLDELESDITGIAATGDIFCCSSCHASMQGEDVLRCSSGACTLLVGRDYLLRQLWDLRLQVRTALGLLKDNQPNQAVELLMRCRVDAENFLSAEHMLVGEIEDHLAQGYATLGKWQEAARHLRRSIQIVEARHGPSSVETGHELFKLAQILFNGFAVSEALCTIQRAETVLCVHCGPQNAQVQELQEMRACLLELPRSLLHRVE
SIO_010081: SMYD4
subclass of: SO_0000673
so part of: SMYD4
location: complement(join(637053..637206,638372..638495,638875..638991,639505..639637,640612..640781,641259..641441,643603..644773,645838..645918,647724..647868,647944..648077))
location: region:637053-648077:-1
so has part: feature:647944-648077:-1:exon
so has part: feature:647724-647868:-1:exon
so has part: feature:645838-645918:-1:exon
so has part: feature:643603-644773:-1:exon
so has part: feature:641259-641441:-1:exon
so has part: feature:640612-640781:-1:exon
so has part: feature:639505-639637:-1:exon
so has part: feature:638875-638991:-1:exon
so has part: feature:638372-638495:-1:exon
so has part: feature:637053-637206:-1:exon

XP_034608155.1
type: Protein
SIO_000068: ncbiprotein

position:637053:-1
position: 637053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648077:-1
position: 648077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647944-648077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:647724-647868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645838-645918:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:643603-644773:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:641259-641441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:640612-640781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639505-639637:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638875-638991:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:638372-638495:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:637053-637206:-1:exon

RPA1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: RPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 648576..687308
location: region:648576-687308:1
so has part: feature:648576-687308:1:exon
subclass of: SO_0000010

117867353
type: Gene
SIO_000068: ncbigene

position:648576:1
position: 648576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687308:1
position: 687308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648576-687308:1:exon

RPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: RPA1
product: replication protein A1
inference: similar to RNA sequence, mRNA (same species):INSD:JW314449.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 415 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034752266.1
SIO_010081: RPA1
subclass of: SO_0000673
so part of: RPA1
location: join(648576..>648694,<665787..665919,666787..666889,668129..668197,668344..668536,669288..669427,670629..670777,679306..679438,680761..680937,682598..682705,685726..685812,686208..687308)
location: region:648576-687308:1
so has part: feature:648576-648694:1:exon
so has part: feature:665787-665919:1:exon
so has part: feature:666787-666889:1:exon
so has part: feature:668129-668197:1:exon
so has part: feature:668344-668536:1:exon
so has part: feature:669288-669427:1:exon
so has part: feature:670629-670777:1:exon
so has part: feature:679306-679438:1:exon
so has part: feature:680761-680937:1:exon
so has part: feature:682598-682705:1:exon
so has part: feature:685726-685812:1:exon
so has part: feature:686208-687308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:648576-648694:1:exon

position:648694:1
position: 648694
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 2
SIO_000628: feature:665787-665919:1:exon

position:665787:1
position: 665787
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:665919:1
position: 665919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:666787-666889:1:exon

position:666787:1
position: 666787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666889:1
position: 666889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:668129-668197:1:exon

position:668129:1
position: 668129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668197:1
position: 668197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:668344-668536:1:exon

position:668344:1
position: 668344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668536:1
position: 668536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:669288-669427:1:exon

position:669288:1
position: 669288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669427:1
position: 669427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:670629-670777:1:exon

position:670629:1
position: 670629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670777:1
position: 670777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:679306-679438:1:exon

position:679306:1
position: 679306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679438:1
position: 679438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:680761-680937:1:exon

position:680761:1
position: 680761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680937:1
position: 680937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:682598-682705:1:exon

position:682598:1
position: 682598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682705:1
position: 682705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:685726-685812:1:exon

position:685726:1
position: 685726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685812:1
position: 685812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:686208-687308:1:exon

position:686208:1
position: 686208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: RPA1
inference: similar to RNA sequence, mRNA (same species):INSD:JW314449.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 415 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: replication protein A 70 kDa DNA-binding subunit
translation: MSARLSEGAIAAIMQGENNLKPVLQVINIRAIATGNGPSRYRVLMSDGVNTLSSFMLATQLNSLIEEERLSAHCICQVNRYIVNSLKDGRRVIILMDLDVLKTADVVGANIGNPVPYNEGQGHQQQRSSVPAASPTHSKPQQQNGNSAVGPTTTKYLGPSKQFGKAGGTSFLSTPGGSQSKVVPIASLNPYQSKWTICARVTQKGQVRTWSNSRGEGKLFSIELVDESGEIRATAFNDQVDKFFPLIELNKVYYFTKGHLKTANKQYTAVKNDYEITFHNETSVVPCEDAQHLPSVQFEFVPISDLENTCKDSIVDIIGVCKSYEDISKITVKSSNREVSKRNVHLMDTSGKMVTATLWGDEAERFDGSRQPVVAIKGARVSDFGGRSLSVLSSSTVVVNPDSPEAFKLRGWFDSEGQLLECTSISDLRGGPTIGGNTNWKTLHEAKSENLGQGDKADYFSCVGTVVFLRKENCMYQACPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADCQENQWVTCFQESAEVILGQNAAFLGELKEKNEQAFEEVFQNANFSSYEFRIRVKLETYNDESRIKATVMDVKPVNHKEYSKRLIMNIRKNAVQLG
SIO_010081: RPA1
subclass of: SO_0000673
so part of: RPA1
location: join(648662..>648694,<665787..665919,666787..666889,668129..668197,668344..668536,669288..669427,670629..670777,679306..679438,680761..680937,682598..682705,685726..685812,686208..686318)
location: region:648662-686318:1
so has part: feature:648662-648694:1:exon
so has part: feature:665787-665919:1:exon
so has part: feature:666787-666889:1:exon
so has part: feature:668129-668197:1:exon
so has part: feature:668344-668536:1:exon
so has part: feature:669288-669427:1:exon
so has part: feature:670629-670777:1:exon
so has part: feature:679306-679438:1:exon
so has part: feature:680761-680937:1:exon
so has part: feature:682598-682705:1:exon
so has part: feature:685726-685812:1:exon
so has part: feature:686208-686318:1:exon

XP_034608157.1
type: Protein
SIO_000068: ncbiprotein

position:648662:1
position: 648662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686318:1
position: 686318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648662-648694:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:665787-665919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:666787-666889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:668129-668197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668344-668536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:669288-669427:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670629-670777:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679306-679438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:680761-680937:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:682598-682705:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:685726-685812:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:686208-686318:1:exon

RTN4RL1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: RTN4RL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(713198..777396)
location: region:713198-777396:-1
so has part: feature:713198-777396:-1:exon
subclass of: SO_0000010

117867697
type: Gene
SIO_000068: ncbigene

position:713198:-1
position: 713198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777396:-1
position: 777396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:713198-777396:-1:exon

RTN4RL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: RTN4RL1
product: reticulon 4 receptor like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_034752917.1
SIO_010081: RTN4RL1
subclass of: SO_0000673
so part of: RTN4RL1
location: complement(join(713198..716252,777128..777396))
location: region:713198-777396:-1
so has part: feature:777128-777396:-1:exon
so has part: feature:713198-716252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:777128-777396:-1:exon

position:777128:-1
position: 777128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:713198-716252:-1:exon

position:716252:-1
position: 716252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RTN4RL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: RTN4RL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-4 receptor-like 1
translation: MLRKGGSVELLLMLLGLEIHFTACCPIDCVCYPSPMTVSCQAHNFASIPEGIPENSERIFLQNNQITLLLRGHFSPSMVTLWIYSNNITFIDPDTFDGFVNLEELDLGDNRYLRALAAETFQGLVKLHALYLYKCGLSSLPSGIFGGLHNLQYLYLQDNHIEFLQDDIFVDLVNLSHLFLHGNKLWSLHQNTFRGLINLDRLLIHQNQLQWVHRRAFHDLRRLTTLFLFNNSLSELQGECLAHLGALEFLRLNGNPWSCDCKSRSLWDWLRRFRGSSSSVICESPEQMHGKDLKVLKAEDYRNCSGSESLHQIKTHTFSTADRGASKDHHPHHSSKEKGKERGVEHSLHSSQPAAPPGSRPGYRKPSKNCTSHKSRNRTSKPVSLGPRKSIHEAQDYVPDYQHKFSFGMMPTAPPKRKGKCTRRTPIRPPSGVQQAAGSSVIRASRLVFIMVLVVIIR
SIO_010081: RTN4RL1
subclass of: SO_0000673
so part of: RTN4RL1
location: complement(join(714889..716252,777128..777140))
location: region:714889-777140:-1
so has part: feature:777128-777140:-1:exon
so has part: feature:714889-716252:-1:exon

XP_034608808.1
type: Protein
SIO_000068: ncbiprotein

position:714889:-1
position: 714889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777140:-1
position: 777140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777128-777140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714889-716252:-1:exon

DPH1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: DPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 789342..842026
location: region:789342-842026:1
so has part: feature:789342-842026:1:exon
subclass of: SO_0000010

117867502
type: Gene
SIO_000068: ncbigene

position:789342:1
position: 789342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842026:1
position: 842026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789342-842026:1:exon

DPH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: DPH1
product: diphthamide biosynthesis 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_034752602.1
SIO_010081: DPH1
subclass of: SO_0000673
so part of: DPH1
location: join(789342..789457,792533..792688,798383..798446,820826..820947,825874..826028,827670..827791,831328..831396,833440..833596,836511..836611,838002..838080,838997..839131,840642..842026)
location: region:789342-842026:1
so has part: feature:789342-789457:1:exon
so has part: feature:792533-792688:1:exon
so has part: feature:798383-798446:1:exon
so has part: feature:820826-820947:1:exon
so has part: feature:825874-826028:1:exon
so has part: feature:827670-827791:1:exon
so has part: feature:831328-831396:1:exon
so has part: feature:833440-833596:1:exon
so has part: feature:836511-836611:1:exon
so has part: feature:838002-838080:1:exon
so has part: feature:838997-839131:1:exon
so has part: feature:840642-842026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789342-789457:1:exon

position:789457:1
position: 789457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:792533-792688:1:exon

position:792533:1
position: 792533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792688:1
position: 792688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:798383-798446:1:exon

position:798383:1
position: 798383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798446:1
position: 798446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:820826-820947:1:exon

position:820826:1
position: 820826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820947:1
position: 820947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:825874-826028:1:exon

position:825874:1
position: 825874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826028:1
position: 826028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:827670-827791:1:exon

position:827670:1
position: 827670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827791:1
position: 827791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:831328-831396:1:exon

position:831328:1
position: 831328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831396:1
position: 831396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:833440-833596:1:exon

position:833440:1
position: 833440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833596:1
position: 833596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:836511-836611:1:exon

position:836511:1
position: 836511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836611:1
position: 836611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:838002-838080:1:exon

position:838002:1
position: 838002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838080:1
position: 838080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:838997-839131:1:exon

position:838997:1
position: 838997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839131:1
position: 839131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:840642-842026:1:exon

position:840642:1
position: 840642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: DPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1
translation: MAAQEQPARSEVPAAAPGRGPQRRRVAMQIPEAILTNKELQEAVGALPSNYNFEIYKTVWRIQQAEAKRVALQMPEGLLMFACTIADIIERFTGAEVVVMGDVTYGACCVDDFTARALGADFMVHYGHSCLVPIDATQGVKMLYVFVDIKIDTSHFVETVHFNFPKGACLALVSTIQFVSALQAASQVLRSEYKVSIPQCKPLSPGEILGCTSPRLGPDTDAVVYLGDGRFHLESVMIANPGVPAYRYDPYSKIFSREHYAHERMQHARQEAIRTAARARSWGLILGTLGRQGSTSILQHLEGRLQALGLPFVRVLLSEIFPSKLQLFPDVDAWVQVACPRLSIDWGGAFSKPLLTPYEAAVALKEIEWQQTYPMDFYAGQSLGPWTVNHASHQPQRGTSRPTQRKLPEPVVPVDAGVGKKCTDCSCQDKAPLQPEHP
SIO_010081: DPH1
subclass of: SO_0000673
so part of: DPH1
location: join(789406..789457,792533..792688,798383..798446,820826..820947,825874..826028,827670..827791,831328..831396,833440..833596,836511..836611,838002..838080,838997..839131,840642..840746)
location: region:789406-840746:1
so has part: feature:789406-789457:1:exon
so has part: feature:792533-792688:1:exon
so has part: feature:798383-798446:1:exon
so has part: feature:820826-820947:1:exon
so has part: feature:825874-826028:1:exon
so has part: feature:827670-827791:1:exon
so has part: feature:831328-831396:1:exon
so has part: feature:833440-833596:1:exon
so has part: feature:836511-836611:1:exon
so has part: feature:838002-838080:1:exon
so has part: feature:838997-839131:1:exon
so has part: feature:840642-840746:1:exon

XP_034608493.1
type: Protein
SIO_000068: ncbiprotein

position:789406:1
position: 789406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840746:1
position: 840746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789406-789457:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792533-792688:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:798383-798446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:820826-820947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:825874-826028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:827670-827791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831328-831396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:833440-833596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:836511-836611:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:838002-838080:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:838997-839131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:840642-840746:1:exon

OVCA2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: OVCA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 842061..843406
location: region:842061-843406:1
so has part: feature:842061-843406:1:exon
subclass of: SO_0000010

117867503
type: Gene
SIO_000068: ncbigene

position:842061:1
position: 842061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843406:1
position: 843406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842061-843406:1:exon

OVCA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: OVCA2
product: OVCA2 serine hydrolase domain containing
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034752603.1
SIO_010081: OVCA2
subclass of: SO_0000673
so part of: OVCA2
location: 842061..843406
location: region:842061-843406:1
so has part: feature:842061-843406:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:842061-843406:1:exon

OVCA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: OVCA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: esterase OVCA2
translation: MAGEKRPLRILGLHGYRQNQRSFHERTGALRKALRGRAELVSVSAPHPVPGPAAERGGGAGRSPEPQAAEPRGWWFSRPREETFDALEEAAACKGLDESLEAVARALAELGPFDGLLGFSQGAALAALLCALQQRGDARFPFQFAILVAGFKSRAAPHSGYYREPIAVPSLHVLGDTDRVIPPGLSRELASHFVDPAVLTHPGGHFVPAAAPQKRAYLEFLARFLK
SIO_010081: OVCA2
subclass of: SO_0000673
so part of: OVCA2
location: 842284..842964
location: region:842284-842964:1
so has part: feature:842284-842964:1:exon

XP_034608494.1
type: Protein
SIO_000068: ncbiprotein

position:842284:1
position: 842284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842964:1
position: 842964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842284-842964:1:exon

HIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: HIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 898131..904974
location: region:898131-904974:1
so has part: feature:898131-904974:1:exon
subclass of: SO_0000010

117867663
type: Gene
SIO_000068: ncbigene

position:898131:1
position: 898131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904974:1
position: 904974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898131-904974:1:exon

HIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: HIC1
product: HIC ZBTB transcriptional repressor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034752874.1
SIO_010081: HIC1
subclass of: SO_0000673
so part of: HIC1
location: join(898131..898234,901084..901258,901499..904974)
location: region:898131-904974:1
so has part: feature:898131-898234:1:exon
so has part: feature:901084-901258:1:exon
so has part: feature:901499-904974:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:898131-898234:1:exon

position:898234:1
position: 898234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:901084-901258:1:exon

position:901084:1
position: 901084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901258:1
position: 901258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:901499-904974:1:exon

position:901499:1
position: 901499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: HIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hypermethylated in cancer 1 protein
translation: MTWQKRKSSPIKSADDPKIGSVTSNEEDKVIRIIWVPGPRTCVGRSRLAPRMSGARDARWQQGPALPPAGARPRGERAPGRRTAAPGLRDEPKLEVPRGGSRKPSHLGLKPFACDACGMRFTRQYRLTEHMRIHSGEKPYECQVCGGKFAQQRNLISHMKMHVAGPDGKAKLDFPESVFAMARLTADQLGLKQEKAAELLSHTSHFLSDPKGLESLYPLARFTAEHLGLSQEKAAEMLGAGPLLHGDRTIERYSPT
SIO_010081: HIC1
subclass of: SO_0000673
so part of: HIC1
location: join(898131..898234,901084..901258,901499..901990)
location: region:898131-901990:1
so has part: feature:898131-898234:1:exon
so has part: feature:901084-901258:1:exon
so has part: feature:901499-901990:1:exon

XP_034608765.1
type: Protein
SIO_000068: ncbiprotein

position:901990:1
position: 901990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898131-898234:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:901084-901258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:901499-901990:1:exon

LOC117867567
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117867567
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 907406..907780
location: region:907406-907780:1
so has part: feature:907406-907780:1:exon
subclass of: SO_0000011

117867567
type: Gene
SIO_000068: ncbigene

position:907406:1
position: 907406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907780:1
position: 907780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907406-907780:1:exon

LOC117867567
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117867567
product: uncharacterized LOC117867567
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004643440.1
SIO_010081: LOC117867567
subclass of: SO_0000673
so part of: LOC117867567
location: join(907406..907514,907553..907614,907664..907780)
location: region:907406-907780:1
so has part: feature:907406-907514:1:exon
so has part: feature:907553-907614:1:exon
so has part: feature:907664-907780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:907406-907514:1:exon

position:907514:1
position: 907514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:907553-907614:1:exon

position:907553:1
position: 907553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907614:1
position: 907614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:907664-907780:1:exon

position:907664:1
position: 907664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMG6
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SMG6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(907587..1054953)
location: region:907587-1054953:-1
so has part: feature:907587-1054953:-1:exon
subclass of: SO_0000010

117867566
type: Gene
SIO_000068: ncbigene

position:907587:-1
position: 907587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054953:-1
position: 1054953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907587-1054953:-1:exon

SMG6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SMG6
product: SMG6 nonsense mediated mRNA decay factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_034752733.1
SIO_010081: SMG6
subclass of: SO_0000673
so part of: SMG6
location: complement(join(907587..908692,910897..910978,911262..911473,915199..915352,922441..922590,926499..926675,968233..968434,978478..978643,979286..979402,1010071..1010216,1017874..1017935,1038726..1038938,1040537..1040647,1042255..1042333,1043783..1043889,1045035..1045145,1046550..1046742,1049535..1051302,1054883..1054953))
location: region:907587-1054953:-1
so has part: feature:1054883-1054953:-1:exon
so has part: feature:1049535-1051302:-1:exon
so has part: feature:1046550-1046742:-1:exon
so has part: feature:1045035-1045145:-1:exon
so has part: feature:1043783-1043889:-1:exon
so has part: feature:1042255-1042333:-1:exon
so has part: feature:1040537-1040647:-1:exon
so has part: feature:1038726-1038938:-1:exon
so has part: feature:1017874-1017935:-1:exon
so has part: feature:1010071-1010216:-1:exon
so has part: feature:979286-979402:-1:exon
so has part: feature:978478-978643:-1:exon
so has part: feature:968233-968434:-1:exon
so has part: feature:926499-926675:-1:exon
so has part: feature:922441-922590:-1:exon
so has part: feature:915199-915352:-1:exon
so has part: feature:911262-911473:-1:exon
so has part: feature:910897-910978:-1:exon
so has part: feature:907587-908692:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1054883-1054953:-1:exon

position:1054883:-1
position: 1054883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1049535-1051302:-1:exon

position:1049535:-1
position: 1049535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051302:-1
position: 1051302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1046550-1046742:-1:exon

position:1046550:-1
position: 1046550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046742:-1
position: 1046742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1045035-1045145:-1:exon

position:1045035:-1
position: 1045035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045145:-1
position: 1045145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1043783-1043889:-1:exon

position:1043783:-1
position: 1043783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043889:-1
position: 1043889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1042255-1042333:-1:exon

position:1042255:-1
position: 1042255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042333:-1
position: 1042333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1040537-1040647:-1:exon

position:1040537:-1
position: 1040537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1040647:-1
position: 1040647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1038726-1038938:-1:exon

position:1038726:-1
position: 1038726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038938:-1
position: 1038938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1017874-1017935:-1:exon

position:1017874:-1
position: 1017874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017935:-1
position: 1017935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1010071-1010216:-1:exon

position:1010071:-1
position: 1010071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010216:-1
position: 1010216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:979286-979402:-1:exon

position:979286:-1
position: 979286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979402:-1
position: 979402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:978478-978643:-1:exon

position:978478:-1
position: 978478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978643:-1
position: 978643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:968233-968434:-1:exon

position:968233:-1
position: 968233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968434:-1
position: 968434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:926499-926675:-1:exon

position:926499:-1
position: 926499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926675:-1
position: 926675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:922441-922590:-1:exon

position:922441:-1
position: 922441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922590:-1
position: 922590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:915199-915352:-1:exon

position:915199:-1
position: 915199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915352:-1
position: 915352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:911262-911473:-1:exon

position:911262:-1
position: 911262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911473:-1
position: 911473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:910897-910978:-1:exon

position:910897:-1
position: 910897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910978:-1
position: 910978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:907587-908692:-1:exon

position:908692:-1
position: 908692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMG6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SMG6
product: SMG6 nonsense mediated mRNA decay factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034752732.1
SIO_010081: SMG6
subclass of: SO_0000673
so part of: SMG6
location: complement(join(907587..908692,910897..910978,911262..911473,915199..915352,922441..922587,926499..926675,968233..968434,978478..978643,979286..979402,1010071..1010216,1017874..1017935,1038726..1038938,1040537..1040647,1042255..1042333,1043783..1043889,1045035..1045145,1046550..1046742,1049535..1051302,1054810..1054923))
location: region:907587-1054923:-1
so has part: feature:1054810-1054923:-1:exon
so has part: feature:1049535-1051302:-1:exon
so has part: feature:1046550-1046742:-1:exon
so has part: feature:1045035-1045145:-1:exon
so has part: feature:1043783-1043889:-1:exon
so has part: feature:1042255-1042333:-1:exon
so has part: feature:1040537-1040647:-1:exon
so has part: feature:1038726-1038938:-1:exon
so has part: feature:1017874-1017935:-1:exon
so has part: feature:1010071-1010216:-1:exon
so has part: feature:979286-979402:-1:exon
so has part: feature:978478-978643:-1:exon
so has part: feature:968233-968434:-1:exon
so has part: feature:926499-926675:-1:exon
so has part: feature:922441-922587:-1:exon
so has part: feature:915199-915352:-1:exon
so has part: feature:911262-911473:-1:exon
so has part: feature:910897-910978:-1:exon
so has part: feature:907587-908692:-1:exon

position:1054923:-1
position: 1054923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054810-1054923:-1:exon

position:1054810:-1
position: 1054810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1049535-1051302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046550-1046742:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045035-1045145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043783-1043889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042255-1042333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1040537-1040647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1038726-1038938:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1017874-1017935:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1010071-1010216:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:979286-979402:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:978478-978643:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:968233-968434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:926499-926675:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922441-922587:-1:exon

position:922587:-1
position: 922587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:915199-915352:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:911262-911473:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:910897-910978:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:907587-908692:-1:exon

SMG6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SMG6
product: SMG6 nonsense mediated mRNA decay factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034752731.1
SIO_010081: SMG6
subclass of: SO_0000673
so part of: SMG6
location: complement(join(907587..908692,910897..910978,911262..911473,915199..915352,922441..922590,926499..926675,968233..968434,978478..978643,979286..979402,1010071..1010216,1017874..1017935,1038726..1038938,1040537..1040647,1042255..1042333,1043783..1043889,1045035..1045145,1046550..1046742,1049535..1051302,1054810..1054903))
location: region:907587-1054903:-1
so has part: feature:1054810-1054903:-1:exon
so has part: feature:1049535-1051302:-1:exon
so has part: feature:1046550-1046742:-1:exon
so has part: feature:1045035-1045145:-1:exon
so has part: feature:1043783-1043889:-1:exon
so has part: feature:1042255-1042333:-1:exon
so has part: feature:1040537-1040647:-1:exon
so has part: feature:1038726-1038938:-1:exon
so has part: feature:1017874-1017935:-1:exon
so has part: feature:1010071-1010216:-1:exon
so has part: feature:979286-979402:-1:exon
so has part: feature:978478-978643:-1:exon
so has part: feature:968233-968434:-1:exon
so has part: feature:926499-926675:-1:exon
so has part: feature:922441-922590:-1:exon
so has part: feature:915199-915352:-1:exon
so has part: feature:911262-911473:-1:exon
so has part: feature:910897-910978:-1:exon
so has part: feature:907587-908692:-1:exon

position:1054903:-1
position: 1054903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054810-1054903:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049535-1051302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046550-1046742:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045035-1045145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043783-1043889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042255-1042333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1040537-1040647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1038726-1038938:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1017874-1017935:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1010071-1010216:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:979286-979402:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:978478-978643:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:968233-968434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:926499-926675:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922441-922590:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:915199-915352:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:911262-911473:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:910897-910978:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:907587-908692:-1:exon

SMG6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SMG6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase-binding protein EST1A isoform X2
translation: MAAELERVRISAAELRGSLAALGRAPGGGGRESMKELKEPRHRKDNRRPDLEIYKPGLSRLRNKHTLLKQEASVYEGTRSEESKDETASDKDPAGAGGGSQVTGDLSKGDSQKQNGPSQGNGEMESKAVFQSQENLDKHSVSDDWCPRIIRRTKKPDQQIYQPGKRLQTIAKEAASQPANDEIASKMEQLRVEGDEETERDIGKGSNSSRTKLNREEREGSLTSEGVKTTRGEKGRQVERADRVRKSGDDLIQGKLGSTKRYSRSDKRRSRYRTCSTSSAGSNNSTDGAPLADGGKKRQERAKERSRPKKQLSASSTDSLEDDKIGETEAFGASRNSERKHPEQSRAKSESEWSSNGKEVKGAPRVTFDNRSVNRDIPVAHTDKKKPPKAFNVSDSIEAVEVKGREPQGRGRGILILPANTDLSASAAGSPESTQPGPRLLLGSGGSKGPRGRGRGGTMRRLWDPNNPDQKPALKSQTSQLHFLDTDDEVSPTSWGDARQSQASYYKFQNSDNPYYYPSPKGQSPQYPYGGYSLPYQMGPNNSVYPGAYYPGYPGQSGQYICSPLPSAPLSPEMEQQMRNIQQQELSKLLREAGNQEQQLSNLLSRDRISPEGLEKMAQLRAEMLQLYERCILMDIEFSDNQNVDQLLWKNAFYQVIEKFRQLLKDPLGENGQEIRNKLLQLLDEGTIFFDNLLQKLQVSYQFKLEDYMDGMAIRSKPLRKMVKYALISAQRCMICQGDICRYREQANDTANYGKARSWYLKAQHIAPKNGRPYNQLALLAIYTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQMEQKQHQVLELSPSRWGKGKKSTFRQVGDDATRLEIWIHPSHPRCSHGHESGRESEQDNGLGNLSPSDLNKRFILSFLHAHGKLFTRIGMETFPSVTEEVLREFQVLLKHSPPPIGSTRMLQLMAINMFAVYNSQPKECLSEDCRSVLQEQATALGLCMFALLVRRCTSLLKESVRAWPQEAEQDEEDDIKVSALPQDLKELLPSVKVWSDWMLGHSDTWNPPPTSLELPKQVSVDVWATLADFCNILTTVNQSEVPLYKDPDDDLSLLSLEEDRLLSGFVPLLVAPQEPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVAPVPDAMGKEMGSQEGKQLEDQEDDLRIEAFEDDSEAEVSGEEFDIRELRARKQALARKVAEQQRRRDKIQAVLKDQSQMRQMELEIRPVFLVPDTNGFIDHLTSLKKLLEWRKFILVVPLIVINELDGLAKGPELEHRAGGHARLLQEKARRSIEFLEERFENRDNCMRALTSRGNELESISFRSEDTTGQQGNNDDLILSCCLHYCNDKAKDFMPTNKDDPIRLLREVVLLTDDRNLRVKALTRNVPVRDIPTFLKWAQEG
SIO_010081: SMG6
subclass of: SO_0000673
so part of: SMG6
location: complement(join(908562..908692,910897..910978,911262..911473,915199..915352,922441..922587,926499..926675,968233..968434,978478..978643,979286..979402,1010071..1010216,1017874..1017935,1038726..1038938,1040537..1040647,1042255..1042333,1043783..1043889,1045035..1045145,1046550..1046742,1049535..1051302,1054810..1054903))
location: region:908562-1054903:-1
so has part: feature:1054810-1054903:-1:exon
so has part: feature:1049535-1051302:-1:exon
so has part: feature:1046550-1046742:-1:exon
so has part: feature:1045035-1045145:-1:exon
so has part: feature:1043783-1043889:-1:exon
so has part: feature:1042255-1042333:-1:exon
so has part: feature:1040537-1040647:-1:exon
so has part: feature:1038726-1038938:-1:exon
so has part: feature:1017874-1017935:-1:exon
so has part: feature:1010071-1010216:-1:exon
so has part: feature:979286-979402:-1:exon
so has part: feature:978478-978643:-1:exon
so has part: feature:968233-968434:-1:exon
so has part: feature:926499-926675:-1:exon
so has part: feature:922441-922587:-1:exon
so has part: feature:915199-915352:-1:exon
so has part: feature:911262-911473:-1:exon
so has part: feature:910897-910978:-1:exon
so has part: feature:908562-908692:-1:exon

XP_034608623.1
type: Protein
SIO_000068: ncbiprotein

position:908562:-1
position: 908562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054810-1054903:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049535-1051302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046550-1046742:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045035-1045145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043783-1043889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042255-1042333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1040537-1040647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1038726-1038938:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1017874-1017935:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1010071-1010216:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:979286-979402:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:978478-978643:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:968233-968434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:926499-926675:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922441-922587:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:915199-915352:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:911262-911473:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:910897-910978:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:908562-908692:-1:exon

SMG6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SMG6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase-binding protein EST1A isoform X1
translation: MAAELERVRISAAELRGSLAALGRAPGGGGRESMKELKEPRHRKDNRRPDLEIYKPGLSRLRNKHTLLKQEASVYEGTRSEESKDETASDKDPAGAGGGSQVTGDLSKGDSQKQNGPSQGNGEMESKAVFQSQENLDKHSVSDDWCPRIIRRTKKPDQQIYQPGKRLQTIAKEAASQPANDEIASKMEQLRVEGDEETERDIGKGSNSSRTKLNREEREGSLTSEGVKTTRGEKGRQVERADRVRKSGDDLIQGKLGSTKRYSRSDKRRSRYRTCSTSSAGSNNSTDGAPLADGGKKRQERAKERSRPKKQLSASSTDSLEDDKIGETEAFGASRNSERKHPEQSRAKSESEWSSNGKEVKGAPRVTFDNRSVNRDIPVAHTDKKKPPKAFNVSDSIEAVEVKGREPQGRGRGILILPANTDLSASAAGSPESTQPGPRLLLGSGGSKGPRGRGRGGTMRRLWDPNNPDQKPALKSQTSQLHFLDTDDEVSPTSWGDARQSQASYYKFQNSDNPYYYPSPKGQSPQYPYGGYSLPYQMGPNNSVYPGAYYPGYPGQSGQYICSPLPSAPLSPEMEQQMRNIQQQELSKLLREAGNQEQQLSNLLSRDRISPEGLEKMAQLRAEMLQLYERCILMDIEFSDNQNVDQLLWKNAFYQVIEKFRQLLKDPLGENGQEIRNKLLQLLDEGTIFFDNLLQKLQVSYQFKLEDYMDGMAIRSKPLRKMVKYALISAQRCMICQGDICRYREQANDTANYGKARSWYLKAQHIAPKNGRPYNQLALLAIYTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQMEQKQHQVLELSPSRWGKGKKSTFRQVGDDATRLEIWIHPSHPRCSHGHESGRESEQDNGLGNLSPSDLNKRFILSFLHAHGKLFTRIGMETFPSVTEEVLREFQVLLKHSPPPIGSTRMLQLMAINMFAVYNSQPKECLSEDCRSVLQEQATALGLCMFALLVRRCTSLLKESVRAWPQEAEQDEEDDIKVSALPQDLKELLPSVKVWSDWMLGHSDTWNPPPTSLELPKQVSVDVWATLADFCNILTTVNQSEVPLYKDPDDDLSLLSLEEDRLLSGFVPLLVAPQEPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVAPVPDAMGKEMGSQEGKQLEDQKEDDLRIEAFEDDSEAEVSGEEFDIRELRARKQALARKVAEQQRRRDKIQAVLKDQSQMRQMELEIRPVFLVPDTNGFIDHLTSLKKLLEWRKFILVVPLIVINELDGLAKGPELEHRAGGHARLLQEKARRSIEFLEERFENRDNCMRALTSRGNELESISFRSEDTTGQQGNNDDLILSCCLHYCNDKAKDFMPTNKDDPIRLLREVVLLTDDRNLRVKALTRNVPVRDIPTFLKWAQEG
SIO_010081: SMG6
subclass of: SO_0000673
so part of: SMG6
location: complement(join(908562..908692,910897..910978,911262..911473,915199..915352,922441..922590,926499..926675,968233..968434,978478..978643,979286..979402,1010071..1010216,1017874..1017935,1038726..1038938,1040537..1040647,1042255..1042333,1043783..1043889,1045035..1045145,1046550..1046742,1049535..1051302,1054810..1054903))
location: region:908562-1054903:-1
so has part: feature:1054810-1054903:-1:exon
so has part: feature:1049535-1051302:-1:exon
so has part: feature:1046550-1046742:-1:exon
so has part: feature:1045035-1045145:-1:exon
so has part: feature:1043783-1043889:-1:exon
so has part: feature:1042255-1042333:-1:exon
so has part: feature:1040537-1040647:-1:exon
so has part: feature:1038726-1038938:-1:exon
so has part: feature:1017874-1017935:-1:exon
so has part: feature:1010071-1010216:-1:exon
so has part: feature:979286-979402:-1:exon
so has part: feature:978478-978643:-1:exon
so has part: feature:968233-968434:-1:exon
so has part: feature:926499-926675:-1:exon
so has part: feature:922441-922590:-1:exon
so has part: feature:915199-915352:-1:exon
so has part: feature:911262-911473:-1:exon
so has part: feature:910897-910978:-1:exon
so has part: feature:908562-908692:-1:exon

XP_034608622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1054810-1054903:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1049535-1051302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046550-1046742:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045035-1045145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1043783-1043889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042255-1042333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1040537-1040647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1038726-1038938:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1017874-1017935:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1010071-1010216:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:979286-979402:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:978478-978643:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:968233-968434:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:926499-926675:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:922441-922590:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:915199-915352:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:911262-911473:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:910897-910978:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:908562-908692:-1:exon

SMG6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SMG6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase-binding protein EST1A isoform X3
translation: MKELKEPRHRKDNRRPDLEIYKPGLSRLRNKHTLLKQEASVYEGTRSEESKDETASDKDPAGAGGGSQVTGDLSKGDSQKQNGPSQGNGEMESKAVFQSQENLDKHSVSDDWCPRIIRRTKKPDQQIYQPGKRLQTIAKEAASQPANDEIASKMEQLRVEGDEETERDIGKGSNSSRTKLNREEREGSLTSEGVKTTRGEKGRQVERADRVRKSGDDLIQGKLGSTKRYSRSDKRRSRYRTCSTSSAGSNNSTDGAPLADGGKKRQERAKERSRPKKQLSASSTDSLEDDKIGETEAFGASRNSERKHPEQSRAKSESEWSSNGKEVKGAPRVTFDNRSVNRDIPVAHTDKKKPPKAFNVSDSIEAVEVKGREPQGRGRGILILPANTDLSASAAGSPESTQPGPRLLLGSGGSKGPRGRGRGGTMRRLWDPNNPDQKPALKSQTSQLHFLDTDDEVSPTSWGDARQSQASYYKFQNSDNPYYYPSPKGQSPQYPYGGYSLPYQMGPNNSVYPGAYYPGYPGQSGQYICSPLPSAPLSPEMEQQMRNIQQQELSKLLREAGNQEQQLSNLLSRDRISPEGLEKMAQLRAEMLQLYERCILMDIEFSDNQNVDQLLWKNAFYQVIEKFRQLLKDPLGENGQEIRNKLLQLLDEGTIFFDNLLQKLQVSYQFKLEDYMDGMAIRSKPLRKMVKYALISAQRCMICQGDICRYREQANDTANYGKARSWYLKAQHIAPKNGRPYNQLALLAIYTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQMEQKQHQVLELSPSRWGKGKKSTFRQVGDDATRLEIWIHPSHPRCSHGHESGRESEQDNGLGNLSPSDLNKRFILSFLHAHGKLFTRIGMETFPSVTEEVLREFQVLLKHSPPPIGSTRMLQLMAINMFAVYNSQPKECLSEDCRSVLQEQATALGLCMFALLVRRCTSLLKESVRAWPQEAEQDEEDDIKVSALPQDLKELLPSVKVWSDWMLGHSDTWNPPPTSLELPKQVSVDVWATLADFCNILTTVNQSEVPLYKDPDDDLSLLSLEEDRLLSGFVPLLVAPQEPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVAPVPDAMGKEMGSQEGKQLEDQKEDDLRIEAFEDDSEAEVSGEEFDIRELRARKQALARKVAEQQRRRDKIQAVLKDQSQMRQMELEIRPVFLVPDTNGFIDHLTSLKKLLEWRKFILVVPLIVINELDGLAKGPELEHRAGGHARLLQEKARRSIEFLEERFENRDNCMRALTSRGNELESISFRSEDTTGQQGNNDDLILSCCLHYCNDKAKDFMPTNKDDPIRLLREVVLLTDDRNLRVKALTRNVPVRDIPTFLKWAQEG
SIO_010081: SMG6
subclass of: SO_0000673
so part of: SMG6
location: complement(join(908562..908692,910897..910978,911262..911473,915199..915352,922441..922590,926499..926675,968233..968434,978478..978643,979286..979402,1010071..1010216,1017874..1017935,1038726..1038938,1040537..1040647,1042255..1042333,1043783..1043889,1045035..1045145,1046550..1046742,1049535..1051297))
location: region:908562-1051297:-1
so has part: feature:1049535-1051297:-1:exon
so has part: feature:1046550-1046742:-1:exon
so has part: feature:1045035-1045145:-1:exon
so has part: feature:1043783-1043889:-1:exon
so has part: feature:1042255-1042333:-1:exon
so has part: feature:1040537-1040647:-1:exon
so has part: feature:1038726-1038938:-1:exon
so has part: feature:1017874-1017935:-1:exon
so has part: feature:1010071-1010216:-1:exon
so has part: feature:979286-979402:-1:exon
so has part: feature:978478-978643:-1:exon
so has part: feature:968233-968434:-1:exon
so has part: feature:926499-926675:-1:exon
so has part: feature:922441-922590:-1:exon
so has part: feature:915199-915352:-1:exon
so has part: feature:911262-911473:-1:exon
so has part: feature:910897-910978:-1:exon
so has part: feature:908562-908692:-1:exon

XP_034608624.1
type: Protein
SIO_000068: ncbiprotein

position:1051297:-1
position: 1051297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1049535-1051297:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1046550-1046742:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045035-1045145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1043783-1043889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042255-1042333:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1040537-1040647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1038726-1038938:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1017874-1017935:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1010071-1010216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:979286-979402:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:978478-978643:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:968233-968434:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:926499-926675:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:922441-922590:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:915199-915352:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:911262-911473:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:910897-910978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:908562-908692:-1:exon

SRR
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SRR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1055061..1060272
location: region:1055061-1060272:1
so has part: feature:1055061-1060272:1:exon
subclass of: SO_0000010

117867724
type: Gene
SIO_000068: ncbigene

position:1055061:1
position: 1055061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060272:1
position: 1060272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055061-1060272:1:exon

SRR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SRR
product: serine racemase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_034752959.1
SIO_010081: SRR
subclass of: SO_0000673
so part of: SRR
location: join(1055061..1055179,1056410..1056587,1057260..1057392,1058031..1058134,1058229..1058348,1058538..1058612,1059281..1059490,1059898..1060272)
location: region:1055061-1060272:1
so has part: feature:1055061-1055179:1:exon
so has part: feature:1056410-1056587:1:exon
so has part: feature:1057260-1057392:1:exon
so has part: feature:1058031-1058134:1:exon
so has part: feature:1058229-1058348:1:exon
so has part: feature:1058538-1058612:1:exon
so has part: feature:1059281-1059490:1:exon
so has part: feature:1059898-1060272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1055061-1055179:1:exon

position:1055179:1
position: 1055179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1056410-1056587:1:exon

position:1056410:1
position: 1056410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056587:1
position: 1056587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1057260-1057392:1:exon

position:1057260:1
position: 1057260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057392:1
position: 1057392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1058031-1058134:1:exon

position:1058031:1
position: 1058031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058134:1
position: 1058134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1058229-1058348:1:exon

position:1058229:1
position: 1058229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058348:1
position: 1058348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1058538-1058612:1:exon

position:1058538:1
position: 1058538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058612:1
position: 1058612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1059281-1059490:1:exon

position:1059281:1
position: 1059281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059490:1
position: 1059490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1059898-1060272:1:exon

position:1059898:1
position: 1059898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SRR
product: serine racemase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034752958.1
SIO_010081: SRR
subclass of: SO_0000673
so part of: SRR
location: join(1055325..1055557,1056410..1056587,1057260..1057392,1058031..1058134,1058229..1058348,1058538..1058612,1059281..1059490,1059898..1060272)
location: region:1055325-1060272:1
so has part: feature:1055325-1055557:1:exon
so has part: feature:1056410-1056587:1:exon
so has part: feature:1057260-1057392:1:exon
so has part: feature:1058031-1058134:1:exon
so has part: feature:1058229-1058348:1:exon
so has part: feature:1058538-1058612:1:exon
so has part: feature:1059281-1059490:1:exon
so has part: feature:1059898-1060272:1:exon

position:1055325:1
position: 1055325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055325-1055557:1:exon

position:1055557:1
position: 1055557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1056410-1056587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1057260-1057392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058031-1058134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1058229-1058348:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1058538-1058612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1059281-1059490:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1059898-1060272:1:exon

SRR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SRR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine racemase isoform X1
translation: MKTQAEEQHYSAHWCLAVQGSLLGDTRWVSLQNMSSPYCISLADVEAAQSRLHGLIHVTPILTSSSLDELAGHRLFFKCELFQKTGSFKVRGALNAVRSLVRAAQGDREQPKAVVTHSSGNHGQALAFAAKVEGIPAYVVVPRTAPVCKTAAICSYGARLILCEPTDESRVEVAARTVQEKEGVMVHPNQDPAVIAGQGTIALEVLQQVPQVNALVVPVGGGGMVAGIAVAVKALRPDIRVYAAEPCNADDCYRSKLTGELTPNRHPPDTIADSVKTSIGPNTWPIIKDLVDDVLTVTEAEIQQATQLVWERMKLLIEPTAGVGVAAVLSEQFCSVSQEVKNVCIVLCGGNVDLGTLAWISPPGKEANGN
SIO_010081: SRR
subclass of: SO_0000673
so part of: SRR
location: join(1055469..1055557,1056410..1056587,1057260..1057392,1058031..1058134,1058229..1058348,1058538..1058612,1059281..1059490,1059898..1060101)
location: region:1055469-1060101:1
so has part: feature:1055469-1055557:1:exon
so has part: feature:1056410-1056587:1:exon
so has part: feature:1057260-1057392:1:exon
so has part: feature:1058031-1058134:1:exon
so has part: feature:1058229-1058348:1:exon
so has part: feature:1058538-1058612:1:exon
so has part: feature:1059281-1059490:1:exon
so has part: feature:1059898-1060101:1:exon

XP_034608849.1
type: Protein
SIO_000068: ncbiprotein

position:1055469:1
position: 1055469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060101:1
position: 1060101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055469-1055557:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1056410-1056587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1057260-1057392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058031-1058134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1058229-1058348:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1058538-1058612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1059281-1059490:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1059898-1060101:1:exon

SRR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SRR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine racemase isoform X2
translation: MSSPYCISLADVEAAQSRLHGLIHVTPILTSSSLDELAGHRLFFKCELFQKTGSFKVRGALNAVRSLVRAAQGDREQPKAVVTHSSGNHGQALAFAAKVEGIPAYVVVPRTAPVCKTAAICSYGARLILCEPTDESRVEVAARTVQEKEGVMVHPNQDPAVIAGQGTIALEVLQQVPQVNALVVPVGGGGMVAGIAVAVKALRPDIRVYAAEPCNADDCYRSKLTGELTPNRHPPDTIADSVKTSIGPNTWPIIKDLVDDVLTVTEAEIQQATQLVWERMKLLIEPTAGVGVAAVLSEQFCSVSQEVKNVCIVLCGGNVDLGTLAWISPPGKEANGN
SIO_010081: SRR
subclass of: SO_0000673
so part of: SRR
location: join(1056420..1056587,1057260..1057392,1058031..1058134,1058229..1058348,1058538..1058612,1059281..1059490,1059898..1060101)
location: region:1056420-1060101:1
so has part: feature:1056420-1056587:1:exon
so has part: feature:1057260-1057392:1:exon
so has part: feature:1058031-1058134:1:exon
so has part: feature:1058229-1058348:1:exon
so has part: feature:1058538-1058612:1:exon
so has part: feature:1059281-1059490:1:exon
so has part: feature:1059898-1060101:1:exon

XP_034608850.1
type: Protein
SIO_000068: ncbiprotein

position:1056420:1
position: 1056420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1056420-1056587:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057260-1057392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1058031-1058134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058229-1058348:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1058538-1058612:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1059281-1059490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1059898-1060101:1:exon

TSR1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: TSR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1061629..1071496)
location: region:1061629-1071496:-1
so has part: feature:1061629-1071496:-1:exon
subclass of: SO_0000010

117867463
type: Gene
SIO_000068: ncbigene

position:1061629:-1
position: 1061629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071496:-1
position: 1071496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061629-1071496:-1:exon

TSR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TSR1
product: TSR1 ribosome maturation factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_034752519.1
SIO_010081: TSR1
subclass of: SO_0000673
so part of: TSR1
location: complement(join(1061629..1062620,1062785..1062859,1063309..1063449,1063728..1063844,1064423..1064555,1065065..1065175,1065476..1065638,1066099..1066301,1066646..1066797,1067370..1067529,1068306..1068736,1070441..1070575,1070830..1071043,1071177..1071277,1071357..1071496))
location: region:1061629-1071496:-1
so has part: feature:1071357-1071496:-1:exon
so has part: feature:1071177-1071277:-1:exon
so has part: feature:1070830-1071043:-1:exon
so has part: feature:1070441-1070575:-1:exon
so has part: feature:1068306-1068736:-1:exon
so has part: feature:1067370-1067529:-1:exon
so has part: feature:1066646-1066797:-1:exon
so has part: feature:1066099-1066301:-1:exon
so has part: feature:1065476-1065638:-1:exon
so has part: feature:1065065-1065175:-1:exon
so has part: feature:1064423-1064555:-1:exon
so has part: feature:1063728-1063844:-1:exon
so has part: feature:1063309-1063449:-1:exon
so has part: feature:1062785-1062859:-1:exon
so has part: feature:1061629-1062620:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1071357-1071496:-1:exon

position:1071357:-1
position: 1071357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1071177-1071277:-1:exon

position:1071177:-1
position: 1071177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071277:-1
position: 1071277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1070830-1071043:-1:exon

position:1070830:-1
position: 1070830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071043:-1
position: 1071043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1070441-1070575:-1:exon

position:1070441:-1
position: 1070441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070575:-1
position: 1070575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1068306-1068736:-1:exon

position:1068306:-1
position: 1068306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068736:-1
position: 1068736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1067370-1067529:-1:exon

position:1067370:-1
position: 1067370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067529:-1
position: 1067529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1066646-1066797:-1:exon

position:1066646:-1
position: 1066646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066797:-1
position: 1066797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1066099-1066301:-1:exon

position:1066099:-1
position: 1066099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066301:-1
position: 1066301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1065476-1065638:-1:exon

position:1065476:-1
position: 1065476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065638:-1
position: 1065638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1065065-1065175:-1:exon

position:1065065:-1
position: 1065065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065175:-1
position: 1065175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1064423-1064555:-1:exon

position:1064423:-1
position: 1064423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064555:-1
position: 1064555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1063728-1063844:-1:exon

position:1063728:-1
position: 1063728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1063844:-1
position: 1063844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1063309-1063449:-1:exon

position:1063309:-1
position: 1063309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1063449:-1
position: 1063449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1062785-1062859:-1:exon

position:1062785:-1
position: 1062785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062859:-1
position: 1062859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1061629-1062620:-1:exon

position:1062620:-1
position: 1062620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TSR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-rRNA-processing protein TSR1 homolog
translation: MAAGAGAAHRAGALKQQNKPHKGRKQRGGAQRRAGGRVPAKTLSRRRRDLTKPDRRHQALQLRRQRKEAVLAEKRHLGSKDGPPHLVVVVPLHAGVVTHDALRLLQSDESALVHTDERAEGFVLLCPRLKLRWRFATAPVGNLHAVLDLAKVADTLLFVLDPLDGWDSAGDYCLSCLFAQGLPSYALAVHGVTDLPQKKQTDAKKKLGKAIEKRLPEAKLFPLNTEQESLLLLRHLAAQKQRHLAFRDRRAYLLAQEAEFMPSHDSDLVGTLKVSGFVRGRTLNVNSLVHIVGHGDFQMSQVDAPPDPFSLNPRVAKGQQRKGQDMEIQDDSVNGAVEMEEVIKVLMKADPRRQESLQSEVIPDPMEGEQTWPTEEELKEADESLKERRKVVKVPKGTSNYQAAWIVEDGDDGSEEEEEDNLEDEDLMEEASQAGESSEEEELEEEECETMTVAESARDDLYDETLDEDEEQMLEKYKQERLDQMFPDEVDTPRNLPARVRFQKYRGLKSFRTSPWDPKENLPRDYARIFQFQDFSRTRKHVFRQIEKEETEGAAVGWYVTLHICSVPSSVMESFRQGLPLVLFSLLPHEQKMSVLNFAVRRHLGNNETVKAKEELIFHCGFRRFRASPLYSQHSSADKHKLERFLRPDAALVVTVYAPITFPPASVLLFKQRSNGMHDLIATGFLLSVDPDRIIIKRLVLSGHPFKIFSKTAVVRYMFFNREDVLWFKPVELRTKWGRRGHITEPLGTHGHMKCHFDGQLKSQDTVLLNLYKRIFPKWTYDPHVPEPVPWVRNEEQLPMQEVEME
SIO_010081: TSR1
subclass of: SO_0000673
so part of: TSR1
location: complement(join(1062442..1062620,1062785..1062859,1063309..1063449,1063728..1063844,1064423..1064555,1065065..1065175,1065476..1065638,1066099..1066301,1066646..1066797,1067370..1067529,1068306..1068736,1070441..1070575,1070830..1071043,1071177..1071277,1071357..1071462))
location: region:1062442-1071462:-1
so has part: feature:1071357-1071462:-1:exon
so has part: feature:1071177-1071277:-1:exon
so has part: feature:1070830-1071043:-1:exon
so has part: feature:1070441-1070575:-1:exon
so has part: feature:1068306-1068736:-1:exon
so has part: feature:1067370-1067529:-1:exon
so has part: feature:1066646-1066797:-1:exon
so has part: feature:1066099-1066301:-1:exon
so has part: feature:1065476-1065638:-1:exon
so has part: feature:1065065-1065175:-1:exon
so has part: feature:1064423-1064555:-1:exon
so has part: feature:1063728-1063844:-1:exon
so has part: feature:1063309-1063449:-1:exon
so has part: feature:1062785-1062859:-1:exon
so has part: feature:1062442-1062620:-1:exon

XP_034608410.1
type: Protein
SIO_000068: ncbiprotein

position:1062442:-1
position: 1062442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071462:-1
position: 1071462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1071357-1071462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1071177-1071277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070830-1071043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070441-1070575:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068306-1068736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1067370-1067529:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1066646-1066797:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1066099-1066301:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1065476-1065638:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1065065-1065175:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1064423-1064555:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1063728-1063844:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1063309-1063449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1062785-1062859:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1062442-1062620:-1:exon

LOC117867757
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117867757
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1064751..1064841)
location: region:1064751-1064841:-1
so has part: feature:1064751-1064841:-1:exon
subclass of: SO_0000578

117867757
type: Gene
SIO_000068: ncbigene

position:1064751:-1
position: 1064751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064841:-1
position: 1064841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1064751-1064841:-1:exon

LOC117867757
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: snoRNA
gene: LOC117867757
product: small nucleolar RNA SNORD91 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00580
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004643491.1
SIO_010081: LOC117867757
subclass of: SO_0000673
so part of: LOC117867757
location: complement(1064751..1064841)
location: region:1064751-1064841:-1
so has part: feature:1064751-1064841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1064751-1064841:-1:exon

POLDIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: POLDIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1076945..1085264)
location: region:1076945-1085264:-1
so has part: feature:1076945-1085264:-1:exon
subclass of: SO_0000010

117867342
type: Gene
SIO_000068: ncbigene

position:1076945:-1
position: 1076945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085264:-1
position: 1085264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076945-1085264:-1:exon

POLDIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: POLDIP2
product: DNA polymerase delta interacting protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_034752248.1
SIO_010081: POLDIP2
subclass of: SO_0000673
so part of: POLDIP2
location: complement(join(1076945..1077416,1078973..1079052,1080100..1080225,1080428..1080454,1081467..1081603,1081876..1081983,1082662..1082737,1083399..1083495,1084363..1084460,1084886..1084967,1085089..1085264))
location: region:1076945-1085264:-1
so has part: feature:1085089-1085264:-1:exon
so has part: feature:1084886-1084967:-1:exon
so has part: feature:1084363-1084460:-1:exon
so has part: feature:1083399-1083495:-1:exon
so has part: feature:1082662-1082737:-1:exon
so has part: feature:1081876-1081983:-1:exon
so has part: feature:1081467-1081603:-1:exon
so has part: feature:1080428-1080454:-1:exon
so has part: feature:1080100-1080225:-1:exon
so has part: feature:1078973-1079052:-1:exon
so has part: feature:1076945-1077416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1085089-1085264:-1:exon

position:1085089:-1
position: 1085089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1084886-1084967:-1:exon

position:1084886:-1
position: 1084886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084967:-1
position: 1084967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1084363-1084460:-1:exon

position:1084363:-1
position: 1084363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084460:-1
position: 1084460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1083399-1083495:-1:exon

position:1083399:-1
position: 1083399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1083495:-1
position: 1083495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1082662-1082737:-1:exon

position:1082662:-1
position: 1082662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082737:-1
position: 1082737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1081876-1081983:-1:exon

position:1081876:-1
position: 1081876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081983:-1
position: 1081983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1081467-1081603:-1:exon

position:1081467:-1
position: 1081467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081603:-1
position: 1081603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1080428-1080454:-1:exon

position:1080428:-1
position: 1080428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080454:-1
position: 1080454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1080100-1080225:-1:exon

position:1080100:-1
position: 1080100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080225:-1
position: 1080225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1078973-1079052:-1:exon

position:1078973:-1
position: 1078973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079052:-1
position: 1079052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1076945-1077416:-1:exon

position:1077416:-1
position: 1077416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLDIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: POLDIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polymerase delta-interacting protein 2
translation: MSGGAARRYLAAALSGCRVRALPLRAAPSRGLRALCAGGPGASQLPPRRHLSSRNRAEGKVLEPVGVFEVPKPQGKYETGQLFLHSVFGYRGIVLFPWQARLYDRDVASPVPEKSESAAGHGSKEVKGKTHTYYQVLIDARDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSHEDILPYSSTDQVPIQHELFERFLMYDQTKVPPFVARDTLCAWQEKNHPWLELSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDNEVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQASSGHMWGTFRFERPDGSHFDVRIPPFSLESNKDEKTPPSGLHW
SIO_010081: POLDIP2
subclass of: SO_0000673
so part of: POLDIP2
location: complement(join(1077302..1077416,1078973..1079052,1080100..1080225,1080428..1080454,1081467..1081603,1081876..1081983,1082662..1082737,1083399..1083495,1084363..1084460,1084886..1084967,1085089..1085249))
location: region:1077302-1085249:-1
so has part: feature:1085089-1085249:-1:exon
so has part: feature:1084886-1084967:-1:exon
so has part: feature:1084363-1084460:-1:exon
so has part: feature:1083399-1083495:-1:exon
so has part: feature:1082662-1082737:-1:exon
so has part: feature:1081876-1081983:-1:exon
so has part: feature:1081467-1081603:-1:exon
so has part: feature:1080428-1080454:-1:exon
so has part: feature:1080100-1080225:-1:exon
so has part: feature:1078973-1079052:-1:exon
so has part: feature:1077302-1077416:-1:exon

XP_034608139.1
type: Protein
SIO_000068: ncbiprotein

position:1077302:-1
position: 1077302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085249:-1
position: 1085249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1085089-1085249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084886-1084967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084363-1084460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1083399-1083495:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1082662-1082737:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1081876-1081983:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1081467-1081603:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080428-1080454:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1080100-1080225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1078973-1079052:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1077302-1077416:-1:exon

TMEM199
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: TMEM199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1085377..1090585
location: region:1085377-1090585:1
so has part: feature:1085377-1090585:1:exon
subclass of: SO_0000010

117867343
type: Gene
SIO_000068: ncbigene

position:1085377:1
position: 1085377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090585:1
position: 1090585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1085377-1090585:1:exon

TMEM199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TMEM199
product: transmembrane protein 199
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_034752249.1
SIO_010081: TMEM199
subclass of: SO_0000673
so part of: TMEM199
location: join(1085377..1085667,1087354..1087427,1087605..1087694,1088264..1088306,1088959..1089071,1089255..1090585)
location: region:1085377-1090585:1
so has part: feature:1085377-1085667:1:exon
so has part: feature:1087354-1087427:1:exon
so has part: feature:1087605-1087694:1:exon
so has part: feature:1088264-1088306:1:exon
so has part: feature:1088959-1089071:1:exon
so has part: feature:1089255-1090585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1085377-1085667:1:exon

position:1085667:1
position: 1085667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1087354-1087427:1:exon

position:1087354:1
position: 1087354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087427:1
position: 1087427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1087605-1087694:1:exon

position:1087605:1
position: 1087605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087694:1
position: 1087694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1088264-1088306:1:exon

position:1088264:1
position: 1088264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088306:1
position: 1088306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1088959-1089071:1:exon

position:1088959:1
position: 1088959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089071:1
position: 1089071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1089255-1090585:1:exon

position:1089255:1
position: 1089255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TMEM199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 199
translation: MASSILAGERLVRAAASASGELGRLPRELRAELEAALGAQAAGRGPLVPFSLLRKLQGALRQAGSPVYLHELLEGSEIYLPEVEKPPRNPELVARLEKIKAKLANEEYKRITRNINCQELNRYGTLADLGRQVRSMKAVVITIFNFIVTVVAAFACTYLGSQYIFTEMAARVLSAVIVASVVGLAELYVMVRTMEGELGGL
SIO_010081: TMEM199
subclass of: SO_0000673
so part of: TMEM199
location: join(1085478..1085667,1087354..1087427,1087605..1087694,1088264..1088306,1088959..1089071,1089255..1089350)
location: region:1085478-1089350:1
so has part: feature:1085478-1085667:1:exon
so has part: feature:1087354-1087427:1:exon
so has part: feature:1087605-1087694:1:exon
so has part: feature:1088264-1088306:1:exon
so has part: feature:1088959-1089071:1:exon
so has part: feature:1089255-1089350:1:exon

XP_034608140.1
type: Protein
SIO_000068: ncbiprotein

position:1085478:1
position: 1085478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089350:1
position: 1089350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1085478-1085667:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1087354-1087427:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1087605-1087694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1088264-1088306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1088959-1089071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1089255-1089350:1:exon

SEBOX
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SEBOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1095889..1099799)
location: region:1095889-1099799:-1
so has part: feature:1095889-1099799:-1:exon
subclass of: SO_0000010

117867727
type: Gene
SIO_000068: ncbigene

position:1095889:-1
position: 1095889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099799:-1
position: 1099799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095889-1099799:-1:exon

SEBOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SEBOX
product: SEBOX homeobox, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034752969.1
SIO_010081: SEBOX
subclass of: SO_0000673
so part of: SEBOX
location: complement(join(1095889..1097142,1097285..1097472,1099317..1099799))
location: region:1095889-1099799:-1
so has part: feature:1099317-1099799:-1:exon
so has part: feature:1097285-1097472:-1:exon
so has part: feature:1095889-1097142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1099317-1099799:-1:exon

position:1099317:-1
position: 1099317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1097285-1097472:-1:exon

position:1097285:-1
position: 1097285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097472:-1
position: 1097472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1095889-1097142:-1:exon

position:1097142:-1
position: 1097142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SEBOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SEBOX
product: SEBOX homeobox, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_034752968.1
SIO_010081: SEBOX
subclass of: SO_0000673
so part of: SEBOX
location: complement(join(1095889..1097142,1097285..1097472,1098804..1099799))
location: region:1095889-1099799:-1
so has part: feature:1098804-1099799:-1:exon
so has part: feature:1097285-1097472:-1:exon
so has part: feature:1095889-1097142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1098804-1099799:-1:exon

position:1098804:-1
position: 1098804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1097285-1097472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1095889-1097142:-1:exon

SEBOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SEBOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein SEBOX isoform X2
translation: MGSAASCLPQRGSRPKPERGAGGCPAGPRRRKRTTFSRGQLCELERVFAALPYPDIGTRERLAELTHLPEAKIQVWFQNRRARRIKSGKPEQPSCRRALASKPPPSCPPPPQGQGARSQQVPELRLPGSSPQQCLGQALPGLVSAFQGQLLWEDSCQPPCSQAGAQWPVAAPGQAGPQGADPTAGEGLSYWDVFPAQTSLGYISDLIYNAAIITNLGEP
SIO_010081: SEBOX
subclass of: SO_0000673
so part of: SEBOX
location: complement(join(1096705..1097142,1097285..1097472,1099317..1099350))
location: region:1096705-1099350:-1
so has part: feature:1099317-1099350:-1:exon
so has part: feature:1097285-1097472:-1:exon
so has part: feature:1096705-1097142:-1:exon

XP_034608860.1
type: Protein
SIO_000068: ncbiprotein

position:1096705:-1
position: 1096705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099350:-1
position: 1099350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1099317-1099350:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1097285-1097472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1096705-1097142:-1:exon

SEBOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SEBOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein SEBOX isoform X1
translation: MLNRAGADGPTPFRTANPLLTPSHHRGACGQLRTASQPPGINRGCAAPMAICQAGRLTATSPGHPALCAARLGSRPKPERGAGGCPAGPRRRKRTTFSRGQLCELERVFAALPYPDIGTRERLAELTHLPEAKIQVWFQNRRARRIKSGKPEQPSCRRALASKPPPSCPPPPQGQGARSQQVPELRLPGSSPQQCLGQALPGLVSAFQGQLLWEDSCQPPCSQAGAQWPVAAPGQAGPQGADPTAGEGLSYWDVFPAQTSLGYISDLIYNAAIITNLGEP
SIO_010081: SEBOX
subclass of: SO_0000673
so part of: SEBOX
location: complement(join(1096705..1097142,1097285..1097472,1098804..1099020))
location: region:1096705-1099020:-1
so has part: feature:1098804-1099020:-1:exon
so has part: feature:1097285-1097472:-1:exon
so has part: feature:1096705-1097142:-1:exon

XP_034608859.1
type: Protein
SIO_000068: ncbiprotein

position:1099020:-1
position: 1099020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1098804-1099020:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1097285-1097472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1096705-1097142:-1:exon

KIF12
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: KIF12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1099799..1108300
location: region:1099799-1108300:1
so has part: feature:1099799-1108300:1:exon
subclass of: SO_0000010

117867729
type: Gene
SIO_000068: ncbigene

position:1099799:1
position: 1099799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108300:1
position: 1108300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1099799-1108300:1:exon

KIF12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: KIF12
product: kinesin family member 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034752970.1
SIO_010081: KIF12
subclass of: SO_0000673
so part of: KIF12
location: join(1099799..1100347,1100450..1100528,1100615..1100736,1101284..1101359,1101976..1102110,1102316..1102451,1102945..1103036,1103367..1103508,1103669..1103787,1104035..1104139,1104543..1104678,1104879..1105008,1106584..1106716,1107170..1107312,1107583..1107737,1108135..1108300)
location: region:1099799-1108300:1
so has part: feature:1099799-1100347:1:exon
so has part: feature:1100450-1100528:1:exon
so has part: feature:1100615-1100736:1:exon
so has part: feature:1101284-1101359:1:exon
so has part: feature:1101976-1102110:1:exon
so has part: feature:1102316-1102451:1:exon
so has part: feature:1102945-1103036:1:exon
so has part: feature:1103367-1103508:1:exon
so has part: feature:1103669-1103787:1:exon
so has part: feature:1104035-1104139:1:exon
so has part: feature:1104543-1104678:1:exon
so has part: feature:1104879-1105008:1:exon
so has part: feature:1106584-1106716:1:exon
so has part: feature:1107170-1107312:1:exon
so has part: feature:1107583-1107737:1:exon
so has part: feature:1108135-1108300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1099799-1100347:1:exon

position:1100347:1
position: 1100347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1100450-1100528:1:exon

position:1100450:1
position: 1100450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100528:1
position: 1100528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1100615-1100736:1:exon

position:1100615:1
position: 1100615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100736:1
position: 1100736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1101284-1101359:1:exon

position:1101284:1
position: 1101284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101359:1
position: 1101359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1101976-1102110:1:exon

position:1101976:1
position: 1101976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102110:1
position: 1102110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1102316-1102451:1:exon

position:1102316:1
position: 1102316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102451:1
position: 1102451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1102945-1103036:1:exon

position:1102945:1
position: 1102945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103036:1
position: 1103036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1103367-1103508:1:exon

position:1103367:1
position: 1103367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103508:1
position: 1103508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1103669-1103787:1:exon

position:1103669:1
position: 1103669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103787:1
position: 1103787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1104035-1104139:1:exon

position:1104035:1
position: 1104035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104139:1
position: 1104139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1104543-1104678:1:exon

position:1104543:1
position: 1104543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104678:1
position: 1104678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1104879-1105008:1:exon

position:1104879:1
position: 1104879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105008:1
position: 1105008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1106584-1106716:1:exon

position:1106584:1
position: 1106584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106716:1
position: 1106716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1107170-1107312:1:exon

position:1107170:1
position: 1107170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107312:1
position: 1107312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1107583-1107737:1:exon

position:1107583:1
position: 1107583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107737:1
position: 1107737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1108135-1108300:1:exon

position:1108135:1
position: 1108135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KIF12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: KIF12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF12
translation: MRLHGPVRAPGSPRGGSRGCQSPCSPHGLFSRSPAGDQEDPTDRKETRLRVVLRVRPLTCPERRRGDQRVVHCLGDNTVYVKAAGQEAAFRLSAVFDAGTSQEGVFEGSGMKRLIELAANGFSCTAFAFGQTGSGKTYTLMGPLAQSEGQPATPYLGGLMQRAFVCLLEQTQHYRPGLVLSASYVEIHNEQVRDLLSPGSPRPLPVRWSKTRGFYIENLLTVEFGSLEAIMDLLQEGTRRRRSAAHALNGHSSRSHALLTIRIRRKAVSPDPSSCQKGVLCFVDLAGSERVKDTGSAGEHLVEASNINRSLLALGHCISLLVDPRRRRSHIPYRDSKLTRLLAESLGGSGITLMVACISPSSRCLPETLRTLRFASRAKKVTTKPVAHRVSREKLLQSLEQEIQALREENLSLRQQLRLPRILGAGTAAYTAPTQLPECQGESHAPGQRGPPRRAPGSARRSLCGLLQEFVLENEQHRHLESLPALSSWGQARRSPEAAPSSCSIQALPCARPAPSAAQCGHLPPWEVLTAQSGSRFQGTSQGSPWEDPAQPWPQSQQRPVAPWLLHGKRSLGRRKSSVGSCLLLRDTQQQGPEPPPGLEGQVAPSAPPLPGQPGSSTGHQAGADPELRLEEVLDSLQEQLQSYSLRDARD
SIO_010081: KIF12
subclass of: SO_0000673
so part of: KIF12
location: join(1100187..1100347,1100450..1100528,1100615..1100736,1101284..1101359,1101976..1102110,1102316..1102451,1102945..1103036,1103367..1103508,1103669..1103787,1104035..1104139,1104543..1104678,1104879..1105008,1106584..1106716,1107170..1107312,1107583..1107737,1108135..1108226)
location: region:1100187-1108226:1
so has part: feature:1100187-1100347:1:exon
so has part: feature:1100450-1100528:1:exon
so has part: feature:1100615-1100736:1:exon
so has part: feature:1101284-1101359:1:exon
so has part: feature:1101976-1102110:1:exon
so has part: feature:1102316-1102451:1:exon
so has part: feature:1102945-1103036:1:exon
so has part: feature:1103367-1103508:1:exon
so has part: feature:1103669-1103787:1:exon
so has part: feature:1104035-1104139:1:exon
so has part: feature:1104543-1104678:1:exon
so has part: feature:1104879-1105008:1:exon
so has part: feature:1106584-1106716:1:exon
so has part: feature:1107170-1107312:1:exon
so has part: feature:1107583-1107737:1:exon
so has part: feature:1108135-1108226:1:exon

XP_034608861.1
type: Protein
SIO_000068: ncbiprotein

position:1100187:1
position: 1100187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108226:1
position: 1108226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1100187-1100347:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1100450-1100528:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1100615-1100736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1101284-1101359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1101976-1102110:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1102316-1102451:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1102945-1103036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1103367-1103508:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1103669-1103787:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1104035-1104139:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1104543-1104678:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1104879-1105008:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1106584-1106716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1107170-1107312:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1107583-1107737:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1108135-1108226:1:exon

VTN
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: VTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1108441..1118282)
location: region:1108441-1118282:-1
so has part: feature:1108441-1118282:-1:exon
subclass of: SO_0000010

117867726
type: Gene
SIO_000068: ncbigene

position:1108441:-1
position: 1108441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118282:-1
position: 1118282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1108441-1118282:-1:exon

VTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: VTN
product: vitronectin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_034752967.1
SIO_010081: VTN
subclass of: SO_0000673
so part of: VTN
location: complement(join(1108441..1108641,1109063..1109347,1110117..1110269,1110978..1111134,1111656..1111795,1112318..1112623,1113100..1113219,1113934..1114082,1118143..1118282))
location: region:1108441-1118282:-1
so has part: feature:1118143-1118282:-1:exon
so has part: feature:1113934-1114082:-1:exon
so has part: feature:1113100-1113219:-1:exon
so has part: feature:1112318-1112623:-1:exon
so has part: feature:1111656-1111795:-1:exon
so has part: feature:1110978-1111134:-1:exon
so has part: feature:1110117-1110269:-1:exon
so has part: feature:1109063-1109347:-1:exon
so has part: feature:1108441-1108641:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1118143-1118282:-1:exon

position:1118143:-1
position: 1118143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1113934-1114082:-1:exon

position:1113934:-1
position: 1113934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114082:-1
position: 1114082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1113100-1113219:-1:exon

position:1113100:-1
position: 1113100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113219:-1
position: 1113219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1112318-1112623:-1:exon

position:1112318:-1
position: 1112318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112623:-1
position: 1112623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1111656-1111795:-1:exon

position:1111656:-1
position: 1111656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111795:-1
position: 1111795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1110978-1111134:-1:exon

position:1110978:-1
position: 1110978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111134:-1
position: 1111134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1110117-1110269:-1:exon

position:1110117:-1
position: 1110117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110269:-1
position: 1110269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1109063-1109347:-1:exon

position:1109063:-1
position: 1109063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109347:-1
position: 1109347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1108441-1108641:-1:exon

position:1108641:-1
position: 1108641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: VTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitronectin
translation: MRLLVPALMLGLLCGAFAAEESCVGRCEDGFHAQRKCQCDALCVYYQSCCSDYAMACKSKVTRGDMFAFPEDDYMDYSTNATLGETTETLDTATDPPTTSPDPVTAATVDSVTVPGSGVPLLVPSGPEEVEQEEVEEVEELCSGKPFDAFTDLKNGSLYAFRGKYVYELDEKSVRPGYPKLIRDVWGIEGPVDAAFTRINCQGKTYIFQGSQYWRFNEGALDPGYPRNISDGFQDIPDDIDAAFALPAHSYHGQERVYFFKDKHYWAYDFANQPSQQDCEMSSPSLVFDHYALMQGDSWEDLFQLLFGGTPYTGASGPRYISRDWRGLPRPLDAAMAGRIYVSSKASSWSRRRKSRRHRKKYRSRRPAAHTFWDWLQDESDSSDTDPDWLPGGSQCQPIQSVYFFVADKYYRLNLRSKRVDFARPRYPRPIAQYWLGCP
SIO_010081: VTN
subclass of: SO_0000673
so part of: VTN
location: complement(join(1108544..1108641,1109063..1109347,1110117..1110269,1110978..1111134,1111656..1111795,1112318..1112623,1113100..1113219,1113934..1113994))
location: region:1108544-1113994:-1
so has part: feature:1113934-1113994:-1:exon
so has part: feature:1113100-1113219:-1:exon
so has part: feature:1112318-1112623:-1:exon
so has part: feature:1111656-1111795:-1:exon
so has part: feature:1110978-1111134:-1:exon
so has part: feature:1110117-1110269:-1:exon
so has part: feature:1109063-1109347:-1:exon
so has part: feature:1108544-1108641:-1:exon

XP_034608858.1
type: Protein
SIO_000068: ncbiprotein

position:1108544:-1
position: 1108544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113994:-1
position: 1113994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113934-1113994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1113100-1113219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1112318-1112623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1111656-1111795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1110978-1111134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1110117-1110269:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1109063-1109347:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1108544-1108641:-1:exon

SARM1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SARM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1124241..1139367
location: region:1124241-1139367:1
so has part: feature:1124241-1139367:1:exon
subclass of: SO_0000010

117867730
type: Gene
SIO_000068: ncbigene

position:1124241:1
position: 1124241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139367:1
position: 1139367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1124241-1139367:1:exon

SARM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SARM1
product: sterile alpha and TIR motif containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_034752971.1
SIO_010081: SARM1
subclass of: SO_0000673
so part of: SARM1
location: join(1124241..1125248,1131834..1132452,1132712..1132924,1133530..1133621,1134374..1134609,1134787..1134889,1135328..1135517,1135638..1135759,1137483..1139367)
location: region:1124241-1139367:1
so has part: feature:1124241-1125248:1:exon
so has part: feature:1131834-1132452:1:exon
so has part: feature:1132712-1132924:1:exon
so has part: feature:1133530-1133621:1:exon
so has part: feature:1134374-1134609:1:exon
so has part: feature:1134787-1134889:1:exon
so has part: feature:1135328-1135517:1:exon
so has part: feature:1135638-1135759:1:exon
so has part: feature:1137483-1139367:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1124241-1125248:1:exon

position:1125248:1
position: 1125248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1131834-1132452:1:exon

position:1131834:1
position: 1131834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132452:1
position: 1132452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1132712-1132924:1:exon

position:1132712:1
position: 1132712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132924:1
position: 1132924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1133530-1133621:1:exon

position:1133530:1
position: 1133530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133621:1
position: 1133621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1134374-1134609:1:exon

position:1134374:1
position: 1134374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134609:1
position: 1134609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1134787-1134889:1:exon

position:1134787:1
position: 1134787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134889:1
position: 1134889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1135328-1135517:1:exon

position:1135328:1
position: 1135328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135517:1
position: 1135517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1135638-1135759:1:exon

position:1135638:1
position: 1135638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135759:1
position: 1135759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1137483-1139367:1:exon

position:1137483:1
position: 1137483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SARM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SARM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(+) hydrolase SARM1 isoform X1
translation: MLLSWGQILLVGAGPEMGDITPRGRGRMRNRNRQQCLEQAVQTAAANHSPGPERSASRQRQQHPGLGGEKSWHTPSTAAGTQPSSTPPPPAIPASFPQPPPALFSIPPLLHLPSAARSIFCSRPSEGTRPCSRWPAQEPVHSALQLTLCPPGRVSGQGSCPLPWRLSWDAALGVPMVLTLLVSIHKLCRFFAMSSSERVSVPEYMSHACLWPGAGAACNHREVSPGVSTDIQVALDRILPDLHLAISSMKQAVDPEDLRKGIAEIFQLVEEAWVMPTLGRDVAKALCDVIRLEGGLDLLLNLLQATELETKCQASKLLEQILVAENRDRIARIGLGVILNLTKERDSPQVARSLSGILEHMFKHTEETCFQLISDGGLDAILYWCRWTDLVVLRHCAMALANCAMYGGQANQRLMIEKNTAEWLFPLVFSKDDELIRLHACLAITVLATNKEIEKEVERSGTLALVEPFIASLDPERFACDLLDSSDNSQGRTAKDLQHLVPLLDSSRLEAQCIALFYLCIEATIKARQKKTKIFSEIGAAQSLKRIVCYSTNTTASSLAKKALRMMGEEVPRRILPTVSSWKPIEVQTWLQQTGFNKYCQSFLEHEVDGDLLLRLTETDLREDLGMASSIIRKRFFRELTELKTYANYSTCDRSNLADWLGSVDPKFRQYTYNLVTCGIDRNFLHRVTEEQLQEDCRINVGFHRVRILSAAREMLHSPLPCSGCKSTSEGPDVFISYRRSTGSQLASLLKVHLQLHGFSVFIDVEKLEAGKFEDKLIQSVMSARNFVLVLSPNTLDKCMGDPDRKDWVHKEIVTALSCGKNIIPVADHFEWPDPQDLPEDMRAVLKFNGIKWSHEYQEATIEKIIRFLQGRSSRDSSAGSENSLECAAPLGQTYSQAGPPHIL
SIO_010081: SARM1
subclass of: SO_0000673
so part of: SARM1
location: join(1124269..1125248,1131834..1132452,1132712..1132924,1133530..1133621,1134374..1134609,1134787..1134889,1135328..1135517,1135638..1135759,1137483..1137642)
location: region:1124269-1137642:1
so has part: feature:1124269-1125248:1:exon
so has part: feature:1131834-1132452:1:exon
so has part: feature:1132712-1132924:1:exon
so has part: feature:1133530-1133621:1:exon
so has part: feature:1134374-1134609:1:exon
so has part: feature:1134787-1134889:1:exon
so has part: feature:1135328-1135517:1:exon
so has part: feature:1135638-1135759:1:exon
so has part: feature:1137483-1137642:1:exon

XP_034608862.1
type: Protein
SIO_000068: ncbiprotein

position:1124269:1
position: 1124269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137642:1
position: 1137642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1124269-1125248:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1131834-1132452:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132712-1132924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133530-1133621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1134374-1134609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134787-1134889:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1135328-1135517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1135638-1135759:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137483-1137642:1:exon

SARM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SARM1
product: sterile alpha and TIR motif containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034752972.1
SIO_010081: SARM1
subclass of: SO_0000673
so part of: SARM1
location: join(1127566..1128409,1131834..1132452,1132712..1132924,1133530..1133621,1134374..1134609,1134787..1134889,1135328..1135517,1135638..1135759,1137483..1137642)
location: region:1127566-1137642:1
so has part: feature:1127566-1128409:1:exon
so has part: feature:1131834-1132452:1:exon
so has part: feature:1132712-1132924:1:exon
so has part: feature:1133530-1133621:1:exon
so has part: feature:1134374-1134609:1:exon
so has part: feature:1134787-1134889:1:exon
so has part: feature:1135328-1135517:1:exon
so has part: feature:1135638-1135759:1:exon
so has part: feature:1137483-1137642:1:exon

position:1127566:1
position: 1127566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1127566-1128409:1:exon

position:1128409:1
position: 1128409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1131834-1132452:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132712-1132924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133530-1133621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1134374-1134609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134787-1134889:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1135328-1135517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1135638-1135759:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137483-1137642:1:exon

SARM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SARM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(+) hydrolase SARM1 isoform X2
translation: MLRRDRIARIGLGVILNLTKERDSPQVARSLSGILEHMFKHTEETCFQLISDGGLDAILYWCRWTDLVVLRHCAMALANCAMYGGQANQRLMIEKNTAEWLFPLVFSKDDELIRLHACLAITVLATNKEIEKEVERSGTLALVEPFIASLDPERFACDLLDSSDNSQGRTAKDLQHLVPLLDSSRLEAQCIALFYLCIEATIKARQKKTKIFSEIGAAQSLKRIVCYSTNTTASSLAKKALRMMGEEVPRRILPTVSSWKPIEVQTWLQQTGFNKYCQSFLEHEVDGDLLLRLTETDLREDLGMASSIIRKRFFRELTELKTYANYSTCDRSNLADWLGSVDPKFRQYTYNLVTCGIDRNFLHRVTEEQLQEDCRINVGFHRVRILSAAREMLHSPLPCSGCKSTSEGPDVFISYRRSTGSQLASLLKVHLQLHGFSVFIDVEKLEAGKFEDKLIQSVMSARNFVLVLSPNTLDKCMGDPDRKDWVHKEIVTALSCGKNIIPVADHFEWPDPQDLPEDMRAVLKFNGIKWSHEYQEATIEKIIRFLQGRSSRDSSAGSENSLECAAPLGQTYSQAGPPHIL
SIO_010081: SARM1
subclass of: SO_0000673
so part of: SARM1
location: join(1128399..1128409,1131834..1132452,1132712..1132924,1133530..1133621,1134374..1134609,1134787..1134889,1135328..1135517,1135638..1135759,1137483..1137642)
location: region:1128399-1137642:1
so has part: feature:1128399-1128409:1:exon
so has part: feature:1131834-1132452:1:exon
so has part: feature:1132712-1132924:1:exon
so has part: feature:1133530-1133621:1:exon
so has part: feature:1134374-1134609:1:exon
so has part: feature:1134787-1134889:1:exon
so has part: feature:1135328-1135517:1:exon
so has part: feature:1135638-1135759:1:exon
so has part: feature:1137483-1137642:1:exon

XP_034608863.1
type: Protein
SIO_000068: ncbiprotein

position:1128399:1
position: 1128399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1128399-1128409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1131834-1132452:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132712-1132924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133530-1133621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1134374-1134609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134787-1134889:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1135328-1135517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1135638-1135759:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137483-1137642:1:exon

SARM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SARM1
product: sterile alpha and TIR motif containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034752973.1
SIO_010081: SARM1
subclass of: SO_0000673
so part of: SARM1
location: join(1130835..1131313,1131834..1132452,1132712..1132924,1133530..1133621,1134374..1134609,1134787..1134889,1135328..1135517,1135638..1135759,1137483..1139365)
location: region:1130835-1139365:1
so has part: feature:1130835-1131313:1:exon
so has part: feature:1131834-1132452:1:exon
so has part: feature:1132712-1132924:1:exon
so has part: feature:1133530-1133621:1:exon
so has part: feature:1134374-1134609:1:exon
so has part: feature:1134787-1134889:1:exon
so has part: feature:1135328-1135517:1:exon
so has part: feature:1135638-1135759:1:exon
so has part: feature:1137483-1139365:1:exon

position:1130835:1
position: 1130835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139365:1
position: 1139365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1130835-1131313:1:exon

position:1131313:1
position: 1131313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1131834-1132452:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132712-1132924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133530-1133621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1134374-1134609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134787-1134889:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1135328-1135517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1135638-1135759:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137483-1139365:1:exon

SARM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SARM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(+) hydrolase SARM1 isoform X3
translation: MFKHTEETCFQLISDGGLDAILYWCRWTDLVVLRHCAMALANCAMYGGQANQRLMIEKNTAEWLFPLVFSKDDELIRLHACLAITVLATNKEIEKEVERSGTLALVEPFIASLDPERFACDLLDSSDNSQGRTAKDLQHLVPLLDSSRLEAQCIALFYLCIEATIKARQKKTKIFSEIGAAQSLKRIVCYSTNTTASSLAKKALRMMGEEVPRRILPTVSSWKPIEVQTWLQQTGFNKYCQSFLEHEVDGDLLLRLTETDLREDLGMASSIIRKRFFRELTELKTYANYSTCDRSNLADWLGSVDPKFRQYTYNLVTCGIDRNFLHRVTEEQLQEDCRINVGFHRVRILSAAREMLHSPLPCSGCKSTSEGPDVFISYRRSTGSQLASLLKVHLQLHGFSVFIDVEKLEAGKFEDKLIQSVMSARNFVLVLSPNTLDKCMGDPDRKDWVHKEIVTALSCGKNIIPVADHFEWPDPQDLPEDMRAVLKFNGIKWSHEYQEATIEKIIRFLQGRSSRDSSAGSENSLECAAPLGQTYSQAGPPHIL
SIO_010081: SARM1
subclass of: SO_0000673
so part of: SARM1
location: join(1131934..1132452,1132712..1132924,1133530..1133621,1134374..1134609,1134787..1134889,1135328..1135517,1135638..1135759,1137483..1137642)
location: region:1131934-1137642:1
so has part: feature:1131934-1132452:1:exon
so has part: feature:1132712-1132924:1:exon
so has part: feature:1133530-1133621:1:exon
so has part: feature:1134374-1134609:1:exon
so has part: feature:1134787-1134889:1:exon
so has part: feature:1135328-1135517:1:exon
so has part: feature:1135638-1135759:1:exon
so has part: feature:1137483-1137642:1:exon

XP_034608864.1
type: Protein
SIO_000068: ncbiprotein

position:1131934:1
position: 1131934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1131934-1132452:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132712-1132924:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133530-1133621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134374-1134609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1134787-1134889:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1135328-1135517:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1135638-1135759:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1137483-1137642:1:exon

SLC46A1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SLC46A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1142771..1148254)
location: region:1142771-1148254:-1
so has part: feature:1142771-1148254:-1:exon
subclass of: SO_0000010

117867731
type: Gene
SIO_000068: ncbigene

position:1142771:-1
position: 1142771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148254:-1
position: 1148254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1142771-1148254:-1:exon

SLC46A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SLC46A1
product: solute carrier family 46 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_034752975.1
SIO_010081: SLC46A1
subclass of: SO_0000673
so part of: SLC46A1
location: complement(join(1142771..1144163,1145061..1145217,1146319..1146402,1146837..1147689,1147974..1148254))
location: region:1142771-1148254:-1
so has part: feature:1147974-1148254:-1:exon
so has part: feature:1146837-1147689:-1:exon
so has part: feature:1146319-1146402:-1:exon
so has part: feature:1145061-1145217:-1:exon
so has part: feature:1142771-1144163:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1147974-1148254:-1:exon

position:1147974:-1
position: 1147974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1146837-1147689:-1:exon

position:1146837:-1
position: 1146837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147689:-1
position: 1147689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1146319-1146402:-1:exon

position:1146319:-1
position: 1146319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146402:-1
position: 1146402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1145061-1145217:-1:exon

position:1145061:-1
position: 1145061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145217:-1
position: 1145217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1142771-1144163:-1:exon

position:1144163:-1
position: 1144163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC46A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SLC46A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-coupled folate transporter
translation: MADSPGPAGGGRPRCPRAAPTVEPVLFLGTVALGLQAPLCTQYLWERLGAELGYNGSAGSGSPGCGNASGAGDPRQQEVETLASHWNLYINLAGFFVGLFSVTLFGPWSDSVGRRPALILPAVGMALQAAIYLLVMYLRLHVGYFLLGRILCGLMGDYNLILASCFAYVADISDQRSRTFRVAILEACLGVAGMLASIIGGQWRKAQGYINPFWLVFAVSLATALYVALCLQESVKERKPAKLFTLSHYMSVYKLYAAPGYQRSRQKLALYSLTFFLIVTIHFGARDVFVLYELSSPLCWGSDLIGYGSAASYLTYLSSLAGLRALQLCLEDTWVAELGLLSNISGLVVISLASTTPLMFTGYGILFLSMAATPVIRAKLSKLVDEKDQGALFASVACVEGLCSLVATGVFNSLYPASLHFMKGFPFLFGAIILLVPAALIGWIEISDTTPEYGHFTDAS
SIO_010081: SLC46A1
subclass of: SO_0000673
so part of: SLC46A1
location: complement(join(1144106..1144163,1145061..1145217,1146319..1146402,1146837..1147689,1147974..1148204))
location: region:1144106-1148204:-1
so has part: feature:1147974-1148204:-1:exon
so has part: feature:1146837-1147689:-1:exon
so has part: feature:1146319-1146402:-1:exon
so has part: feature:1145061-1145217:-1:exon
so has part: feature:1144106-1144163:-1:exon

XP_034608866.1
type: Protein
SIO_000068: ncbiprotein

position:1144106:-1
position: 1144106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148204:-1
position: 1148204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1147974-1148204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1146837-1147689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146319-1146402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145061-1145217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144106-1144163:-1:exon

SLC13A2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SLC13A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1159711..1184837
location: region:1159711-1184837:1
so has part: feature:1159711-1184837:1:exon
subclass of: SO_0000010

117867639
type: Gene
SIO_000068: ncbigene

position:1159711:1
position: 1159711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184837:1
position: 1184837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159711-1184837:1:exon

SLC13A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SLC13A2
product: solute carrier family 13 member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034752835.1
SIO_010081: SLC13A2
subclass of: SO_0000673
so part of: SLC13A2
location: join(1159711..1159975,1167864..1167992,1168315..1168451,1170054..1170280,1171291..1171477,1171723..1171845,1177401..1177622,1177899..1178011,1178907..1179028,1181137..1181298,1182208..1182345,1183746..1184837)
location: region:1159711-1184837:1
so has part: feature:1159711-1159975:1:exon
so has part: feature:1167864-1167992:1:exon
so has part: feature:1168315-1168451:1:exon
so has part: feature:1170054-1170280:1:exon
so has part: feature:1171291-1171477:1:exon
so has part: feature:1171723-1171845:1:exon
so has part: feature:1177401-1177622:1:exon
so has part: feature:1177899-1178011:1:exon
so has part: feature:1178907-1179028:1:exon
so has part: feature:1181137-1181298:1:exon
so has part: feature:1182208-1182345:1:exon
so has part: feature:1183746-1184837:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1159711-1159975:1:exon

position:1159975:1
position: 1159975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1167864-1167992:1:exon

position:1167864:1
position: 1167864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167992:1
position: 1167992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1168315-1168451:1:exon

position:1168315:1
position: 1168315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168451:1
position: 1168451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1170054-1170280:1:exon

position:1170054:1
position: 1170054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170280:1
position: 1170280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1171291-1171477:1:exon

position:1171291:1
position: 1171291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1171477:1
position: 1171477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1171723-1171845:1:exon

position:1171723:1
position: 1171723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1171845:1
position: 1171845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1177401-1177622:1:exon

position:1177401:1
position: 1177401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177622:1
position: 1177622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1177899-1178011:1:exon

position:1177899:1
position: 1177899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178011:1
position: 1178011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1178907-1179028:1:exon

position:1178907:1
position: 1178907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1179028:1
position: 1179028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1181137-1181298:1:exon

position:1181137:1
position: 1181137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181298:1
position: 1181298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1182208-1182345:1:exon

position:1182208:1
position: 1182208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182345:1
position: 1182345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1183746-1184837:1:exon

position:1183746:1
position: 1183746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC13A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SLC13A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 13 member 2
translation: MTTVWKVIVAHRNYLIAFLVPFLLLPLPLVVPTKEAQCGYVIILMALFWCMEVLPLGVTALFPVVLFPLMNIMDSTKVCMEYLKDTNMLFIGGLMVAIAVEHWNLHKRIALRVLLIVGVRPALLIMGFMSVTAFLSMWISNTATTAMMIPIAQAVLQQLHKSEQETSPVGHVAESINKAFELQEVPDKSDASQETQKQDNGHVLTVEEEEKLKDLKQLEEEKHLTFCKGMSLSVCYAASIGGIATLTGTTPNLVMKGQMDELFPANNNVVNFASWFMFAFPTMILLLALSWIWLQIMFLGFDFRKNFGCGANASTKAKQKMAYRVIKDEHKKLGPMRFSEIAVTVLFLLLVVLWFTRDPGFMPGWATNVFNKNGESYVTDATVVIFISLLMFLIPSEIPTYLWHNRAQQAPQQDSTRQIPVLPALLDWKTVNQKMPWNIVILLGGGFALAKGSEESGLSVWLGSKLTPLQNIPSPAIALLLCLLVATFTECTSNVATTTLFLPILASMAQAICLNPLYVMLPCTLSASLAFMLPVATPPNAIAFSYGQLKVIDMAKAGSVLNILGVLTIMLAINTWGYPLFNLNRFPVWANSTSAASCY
SIO_010081: SLC13A2
subclass of: SO_0000673
so part of: SLC13A2
location: join(1159874..1159975,1167864..1167992,1168315..1168451,1170054..1170280,1171291..1171477,1171723..1171845,1177401..1177622,1177899..1178011,1178907..1179028,1181137..1181298,1182208..1182345,1183746..1183883)
location: region:1159874-1183883:1
so has part: feature:1159874-1159975:1:exon
so has part: feature:1167864-1167992:1:exon
so has part: feature:1168315-1168451:1:exon
so has part: feature:1170054-1170280:1:exon
so has part: feature:1171291-1171477:1:exon
so has part: feature:1171723-1171845:1:exon
so has part: feature:1177401-1177622:1:exon
so has part: feature:1177899-1178011:1:exon
so has part: feature:1178907-1179028:1:exon
so has part: feature:1181137-1181298:1:exon
so has part: feature:1182208-1182345:1:exon
so has part: feature:1183746-1183883:1:exon

XP_034608726.1
type: Protein
SIO_000068: ncbiprotein

position:1159874:1
position: 1159874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183883:1
position: 1183883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159874-1159975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1167864-1167992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1168315-1168451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1170054-1170280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1171291-1171477:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1171723-1171845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1177401-1177622:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1177899-1178011:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1178907-1179028:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1181137-1181298:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1182208-1182345:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1183746-1183883:1:exon

FOXN1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: FOXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1231673..1252397
location: region:1231673-1252397:1
so has part: feature:1231673-1252397:1:exon
subclass of: SO_0000010

117867524
type: Gene
SIO_000068: ncbigene

position:1231673:1
position: 1231673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252397:1
position: 1252397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231673-1252397:1:exon

FOXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: FOXN1
product: forkhead box N1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034752657.1
SIO_010081: FOXN1
subclass of: SO_0000673
so part of: FOXN1
location: join(1231673..1231795,1233156..1233659,1237156..1237266,1241739..1241866,1243290..1243386,1249263..1249470,1250116..1250646,1252117..1252397)
location: region:1231673-1252397:1
so has part: feature:1231673-1231795:1:exon
so has part: feature:1233156-1233659:1:exon
so has part: feature:1237156-1237266:1:exon
so has part: feature:1241739-1241866:1:exon
so has part: feature:1243290-1243386:1:exon
so has part: feature:1249263-1249470:1:exon
so has part: feature:1250116-1250646:1:exon
so has part: feature:1252117-1252397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1231673-1231795:1:exon

position:1231795:1
position: 1231795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1233156-1233659:1:exon

position:1233156:1
position: 1233156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233659:1
position: 1233659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1237156-1237266:1:exon

position:1237156:1
position: 1237156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237266:1
position: 1237266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1241739-1241866:1:exon

position:1241739:1
position: 1241739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241866:1
position: 1241866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1243290-1243386:1:exon

position:1243290:1
position: 1243290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243386:1
position: 1243386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1249263-1249470:1:exon

position:1249263:1
position: 1249263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249470:1
position: 1249470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1250116-1250646:1:exon

position:1250116:1
position: 1250116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250646:1
position: 1250646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1252117-1252397:1:exon

position:1252117:1
position: 1252117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FOXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: FOXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein N1
translation: MVSLLEDQPNIKFSSSDTLESDQQDNLMQTQGDPSSPAQQTDNPSFSCQSYDPDSRTERKSSESSHSPSPSSPTQDQIHGRFPANQGIHSGKCKFKVSPNAEKFRRYSYEESTAGNYGRFLKSNRNPFHPYKREFSEDVFQETHPALTLDNNSFKNARSIEGFEDLPGSTGTGESESFPTHIQNISTEPTWCNNLQYNLTGQDQSSQVMRDSEVKLKTPPLEGQPSLYCYQPPVQQMYCPSHPFHQYSSGGSYPVTYITSSHYPYQRIAPQGSQESQQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKSGGSSRKGCLWALNPAKIDKMQEELQKWKRKDPVAVRKSMAKPEELDTLIGDKAEKLRSSTVSCNPTGVASSTVSRQMSVQPHSLSEPSLSSNIPQPLHPIHTTGPLRAKNPLPSLLGGHQTPCYTSPQVFPQISPTLMQQSPGIPQSIFPSADTQTELRAQPSTTQDSPLPAQTPPIHGMKILTEHSTARTMQDTLMQEADMSNDIDALNPSLIDFDLQGNLWEELKDDSLAVDPLVLISTSPISSQCFPSHYQMDSNSSSNTLTTQNSTPHSSLPDLQLTTLYSAFMELDTVSTAYLNNSGSKPIALV
SIO_010081: FOXN1
subclass of: SO_0000673
so part of: FOXN1
location: join(1231673..1231795,1233156..1233659,1237156..1237266,1241739..1241866,1243290..1243386,1249263..1249470,1250116..1250646,1252117..1252388)
location: region:1231673-1252388:1
so has part: feature:1231673-1231795:1:exon
so has part: feature:1233156-1233659:1:exon
so has part: feature:1237156-1237266:1:exon
so has part: feature:1241739-1241866:1:exon
so has part: feature:1243290-1243386:1:exon
so has part: feature:1249263-1249470:1:exon
so has part: feature:1250116-1250646:1:exon
so has part: feature:1252117-1252388:1:exon

XP_034608548.1
type: Protein
SIO_000068: ncbiprotein

position:1252388:1
position: 1252388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231673-1231795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1233156-1233659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1237156-1237266:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1241739-1241866:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1243290-1243386:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1249263-1249470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1250116-1250646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1252117-1252388:1:exon

LOC117867537
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117867537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1255653..1262079)
location: region:1255653-1262079:-1
so has part: feature:1255653-1262079:-1:exon
subclass of: SO_0000011

117867537
type: Gene
SIO_000068: ncbigene

position:1255653:-1
position: 1255653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262079:-1
position: 1262079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1255653-1262079:-1:exon

LOC117867537
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117867537
product: uncharacterized LOC117867537
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004643437.1
SIO_010081: LOC117867537
subclass of: SO_0000673
so part of: LOC117867537
location: complement(join(1255653..1255767,1257181..1257311,1262004..1262079))
location: region:1255653-1262079:-1
so has part: feature:1262004-1262079:-1:exon
so has part: feature:1257181-1257311:-1:exon
so has part: feature:1255653-1255767:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1262004-1262079:-1:exon

position:1262004:-1
position: 1262004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1257181-1257311:-1:exon

position:1257181:-1
position: 1257181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257311:-1
position: 1257311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1255653-1255767:-1:exon

position:1255767:-1
position: 1255767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UNC119
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: UNC119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1281155..1315346)
location: region:1281155-1315346:-1
so has part: feature:1281155-1315346:-1:exon
subclass of: SO_0000010

117867469
type: Gene
SIO_000068: ncbigene

position:1281155:-1
position: 1281155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1315346:-1
position: 1315346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1281155-1315346:-1:exon

UNC119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: UNC119
product: unc-119 lipid binding chaperone
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_034752524.1
SIO_010081: UNC119
subclass of: SO_0000673
so part of: UNC119
location: complement(join(1281155..1287798,1290141..1290313,1292581..1292683,1296023..1296136,1315109..1315346))
location: region:1281155-1315346:-1
so has part: feature:1315109-1315346:-1:exon
so has part: feature:1296023-1296136:-1:exon
so has part: feature:1292581-1292683:-1:exon
so has part: feature:1290141-1290313:-1:exon
so has part: feature:1281155-1287798:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1315109-1315346:-1:exon

position:1315109:-1
position: 1315109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1296023-1296136:-1:exon

position:1296023:-1
position: 1296023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296136:-1
position: 1296136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1292581-1292683:-1:exon

position:1292581:-1
position: 1292581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292683:-1
position: 1292683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1290141-1290313:-1:exon

position:1290141:-1
position: 1290141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290313:-1
position: 1290313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1281155-1287798:-1:exon

position:1287798:-1
position: 1287798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UNC119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: UNC119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein unc-119 homolog A
translation: MSEPALRADTRSGRRGSGGAAAMRVKKGGGAAAAGPEEELLRKPLIGPEDVLGLQKITGDYLCTPEENVYKIDFTRFKIRDMESGTVLFEITKPPASEREHGDKKDVDPNAGRFVRYQFTPAFLRLRQVGATVEFTVGDKPINNFRMIERHYFRDQLLKSFDFEFGFCIPSSKNTCEHIYEFPQLSEDLIREMILHPYETQSDSFYFVDNKLVMHNKADYSYSGGP
SIO_010081: UNC119
subclass of: SO_0000673
so part of: UNC119
location: complement(join(1287686..1287798,1290141..1290313,1292581..1292683,1296023..1296136,1315109..1315286))
location: region:1287686-1315286:-1
so has part: feature:1315109-1315286:-1:exon
so has part: feature:1296023-1296136:-1:exon
so has part: feature:1292581-1292683:-1:exon
so has part: feature:1290141-1290313:-1:exon
so has part: feature:1287686-1287798:-1:exon

XP_034608415.1
type: Protein
SIO_000068: ncbiprotein

position:1287686:-1
position: 1287686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1315286:-1
position: 1315286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1315109-1315286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1296023-1296136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1292581-1292683:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1290141-1290313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1287686-1287798:-1:exon

PIGS
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: PIGS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1316563..>1328046)
location: region:1316563-1328046:-1
so has part: feature:1316563-1328046:-1:exon
subclass of: SO_0000010

117867558
type: Gene
SIO_000068: ncbigene

position:1316563:-1
position: 1316563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328046:-1
position: 1328046
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1316563-1328046:-1:exon

PIGS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PIGS
product: phosphatidylinositol glycan anchor biosynthesis class S
inference: similar to RNA sequence, mRNA (same species):INSD:JW318406.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 44 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_034752719.1
SIO_010081: PIGS
subclass of: SO_0000673
so part of: PIGS
location: complement(join(1316563..1320465,1321337..1321547,1322800..1322900,1323312..1323457,1323873..1323987,1324081..1324223,1324644..1324854,1325468..1325559,1326127..1326216,1327181..1327292,1327907..>1328046))
location: region:1316563-1328046:-1
so has part: feature:1327907-1328046:-1:exon
so has part: feature:1327181-1327292:-1:exon
so has part: feature:1326127-1326216:-1:exon
so has part: feature:1325468-1325559:-1:exon
so has part: feature:1324644-1324854:-1:exon
so has part: feature:1324081-1324223:-1:exon
so has part: feature:1323873-1323987:-1:exon
so has part: feature:1323312-1323457:-1:exon
so has part: feature:1322800-1322900:-1:exon
so has part: feature:1321337-1321547:-1:exon
so has part: feature:1316563-1320465:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1327907-1328046:-1:exon

position:1327907:-1
position: 1327907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1327181-1327292:-1:exon

position:1327181:-1
position: 1327181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327292:-1
position: 1327292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1326127-1326216:-1:exon

position:1326127:-1
position: 1326127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326216:-1
position: 1326216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1325468-1325559:-1:exon

position:1325468:-1
position: 1325468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325559:-1
position: 1325559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1324644-1324854:-1:exon

position:1324644:-1
position: 1324644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324854:-1
position: 1324854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1324081-1324223:-1:exon

position:1324081:-1
position: 1324081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324223:-1
position: 1324223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1323873-1323987:-1:exon

position:1323873:-1
position: 1323873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1323987:-1
position: 1323987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1323312-1323457:-1:exon

position:1323312:-1
position: 1323312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1323457:-1
position: 1323457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1322800-1322900:-1:exon

position:1322800:-1
position: 1322800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322900:-1
position: 1322900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1321337-1321547:-1:exon

position:1321337:-1
position: 1321337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321547:-1
position: 1321547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1316563-1320465:-1:exon

position:1320465:-1
position: 1320465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIGS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PIGS
inference: similar to RNA sequence, mRNA (same species):INSD:JW318406.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 19 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: GPI transamidase component PIG-S
translation: MAADEAEKARGKRAALSFAAVALVLGLPLWWKTTETYRASLPYAGISALGSLRFQLTVPVSVVFAKGALPGAQWRRLPFTDTQEEESLLNSKTSVTARYETTYRSATATEQEALAMATVQEADAALLPLQEDSVGALTVYVIPETSLLLPQGIGVYVGKHRSAVMRGTQGPGDVLAAISARVRQIVQAMSFTTDSITTALSDRVPMDQLGTDTRRPFKSSLGYEITFSLLNPDPKSHDVHWDIEAAVNSYVQPFLDKLGSVANFSVDSQILYYAVLGVSPRFDKASSSFILSALSLPHVINPVEARLGSSATSLYPVLNFLLYVPERVHSPLYIQDKDGAAVGTNAFHSPRWGGIMVYNIDHPAPDRAPLPLRVDVDMVRVMEVFLAQLRLLFGISQVPLPEEFLLESPGNKGLTDWELDRLLWTRTVENIATVSTTLTSLAQLLDKIGNIVIKDDVASEVYRAVASAQTAMLELASGRLGSAFQASKEAVTSSERAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSLVKILREAKQSKKEPMKTD
SIO_010081: PIGS
subclass of: SO_0000673
so part of: PIGS
location: complement(join(1320190..1320465,1321337..1321547,1322800..1322900,1323312..1323457,1323873..1323987,1324081..1324223,1324644..1324854,1325468..1325559,1326127..1326216,1327181..1327292,1327907..>1328046))
location: region:1320190-1328046:-1
so has part: feature:1327907-1328046:-1:exon
so has part: feature:1327181-1327292:-1:exon
so has part: feature:1326127-1326216:-1:exon
so has part: feature:1325468-1325559:-1:exon
so has part: feature:1324644-1324854:-1:exon
so has part: feature:1324081-1324223:-1:exon
so has part: feature:1323873-1323987:-1:exon
so has part: feature:1323312-1323457:-1:exon
so has part: feature:1322800-1322900:-1:exon
so has part: feature:1321337-1321547:-1:exon
so has part: feature:1320190-1320465:-1:exon

XP_034608610.1
type: Protein
SIO_000068: ncbiprotein

position:1320190:-1
position: 1320190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327907-1328046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1327181-1327292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1326127-1326216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1325468-1325559:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1324644-1324854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1324081-1324223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1323873-1323987:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1323312-1323457:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1322800-1322900:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1321337-1321547:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1320190-1320465:-1:exon

SPAG5
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SPAG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1345670..1367136)
location: region:1345670-1367136:-1
so has part: feature:1345670-1367136:-1:exon
subclass of: SO_0000010

117867599
type: Gene
SIO_000068: ncbigene

position:1345670:-1
position: 1345670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367136:-1
position: 1367136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1345670-1367136:-1:exon

SPAG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SPAG5
product: sperm associated antigen 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034752786.1
SIO_010081: SPAG5
subclass of: SO_0000673
so part of: SPAG5
location: complement(join(1345670..1345940,1346501..1346581,1346760..1346813,1347336..1347488,1347668..1347748,1348422..1348533,1349042..1349165,1349616..1349690,1350647..1350740,1350890..1351055,1351467..1351600,1352845..1352926,1353174..1353267,1353732..1353846,1354647..1354781,1355206..1355298,1355674..1355793,1356461..1356595,1357017..1357109,1357973..1358092,1359294..1359486,1360472..1361706,1366759..1366908,1367043..1367136))
location: region:1345670-1367136:-1
so has part: feature:1367043-1367136:-1:exon
so has part: feature:1366759-1366908:-1:exon
so has part: feature:1360472-1361706:-1:exon
so has part: feature:1359294-1359486:-1:exon
so has part: feature:1357973-1358092:-1:exon
so has part: feature:1357017-1357109:-1:exon
so has part: feature:1356461-1356595:-1:exon
so has part: feature:1355674-1355793:-1:exon
so has part: feature:1355206-1355298:-1:exon
so has part: feature:1354647-1354781:-1:exon
so has part: feature:1353732-1353846:-1:exon
so has part: feature:1353174-1353267:-1:exon
so has part: feature:1352845-1352926:-1:exon
so has part: feature:1351467-1351600:-1:exon
so has part: feature:1350890-1351055:-1:exon
so has part: feature:1350647-1350740:-1:exon
so has part: feature:1349616-1349690:-1:exon
so has part: feature:1349042-1349165:-1:exon
so has part: feature:1348422-1348533:-1:exon
so has part: feature:1347668-1347748:-1:exon
so has part: feature:1347336-1347488:-1:exon
so has part: feature:1346760-1346813:-1:exon
so has part: feature:1346501-1346581:-1:exon
so has part: feature:1345670-1345940:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1367043-1367136:-1:exon

position:1367043:-1
position: 1367043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1366759-1366908:-1:exon

position:1366759:-1
position: 1366759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366908:-1
position: 1366908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1360472-1361706:-1:exon

position:1360472:-1
position: 1360472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361706:-1
position: 1361706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1359294-1359486:-1:exon

position:1359294:-1
position: 1359294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359486:-1
position: 1359486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1357973-1358092:-1:exon

position:1357973:-1
position: 1357973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358092:-1
position: 1358092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1357017-1357109:-1:exon

position:1357017:-1
position: 1357017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357109:-1
position: 1357109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1356461-1356595:-1:exon

position:1356461:-1
position: 1356461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356595:-1
position: 1356595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1355674-1355793:-1:exon

position:1355674:-1
position: 1355674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355793:-1
position: 1355793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1355206-1355298:-1:exon

position:1355206:-1
position: 1355206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355298:-1
position: 1355298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1354647-1354781:-1:exon

position:1354647:-1
position: 1354647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354781:-1
position: 1354781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1353732-1353846:-1:exon

position:1353732:-1
position: 1353732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353846:-1
position: 1353846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1353174-1353267:-1:exon

position:1353174:-1
position: 1353174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353267:-1
position: 1353267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1352845-1352926:-1:exon

position:1352845:-1
position: 1352845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1352926:-1
position: 1352926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1351467-1351600:-1:exon

position:1351467:-1
position: 1351467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1351600:-1
position: 1351600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1350890-1351055:-1:exon

position:1350890:-1
position: 1350890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1351055:-1
position: 1351055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1350647-1350740:-1:exon

position:1350647:-1
position: 1350647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350740:-1
position: 1350740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1349616-1349690:-1:exon

position:1349616:-1
position: 1349616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349690:-1
position: 1349690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1349042-1349165:-1:exon

position:1349042:-1
position: 1349042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349165:-1
position: 1349165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1348422-1348533:-1:exon

position:1348422:-1
position: 1348422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348533:-1
position: 1348533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1347668-1347748:-1:exon

position:1347668:-1
position: 1347668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347748:-1
position: 1347748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1347336-1347488:-1:exon

position:1347336:-1
position: 1347336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347488:-1
position: 1347488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1346760-1346813:-1:exon

position:1346760:-1
position: 1346760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346813:-1
position: 1346813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1346501-1346581:-1:exon

position:1346501:-1
position: 1346501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346581:-1
position: 1346581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1345670-1345940:-1:exon

position:1345940:-1
position: 1345940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPAG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SPAG5
product: sperm associated antigen 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034752787.1
SIO_010081: SPAG5
subclass of: SO_0000673
so part of: SPAG5
location: complement(join(1345670..1345940,1346501..1346581,1346760..1346813,1347336..1347488,1347668..1347748,1348422..1348533,1349042..1349165,1349616..1349690,1350647..1350740,1350890..1351055,1351467..1351600,1352845..1352926,1353174..1353267,1353732..1353846,1354647..1354781,1355206..1355298,1355674..1355793,1356461..1356595,1357017..1357109,1357973..1358092,1359294..1359486,1360472..1361706,1365462..1365507,1366759..1366870))
location: region:1345670-1366870:-1
so has part: feature:1366759-1366870:-1:exon
so has part: feature:1365462-1365507:-1:exon
so has part: feature:1360472-1361706:-1:exon
so has part: feature:1359294-1359486:-1:exon
so has part: feature:1357973-1358092:-1:exon
so has part: feature:1357017-1357109:-1:exon
so has part: feature:1356461-1356595:-1:exon
so has part: feature:1355674-1355793:-1:exon
so has part: feature:1355206-1355298:-1:exon
so has part: feature:1354647-1354781:-1:exon
so has part: feature:1353732-1353846:-1:exon
so has part: feature:1353174-1353267:-1:exon
so has part: feature:1352845-1352926:-1:exon
so has part: feature:1351467-1351600:-1:exon
so has part: feature:1350890-1351055:-1:exon
so has part: feature:1350647-1350740:-1:exon
so has part: feature:1349616-1349690:-1:exon
so has part: feature:1349042-1349165:-1:exon
so has part: feature:1348422-1348533:-1:exon
so has part: feature:1347668-1347748:-1:exon
so has part: feature:1347336-1347488:-1:exon
so has part: feature:1346760-1346813:-1:exon
so has part: feature:1346501-1346581:-1:exon
so has part: feature:1345670-1345940:-1:exon

position:1366870:-1
position: 1366870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366759-1366870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1365462-1365507:-1:exon

position:1365462:-1
position: 1365462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365507:-1
position: 1365507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1360472-1361706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1359294-1359486:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357973-1358092:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357017-1357109:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1356461-1356595:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1355674-1355793:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1355206-1355298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1354647-1354781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1353732-1353846:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1353174-1353267:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1352845-1352926:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1351467-1351600:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1350890-1351055:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1350647-1350740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1349616-1349690:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1349042-1349165:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1348422-1348533:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1347668-1347748:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1347336-1347488:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1346760-1346813:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1346501-1346581:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1345670-1345940:-1:exon

SPAG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SPAG5
product: sperm associated antigen 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034752788.1
SIO_010081: SPAG5
subclass of: SO_0000673
so part of: SPAG5
location: complement(join(1345670..1345940,1346501..1346581,1346760..1346813,1347336..1347488,1347668..1347748,1348422..1348533,1349042..1349165,1349616..1349690,1350647..1350740,1350890..1351055,1351467..1351600,1352845..1352926,1353174..1353267,1353732..1353846,1354647..1354781,1355206..1355298,1355674..1355793,1356461..1356595,1357017..1357109,1357973..1358092,1359294..1359486,1360472..1361706,1365462..1365551))
location: region:1345670-1365551:-1
so has part: feature:1365462-1365551:-1:exon
so has part: feature:1360472-1361706:-1:exon
so has part: feature:1359294-1359486:-1:exon
so has part: feature:1357973-1358092:-1:exon
so has part: feature:1357017-1357109:-1:exon
so has part: feature:1356461-1356595:-1:exon
so has part: feature:1355674-1355793:-1:exon
so has part: feature:1355206-1355298:-1:exon
so has part: feature:1354647-1354781:-1:exon
so has part: feature:1353732-1353846:-1:exon
so has part: feature:1353174-1353267:-1:exon
so has part: feature:1352845-1352926:-1:exon
so has part: feature:1351467-1351600:-1:exon
so has part: feature:1350890-1351055:-1:exon
so has part: feature:1350647-1350740:-1:exon
so has part: feature:1349616-1349690:-1:exon
so has part: feature:1349042-1349165:-1:exon
so has part: feature:1348422-1348533:-1:exon
so has part: feature:1347668-1347748:-1:exon
so has part: feature:1347336-1347488:-1:exon
so has part: feature:1346760-1346813:-1:exon
so has part: feature:1346501-1346581:-1:exon
so has part: feature:1345670-1345940:-1:exon

position:1365551:-1
position: 1365551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1365462-1365551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1360472-1361706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1359294-1359486:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357973-1358092:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357017-1357109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1356461-1356595:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1355674-1355793:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1355206-1355298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1354647-1354781:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1353732-1353846:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1353174-1353267:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1352845-1352926:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1351467-1351600:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1350890-1351055:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1350647-1350740:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1349616-1349690:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1349042-1349165:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1348422-1348533:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1347668-1347748:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1347336-1347488:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1346760-1346813:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1346501-1346581:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1345670-1345940:-1:exon

SPAG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SPAG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 5 isoform X1
translation: METAGPPAESAAAREPRKAAGRAPLQDLSLQQPPAAPPKPTFPGSRMEPVTCSSLTPLFRRLRLQDGRSTLPGSEMSPAIKIWADSLPSTMFSPKTVEEKKAWPNTQEQQLDLAPNSTTPKASEAAGSPQQMGQGESAISAGSLPGAESGEELWALPDNFGGRRADAADSSPLEREVEKDDADGPCAPETSQVSKVTVRMDEAHTHVTMAEHEPCLDSDPSDTRAIQDTAAELGVQEKQSHAAVAMVSLVPSLCSPERPGLLLVGSAEGCDPEQVSATQVLGSPPPSEEKGIWAVIPEPDSLEPPSSLATLKETEGHSSAMPIPGGAVSGSCPLPFVSDQPSLLVTEEGSPQASVWKDVASSSAQKPSLQGGAAALTTPVPSCEVGCNVAGTISWMTPLAWLEKNMGTSAVMESLRQSLPLPALQQDAGTSVTPVSACSAGTWMTPRALLEKSMNTSVEWPACAKDSAAETDSLLWHCSREHLSTLSRAELEGRLESTLIIIEALSCQLRDWQQNQWPVPRLGPADQRDVLTQTNVTHPKAEEQLYHDLYMATRERLKGLQRTREDERALKEELEEAREAMRSWTVESQSFLDTANTSLQNLQEDRGTLNQQQDQMRALLSRNRSSLDKVAAKLKSCLAERDEMRSRAAEALKAKDASDLVLEAFRVHASARLGALEQGLESQQELCTLIEEAREHQRSWTVESQSFLDTANTSLRNLQEDRGTLNQQQDQMRALLSRNRSSLDKVAAKLKSCLAERDEMRSRAAEALKAKDAAARELEVVSGRLEEVTAELQGSVAQVDQLTVANSRLGADLSTLLRDLASLQCERDELQETRADLSEETARLTREQELLQQQHDRVHQELREMTESREFIDQENRVSREQLTETENELRATLAVLRERSMQYEDLKDAYQHLQKERDTLCEELDCSKAEALGLQLIRDKLLKSSLELAQTKERLLDLTDVLQAALPGEAADAASWSRVCTPRSGPSSFVGSVLKAVAGKGIDEEAAGGSTAFTKVEPATPPMPAEIEESLQETVLELRAAVSHLITLSFQSQKAAQHKAQELQAKICDHQHQLESLESRLQAEIDARDANLAKLNKTLGVRFQTEKELQDIVRQQEEKMLQLIDRSGEVTSLKAEVSHLKHLLRRAETEAEVLWEEVRGREPDTTPLDADAVQEKVWLRQEVNKLRELLLETQRDYQDQRRILEGKLHHAQMVLRSREEMQEKIKEILSSIPDVVTAGSREVQNLLRYLGLKLADGDRCSGDAL
SIO_010081: SPAG5
subclass of: SO_0000673
so part of: SPAG5
location: complement(join(1345824..1345940,1346501..1346581,1346760..1346813,1347336..1347488,1347668..1347748,1348422..1348533,1349042..1349165,1349616..1349690,1350647..1350740,1350890..1351055,1351467..1351600,1352845..1352926,1353174..1353267,1353732..1353846,1354647..1354781,1355206..1355298,1355674..1355793,1356461..1356595,1357017..1357109,1357973..1358092,1359294..1359486,1360472..1361706,1366759..1366908,1367043..1367087))
location: region:1345824-1367087:-1
so has part: feature:1367043-1367087:-1:exon
so has part: feature:1366759-1366908:-1:exon
so has part: feature:1360472-1361706:-1:exon
so has part: feature:1359294-1359486:-1:exon
so has part: feature:1357973-1358092:-1:exon
so has part: feature:1357017-1357109:-1:exon
so has part: feature:1356461-1356595:-1:exon
so has part: feature:1355674-1355793:-1:exon
so has part: feature:1355206-1355298:-1:exon
so has part: feature:1354647-1354781:-1:exon
so has part: feature:1353732-1353846:-1:exon
so has part: feature:1353174-1353267:-1:exon
so has part: feature:1352845-1352926:-1:exon
so has part: feature:1351467-1351600:-1:exon
so has part: feature:1350890-1351055:-1:exon
so has part: feature:1350647-1350740:-1:exon
so has part: feature:1349616-1349690:-1:exon
so has part: feature:1349042-1349165:-1:exon
so has part: feature:1348422-1348533:-1:exon
so has part: feature:1347668-1347748:-1:exon
so has part: feature:1347336-1347488:-1:exon
so has part: feature:1346760-1346813:-1:exon
so has part: feature:1346501-1346581:-1:exon
so has part: feature:1345824-1345940:-1:exon

XP_034608677.1
type: Protein
SIO_000068: ncbiprotein

position:1345824:-1
position: 1345824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367087:-1
position: 1367087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367043-1367087:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1366759-1366908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1360472-1361706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1359294-1359486:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357973-1358092:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357017-1357109:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1356461-1356595:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1355674-1355793:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1355206-1355298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1354647-1354781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1353732-1353846:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1353174-1353267:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1352845-1352926:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1351467-1351600:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1350890-1351055:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1350647-1350740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1349616-1349690:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1349042-1349165:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1348422-1348533:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1347668-1347748:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1347336-1347488:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1346760-1346813:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1346501-1346581:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1345824-1345940:-1:exon

SPAG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SPAG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 5 isoform X2
translation: MSPAIKIWADSLPSTMFSPKTVEEKKAWPNTQEQQLDLAPNSTTPKASEAAGSPQQMGQGESAISAGSLPGAESGEELWALPDNFGGRRADAADSSPLEREVEKDDADGPCAPETSQVSKVTVRMDEAHTHVTMAEHEPCLDSDPSDTRAIQDTAAELGVQEKQSHAAVAMVSLVPSLCSPERPGLLLVGSAEGCDPEQVSATQVLGSPPPSEEKGIWAVIPEPDSLEPPSSLATLKETEGHSSAMPIPGGAVSGSCPLPFVSDQPSLLVTEEGSPQASVWKDVASSSAQKPSLQGGAAALTTPVPSCEVGCNVAGTISWMTPLAWLEKNMGTSAVMESLRQSLPLPALQQDAGTSVTPVSACSAGTWMTPRALLEKSMNTSVEWPACAKDSAAETDSLLWHCSREHLSTLSRAELEGRLESTLIIIEALSCQLRDWQQNQWPVPRLGPADQRDVLTQTNVTHPKAEEQLYHDLYMATRERLKGLQRTREDERALKEELEEAREAMRSWTVESQSFLDTANTSLQNLQEDRGTLNQQQDQMRALLSRNRSSLDKVAAKLKSCLAERDEMRSRAAEALKAKDASDLVLEAFRVHASARLGALEQGLESQQELCTLIEEAREHQRSWTVESQSFLDTANTSLRNLQEDRGTLNQQQDQMRALLSRNRSSLDKVAAKLKSCLAERDEMRSRAAEALKAKDAAARELEVVSGRLEEVTAELQGSVAQVDQLTVANSRLGADLSTLLRDLASLQCERDELQETRADLSEETARLTREQELLQQQHDRVHQELREMTESREFIDQENRVSREQLTETENELRATLAVLRERSMQYEDLKDAYQHLQKERDTLCEELDCSKAEALGLQLIRDKLLKSSLELAQTKERLLDLTDVLQAALPGEAADAASWSRVCTPRSGPSSFVGSVLKAVAGKGIDEEAAGGSTAFTKVEPATPPMPAEIEESLQETVLELRAAVSHLITLSFQSQKAAQHKAQELQAKICDHQHQLESLESRLQAEIDARDANLAKLNKTLGVRFQTEKELQDIVRQQEEKMLQLIDRSGEVTSLKAEVSHLKHLLRRAETEAEVLWEEVRGREPDTTPLDADAVQEKVWLRQEVNKLRELLLETQRDYQDQRRILEGKLHHAQMVLRSREEMQEKIKEILSSIPDVVTAGSREVQNLLRYLGLKLADGDRCSGDAL
SIO_010081: SPAG5
subclass of: SO_0000673
so part of: SPAG5
location: complement(join(1345824..1345940,1346501..1346581,1346760..1346813,1347336..1347488,1347668..1347748,1348422..1348533,1349042..1349165,1349616..1349690,1350647..1350740,1350890..1351055,1351467..1351600,1352845..1352926,1353174..1353267,1353732..1353846,1354647..1354781,1355206..1355298,1355674..1355793,1356461..1356595,1357017..1357109,1357973..1358092,1359294..1359486,1360472..1361676))
location: region:1345824-1361676:-1
so has part: feature:1360472-1361676:-1:exon
so has part: feature:1359294-1359486:-1:exon
so has part: feature:1357973-1358092:-1:exon
so has part: feature:1357017-1357109:-1:exon
so has part: feature:1356461-1356595:-1:exon
so has part: feature:1355674-1355793:-1:exon
so has part: feature:1355206-1355298:-1:exon
so has part: feature:1354647-1354781:-1:exon
so has part: feature:1353732-1353846:-1:exon
so has part: feature:1353174-1353267:-1:exon
so has part: feature:1352845-1352926:-1:exon
so has part: feature:1351467-1351600:-1:exon
so has part: feature:1350890-1351055:-1:exon
so has part: feature:1350647-1350740:-1:exon
so has part: feature:1349616-1349690:-1:exon
so has part: feature:1349042-1349165:-1:exon
so has part: feature:1348422-1348533:-1:exon
so has part: feature:1347668-1347748:-1:exon
so has part: feature:1347336-1347488:-1:exon
so has part: feature:1346760-1346813:-1:exon
so has part: feature:1346501-1346581:-1:exon
so has part: feature:1345824-1345940:-1:exon

XP_034608678.1
type: Protein
SIO_000068: ncbiprotein

position:1361676:-1
position: 1361676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1360472-1361676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1359294-1359486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357973-1358092:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357017-1357109:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1356461-1356595:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1355674-1355793:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1355206-1355298:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1354647-1354781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1353732-1353846:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1353174-1353267:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1352845-1352926:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1351467-1351600:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1350890-1351055:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1350647-1350740:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1349616-1349690:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1349042-1349165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1348422-1348533:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1347668-1347748:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1347336-1347488:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1346760-1346813:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1346501-1346581:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1345824-1345940:-1:exon

SPAG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SPAG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 5 isoform X2
translation: MSPAIKIWADSLPSTMFSPKTVEEKKAWPNTQEQQLDLAPNSTTPKASEAAGSPQQMGQGESAISAGSLPGAESGEELWALPDNFGGRRADAADSSPLEREVEKDDADGPCAPETSQVSKVTVRMDEAHTHVTMAEHEPCLDSDPSDTRAIQDTAAELGVQEKQSHAAVAMVSLVPSLCSPERPGLLLVGSAEGCDPEQVSATQVLGSPPPSEEKGIWAVIPEPDSLEPPSSLATLKETEGHSSAMPIPGGAVSGSCPLPFVSDQPSLLVTEEGSPQASVWKDVASSSAQKPSLQGGAAALTTPVPSCEVGCNVAGTISWMTPLAWLEKNMGTSAVMESLRQSLPLPALQQDAGTSVTPVSACSAGTWMTPRALLEKSMNTSVEWPACAKDSAAETDSLLWHCSREHLSTLSRAELEGRLESTLIIIEALSCQLRDWQQNQWPVPRLGPADQRDVLTQTNVTHPKAEEQLYHDLYMATRERLKGLQRTREDERALKEELEEAREAMRSWTVESQSFLDTANTSLQNLQEDRGTLNQQQDQMRALLSRNRSSLDKVAAKLKSCLAERDEMRSRAAEALKAKDASDLVLEAFRVHASARLGALEQGLESQQELCTLIEEAREHQRSWTVESQSFLDTANTSLRNLQEDRGTLNQQQDQMRALLSRNRSSLDKVAAKLKSCLAERDEMRSRAAEALKAKDAAARELEVVSGRLEEVTAELQGSVAQVDQLTVANSRLGADLSTLLRDLASLQCERDELQETRADLSEETARLTREQELLQQQHDRVHQELREMTESREFIDQENRVSREQLTETENELRATLAVLRERSMQYEDLKDAYQHLQKERDTLCEELDCSKAEALGLQLIRDKLLKSSLELAQTKERLLDLTDVLQAALPGEAADAASWSRVCTPRSGPSSFVGSVLKAVAGKGIDEEAAGGSTAFTKVEPATPPMPAEIEESLQETVLELRAAVSHLITLSFQSQKAAQHKAQELQAKICDHQHQLESLESRLQAEIDARDANLAKLNKTLGVRFQTEKELQDIVRQQEEKMLQLIDRSGEVTSLKAEVSHLKHLLRRAETEAEVLWEEVRGREPDTTPLDADAVQEKVWLRQEVNKLRELLLETQRDYQDQRRILEGKLHHAQMVLRSREEMQEKIKEILSSIPDVVTAGSREVQNLLRYLGLKLADGDRCSGDAL
SIO_010081: SPAG5
subclass of: SO_0000673
so part of: SPAG5
location: complement(join(1345824..1345940,1346501..1346581,1346760..1346813,1347336..1347488,1347668..1347748,1348422..1348533,1349042..1349165,1349616..1349690,1350647..1350740,1350890..1351055,1351467..1351600,1352845..1352926,1353174..1353267,1353732..1353846,1354647..1354781,1355206..1355298,1355674..1355793,1356461..1356595,1357017..1357109,1357973..1358092,1359294..1359486,1360472..1361676))
location: region:1345824-1361676:-1
so has part: feature:1360472-1361676:-1:exon
so has part: feature:1359294-1359486:-1:exon
so has part: feature:1357973-1358092:-1:exon
so has part: feature:1357017-1357109:-1:exon
so has part: feature:1356461-1356595:-1:exon
so has part: feature:1355674-1355793:-1:exon
so has part: feature:1355206-1355298:-1:exon
so has part: feature:1354647-1354781:-1:exon
so has part: feature:1353732-1353846:-1:exon
so has part: feature:1353174-1353267:-1:exon
so has part: feature:1352845-1352926:-1:exon
so has part: feature:1351467-1351600:-1:exon
so has part: feature:1350890-1351055:-1:exon
so has part: feature:1350647-1350740:-1:exon
so has part: feature:1349616-1349690:-1:exon
so has part: feature:1349042-1349165:-1:exon
so has part: feature:1348422-1348533:-1:exon
so has part: feature:1347668-1347748:-1:exon
so has part: feature:1347336-1347488:-1:exon
so has part: feature:1346760-1346813:-1:exon
so has part: feature:1346501-1346581:-1:exon
so has part: feature:1345824-1345940:-1:exon

XP_034608679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1360472-1361676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1359294-1359486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357973-1358092:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357017-1357109:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1356461-1356595:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1355674-1355793:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1355206-1355298:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1354647-1354781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1353732-1353846:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1353174-1353267:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1352845-1352926:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1351467-1351600:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1350890-1351055:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1350647-1350740:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1349616-1349690:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1349042-1349165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1348422-1348533:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1347668-1347748:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1347336-1347488:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1346760-1346813:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1346501-1346581:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1345824-1345940:-1:exon

RSKR
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: RSKR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1367510..>1369113)
location: region:1367510-1369113:-1
so has part: feature:1367510-1369113:-1:exon
subclass of: SO_0000010

117867664
type: Gene
SIO_000068: ncbigene

position:1367510:-1
position: 1367510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1369113:-1
position: 1369113
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367510-1369113:-1:exon

RSKR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: RSKR
product: ribosomal protein S6 kinase related
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_034752876.1
SIO_010081: RSKR
subclass of: SO_0000673
so part of: RSKR
location: complement(join(1367510..1367975,1368105..1368215,1368831..1368919,1369002..>1369113))
location: region:1367510-1369113:-1
so has part: feature:1369002-1369113:-1:exon
so has part: feature:1368831-1368919:-1:exon
so has part: feature:1368105-1368215:-1:exon
so has part: feature:1367510-1367975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1369002-1369113:-1:exon

position:1369002:-1
position: 1369002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1368831-1368919:-1:exon

position:1368831:-1
position: 1368831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368919:-1
position: 1368919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1368105-1368215:-1:exon

position:1368105:-1
position: 1368105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368215:-1
position: 1368215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1367510-1367975:-1:exon

position:1367975:-1
position: 1367975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RSKR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: RSKR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase-related protein
translation: YSVCLFTGHLKLTDFGLSRHLRRGERAYTICGTLQYMAPEVLSGGPYSHSADWWSLGILLFTLATGKFPVPPERDHLAMLASVNRCSYESPGSLSRGLSLLLSELLCRNPLRRLRYLHHFKSHLFFRGVTFDAELLQKHPVDVVVAARQAEAAALESSVTFTDFDCDLLAWLRPS
SIO_010081: RSKR
subclass of: SO_0000673
so part of: RSKR
location: complement(join(1367760..1367975,1368105..1368215,1368831..1368919,1369002..>1369113))
location: region:1367760-1369113:-1
so has part: feature:1369002-1369113:-1:exon
so has part: feature:1368831-1368919:-1:exon
so has part: feature:1368105-1368215:-1:exon
so has part: feature:1367760-1367975:-1:exon

XP_034608767.1
type: Protein
SIO_000068: ncbiprotein

position:1367760:-1
position: 1367760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1369002-1369113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1368831-1368919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368105-1368215:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1367760-1367975:-1:exon

SUPT6H
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SUPT6H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1417609..1449942
location: region:1417609-1449942:1
so has part: feature:1417609-1449942:1:exon
subclass of: SO_0000010

117867414
type: Gene
SIO_000068: ncbigene

position:1417609:1
position: 1417609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1449942:1
position: 1449942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417609-1449942:1:exon

SUPT6H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SUPT6H
product: SPT6 homolog, histone chaperone and transcription elongation factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_034752415.1
SIO_010081: SUPT6H
subclass of: SO_0000673
so part of: SUPT6H
location: join(1417609..1417767,1418861..1419019,1419226..1419296,1419725..1419920,1420626..1420710,1421565..1421838,1423095..1423196,1423789..1423905,1424437..1424526,1425090..1425232,1425561..1425712,1426591..1426689,1428544..1428673,1428765..1428915,1429871..1430025,1431000..1431195,1431956..1432095,1432179..1432296,1433141..1433217,1434031..1434166,1434701..1434838,1435166..1435333,1435921..1436048,1437238..1437445,1437575..1437722,1438034..1438176,1439445..1439585,1440805..1441000,1441142..1441380,1442553..1442666,1443357..1443481,1444001..1444113,1445860..1445937,1446051..1446217,1447161..1447339,1448090..1449942)
location: region:1417609-1449942:1
so has part: feature:1417609-1417767:1:exon
so has part: feature:1418861-1419019:1:exon
so has part: feature:1419226-1419296:1:exon
so has part: feature:1419725-1419920:1:exon
so has part: feature:1420626-1420710:1:exon
so has part: feature:1421565-1421838:1:exon
so has part: feature:1423095-1423196:1:exon
so has part: feature:1423789-1423905:1:exon
so has part: feature:1424437-1424526:1:exon
so has part: feature:1425090-1425232:1:exon
so has part: feature:1425561-1425712:1:exon
so has part: feature:1426591-1426689:1:exon
so has part: feature:1428544-1428673:1:exon
so has part: feature:1428765-1428915:1:exon
so has part: feature:1429871-1430025:1:exon
so has part: feature:1431000-1431195:1:exon
so has part: feature:1431956-1432095:1:exon
so has part: feature:1432179-1432296:1:exon
so has part: feature:1433141-1433217:1:exon
so has part: feature:1434031-1434166:1:exon
so has part: feature:1434701-1434838:1:exon
so has part: feature:1435166-1435333:1:exon
so has part: feature:1435921-1436048:1:exon
so has part: feature:1437238-1437445:1:exon
so has part: feature:1437575-1437722:1:exon
so has part: feature:1438034-1438176:1:exon
so has part: feature:1439445-1439585:1:exon
so has part: feature:1440805-1441000:1:exon
so has part: feature:1441142-1441380:1:exon
so has part: feature:1442553-1442666:1:exon
so has part: feature:1443357-1443481:1:exon
so has part: feature:1444001-1444113:1:exon
so has part: feature:1445860-1445937:1:exon
so has part: feature:1446051-1446217:1:exon
so has part: feature:1447161-1447339:1:exon
so has part: feature:1448090-1449942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1417609-1417767:1:exon

position:1417767:1
position: 1417767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1418861-1419019:1:exon

position:1418861:1
position: 1418861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419019:1
position: 1419019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1419226-1419296:1:exon

position:1419226:1
position: 1419226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419296:1
position: 1419296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1419725-1419920:1:exon

position:1419725:1
position: 1419725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419920:1
position: 1419920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1420626-1420710:1:exon

position:1420626:1
position: 1420626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1420710:1
position: 1420710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1421565-1421838:1:exon

position:1421565:1
position: 1421565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421838:1
position: 1421838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1423095-1423196:1:exon

position:1423095:1
position: 1423095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423196:1
position: 1423196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1423789-1423905:1:exon

position:1423789:1
position: 1423789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423905:1
position: 1423905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1424437-1424526:1:exon

position:1424437:1
position: 1424437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424526:1
position: 1424526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1425090-1425232:1:exon

position:1425090:1
position: 1425090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425232:1
position: 1425232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1425561-1425712:1:exon

position:1425561:1
position: 1425561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425712:1
position: 1425712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1426591-1426689:1:exon

position:1426591:1
position: 1426591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426689:1
position: 1426689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1428544-1428673:1:exon

position:1428544:1
position: 1428544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428673:1
position: 1428673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1428765-1428915:1:exon

position:1428765:1
position: 1428765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428915:1
position: 1428915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1429871-1430025:1:exon

position:1429871:1
position: 1429871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430025:1
position: 1430025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1431000-1431195:1:exon

position:1431000:1
position: 1431000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431195:1
position: 1431195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1431956-1432095:1:exon

position:1431956:1
position: 1431956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432095:1
position: 1432095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1432179-1432296:1:exon

position:1432179:1
position: 1432179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432296:1
position: 1432296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1433141-1433217:1:exon

position:1433141:1
position: 1433141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1433217:1
position: 1433217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1434031-1434166:1:exon

position:1434031:1
position: 1434031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434166:1
position: 1434166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1434701-1434838:1:exon

position:1434701:1
position: 1434701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434838:1
position: 1434838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1435166-1435333:1:exon

position:1435166:1
position: 1435166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1435333:1
position: 1435333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1435921-1436048:1:exon

position:1435921:1
position: 1435921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436048:1
position: 1436048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1437238-1437445:1:exon

position:1437238:1
position: 1437238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437445:1
position: 1437445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1437575-1437722:1:exon

position:1437575:1
position: 1437575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437722:1
position: 1437722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1438034-1438176:1:exon

position:1438034:1
position: 1438034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438176:1
position: 1438176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1439445-1439585:1:exon

position:1439445:1
position: 1439445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439585:1
position: 1439585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1440805-1441000:1:exon

position:1440805:1
position: 1440805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441000:1
position: 1441000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1441142-1441380:1:exon

position:1441142:1
position: 1441142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441380:1
position: 1441380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1442553-1442666:1:exon

position:1442553:1
position: 1442553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1442666:1
position: 1442666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1443357-1443481:1:exon

position:1443357:1
position: 1443357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443481:1
position: 1443481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1444001-1444113:1:exon

position:1444001:1
position: 1444001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444113:1
position: 1444113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1445860-1445937:1:exon

position:1445860:1
position: 1445860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445937:1
position: 1445937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1446051-1446217:1:exon

position:1446051:1
position: 1446051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446217:1
position: 1446217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1447161-1447339:1:exon

position:1447161:1
position: 1447161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447339:1
position: 1447339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1448090-1449942:1:exon

position:1448090:1
position: 1448090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUPT6H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SUPT6H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor SPT6
translation: MSDFVESEAEESEEEYNDDGEVVPRANKKFVEEEDDEEEEEENLDDQDEQGNLKGFINDDDDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVDAPIAPPEEEEEDEEDESDIDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEYEYEDEEAEGEIRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRVTDMPERFQLRSIPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKEALNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKASRKKHKRIREDGEEAEGEGEDAEDEEQKGPELKQASRRDMYTICQTAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPLVRQVLRQTFQERAKLNIAPTKKGKKDVDEAHYAYSCKYLKNKPVKELRDDQFLKICLAEEEGLLSIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFLYVQMAKELKNKLMVEAKEYVIKACSRKLYNWLKVSPYRPDQQVEEDDDFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEERDKKAQDIETLKKFLLNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSRKSENEFRDYPPVLRQAVSLARRIQDPLIEFSQVCSSDEDILCLKLHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPYRSPNTEEVFNMLTKETPETFYIGKMITCNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDAEAADHKQEEDYKRKQQRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHVDVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLSHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSYSYTTPSQPITTPQYHQLQASTTPQSTQSQPSSSSRQRQQPKSNSHAAIDWGKMAEQWLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
SIO_010081: SUPT6H
subclass of: SO_0000673
so part of: SUPT6H
location: join(1417662..1417767,1418861..1419019,1419226..1419296,1419725..1419920,1420626..1420710,1421565..1421838,1423095..1423196,1423789..1423905,1424437..1424526,1425090..1425232,1425561..1425712,1426591..1426689,1428544..1428673,1428765..1428915,1429871..1430025,1431000..1431195,1431956..1432095,1432179..1432296,1433141..1433217,1434031..1434166,1434701..1434838,1435166..1435333,1435921..1436048,1437238..1437445,1437575..1437722,1438034..1438176,1439445..1439585,1440805..1441000,1441142..1441380,1442553..1442666,1443357..1443481,1444001..1444113,1445860..1445937,1446051..1446217,1447161..1447339,1448090..1448276)
location: region:1417662-1448276:1
so has part: feature:1417662-1417767:1:exon
so has part: feature:1418861-1419019:1:exon
so has part: feature:1419226-1419296:1:exon
so has part: feature:1419725-1419920:1:exon
so has part: feature:1420626-1420710:1:exon
so has part: feature:1421565-1421838:1:exon
so has part: feature:1423095-1423196:1:exon
so has part: feature:1423789-1423905:1:exon
so has part: feature:1424437-1424526:1:exon
so has part: feature:1425090-1425232:1:exon
so has part: feature:1425561-1425712:1:exon
so has part: feature:1426591-1426689:1:exon
so has part: feature:1428544-1428673:1:exon
so has part: feature:1428765-1428915:1:exon
so has part: feature:1429871-1430025:1:exon
so has part: feature:1431000-1431195:1:exon
so has part: feature:1431956-1432095:1:exon
so has part: feature:1432179-1432296:1:exon
so has part: feature:1433141-1433217:1:exon
so has part: feature:1434031-1434166:1:exon
so has part: feature:1434701-1434838:1:exon
so has part: feature:1435166-1435333:1:exon
so has part: feature:1435921-1436048:1:exon
so has part: feature:1437238-1437445:1:exon
so has part: feature:1437575-1437722:1:exon
so has part: feature:1438034-1438176:1:exon
so has part: feature:1439445-1439585:1:exon
so has part: feature:1440805-1441000:1:exon
so has part: feature:1441142-1441380:1:exon
so has part: feature:1442553-1442666:1:exon
so has part: feature:1443357-1443481:1:exon
so has part: feature:1444001-1444113:1:exon
so has part: feature:1445860-1445937:1:exon
so has part: feature:1446051-1446217:1:exon
so has part: feature:1447161-1447339:1:exon
so has part: feature:1448090-1448276:1:exon

XP_034608306.1
type: Protein
SIO_000068: ncbiprotein

position:1417662:1
position: 1417662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1448276:1
position: 1448276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417662-1417767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1418861-1419019:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419226-1419296:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1419725-1419920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1420626-1420710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1421565-1421838:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1423095-1423196:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1423789-1423905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1424437-1424526:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1425090-1425232:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1425561-1425712:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1426591-1426689:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1428544-1428673:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1428765-1428915:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1429871-1430025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1431000-1431195:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1431956-1432095:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1432179-1432296:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1433141-1433217:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1434031-1434166:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1434701-1434838:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1435166-1435333:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1435921-1436048:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1437238-1437445:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1437575-1437722:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1438034-1438176:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1439445-1439585:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1440805-1441000:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1441142-1441380:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1442553-1442666:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1443357-1443481:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1444001-1444113:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1445860-1445937:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1446051-1446217:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1447161-1447339:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1448090-1448276:1:exon

PROCA1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: PROCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1452942..>1454997)
location: region:1452942-1454997:-1
so has part: feature:1452942-1454997:-1:exon
subclass of: SO_0000010

117867298
type: Gene
SIO_000068: ncbigene

position:1452942:-1
position: 1452942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454997:-1
position: 1454997
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1452942-1454997:-1:exon

PROCA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PROCA1
product: protein interacting with cyclin A1
inference: similar to RNA sequence, mRNA (same species):INSD:JW341298.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 181 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034752175.1
SIO_010081: PROCA1
subclass of: SO_0000673
so part of: PROCA1
location: complement(join(1452942..1453691,1453782..1453916,1454865..>1454997))
location: region:1452942-1454997:-1
so has part: feature:1454865-1454997:-1:exon
so has part: feature:1453782-1453916:-1:exon
so has part: feature:1452942-1453691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1454865-1454997:-1:exon

position:1454865:-1
position: 1454865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1453782-1453916:-1:exon

position:1453782:-1
position: 1453782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1453916:-1
position: 1453916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1452942-1453691:-1:exon

position:1453691:-1
position: 1453691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PROCA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PROCA1
inference: similar to RNA sequence, mRNA (same species):INSD:JW341298.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 181 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: protein PROCA1
translation: VRSPDSGGQQPLGATWAPGPGQGRPEPAGGAARRRTKRGFTYPGTLWCGAGNNADSYGQLGEHRETDECCREHDHCQHVIHPFTAKYGYRNLRWHTISHCACDLRLKGCLRQVNDTASRVVGQAFFNVIQVPCFEFTYKEQCVEPYLYIWCKKYNTVAIAVPRKPVLYEFGGELIDEVAAGSDRAPSGPAPQPGTPPPRESTGRWALPPTKPPPPGQLVTGAMDSFQKSAPTGPKRESPATTQRKGKGKKRGRKTKKGKGLKKKKVHPKAEVLGLPTPTADTASLLPKHLVLDFGRKEDVFNAILNDAPVGEETLTPRGAAQAESRDRGQLKARPLPTLQPTCPAASKRKRRRERNGRKRPRKEAESLPRPV
SIO_010081: PROCA1
subclass of: SO_0000673
so part of: PROCA1
location: complement(join(1453022..1453691,1453782..1453916,1454865..>1454997))
location: region:1453022-1454997:-1
so has part: feature:1454865-1454997:-1:exon
so has part: feature:1453782-1453916:-1:exon
so has part: feature:1453022-1453691:-1:exon

XP_034608066.1
type: Protein
SIO_000068: ncbiprotein

position:1453022:-1
position: 1453022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1454865-1454997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1453782-1453916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1453022-1453691:-1:exon

LOC117867576
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117867576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1469779..1476012
location: region:1469779-1476012:1
so has part: feature:1469779-1476012:1:exon
subclass of: SO_0000010

117867576
type: Gene
SIO_000068: ncbigene

position:1469779:1
position: 1469779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1476012:1
position: 1476012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1469779-1476012:1:exon

LOC117867576
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117867576
product: adenine phosphoribosyltransferase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_034752753.1
SIO_010081: LOC117867576
subclass of: SO_0000673
so part of: LOC117867576
location: join(1469779..1469918,1470911..1471068,1471775..1471868,1472127..1472273,1472629..1472724,1475060..1476012)
location: region:1469779-1476012:1
so has part: feature:1469779-1469918:1:exon
so has part: feature:1470911-1471068:1:exon
so has part: feature:1471775-1471868:1:exon
so has part: feature:1472127-1472273:1:exon
so has part: feature:1472629-1472724:1:exon
so has part: feature:1475060-1476012:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1469779-1469918:1:exon

position:1469918:1
position: 1469918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1470911-1471068:1:exon

position:1470911:1
position: 1470911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471068:1
position: 1471068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1471775-1471868:1:exon

position:1471775:1
position: 1471775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471868:1
position: 1471868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1472127-1472273:1:exon

position:1472127:1
position: 1472127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472273:1
position: 1472273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1472629-1472724:1:exon

position:1472629:1
position: 1472629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472724:1
position: 1472724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1475060-1476012:1:exon

position:1475060:1
position: 1475060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117867576
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117867576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenine phosphoribosyltransferase-like
translation: MDLRRVPASRETGWYLALMAPNVKGPSYAWLDPSRLYCHRQGLQDCIADLLQPFCEDPIDLVAGIDAMGFILGAAIASTLQKGFLAIRKAGHLCVETCTQPYTDYSARQKLLEMRTDAIQPGLRVLLVDQWIETGGTMRAAIQLVEQQGGVIAGIAAICIEDSEGGKWIQEHYKCSQCVPQHLMPQFNRHQLESFQAFGTTPGQA
SIO_010081: LOC117867576
subclass of: SO_0000673
so part of: LOC117867576
location: join(1470946..1471068,1471775..1471868,1472127..1472273,1472629..1472724,1475060..1475217)
location: region:1470946-1475217:1
so has part: feature:1470946-1471068:1:exon
so has part: feature:1471775-1471868:1:exon
so has part: feature:1472127-1472273:1:exon
so has part: feature:1472629-1472724:1:exon
so has part: feature:1475060-1475217:1:exon

XP_034608644.1
type: Protein
SIO_000068: ncbiprotein

position:1470946:1
position: 1470946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1475217:1
position: 1475217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1470946-1471068:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471775-1471868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1472127-1472273:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1472629-1472724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1475060-1475217:1:exon

RAB34
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: RAB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1475923..1485830)
location: region:1475923-1485830:-1
so has part: feature:1475923-1485830:-1:exon
subclass of: SO_0000010

117867575
type: Gene
SIO_000068: ncbigene

position:1475923:-1
position: 1475923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485830:-1
position: 1485830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1475923-1485830:-1:exon

RAB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: RAB34
product: RAB34, member RAS oncogene family, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_034752750.1
SIO_010081: RAB34
subclass of: SO_0000673
so part of: RAB34
location: complement(join(1475923..1476728,1477091..1477198,1477612..1477702,1477962..1478043,1478638..1478689,1479000..1479064,1479138..1479239,1479974..1480042,1482305..1482396,1482891..1482987,1485313..1485830))
location: region:1475923-1485830:-1
so has part: feature:1485313-1485830:-1:exon
so has part: feature:1482891-1482987:-1:exon
so has part: feature:1482305-1482396:-1:exon
so has part: feature:1479974-1480042:-1:exon
so has part: feature:1479138-1479239:-1:exon
so has part: feature:1479000-1479064:-1:exon
so has part: feature:1478638-1478689:-1:exon
so has part: feature:1477962-1478043:-1:exon
so has part: feature:1477612-1477702:-1:exon
so has part: feature:1477091-1477198:-1:exon
so has part: feature:1475923-1476728:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1485313-1485830:-1:exon

position:1485313:-1
position: 1485313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1482891-1482987:-1:exon

position:1482891:-1
position: 1482891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1482987:-1
position: 1482987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1482305-1482396:-1:exon

position:1482305:-1
position: 1482305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1482396:-1
position: 1482396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1479974-1480042:-1:exon

position:1479974:-1
position: 1479974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480042:-1
position: 1480042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1479138-1479239:-1:exon

position:1479138:-1
position: 1479138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479239:-1
position: 1479239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1479000-1479064:-1:exon

position:1479000:-1
position: 1479000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479064:-1
position: 1479064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1478638-1478689:-1:exon

position:1478638:-1
position: 1478638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1478689:-1
position: 1478689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1477962-1478043:-1:exon

position:1477962:-1
position: 1477962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1478043:-1
position: 1478043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1477612-1477702:-1:exon

position:1477612:-1
position: 1477612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1477702:-1
position: 1477702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1477091-1477198:-1:exon

position:1477091:-1
position: 1477091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1477198:-1
position: 1477198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1475923-1476728:-1:exon

position:1476728:-1
position: 1476728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: RAB34
product: RAB34, member RAS oncogene family, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_034752747.1
SIO_010081: RAB34
subclass of: SO_0000673
so part of: RAB34
location: complement(join(1475923..1476728,1477091..1477198,1477612..1477702,1477962..1478043,1478638..1478689,1479000..1479064,1479138..1479239,1479974..1480042,1482305..1482396,1482891..1483053,1485313..1485828))
location: region:1475923-1485828:-1
so has part: feature:1485313-1485828:-1:exon
so has part: feature:1482891-1483053:-1:exon
so has part: feature:1482305-1482396:-1:exon
so has part: feature:1479974-1480042:-1:exon
so has part: feature:1479138-1479239:-1:exon
so has part: feature:1479000-1479064:-1:exon
so has part: feature:1478638-1478689:-1:exon
so has part: feature:1477962-1478043:-1:exon
so has part: feature:1477612-1477702:-1:exon
so has part: feature:1477091-1477198:-1:exon
so has part: feature:1475923-1476728:-1:exon

position:1485828:-1
position: 1485828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1485313-1485828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1482891-1483053:-1:exon

position:1483053:-1
position: 1483053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1482305-1482396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1479974-1480042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1479138-1479239:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1479000-1479064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1478638-1478689:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1477962-1478043:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1477612-1477702:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1477091-1477198:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1475923-1476728:-1:exon

RAB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: RAB34
product: RAB34, member RAS oncogene family, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_034752752.1
SIO_010081: RAB34
subclass of: SO_0000673
so part of: RAB34
location: complement(join(1475923..1476728,1477091..1477198,1477612..1477702,1477962..1478043,1478638..1478689,1479000..1479064,1479138..1479239,1479974..1480039,1482305..1482396,1482891..1483053,1485313..1485826))
location: region:1475923-1485826:-1
so has part: feature:1485313-1485826:-1:exon
so has part: feature:1482891-1483053:-1:exon
so has part: feature:1482305-1482396:-1:exon
so has part: feature:1479974-1480039:-1:exon
so has part: feature:1479138-1479239:-1:exon
so has part: feature:1479000-1479064:-1:exon
so has part: feature:1478638-1478689:-1:exon
so has part: feature:1477962-1478043:-1:exon
so has part: feature:1477612-1477702:-1:exon
so has part: feature:1477091-1477198:-1:exon
so has part: feature:1475923-1476728:-1:exon

position:1485826:-1
position: 1485826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1485313-1485826:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1482891-1483053:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1482305-1482396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1479974-1480039:-1:exon

position:1480039:-1
position: 1480039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1479138-1479239:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1479000-1479064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1478638-1478689:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1477962-1478043:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1477612-1477702:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1477091-1477198:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1475923-1476728:-1:exon

RAB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: RAB34
product: RAB34, member RAS oncogene family, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034752751.1
SIO_010081: RAB34
subclass of: SO_0000673
so part of: RAB34
location: complement(join(1475923..1476728,1477091..1477198,1477612..1477702,1477962..1478043,1478638..1478689,1479000..1479064,1479138..1479239,1479974..1480042,1482305..1482396,1482891..1482987,1484812..1484942))
location: region:1475923-1484942:-1
so has part: feature:1484812-1484942:-1:exon
so has part: feature:1482891-1482987:-1:exon
so has part: feature:1482305-1482396:-1:exon
so has part: feature:1479974-1480042:-1:exon
so has part: feature:1479138-1479239:-1:exon
so has part: feature:1479000-1479064:-1:exon
so has part: feature:1478638-1478689:-1:exon
so has part: feature:1477962-1478043:-1:exon
so has part: feature:1477612-1477702:-1:exon
so has part: feature:1477091-1477198:-1:exon
so has part: feature:1475923-1476728:-1:exon

position:1484942:-1
position: 1484942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1484812-1484942:-1:exon

position:1484812:-1
position: 1484812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1482891-1482987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1482305-1482396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1479974-1480042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1479138-1479239:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1479000-1479064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1478638-1478689:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1477962-1478043:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1477612-1477702:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1477091-1477198:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1475923-1476728:-1:exon

RAB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: RAB34
product: RAB34, member RAS oncogene family, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_034752749.1
SIO_010081: RAB34
subclass of: SO_0000673
so part of: RAB34
location: complement(join(1475923..1476728,1477091..1477198,1477612..1477702,1477962..1478043,1478638..1478689,1479000..1479064,1479138..1479239,1479974..1480042,1482305..1482396,1482891..1483053,1484812..1484941))
location: region:1475923-1484941:-1
so has part: feature:1484812-1484941:-1:exon
so has part: feature:1482891-1483053:-1:exon
so has part: feature:1482305-1482396:-1:exon
so has part: feature:1479974-1480042:-1:exon
so has part: feature:1479138-1479239:-1:exon
so has part: feature:1479000-1479064:-1:exon
so has part: feature:1478638-1478689:-1:exon
so has part: feature:1477962-1478043:-1:exon
so has part: feature:1477612-1477702:-1:exon
so has part: feature:1477091-1477198:-1:exon
so has part: feature:1475923-1476728:-1:exon

position:1484941:-1
position: 1484941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1484812-1484941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1482891-1483053:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1482305-1482396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1479974-1480042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1479138-1479239:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1479000-1479064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1478638-1478689:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1477962-1478043:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1477612-1477702:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1477091-1477198:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1475923-1476728:-1:exon

RAB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: RAB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-34 isoform X2
translation: MMSVLAPVRRDRIIAELPQCFHKEAALHSRSSFHPQVSGACQEQRTGTVGFKISKIIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGVPFSLQLWDTAGQERFKCIASTYYRGAQAIVIVFDVNDVASLAHTRQWLADALKENDPSNVILFLVGSKKDLSSPAQYSLMERDAIKVAKEMRAEYWAVSSLTGENVREFFFRVASLTFESSVLAELEKSSARKIGDVVRIHSTDSDLYLTAQRRKSKCCG
SIO_010081: RAB34
subclass of: SO_0000673
so part of: RAB34
location: complement(join(1476661..1476728,1477091..1477198,1477612..1477702,1477962..1478043,1478638..1478689,1479000..1479064,1479138..1479239,1479974..1480039,1482305..1482396,1482891..1482947))
location: region:1476661-1482947:-1
so has part: feature:1482891-1482947:-1:exon
so has part: feature:1482305-1482396:-1:exon
so has part: feature:1479974-1480039:-1:exon
so has part: feature:1479138-1479239:-1:exon
so has part: feature:1479000-1479064:-1:exon
so has part: feature:1478638-1478689:-1:exon
so has part: feature:1477962-1478043:-1:exon
so has part: feature:1477612-1477702:-1:exon
so has part: feature:1477091-1477198:-1:exon
so has part: feature:1476661-1476728:-1:exon

XP_034608643.1
type: Protein
SIO_000068: ncbiprotein

position:1476661:-1
position: 1476661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1482947:-1
position: 1482947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1482891-1482947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1482305-1482396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1479974-1480039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1479138-1479239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1479000-1479064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1478638-1478689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1477962-1478043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1477612-1477702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1477091-1477198:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1476661-1476728:-1:exon

RAB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: RAB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-34 isoform X1
translation: MMSVLAPVRRDRIIAELPQCFHKEAALHSRSSFHPQVSGACQEQRTGTVGRFKISKIIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGVPFSLQLWDTAGQERFKCIASTYYRGAQAIVIVFDVNDVASLAHTRQWLADALKENDPSNVILFLVGSKKDLSSPAQYSLMERDAIKVAKEMRAEYWAVSSLTGENVREFFFRVASLTFESSVLAELEKSSARKIGDVVRIHSTDSDLYLTAQRRKSKCCG
SIO_010081: RAB34
subclass of: SO_0000673
so part of: RAB34
location: complement(join(1476661..1476728,1477091..1477198,1477612..1477702,1477962..1478043,1478638..1478689,1479000..1479064,1479138..1479239,1479974..1480042,1482305..1482396,1482891..1482947))
location: region:1476661-1482947:-1
so has part: feature:1482891-1482947:-1:exon
so has part: feature:1482305-1482396:-1:exon
so has part: feature:1479974-1480042:-1:exon
so has part: feature:1479138-1479239:-1:exon
so has part: feature:1479000-1479064:-1:exon
so has part: feature:1478638-1478689:-1:exon
so has part: feature:1477962-1478043:-1:exon
so has part: feature:1477612-1477702:-1:exon
so has part: feature:1477091-1477198:-1:exon
so has part: feature:1476661-1476728:-1:exon

XP_034608638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1482891-1482947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1482305-1482396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1479974-1480042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1479138-1479239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1479000-1479064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1478638-1478689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1477962-1478043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1477612-1477702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1477091-1477198:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1476661-1476728:-1:exon

RAB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: RAB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-34 isoform X1
translation: MMSVLAPVRRDRIIAELPQCFHKEAALHSRSSFHPQVSGACQEQRTGTVGRFKISKIIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGVPFSLQLWDTAGQERFKCIASTYYRGAQAIVIVFDVNDVASLAHTRQWLADALKENDPSNVILFLVGSKKDLSSPAQYSLMERDAIKVAKEMRAEYWAVSSLTGENVREFFFRVASLTFESSVLAELEKSSARKIGDVVRIHSTDSDLYLTAQRRKSKCCG
SIO_010081: RAB34
subclass of: SO_0000673
so part of: RAB34
location: complement(join(1476661..1476728,1477091..1477198,1477612..1477702,1477962..1478043,1478638..1478689,1479000..1479064,1479138..1479239,1479974..1480042,1482305..1482396,1482891..1482947))
location: region:1476661-1482947:-1
so has part: feature:1482891-1482947:-1:exon
so has part: feature:1482305-1482396:-1:exon
so has part: feature:1479974-1480042:-1:exon
so has part: feature:1479138-1479239:-1:exon
so has part: feature:1479000-1479064:-1:exon
so has part: feature:1478638-1478689:-1:exon
so has part: feature:1477962-1478043:-1:exon
so has part: feature:1477612-1477702:-1:exon
so has part: feature:1477091-1477198:-1:exon
so has part: feature:1476661-1476728:-1:exon

XP_034608640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1482891-1482947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1482305-1482396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1479974-1480042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1479138-1479239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1479000-1479064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1478638-1478689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1477962-1478043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1477612-1477702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1477091-1477198:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1476661-1476728:-1:exon

RAB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: RAB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-34 isoform X1
translation: MMSVLAPVRRDRIIAELPQCFHKEAALHSRSSFHPQVSGACQEQRTGTVGRFKISKIIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGVPFSLQLWDTAGQERFKCIASTYYRGAQAIVIVFDVNDVASLAHTRQWLADALKENDPSNVILFLVGSKKDLSSPAQYSLMERDAIKVAKEMRAEYWAVSSLTGENVREFFFRVASLTFESSVLAELEKSSARKIGDVVRIHSTDSDLYLTAQRRKSKCCG
SIO_010081: RAB34
subclass of: SO_0000673
so part of: RAB34
location: complement(join(1476661..1476728,1477091..1477198,1477612..1477702,1477962..1478043,1478638..1478689,1479000..1479064,1479138..1479239,1479974..1480042,1482305..1482396,1482891..1482947))
location: region:1476661-1482947:-1
so has part: feature:1482891-1482947:-1:exon
so has part: feature:1482305-1482396:-1:exon
so has part: feature:1479974-1480042:-1:exon
so has part: feature:1479138-1479239:-1:exon
so has part: feature:1479000-1479064:-1:exon
so has part: feature:1478638-1478689:-1:exon
so has part: feature:1477962-1478043:-1:exon
so has part: feature:1477612-1477702:-1:exon
so has part: feature:1477091-1477198:-1:exon
so has part: feature:1476661-1476728:-1:exon

XP_034608641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1482891-1482947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1482305-1482396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1479974-1480042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1479138-1479239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1479000-1479064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1478638-1478689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1477962-1478043:-1:exon