Trachemys scripta elegans isolate TJP31775 chromosome 13, CAS_Tse_1.0, whole genome shotgun sequence.
type: Entry
definition: Trachemys scripta elegans isolate TJP31775 chromosome 13, CAS_Tse_1.0, whole genome shotgun sequence.
sequence version: NC_048310.1
sequence date: 2020-05-31
sequence: sequence
division: CON
label: NC_048310.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA634151
dblink: SAMN12189062
keyword: WGS
keyword: RefSeq
source: Trachemys scripta elegans
organism: Trachemys scripta elegans
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys.
reference: 1
references: 32227195
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM023068.1.\nAssembly name: CAS_Tse_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the California Academy of\nSciences on 2020/05/15. The original whole-genome shotgun project\nhas the accession VIRI00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: California Academy of Sciences\nAssembly Date :: 15-JUN-2019\nAssembly Method :: Supernova v. 1.2\nAssembly Name :: CAS_Tse_1.0\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina NovaSeq; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Trachemys scripta elegans Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 43716676
topology: linear
so has quality: SO_0000987
location: 1..43716676
location: region:1-43716676:1
RO_0002162: 31138

NC_048310
type: RefSeq
SIO_000068: refseq

PRJNA634151
type: BioProject
SIO_000068: bioproject

SAMN12189062
type: BioSample
SIO_000068: biosample

1
title: An Annotated Chromosome-Level Reference Genome of the Red-Eared Slider Turtle (Trachemys scripta elegans)
author: Brian Simison, W.
author: Parham, J.F.
author: Papenfuss, T.J.
author: Lam, A.W.
author: Henderson, J.B.
journal: Genome Biol Evol
volume: 12
issue: 4
pages: 456-462
year: 2020
pubmed: 32227195

32227195
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43716676:1
position: 43716676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-43716676:1:source
so part of: sequence
organism: Trachemys scripta elegans
mol type: genomic DNA
isolate: TJP31775
isolation source: river
sub species: elegans
chromosome: 13
country: USA
collection date: 14-Feb-2018

31138
type: Taxonomy
SIO_000068: taxonomy

LOC117886492
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117886492
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<2322..54490)
location: region:2322-54490:-1
so has part: feature:2322-54490:-1:exon
subclass of: SO_0000010

117886492
type: Gene
SIO_000068: ncbigene

position:2322:-1
position: 2322
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:54490:-1
position: 54490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2322-54490:-1:exon

LOC117886492
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117886492
product: ubiquitin-associated protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_034788361.1
SIO_010081: LOC117886492
subclass of: SO_0000673
so part of: LOC117886492
location: complement(join(<2322..2374,3956..4015,8553..8656,10039..10093,24663..24740,27060..27213,33301..33411,36536..36613,41255..41394,54182..54490))
location: region:2322-54490:-1
so has part: feature:54182-54490:-1:exon
so has part: feature:41255-41394:-1:exon
so has part: feature:36536-36613:-1:exon
so has part: feature:33301-33411:-1:exon
so has part: feature:27060-27213:-1:exon
so has part: feature:24663-24740:-1:exon
so has part: feature:10039-10093:-1:exon
so has part: feature:8553-8656:-1:exon
so has part: feature:3956-4015:-1:exon
so has part: feature:2322-2374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54182-54490:-1:exon

position:54182:-1
position: 54182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41255-41394:-1:exon

position:41255:-1
position: 41255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41394:-1
position: 41394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:36536-36613:-1:exon

position:36536:-1
position: 36536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36613:-1
position: 36613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:33301-33411:-1:exon

position:33301:-1
position: 33301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33411:-1
position: 33411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:27060-27213:-1:exon

position:27060:-1
position: 27060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27213:-1
position: 27213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:24663-24740:-1:exon

position:24663:-1
position: 24663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24740:-1
position: 24740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10039-10093:-1:exon

position:10039:-1
position: 10039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10093:-1
position: 10093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8553-8656:-1:exon

position:8553:-1
position: 8553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8656:-1
position: 8656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3956-4015:-1:exon

position:3956:-1
position: 3956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4015:-1
position: 4015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2322-2374:-1:exon

position:2374:-1
position: 2374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117886492
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117886492
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 2-like
translation: MMTSVGSERSRGTRDKTQISTTQPTQPQKQVVQATAEQIRLAQMIYDKNDADFEDKVKQLMEVTGKNQDECIVALHDCNGDVNRAINILLEGSSDTTSWETVGGKKKSLGKESSENKENREKRGDREVSRGRGSSNRRGRGGSRGREFRVEENGVDNSQGERPSDRGKRGRGRGFGRGRGRGAGRFSAQGMGTFNPADYTETSATDGFGPKPEVWETGQNDADDGTEPAQSGHYLAQDLPNNCGLQGAWKNSIEEWTAEDWNED
SIO_010081: LOC117886492
subclass of: SO_0000673
so part of: LOC117886492
location: complement(join(<2322..2374,3956..4015,8553..8656,10039..10093,24663..24740,27060..27213,33301..33411,36536..36613,41255..41353))
location: region:2322-41353:-1
so has part: feature:41255-41353:-1:exon
so has part: feature:36536-36613:-1:exon
so has part: feature:33301-33411:-1:exon
so has part: feature:27060-27213:-1:exon
so has part: feature:24663-24740:-1:exon
so has part: feature:10039-10093:-1:exon
so has part: feature:8553-8656:-1:exon
so has part: feature:3956-4015:-1:exon
so has part: feature:2322-2374:-1:exon

XP_034644252.1
type: Protein
SIO_000068: ncbiprotein

position:41353:-1
position: 41353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41255-41353:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:36536-36613:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33301-33411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27060-27213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24663-24740:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10039-10093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8553-8656:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3956-4015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2322-2374:-1:exon

DCAF12
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: DCAF12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(102789..136399)
location: region:102789-136399:-1
so has part: feature:102789-136399:-1:exon
subclass of: SO_0000010

117886556
type: Gene
SIO_000068: ncbigene

position:102789:-1
position: 102789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136399:-1
position: 136399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102789-136399:-1:exon

DCAF12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: DCAF12
product: DDB1 and CUL4 associated factor 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_034788485.1
SIO_010081: DCAF12
subclass of: SO_0000673
so part of: DCAF12
location: complement(join(102789..105044,106438..106622,109069..109231,110867..110932,112021..112214,120647..120707,122768..122974,134502..134756,136153..136399))
location: region:102789-136399:-1
so has part: feature:136153-136399:-1:exon
so has part: feature:134502-134756:-1:exon
so has part: feature:122768-122974:-1:exon
so has part: feature:120647-120707:-1:exon
so has part: feature:112021-112214:-1:exon
so has part: feature:110867-110932:-1:exon
so has part: feature:109069-109231:-1:exon
so has part: feature:106438-106622:-1:exon
so has part: feature:102789-105044:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136153-136399:-1:exon

position:136153:-1
position: 136153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134502-134756:-1:exon

position:134502:-1
position: 134502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134756:-1
position: 134756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:122768-122974:-1:exon

position:122768:-1
position: 122768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122974:-1
position: 122974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:120647-120707:-1:exon

position:120647:-1
position: 120647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120707:-1
position: 120707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:112021-112214:-1:exon

position:112021:-1
position: 112021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112214:-1
position: 112214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:110867-110932:-1:exon

position:110867:-1
position: 110867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110932:-1
position: 110932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:109069-109231:-1:exon

position:109069:-1
position: 109069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109231:-1
position: 109231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:106438-106622:-1:exon

position:106438:-1
position: 106438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106622:-1
position: 106622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:102789-105044:-1:exon

position:105044:-1
position: 105044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCAF12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: DCAF12
product: DDB1 and CUL4 associated factor 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034788486.1
SIO_010081: DCAF12
subclass of: SO_0000673
so part of: DCAF12
location: complement(join(102789..105044,106438..106622,109069..109231,110867..110932,112021..112214,120647..120707,122768..122974,134502..134756,135226..135303))
location: region:102789-135303:-1
so has part: feature:135226-135303:-1:exon
so has part: feature:134502-134756:-1:exon
so has part: feature:122768-122974:-1:exon
so has part: feature:120647-120707:-1:exon
so has part: feature:112021-112214:-1:exon
so has part: feature:110867-110932:-1:exon
so has part: feature:109069-109231:-1:exon
so has part: feature:106438-106622:-1:exon
so has part: feature:102789-105044:-1:exon

position:135303:-1
position: 135303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135226-135303:-1:exon

position:135226:-1
position: 135226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134502-134756:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:122768-122974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120647-120707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112021-112214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110867-110932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109069-109231:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106438-106622:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102789-105044:-1:exon

DCAF12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: DCAF12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 12 isoform X1
translation: MARKTVSRKRKAAAATAAAPGGLRGEQYGWDHSAHKRKRLPPVKKSLVYYLKGREVRLQNESSYHRLLHGYAAQQLPSLLKEREFHLGTLNKVFASQWLNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPDMVNQQGCGIHAIELNPSRTLLATGGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWISDTMAVSGSRDGSMGLWEVTEDVLTKSDARHNLSRVPVYAHITHRALKDIPKENTNPDNCKVRALAFNNKNKELGAVSLDGYFHLWKAEHTLSKLLSTKLPYCRENVCLAYGQEWSVYAVGSQAHVSFLDPRQPSHNVKSVCSRERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLDEKPNHTCRGQKQKLGGSEILKLTTGKGWLNHDETWRNYFSDINFFANAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS
SIO_010081: DCAF12
subclass of: SO_0000673
so part of: DCAF12
location: complement(join(104886..105044,106438..106622,109069..109231,110867..110932,112021..112214,120647..120707,122768..122974,134502..134756,136153..136233))
location: region:104886-136233:-1
so has part: feature:136153-136233:-1:exon
so has part: feature:134502-134756:-1:exon
so has part: feature:122768-122974:-1:exon
so has part: feature:120647-120707:-1:exon
so has part: feature:112021-112214:-1:exon
so has part: feature:110867-110932:-1:exon
so has part: feature:109069-109231:-1:exon
so has part: feature:106438-106622:-1:exon
so has part: feature:104886-105044:-1:exon

XP_034644376.1
type: Protein
SIO_000068: ncbiprotein

position:104886:-1
position: 104886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136233:-1
position: 136233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136153-136233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134502-134756:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:122768-122974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120647-120707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112021-112214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110867-110932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109069-109231:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106438-106622:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:104886-105044:-1:exon

DCAF12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: DCAF12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 12 isoform X2
translation: MLRSDCKRSGRRCFGAQVTTQYGWDHSAHKRKRLPPVKKSLVYYLKGREVRLQNESSYHRLLHGYAAQQLPSLLKEREFHLGTLNKVFASQWLNHRQVVCGTKCNTLFVVDVQTGQITKIPILKDREPDMVNQQGCGIHAIELNPSRTLLATGGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWISDTMAVSGSRDGSMGLWEVTEDVLTKSDARHNLSRVPVYAHITHRALKDIPKENTNPDNCKVRALAFNNKNKELGAVSLDGYFHLWKAEHTLSKLLSTKLPYCRENVCLAYGQEWSVYAVGSQAHVSFLDPRQPSHNVKSVCSRERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLDEKPNHTCRGQKQKLGGSEILKLTTGKGWLNHDETWRNYFSDINFFANAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS
SIO_010081: DCAF12
subclass of: SO_0000673
so part of: DCAF12
location: complement(join(104886..105044,106438..106622,109069..109231,110867..110932,112021..112214,120647..120707,122768..122974,134502..134756,135226..135288))
location: region:104886-135288:-1
so has part: feature:135226-135288:-1:exon
so has part: feature:134502-134756:-1:exon
so has part: feature:122768-122974:-1:exon
so has part: feature:120647-120707:-1:exon
so has part: feature:112021-112214:-1:exon
so has part: feature:110867-110932:-1:exon
so has part: feature:109069-109231:-1:exon
so has part: feature:106438-106622:-1:exon
so has part: feature:104886-105044:-1:exon

XP_034644377.1
type: Protein
SIO_000068: ncbiprotein

position:135288:-1
position: 135288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135226-135288:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134502-134756:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:122768-122974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120647-120707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112021-112214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110867-110932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109069-109231:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106438-106622:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:104886-105044:-1:exon

UBAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: UBAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 148871..206380
location: region:148871-206380:1
so has part: feature:148871-206380:1:exon
subclass of: SO_0000010

117886465
type: Gene
SIO_000068: ncbigene

position:148871:1
position: 148871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206380:1
position: 206380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148871-206380:1:exon

UBAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: UBAP1
product: ubiquitin associated protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034788297.1
SIO_010081: UBAP1
subclass of: SO_0000673
so part of: UBAP1
location: join(148871..149041,180542..180582,188439..188563,189813..189866,192904..193818,199298..199333,199910..200110,205126..206380)
location: region:148871-206380:1
so has part: feature:148871-149041:1:exon
so has part: feature:180542-180582:1:exon
so has part: feature:188439-188563:1:exon
so has part: feature:189813-189866:1:exon
so has part: feature:192904-193818:1:exon
so has part: feature:199298-199333:1:exon
so has part: feature:199910-200110:1:exon
so has part: feature:205126-206380:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148871-149041:1:exon

position:149041:1
position: 149041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:180542-180582:1:exon

position:180542:1
position: 180542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180582:1
position: 180582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:188439-188563:1:exon

position:188439:1
position: 188439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188563:1
position: 188563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:189813-189866:1:exon

position:189813:1
position: 189813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189866:1
position: 189866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:192904-193818:1:exon

position:192904:1
position: 192904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193818:1
position: 193818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:199298-199333:1:exon

position:199298:1
position: 199298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199333:1
position: 199333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:199910-200110:1:exon

position:199910:1
position: 199910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200110:1
position: 200110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:205126-206380:1:exon

position:205126:1
position: 205126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: UBAP1
product: ubiquitin associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_034788295.1
SIO_010081: UBAP1
subclass of: SO_0000673
so part of: UBAP1
location: join(148874..149041,180542..180582,188439..188563,189813..189866,192904..193818,199298..199333,199910..200110,203027..203128,205126..206380)
location: region:148874-206380:1
so has part: feature:148874-149041:1:exon
so has part: feature:180542-180582:1:exon
so has part: feature:188439-188563:1:exon
so has part: feature:189813-189866:1:exon
so has part: feature:192904-193818:1:exon
so has part: feature:199298-199333:1:exon
so has part: feature:199910-200110:1:exon
so has part: feature:203027-203128:1:exon
so has part: feature:205126-206380:1:exon

position:148874:1
position: 148874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148874-149041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180542-180582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188439-188563:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189813-189866:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192904-193818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199298-199333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199910-200110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203027-203128:1:exon

position:203027:1
position: 203027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203128:1
position: 203128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:205126-206380:1:exon

UBAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: UBAP1
product: ubiquitin associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_034788296.1
SIO_010081: UBAP1
subclass of: SO_0000673
so part of: UBAP1
location: join(148876..149041,180542..180582,188439..188563,192904..193818,199298..199333,199910..200110,203027..203128,205126..206380)
location: region:148876-206380:1
so has part: feature:148876-149041:1:exon
so has part: feature:180542-180582:1:exon
so has part: feature:188439-188563:1:exon
so has part: feature:192904-193818:1:exon
so has part: feature:199298-199333:1:exon
so has part: feature:199910-200110:1:exon
so has part: feature:203027-203128:1:exon
so has part: feature:205126-206380:1:exon

position:148876:1
position: 148876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148876-149041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180542-180582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188439-188563:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192904-193818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:199298-199333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199910-200110:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203027-203128:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205126-206380:1:exon

UBAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: UBAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 1 isoform X1
translation: MASKKSGSDFHGPFSYLDDVPFKIGDKFKTPAKVGLPMGFCLPDSPQLVREVQSSLEYGFWVMTTEPIKSIYDFSLEKRTIEWAEDIKKIQAAQREAERKAAQAIANSRAASDDNSKMGFSEAVPLPINPILASLQHNNILTPTPANSSAIKQKVLSPPYPKADFNPADFECEEDPFDNLELKTIDEKEELKNILEIHVGTTGPIVTQLLENNLPKIGPESVLQDQEVLASIERATLDFKPLHKPNGFITLPQLENCEKMSLSSKVSLSPITSVSNIKSLSFPKLDADESDQKMSKLTSTFHSATCLHNGTFLSSLQACSPSKASELNGHHVVGLSALNVDSGMETSTLSSSSRLPSLSVSTPCTEEQSSPNTATKVQPDYKESEFPMVTHQNFTVSKVPSNTSCTKWSSGPTYSDVLQALSASERQCVETVVNMGYSYEDVMTAMKKKGQNIEQVLDYLFAHSQLCEKGFDPLLVEAALEMYQCSEEKTTELLQLMSKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARAGAS
SIO_010081: UBAP1
subclass of: SO_0000673
so part of: UBAP1
location: join(180549..180582,188439..188563,189813..189866,192904..193818,199298..199333,199910..200110,203027..203128,205126..205266)
location: region:180549-205266:1
so has part: feature:180549-180582:1:exon
so has part: feature:188439-188563:1:exon
so has part: feature:189813-189866:1:exon
so has part: feature:192904-193818:1:exon
so has part: feature:199298-199333:1:exon
so has part: feature:199910-200110:1:exon
so has part: feature:203027-203128:1:exon
so has part: feature:205126-205266:1:exon

XP_034644186.1
type: Protein
SIO_000068: ncbiprotein

position:180549:1
position: 180549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205266:1
position: 205266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180549-180582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188439-188563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189813-189866:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192904-193818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:199298-199333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199910-200110:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203027-203128:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205126-205266:1:exon

UBAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: UBAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 1 isoform X3
translation: MASKKSGSDFHGPFSYLDDVPFKIGDKFKTPAKVGLPMGFCLPDSPQLVREVQSSLEYGFWVMTTEPIKSIYDFSLEKRTIEWAEDIKKIQAAQREAERKAAQAIANSRAASDDNSKMGFSEAVPLPINPILASLQHNNILTPTPANSSAIKQKVLSPPYPKADFNPADFECEEDPFDNLELKTIDEKEELKNILEIHVGTTGPIVTQLLENNLPKIGPESVLQDQEVLASIERATLDFKPLHKPNGFITLPQLENCEKMSLSSKVSLSPITSVSNIKSLSFPKLDADESDQKMSKLTSTFHSATCLHNGTFLSSLQACSPSKASELNGHHVVGLSALNVDSGMETSTLSSSSRLPSLSVSTPCTEEQSSPNTATKVQPDYKESEFPMVTHQNFTVSKVPSNTSCTKWSSGPTYSDVLQALSASERQCVETVVNMGYSYEDVMTAMKKKGQNIEQTTELLQLMSKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARAGAS
SIO_010081: UBAP1
subclass of: SO_0000673
so part of: UBAP1
location: join(180549..180582,188439..188563,189813..189866,192904..193818,199298..199333,199910..200110,205126..205266)
location: region:180549-205266:1
so has part: feature:180549-180582:1:exon
so has part: feature:188439-188563:1:exon
so has part: feature:189813-189866:1:exon
so has part: feature:192904-193818:1:exon
so has part: feature:199298-199333:1:exon
so has part: feature:199910-200110:1:exon
so has part: feature:205126-205266:1:exon

XP_034644188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180549-180582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188439-188563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189813-189866:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192904-193818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:199298-199333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199910-200110:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205126-205266:1:exon

UBAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: UBAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 1 isoform X2
translation: MASKKSGSDFHGPFSYLDDVPFKIGDKFKTPAKVGLPMGFCLPDSPQLVREVQYDFSLEKRTIEWAEDIKKIQAAQREAERKAAQAIANSRAASDDNSKMGFSEAVPLPINPILASLQHNNILTPTPANSSAIKQKVLSPPYPKADFNPADFECEEDPFDNLELKTIDEKEELKNILEIHVGTTGPIVTQLLENNLPKIGPESVLQDQEVLASIERATLDFKPLHKPNGFITLPQLENCEKMSLSSKVSLSPITSVSNIKSLSFPKLDADESDQKMSKLTSTFHSATCLHNGTFLSSLQACSPSKASELNGHHVVGLSALNVDSGMETSTLSSSSRLPSLSVSTPCTEEQSSPNTATKVQPDYKESEFPMVTHQNFTVSKVPSNTSCTKWSSGPTYSDVLQALSASERQCVETVVNMGYSYEDVMTAMKKKGQNIEQVLDYLFAHSQLCEKGFDPLLVEAALEMYQCSEEKTTELLQLMSKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARAGAS
SIO_010081: UBAP1
subclass of: SO_0000673
so part of: UBAP1
location: join(180549..180582,188439..188563,192904..193818,199298..199333,199910..200110,203027..203128,205126..205266)
location: region:180549-205266:1
so has part: feature:180549-180582:1:exon
so has part: feature:188439-188563:1:exon
so has part: feature:192904-193818:1:exon
so has part: feature:199298-199333:1:exon
so has part: feature:199910-200110:1:exon
so has part: feature:203027-203128:1:exon
so has part: feature:205126-205266:1:exon

XP_034644187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180549-180582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188439-188563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192904-193818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:199298-199333:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:199910-200110:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203027-203128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205126-205266:1:exon

KIF24
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: KIF24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(212134..248828)
location: region:212134-248828:-1
so has part: feature:212134-248828:-1:exon
subclass of: SO_0000010

117886660
type: Gene
SIO_000068: ncbigene

position:212134:-1
position: 212134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248828:-1
position: 248828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212134-248828:-1:exon

KIF24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: KIF24
product: kinesin family member 24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034788667.1
SIO_010081: KIF24
subclass of: SO_0000673
so part of: KIF24
location: complement(join(212134..214013,217543..217636,219404..221890,222915..223024,224113..224184,227133..227238,228410..228531,231050..231137,233192..233407,234735..234832,236587..236776,239643..240282,248711..248828))
location: region:212134-248828:-1
so has part: feature:248711-248828:-1:exon
so has part: feature:239643-240282:-1:exon
so has part: feature:236587-236776:-1:exon
so has part: feature:234735-234832:-1:exon
so has part: feature:233192-233407:-1:exon
so has part: feature:231050-231137:-1:exon
so has part: feature:228410-228531:-1:exon
so has part: feature:227133-227238:-1:exon
so has part: feature:224113-224184:-1:exon
so has part: feature:222915-223024:-1:exon
so has part: feature:219404-221890:-1:exon
so has part: feature:217543-217636:-1:exon
so has part: feature:212134-214013:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248711-248828:-1:exon

position:248711:-1
position: 248711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:239643-240282:-1:exon

position:239643:-1
position: 239643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240282:-1
position: 240282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:236587-236776:-1:exon

position:236587:-1
position: 236587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236776:-1
position: 236776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234735-234832:-1:exon

position:234735:-1
position: 234735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234832:-1
position: 234832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:233192-233407:-1:exon

position:233192:-1
position: 233192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233407:-1
position: 233407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:231050-231137:-1:exon

position:231050:-1
position: 231050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231137:-1
position: 231137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:228410-228531:-1:exon

position:228410:-1
position: 228410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228531:-1
position: 228531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:227133-227238:-1:exon

position:227133:-1
position: 227133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227238:-1
position: 227238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:224113-224184:-1:exon

position:224113:-1
position: 224113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224184:-1
position: 224184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:222915-223024:-1:exon

position:222915:-1
position: 222915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223024:-1
position: 223024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:219404-221890:-1:exon

position:219404:-1
position: 219404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221890:-1
position: 221890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:217543-217636:-1:exon

position:217543:-1
position: 217543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217636:-1
position: 217636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:212134-214013:-1:exon

position:214013:-1
position: 214013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIF24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: KIF24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF24
translation: MASCLYECLCEAELEKYYPQFVALGLQKIDELAKIAMKDYAKLGVHNMNDRKRLFQLIRIIKIMQEEEEGADTTKQDFQPCDLYIQPQVTRSGPRRQLHFESLFEKKDGTGKDCELELQSFSDFCANKEKESLVEMLGHVLPGDSEDNKITRRDILNVPGTCTQNELDCPTIYSSNNIAPLLGDSEAPIIQRVTHISGYNYGLPHSCIRSSTAEKEMPWTETDKIRVCVRKRPLGLREERRGEVNIIRVEDKETLLLHEKKEAVDLTQYILQHVFYFDEVFGEACTNQDVYMKTAHPLIQHIFNGGNATCFAYGQTGAGKTYTMIGSHQNPGLYALAAKDIFRQLEASQSRRERRVWISFYEIYCGQLYDLLNGRRRLFAREDSKHVVQIVGLREVQVDTVDLLLEVILKGGKERSTGATGVNSDSSRSHAIIQIQIKDSANRMFGRISFIDLAGSERAADARDSDKQTKMEGAEINQSLLALKECIRALDQEHAHTPFRQSKLTQVLKDSFIGNSKTCMIANVSPSHIATEHTLNTLRYADRVKELKKGIKCCTPVTNRRQIAGNVSPKRIQNSPSTHVGDKSSPKKVKLGLHHPLSSLRIKASPSVFHPTNVPFSSTPKGAKGHAHKGNPSSPWLNHTSPIKGMLKIGHHPMKKKIDDLTLPSEKHHTAKDCVAATAAVPETRESGQGDNCIQDKQPVRCLKVQTVQPVQKQLISRNGFSFGDGNHPSDSSQRSANVFTKQCIETWAKLPPHQKEREQHLRLYHQQFQQPPILQQKLNYQPLERFLAQYKPQEIRVKQDRSLPPTDSQCKEGMLLEDLDDSDFSEDSFSPISNQRKVKRNTSESSQLSFFLHQREQESEEEKGRERQGLFFEHATHTQEHELNDSWDYGKGFAFPEPGEPIIDGESSKTQSDWSTEDDFTIDSSVNNNTAEKPYCLREELVSTWKNSKDLPPDHKQYKSEYRHLVYPGESSSFPEKGTQSSHVPHVLDSGTTKCNKSSLPRAQREESIKDGQAPVAGNLEGKKLKNGTSPCGAFNTSSEFTSELMAPLTMSLLDSEEAADQENILSDQEKALQVKQMLERKTCSPSKRLEGEARQFPRNKASPTGSMPELGEQMYHGERKSTLQHSPQTENKRLSPSCRDAKPSCSLGGSSPWNTHQSSINGLSVRDEDLTEASASVRVKNPCGENEDELLLRNLKCREYLDNSRQYDADSENTTGSLLSGPEKSSMGKGPNAGPPSQTVHADLPEKGYFSCAPSILNAGRVECTTSSPSRESSPLQSRSEFRSKDLNHAEDTFKLSFSGEEIGLLKNKLMQSIFTQDCFDAAEQDSRSVTKEIRSLANQNTRPNPSIISAQIDTSETSNRHREALGKAQQLVIQAHREQLDEMASLCFKEETLINQMSAADFEKYVTKLDEILMLKSKCIQSMRAQLQLYLAWPETDATLQRTTPP
SIO_010081: KIF24
subclass of: SO_0000673
so part of: KIF24
location: complement(join(213873..214013,217543..217636,219404..221890,222915..223024,224113..224184,227133..227238,228410..228531,231050..231137,233192..233407,234735..234832,236587..236776,239643..240268))
location: region:213873-240268:-1
so has part: feature:239643-240268:-1:exon
so has part: feature:236587-236776:-1:exon
so has part: feature:234735-234832:-1:exon
so has part: feature:233192-233407:-1:exon
so has part: feature:231050-231137:-1:exon
so has part: feature:228410-228531:-1:exon
so has part: feature:227133-227238:-1:exon
so has part: feature:224113-224184:-1:exon
so has part: feature:222915-223024:-1:exon
so has part: feature:219404-221890:-1:exon
so has part: feature:217543-217636:-1:exon
so has part: feature:213873-214013:-1:exon

XP_034644558.1
type: Protein
SIO_000068: ncbiprotein

position:213873:-1
position: 213873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240268:-1
position: 240268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239643-240268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236587-236776:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234735-234832:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233192-233407:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231050-231137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228410-228531:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227133-227238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:224113-224184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:222915-223024:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:219404-221890:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217543-217636:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:213873-214013:-1:exon

LOC117886661
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117886661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 228472..246595
location: region:228472-246595:1
so has part: feature:228472-246595:1:exon
subclass of: SO_0000011

117886661
type: Gene
SIO_000068: ncbigene

position:228472:1
position: 228472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246595:1
position: 246595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228472-246595:1:exon

LOC117886661
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117886661
product: uncharacterized LOC117886661
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004648014.1
SIO_010081: LOC117886661
subclass of: SO_0000673
so part of: LOC117886661
location: join(228472..228558,230288..230367,246366..246595)
location: region:228472-246595:1
so has part: feature:228472-228558:1:exon
so has part: feature:230288-230367:1:exon
so has part: feature:246366-246595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228472-228558:1:exon

position:228558:1
position: 228558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:230288-230367:1:exon

position:230288:1
position: 230288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230367:1
position: 230367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:246366-246595:1:exon

position:246366:1
position: 246366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUDT2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: NUDT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 249043..260119
location: region:249043-260119:1
so has part: feature:249043-260119:1:exon
subclass of: SO_0000010

117886595
type: Gene
SIO_000068: ncbigene

position:249043:1
position: 249043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260119:1
position: 260119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249043-260119:1:exon

NUDT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: NUDT2
product: nudix hydrolase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_034788566.1
SIO_010081: NUDT2
subclass of: SO_0000673
so part of: NUDT2
location: join(249043..249109,253638..253787,259174..260119)
location: region:249043-260119:1
so has part: feature:249043-249109:1:exon
so has part: feature:253638-253787:1:exon
so has part: feature:259174-260119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249043-249109:1:exon

position:249109:1
position: 249109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:253638-253787:1:exon

position:253638:1
position: 253638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253787:1
position: 253787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:259174-260119:1:exon

position:259174:1
position: 259174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUDT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: NUDT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]
translation: MALRACGLIIYRRLQAGSPSSKVGDNIEYLLLQTSYGTHHWTPPKGHVDPGEDDLQTALRETQEEAGLNSSQFTLIEGFKKELQYTVRSKPKTVIYWLAEMNDCNTEIKLSDEHQAFRWLNLEEACKCAEYKEMQAAFRAVHQFLCSKA
SIO_010081: NUDT2
subclass of: SO_0000673
so part of: NUDT2
location: join(253652..253787,259174..259487)
location: region:253652-259487:1
so has part: feature:253652-253787:1:exon
so has part: feature:259174-259487:1:exon

XP_034644457.1
type: Protein
SIO_000068: ncbiprotein

position:253652:1
position: 253652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259487:1
position: 259487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253652-253787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259174-259487:1:exon

LOC117886593
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117886593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(260611..282857)
location: region:260611-282857:-1
so has part: feature:260611-282857:-1:exon
subclass of: SO_0000010

117886593
type: Gene
SIO_000068: ncbigene

position:260611:-1
position: 260611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282857:-1
position: 282857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260611-282857:-1:exon

LOC117886593
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117886593
product: uncharacterized LOC117886593, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034788564.1
SIO_010081: LOC117886593
subclass of: SO_0000673
so part of: LOC117886593
location: complement(join(260611..261959,262835..262925,263559..263624,263976..264122,269851..270312,282256..282857))
location: region:260611-282857:-1
so has part: feature:282256-282857:-1:exon
so has part: feature:269851-270312:-1:exon
so has part: feature:263976-264122:-1:exon
so has part: feature:263559-263624:-1:exon
so has part: feature:262835-262925:-1:exon
so has part: feature:260611-261959:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282256-282857:-1:exon

position:282256:-1
position: 282256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269851-270312:-1:exon

position:269851:-1
position: 269851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270312:-1
position: 270312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:263976-264122:-1:exon

position:263976:-1
position: 263976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264122:-1
position: 264122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:263559-263624:-1:exon

position:263559:-1
position: 263559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263624:-1
position: 263624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:262835-262925:-1:exon

position:262835:-1
position: 262835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262925:-1
position: 262925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:260611-261959:-1:exon

position:261959:-1
position: 261959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117886593
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117886593
product: uncharacterized LOC117886593, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034788565.1
SIO_010081: LOC117886593
subclass of: SO_0000673
so part of: LOC117886593
location: complement(join(260611..261959,262835..262925,263976..264122,269851..270312,282256..282855))
location: region:260611-282855:-1
so has part: feature:282256-282855:-1:exon
so has part: feature:269851-270312:-1:exon
so has part: feature:263976-264122:-1:exon
so has part: feature:262835-262925:-1:exon
so has part: feature:260611-261959:-1:exon

position:282855:-1
position: 282855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282256-282855:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269851-270312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263976-264122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262835-262925:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:260611-261959:-1:exon

LOC117886593
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117886593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117886593 isoform X2
translation: MKARVRKTNQLPLSSPGRSFRGLLFPLCCWETMELFKWSLRWMCLLPLLQVSEGQSFLIKNIRLEKCMQVAHQESNQISLADCKLHAQQQQWRWDPRTKSIVSLKTKQCLTIRKPQEFASAYLEPCGDRERQAWACSKKGHLTLHGLGLHLNAKQGHKVFVSREKDKFSKWKTLSDETVCAVSPTVAPRLGDLMQEAALVGVHKTKTISSSAKIHTSSRGSLLELPVSTLAEFNSTVSPPRSNQMLDVLATDKATKWKTAMLVLSPFAFILGLIILTLNVRYNKKKKLSALKSYPESCNRAGLREQSPLTVTAGSWQRSIPASRSPPLQHGEILIEWKDGTVTPLFDNANF
SIO_010081: LOC117886593
subclass of: SO_0000673
so part of: LOC117886593
location: complement(join(261755..261959,262835..262925,263976..264122,269851..270312,282256..282406))
location: region:261755-282406:-1
so has part: feature:282256-282406:-1:exon
so has part: feature:269851-270312:-1:exon
so has part: feature:263976-264122:-1:exon
so has part: feature:262835-262925:-1:exon
so has part: feature:261755-261959:-1:exon

XP_034644456.1
type: Protein
SIO_000068: ncbiprotein

position:261755:-1
position: 261755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282406:-1
position: 282406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282256-282406:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269851-270312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263976-264122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262835-262925:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:261755-261959:-1:exon

LOC117886593
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117886593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117886593 isoform X1
translation: MKARVRKTNQLPLSSPGRSFRGLLFPLCCWETMELFKWSLRWMCLLPLLQVSEGQSFLIKNIRLEKCMQVAHQESNQISLADCKLHAQQQQWRWDPRTKSIVSLKTKQCLTIRKPQEFASAYLEPCGDRERQAWACSKKGHLTLHGLGLHLNAKQGHKVFVSREKDKFSKWKTLSDETVCAVSPTVAPRLGDLMQEAALVGVHKTKTISSSAKIHTSSRGSLLELPVSTLAEFNSTVSPPRSNQMLDVLATDKEVSGQFKNQSGHRGKGAGARLTATKWKTAMLVLSPFAFILGLIILTLNVRYNKKKKLSALKSYPESCNRAGLREQSPLTVTAGSWQRSIPASRSPPLQHGEILIEWKDGTVTPLFDNANF
SIO_010081: LOC117886593
subclass of: SO_0000673
so part of: LOC117886593
location: complement(join(261755..261959,262835..262925,263559..263624,263976..264122,269851..270312,282256..282406))
location: region:261755-282406:-1
so has part: feature:282256-282406:-1:exon
so has part: feature:269851-270312:-1:exon
so has part: feature:263976-264122:-1:exon
so has part: feature:263559-263624:-1:exon
so has part: feature:262835-262925:-1:exon
so has part: feature:261755-261959:-1:exon

XP_034644455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282256-282406:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269851-270312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263976-264122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:263559-263624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262835-262925:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:261755-261959:-1:exon

MYORG
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: MYORG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 300217..>302852
location: region:300217-302852:1
so has part: feature:300217-302852:1:exon
subclass of: SO_0000010

117886828
type: Gene
SIO_000068: ncbigene

position:300217:1
position: 300217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302852:1
position: 302852
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300217-302852:1:exon

MYORG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: MYORG
product: myogenesis regulating glycosidase (putative)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034788897.1
SIO_010081: MYORG
subclass of: SO_0000673
so part of: MYORG
location: 300217..>302852
location: region:300217-302852:1
so has part: feature:300217-302852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300217-302852:1:exon

MYORG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: MYORG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myogenesis-regulating glycosidase
translation: MENQPFHRLRKNRSSEKGNAMGTHLPDSFTPGKPKPSKERKPMIGAVLVGLILFISAVVAWCYYMASLRKAEQLKMELMDLRKDGFIIKNHNGEVVFRLAFQSGTLDLESCLKEGEILTCTRSDRGKLNFFIQTVKPKDTVMCYRVRWEEFVVDTVVEHTMFWEDTHWYGGCEMSVQHWPIRLPGYQEPMPFVTSDVYSFRGSFGGILERYWLSSKAAAIKINDLVPFHLGFNASERSLFFQARYKDSPYKPPLGQQPFPELSYRVCVGSDVTSIHKYMVRRYFNKPSKIPSENAFRYPIWSTWALYKNDIDQDKLLRFAEKIKKYRFNCSHIEIDDTYTQTYGDFDFDPVKFPNVTEMFKTLKKEGFKVTLWTHPFINYNSSNFGVGIERQLFIKELTGKLPAMVKWWNGIGSILDFTNPTAREWFQSHLKQLRSKYGIASFKFDAGEVSYLPKQFSTFRPLSDPSIWSRRYTEMAIPFYELAEVRVGYQSQNISCFFRIIDRDSVWGYELGLKSLIPTVLTISMLGYPFILPDMIGGNFLPNKTEGAVEIPDQELYIRWLELSAFMPSMQFSIPPWLYDKEVIEIAQKFTELHESLVAPLLLELAGEVTNTGDPIIRPIWWISPSDEFAHKIDSQFLIGDTLMVAPVLELGKQERDVYLPAGKWRSYKGELFEKTPVLLTD
SIO_010081: MYORG
subclass of: SO_0000673
so part of: MYORG
location: 300804..>302852
location: region:300804-302852:1
so has part: feature:300804-302852:1:exon

XP_034644788.1
type: Protein
SIO_000068: ncbiprotein

position:300804:1
position: 300804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300804-302852:1:exon

MRPL17
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: MRPL17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 304593..306049
location: region:304593-306049:1
so has part: feature:304593-306049:1:exon
subclass of: SO_0000010

117886808
type: Gene
SIO_000068: ncbigene

position:304593:1
position: 304593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306049:1
position: 306049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304593-306049:1:exon

MRPL17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: MRPL17
product: mitochondrial ribosomal protein L17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_034788859.1
SIO_010081: MRPL17
subclass of: SO_0000673
so part of: MRPL17
location: join(304593..304855,304995..305063,305424..306049)
location: region:304593-306049:1
so has part: feature:304593-304855:1:exon
so has part: feature:304995-305063:1:exon
so has part: feature:305424-306049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304593-304855:1:exon

position:304855:1
position: 304855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:304995-305063:1:exon

position:304995:1
position: 304995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305063:1
position: 305063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:305424-306049:1:exon

position:305424:1
position: 305424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: MRPL17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L17, mitochondrial
translation: MRLSLAAAISHGRVHRRLGLGPRSRLDMLRNLVTALVRHERIETHWSRADEMRFYAERLIDYAKRGDTDEKAMRMADFWLTEKDLIHKLFKLLAPRFQSLSGNYTRLHQIPNRENLDRAKMAVIEYKGNPFPPLIVVRRANEKTLLNQLLKGYREDILKTRATQVPEGAADSLHSGTAV
SIO_010081: MRPL17
subclass of: SO_0000673
so part of: MRPL17
location: join(304682..304855,304995..305063,305424..305720)
location: region:304682-305720:1
so has part: feature:304682-304855:1:exon
so has part: feature:304995-305063:1:exon
so has part: feature:305424-305720:1:exon

XP_034644750.1
type: Protein
SIO_000068: ncbiprotein

position:304682:1
position: 304682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305720:1
position: 305720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304682-304855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:304995-305063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305424-305720:1:exon

ARHGEF39
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: ARHGEF39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(313824..386764)
location: region:313824-386764:-1
so has part: feature:313824-386764:-1:exon
subclass of: SO_0000010

117886435
type: Gene
SIO_000068: ncbigene

position:313824:-1
position: 313824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386764:-1
position: 386764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313824-386764:-1:exon

ARHGEF39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ARHGEF39
product: Rho guanine nucleotide exchange factor 39, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_034788224.1
SIO_010081: ARHGEF39
subclass of: SO_0000673
so part of: ARHGEF39
location: complement(join(313824..314266,314935..315051,315295..315383,318168..318397,333609..333679,336299..336417,346558..346678,348010..348104,356617..356802,386689..386764))
location: region:313824-386764:-1
so has part: feature:386689-386764:-1:exon
so has part: feature:356617-356802:-1:exon
so has part: feature:348010-348104:-1:exon
so has part: feature:346558-346678:-1:exon
so has part: feature:336299-336417:-1:exon
so has part: feature:333609-333679:-1:exon
so has part: feature:318168-318397:-1:exon
so has part: feature:315295-315383:-1:exon
so has part: feature:314935-315051:-1:exon
so has part: feature:313824-314266:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386689-386764:-1:exon

position:386689:-1
position: 386689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:356617-356802:-1:exon

position:356617:-1
position: 356617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356802:-1
position: 356802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:348010-348104:-1:exon

position:348010:-1
position: 348010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348104:-1
position: 348104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:346558-346678:-1:exon

position:346558:-1
position: 346558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346678:-1
position: 346678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:336299-336417:-1:exon

position:336299:-1
position: 336299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336417:-1
position: 336417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:333609-333679:-1:exon

position:333609:-1
position: 333609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333679:-1
position: 333679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:318168-318397:-1:exon

position:318168:-1
position: 318168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318397:-1
position: 318397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:315295-315383:-1:exon

position:315295:-1
position: 315295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315383:-1
position: 315383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:314935-315051:-1:exon

position:314935:-1
position: 314935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315051:-1
position: 315051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:313824-314266:-1:exon

position:314266:-1
position: 314266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGEF39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ARHGEF39
product: Rho guanine nucleotide exchange factor 39, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_034788223.1
SIO_010081: ARHGEF39
subclass of: SO_0000673
so part of: ARHGEF39
location: complement(join(313824..314266,314935..315051,315295..315383,318168..318397,328339..328467,333609..333679,336299..336417,346558..346678,348010..348104,356617..356802,386689..386764))
location: region:313824-386764:-1
so has part: feature:386689-386764:-1:exon
so has part: feature:356617-356802:-1:exon
so has part: feature:348010-348104:-1:exon
so has part: feature:346558-346678:-1:exon
so has part: feature:336299-336417:-1:exon
so has part: feature:333609-333679:-1:exon
so has part: feature:328339-328467:-1:exon
so has part: feature:318168-318397:-1:exon
so has part: feature:315295-315383:-1:exon
so has part: feature:314935-315051:-1:exon
so has part: feature:313824-314266:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386689-386764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356617-356802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348010-348104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346558-346678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336299-336417:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333609-333679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:328339-328467:-1:exon

position:328339:-1
position: 328339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328467:-1
position: 328467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:318168-318397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315295-315383:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314935-315051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313824-314266:-1:exon

ARHGEF39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ARHGEF39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 39 isoform X2
translation: MRGGAGRLWPGLVLLAEAQRAQGKISAVIPTLESIISIMLLQAVAAVNTVEEQRARWERKRSRTAKELVETEQKYLEQLDLVTTYFVTILKAKGTLQPAVREAIFGLLESIHCTSQILLLHLERGHLELGLEGFCQKLELYGHYAENLEQAKKTLQEQVKKNKAFCRFKKLQESRPEFLGWQLEDLLPLPLQRLHQYKHLFRDLMENTSPDSVEFQYLARRWYIQEGWLMVVPTKGEEAKRKMFFLFSDILVATKPCHPLHPLNSDKFSCQAVYPLSQCTVDKVFGHTQSQGGLLSLSFPHKTLLLMSSNQEDINNWYLNLTTAIRQLKASPTFVHQKEYLTEQPVSLRDAHTVQEMCQDF
SIO_010081: ARHGEF39
subclass of: SO_0000673
so part of: ARHGEF39
location: complement(join(314943..315051,315295..315383,318168..318397,333609..333679,336299..336417,346558..346678,348010..348104,356617..356802,386689..386754))
location: region:314943-386754:-1
so has part: feature:386689-386754:-1:exon
so has part: feature:356617-356802:-1:exon
so has part: feature:348010-348104:-1:exon
so has part: feature:346558-346678:-1:exon
so has part: feature:336299-336417:-1:exon
so has part: feature:333609-333679:-1:exon
so has part: feature:318168-318397:-1:exon
so has part: feature:315295-315383:-1:exon
so has part: feature:314943-315051:-1:exon

XP_034644115.1
type: Protein
SIO_000068: ncbiprotein

position:314943:-1
position: 314943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386754:-1
position: 386754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386689-386754:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356617-356802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348010-348104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346558-346678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336299-336417:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333609-333679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:318168-318397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:315295-315383:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:314943-315051:-1:exon

ARHGEF39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ARHGEF39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 39 isoform X1
translation: MRGGAGRLWPGLVLLAEAQRAQGKISAVIPTLESIISIMLLQAVAAVNTVEEQRARWERKRSRTAKELVETEQKYLEQLDLVTTYFVTILKAKGTLQPAVREAIFGLLESIHCTSQILLLHLERGHLELGLEGFCQKLELYGHYAENLEQAKKTLQEQVKKNKAFCRFKKLQESRPEFLGWQLEDLLPLPLQRLHQYKHLFRDLMENTSPDSVEFQYLAKAVKSVSEVSQWVHSTIRSHENSMQLLRVQKLLKGQKTKVLTPGRWYIQEGWLMVVPTKGEEAKRKMFFLFSDILVATKPCHPLHPLNSDKFSCQAVYPLSQCTVDKVFGHTQSQGGLLSLSFPHKTLLLMSSNQEDINNWYLNLTTAIRQLKASPTFVHQKEYLTEQPVSLRDAHTVQEMCQDF
SIO_010081: ARHGEF39
subclass of: SO_0000673
so part of: ARHGEF39
location: complement(join(314943..315051,315295..315383,318168..318397,328339..328467,333609..333679,336299..336417,346558..346678,348010..348104,356617..356802,386689..386754))
location: region:314943-386754:-1
so has part: feature:386689-386754:-1:exon
so has part: feature:356617-356802:-1:exon
so has part: feature:348010-348104:-1:exon
so has part: feature:346558-346678:-1:exon
so has part: feature:336299-336417:-1:exon
so has part: feature:333609-333679:-1:exon
so has part: feature:328339-328467:-1:exon
so has part: feature:318168-318397:-1:exon
so has part: feature:315295-315383:-1:exon
so has part: feature:314943-315051:-1:exon

XP_034644114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386689-386754:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356617-356802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348010-348104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346558-346678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336299-336417:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333609-333679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:328339-328467:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:318168-318397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315295-315383:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314943-315051:-1:exon

LOC117886627
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117886627
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 396281..511399
location: region:396281-511399:1
so has part: feature:396281-511399:1:exon
subclass of: SO_0000010

117886627
type: Gene
SIO_000068: ncbigene

position:396281:1
position: 396281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511399:1
position: 511399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396281-511399:1:exon

LOC117886627
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117886627
product: myosin-IIIb-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_034788617.1
SIO_010081: LOC117886627
subclass of: SO_0000673
so part of: LOC117886627
location: join(396281..396489,397101..397166,397919..398050,403596..403698,407925..408027,408112..408268,408821..408923,409206..409334,414198..414306,428135..428251,435365..435465,435858..435944,436178..436243,446696..446809,453124..453235,460301..460347,461163..461228,462356..462475,475938..476023,476305..476352,488377..488424,488623..488714,489403..489534,490542..490660,494796..494992,498063..498152,507245..507410,508083..508397,508838..508922,511011..511399)
location: region:396281-511399:1
so has part: feature:396281-396489:1:exon
so has part: feature:397101-397166:1:exon
so has part: feature:397919-398050:1:exon
so has part: feature:403596-403698:1:exon
so has part: feature:407925-408027:1:exon
so has part: feature:408112-408268:1:exon
so has part: feature:408821-408923:1:exon
so has part: feature:409206-409334:1:exon
so has part: feature:414198-414306:1:exon
so has part: feature:428135-428251:1:exon
so has part: feature:435365-435465:1:exon
so has part: feature:435858-435944:1:exon
so has part: feature:436178-436243:1:exon
so has part: feature:446696-446809:1:exon
so has part: feature:453124-453235:1:exon
so has part: feature:460301-460347:1:exon
so has part: feature:461163-461228:1:exon
so has part: feature:462356-462475:1:exon
so has part: feature:475938-476023:1:exon
so has part: feature:476305-476352:1:exon
so has part: feature:488377-488424:1:exon
so has part: feature:488623-488714:1:exon
so has part: feature:489403-489534:1:exon
so has part: feature:490542-490660:1:exon
so has part: feature:494796-494992:1:exon
so has part: feature:498063-498152:1:exon
so has part: feature:507245-507410:1:exon
so has part: feature:508083-508397:1:exon
so has part: feature:508838-508922:1:exon
so has part: feature:511011-511399:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:396281-396489:1:exon

position:396489:1
position: 396489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:397101-397166:1:exon

position:397101:1
position: 397101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397166:1
position: 397166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:397919-398050:1:exon

position:397919:1
position: 397919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398050:1
position: 398050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:403596-403698:1:exon

position:403596:1
position: 403596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403698:1
position: 403698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:407925-408027:1:exon

position:407925:1
position: 407925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408027:1
position: 408027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:408112-408268:1:exon

position:408112:1
position: 408112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408268:1
position: 408268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:408821-408923:1:exon

position:408821:1
position: 408821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408923:1
position: 408923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:409206-409334:1:exon

position:409206:1
position: 409206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409334:1
position: 409334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:414198-414306:1:exon

position:414198:1
position: 414198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414306:1
position: 414306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:428135-428251:1:exon

position:428135:1
position: 428135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428251:1
position: 428251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:435365-435465:1:exon

position:435365:1
position: 435365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435465:1
position: 435465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:435858-435944:1:exon

position:435858:1
position: 435858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435944:1
position: 435944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:436178-436243:1:exon

position:436178:1
position: 436178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436243:1
position: 436243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:446696-446809:1:exon

position:446696:1
position: 446696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446809:1
position: 446809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:453124-453235:1:exon

position:453124:1
position: 453124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453235:1
position: 453235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:460301-460347:1:exon

position:460301:1
position: 460301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460347:1
position: 460347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:461163-461228:1:exon

position:461163:1
position: 461163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461228:1
position: 461228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:462356-462475:1:exon

position:462356:1
position: 462356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462475:1
position: 462475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:475938-476023:1:exon

position:475938:1
position: 475938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476023:1
position: 476023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:476305-476352:1:exon

position:476305:1
position: 476305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476352:1
position: 476352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:488377-488424:1:exon

position:488377:1
position: 488377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488424:1
position: 488424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:488623-488714:1:exon

position:488623:1
position: 488623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488714:1
position: 488714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:489403-489534:1:exon

position:489403:1
position: 489403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489534:1
position: 489534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:490542-490660:1:exon

position:490542:1
position: 490542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490660:1
position: 490660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:494796-494992:1:exon

position:494796:1
position: 494796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494992:1
position: 494992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:498063-498152:1:exon

position:498063:1
position: 498063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498152:1
position: 498152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:507245-507410:1:exon

position:507245:1
position: 507245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507410:1
position: 507410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:508083-508397:1:exon

position:508083:1
position: 508083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508397:1
position: 508397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:508838-508922:1:exon

position:508838:1
position: 508838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508922:1
position: 508922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:511011-511399:1:exon

position:511011:1
position: 511011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117886627
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117886627
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin-IIIb-like
translation: MTRAPYPPHIFAIADRAYQAMLGHLATGPQNQCIVISGESGAGKTESVKLLLQHIMHLCKGNSQLEQQILQVNPLLEAFGNAQTVMNDNSSRFGKYMQLRFQRSTVRGAKLSEYLLEKSRVVQQDAGERNFHVFYYMFTGLTAEEKEMYGLLDPSLYRYISGWFRTEDVTECWKHKYWEMRNALDMVGFQEQEQVDMQAILAGVLSLGNVTFQSQENSGALRVSEASKGWLKASAGQFGVQEEELLKCLICKVSVTRGEQIQRFHTQQQAEDARDSIAKVAYGRVFGWIVRKINELLSENVDPEVELREIGILDIFGFENFVVNRFEQLCINLANEQLQHFFNYHIFQLEQAAYQEEGLPWEAITFNNNKPILDLFLAKPLGLLSLLDEQSAFPQATDKTFVDKLNSTFKGNSHFQLCRGHVLGFSIIHYAGKVQYASSGFLEKNRDTLPANIRGLFINSVTPLLSVLFTATVSRTGTLMPHIKAKVLPGTDNNFNNTRKQSVGAQFRHSLSVLMERMYSANPHFVRCIKPNSQKKPGMVDSQVVLEQLRYNGLLETIQIRRNGFSWRPSFEEFAERYRILLIKPDVPLTQESCLEILRSTELKGWRCGKSRLFFKYWHQELLAKSMDRLEKAAIIIQKTYKRFCCRKIYKELVVELRAREKHLQEEAERESNRQLELESQAQIASPVPVPRRRRPQPLPRSQPGADSLTQPPVPRPRSKLTESTPFDNFLRSRPCPVLGTEGQTGEEEEMRQIKRGATLRWFRDTQAWKVRQDDGAFPGWLHGMISRREAENLLMDKPLGCFLVRISQSRPGYTLSYRGESRCRHYMIEMQPNARYVILGEDRAHTSLTALVQYHRTVGIQPFMETLTVTCEQKGDGDSDYEELKFHTLAPCPADGEKQPQKEQADLNGAPAVSPIQHAGATAVLKHRRFMKSKKCQEQQLSPGEEGAEPSPCEAGVARRAIPRLYPSIRLAMREIQQFSSHASNGSYAELKPQH
SIO_010081: LOC117886627
subclass of: SO_0000673
so part of: LOC117886627
location: join(397941..398050,403596..403698,407925..408027,408112..408268,408821..408923,409206..409334,414198..414306,428135..428251,435365..435465,435858..435944,436178..436243,446696..446809,453124..453235,460301..460347,461163..461228,462356..462475,475938..476023,476305..476352,488377..488424,488623..488714,489403..489534,490542..490660,494796..494992,498063..498152,507245..507410,508083..508397,508838..508891)
location: region:397941-508891:1
so has part: feature:397941-398050:1:exon
so has part: feature:403596-403698:1:exon
so has part: feature:407925-408027:1:exon
so has part: feature:408112-408268:1:exon
so has part: feature:408821-408923:1:exon
so has part: feature:409206-409334:1:exon
so has part: feature:414198-414306:1:exon
so has part: feature:428135-428251:1:exon
so has part: feature:435365-435465:1:exon
so has part: feature:435858-435944:1:exon
so has part: feature:436178-436243:1:exon
so has part: feature:446696-446809:1:exon
so has part: feature:453124-453235:1:exon
so has part: feature:460301-460347:1:exon
so has part: feature:461163-461228:1:exon
so has part: feature:462356-462475:1:exon
so has part: feature:475938-476023:1:exon
so has part: feature:476305-476352:1:exon
so has part: feature:488377-488424:1:exon
so has part: feature:488623-488714:1:exon
so has part: feature:489403-489534:1:exon
so has part: feature:490542-490660:1:exon
so has part: feature:494796-494992:1:exon
so has part: feature:498063-498152:1:exon
so has part: feature:507245-507410:1:exon
so has part: feature:508083-508397:1:exon
so has part: feature:508838-508891:1:exon

XP_034644508.1
type: Protein
SIO_000068: ncbiprotein

position:397941:1
position: 397941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508891:1
position: 508891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397941-398050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403596-403698:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:407925-408027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:408112-408268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408821-408923:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:409206-409334:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414198-414306:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:428135-428251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:435365-435465:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:435858-435944:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:436178-436243:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:446696-446809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:453124-453235:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:460301-460347:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:461163-461228:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:462356-462475:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:475938-476023:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:476305-476352:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:488377-488424:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:488623-488714:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:489403-489534:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:490542-490660:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:494796-494992:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:498063-498152:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:507245-507410:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:508083-508397:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:508838-508891:1:exon

CA9
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: CA9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 608897..631066
location: region:608897-631066:1
so has part: feature:608897-631066:1:exon
subclass of: SO_0000010

117886732
type: Gene
SIO_000068: ncbigene

position:608897:1
position: 608897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631066:1
position: 631066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608897-631066:1:exon

CA9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CA9
product: carbonic anhydrase 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034788776.1
SIO_010081: CA9
subclass of: SO_0000673
so part of: CA9
location: join(608897..608974,609760..609985,610759..610929,613818..613960,615095..615187,615732..615798,616964..617121,617365..617506,622273..622347,625847..625921,629369..629392,629904..629939,630270..630363,630708..631066)
location: region:608897-631066:1
so has part: feature:608897-608974:1:exon
so has part: feature:609760-609985:1:exon
so has part: feature:610759-610929:1:exon
so has part: feature:613818-613960:1:exon
so has part: feature:615095-615187:1:exon
so has part: feature:615732-615798:1:exon
so has part: feature:616964-617121:1:exon
so has part: feature:617365-617506:1:exon
so has part: feature:622273-622347:1:exon
so has part: feature:625847-625921:1:exon
so has part: feature:629369-629392:1:exon
so has part: feature:629904-629939:1:exon
so has part: feature:630270-630363:1:exon
so has part: feature:630708-631066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:608897-608974:1:exon

position:608974:1
position: 608974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:609760-609985:1:exon

position:609760:1
position: 609760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609985:1
position: 609985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:610759-610929:1:exon

position:610759:1
position: 610759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610929:1
position: 610929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:613818-613960:1:exon

position:613818:1
position: 613818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613960:1
position: 613960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:615095-615187:1:exon

position:615095:1
position: 615095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615187:1
position: 615187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:615732-615798:1:exon

position:615732:1
position: 615732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615798:1
position: 615798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:616964-617121:1:exon

position:616964:1
position: 616964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617121:1
position: 617121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:617365-617506:1:exon

position:617365:1
position: 617365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617506:1
position: 617506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:622273-622347:1:exon

position:622273:1
position: 622273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622347:1
position: 622347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:625847-625921:1:exon

position:625847:1
position: 625847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625921:1
position: 625921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:629369-629392:1:exon

position:629369:1
position: 629369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629392:1
position: 629392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:629904-629939:1:exon

position:629904:1
position: 629904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629939:1
position: 629939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:630270-630363:1:exon

position:630270:1
position: 630270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630363:1
position: 630363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:630708-631066:1:exon

position:630708:1
position: 630708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CA9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CA9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 9
translation: MDPPEVVTHTHTCVFGHSSCSRTRTHHCLLAEQALVISLSGPEAASQCCAGKGFCANLEGASAGQQHPNALCSGQVPQERARGCLHCPFPRPHHHSGVKFRDKDEWQLEFRDCGGQMQSPINIDTNSTIFSRELQPVVLAGYNLDPSERLSLMNNGHTVVLRLPGSLTIASGYPQEYRAMQLHLHWGSPEGPGSEHTVDGRRYDGEIHVVYYNPSFDSIKEATRQPGGLAVLAAFLQVGPEDNVHYQPLLEQLHEVQEEGTETTVAGFNIEGLLPANLSRYYRYSGSLTTPPCYQTVNWTVFNQTVLLSKEQISLLETTLQGDDDKDLQNNFRLTQSLHGRKVLASFQASLSPRRVPLPDDGVPPVTPAPDGATERSTAEAPGSDGSDAPVTPVPEDTAGGSTDKAPEEGAGCPPCADSEKQLGFALQTAEVLAGLFGVLFAVTALAFLIYIYKQRSQNRRPDSHPKPNVIYTAATTDENAA
SIO_010081: CA9
subclass of: SO_0000673
so part of: CA9
location: join(608897..608974,609760..609985,610759..610929,613818..613960,615095..615187,615732..615798,616964..617121,617365..617506,622273..622347,625847..625921,629369..629392,629904..629939,630270..630363,630708..630774)
location: region:608897-630774:1
so has part: feature:608897-608974:1:exon
so has part: feature:609760-609985:1:exon
so has part: feature:610759-610929:1:exon
so has part: feature:613818-613960:1:exon
so has part: feature:615095-615187:1:exon
so has part: feature:615732-615798:1:exon
so has part: feature:616964-617121:1:exon
so has part: feature:617365-617506:1:exon
so has part: feature:622273-622347:1:exon
so has part: feature:625847-625921:1:exon
so has part: feature:629369-629392:1:exon
so has part: feature:629904-629939:1:exon
so has part: feature:630270-630363:1:exon
so has part: feature:630708-630774:1:exon

XP_034644667.1
type: Protein
SIO_000068: ncbiprotein

position:630774:1
position: 630774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608897-608974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609760-609985:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:610759-610929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613818-613960:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615095-615187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:615732-615798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:616964-617121:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:617365-617506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:622273-622347:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:625847-625921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:629369-629392:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:629904-629939:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630270-630363:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630708-630774:1:exon

LOC117886414
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117886414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(633112..661061)
location: region:633112-661061:-1
so has part: feature:633112-661061:-1:exon
subclass of: SO_0000010

117886414
type: Gene
SIO_000068: ncbigene

position:633112:-1
position: 633112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661061:-1
position: 661061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633112-661061:-1:exon

LOC117886414
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117886414
product: gamma-secretase subunit Aph-1b-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_034788180.1
SIO_010081: LOC117886414
subclass of: SO_0000673
so part of: LOC117886414
location: complement(join(633112..634172,634502..634625,635228..635355,638156..638278,638550..638623,650074..650244,660892..661010,661043..661061))
location: region:633112-661061:-1
so has part: feature:661043-661061:-1:exon
so has part: feature:660892-661010:-1:exon
so has part: feature:650074-650244:-1:exon
so has part: feature:638550-638623:-1:exon
so has part: feature:638156-638278:-1:exon
so has part: feature:635228-635355:-1:exon
so has part: feature:634502-634625:-1:exon
so has part: feature:633112-634172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:661043-661061:-1:exon

position:661043:-1
position: 661043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660892-661010:-1:exon

position:660892:-1
position: 660892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661010:-1
position: 661010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:650074-650244:-1:exon

position:650074:-1
position: 650074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650244:-1
position: 650244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:638550-638623:-1:exon

position:638550:-1
position: 638550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638623:-1
position: 638623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:638156-638278:-1:exon

position:638156:-1
position: 638156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638278:-1
position: 638278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:635228-635355:-1:exon

position:635228:-1
position: 635228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635355:-1
position: 635355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:634502-634625:-1:exon

position:634502:-1
position: 634502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634625:-1
position: 634625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:633112-634172:-1:exon

position:634172:-1
position: 634172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117886414
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117886414
product: gamma-secretase subunit Aph-1b-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_034788181.1
SIO_010081: LOC117886414
subclass of: SO_0000673
so part of: LOC117886414
location: complement(join(633112..634172,634502..634625,635228..635355,638156..638275,638550..638623,650074..650244,660892..661036))
location: region:633112-661036:-1
so has part: feature:660892-661036:-1:exon
so has part: feature:650074-650244:-1:exon
so has part: feature:638550-638623:-1:exon
so has part: feature:638156-638275:-1:exon
so has part: feature:635228-635355:-1:exon
so has part: feature:634502-634625:-1:exon
so has part: feature:633112-634172:-1:exon

position:661036:-1
position: 661036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660892-661036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:650074-650244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638550-638623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638156-638275:-1:exon

position:638275:-1
position: 638275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:635228-635355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:634502-634625:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:633112-634172:-1:exon

LOC117886414
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117886414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-secretase subunit Aph-1b-like isoform X2
translation: MTLAVFFGCTCIAFGPALGLVLFSVLRDPLRVIILIAGAFFWLVSLLLSSLVWFIAVKASDPGDEPLQKGLLIFGVLFSVLLQEAFRFLYYKLLRKAIEGLVALSEDGCSPISIQQMAYAGLGFGLMSGAFSMINLLADALGPGTVGIHGDSQLYFLTSAFMTMVMIFLHTFWGILFFHGCETQHWWEMAAVILTHLIVSGSTFWNPLYVGSLVPSYLLMFATGAWAYVLSGGCTQNLLQSLRGQQSETSPQLGS
SIO_010081: LOC117886414
subclass of: SO_0000673
so part of: LOC117886414
location: complement(join(634135..634172,634502..634625,635228..635355,638156..638275,638550..638623,650074..650244,660892..661004))
location: region:634135-661004:-1
so has part: feature:660892-661004:-1:exon
so has part: feature:650074-650244:-1:exon
so has part: feature:638550-638623:-1:exon
so has part: feature:638156-638275:-1:exon
so has part: feature:635228-635355:-1:exon
so has part: feature:634502-634625:-1:exon
so has part: feature:634135-634172:-1:exon

XP_034644072.1
type: Protein
SIO_000068: ncbiprotein

position:634135:-1
position: 634135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661004:-1
position: 661004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660892-661004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:650074-650244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638550-638623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638156-638275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635228-635355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:634502-634625:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:634135-634172:-1:exon

LOC117886414
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117886414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-secretase subunit Aph-1b-like isoform X1
translation: MTLAVFFGCTCIAFGPALGLVLFSVLRDPLRVIILIAGAFFWLVSLLLSSLVWFIAVKASDPGDEPLQKGLLIFGVLFSVLLQEAFRFLYYKLLRKAIEGLVALSEDGCSPISIQQMAYVAGLGFGLMSGAFSMINLLADALGPGTVGIHGDSQLYFLTSAFMTMVMIFLHTFWGILFFHGCETQHWWEMAAVILTHLIVSGSTFWNPLYVGSLVPSYLLMFATGAWAYVLSGGCTQNLLQSLRGQQSETSPQLGS
SIO_010081: LOC117886414
subclass of: SO_0000673
so part of: LOC117886414
location: complement(join(634135..634172,634502..634625,635228..635355,638156..638278,638550..638623,650074..650244,660892..661004))
location: region:634135-661004:-1
so has part: feature:660892-661004:-1:exon
so has part: feature:650074-650244:-1:exon
so has part: feature:638550-638623:-1:exon
so has part: feature:638156-638278:-1:exon
so has part: feature:635228-635355:-1:exon
so has part: feature:634502-634625:-1:exon
so has part: feature:634135-634172:-1:exon

XP_034644071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:660892-661004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:650074-650244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638550-638623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638156-638278:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635228-635355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:634502-634625:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:634135-634172:-1:exon

TPM2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: TPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(675182..703955)
location: region:675182-703955:-1
so has part: feature:675182-703955:-1:exon
subclass of: SO_0000010

117886478
type: Gene
SIO_000068: ncbigene

position:675182:-1
position: 675182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703955:-1
position: 703955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675182-703955:-1:exon

TPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TPM2
product: tropomyosin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_034788328.1
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(675182..675486,679714..679783,681035..681097,681317..681392,682777..682847,683395..683512,687123..687256,702797..702922,703745..703953))
location: region:675182-703953:-1
so has part: feature:703745-703953:-1:exon
so has part: feature:702797-702922:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:681317-681392:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:675182-675486:-1:exon

position:703953:-1
position: 703953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703745-703953:-1:exon

position:703745:-1
position: 703745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:702797-702922:-1:exon

position:702797:-1
position: 702797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702922:-1
position: 702922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:687123-687256:-1:exon

position:687123:-1
position: 687123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687256:-1
position: 687256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:683395-683512:-1:exon

position:683395:-1
position: 683395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683512:-1
position: 683512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:682777-682847:-1:exon

position:682777:-1
position: 682777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682847:-1
position: 682847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:681317-681392:-1:exon

position:681317:-1
position: 681317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681392:-1
position: 681392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:681035-681097:-1:exon

position:681035:-1
position: 681035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681097:-1
position: 681097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:679714-679783:-1:exon

position:679714:-1
position: 679714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679783:-1
position: 679783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:675182-675486:-1:exon

position:675486:-1
position: 675486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TPM2
product: tropomyosin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_034788326.1
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(675182..675486,679714..679783,681035..681097,682251..682326,682777..682847,683395..683512,687123..687256,702797..702922,703745..703950))
location: region:675182-703950:-1
so has part: feature:703745-703950:-1:exon
so has part: feature:702797-702922:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:682251-682326:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:675182-675486:-1:exon

position:703950:-1
position: 703950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703745-703950:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702797-702922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:682251-682326:-1:exon

position:682251:-1
position: 682251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682326:-1
position: 682326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:675182-675486:-1:exon

TPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TPM2
product: tropomyosin 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_034788333.1
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(675182..675486,679714..679783,681035..681097,681317..681392,682777..682847,683395..683512,687123..687256,695261..695648))
location: region:675182-695648:-1
so has part: feature:695261-695648:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:681317-681392:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:675182-675486:-1:exon

position:695648:-1
position: 695648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695261-695648:-1:exon

position:695261:-1
position: 695261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:681317-681392:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:675182-675486:-1:exon

TPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TPM2
product: tropomyosin 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_034788331.1
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(675182..675486,679714..679783,681035..681097,682251..682326,682777..682847,683395..683512,687123..687256,695261..695642))
location: region:675182-695642:-1
so has part: feature:695261-695642:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:682251-682326:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:675182-675486:-1:exon

position:695642:-1
position: 695642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695261-695642:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682251-682326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:675182-675486:-1:exon

TPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TPM2
product: tropomyosin 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_034788335.1
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(675182..675486,679714..679783,681035..681097,682251..682326,682777..682847,683395..683512,687123..687256,689251..689274))
location: region:675182-689274:-1
so has part: feature:689251-689274:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:682251-682326:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:675182-675486:-1:exon

position:689274:-1
position: 689274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689251-689274:-1:exon

position:689251:-1
position: 689251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682251-682326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:675182-675486:-1:exon

TPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain isoform X3
translation: MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQALQKKLKGTEDEVDKYSESVKEAQEKLEQAEKKAADAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADRKYEEVARKLVIIEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLTDKLKEAETRAEFAERSVAKLEKTIDDLEENLASAKEENVGIHQVLDQTLLELNNL
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(675404..675486,679714..679783,681035..681097,681317..681392,682777..682847,683395..683512,687123..687256,702797..702922,703745..703858))
location: region:675404-703858:-1
so has part: feature:703745-703858:-1:exon
so has part: feature:702797-702922:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:681317-681392:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:675404-675486:-1:exon

XP_034644219.1
type: Protein
SIO_000068: ncbiprotein

position:675404:-1
position: 675404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703858:-1
position: 703858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703745-703858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702797-702922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681317-681392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:675404-675486:-1:exon

TPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain isoform X1
translation: MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQALQKKLKGTEDEVDKYSESVKEAQEKLEQAEKKAADAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADRKYEEVARKLVIIEGELERSEERAEVAESRVRQLEEELRTMDQTLKSLMASEEEYSTKEDKYEEEIKLLTDKLKEAETRAEFAERSVAKLEKTIDDLEENLASAKEENVGIHQVLDQTLLELNNL
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(675404..675486,679714..679783,681035..681097,682251..682326,682777..682847,683395..683512,687123..687256,702797..702922,703745..703858))
location: region:675404-703858:-1
so has part: feature:703745-703858:-1:exon
so has part: feature:702797-702922:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:682251-682326:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:675404-675486:-1:exon

XP_034644217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:703745-703858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702797-702922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:682251-682326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:675404-675486:-1:exon

TPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain isoform X8
translation: MAGSTSIDAVKKKIQTLQQVADEAEERAEQLQREVDAERQARERAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADRKYEEVARKLVIIEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLTDKLKEAETRAEFAERSVAKLEKTIDDLEENLASAKEENVGIHQVLDQTLLELNNL
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(675404..675486,679714..679783,681035..681097,681317..681392,682777..682847,683395..683512,687123..687256,695261..695392))
location: region:675404-695392:-1
so has part: feature:695261-695392:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:681317-681392:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:675404-675486:-1:exon

XP_034644224.1
type: Protein
SIO_000068: ncbiprotein

position:695392:-1
position: 695392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695261-695392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:681317-681392:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:675404-675486:-1:exon

TPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain isoform X6
translation: MAGSTSIDAVKKKIQTLQQVADEAEERAEQLQREVDAERQARERAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADRKYEEVARKLVIIEGELERSEERAEVAESRVRQLEEELRTMDQTLKSLMASEEEYSTKEDKYEEEIKLLTDKLKEAETRAEFAERSVAKLEKTIDDLEENLASAKEENVGIHQVLDQTLLELNNL
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(675404..675486,679714..679783,681035..681097,682251..682326,682777..682847,683395..683512,687123..687256,695261..695392))
location: region:675404-695392:-1
so has part: feature:695261-695392:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:682251-682326:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:675404-675486:-1:exon

XP_034644222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:695261-695392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682251-682326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:675404-675486:-1:exon

TPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain isoform X10
translation: MKVIENRAMKDEEKMELQEMQLKEAKHIAEEADRKYEEVARKLVIIEGELERSEERAEVAESRVRQLEEELRTMDQTLKSLMASEEEYSTKEDKYEEEIKLLTDKLKEAETRAEFAERSVAKLEKTIDDLEENLASAKEENVGIHQVLDQTLLELNNL
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(675404..675486,679714..679783,681035..681097,682251..682326,682777..682847,683395..683508))
location: region:675404-683508:-1
so has part: feature:683395-683508:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:682251-682326:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:675404-675486:-1:exon

XP_034644226.1
type: Protein
SIO_000068: ncbiprotein

position:683508:-1
position: 683508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683395-683508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:682251-682326:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:675404-675486:-1:exon

TPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TPM2
product: tropomyosin 2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034788337.1
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(675500..677103,679714..679783,681035..681097,681317..681392,682777..682847,683395..683512,687123..687256,702797..702922,703745..703955))
location: region:675500-703955:-1
so has part: feature:703745-703955:-1:exon
so has part: feature:702797-702922:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:681317-681392:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:675500-677103:-1:exon

position:675500:-1
position: 675500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703745-703955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702797-702922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681317-681392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:675500-677103:-1:exon

position:677103:-1
position: 677103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TPM2
product: tropomyosin 2, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034788338.1
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(675500..677103,679714..679783,681035..681097,681317..681392,682777..682847,683395..683512,687123..687256,695261..695656))
location: region:675500-695656:-1
so has part: feature:695261-695656:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:681317-681392:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:675500-677103:-1:exon

position:695656:-1
position: 695656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695261-695656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:681317-681392:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:675500-677103:-1:exon

TPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TPM2
product: tropomyosin 2, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034788339.1
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(676368..677103,679714..679783,681035..681097,682251..682326,682777..682847,683395..683512,687123..687256,695261..695647))
location: region:676368-695647:-1
so has part: feature:695261-695647:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:682251-682326:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:676368-677103:-1:exon

position:676368:-1
position: 676368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695647:-1
position: 695647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695261-695647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682251-682326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:676368-677103:-1:exon

TPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain isoform X11
translation: MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQALQKKLKGTEDEVDKYSESVKEAQEKLEQAEKKAADAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADRKYEEVARKLVIIEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLTDKLKEAETRAEFAERSVAKLEKTIDDLEARSQQEAEKNRILTNELRVILNELNN
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(677024..677103,679714..679783,681035..681097,681317..681392,682777..682847,683395..683512,687123..687256,702797..702922,703745..703858))
location: region:677024-703858:-1
so has part: feature:703745-703858:-1:exon
so has part: feature:702797-702922:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:681317-681392:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:677024-677103:-1:exon

XP_034644228.1
type: Protein
SIO_000068: ncbiprotein

position:677024:-1
position: 677024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703745-703858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702797-702922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681317-681392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:677024-677103:-1:exon

TPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain isoform X12
translation: MAGSTSIDAVKKKIQTLQQVADEAEERAEQLQREVDAERQARERAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADRKYEEVARKLVIIEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLTDKLKEAETRAEFAERSVAKLEKTIDDLEARSQQEAEKNRILTNELRVILNELNN
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(677024..677103,679714..679783,681035..681097,681317..681392,682777..682847,683395..683512,687123..687256,695261..695392))
location: region:677024-695392:-1
so has part: feature:695261-695392:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:681317-681392:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:677024-677103:-1:exon

XP_034644229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:695261-695392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:681317-681392:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:677024-677103:-1:exon

TPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain isoform X13
translation: MAGSTSIDAVKKKIQTLQQVADEAEERAEQLQREVDAERQARERAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADRKYEEVARKLVIIEGELERSEERAEVAESRVRQLEEELRTMDQTLKSLMASEEEYSTKEDKYEEEIKLLTDKLKEAETRAEFAERSVAKLEKTIDDLEARSQQEAEKNRILTNELRVILNELNN
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(677024..677103,679714..679783,681035..681097,682251..682326,682777..682847,683395..683512,687123..687256,695261..695392))
location: region:677024-695392:-1
so has part: feature:695261-695392:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:682251-682326:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:677024-677103:-1:exon

XP_034644230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:695261-695392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682251-682326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:677024-677103:-1:exon

TPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TPM2
product: tropomyosin 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034788330.1
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(677860..678475,679714..679783,681035..681097,682251..682326,682777..682847,683395..683512,687123..687256,702797..702922,703745..703952))
location: region:677860-703952:-1
so has part: feature:703745-703952:-1:exon
so has part: feature:702797-702922:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:682251-682326:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:677860-678475:-1:exon

position:677860:-1
position: 677860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703952:-1
position: 703952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703745-703952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702797-702922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:682251-682326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:677860-678475:-1:exon

position:678475:-1
position: 678475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain isoform X5
translation: MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQALQKKLKGTEDEVDKYSESVKEAQEKLEQAEKKAADAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADRKYEEVARKLVIIEGELERSEERAEVAESRVRQLEEELRTMDQTLKSLMASEEEYSTKEDKYEEEIKLLTDKLKEAETRAEFAERSVAKLEKTIDDLEEPLVPKVK
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(678450..678475,679714..679783,681035..681097,682251..682326,682777..682847,683395..683512,687123..687256,702797..702922,703745..703858))
location: region:678450-703858:-1
so has part: feature:703745-703858:-1:exon
so has part: feature:702797-702922:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:682251-682326:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:678450-678475:-1:exon

XP_034644221.1
type: Protein
SIO_000068: ncbiprotein

position:678450:-1
position: 678450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703745-703858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702797-702922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:682251-682326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:678450-678475:-1:exon

TPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TPM2
product: tropomyosin 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034788329.1
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(678493..679125,679714..679783,681035..681097,681317..681392,682777..682847,683395..683512,687123..687256,702797..702922,703745..703955))
location: region:678493-703955:-1
so has part: feature:703745-703955:-1:exon
so has part: feature:702797-702922:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:681317-681392:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:678493-679125:-1:exon

position:678493:-1
position: 678493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703745-703955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702797-702922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681317-681392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:678493-679125:-1:exon

position:679125:-1
position: 679125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TPM2
product: tropomyosin 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_034788334.1
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(678495..679125,679714..679783,681035..681097,681317..681392,682777..682847,683395..683512,687123..687256,695261..695656))
location: region:678495-695656:-1
so has part: feature:695261-695656:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:681317-681392:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:678495-679125:-1:exon

position:678495:-1
position: 678495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695261-695656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:681317-681392:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:678495-679125:-1:exon

TPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TPM2
product: tropomyosin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_034788327.1
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(678499..679125,679714..679783,681035..681097,682251..682326,682777..682847,683395..683512,687123..687256,702797..702922,703745..703952))
location: region:678499-703952:-1
so has part: feature:703745-703952:-1:exon
so has part: feature:702797-702922:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:682251-682326:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:678499-679125:-1:exon

position:678499:-1
position: 678499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703745-703952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702797-702922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:682251-682326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:678499-679125:-1:exon

TPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TPM2
product: tropomyosin 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_034788332.1
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(678501..679125,679714..679783,681035..681097,682251..682326,682777..682847,683395..683512,687123..687256,695261..695647))
location: region:678501-695647:-1
so has part: feature:695261-695647:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:682251-682326:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:678501-679125:-1:exon

position:678501:-1
position: 678501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695261-695647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682251-682326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:678501-679125:-1:exon

TPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain isoform X4
translation: MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQALQKKLKGTEDEVDKYSESVKEAQEKLEQAEKKAADAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADRKYEEVARKLVIIEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLTDKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDITSL
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(679043..679125,679714..679783,681035..681097,681317..681392,682777..682847,683395..683512,687123..687256,702797..702922,703745..703858))
location: region:679043-703858:-1
so has part: feature:703745-703858:-1:exon
so has part: feature:702797-702922:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:681317-681392:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:679043-679125:-1:exon

XP_034644220.1
type: Protein
SIO_000068: ncbiprotein

position:679043:-1
position: 679043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703745-703858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702797-702922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681317-681392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679043-679125:-1:exon

TPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain isoform X2
translation: MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQALQKKLKGTEDEVDKYSESVKEAQEKLEQAEKKAADAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADRKYEEVARKLVIIEGELERSEERAEVAESRVRQLEEELRTMDQTLKSLMASEEEYSTKEDKYEEEIKLLTDKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDITSL
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(679043..679125,679714..679783,681035..681097,682251..682326,682777..682847,683395..683512,687123..687256,702797..702922,703745..703858))
location: region:679043-703858:-1
so has part: feature:703745-703858:-1:exon
so has part: feature:702797-702922:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:682251-682326:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:679043-679125:-1:exon

XP_034644218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:703745-703858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702797-702922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:682251-682326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679043-679125:-1:exon

TPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain isoform X9
translation: MAGSTSIDAVKKKIQTLQQVADEAEERAEQLQREVDAERQARERAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADRKYEEVARKLVIIEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLTDKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDITSL
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(679043..679125,679714..679783,681035..681097,681317..681392,682777..682847,683395..683512,687123..687256,695261..695392))
location: region:679043-695392:-1
so has part: feature:695261-695392:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:681317-681392:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:679043-679125:-1:exon

XP_034644225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:695261-695392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:681317-681392:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679043-679125:-1:exon

TPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain isoform X7
translation: MAGSTSIDAVKKKIQTLQQVADEAEERAEQLQREVDAERQARERAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADRKYEEVARKLVIIEGELERSEERAEVAESRVRQLEEELRTMDQTLKSLMASEEEYSTKEDKYEEEIKLLTDKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDITSL
SIO_010081: TPM2
subclass of: SO_0000673
so part of: TPM2
location: complement(join(679043..679125,679714..679783,681035..681097,682251..682326,682777..682847,683395..683512,687123..687256,695261..695392))
location: region:679043-695392:-1
so has part: feature:695261-695392:-1:exon
so has part: feature:687123-687256:-1:exon
so has part: feature:683395-683512:-1:exon
so has part: feature:682777-682847:-1:exon
so has part: feature:682251-682326:-1:exon
so has part: feature:681035-681097:-1:exon
so has part: feature:679714-679783:-1:exon
so has part: feature:679043-679125:-1:exon

XP_034644223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:695261-695392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687123-687256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683395-683512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682777-682847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682251-682326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681035-681097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679714-679783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:679043-679125:-1:exon

TLN1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: TLN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(740040..869031)
location: region:740040-869031:-1
so has part: feature:740040-869031:-1:exon
subclass of: SO_0000010

117886387
type: Gene
SIO_000068: ncbigene

position:740040:-1
position: 740040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869031:-1
position: 869031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740040-869031:-1:exon

TLN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TLN1
product: talin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034788117.1
SIO_010081: TLN1
subclass of: SO_0000673
so part of: TLN1
location: complement(join(740040..741207,742356..742484,743734..743916,744376..744438,750331..750456,750866..750990,754163..754268,755715..755717,758477..758584,759002..759187,759761..759877,761100..761225,761390..761573,763586..763752,764332..764478,764823..764942,765166..765267,766782..766931,767837..768007,768178..768279,769176..769308,770106..770287,770761..770901,771073..771234,772142..772285,772602..772724,773814..773903,774272..774365,776886..777025,777890..778087,778684..778803,779235..779443,779915..780017,780245..780373,780487..780621,780887..781000,783647..783760,785151..785279,786558..786724,787211..787505,788056..788223,789604..789654,789897..789995,790104..790312,790810..790918,791494..791607,792607..792787,798434..798510,799291..799392,799833..799988,800257..800361,800880..800940,801363..801490,806734..806876,807155..807307,807664..807793,808232..808329,826901..827064,869013..869031))
location: region:740040-869031:-1
so has part: feature:869013-869031:-1:exon
so has part: feature:826901-827064:-1:exon
so has part: feature:808232-808329:-1:exon
so has part: feature:807664-807793:-1:exon
so has part: feature:807155-807307:-1:exon
so has part: feature:806734-806876:-1:exon
so has part: feature:801363-801490:-1:exon
so has part: feature:800880-800940:-1:exon
so has part: feature:800257-800361:-1:exon
so has part: feature:799833-799988:-1:exon
so has part: feature:799291-799392:-1:exon
so has part: feature:798434-798510:-1:exon
so has part: feature:792607-792787:-1:exon
so has part: feature:791494-791607:-1:exon
so has part: feature:790810-790918:-1:exon
so has part: feature:790104-790312:-1:exon
so has part: feature:789897-789995:-1:exon
so has part: feature:789604-789654:-1:exon
so has part: feature:788056-788223:-1:exon
so has part: feature:787211-787505:-1:exon
so has part: feature:786558-786724:-1:exon
so has part: feature:785151-785279:-1:exon
so has part: feature:783647-783760:-1:exon
so has part: feature:780887-781000:-1:exon
so has part: feature:780487-780621:-1:exon
so has part: feature:780245-780373:-1:exon
so has part: feature:779915-780017:-1:exon
so has part: feature:779235-779443:-1:exon
so has part: feature:778684-778803:-1:exon
so has part: feature:777890-778087:-1:exon
so has part: feature:776886-777025:-1:exon
so has part: feature:774272-774365:-1:exon
so has part: feature:773814-773903:-1:exon
so has part: feature:772602-772724:-1:exon
so has part: feature:772142-772285:-1:exon
so has part: feature:771073-771234:-1:exon
so has part: feature:770761-770901:-1:exon
so has part: feature:770106-770287:-1:exon
so has part: feature:769176-769308:-1:exon
so has part: feature:768178-768279:-1:exon
so has part: feature:767837-768007:-1:exon
so has part: feature:766782-766931:-1:exon
so has part: feature:765166-765267:-1:exon
so has part: feature:764823-764942:-1:exon
so has part: feature:764332-764478:-1:exon
so has part: feature:763586-763752:-1:exon
so has part: feature:761390-761573:-1:exon
so has part: feature:761100-761225:-1:exon
so has part: feature:759761-759877:-1:exon
so has part: feature:759002-759187:-1:exon
so has part: feature:758477-758584:-1:exon
so has part: feature:755715-755717:-1:exon
so has part: feature:754163-754268:-1:exon
so has part: feature:750866-750990:-1:exon
so has part: feature:750331-750456:-1:exon
so has part: feature:744376-744438:-1:exon
so has part: feature:743734-743916:-1:exon
so has part: feature:742356-742484:-1:exon
so has part: feature:740040-741207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:869013-869031:-1:exon

position:869013:-1
position: 869013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:826901-827064:-1:exon

position:826901:-1
position: 826901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827064:-1
position: 827064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:808232-808329:-1:exon

position:808232:-1
position: 808232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808329:-1
position: 808329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:807664-807793:-1:exon

position:807664:-1
position: 807664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807793:-1
position: 807793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:807155-807307:-1:exon

position:807155:-1
position: 807155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807307:-1
position: 807307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:806734-806876:-1:exon

position:806734:-1
position: 806734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806876:-1
position: 806876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:801363-801490:-1:exon

position:801363:-1
position: 801363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801490:-1
position: 801490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:800880-800940:-1:exon

position:800880:-1
position: 800880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800940:-1
position: 800940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:800257-800361:-1:exon

position:800257:-1
position: 800257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800361:-1
position: 800361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:799833-799988:-1:exon

position:799833:-1
position: 799833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799988:-1
position: 799988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:799291-799392:-1:exon

position:799291:-1
position: 799291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799392:-1
position: 799392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:798434-798510:-1:exon

position:798434:-1
position: 798434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798510:-1
position: 798510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:792607-792787:-1:exon

position:792607:-1
position: 792607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792787:-1
position: 792787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:791494-791607:-1:exon

position:791494:-1
position: 791494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791607:-1
position: 791607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:790810-790918:-1:exon

position:790810:-1
position: 790810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790918:-1
position: 790918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:790104-790312:-1:exon

position:790104:-1
position: 790104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790312:-1
position: 790312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:789897-789995:-1:exon

position:789897:-1
position: 789897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789995:-1
position: 789995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:789604-789654:-1:exon

position:789604:-1
position: 789604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789654:-1
position: 789654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:788056-788223:-1:exon

position:788056:-1
position: 788056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788223:-1
position: 788223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:787211-787505:-1:exon

position:787211:-1
position: 787211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787505:-1
position: 787505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:786558-786724:-1:exon

position:786558:-1
position: 786558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786724:-1
position: 786724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:785151-785279:-1:exon

position:785151:-1
position: 785151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785279:-1
position: 785279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:783647-783760:-1:exon

position:783647:-1
position: 783647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783760:-1
position: 783760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:780887-781000:-1:exon

position:780887:-1
position: 780887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781000:-1
position: 781000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:780487-780621:-1:exon

position:780487:-1
position: 780487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780621:-1
position: 780621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:780245-780373:-1:exon

position:780245:-1
position: 780245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780373:-1
position: 780373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:779915-780017:-1:exon

position:779915:-1
position: 779915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780017:-1
position: 780017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:779235-779443:-1:exon

position:779235:-1
position: 779235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779443:-1
position: 779443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:778684-778803:-1:exon

position:778684:-1
position: 778684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778803:-1
position: 778803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:777890-778087:-1:exon

position:777890:-1
position: 777890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778087:-1
position: 778087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:776886-777025:-1:exon

position:776886:-1
position: 776886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777025:-1
position: 777025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:774272-774365:-1:exon

position:774272:-1
position: 774272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774365:-1
position: 774365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:773814-773903:-1:exon

position:773814:-1
position: 773814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773903:-1
position: 773903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:772602-772724:-1:exon

position:772602:-1
position: 772602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772724:-1
position: 772724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:772142-772285:-1:exon

position:772142:-1
position: 772142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772285:-1
position: 772285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:771073-771234:-1:exon

position:771073:-1
position: 771073
reference: sequence
type: ReverseStrandPosition
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position:771234:-1
position: 771234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:770761-770901:-1:exon

position:770761:-1
position: 770761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770901:-1
position: 770901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:770106-770287:-1:exon

position:770106:-1
position: 770106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770287:-1
position: 770287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:769176-769308:-1:exon

position:769176:-1
position: 769176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769308:-1
position: 769308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:768178-768279:-1:exon

position:768178:-1
position: 768178
reference: sequence
type: ReverseStrandPosition
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position:768279:-1
position: 768279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:767837-768007:-1:exon

position:767837:-1
position: 767837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768007:-1
position: 768007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:766782-766931:-1:exon

position:766782:-1
position: 766782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766931:-1
position: 766931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:765166-765267:-1:exon

position:765166:-1
position: 765166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765267:-1
position: 765267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:764823-764942:-1:exon

position:764823:-1
position: 764823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764942:-1
position: 764942
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 45
SIO_000628: feature:764332-764478:-1:exon

position:764332:-1
position: 764332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764478:-1
position: 764478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:763586-763752:-1:exon

position:763586:-1
position: 763586
reference: sequence
type: ReverseStrandPosition
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position:763752:-1
position: 763752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:761390-761573:-1:exon

position:761390:-1
position: 761390
reference: sequence
type: ReverseStrandPosition
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position:761573:-1
position: 761573
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 48
SIO_000628: feature:761100-761225:-1:exon

position:761100:-1
position: 761100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761225:-1
position: 761225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:759761-759877:-1:exon

position:759761:-1
position: 759761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759877:-1
position: 759877
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 50
SIO_000628: feature:759002-759187:-1:exon

position:759002:-1
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reference: sequence
type: ReverseStrandPosition
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position:759187:-1
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reference: sequence
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urn:…
SIO_000300: 51
SIO_000628: feature:758477-758584:-1:exon

position:758477:-1
position: 758477
reference: sequence
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position:758584:-1
position: 758584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:755715-755717:-1:exon

position:755715:-1
position: 755715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755717:-1
position: 755717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:754163-754268:-1:exon

position:754163:-1
position: 754163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754268:-1
position: 754268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:750866-750990:-1:exon

position:750866:-1
position: 750866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750990:-1
position: 750990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:750331-750456:-1:exon

position:750331:-1
position: 750331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750456:-1
position: 750456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:744376-744438:-1:exon

position:744376:-1
position: 744376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744438:-1
position: 744438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:743734-743916:-1:exon

position:743734:-1
position: 743734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743916:-1
position: 743916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:742356-742484:-1:exon

position:742356:-1
position: 742356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742484:-1
position: 742484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 59
SIO_000628: feature:740040-741207:-1:exon

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TLN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TLN1
product: talin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034788119.1
SIO_010081: TLN1
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TLN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TLN1
product: talin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_034788118.1
SIO_010081: TLN1
subclass of: SO_0000673
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TLN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TLN1
product: talin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034788116.1
SIO_010081: TLN1
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TLN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TLN1
product: talin 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034788121.1
SIO_010081: TLN1
subclass of: SO_0000673
so part of: TLN1
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position:812068:-1
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type: ReverseStrandPosition
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TLN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TLN1
product: talin 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_034788120.1
SIO_010081: TLN1
subclass of: SO_0000673
so part of: TLN1
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so has part: feature:800880-800940:-1:exon
so has part: feature:800257-800361:-1:exon
so has part: feature:799833-799988:-1:exon
so has part: feature:799291-799392:-1:exon
so has part: feature:798434-798510:-1:exon
so has part: feature:792607-792787:-1:exon
so has part: feature:791494-791607:-1:exon
so has part: feature:790810-790918:-1:exon
so has part: feature:790104-790312:-1:exon
so has part: feature:789897-789995:-1:exon
so has part: feature:788056-788223:-1:exon
so has part: feature:787211-787505:-1:exon
so has part: feature:786558-786724:-1:exon
so has part: feature:785151-785279:-1:exon
so has part: feature:783647-783760:-1:exon
so has part: feature:780887-781000:-1:exon
so has part: feature:780487-780621:-1:exon
so has part: feature:780245-780373:-1:exon
so has part: feature:779915-780017:-1:exon
so has part: feature:779235-779443:-1:exon
so has part: feature:778684-778803:-1:exon
so has part: feature:777890-778087:-1:exon
so has part: feature:776886-777025:-1:exon
so has part: feature:774272-774365:-1:exon
so has part: feature:773814-773903:-1:exon
so has part: feature:772602-772724:-1:exon
so has part: feature:772142-772285:-1:exon
so has part: feature:771073-771234:-1:exon
so has part: feature:770761-770901:-1:exon
so has part: feature:770106-770287:-1:exon
so has part: feature:769176-769308:-1:exon
so has part: feature:768178-768279:-1:exon
so has part: feature:767837-768007:-1:exon
so has part: feature:766782-766931:-1:exon
so has part: feature:765166-765267:-1:exon
so has part: feature:764823-764942:-1:exon
so has part: feature:764332-764478:-1:exon
so has part: feature:763586-763752:-1:exon
so has part: feature:761390-761573:-1:exon
so has part: feature:761100-761225:-1:exon
so has part: feature:759761-759877:-1:exon
so has part: feature:759002-759187:-1:exon
so has part: feature:758477-758584:-1:exon
so has part: feature:754163-754268:-1:exon
so has part: feature:750866-750990:-1:exon
so has part: feature:750331-750456:-1:exon
so has part: feature:744376-744438:-1:exon
so has part: feature:743734-743916:-1:exon
so has part: feature:742356-742484:-1:exon
so has part: feature:741076-741207:-1:exon

position:741076:-1
position: 741076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827030:-1
position: 827030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826901-827030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808232-808329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807664-807793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:807155-807307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806734-806876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:801363-801490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800880-800940:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800257-800361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:799833-799988:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:799291-799392:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:798434-798510:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:792607-792787:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:791494-791607:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790810-790918:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:790104-790312:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:789897-789995:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:788056-788223:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:787211-787505:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:786558-786724:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:785151-785279:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:783647-783760:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:780887-781000:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:780487-780621:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:780245-780373:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:779915-780017:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:779235-779443:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:778684-778803:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:777890-778087:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:776886-777025:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:774272-774365:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:773814-773903:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:772602-772724:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:772142-772285:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:771073-771234:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:770761-770901:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:770106-770287:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:769176-769308:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:768178-768279:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:767837-768007:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:766782-766931:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:765166-765267:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:764823-764942:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:764332-764478:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:763586-763752:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:761390-761573:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:761100-761225:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:759761-759877:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:759002-759187:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:758477-758584:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:754163-754268:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:750866-750990:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:750331-750456:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:744376-744438:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:743734-743916:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:742356-742484:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:741076-741207:-1:exon

TLN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TLN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin-1 isoform X4
translation: MVALSLKISIGNVVKTMQFEPSTMVYDACRIIRERVPEAQMGQPSDFGLFLSDEDPKKGIWLEAGKALDYYMLRNGDTMEYKKKQRPLKIRMLDGTVKTVMVDDSKTVTDILMTICARIGITNHDEYSLVREMMEEKKEEITGTLKKDKTLLRDEKKMEKLKQKLHTDDELNWLDHGRTLREQGIDDSETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKPGFLDLKDFLPKEYIKQKGERKIFMAHKNCSNMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWNLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTMLEDSVSPKKSTVLQQQFNRVGKVEHGSVALPAIMRSGAGGPENFQVGTMPQAQQQITSGQMHRGHMPPLTSAQQALTGTINSSMQAVHAAQATLDDFETLPPLGQDAASKAWRKNKMDESKHEIHSQVDAITAGTASVVNLTAGDPADTDYTAVGCAVTTISSNLTEMSKGVKLLAALMEDEGGNGRQLLQAAKNLASAVSDLLKTAQPASVEPRQNLLQAAGSVGQTSGELLQQIGESDTDPRFQDMLMQLAKAVASAAAALVLKAKNVAQKTEDSALQTQVIAAATQCALSTSQLVACTKVVAPTISSPVCQEQLIEAGKLVAKSAEGCVEASQAATNDDQLLKQVGVAATAVTQALNDLLQHIKQHATGGQPIGRYDQATDTILNVTENIFSSMGDAGEMVRQARILAQATSDLVNAIKADAEGETDLENSRKLLSAAKMLADATAKMVEAAKGAAAHPDSEEQQQRLREAAEGLRIATNAAAQNAIKKKLVHKLEHTAKQAAASATQTIAAAQHAAASNKNPAAQQQLVQSCKVVADQIPMLVQGVRGSQSQPDSPSAQLALIAASQNFLQPGGKMVAAAKATVPTIADQASAMQLSQCAKNLAAALAELRTAAQKAQETCGPLEIDTALSMVQSLERDLQEAKAAARDGKLKPLPGETMEKCAQDLGNSTKAVSSAIAQLLGEVAQGNENYTGIAARDVAQALRSLSQAARGVAANTSDPQVQSAMLECAGDVMDKAGNLIEEARKGVGKPGDPESQQRLAQVAKAVSQALNRCVNCLPGQRDVDAAIRTVSEASKKLLAESLPPSTKSFQEAQSQLNQAAAGLNQSANELVQASRGTPQDLARSSGKFGQDFNEFLEAGVEMAGQSPNKEDQAQVVSNLKSISMSSSKLLLAAKALSADPAAPNLKNQLAAAARAVTDSINQLITMCTQQAPGQKECDNALRELETVRELLENPTQAVNDMSYFNCLDSVMENSKVLGEAMAGISQHAKNSKLLEFGESVSTASKALCGFTEAAAQAAYLVAVSDPNSQAGQQGLVDPTQFARANQAIQMACQNLVDPACTQSQVLSAATIVAKHTSALCNTCRLASSRTANPVAKRQFVQSAKEVANSTANLVKTIKALDGAFNEDNRERCRAATAPLIEAVDNLTAFASNPEFATIPAQISPEGRRAMEPIVTSAKTMLESSAGLIQTARSLAVNPKDPPKWSVLAGHSRTVSDSIKKLITNMRDKAPGQRECDEAIEVLNKCMRDVDQASLAAISQQLAPREGISQEALHNQMITAVQEISNLIEPVASAARAEASQLGHKVSQMAQYFEPLILAAVGAASKTLNHQQQMNLLDQTKTLSESALQMLYTAKEAGGNPKQAAHTQEALEEAVQMMKEAVEDLTTTLNEAASAAGVVGGMVDSITQAINQLDEGPMGEPEGTFVDYQTTMVKTAKAIAVTVQEMVTKSTTNPDELGTLANQLTSDYGQLAHQAKPAAITAENDEIGSHIKNRVQELGHGCAALVTKAGALQCSPSDAYTKKELIECARKVSEKVSHVLAALQAGNRGTQACITAASAVSGIIADLDTTIMFATA…
SIO_010081: TLN1
subclass of: SO_0000673
so part of: TLN1
location: complement(join(741076..741207,742356..742484,743734..743916,744376..744438,750331..750456,750866..750990,754163..754268,758477..758584,759002..759187,759761..759877,761100..761225,761390..761573,763586..763752,764332..764478,764823..764942,765166..765267,766782..766931,767837..768007,768178..768279,769176..769308,770106..770287,770761..770901,771073..771234,772142..772285,772602..772724,773814..773903,774272..774365,776886..777025,777890..778087,778684..778803,779235..779443,779915..780017,780245..780373,780487..780621,780887..781000,783647..783760,785151..785279,786558..786724,787211..787505,788056..788223,789897..789995,790104..790312,790810..790918,791494..791607,792607..792787,798434..798510,799291..799392,799833..799988,800257..800361,800880..800940,801363..801490,806734..806876,807155..807307,807664..807793,808232..808329,826901..827030))
location: region:741076-827030:-1
so has part: feature:826901-827030:-1:exon
so has part: feature:808232-808329:-1:exon
so has part: feature:807664-807793:-1:exon
so has part: feature:807155-807307:-1:exon
so has part: feature:806734-806876:-1:exon
so has part: feature:801363-801490:-1:exon
so has part: feature:800880-800940:-1:exon
so has part: feature:800257-800361:-1:exon
so has part: feature:799833-799988:-1:exon
so has part: feature:799291-799392:-1:exon
so has part: feature:798434-798510:-1:exon
so has part: feature:792607-792787:-1:exon
so has part: feature:791494-791607:-1:exon
so has part: feature:790810-790918:-1:exon
so has part: feature:790104-790312:-1:exon
so has part: feature:789897-789995:-1:exon
so has part: feature:788056-788223:-1:exon
so has part: feature:787211-787505:-1:exon
so has part: feature:786558-786724:-1:exon
so has part: feature:785151-785279:-1:exon
so has part: feature:783647-783760:-1:exon
so has part: feature:780887-781000:-1:exon
so has part: feature:780487-780621:-1:exon
so has part: feature:780245-780373:-1:exon
so has part: feature:779915-780017:-1:exon
so has part: feature:779235-779443:-1:exon
so has part: feature:778684-778803:-1:exon
so has part: feature:777890-778087:-1:exon
so has part: feature:776886-777025:-1:exon
so has part: feature:774272-774365:-1:exon
so has part: feature:773814-773903:-1:exon
so has part: feature:772602-772724:-1:exon
so has part: feature:772142-772285:-1:exon
so has part: feature:771073-771234:-1:exon
so has part: feature:770761-770901:-1:exon
so has part: feature:770106-770287:-1:exon
so has part: feature:769176-769308:-1:exon
so has part: feature:768178-768279:-1:exon
so has part: feature:767837-768007:-1:exon
so has part: feature:766782-766931:-1:exon
so has part: feature:765166-765267:-1:exon
so has part: feature:764823-764942:-1:exon
so has part: feature:764332-764478:-1:exon
so has part: feature:763586-763752:-1:exon
so has part: feature:761390-761573:-1:exon
so has part: feature:761100-761225:-1:exon
so has part: feature:759761-759877:-1:exon
so has part: feature:759002-759187:-1:exon
so has part: feature:758477-758584:-1:exon
so has part: feature:754163-754268:-1:exon
so has part: feature:750866-750990:-1:exon
so has part: feature:750331-750456:-1:exon
so has part: feature:744376-744438:-1:exon
so has part: feature:743734-743916:-1:exon
so has part: feature:742356-742484:-1:exon
so has part: feature:741076-741207:-1:exon

XP_034644011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:826901-827030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808232-808329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807664-807793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:807155-807307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806734-806876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:801363-801490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800880-800940:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800257-800361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:799833-799988:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:799291-799392:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:798434-798510:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:792607-792787:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:791494-791607:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790810-790918:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:790104-790312:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:789897-789995:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:788056-788223:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:787211-787505:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:786558-786724:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:785151-785279:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:783647-783760:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:780887-781000:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:780487-780621:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:780245-780373:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:779915-780017:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:779235-779443:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:778684-778803:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:777890-778087:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:776886-777025:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:774272-774365:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:773814-773903:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:772602-772724:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:772142-772285:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:771073-771234:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:770761-770901:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:770106-770287:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:769176-769308:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:768178-768279:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:767837-768007:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:766782-766931:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:765166-765267:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:764823-764942:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:764332-764478:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:763586-763752:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:761390-761573:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:761100-761225:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:759761-759877:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:759002-759187:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:758477-758584:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:754163-754268:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:750866-750990:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:750331-750456:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:744376-744438:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:743734-743916:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:742356-742484:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:741076-741207:-1:exon

TLN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TLN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin-1 isoform X3
translation: MVALSLKISIGNVVKTMQFEPSTMVYDACRIIRERVPEAQMGQPSDFGLFLSDEDPKKGIWLEAGKALDYYMLRNGDTMEYKKKQRPLKIRMLDGTVKTVMVDDSKTVTDILMTICARIGITNHDEYSLVREMMEEKKEEITGTLKKDKTLLRDEKKMEKLKQKLHTDDELNWLDHGRTLREQGIDDSETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKPGFLDLKDFLPKEYIKQKGERKIFMAHKNCSNMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWNLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTMLEDSVSPKKSTVLQQQFNRVGKVEHGSVALPAIMRSGAGGPENFQVGTMPQAQQQITSGQMHRGHMPPLTSAQQALTGTINSSMQAVHAAQATLDDFETLPPLGQDAASKAWRKNKMDESKHEIHSQVDAITAGTASVVNLTAGDPADTDYTAVGCAVTTISSNLTEMSKGVKLLAALMEDEGGNGRQLLQAAKNLASAVSDLLKTAQPASVEPRQNLLQAAGSVGQTSGELLQQIGESDTDPRFQDMLMQLAKAVASAAAALVLKAKNVAQKTEDSALQTQVIAAATQCALSTSQLVACTKVVAPTISSPVCQEQLIEAGKLVAKSAEGCVEASQAATNDDQLLKQVGVAATAVTQALNDLLQHIKQHATGGQPIGRYDQATDTILNVTENIFSSMGDAGEMVRQARILAQATSDLVNAIKADAEGETDLENSRKLLSAAKMLADATAKMVEAAKGAAAHPDSEEQQQRLREAAEGLRIATNAAAQNAIKKKLVHKLEHTAKQAAASATQTIAAAQHAAASNKNPAAQQQLVQSCKVVADQIPMLVQGVRGSQSQPDSPSAQLALIAASQNFLQPGGKMVAAAKATVPTIADQASAMQLSQCAKNLAAALAELRTAAQKAQETCGPLEIDTALSMVQSLERDLQEAKAAARDGKLKPLPGETMEKCAQDLGNSTKAVSSAIAQLLGEVAQGNENYTGIAARDVAQALRSLSQAARGVAANTSDPQVQSAMLECAGDVMDKAGNLIEEARKGVGKPGDPESQQRLAQVAKAVSQALNRCVNCLPGQRDVDAAIRTVSEASKKLLAESLPPSTKSFQEAQSQLNQAAAGLNQSANELVQASRGTPQDLARSSGKFGQDFNEFLEAGVEMAGQSPNKEDQAQVVSNLKSISMSSSKLLLAAKALSADPAAPNLKNQLAAAARAVTDSINQLITMCTQQAPGQKECDNALRELETVRELLENPTQAVNDMSYFNCLDSVMENSKVLGEAMAGISQHAKNSKLLEFGESVSTASKALCGFTEAAAQAAYLVAVSDPNSQAGQQGLVDPTQFARANQAIQMACQNLVDPACTQSQVLSAATIVAKHTSALCNTCRLASSRTANPVAKRQFVQSAKEVANSTANLVKTIKALDGAFNEDNRERCRAATAPLIEAVDNLTAFASNPEFATIPAQISPEGRRAMEPIVTSAKTMLESSAGLIQTARSLAVNPKDPPKWSVLAGHSRTVSDSIKKLITNMRDKAPGQRECDEAIEVLNKCMRDVDQASLAAISQQLAPREGISQEALHNQMITAVQEISNLIEPVASAARAEASQLGHKVSQMAQYFEPLILAAVGAASKTLNHQQQMNLLDQTKTLSESALQMLYTAKEAGGNPKQAAHTQEALEEAVQMMKEAVEDLTTTLNEAASAAGVVGGMVDSITQAINQLDEGPMGEPEGTFVDYQTTMVKTAKAIAVTVQEMVTKSTTNPDELGTLANQLTSDYGQLAHQAKPAAITAENDEIGSHIKNRVQELGHGCAALVTKAGALQCSPSDAYTKKELIECARKVSEKVSHVLAALQAGNRGTQACITAASAVSGIIADLDTTIMFATA…
SIO_010081: TLN1
subclass of: SO_0000673
so part of: TLN1
location: complement(join(741076..741207,742356..742484,743734..743916,744376..744438,750331..750456,750866..750990,754163..754268,755715..755717,758477..758584,759002..759187,759761..759877,761100..761225,761390..761573,763586..763752,764332..764478,764823..764942,765166..765267,766782..766931,767837..768007,768178..768279,769176..769308,770106..770287,770761..770901,771073..771234,772142..772285,772602..772724,773814..773903,774272..774365,776886..777025,777890..778087,778684..778803,779235..779443,779915..780017,780245..780373,780487..780621,780887..781000,783647..783760,785151..785279,786558..786724,787211..787505,788056..788223,789897..789995,790104..790312,790810..790918,791494..791607,792607..792787,798434..798510,799291..799392,799833..799988,800257..800361,800880..800940,801363..801490,806734..806876,807155..807307,807664..807793,808232..808329,826901..827030))
location: region:741076-827030:-1
so has part: feature:826901-827030:-1:exon
so has part: feature:808232-808329:-1:exon
so has part: feature:807664-807793:-1:exon
so has part: feature:807155-807307:-1:exon
so has part: feature:806734-806876:-1:exon
so has part: feature:801363-801490:-1:exon
so has part: feature:800880-800940:-1:exon
so has part: feature:800257-800361:-1:exon
so has part: feature:799833-799988:-1:exon
so has part: feature:799291-799392:-1:exon
so has part: feature:798434-798510:-1:exon
so has part: feature:792607-792787:-1:exon
so has part: feature:791494-791607:-1:exon
so has part: feature:790810-790918:-1:exon
so has part: feature:790104-790312:-1:exon
so has part: feature:789897-789995:-1:exon
so has part: feature:788056-788223:-1:exon
so has part: feature:787211-787505:-1:exon
so has part: feature:786558-786724:-1:exon
so has part: feature:785151-785279:-1:exon
so has part: feature:783647-783760:-1:exon
so has part: feature:780887-781000:-1:exon
so has part: feature:780487-780621:-1:exon
so has part: feature:780245-780373:-1:exon
so has part: feature:779915-780017:-1:exon
so has part: feature:779235-779443:-1:exon
so has part: feature:778684-778803:-1:exon
so has part: feature:777890-778087:-1:exon
so has part: feature:776886-777025:-1:exon
so has part: feature:774272-774365:-1:exon
so has part: feature:773814-773903:-1:exon
so has part: feature:772602-772724:-1:exon
so has part: feature:772142-772285:-1:exon
so has part: feature:771073-771234:-1:exon
so has part: feature:770761-770901:-1:exon
so has part: feature:770106-770287:-1:exon
so has part: feature:769176-769308:-1:exon
so has part: feature:768178-768279:-1:exon
so has part: feature:767837-768007:-1:exon
so has part: feature:766782-766931:-1:exon
so has part: feature:765166-765267:-1:exon
so has part: feature:764823-764942:-1:exon
so has part: feature:764332-764478:-1:exon
so has part: feature:763586-763752:-1:exon
so has part: feature:761390-761573:-1:exon
so has part: feature:761100-761225:-1:exon
so has part: feature:759761-759877:-1:exon
so has part: feature:759002-759187:-1:exon
so has part: feature:758477-758584:-1:exon
so has part: feature:755715-755717:-1:exon
so has part: feature:754163-754268:-1:exon
so has part: feature:750866-750990:-1:exon
so has part: feature:750331-750456:-1:exon
so has part: feature:744376-744438:-1:exon
so has part: feature:743734-743916:-1:exon
so has part: feature:742356-742484:-1:exon
so has part: feature:741076-741207:-1:exon

XP_034644010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:826901-827030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808232-808329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807664-807793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:807155-807307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806734-806876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:801363-801490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800880-800940:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800257-800361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:799833-799988:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:799291-799392:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:798434-798510:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:792607-792787:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:791494-791607:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790810-790918:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:790104-790312:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:789897-789995:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:788056-788223:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:787211-787505:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:786558-786724:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:785151-785279:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:783647-783760:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:780887-781000:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:780487-780621:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:780245-780373:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:779915-780017:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:779235-779443:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:778684-778803:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:777890-778087:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:776886-777025:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:774272-774365:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:773814-773903:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:772602-772724:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:772142-772285:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:771073-771234:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:770761-770901:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:770106-770287:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:769176-769308:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:768178-768279:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:767837-768007:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:766782-766931:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:765166-765267:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:764823-764942:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:764332-764478:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:763586-763752:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:761390-761573:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:761100-761225:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:759761-759877:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:759002-759187:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:758477-758584:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:755715-755717:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:754163-754268:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:750866-750990:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:750331-750456:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:744376-744438:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:743734-743916:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:742356-742484:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:741076-741207:-1:exon

TLN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TLN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin-1 isoform X2
translation: MVALSLKISIGNVVKTMQFEPSTMVYDACRIIRERVPEAQMGQPSDFGLFLSDEDPKKGIWLEAGKALDYYMLRNGDTMEYKKKQRPLKIRMLDGTVKTVMVDDSKTVTDILMTICARIGITNHDEYSLVREMMEEKKEEITGTLKKDKTLLRDEKKMEKLKQKLHTDDELNWLDHGRTLREQGIDDSETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKPGFLDLKDFLPKEYIKQKGERKIFMAHKNCSNMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWNLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTMLEDSVSPKKSTVLQQQFNRVGKVEHGSVALPAIMRSGAGGPENFQVGTMPQAQQQITSGQMHRGHMPPLTSAQQALTGTINSSMQAVHAAQATLDDFETLPPLGQDAASKAWRKNKMDESKHEIHSQVDAITAGTASVVNLTAGDPADTDYTAVGCAVTTISSNLTEMSKGVKLLAALMEDEGGNGRQLLQAAKNLASAVSDLLKTAQPASVEPRQNLLQAAGSVGQTSGELLQQIGESDTDPRFQIPESRHARTLPTSEPKTDMLMQLAKAVASAAAALVLKAKNVAQKTEDSALQTQVIAAATQCALSTSQLVACTKVVAPTISSPVCQEQLIEAGKLVAKSAEGCVEASQAATNDDQLLKQVGVAATAVTQALNDLLQHIKQHATGGQPIGRYDQATDTILNVTENIFSSMGDAGEMVRQARILAQATSDLVNAIKADAEGETDLENSRKLLSAAKMLADATAKMVEAAKGAAAHPDSEEQQQRLREAAEGLRIATNAAAQNAIKKKLVHKLEHTAKQAAASATQTIAAAQHAAASNKNPAAQQQLVQSCKVVADQIPMLVQGVRGSQSQPDSPSAQLALIAASQNFLQPGGKMVAAAKATVPTIADQASAMQLSQCAKNLAAALAELRTAAQKAQETCGPLEIDTALSMVQSLERDLQEAKAAARDGKLKPLPGETMEKCAQDLGNSTKAVSSAIAQLLGEVAQGNENYTGIAARDVAQALRSLSQAARGVAANTSDPQVQSAMLECAGDVMDKAGNLIEEARKGVGKPGDPESQQRLAQVAKAVSQALNRCVNCLPGQRDVDAAIRTVSEASKKLLAESLPPSTKSFQEAQSQLNQAAAGLNQSANELVQASRGTPQDLARSSGKFGQDFNEFLEAGVEMAGQSPNKEDQAQVVSNLKSISMSSSKLLLAAKALSADPAAPNLKNQLAAAARAVTDSINQLITMCTQQAPGQKECDNALRELETVRELLENPTQAVNDMSYFNCLDSVMENSKVLGEAMAGISQHAKNSKLLEFGESVSTASKALCGFTEAAAQAAYLVAVSDPNSQAGQQGLVDPTQFARANQAIQMACQNLVDPACTQSQVLSAATIVAKHTSALCNTCRLASSRTANPVAKRQFVQSAKEVANSTANLVKTIKALDGAFNEDNRERCRAATAPLIEAVDNLTAFASNPEFATIPAQISPEGRRAMEPIVTSAKTMLESSAGLIQTARSLAVNPKDPPKWSVLAGHSRTVSDSIKKLITNMRDKAPGQRECDEAIEVLNKCMRDVDQASLAAISQQLAPREGISQEALHNQMITAVQEISNLIEPVASAARAEASQLGHKVSQMAQYFEPLILAAVGAASKTLNHQQQMNLLDQTKTLSESALQMLYTAKEAGGNPKQAAHTQEALEEAVQMMKEAVEDLTTTLNEAASAAGVVGGMVDSITQAINQLDEGPMGEPEGTFVDYQTTMVKTAKAIAVTVQEMVTKSTTNPDELGTLANQLTSDYGQLAHQAKPAAITAENDEIGSHIKNRVQELGHGCAALVTKAGALQCSPSDAYTKKELIECARKVSEKVSHVLAALQAGNRGTQACITAASA…
SIO_010081: TLN1
subclass of: SO_0000673
so part of: TLN1
location: complement(join(741076..741207,742356..742484,743734..743916,744376..744438,750331..750456,750866..750990,754163..754268,758477..758584,759002..759187,759761..759877,761100..761225,761390..761573,763586..763752,764332..764478,764823..764942,765166..765267,766782..766931,767837..768007,768178..768279,769176..769308,770106..770287,770761..770901,771073..771234,772142..772285,772602..772724,773814..773903,774272..774365,776886..777025,777890..778087,778684..778803,779235..779443,779915..780017,780245..780373,780487..780621,780887..781000,783647..783760,785151..785279,786558..786724,787211..787505,788056..788223,789604..789654,789897..789995,790104..790312,790810..790918,791494..791607,792607..792787,798434..798510,799291..799392,799833..799988,800257..800361,800880..800940,801363..801490,806734..806876,807155..807307,807664..807793,808232..808329,826901..827030))
location: region:741076-827030:-1
so has part: feature:826901-827030:-1:exon
so has part: feature:808232-808329:-1:exon
so has part: feature:807664-807793:-1:exon
so has part: feature:807155-807307:-1:exon
so has part: feature:806734-806876:-1:exon
so has part: feature:801363-801490:-1:exon
so has part: feature:800880-800940:-1:exon
so has part: feature:800257-800361:-1:exon
so has part: feature:799833-799988:-1:exon
so has part: feature:799291-799392:-1:exon
so has part: feature:798434-798510:-1:exon
so has part: feature:792607-792787:-1:exon
so has part: feature:791494-791607:-1:exon
so has part: feature:790810-790918:-1:exon
so has part: feature:790104-790312:-1:exon
so has part: feature:789897-789995:-1:exon
so has part: feature:789604-789654:-1:exon
so has part: feature:788056-788223:-1:exon
so has part: feature:787211-787505:-1:exon
so has part: feature:786558-786724:-1:exon
so has part: feature:785151-785279:-1:exon
so has part: feature:783647-783760:-1:exon
so has part: feature:780887-781000:-1:exon
so has part: feature:780487-780621:-1:exon
so has part: feature:780245-780373:-1:exon
so has part: feature:779915-780017:-1:exon
so has part: feature:779235-779443:-1:exon
so has part: feature:778684-778803:-1:exon
so has part: feature:777890-778087:-1:exon
so has part: feature:776886-777025:-1:exon
so has part: feature:774272-774365:-1:exon
so has part: feature:773814-773903:-1:exon
so has part: feature:772602-772724:-1:exon
so has part: feature:772142-772285:-1:exon
so has part: feature:771073-771234:-1:exon
so has part: feature:770761-770901:-1:exon
so has part: feature:770106-770287:-1:exon
so has part: feature:769176-769308:-1:exon
so has part: feature:768178-768279:-1:exon
so has part: feature:767837-768007:-1:exon
so has part: feature:766782-766931:-1:exon
so has part: feature:765166-765267:-1:exon
so has part: feature:764823-764942:-1:exon
so has part: feature:764332-764478:-1:exon
so has part: feature:763586-763752:-1:exon
so has part: feature:761390-761573:-1:exon
so has part: feature:761100-761225:-1:exon
so has part: feature:759761-759877:-1:exon
so has part: feature:759002-759187:-1:exon
so has part: feature:758477-758584:-1:exon
so has part: feature:754163-754268:-1:exon
so has part: feature:750866-750990:-1:exon
so has part: feature:750331-750456:-1:exon
so has part: feature:744376-744438:-1:exon
so has part: feature:743734-743916:-1:exon
so has part: feature:742356-742484:-1:exon
so has part: feature:741076-741207:-1:exon

XP_034644009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:826901-827030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808232-808329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807664-807793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:807155-807307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806734-806876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:801363-801490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800880-800940:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800257-800361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:799833-799988:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:799291-799392:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:798434-798510:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:792607-792787:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:791494-791607:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790810-790918:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:790104-790312:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:789897-789995:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:789604-789654:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:788056-788223:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:787211-787505:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:786558-786724:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:785151-785279:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:783647-783760:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:780887-781000:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:780487-780621:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:780245-780373:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:779915-780017:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:779235-779443:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:778684-778803:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:777890-778087:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:776886-777025:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:774272-774365:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:773814-773903:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:772602-772724:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:772142-772285:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:771073-771234:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:770761-770901:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:770106-770287:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:769176-769308:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:768178-768279:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:767837-768007:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:766782-766931:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:765166-765267:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:764823-764942:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:764332-764478:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:763586-763752:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:761390-761573:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:761100-761225:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:759761-759877:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:759002-759187:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:758477-758584:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:754163-754268:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:750866-750990:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:750331-750456:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:744376-744438:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:743734-743916:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:742356-742484:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:741076-741207:-1:exon

TLN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TLN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin-1 isoform X1
translation: MVALSLKISIGNVVKTMQFEPSTMVYDACRIIRERVPEAQMGQPSDFGLFLSDEDPKKGIWLEAGKALDYYMLRNGDTMEYKKKQRPLKIRMLDGTVKTVMVDDSKTVTDILMTICARIGITNHDEYSLVREMMEEKKEEITGTLKKDKTLLRDEKKMEKLKQKLHTDDELNWLDHGRTLREQGIDDSETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKPGFLDLKDFLPKEYIKQKGERKIFMAHKNCSNMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWNLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTMLEDSVSPKKSTVLQQQFNRVGKVEHGSVALPAIMRSGAGGPENFQVGTMPQAQQQITSGQMHRGHMPPLTSAQQALTGTINSSMQAVHAAQATLDDFETLPPLGQDAASKAWRKNKMDESKHEIHSQVDAITAGTASVVNLTAGDPADTDYTAVGCAVTTISSNLTEMSKGVKLLAALMEDEGGNGRQLLQAAKNLASAVSDLLKTAQPASVEPRQNLLQAAGSVGQTSGELLQQIGESDTDPRFQIPESRHARTLPTSEPKTDMLMQLAKAVASAAAALVLKAKNVAQKTEDSALQTQVIAAATQCALSTSQLVACTKVVAPTISSPVCQEQLIEAGKLVAKSAEGCVEASQAATNDDQLLKQVGVAATAVTQALNDLLQHIKQHATGGQPIGRYDQATDTILNVTENIFSSMGDAGEMVRQARILAQATSDLVNAIKADAEGETDLENSRKLLSAAKMLADATAKMVEAAKGAAAHPDSEEQQQRLREAAEGLRIATNAAAQNAIKKKLVHKLEHTAKQAAASATQTIAAAQHAAASNKNPAAQQQLVQSCKVVADQIPMLVQGVRGSQSQPDSPSAQLALIAASQNFLQPGGKMVAAAKATVPTIADQASAMQLSQCAKNLAAALAELRTAAQKAQETCGPLEIDTALSMVQSLERDLQEAKAAARDGKLKPLPGETMEKCAQDLGNSTKAVSSAIAQLLGEVAQGNENYTGIAARDVAQALRSLSQAARGVAANTSDPQVQSAMLECAGDVMDKAGNLIEEARKGVGKPGDPESQQRLAQVAKAVSQALNRCVNCLPGQRDVDAAIRTVSEASKKLLAESLPPSTKSFQEAQSQLNQAAAGLNQSANELVQASRGTPQDLARSSGKFGQDFNEFLEAGVEMAGQSPNKEDQAQVVSNLKSISMSSSKLLLAAKALSADPAAPNLKNQLAAAARAVTDSINQLITMCTQQAPGQKECDNALRELETVRELLENPTQAVNDMSYFNCLDSVMENSKVLGEAMAGISQHAKNSKLLEFGESVSTASKALCGFTEAAAQAAYLVAVSDPNSQAGQQGLVDPTQFARANQAIQMACQNLVDPACTQSQVLSAATIVAKHTSALCNTCRLASSRTANPVAKRQFVQSAKEVANSTANLVKTIKALDGAFNEDNRERCRAATAPLIEAVDNLTAFASNPEFATIPAQISPEGRRAMEPIVTSAKTMLESSAGLIQTARSLAVNPKDPPKWSVLAGHSRTVSDSIKKLITNMRDKAPGQRECDEAIEVLNKCMRDVDQASLAAISQQLAPREGISQEALHNQMITAVQEISNLIEPVASAARAEASQLGHKVSQMAQYFEPLILAAVGAASKTLNHQQQMNLLDQTKTLSESALQMLYTAKEAGGNPKQAAHTQEALEEAVQMMKEAVEDLTTTLNEAASAAGVVGGMVDSITQAINQLDEGPMGEPEGTFVDYQTTMVKTAKAIAVTVQEMVTKSTTNPDELGTLANQLTSDYGQLAHQAKPAAITAENDEIGSHIKNRVQELGHGCAALVTKAGALQCSPSDAYTKKELIECARKVSEKVSHVLAALQAGNRGTQACITAASA…
SIO_010081: TLN1
subclass of: SO_0000673
so part of: TLN1
location: complement(join(741076..741207,742356..742484,743734..743916,744376..744438,750331..750456,750866..750990,754163..754268,755715..755717,758477..758584,759002..759187,759761..759877,761100..761225,761390..761573,763586..763752,764332..764478,764823..764942,765166..765267,766782..766931,767837..768007,768178..768279,769176..769308,770106..770287,770761..770901,771073..771234,772142..772285,772602..772724,773814..773903,774272..774365,776886..777025,777890..778087,778684..778803,779235..779443,779915..780017,780245..780373,780487..780621,780887..781000,783647..783760,785151..785279,786558..786724,787211..787505,788056..788223,789604..789654,789897..789995,790104..790312,790810..790918,791494..791607,792607..792787,798434..798510,799291..799392,799833..799988,800257..800361,800880..800940,801363..801490,806734..806876,807155..807307,807664..807793,808232..808329,826901..827030))
location: region:741076-827030:-1
so has part: feature:826901-827030:-1:exon
so has part: feature:808232-808329:-1:exon
so has part: feature:807664-807793:-1:exon
so has part: feature:807155-807307:-1:exon
so has part: feature:806734-806876:-1:exon
so has part: feature:801363-801490:-1:exon
so has part: feature:800880-800940:-1:exon
so has part: feature:800257-800361:-1:exon
so has part: feature:799833-799988:-1:exon
so has part: feature:799291-799392:-1:exon
so has part: feature:798434-798510:-1:exon
so has part: feature:792607-792787:-1:exon
so has part: feature:791494-791607:-1:exon
so has part: feature:790810-790918:-1:exon
so has part: feature:790104-790312:-1:exon
so has part: feature:789897-789995:-1:exon
so has part: feature:789604-789654:-1:exon
so has part: feature:788056-788223:-1:exon
so has part: feature:787211-787505:-1:exon
so has part: feature:786558-786724:-1:exon
so has part: feature:785151-785279:-1:exon
so has part: feature:783647-783760:-1:exon
so has part: feature:780887-781000:-1:exon
so has part: feature:780487-780621:-1:exon
so has part: feature:780245-780373:-1:exon
so has part: feature:779915-780017:-1:exon
so has part: feature:779235-779443:-1:exon
so has part: feature:778684-778803:-1:exon
so has part: feature:777890-778087:-1:exon
so has part: feature:776886-777025:-1:exon
so has part: feature:774272-774365:-1:exon
so has part: feature:773814-773903:-1:exon
so has part: feature:772602-772724:-1:exon
so has part: feature:772142-772285:-1:exon
so has part: feature:771073-771234:-1:exon
so has part: feature:770761-770901:-1:exon
so has part: feature:770106-770287:-1:exon
so has part: feature:769176-769308:-1:exon
so has part: feature:768178-768279:-1:exon
so has part: feature:767837-768007:-1:exon
so has part: feature:766782-766931:-1:exon
so has part: feature:765166-765267:-1:exon
so has part: feature:764823-764942:-1:exon
so has part: feature:764332-764478:-1:exon
so has part: feature:763586-763752:-1:exon
so has part: feature:761390-761573:-1:exon
so has part: feature:761100-761225:-1:exon
so has part: feature:759761-759877:-1:exon
so has part: feature:759002-759187:-1:exon
so has part: feature:758477-758584:-1:exon
so has part: feature:755715-755717:-1:exon
so has part: feature:754163-754268:-1:exon
so has part: feature:750866-750990:-1:exon
so has part: feature:750331-750456:-1:exon
so has part: feature:744376-744438:-1:exon
so has part: feature:743734-743916:-1:exon
so has part: feature:742356-742484:-1:exon
so has part: feature:741076-741207:-1:exon

XP_034644007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:826901-827030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808232-808329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807664-807793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:807155-807307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806734-806876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:801363-801490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800880-800940:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800257-800361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:799833-799988:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:799291-799392:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:798434-798510:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:792607-792787:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:791494-791607:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790810-790918:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:790104-790312:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:789897-789995:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:789604-789654:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:788056-788223:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:787211-787505:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:786558-786724:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:785151-785279:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:783647-783760:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:780887-781000:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:780487-780621:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:780245-780373:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:779915-780017:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:779235-779443:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:778684-778803:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:777890-778087:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:776886-777025:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:774272-774365:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:773814-773903:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:772602-772724:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:772142-772285:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:771073-771234:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:770761-770901:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:770106-770287:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:769176-769308:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:768178-768279:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:767837-768007:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:766782-766931:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:765166-765267:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:764823-764942:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:764332-764478:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:763586-763752:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:761390-761573:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:761100-761225:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:759761-759877:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:759002-759187:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:758477-758584:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:755715-755717:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:754163-754268:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:750866-750990:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:750331-750456:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:744376-744438:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:743734-743916:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:742356-742484:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:741076-741207:-1:exon

TLN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TLN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin-1 isoform X1
translation: MVALSLKISIGNVVKTMQFEPSTMVYDACRIIRERVPEAQMGQPSDFGLFLSDEDPKKGIWLEAGKALDYYMLRNGDTMEYKKKQRPLKIRMLDGTVKTVMVDDSKTVTDILMTICARIGITNHDEYSLVREMMEEKKEEITGTLKKDKTLLRDEKKMEKLKQKLHTDDELNWLDHGRTLREQGIDDSETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKPGFLDLKDFLPKEYIKQKGERKIFMAHKNCSNMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWNLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTMLEDSVSPKKSTVLQQQFNRVGKVEHGSVALPAIMRSGAGGPENFQVGTMPQAQQQITSGQMHRGHMPPLTSAQQALTGTINSSMQAVHAAQATLDDFETLPPLGQDAASKAWRKNKMDESKHEIHSQVDAITAGTASVVNLTAGDPADTDYTAVGCAVTTISSNLTEMSKGVKLLAALMEDEGGNGRQLLQAAKNLASAVSDLLKTAQPASVEPRQNLLQAAGSVGQTSGELLQQIGESDTDPRFQIPESRHARTLPTSEPKTDMLMQLAKAVASAAAALVLKAKNVAQKTEDSALQTQVIAAATQCALSTSQLVACTKVVAPTISSPVCQEQLIEAGKLVAKSAEGCVEASQAATNDDQLLKQVGVAATAVTQALNDLLQHIKQHATGGQPIGRYDQATDTILNVTENIFSSMGDAGEMVRQARILAQATSDLVNAIKADAEGETDLENSRKLLSAAKMLADATAKMVEAAKGAAAHPDSEEQQQRLREAAEGLRIATNAAAQNAIKKKLVHKLEHTAKQAAASATQTIAAAQHAAASNKNPAAQQQLVQSCKVVADQIPMLVQGVRGSQSQPDSPSAQLALIAASQNFLQPGGKMVAAAKATVPTIADQASAMQLSQCAKNLAAALAELRTAAQKAQETCGPLEIDTALSMVQSLERDLQEAKAAARDGKLKPLPGETMEKCAQDLGNSTKAVSSAIAQLLGEVAQGNENYTGIAARDVAQALRSLSQAARGVAANTSDPQVQSAMLECAGDVMDKAGNLIEEARKGVGKPGDPESQQRLAQVAKAVSQALNRCVNCLPGQRDVDAAIRTVSEASKKLLAESLPPSTKSFQEAQSQLNQAAAGLNQSANELVQASRGTPQDLARSSGKFGQDFNEFLEAGVEMAGQSPNKEDQAQVVSNLKSISMSSSKLLLAAKALSADPAAPNLKNQLAAAARAVTDSINQLITMCTQQAPGQKECDNALRELETVRELLENPTQAVNDMSYFNCLDSVMENSKVLGEAMAGISQHAKNSKLLEFGESVSTASKALCGFTEAAAQAAYLVAVSDPNSQAGQQGLVDPTQFARANQAIQMACQNLVDPACTQSQVLSAATIVAKHTSALCNTCRLASSRTANPVAKRQFVQSAKEVANSTANLVKTIKALDGAFNEDNRERCRAATAPLIEAVDNLTAFASNPEFATIPAQISPEGRRAMEPIVTSAKTMLESSAGLIQTARSLAVNPKDPPKWSVLAGHSRTVSDSIKKLITNMRDKAPGQRECDEAIEVLNKCMRDVDQASLAAISQQLAPREGISQEALHNQMITAVQEISNLIEPVASAARAEASQLGHKVSQMAQYFEPLILAAVGAASKTLNHQQQMNLLDQTKTLSESALQMLYTAKEAGGNPKQAAHTQEALEEAVQMMKEAVEDLTTTLNEAASAAGVVGGMVDSITQAINQLDEGPMGEPEGTFVDYQTTMVKTAKAIAVTVQEMVTKSTTNPDELGTLANQLTSDYGQLAHQAKPAAITAENDEIGSHIKNRVQELGHGCAALVTKAGALQCSPSDAYTKKELIECARKVSEKVSHVLAALQAGNRGTQACITAASA…
SIO_010081: TLN1
subclass of: SO_0000673
so part of: TLN1
location: complement(join(741076..741207,742356..742484,743734..743916,744376..744438,750331..750456,750866..750990,754163..754268,755715..755717,758477..758584,759002..759187,759761..759877,761100..761225,761390..761573,763586..763752,764332..764478,764823..764942,765166..765267,766782..766931,767837..768007,768178..768279,769176..769308,770106..770287,770761..770901,771073..771234,772142..772285,772602..772724,773814..773903,774272..774365,776886..777025,777890..778087,778684..778803,779235..779443,779915..780017,780245..780373,780487..780621,780887..781000,783647..783760,785151..785279,786558..786724,787211..787505,788056..788223,789604..789654,789897..789995,790104..790312,790810..790918,791494..791607,792607..792787,798434..798510,799291..799392,799833..799988,800257..800361,800880..800940,801363..801490,806734..806876,807155..807307,807664..807793,808232..808329,826901..827030))
location: region:741076-827030:-1
so has part: feature:826901-827030:-1:exon
so has part: feature:808232-808329:-1:exon
so has part: feature:807664-807793:-1:exon
so has part: feature:807155-807307:-1:exon
so has part: feature:806734-806876:-1:exon
so has part: feature:801363-801490:-1:exon
so has part: feature:800880-800940:-1:exon
so has part: feature:800257-800361:-1:exon
so has part: feature:799833-799988:-1:exon
so has part: feature:799291-799392:-1:exon
so has part: feature:798434-798510:-1:exon
so has part: feature:792607-792787:-1:exon
so has part: feature:791494-791607:-1:exon
so has part: feature:790810-790918:-1:exon
so has part: feature:790104-790312:-1:exon
so has part: feature:789897-789995:-1:exon
so has part: feature:789604-789654:-1:exon
so has part: feature:788056-788223:-1:exon
so has part: feature:787211-787505:-1:exon
so has part: feature:786558-786724:-1:exon
so has part: feature:785151-785279:-1:exon
so has part: feature:783647-783760:-1:exon
so has part: feature:780887-781000:-1:exon
so has part: feature:780487-780621:-1:exon
so has part: feature:780245-780373:-1:exon
so has part: feature:779915-780017:-1:exon
so has part: feature:779235-779443:-1:exon
so has part: feature:778684-778803:-1:exon
so has part: feature:777890-778087:-1:exon
so has part: feature:776886-777025:-1:exon
so has part: feature:774272-774365:-1:exon
so has part: feature:773814-773903:-1:exon
so has part: feature:772602-772724:-1:exon
so has part: feature:772142-772285:-1:exon
so has part: feature:771073-771234:-1:exon
so has part: feature:770761-770901:-1:exon
so has part: feature:770106-770287:-1:exon
so has part: feature:769176-769308:-1:exon
so has part: feature:768178-768279:-1:exon
so has part: feature:767837-768007:-1:exon
so has part: feature:766782-766931:-1:exon
so has part: feature:765166-765267:-1:exon
so has part: feature:764823-764942:-1:exon
so has part: feature:764332-764478:-1:exon
so has part: feature:763586-763752:-1:exon
so has part: feature:761390-761573:-1:exon
so has part: feature:761100-761225:-1:exon
so has part: feature:759761-759877:-1:exon
so has part: feature:759002-759187:-1:exon
so has part: feature:758477-758584:-1:exon
so has part: feature:755715-755717:-1:exon
so has part: feature:754163-754268:-1:exon
so has part: feature:750866-750990:-1:exon
so has part: feature:750331-750456:-1:exon
so has part: feature:744376-744438:-1:exon
so has part: feature:743734-743916:-1:exon
so has part: feature:742356-742484:-1:exon
so has part: feature:741076-741207:-1:exon

XP_034644008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:826901-827030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808232-808329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807664-807793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:807155-807307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806734-806876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:801363-801490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800880-800940:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800257-800361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:799833-799988:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:799291-799392:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:798434-798510:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:792607-792787:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:791494-791607:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790810-790918:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:790104-790312:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:789897-789995:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:789604-789654:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:788056-788223:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:787211-787505:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:786558-786724:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:785151-785279:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:783647-783760:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:780887-781000:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:780487-780621:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:780245-780373:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:779915-780017:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:779235-779443:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:778684-778803:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:777890-778087:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:776886-777025:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:774272-774365:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:773814-773903:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:772602-772724:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:772142-772285:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:771073-771234:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:770761-770901:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:770106-770287:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:769176-769308:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:768178-768279:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:767837-768007:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:766782-766931:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:765166-765267:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:764823-764942:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:764332-764478:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:763586-763752:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:761390-761573:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:761100-761225:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:759761-759877:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:759002-759187:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:758477-758584:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:755715-755717:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:754163-754268:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:750866-750990:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:750331-750456:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:744376-744438:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:743734-743916:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:742356-742484:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:741076-741207:-1:exon

TLN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TLN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin-1 isoform X5
translation: MLRNGDTMEYKKKQRPLKIRMLDGTVKTVMVDDSKTVTDILMTICARIGITNHDEYSLVREMMEEKKEEITGTLKKDKTLLRDEKKMEKLKQKLHTDDELNWLDHGRTLREQGIDDSETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKPGFLDLKDFLPKEYIKQKGERKIFMAHKNCSNMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWNLTNIKRWAASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTMLEDSVSPKKSTVLQQQFNRVGKVEHGSVALPAIMRSGAGGPENFQVGTMPQAQQQITSGQMHRGHMPPLTSAQQALTGTINSSMQAVHAAQATLDDFETLPPLGQDAASKAWRKNKMDESKHEIHSQVDAITAGTASVVNLTAGDPADTDYTAVGCAVTTISSNLTEMSKGVKLLAALMEDEGGNGRQLLQAAKNLASAVSDLLKTAQPASVEPRQNLLQAAGSVGQTSGELLQQIGESDTDPRFQIPESRHARTLPTSEPKTDMLMQLAKAVASAAAALVLKAKNVAQKTEDSALQTQVIAAATQCALSTSQLVACTKVVAPTISSPVCQEQLIEAGKLVAKSAEGCVEASQAATNDDQLLKQVGVAATAVTQALNDLLQHIKQHATGGQPIGRYDQATDTILNVTENIFSSMGDAGEMVRQARILAQATSDLVNAIKADAEGETDLENSRKLLSAAKMLADATAKMVEAAKGAAAHPDSEEQQQRLREAAEGLRIATNAAAQNAIKKKLVHKLEHTAKQAAASATQTIAAAQHAAASNKNPAAQQQLVQSCKVVADQIPMLVQGVRGSQSQPDSPSAQLALIAASQNFLQPGGKMVAAAKATVPTIADQASAMQLSQCAKNLAAALAELRTAAQKAQETCGPLEIDTALSMVQSLERDLQEAKAAARDGKLKPLPGETMEKCAQDLGNSTKAVSSAIAQLLGEVAQGNENYTGIAARDVAQALRSLSQAARGVAANTSDPQVQSAMLECAGDVMDKAGNLIEEARKGVGKPGDPESQQRLAQVAKAVSQALNRCVNCLPGQRDVDAAIRTVSEASKKLLAESLPPSTKSFQEAQSQLNQAAAGLNQSANELVQASRGTPQDLARSSGKFGQDFNEFLEAGVEMAGQSPNKEDQAQVVSNLKSISMSSSKLLLAAKALSADPAAPNLKNQLAAAARAVTDSINQLITMCTQQAPGQKECDNALRELETVRELLENPTQAVNDMSYFNCLDSVMENSKVLGEAMAGISQHAKNSKLLEFGESVSTASKALCGFTEAAAQAAYLVAVSDPNSQAGQQGLVDPTQFARANQAIQMACQNLVDPACTQSQVLSAATIVAKHTSALCNTCRLASSRTANPVAKRQFVQSAKEVANSTANLVKTIKALDGAFNEDNRERCRAATAPLIEAVDNLTAFASNPEFATIPAQISPEGRRAMEPIVTSAKTMLESSAGLIQTARSLAVNPKDPPKWSVLAGHSRTVSDSIKKLITNMRDKAPGQRECDEAIEVLNKCMRDVDQASLAAISQQLAPREGISQEALHNQMITAVQEISNLIEPVASAARAEASQLGHKVSQMAQYFEPLILAAVGAASKTLNHQQQMNLLDQTKTLSESALQMLYTAKEAGGNPKQAAHTQEALEEAVQMMKEAVEDLTTTLNEAASAAGVVGGMVDSITQAINQLDEGPMGEPEGTFVDYQTTMVKTAKAIAVTVQEMVTKSTTNPDELGTLANQLTSDYGQLAHQAKPAAITAENDEIGSHIKNRVQELGHGCAALVTKAGALQCSPSDAYTKKELIECARKVSEKVSHVLAALQAGNRGTQACITAASAVSGIIADLDTTIMFATAGTLNRENAETFADHREGILKTAKALVEDTKVLVQNATASQEKLAQAAQSSVATI…
SIO_010081: TLN1
subclass of: SO_0000673
so part of: TLN1
location: complement(join(741076..741207,742356..742484,743734..743916,744376..744438,750331..750456,750866..750990,754163..754268,755715..755717,758477..758584,759002..759187,759761..759877,761100..761225,761390..761573,763586..763752,764332..764478,764823..764942,765166..765267,766782..766931,767837..768007,768178..768279,769176..769308,770106..770287,770761..770901,771073..771234,772142..772285,772602..772724,773814..773903,774272..774365,776886..777025,777890..778087,778684..778803,779235..779443,779915..780017,780245..780373,780487..780621,780887..781000,783647..783760,785151..785279,786558..786724,787211..787505,788056..788223,789604..789654,789897..789995,790104..790312,790810..790918,791494..791607,792607..792787,798434..798510,799291..799392,799833..799988,800257..800361,800880..800940,801363..801490,806734..806876,807155..807307,807664..807793,808232..808246))
location: region:741076-808246:-1
so has part: feature:808232-808246:-1:exon
so has part: feature:807664-807793:-1:exon
so has part: feature:807155-807307:-1:exon
so has part: feature:806734-806876:-1:exon
so has part: feature:801363-801490:-1:exon
so has part: feature:800880-800940:-1:exon
so has part: feature:800257-800361:-1:exon
so has part: feature:799833-799988:-1:exon
so has part: feature:799291-799392:-1:exon
so has part: feature:798434-798510:-1:exon
so has part: feature:792607-792787:-1:exon
so has part: feature:791494-791607:-1:exon
so has part: feature:790810-790918:-1:exon
so has part: feature:790104-790312:-1:exon
so has part: feature:789897-789995:-1:exon
so has part: feature:789604-789654:-1:exon
so has part: feature:788056-788223:-1:exon
so has part: feature:787211-787505:-1:exon
so has part: feature:786558-786724:-1:exon
so has part: feature:785151-785279:-1:exon
so has part: feature:783647-783760:-1:exon
so has part: feature:780887-781000:-1:exon
so has part: feature:780487-780621:-1:exon
so has part: feature:780245-780373:-1:exon
so has part: feature:779915-780017:-1:exon
so has part: feature:779235-779443:-1:exon
so has part: feature:778684-778803:-1:exon
so has part: feature:777890-778087:-1:exon
so has part: feature:776886-777025:-1:exon
so has part: feature:774272-774365:-1:exon
so has part: feature:773814-773903:-1:exon
so has part: feature:772602-772724:-1:exon
so has part: feature:772142-772285:-1:exon
so has part: feature:771073-771234:-1:exon
so has part: feature:770761-770901:-1:exon
so has part: feature:770106-770287:-1:exon
so has part: feature:769176-769308:-1:exon
so has part: feature:768178-768279:-1:exon
so has part: feature:767837-768007:-1:exon
so has part: feature:766782-766931:-1:exon
so has part: feature:765166-765267:-1:exon
so has part: feature:764823-764942:-1:exon
so has part: feature:764332-764478:-1:exon
so has part: feature:763586-763752:-1:exon
so has part: feature:761390-761573:-1:exon
so has part: feature:761100-761225:-1:exon
so has part: feature:759761-759877:-1:exon
so has part: feature:759002-759187:-1:exon
so has part: feature:758477-758584:-1:exon
so has part: feature:755715-755717:-1:exon
so has part: feature:754163-754268:-1:exon
so has part: feature:750866-750990:-1:exon
so has part: feature:750331-750456:-1:exon
so has part: feature:744376-744438:-1:exon
so has part: feature:743734-743916:-1:exon
so has part: feature:742356-742484:-1:exon
so has part: feature:741076-741207:-1:exon

XP_034644012.1
type: Protein
SIO_000068: ncbiprotein

position:808246:-1
position: 808246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808232-808246:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:807664-807793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807155-807307:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806734-806876:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:801363-801490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:800880-800940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800257-800361:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799833-799988:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:799291-799392:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:798434-798510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:792607-792787:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:791494-791607:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:790810-790918:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790104-790312:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:789897-789995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:789604-789654:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:788056-788223:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:787211-787505:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:786558-786724:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:785151-785279:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:783647-783760:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:780887-781000:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:780487-780621:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:780245-780373:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:779915-780017:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:779235-779443:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:778684-778803:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:777890-778087:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:776886-777025:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:774272-774365:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:773814-773903:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:772602-772724:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:772142-772285:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:771073-771234:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:770761-770901:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:770106-770287:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:769176-769308:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:768178-768279:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:767837-768007:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:766782-766931:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:765166-765267:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:764823-764942:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:764332-764478:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:763586-763752:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:761390-761573:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:761100-761225:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:759761-759877:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:759002-759187:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:758477-758584:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:755715-755717:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:754163-754268:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:750866-750990:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:750331-750456:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:744376-744438:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:743734-743916:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:742356-742484:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:741076-741207:-1:exon

HINT2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: HINT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 882216..885986
location: region:882216-885986:1
so has part: feature:882216-885986:1:exon
subclass of: SO_0000010

117886733
type: Gene
SIO_000068: ncbigene

position:882216:1
position: 882216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885986:1
position: 885986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882216-885986:1:exon

HINT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: HINT2
product: histidine triad nucleotide binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034788777.1
SIO_010081: HINT2
subclass of: SO_0000673
so part of: HINT2
location: join(882216..882637,882916..883093,884711..884815,885220..885292,885823..885986)
location: region:882216-885986:1
so has part: feature:882216-882637:1:exon
so has part: feature:882916-883093:1:exon
so has part: feature:884711-884815:1:exon
so has part: feature:885220-885292:1:exon
so has part: feature:885823-885986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:882216-882637:1:exon

position:882637:1
position: 882637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:882916-883093:1:exon

position:882916:1
position: 882916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883093:1
position: 883093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:884711-884815:1:exon

position:884711:1
position: 884711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884815:1
position: 884815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:885220-885292:1:exon

position:885220:1
position: 885220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885292:1
position: 885292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:885823-885986:1:exon

position:885823:1
position: 885823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HINT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: HINT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histidine triad nucleotide-binding protein 2, mitochondrial
translation: MASHPQPAPPGDRGNSDPAKVPLRTRGSRGRAQLRRCRVDAPRSEGRGFSGRAATPCEGQQVAGCRSSFPTGLRLRGDGVPEGRAEPPAMALGCVTLGGCCSPLPQLRHSSACSSAPLRACLGRLASASVARPFALPRPVRADARPPQRCYVAAGGQDGEVQKAQRAAEASEELGQRPPTIFSKIIDRTIRADILYEDDKCLAFRDVAPQAPVHFLVIPKHPIPRLSLVATGDTELLGHLLVVASQTAKVEGLVDGYRVVINDGKQGSQSVYHLHLHVLGGRQMGWPPG
SIO_010081: HINT2
subclass of: SO_0000673
so part of: HINT2
location: join(882216..882637,882916..883093,884711..884815,885220..885292,885823..885914)
location: region:882216-885914:1
so has part: feature:882216-882637:1:exon
so has part: feature:882916-883093:1:exon
so has part: feature:884711-884815:1:exon
so has part: feature:885220-885292:1:exon
so has part: feature:885823-885914:1:exon

XP_034644668.1
type: Protein
SIO_000068: ncbiprotein

position:885914:1
position: 885914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882216-882637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:882916-883093:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:884711-884815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885220-885292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885823-885914:1:exon

SPAG8
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: SPAG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 962685..971357
location: region:962685-971357:1
so has part: feature:962685-971357:1:exon
subclass of: SO_0000010

117886842
type: Gene
SIO_000068: ncbigene

position:962685:1
position: 962685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971357:1
position: 971357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:962685-971357:1:exon

SPAG8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SPAG8
product: sperm associated antigen 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034788920.1
SIO_010081: SPAG8
subclass of: SO_0000673
so part of: SPAG8
location: join(962685..962814,963485..963815,966517..966691,967564..967609,969687..969801,970253..970315,971179..971357)
location: region:962685-971357:1
so has part: feature:962685-962814:1:exon
so has part: feature:963485-963815:1:exon
so has part: feature:966517-966691:1:exon
so has part: feature:967564-967609:1:exon
so has part: feature:969687-969801:1:exon
so has part: feature:970253-970315:1:exon
so has part: feature:971179-971357:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:962685-962814:1:exon

position:962814:1
position: 962814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:963485-963815:1:exon

position:963485:1
position: 963485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963815:1
position: 963815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:966517-966691:1:exon

position:966517:1
position: 966517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966691:1
position: 966691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:967564-967609:1:exon

position:967564:1
position: 967564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967609:1
position: 967609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:969687-969801:1:exon

position:969687:1
position: 969687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:969801:1
position: 969801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:970253-970315:1:exon

position:970253:1
position: 970253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970315:1
position: 970315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:971179-971357:1:exon

position:971179:1
position: 971179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPAG8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: SPAG8
product: sperm associated antigen 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_034788921.1
SIO_010081: SPAG8
subclass of: SO_0000673
so part of: SPAG8
location: join(963467..963815,966517..966691,967564..967609,969687..969801,970253..970315,971179..971357)
location: region:963467-971357:1
so has part: feature:963467-963815:1:exon
so has part: feature:966517-966691:1:exon
so has part: feature:967564-967609:1:exon
so has part: feature:969687-969801:1:exon
so has part: feature:970253-970315:1:exon
so has part: feature:971179-971357:1:exon

position:963467:1
position: 963467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963467-963815:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:966517-966691:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:967564-967609:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:969687-969801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:970253-970315:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:971179-971357:1:exon

SPAG8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SPAG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 8
translation: MPPCHREQSPCMAEMPGEMPPSNAEMEPCLVEMPPCHGEPGGSLGELLPCVVEMLPSKAEMPEEQPRLVSRGKCLVHNWQEERATNELDQVPSPELGSEGFFYRHGHRGLLTLQLLSQLADSTTMKDSYRRPRRTGLPVRGQREAMLELMLYQKYRKETLTELYPPAGPMESLSTTHRHYCKEGFQPVLPPPSRPHDYRLEQPHTFWLESARQLPGVSNIRTSDTPFRRNATFTTPISEYLDQPLPYAPENYPKL
SIO_010081: SPAG8
subclass of: SO_0000673
so part of: SPAG8
location: join(963570..963815,966517..966691,967564..967609,969687..969801,970253..970315,971179..971301)
location: region:963570-971301:1
so has part: feature:963570-963815:1:exon
so has part: feature:966517-966691:1:exon
so has part: feature:967564-967609:1:exon
so has part: feature:969687-969801:1:exon
so has part: feature:970253-970315:1:exon
so has part: feature:971179-971301:1:exon

XP_034644811.1
type: Protein
SIO_000068: ncbiprotein

position:963570:1
position: 963570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971301:1
position: 971301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963570-963815:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:966517-966691:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:967564-967609:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:969687-969801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:970253-970315:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:971179-971301:1:exon

SPAG8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: SPAG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 8
translation: MPPCHREQSPCMAEMPGEMPPSNAEMEPCLVEMPPCHGEPGGSLGELLPCVVEMLPSKAEMPEEQPRLVSRGKCLVHNWQEERATNELDQVPSPELGSEGFFYRHGHRGLLTLQLLSQLADSTTMKDSYRRPRRTGLPVRGQREAMLELMLYQKYRKETLTELYPPAGPMESLSTTHRHYCKEGFQPVLPPPSRPHDYRLEQPHTFWLESARQLPGVSNIRTSDTPFRRNATFTTPISEYLDQPLPYAPENYPKL
SIO_010081: SPAG8
subclass of: SO_0000673
so part of: SPAG8
location: join(963570..963815,966517..966691,967564..967609,969687..969801,970253..970315,971179..971301)
location: region:963570-971301:1
so has part: feature:963570-963815:1:exon
so has part: feature:966517-966691:1:exon
so has part: feature:967564-967609:1:exon
so has part: feature:969687-969801:1:exon
so has part: feature:970253-970315:1:exon
so has part: feature:971179-971301:1:exon

XP_034644812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:963570-963815:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:966517-966691:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:967564-967609:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:969687-969801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:970253-970315:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:971179-971301:1:exon

NPR2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: NPR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(972738..>1015480)
location: region:972738-1015480:-1
so has part: feature:972738-1015480:-1:exon
subclass of: SO_0000010

117886480
type: Gene
SIO_000068: ncbigene

position:972738:-1
position: 972738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015480:-1
position: 1015480
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972738-1015480:-1:exon

NPR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: NPR2
product: natriuretic peptide receptor 2, transcript variant X3
inference: similar to RNA sequence, mRNA (same species):INSD:JW465450.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 852 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_034788347.1
SIO_010081: NPR2
subclass of: SO_0000673
so part of: NPR2
location: complement(join(972738..973638,974100..974191,974421..974519,974666..974840,975098..975166,976183..976306,977229..977375,977979..978147,978774..978929,980715..980874,981359..981430,983442..983546,984351..984425,1000988..1001108,1002678..1002762,1003217..1003349,1003675..1003769,1004115..1004250,1007638..1007751,1015281..>1015480))
location: region:972738-1015480:-1
so has part: feature:1015281-1015480:-1:exon
so has part: feature:1007638-1007751:-1:exon
so has part: feature:1004115-1004250:-1:exon
so has part: feature:1003675-1003769:-1:exon
so has part: feature:1003217-1003349:-1:exon
so has part: feature:1002678-1002762:-1:exon
so has part: feature:1000988-1001108:-1:exon
so has part: feature:984351-984425:-1:exon
so has part: feature:983442-983546:-1:exon
so has part: feature:981359-981430:-1:exon
so has part: feature:980715-980874:-1:exon
so has part: feature:978774-978929:-1:exon
so has part: feature:977979-978147:-1:exon
so has part: feature:977229-977375:-1:exon
so has part: feature:976183-976306:-1:exon
so has part: feature:975098-975166:-1:exon
so has part: feature:974666-974840:-1:exon
so has part: feature:974421-974519:-1:exon
so has part: feature:974100-974191:-1:exon
so has part: feature:972738-973638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1015281-1015480:-1:exon

position:1015281:-1
position: 1015281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1007638-1007751:-1:exon

position:1007638:-1
position: 1007638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007751:-1
position: 1007751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1004115-1004250:-1:exon

position:1004115:-1
position: 1004115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004250:-1
position: 1004250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1003675-1003769:-1:exon

position:1003675:-1
position: 1003675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003769:-1
position: 1003769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1003217-1003349:-1:exon

position:1003217:-1
position: 1003217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003349:-1
position: 1003349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1002678-1002762:-1:exon

position:1002678:-1
position: 1002678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002762:-1
position: 1002762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1000988-1001108:-1:exon

position:1000988:-1
position: 1000988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001108:-1
position: 1001108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:984351-984425:-1:exon

position:984351:-1
position: 984351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984425:-1
position: 984425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:983442-983546:-1:exon

position:983442:-1
position: 983442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983546:-1
position: 983546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:981359-981430:-1:exon

position:981359:-1
position: 981359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981430:-1
position: 981430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:980715-980874:-1:exon

position:980715:-1
position: 980715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980874:-1
position: 980874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:978774-978929:-1:exon

position:978774:-1
position: 978774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978929:-1
position: 978929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:977979-978147:-1:exon

position:977979:-1
position: 977979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978147:-1
position: 978147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:977229-977375:-1:exon

position:977229:-1
position: 977229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977375:-1
position: 977375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:976183-976306:-1:exon

position:976183:-1
position: 976183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976306:-1
position: 976306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:975098-975166:-1:exon

position:975098:-1
position: 975098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975166:-1
position: 975166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:974666-974840:-1:exon

position:974666:-1
position: 974666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974840:-1
position: 974840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:974421-974519:-1:exon

position:974421:-1
position: 974421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974519:-1
position: 974519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:974100-974191:-1:exon

position:974100:-1
position: 974100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974191:-1
position: 974191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:972738-973638:-1:exon

position:973638:-1
position: 973638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NPR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: NPR2
product: natriuretic peptide receptor 2, transcript variant X2
inference: similar to RNA sequence, mRNA (same species):INSD:JW465450.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 852 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_034788346.1
SIO_010081: NPR2
subclass of: SO_0000673
so part of: NPR2
location: complement(join(972738..973638,974100..974191,974421..974519,974666..974840,975098..975166,976183..976306,977229..977375,977979..978147,978774..978929,980715..980874,981359..981430,983442..983546,984088..984165,984351..984425,1000988..1001108,1002678..1002762,1003217..1003349,1003675..1003769,1004115..1004250,1007638..1007751,1015281..>1015480))
location: region:972738-1015480:-1
so has part: feature:1015281-1015480:-1:exon
so has part: feature:1007638-1007751:-1:exon
so has part: feature:1004115-1004250:-1:exon
so has part: feature:1003675-1003769:-1:exon
so has part: feature:1003217-1003349:-1:exon
so has part: feature:1002678-1002762:-1:exon
so has part: feature:1000988-1001108:-1:exon
so has part: feature:984351-984425:-1:exon
so has part: feature:984088-984165:-1:exon
so has part: feature:983442-983546:-1:exon
so has part: feature:981359-981430:-1:exon
so has part: feature:980715-980874:-1:exon
so has part: feature:978774-978929:-1:exon
so has part: feature:977979-978147:-1:exon
so has part: feature:977229-977375:-1:exon
so has part: feature:976183-976306:-1:exon
so has part: feature:975098-975166:-1:exon
so has part: feature:974666-974840:-1:exon
so has part: feature:974421-974519:-1:exon
so has part: feature:974100-974191:-1:exon
so has part: feature:972738-973638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1015281-1015480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1007638-1007751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004115-1004250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1003675-1003769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1003217-1003349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1002678-1002762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1000988-1001108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984351-984425:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:984088-984165:-1:exon

position:984088:-1
position: 984088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984165:-1
position: 984165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:983442-983546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:981359-981430:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:980715-980874:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:978774-978929:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:977979-978147:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:977229-977375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:976183-976306:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:975098-975166:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:974666-974840:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:974421-974519:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:974100-974191:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:972738-973638:-1:exon

NPR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: NPR2
product: natriuretic peptide receptor 2, transcript variant X1
inference: similar to RNA sequence, mRNA (same species):INSD:JW465450.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 852 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_034788345.1
SIO_010081: NPR2
subclass of: SO_0000673
so part of: NPR2
location: complement(join(972738..973638,974100..974191,974421..974519,974666..974840,975098..975166,976183..976306,977229..977375,977979..978147,978774..978929,980715..980874,981359..981430,983442..983546,984088..984264,984351..984425,1000988..1001108,1002678..1002762,1003217..1003349,1003675..1003769,1004115..1004250,1007638..1007751,1015281..>1015480))
location: region:972738-1015480:-1
so has part: feature:1015281-1015480:-1:exon
so has part: feature:1007638-1007751:-1:exon
so has part: feature:1004115-1004250:-1:exon
so has part: feature:1003675-1003769:-1:exon
so has part: feature:1003217-1003349:-1:exon
so has part: feature:1002678-1002762:-1:exon
so has part: feature:1000988-1001108:-1:exon
so has part: feature:984351-984425:-1:exon
so has part: feature:984088-984264:-1:exon
so has part: feature:983442-983546:-1:exon
so has part: feature:981359-981430:-1:exon
so has part: feature:980715-980874:-1:exon
so has part: feature:978774-978929:-1:exon
so has part: feature:977979-978147:-1:exon
so has part: feature:977229-977375:-1:exon
so has part: feature:976183-976306:-1:exon
so has part: feature:975098-975166:-1:exon
so has part: feature:974666-974840:-1:exon
so has part: feature:974421-974519:-1:exon
so has part: feature:974100-974191:-1:exon
so has part: feature:972738-973638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1015281-1015480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1007638-1007751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004115-1004250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1003675-1003769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1003217-1003349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1002678-1002762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1000988-1001108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984351-984425:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:984088-984264:-1:exon

position:984264:-1
position: 984264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:983442-983546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:981359-981430:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:980715-980874:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:978774-978929:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:977979-978147:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:977229-977375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:976183-976306:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:975098-975166:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:974666-974840:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:974421-974519:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:974100-974191:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:972738-973638:-1:exon

NPR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: NPR2
inference: similar to RNA sequence, mRNA (same species):INSD:JW465450.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 700 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: atrial natriuretic peptide receptor 2 isoform X3
translation: MAPPLLLLLAALWAAGRAEPEDANRSLSLAVVLPERNVSYPWAWPRVGPAIRLALEALERGDPPLLPGPLAVRLHFRSSELEGACSEYVAPLNAVDLKLYHDPDVLFGPGCVYPAASVGRFASHWRLPLITAGAVATGFSHKREHYGTTVRTGPSAPKLGAFVSQLHAHFNWSARAALLYADHKTDDRPYYFTIEGVYQELQDALNLTVRYHIYAPDEGGADAAMHFLRASGRVIYICGPLEMLHQIMRLAQRESLTNGDYVFFYVDVFGESLRASATRDALKPWQNKQSQDVGLRQAFQTVLVITYHEPQNPEYQHFQTQLILRAKEEFKVELGYSLMNLVAGCFYDGVLLYAMALNETLAEGGSKKDGTRIVQKMRDRKFQGVTGLVSMDGNNDRDTDFSLWAMGDPESGEYEVAGHYAGAEKKLNWLGRPIRWVKGAPPLDNPPCVFDVDDPSCDKTPLSTLAIVALGTGLTLVMFGISSFLIFRKLMLEKELASMLWRIRWDELQFGNAERYYKGAGSRLTLSLRGSSYGSLMTAHGKYQIFANTGHFKMRDIQFNHLTRFIGACIDPPNVCIVTEYCPRGSLQDILENDSINLDWMFRYSLINDIVKGMAFLHNSIIGHHGSLKSSNCVVDSRFVLKITDYGLASFRSSCDAEDSHALYAKKLWTAPELLQQGRLPPPGMQKADVYSFSIILQEIALRNGPFYIEGMDLSPKEIVQKVRNSQKPYFRPSIDLGLHSEELAVLMERCWAQEPAERPDFTQLKIFIRRFNKEGSTSILDNLLSRMEQYANNLEKLVEERTQAYLEEKRKAENLLYQILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLYTCFDAIIDNFDVYKVETIGDAYMVVSGLPVRNGKLHANEIVRMALALLEAVKTFKIRHRPNDQLRLRIGIHTGPVCAGVVGLKMPRYCLFGDTVNTASRMESNGQALKIHISSTTKEVLDEFGCFELELRGDVEMKGKGKMRTYWLLGERTDDSII
SIO_010081: NPR2
subclass of: SO_0000673
so part of: NPR2
location: complement(join(973576..973638,974100..974191,974421..974519,974666..974840,975098..975166,976183..976306,977229..977375,977979..978147,978774..978929,980715..980874,981359..981430,983442..983546,984351..984425,1000988..1001108,1002678..1002762,1003217..1003349,1003675..1003769,1004115..1004250,1007638..1007751,1015281..>1015480))
location: region:973576-1015480:-1
so has part: feature:1015281-1015480:-1:exon
so has part: feature:1007638-1007751:-1:exon
so has part: feature:1004115-1004250:-1:exon
so has part: feature:1003675-1003769:-1:exon
so has part: feature:1003217-1003349:-1:exon
so has part: feature:1002678-1002762:-1:exon
so has part: feature:1000988-1001108:-1:exon
so has part: feature:984351-984425:-1:exon
so has part: feature:983442-983546:-1:exon
so has part: feature:981359-981430:-1:exon
so has part: feature:980715-980874:-1:exon
so has part: feature:978774-978929:-1:exon
so has part: feature:977979-978147:-1:exon
so has part: feature:977229-977375:-1:exon
so has part: feature:976183-976306:-1:exon
so has part: feature:975098-975166:-1:exon
so has part: feature:974666-974840:-1:exon
so has part: feature:974421-974519:-1:exon
so has part: feature:974100-974191:-1:exon
so has part: feature:973576-973638:-1:exon

XP_034644238.1
type: Protein
SIO_000068: ncbiprotein

position:973576:-1
position: 973576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1015281-1015480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1007638-1007751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004115-1004250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1003675-1003769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1003217-1003349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1002678-1002762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1000988-1001108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984351-984425:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:983442-983546:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:981359-981430:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:980715-980874:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:978774-978929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:977979-978147:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:977229-977375:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:976183-976306:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:975098-975166:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:974666-974840:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:974421-974519:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:974100-974191:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:973576-973638:-1:exon

NPR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: NPR2
inference: similar to RNA sequence, mRNA (same species):INSD:JW465450.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 700 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: atrial natriuretic peptide receptor 2 isoform X2
translation: MAPPLLLLLAALWAAGRAEPEDANRSLSLAVVLPERNVSYPWAWPRVGPAIRLALEALERGDPPLLPGPLAVRLHFRSSELEGACSEYVAPLNAVDLKLYHDPDVLFGPGCVYPAASVGRFASHWRLPLITAGAVATGFSHKREHYGTTVRTGPSAPKLGAFVSQLHAHFNWSARAALLYADHKTDDRPYYFTIEGVYQELQDALNLTVRYHIYAPDEGGADAAMHFLRASGRVIYICGPLEMLHQIMRLAQRESLTNGDYVFFYVDVFGESLRASATRDALKPWQNKQSQDVGLRQAFQTVLVITYHEPQNPEYQHFQTQLILRAKEEFKVELGYSLMNLVAGCFYDGVLLYAMALNETLAEGGSKKDGTRIVQKMRDRKFQGVTGLVSMDGNNDRDTDFSLWAMGDPESGEYEVAGHYAGAEKKLNWLGRPIRWVKGAPPLDNPPCVFDVDDPSCDKTPLSTLAIVALGTGLTLVMFGISSFLIFRKLMLEKELASMLWRIRWDELQFGNAERYYKGAGSRLTLSLRGSSYGSLMTAHGKYQIFANTGHFKGNVVAIKHVNKKRIELTRQVLFELKHMRDIQFNHLTRFIGACIDPPNVCIVTEYCPRGSLQDILENDSINLDWMFRYSLINDIVKGMAFLHNSIIGHHGSLKSSNCVVDSRFVLKITDYGLASFRSSCDAEDSHALYAKKLWTAPELLQQGRLPPPGMQKADVYSFSIILQEIALRNGPFYIEGMDLSPKEIVQKVRNSQKPYFRPSIDLGLHSEELAVLMERCWAQEPAERPDFTQLKIFIRRFNKEGSTSILDNLLSRMEQYANNLEKLVEERTQAYLEEKRKAENLLYQILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLYTCFDAIIDNFDVYKVETIGDAYMVVSGLPVRNGKLHANEIVRMALALLEAVKTFKIRHRPNDQLRLRIGIHTGPVCAGVVGLKMPRYCLFGDTVNTASRMESNGQALKIHISSTTKEVLDEFGCFELELRGDVEMKGKGKMRTYWLLGERTDDSII
SIO_010081: NPR2
subclass of: SO_0000673
so part of: NPR2
location: complement(join(973576..973638,974100..974191,974421..974519,974666..974840,975098..975166,976183..976306,977229..977375,977979..978147,978774..978929,980715..980874,981359..981430,983442..983546,984088..984165,984351..984425,1000988..1001108,1002678..1002762,1003217..1003349,1003675..1003769,1004115..1004250,1007638..1007751,1015281..>1015480))
location: region:973576-1015480:-1
so has part: feature:1015281-1015480:-1:exon
so has part: feature:1007638-1007751:-1:exon
so has part: feature:1004115-1004250:-1:exon
so has part: feature:1003675-1003769:-1:exon
so has part: feature:1003217-1003349:-1:exon
so has part: feature:1002678-1002762:-1:exon
so has part: feature:1000988-1001108:-1:exon
so has part: feature:984351-984425:-1:exon
so has part: feature:984088-984165:-1:exon
so has part: feature:983442-983546:-1:exon
so has part: feature:981359-981430:-1:exon
so has part: feature:980715-980874:-1:exon
so has part: feature:978774-978929:-1:exon
so has part: feature:977979-978147:-1:exon
so has part: feature:977229-977375:-1:exon
so has part: feature:976183-976306:-1:exon
so has part: feature:975098-975166:-1:exon
so has part: feature:974666-974840:-1:exon
so has part: feature:974421-974519:-1:exon
so has part: feature:974100-974191:-1:exon
so has part: feature:973576-973638:-1:exon

XP_034644237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1015281-1015480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1007638-1007751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004115-1004250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1003675-1003769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1003217-1003349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1002678-1002762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1000988-1001108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984351-984425:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:984088-984165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:983442-983546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:981359-981430:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:980715-980874:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:978774-978929:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:977979-978147:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:977229-977375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:976183-976306:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:975098-975166:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:974666-974840:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:974421-974519:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:974100-974191:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:973576-973638:-1:exon

NPR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: NPR2
inference: similar to RNA sequence, mRNA (same species):INSD:JW465450.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 700 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: atrial natriuretic peptide receptor 2 isoform X1
translation: MAPPLLLLLAALWAAGRAEPEDANRSLSLAVVLPERNVSYPWAWPRVGPAIRLALEALERGDPPLLPGPLAVRLHFRSSELEGACSEYVAPLNAVDLKLYHDPDVLFGPGCVYPAASVGRFASHWRLPLITAGAVATGFSHKREHYGTTVRTGPSAPKLGAFVSQLHAHFNWSARAALLYADHKTDDRPYYFTIEGVYQELQDALNLTVRYHIYAPDEGGADAAMHFLRASGRVIYICGPLEMLHQIMRLAQRESLTNGDYVFFYVDVFGESLRASATRDALKPWQNKQSQDVGLRQAFQTVLVITYHEPQNPEYQHFQTQLILRAKEEFKVELGYSLMNLVAGCFYDGVLLYAMALNETLAEGGSKKDGTRIVQKMRDRKFQGVTGLVSMDGNNDRDTDFSLWAMGDPESGEYEVAGHYAGAEKKLNWLGRPIRWVKGAPPLDNPPCVFDVDDPSCDKTPLSTLAIVALGTGLTLVMFGISSFLIFRKLMLEKELASMLWRIRWDELQFGNAERYYKGAGSRLTLSLRGSSYGSLMTAHGKYQIFANTGHFKGNVVFKRHPRLPRPLALTSRPCGADPVPVPGPQGNVVAIKHVNKKRIELTRQVLFELKHMRDIQFNHLTRFIGACIDPPNVCIVTEYCPRGSLQDILENDSINLDWMFRYSLINDIVKGMAFLHNSIIGHHGSLKSSNCVVDSRFVLKITDYGLASFRSSCDAEDSHALYAKKLWTAPELLQQGRLPPPGMQKADVYSFSIILQEIALRNGPFYIEGMDLSPKEIVQKVRNSQKPYFRPSIDLGLHSEELAVLMERCWAQEPAERPDFTQLKIFIRRFNKEGSTSILDNLLSRMEQYANNLEKLVEERTQAYLEEKRKAENLLYQILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLYTCFDAIIDNFDVYKVETIGDAYMVVSGLPVRNGKLHANEIVRMALALLEAVKTFKIRHRPNDQLRLRIGIHTGPVCAGVVGLKMPRYCLFGDTVNTASRMESNGQALKIHISSTTKEVLDEFGCFELELRGDVEMKGKGKMRTYWLLGERTDDSII
SIO_010081: NPR2
subclass of: SO_0000673
so part of: NPR2
location: complement(join(973576..973638,974100..974191,974421..974519,974666..974840,975098..975166,976183..976306,977229..977375,977979..978147,978774..978929,980715..980874,981359..981430,983442..983546,984088..984264,984351..984425,1000988..1001108,1002678..1002762,1003217..1003349,1003675..1003769,1004115..1004250,1007638..1007751,1015281..>1015480))
location: region:973576-1015480:-1
so has part: feature:1015281-1015480:-1:exon
so has part: feature:1007638-1007751:-1:exon
so has part: feature:1004115-1004250:-1:exon
so has part: feature:1003675-1003769:-1:exon
so has part: feature:1003217-1003349:-1:exon
so has part: feature:1002678-1002762:-1:exon
so has part: feature:1000988-1001108:-1:exon
so has part: feature:984351-984425:-1:exon
so has part: feature:984088-984264:-1:exon
so has part: feature:983442-983546:-1:exon
so has part: feature:981359-981430:-1:exon
so has part: feature:980715-980874:-1:exon
so has part: feature:978774-978929:-1:exon
so has part: feature:977979-978147:-1:exon
so has part: feature:977229-977375:-1:exon
so has part: feature:976183-976306:-1:exon
so has part: feature:975098-975166:-1:exon
so has part: feature:974666-974840:-1:exon
so has part: feature:974421-974519:-1:exon
so has part: feature:974100-974191:-1:exon
so has part: feature:973576-973638:-1:exon

XP_034644236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1015281-1015480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1007638-1007751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004115-1004250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1003675-1003769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1003217-1003349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1002678-1002762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1000988-1001108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984351-984425:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:984088-984264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:983442-983546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:981359-981430:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:980715-980874:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:978774-978929:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:977979-978147:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:977229-977375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:976183-976306:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:975098-975166:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:974666-974840:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:974421-974519:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:974100-974191:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:973576-973638:-1:exon

MSMP
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: MSMP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1130168..1132628
location: region:1130168-1132628:1
so has part: feature:1130168-1132628:1:exon
subclass of: SO_0000010

117886826
type: Gene
SIO_000068: ncbigene

position:1130168:1
position: 1130168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132628:1
position: 1132628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1130168-1132628:1:exon

MSMP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: MSMP
product: microseminoprotein, prostate associated
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034788895.1
SIO_010081: MSMP
subclass of: SO_0000673
so part of: MSMP
location: join(1130168..1130820,1131617..1131725,1132364..1132628)
location: region:1130168-1132628:1
so has part: feature:1130168-1130820:1:exon
so has part: feature:1131617-1131725:1:exon
so has part: feature:1132364-1132628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1130168-1130820:1:exon

position:1130820:1
position: 1130820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1131617-1131725:1:exon

position:1131617:1
position: 1131617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131725:1
position: 1131725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1132364-1132628:1:exon

position:1132364:1
position: 1132364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MSMP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: MSMP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostate-associated microseminoprotein
translation: MARKVQKVARVWGRICLLVSFLLQLQGSQAKCYFQAQAPCHYEGKQFTLGESWLSTTCLLCTCLHPVGVGCCEITQHPIDFPDWCMAHYDSQTCQISVVQKANPSLPCVNSMEREWGSAGTPEPMINKVLETRLSR
SIO_010081: MSMP
subclass of: SO_0000673
so part of: MSMP
location: join(1130709..1130820,1131617..1131725,1132364..1132553)
location: region:1130709-1132553:1
so has part: feature:1130709-1130820:1:exon
so has part: feature:1131617-1131725:1:exon
so has part: feature:1132364-1132553:1:exon

XP_034644786.1
type: Protein
SIO_000068: ncbiprotein

position:1130709:1
position: 1130709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132553:1
position: 1132553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1130709-1130820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1131617-1131725:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132364-1132553:1:exon

RGP1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: RGP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1134302..>1138831)
location: region:1134302-1138831:-1
so has part: feature:1134302-1138831:-1:exon
subclass of: SO_0000010

117886483
type: Gene
SIO_000068: ncbigene

position:1134302:-1
position: 1134302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138831:-1
position: 1138831
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134302-1138831:-1:exon

RGP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: RGP1
product: RGP1 homolog, RAB6A GEF complex partner 1
inference: similar to RNA sequence, mRNA (same species):INSD:JW319279.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 282 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_034788351.1
SIO_010081: RGP1
subclass of: SO_0000673
so part of: RGP1
location: complement(join(1134302..1135629,1135893..1136070,1136343..1136470,1136886..1137032,1137115..1137264,1138174..1138257,1138695..>1138831))
location: region:1134302-1138831:-1
so has part: feature:1138695-1138831:-1:exon
so has part: feature:1138174-1138257:-1:exon
so has part: feature:1137115-1137264:-1:exon
so has part: feature:1136886-1137032:-1:exon
so has part: feature:1136343-1136470:-1:exon
so has part: feature:1135893-1136070:-1:exon
so has part: feature:1134302-1135629:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1138695-1138831:-1:exon

position:1138695:-1
position: 1138695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1138174-1138257:-1:exon

position:1138174:-1
position: 1138174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138257:-1
position: 1138257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1137115-1137264:-1:exon

position:1137115:-1
position: 1137115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137264:-1
position: 1137264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1136886-1137032:-1:exon

position:1136886:-1
position: 1136886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137032:-1
position: 1137032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1136343-1136470:-1:exon

position:1136343:-1
position: 1136343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136470:-1
position: 1136470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1135893-1136070:-1:exon

position:1135893:-1
position: 1135893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136070:-1
position: 1136070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1134302-1135629:-1:exon

position:1135629:-1
position: 1135629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RGP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: RGP1
inference: similar to RNA sequence, mRNA (same species):INSD:JW319279.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 116 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 2
product: RAB6A-GEF complex partner protein 2
translation: MIEVLAQLSRGPVFLAGEMLECGIVFTNPLSAASTSASSEMLAWASAQIHCQFHSSENRVALPPSDDSKHDVQAENETVFVPNRGERGQCILSTPPKILFCDLRLDPGESKSYSYCETLPVDGPPSFRGQSVKYVYKLTIGCQRVNSPIKLLRVPFRVLVLHGLKDYQFPQDEVVAPSNPFLEEEEGVKKDSRLADLATELLMAATSRRSLHVYNISNTRGKVGKFGIFKTVYKIGEDILGTFNFSEGDIPCLQYSVSLQTEESIQEEFQRRHGQPVSYSTHARHQESCLHTARSSFSLPVPLSSTPSFTTNIVSLKWRLHFEFVTSRESGEAHTVPENPSETITWTGVEQIEVDTFSWDLPIKVLPTNPVLASYVSQFSSTNSITI
SIO_010081: RGP1
subclass of: SO_0000673
so part of: RGP1
location: complement(join(1135406..1135629,1135893..1136070,1136343..1136470,1136886..1137032,1137115..1137264,1138174..1138257,1138695..>1138831))
location: region:1135406-1138831:-1
so has part: feature:1138695-1138831:-1:exon
so has part: feature:1138174-1138257:-1:exon
so has part: feature:1137115-1137264:-1:exon
so has part: feature:1136886-1137032:-1:exon
so has part: feature:1136343-1136470:-1:exon
so has part: feature:1135893-1136070:-1:exon
so has part: feature:1135406-1135629:-1:exon

XP_034644242.1
type: Protein
SIO_000068: ncbiprotein

position:1135406:-1
position: 1135406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1138695-1138831:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138174-1138257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137115-1137264:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1136886-1137032:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136343-1136470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1135893-1136070:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1135406-1135629:-1:exon

GBA2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: GBA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1167270..1200246
location: region:1167270-1200246:1
so has part: feature:1167270-1200246:1:exon
subclass of: SO_0000010

117886484
type: Gene
SIO_000068: ncbigene

position:1167270:1
position: 1167270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200246:1
position: 1200246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1167270-1200246:1:exon

GBA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: GBA2
product: glucosylceramidase beta 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_034788352.1
SIO_010081: GBA2
subclass of: SO_0000673
so part of: GBA2
location: join(1167270..1167478,1168270..1168385,1169865..1170083,1172914..1173153,1173763..1173865,1188342..1188495,1189516..1189641,1190547..1190731,1191099..1191203,1191829..1191936,1193116..1193267,1193435..1193541,1195589..1195731,1195967..1196082,1199633..1199824,1199903..1200246)
location: region:1167270-1200246:1
so has part: feature:1167270-1167478:1:exon
so has part: feature:1168270-1168385:1:exon
so has part: feature:1169865-1170083:1:exon
so has part: feature:1172914-1173153:1:exon
so has part: feature:1173763-1173865:1:exon
so has part: feature:1188342-1188495:1:exon
so has part: feature:1189516-1189641:1:exon
so has part: feature:1190547-1190731:1:exon
so has part: feature:1191099-1191203:1:exon
so has part: feature:1191829-1191936:1:exon
so has part: feature:1193116-1193267:1:exon
so has part: feature:1193435-1193541:1:exon
so has part: feature:1195589-1195731:1:exon
so has part: feature:1195967-1196082:1:exon
so has part: feature:1199633-1199824:1:exon
so has part: feature:1199903-1200246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1167270-1167478:1:exon

position:1167478:1
position: 1167478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1168270-1168385:1:exon

position:1168270:1
position: 1168270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168385:1
position: 1168385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1169865-1170083:1:exon

position:1169865:1
position: 1169865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170083:1
position: 1170083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1172914-1173153:1:exon

position:1172914:1
position: 1172914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173153:1
position: 1173153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1173763-1173865:1:exon

position:1173763:1
position: 1173763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173865:1
position: 1173865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1188342-1188495:1:exon

position:1188342:1
position: 1188342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188495:1
position: 1188495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1189516-1189641:1:exon

position:1189516:1
position: 1189516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189641:1
position: 1189641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1190547-1190731:1:exon

position:1190547:1
position: 1190547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1190731:1
position: 1190731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1191099-1191203:1:exon

position:1191099:1
position: 1191099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1191203:1
position: 1191203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1191829-1191936:1:exon

position:1191829:1
position: 1191829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1191936:1
position: 1191936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1193116-1193267:1:exon

position:1193116:1
position: 1193116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193267:1
position: 1193267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1193435-1193541:1:exon

position:1193435:1
position: 1193435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193541:1
position: 1193541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1195589-1195731:1:exon

position:1195589:1
position: 1195589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195731:1
position: 1195731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1195967-1196082:1:exon

position:1195967:1
position: 1195967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196082:1
position: 1196082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1199633-1199824:1:exon

position:1199633:1
position: 1199633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199824:1
position: 1199824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1199903-1200246:1:exon

position:1199903:1
position: 1199903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GBA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: GBA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: non-lysosomal glucosylceramidase
translation: MLTLRNGTGTKEDKSGGHWNEPFSLEKEGARVSGVLLHHCSPVNPYTLAISAREQAGTEVTHFTAFNPAGTGQAVWQDLLQDGRLGSPAGKGSPTEKGEVTAAAVCATCTVPPRGHRTLELGMAWDMPRIHFGSKEKLHLRRYTRYFGSAGDACPALSHYALTHYEQWEEKIESWQRPILESSHLPPWYKSALFNELYFVADGGTLWLELPPEACAEDVQGPAGTGLSQIFPVLREYGRFAYLEGQEYRMYNTYDVHFYASFALAMLWPKLEISLQYDIAAAVLNEDTQPRLYLMNGQTAQVKLKNVVPHDIGEPEDEPWQRVNAYLIHDTAGWKDLNLKFVLQVYRDYYLTQDTAYLQDMWPVCQAVMDSELKFDTDDDGLIENSGFADQTYDAWVATGASAYCGSLWLAAVCVMCKVAGIVGDSEVLQKYSAIRRKGSEAFERLLWNGKYYNYDSSGGPFSSTVMSDQCAGQWFLRASGLDQGEFQVFPRSHVVSALKTIFELNVMGFGNGTMGAVNGMRPDGSLDTSSVQSSEAWVGVVYALAATMIQEGLVQEGFHTAEGCYRTVWERLGMAFQTPEAYCQRKLFRSLAYMRPLSIWSMQLALESRAGQAPAAAAPRPVQENSLQP
SIO_010081: GBA2
subclass of: SO_0000673
so part of: GBA2
location: join(1172989..1173153,1173763..1173865,1188342..1188495,1189516..1189641,1190547..1190731,1191099..1191203,1191829..1191936,1193116..1193267,1193435..1193541,1195589..1195731,1195967..1196082,1199633..1199824,1199903..1200139)
location: region:1172989-1200139:1
so has part: feature:1172989-1173153:1:exon
so has part: feature:1173763-1173865:1:exon
so has part: feature:1188342-1188495:1:exon
so has part: feature:1189516-1189641:1:exon
so has part: feature:1190547-1190731:1:exon
so has part: feature:1191099-1191203:1:exon
so has part: feature:1191829-1191936:1:exon
so has part: feature:1193116-1193267:1:exon
so has part: feature:1193435-1193541:1:exon
so has part: feature:1195589-1195731:1:exon
so has part: feature:1195967-1196082:1:exon
so has part: feature:1199633-1199824:1:exon
so has part: feature:1199903-1200139:1:exon

XP_034644243.1
type: Protein
SIO_000068: ncbiprotein

position:1172989:1
position: 1172989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200139:1
position: 1200139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172989-1173153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1173763-1173865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1188342-1188495:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189516-1189641:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1190547-1190731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1191099-1191203:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1191829-1191936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1193116-1193267:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1193435-1193541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1195589-1195731:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1195967-1196082:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1199633-1199824:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1199903-1200139:1:exon

LOC117886822
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117886822
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1241720..1266929)
location: region:1241720-1266929:-1
so has part: feature:1241720-1266929:-1:exon
subclass of: SO_0000010

117886822
type: Gene
SIO_000068: ncbigene

position:1241720:-1
position: 1241720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1266929:-1
position: 1266929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241720-1266929:-1:exon

LOC117886822
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117886822
product: carbohydrate sulfotransferase 5-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_034788887.1
SIO_010081: LOC117886822
subclass of: SO_0000673
so part of: LOC117886822
location: complement(join(1241720..1244263,1266600..1266929))
location: region:1241720-1266929:-1
so has part: feature:1266600-1266929:-1:exon
so has part: feature:1241720-1244263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1266600-1266929:-1:exon

position:1266600:-1
position: 1266600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1241720-1244263:-1:exon

position:1244263:-1
position: 1244263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117886822
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: LOC117886822
product: carbohydrate sulfotransferase 5-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034788888.1
SIO_010081: LOC117886822
subclass of: SO_0000673
so part of: LOC117886822
location: complement(join(1241720..1244263,1244840..1244975))
location: region:1241720-1244975:-1
so has part: feature:1244840-1244975:-1:exon
so has part: feature:1241720-1244263:-1:exon

position:1244975:-1
position: 1244975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1244840-1244975:-1:exon

position:1244840:-1
position: 1244840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1241720-1244263:-1:exon

LOC117886822
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117886822
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5-like
translation: MMRLRISSTIVVVFLMIQTGFLLFMYAQRSSFMPQSEEKPSRVHILILSSWRSGSSFVGQLFSQHPDVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFKCDMSVFDAYMPWKRNLSDLFQWAVSRALCSAPACDSFQRTDITNEMACKTLCGKYPFSKVEEACKTYSHIVLKEVRFFDLTVLYPLLTDLSLNLKIIHLVRDPRAVAKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEICRSHVQIYETATQKPPRFLKDRYLMIRFEDLVQDPLSEIRDMYTFADLRLTPRLESWIYNITHGQGPGKKREAFKITSRDAVNVSQAWRNILSFQKIKKVQEVCKGAINMLGYKLLDSEKEQKDLSLDLVLPRQRNQFSWSPFNLKN
SIO_010081: LOC117886822
subclass of: SO_0000673
so part of: LOC117886822
location: complement(1243055..1244236)
location: region:1243055-1244236:-1
so has part: feature:1243055-1244236:-1:exon

XP_034644778.1
type: Protein
SIO_000068: ncbiprotein

position:1243055:-1
position: 1243055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244236:-1
position: 1244236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1243055-1244236:-1:exon

LOC117886822
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: LOC117886822
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5-like
translation: MMRLRISSTIVVVFLMIQTGFLLFMYAQRSSFMPQSEEKPSRVHILILSSWRSGSSFVGQLFSQHPDVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFKCDMSVFDAYMPWKRNLSDLFQWAVSRALCSAPACDSFQRTDITNEMACKTLCGKYPFSKVEEACKTYSHIVLKEVRFFDLTVLYPLLTDLSLNLKIIHLVRDPRAVAKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEICRSHVQIYETATQKPPRFLKDRYLMIRFEDLVQDPLSEIRDMYTFADLRLTPRLESWIYNITHGQGPGKKREAFKITSRDAVNVSQAWRNILSFQKIKKVQEVCKGAINMLGYKLLDSEKEQKDLSLDLVLPRQRNQFSWSPFNLKN
SIO_010081: LOC117886822
subclass of: SO_0000673
so part of: LOC117886822
location: complement(1243055..1244236)
location: region:1243055-1244236:-1
so has part: feature:1243055-1244236:-1:exon

XP_034644779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1243055-1244236:-1:exon

TMEM231
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1282200..1305646)
location: region:1282200-1305646:-1
so has part: feature:1282200-1305646:-1:exon
subclass of: SO_0000010

117886417
type: Gene
SIO_000068: ncbigene

position:1282200:-1
position: 1282200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305646:-1
position: 1305646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282200-1305646:-1:exon

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TMEM231
product: transmembrane protein 231, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034788193.1
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(1282200..1283091,1283518..1283623,1283770..1283851,1284131..1284274,1286855..1286983,1288711..1288880,1305331..1305646))
location: region:1282200-1305646:-1
so has part: feature:1305331-1305646:-1:exon
so has part: feature:1288711-1288880:-1:exon
so has part: feature:1286855-1286983:-1:exon
so has part: feature:1284131-1284274:-1:exon
so has part: feature:1283770-1283851:-1:exon
so has part: feature:1283518-1283623:-1:exon
so has part: feature:1282200-1283091:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305331-1305646:-1:exon

position:1305331:-1
position: 1305331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1288711-1288880:-1:exon

position:1288711:-1
position: 1288711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288880:-1
position: 1288880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1286855-1286983:-1:exon

position:1286855:-1
position: 1286855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286983:-1
position: 1286983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1284131-1284274:-1:exon

position:1284131:-1
position: 1284131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284274:-1
position: 1284274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1283770-1283851:-1:exon

position:1283770:-1
position: 1283770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283851:-1
position: 1283851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1283518-1283623:-1:exon

position:1283518:-1
position: 1283518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283623:-1
position: 1283623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1282200-1283091:-1:exon

position:1283091:-1
position: 1283091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TMEM231
product: transmembrane protein 231, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_034788192.1
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(1282200..1283091,1283518..1283623,1283770..1283851,1284131..1284274,1286855..1286983,1288711..1288880,1291339..1291425))
location: region:1282200-1291425:-1
so has part: feature:1291339-1291425:-1:exon
so has part: feature:1288711-1288880:-1:exon
so has part: feature:1286855-1286983:-1:exon
so has part: feature:1284131-1284274:-1:exon
so has part: feature:1283770-1283851:-1:exon
so has part: feature:1283518-1283623:-1:exon
so has part: feature:1282200-1283091:-1:exon

position:1291425:-1
position: 1291425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291339-1291425:-1:exon

position:1291339:-1
position: 1291339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1288711-1288880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286855-1286983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284131-1284274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1283770-1283851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1283518-1283623:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1282200-1283091:-1:exon

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TMEM231
product: transmembrane protein 231, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_034788190.1
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(1282200..1283091,1283518..1283623,1283770..1283851,1284131..1284274,1286855..1286983,1288711..1288880,1290372..1290581))
location: region:1282200-1290581:-1
so has part: feature:1290372-1290581:-1:exon
so has part: feature:1288711-1288880:-1:exon
so has part: feature:1286855-1286983:-1:exon
so has part: feature:1284131-1284274:-1:exon
so has part: feature:1283770-1283851:-1:exon
so has part: feature:1283518-1283623:-1:exon
so has part: feature:1282200-1283091:-1:exon

position:1290581:-1
position: 1290581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290372-1290581:-1:exon

position:1290372:-1
position: 1290372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1288711-1288880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286855-1286983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284131-1284274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1283770-1283851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1283518-1283623:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1282200-1283091:-1:exon

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231 isoform X1
translation: MAQLELFSHPGPGVRYRAGLCSTAALGLLLLWALTYLPPLLVAYRSQGLWLKQSTYMEQPTVQFQYEVLLVATTGADPGSFLAWSTFPAFNHLQEDQLRVPLISTREEDKNHDGKMDQLHFKLELPLQSTEQVLAVQLILTFSYQLHRMSTFVMQSMAFIQSSSPIPGSQLYVNGDLKLHQRQSLSHCGVDIRYNVSVINGTSPFASDYDLTNIIAAYQDRNVTTVLSDSNPVWLVGRAADAPFVINATIRYPVEVILYQPGFWEMIKFAWIQYVSILLIFLWVFDRIKIFVFQNQVLTTIPVLPVSSYKQHQS
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(1282920..1283091,1283518..1283623,1283770..1283851,1284131..1284274,1286855..1286983,1288711..1288880,1290372..1290513))
location: region:1282920-1290513:-1
so has part: feature:1290372-1290513:-1:exon
so has part: feature:1288711-1288880:-1:exon
so has part: feature:1286855-1286983:-1:exon
so has part: feature:1284131-1284274:-1:exon
so has part: feature:1283770-1283851:-1:exon
so has part: feature:1283518-1283623:-1:exon
so has part: feature:1282920-1283091:-1:exon

XP_034644081.1
type: Protein
SIO_000068: ncbiprotein

position:1282920:-1
position: 1282920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290513:-1
position: 1290513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290372-1290513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1288711-1288880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286855-1286983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284131-1284274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1283770-1283851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1283518-1283623:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1282920-1283091:-1:exon

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231 isoform X2
translation: MEQPTVQFQYEVLLVATTGADPGSFLAWSTFPAFNHLQEDQLRVPLISTREEDKNHDGKMDQLHFKLELPLQSTEQVLAVQLILTFSYQLHRMSTFVMQSMAFIQSSSPIPGSQLYVNGDLKLHQRQSLSHCGVDIRYNVSVINGTSPFASDYDLTNIIAAYQDRNVTTVLSDSNPVWLVGRAADAPFVINATIRYPVEVILYQPGFWEMIKFAWIQYVSILLIFLWVFDRIKIFVFQNQVLTTIPVLPVSSYKQHQS
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(1282920..1283091,1283518..1283623,1283770..1283851,1284131..1284274,1286855..1286983,1288711..1288854))
location: region:1282920-1288854:-1
so has part: feature:1288711-1288854:-1:exon
so has part: feature:1286855-1286983:-1:exon
so has part: feature:1284131-1284274:-1:exon
so has part: feature:1283770-1283851:-1:exon
so has part: feature:1283518-1283623:-1:exon
so has part: feature:1282920-1283091:-1:exon

XP_034644083.1
type: Protein
SIO_000068: ncbiprotein

position:1288854:-1
position: 1288854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288711-1288854:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286855-1286983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1284131-1284274:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283770-1283851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1283518-1283623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1282920-1283091:-1:exon

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231 isoform X2
translation: MEQPTVQFQYEVLLVATTGADPGSFLAWSTFPAFNHLQEDQLRVPLISTREEDKNHDGKMDQLHFKLELPLQSTEQVLAVQLILTFSYQLHRMSTFVMQSMAFIQSSSPIPGSQLYVNGDLKLHQRQSLSHCGVDIRYNVSVINGTSPFASDYDLTNIIAAYQDRNVTTVLSDSNPVWLVGRAADAPFVINATIRYPVEVILYQPGFWEMIKFAWIQYVSILLIFLWVFDRIKIFVFQNQVLTTIPVLPVSSYKQHQS
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(1282920..1283091,1283518..1283623,1283770..1283851,1284131..1284274,1286855..1286983,1288711..1288854))
location: region:1282920-1288854:-1
so has part: feature:1288711-1288854:-1:exon
so has part: feature:1286855-1286983:-1:exon
so has part: feature:1284131-1284274:-1:exon
so has part: feature:1283770-1283851:-1:exon
so has part: feature:1283518-1283623:-1:exon
so has part: feature:1282920-1283091:-1:exon

XP_034644084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1288711-1288854:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286855-1286983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1284131-1284274:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283770-1283851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1283518-1283623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1282920-1283091:-1:exon

GABARAPL2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: GABARAPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1291526..1319760
location: region:1291526-1319760:1
so has part: feature:1291526-1319760:1:exon
subclass of: SO_0000010

117886418
type: Gene
SIO_000068: ncbigene

position:1291526:1
position: 1291526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319760:1
position: 1319760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291526-1319760:1:exon

GABARAPL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: GABARAPL2
product: GABA type A receptor associated protein like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_034788194.1
SIO_010081: GABARAPL2
subclass of: SO_0000673
so part of: GABARAPL2
location: join(1291526..1291710,1292248..1292303,1314672..1314844,1319166..1319760)
location: region:1291526-1319760:1
so has part: feature:1291526-1291710:1:exon
so has part: feature:1292248-1292303:1:exon
so has part: feature:1314672-1314844:1:exon
so has part: feature:1319166-1319760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1291526-1291710:1:exon

position:1291710:1
position: 1291710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1292248-1292303:1:exon

position:1292248:1
position: 1292248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292303:1
position: 1292303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1314672-1314844:1:exon

position:1314672:1
position: 1314672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314844:1
position: 1314844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1319166-1319760:1:exon

position:1319166:1
position: 1319166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GABARAPL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: GABARAPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor-associated protein-like 2
translation: MKWMFKEDHALEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFGF
SIO_010081: GABARAPL2
subclass of: SO_0000673
so part of: GABARAPL2
location: join(1291677..1291710,1292248..1292303,1314672..1314844,1319166..1319256)
location: region:1291677-1319256:1
so has part: feature:1291677-1291710:1:exon
so has part: feature:1292248-1292303:1:exon
so has part: feature:1314672-1314844:1:exon
so has part: feature:1319166-1319256:1:exon

XP_034644085.1
type: Protein
SIO_000068: ncbiprotein

position:1291677:1
position: 1291677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319256:1
position: 1319256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291677-1291710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1292248-1292303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1314672-1314844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1319166-1319256:1:exon

ADAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1326215..1377200)
location: region:1326215-1377200:-1
so has part: feature:1326215-1377200:-1:exon
subclass of: SO_0000010

117886415
type: Gene
SIO_000068: ncbigene

position:1326215:-1
position: 1326215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1377200:-1
position: 1377200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1326215-1377200:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034788186.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1326215..1326689,1347031..1347130,1350391..1350536,1352549..1353185,1365146..1365360,1366105..1366159,1371269..1371337,1376071..1376262,1376817..1377197))
location: region:1326215-1377197:-1
so has part: feature:1376817-1377197:-1:exon
so has part: feature:1376071-1376262:-1:exon
so has part: feature:1371269-1371337:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365146-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1326215-1326689:-1:exon

position:1377197:-1
position: 1377197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376817-1377197:-1:exon

position:1376817:-1
position: 1376817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1376071-1376262:-1:exon

position:1376071:-1
position: 1376071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376262:-1
position: 1376262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1371269-1371337:-1:exon

position:1371269:-1
position: 1371269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371337:-1
position: 1371337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1366105-1366159:-1:exon

position:1366105:-1
position: 1366105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366159:-1
position: 1366159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1365146-1365360:-1:exon

position:1365146:-1
position: 1365146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365360:-1
position: 1365360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1352549-1353185:-1:exon

position:1352549:-1
position: 1352549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353185:-1
position: 1353185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1350391-1350536:-1:exon

position:1350391:-1
position: 1350391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350536:-1
position: 1350536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1347031-1347130:-1:exon

position:1347031:-1
position: 1347031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347130:-1
position: 1347130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1326215-1326689:-1:exon

position:1326689:-1
position: 1326689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034788189.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1326215..1326689,1340637..1340723,1347031..1347130,1350391..1350536,1352549..1353185,1365146..1365360,1366105..1366159,1371269..1371337,1376817..1377196))
location: region:1326215-1377196:-1
so has part: feature:1376817-1377196:-1:exon
so has part: feature:1371269-1371337:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365146-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1340637-1340723:-1:exon
so has part: feature:1326215-1326689:-1:exon

position:1377196:-1
position: 1377196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376817-1377196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1371269-1371337:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1366105-1366159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1365146-1365360:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352549-1353185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350391-1350536:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347031-1347130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1340637-1340723:-1:exon

position:1340637:-1
position: 1340637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1340723:-1
position: 1340723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1326215-1326689:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034788183.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1326215..1326689,1340637..1340723,1347031..1347130,1350391..1350536,1352549..1353185,1365146..1365360,1366105..1366159,1371269..1371337,1376071..1376259,1376817..1377196))
location: region:1326215-1377196:-1
so has part: feature:1376817-1377196:-1:exon
so has part: feature:1376071-1376259:-1:exon
so has part: feature:1371269-1371337:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365146-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1340637-1340723:-1:exon
so has part: feature:1326215-1326689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1376817-1377196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1376071-1376259:-1:exon

position:1376259:-1
position: 1376259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1371269-1371337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1366105-1366159:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1365146-1365360:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352549-1353185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1350391-1350536:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1347031-1347130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1340637-1340723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1326215-1326689:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034788182.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1326215..1326689,1340637..1340723,1347031..1347130,1350391..1350536,1352549..1353185,1365146..1365360,1366105..1366159,1371269..1371337,1376071..1376262,1376817..1377195))
location: region:1326215-1377195:-1
so has part: feature:1376817-1377195:-1:exon
so has part: feature:1376071-1376262:-1:exon
so has part: feature:1371269-1371337:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365146-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1340637-1340723:-1:exon
so has part: feature:1326215-1326689:-1:exon

position:1377195:-1
position: 1377195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376817-1377195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1376071-1376262:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1371269-1371337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1366105-1366159:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1365146-1365360:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352549-1353185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1350391-1350536:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1347031-1347130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1340637-1340723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1326215-1326689:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_034788185.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1326215..1326689,1340637..1340723,1347031..1347130,1350391..1350536,1352549..1353185,1365230..1365360,1366105..1366159,1371269..1371337,1376071..1376262,1376817..1377189))
location: region:1326215-1377189:-1
so has part: feature:1376817-1377189:-1:exon
so has part: feature:1376071-1376262:-1:exon
so has part: feature:1371269-1371337:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365230-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1340637-1340723:-1:exon
so has part: feature:1326215-1326689:-1:exon

position:1377189:-1
position: 1377189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376817-1377189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1376071-1376262:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1371269-1371337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1366105-1366159:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1365230-1365360:-1:exon

position:1365230:-1
position: 1365230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1352549-1353185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1350391-1350536:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1347031-1347130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1340637-1340723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1326215-1326689:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034788188.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1326215..1326689,1340637..1340723,1347031..1347130,1350391..1350536,1352549..1353185,1365146..1365360,1366105..1366159,1366447..1366588,1371269..1371337,1376071..1376086))
location: region:1326215-1376086:-1
so has part: feature:1376071-1376086:-1:exon
so has part: feature:1371269-1371337:-1:exon
so has part: feature:1366447-1366588:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365146-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1340637-1340723:-1:exon
so has part: feature:1326215-1326689:-1:exon

position:1376086:-1
position: 1376086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376071-1376086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1371269-1371337:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1366447-1366588:-1:exon

position:1366447:-1
position: 1366447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366588:-1
position: 1366588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1366105-1366159:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1365146-1365360:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352549-1353185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1350391-1350536:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1347031-1347130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1340637-1340723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1326215-1326689:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X3
translation: MWSADEVAGLCYTHYSTKLPKQGKPDPNREWTLLAAVVKVESAPEREACLNVGNLQVTKEVVAMGTGTKCIGHTRMRKTGDILNDSHAEVIAKRSFQRYLVHQLWLAASHQQGSIFSPGTEIGKWKLKPHITFIFFCSHTPCGDASIIPMTKPEDQPCELVSRKDPTRHSADCSGNHDPVGPENKRKTEETASDHVTKRMKTVISDSTCEVTERITAQYVPGNQQNIQDTNISRSEFITDGQREILTCAKETGLIGAKVMDVYRTGAKCVLGERDDARRPGVEYHHVELLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQHPVYFSAVVVGKCPYSQEVMRRAVIERCQHISFLPDGFHVQEVKMLQSNLQFKHSRHAIQTGHANGKAKLVPCGAAISWSAVPEQPLDVTSNGFKQGTTKKGIGSCQTRSRICKVELFHVFQRLVASISQENLPESLREKKLETYWEYKEAAANYQEAWKVLRSQALGAWVKNTKDYLQFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1326557..1326689,1340637..1340723,1347031..1347130,1350391..1350536,1352549..1353185,1365230..1365360,1366105..1366159,1371269..1371337,1376071..1376239))
location: region:1326557-1376239:-1
so has part: feature:1376071-1376239:-1:exon
so has part: feature:1371269-1371337:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365230-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1340637-1340723:-1:exon
so has part: feature:1326557-1326689:-1:exon

XP_034644076.1
type: Protein
SIO_000068: ncbiprotein

position:1326557:-1
position: 1326557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376239:-1
position: 1376239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376071-1376239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1371269-1371337:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1366105-1366159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1365230-1365360:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352549-1353185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350391-1350536:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347031-1347130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1340637-1340723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1326557-1326689:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X4
translation: MWSADEVAGLCYTHYSTKLPKQGKPDPNREWTLLAAVVKVESAPEREACLNVGNLQVTKEVVAMGTGTKCIGHTRMRKTGDILNDSHAEVIAKRSFQRYLVHQLWLAASHQQGSIFSPGTEIGKWKLKPHITFIFFCSHTPCKYIRANPSCSHPCLVHVSQLPQPWLREGGDASIIPMTKPEDQPCELVSRKDPTRHSADCSGNHDPVGPENKRKTEETASDHVTKRMKTVISDSTCEVTERITAQYVPGNQQNIQDTNISRSEFITDGQREILTCAKETGLIGAKVMDVYRTGAKCVLGERDDARRPGVEYHHVELLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQHPVYFSAVVVGKCPYSQEVMRRAVIERCQHISFLPDGFHVQEVKMLQSNLQFKHSRHAIQTGHANGKAKLVPCGAAISWSAVPEQPLDVTSNGFKQGTTKKGIGSCQTREKKLETYWEYKEAAANYQEAWKVLRSQALGAWVKNTKDYLQFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1326557..1326689,1347031..1347130,1350391..1350536,1352549..1353185,1365146..1365360,1366105..1366159,1371269..1371337,1376071..1376239))
location: region:1326557-1376239:-1
so has part: feature:1376071-1376239:-1:exon
so has part: feature:1371269-1371337:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365146-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1326557-1326689:-1:exon

XP_034644077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1376071-1376239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1371269-1371337:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1366105-1366159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1365146-1365360:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352549-1353185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350391-1350536:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347031-1347130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1326557-1326689:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X1
translation: MWSADEVAGLCYTHYSTKLPKQGKPDPNREWTLLAAVVKVESAPEREACLNVGNLQVTKEVVAMGTGTKCIGHTRMRKTGDILNDSHAEVIAKRSFQRYLVHQLWLAASHQQGSIFSPGTEIGKWKLKPHITFIFFCSHTPCKYIRANPSCSHPCLVHVSQLPQPWLREGGDASIIPMTKPEDQPCELVSRKDPTRHSADCSGNHDPVGPENKRKTEETASDHVTKRMKTVISDSTCEVTERITAQYVPGNQQNIQDTNISRSEFITDGQREILTCAKETGLIGAKVMDVYRTGAKCVLGERDDARRPGVEYHHVELLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQHPVYFSAVVVGKCPYSQEVMRRAVIERCQHISFLPDGFHVQEVKMLQSNLQFKHSRHAIQTGHANGKAKLVPCGAAISWSAVPEQPLDVTSNGFKQGTTKKGIGSCQTRSRICKVELFHVFQRLVASISQENLPESLREKKLETYWEYKEAAANYQEAWKVLRSQALGAWVKNTKDYLQFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1326557..1326689,1340637..1340723,1347031..1347130,1350391..1350536,1352549..1353185,1365146..1365360,1366105..1366159,1371269..1371337,1376071..1376239))
location: region:1326557-1376239:-1
so has part: feature:1376071-1376239:-1:exon
so has part: feature:1371269-1371337:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365146-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1340637-1340723:-1:exon
so has part: feature:1326557-1326689:-1:exon

XP_034644073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1376071-1376239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1371269-1371337:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1366105-1366159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1365146-1365360:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352549-1353185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350391-1350536:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347031-1347130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1340637-1340723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1326557-1326689:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X1
translation: MWSADEVAGLCYTHYSTKLPKQGKPDPNREWTLLAAVVKVESAPEREACLNVGNLQVTKEVVAMGTGTKCIGHTRMRKTGDILNDSHAEVIAKRSFQRYLVHQLWLAASHQQGSIFSPGTEIGKWKLKPHITFIFFCSHTPCKYIRANPSCSHPCLVHVSQLPQPWLREGGDASIIPMTKPEDQPCELVSRKDPTRHSADCSGNHDPVGPENKRKTEETASDHVTKRMKTVISDSTCEVTERITAQYVPGNQQNIQDTNISRSEFITDGQREILTCAKETGLIGAKVMDVYRTGAKCVLGERDDARRPGVEYHHVELLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQHPVYFSAVVVGKCPYSQEVMRRAVIERCQHISFLPDGFHVQEVKMLQSNLQFKHSRHAIQTGHANGKAKLVPCGAAISWSAVPEQPLDVTSNGFKQGTTKKGIGSCQTRSRICKVELFHVFQRLVASISQENLPESLREKKLETYWEYKEAAANYQEAWKVLRSQALGAWVKNTKDYLQFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1326557..1326689,1340637..1340723,1347031..1347130,1350391..1350536,1352549..1353185,1365146..1365360,1366105..1366159,1371269..1371337,1376071..1376239))
location: region:1326557-1376239:-1
so has part: feature:1376071-1376239:-1:exon
so has part: feature:1371269-1371337:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365146-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1340637-1340723:-1:exon
so has part: feature:1326557-1326689:-1:exon

XP_034644074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1376071-1376239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1371269-1371337:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1366105-1366159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1365146-1365360:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352549-1353185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350391-1350536:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347031-1347130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1340637-1340723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1326557-1326689:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X7
translation: MGTGTKCIGHTRMRKTGDILNDSHAEVIAKRSFQRYLVHQLWLAASHQQGSIFSPGTEIGKWKLKPHITFIFFCSHTPCKYIRANPSCSHPCLVHVSQLPQPWLREGGDASIIPMTKPEDQPCELVSRKDPTRHSADCSGNHDPVGPENKRKTEETASDHVTKRMKTVISDSTCEVTERITAQYVPGNQQNIQDTNISRSEFITDGQREILTCAKETGLIGAKVMDVYRTGAKCVLGERDDARRPGVEYHHVELLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQHPVYFSAVVVGKCPYSQEVMRRAVIERCQHISFLPDGFHVQEVKMLQSNLQFKHSRHAIQTGHANGKAKLVPCGAAISWSAVPEQPLDVTSNGFKQGTTKKGIGSCQTRSRICKVELFHVFQRLVASISQENLPESLREKKLETYWEYKEAAANYQEAWKVLRSQALGAWVKNTKDYLQFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1326557..1326689,1340637..1340723,1347031..1347130,1350391..1350536,1352549..1353185,1365146..1365360,1366105..1366159,1371269..1371317))
location: region:1326557-1371317:-1
so has part: feature:1371269-1371317:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365146-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1340637-1340723:-1:exon
so has part: feature:1326557-1326689:-1:exon

XP_034644080.1
type: Protein
SIO_000068: ncbiprotein

position:1371317:-1
position: 1371317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1371269-1371317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1366105-1366159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365146-1365360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352549-1353185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1350391-1350536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1347031-1347130:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1340637-1340723:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1326557-1326689:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X6
translation: MLWNEIITGLPFKYCPSPAFLVGSDWIIAQRGDILNDSHAEVIAKRSFQRYLVHQLWLAASHQQGSIFSPGTEIGKWKLKPHITFIFFCSHTPCKYIRANPSCSHPCLVHVSQLPQPWLREGGDASIIPMTKPEDQPCELVSRKDPTRHSADCSGNHDPVGPENKRKTEETASDHVTKRMKTVISDSTCEVTERITAQYVPGNQQNIQDTNISRSEFITDGQREILTCAKETGLIGAKVMDVYRTGAKCVLGERDDARRPGVEYHHVELLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQHPVYFSAVVVGKCPYSQEVMRRAVIERCQHISFLPDGFHVQEVKMLQSNLQFKHSRHAIQTGHANGKAKLVPCGAAISWSAVPEQPLDVTSNGFKQGTTKKGIGSCQTRSRICKVELFHVFQRLVASISQENLPESLREKKLETYWEYKEAAANYQEAWKVLRSQALGAWVKNTKDYLQFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1326557..1326689,1340637..1340723,1347031..1347130,1350391..1350536,1352549..1353185,1365146..1365360,1366105..1366159,1366447..1366540))
location: region:1326557-1366540:-1
so has part: feature:1366447-1366540:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365146-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1340637-1340723:-1:exon
so has part: feature:1326557-1326689:-1:exon

XP_034644079.1
type: Protein
SIO_000068: ncbiprotein

position:1366540:-1
position: 1366540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366447-1366540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1366105-1366159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365146-1365360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352549-1353185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1350391-1350536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1347031-1347130:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1340637-1340723:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1326557-1326689:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034788184.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1327409..1327594,1340637..1340723,1347031..1347130,1350391..1350536,1352549..1353185,1365146..1365360,1366105..1366159,1371269..1371337,1376071..1376262,1376817..1377199))
location: region:1327409-1377199:-1
so has part: feature:1376817-1377199:-1:exon
so has part: feature:1376071-1376262:-1:exon
so has part: feature:1371269-1371337:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365146-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1340637-1340723:-1:exon
so has part: feature:1327409-1327594:-1:exon

position:1327409:-1
position: 1327409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1377199:-1
position: 1377199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376817-1377199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1376071-1376262:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1371269-1371337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1366105-1366159:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1365146-1365360:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352549-1353185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1350391-1350536:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1347031-1347130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1340637-1340723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1327409-1327594:-1:exon

position:1327594:-1
position: 1327594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X2
translation: MWSADEVAGLCYTHYSTKLPKQGKPDPNREWTLLAAVVKVESAPEREACLNVGNLQVTKEVVAMGTGTKCIGHTRMRKTGDILNDSHAEVIAKRSFQRYLVHQLWLAASHQQGSIFSPGTEIGKWKLKPHITFIFFCSHTPCKYIRANPSCSHPCLVHVSQLPQPWLREGGDASIIPMTKPEDQPCELVSRKDPTRHSADCSGNHDPVGPENKRKTEETASDHVTKRMKTVISDSTCEVTERITAQYVPGNQQNIQDTNISRSEFITDGQREILTCAKETGLIGAKVMDVYRTGAKCVLGERDDARRPGVEYHHVELLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQHPVYFSAVVVGKCPYSQEVMRRAVIERCQHISFLPDGFHVQEVKMLQSNLQFKHSRHAIQTGHANGKAKLVPCGAAISWSAVPEQPLDVTSNGFKQGTTKKGIGSCQTRSRICKVELFHVFQRLVASISQENLPESLRFVISSMDEDLKVKSETE
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1327540..1327594,1340637..1340723,1347031..1347130,1350391..1350536,1352549..1353185,1365146..1365360,1366105..1366159,1371269..1371337,1376071..1376239))
location: region:1327540-1376239:-1
so has part: feature:1376071-1376239:-1:exon
so has part: feature:1371269-1371337:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365146-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1340637-1340723:-1:exon
so has part: feature:1327540-1327594:-1:exon

XP_034644075.1
type: Protein
SIO_000068: ncbiprotein

position:1327540:-1
position: 1327540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376071-1376239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1371269-1371337:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1366105-1366159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1365146-1365360:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352549-1353185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350391-1350536:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347031-1347130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1340637-1340723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1327540-1327594:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ADAT1
product: adenosine deaminase tRNA specific 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034788187.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1342735..1343339,1347031..1347130,1350391..1350536,1352549..1353185,1365146..1365360,1366105..1366159,1371269..1371337,1376071..1376262,1376817..1377200))
location: region:1342735-1377200:-1
so has part: feature:1376817-1377200:-1:exon
so has part: feature:1376071-1376262:-1:exon
so has part: feature:1371269-1371337:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365146-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1342735-1343339:-1:exon

position:1342735:-1
position: 1342735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376817-1377200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1376071-1376262:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1371269-1371337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1366105-1366159:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1365146-1365360:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352549-1353185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1350391-1350536:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1347031-1347130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1342735-1343339:-1:exon

position:1343339:-1
position: 1343339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X5
translation: MWSADEVAGLCYTHYSTKLPKQGKPDPNREWTLLAAVVKVESAPEREACLNVGNLQVTKEVVAMGTGTKCIGHTRMRKTGDILNDSHAEVIAKRSFQRYLVHQLWLAASHQQGSIFSPGTEIGKWKLKPHITFIFFCSHTPCKYIRANPSCSHPCLVHVSQLPQPWLREGGDASIIPMTKPEDQPCELVSRKDPTRHSADCSGNHDPVGPENKRKTEETASDHVTKRMKTVISDSTCEVTERITAQYVPGNQQNIQDTNISRSEFITDGQREILTCAKETGLIGAKVMDVYRTGAKCVLGERDDARRPGVEYHHVELLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQHPVYFSAVVVGKCPYSQEVMRRAVIERCQHISFLPDGFHVQEVKMLQSNLQFKHSRHAIQTGHANGKAKLVPCGAAISWSAVPEQPLDVTSNGFKQGTTKKGIGSCQTSERNQPETLAHGSRTRNLLDLWILRSFCNFHWTLPALC
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(1343225..1343339,1347031..1347130,1350391..1350536,1352549..1353185,1365146..1365360,1366105..1366159,1371269..1371337,1376071..1376239))
location: region:1343225-1376239:-1
so has part: feature:1376071-1376239:-1:exon
so has part: feature:1371269-1371337:-1:exon
so has part: feature:1366105-1366159:-1:exon
so has part: feature:1365146-1365360:-1:exon
so has part: feature:1352549-1353185:-1:exon
so has part: feature:1350391-1350536:-1:exon
so has part: feature:1347031-1347130:-1:exon
so has part: feature:1343225-1343339:-1:exon

XP_034644078.1
type: Protein
SIO_000068: ncbiprotein

position:1343225:-1
position: 1343225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376071-1376239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1371269-1371337:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1366105-1366159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1365146-1365360:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352549-1353185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350391-1350536:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347031-1347130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1343225-1343339:-1:exon

KARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1381059..1402399)
location: region:1381059-1402399:-1
so has part: feature:1381059-1402399:-1:exon
subclass of: SO_0000010

117886446
type: Gene
SIO_000068: ncbigene

position:1381059:-1
position: 1381059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402399:-1
position: 1402399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1381059-1402399:-1:exon

KARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: KARS1
product: lysyl-tRNA synthetase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_034788245.1
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(1381059..1381306,1381883..1382026,1383295..1383421,1384899..1384984,1389696..1389781,1393331..1393504,1393604..1393766,1394140..1394259,1396775..1396900,1397054..1397240,1397731..1397824,1398238..1398403,1400652..1400802,1402260..1402399))
location: region:1381059-1402399:-1
so has part: feature:1402260-1402399:-1:exon
so has part: feature:1400652-1400802:-1:exon
so has part: feature:1398238-1398403:-1:exon
so has part: feature:1397731-1397824:-1:exon
so has part: feature:1397054-1397240:-1:exon
so has part: feature:1396775-1396900:-1:exon
so has part: feature:1394140-1394259:-1:exon
so has part: feature:1393604-1393766:-1:exon
so has part: feature:1393331-1393504:-1:exon
so has part: feature:1389696-1389781:-1:exon
so has part: feature:1384899-1384984:-1:exon
so has part: feature:1383295-1383421:-1:exon
so has part: feature:1381883-1382026:-1:exon
so has part: feature:1381059-1381306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1402260-1402399:-1:exon

position:1402260:-1
position: 1402260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1400652-1400802:-1:exon

position:1400652:-1
position: 1400652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1400802:-1
position: 1400802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1398238-1398403:-1:exon

position:1398238:-1
position: 1398238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398403:-1
position: 1398403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1397731-1397824:-1:exon

position:1397731:-1
position: 1397731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397824:-1
position: 1397824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1397054-1397240:-1:exon

position:1397054:-1
position: 1397054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397240:-1
position: 1397240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1396775-1396900:-1:exon

position:1396775:-1
position: 1396775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1396900:-1
position: 1396900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1394140-1394259:-1:exon

position:1394140:-1
position: 1394140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394259:-1
position: 1394259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1393604-1393766:-1:exon

position:1393604:-1
position: 1393604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393766:-1
position: 1393766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1393331-1393504:-1:exon

position:1393331:-1
position: 1393331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393504:-1
position: 1393504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1389696-1389781:-1:exon

position:1389696:-1
position: 1389696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389781:-1
position: 1389781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1384899-1384984:-1:exon

position:1384899:-1
position: 1384899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384984:-1
position: 1384984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1383295-1383421:-1:exon

position:1383295:-1
position: 1383295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383421:-1
position: 1383421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1381883-1382026:-1:exon

position:1381883:-1
position: 1381883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382026:-1
position: 1382026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1381059-1381306:-1:exon

position:1381306:-1
position: 1381306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: KARS1
product: lysyl-tRNA synthetase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_034788243.1
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(1381059..1381306,1381883..1382026,1383295..1383421,1384899..1384984,1389696..1389781,1393331..1393504,1393604..1393766,1394140..1394259,1396775..1396900,1397054..1397240,1397731..1397824,1398238..1398403,1400652..1400802,1401993..1402151,1402260..1402382))
location: region:1381059-1402382:-1
so has part: feature:1402260-1402382:-1:exon
so has part: feature:1401993-1402151:-1:exon
so has part: feature:1400652-1400802:-1:exon
so has part: feature:1398238-1398403:-1:exon
so has part: feature:1397731-1397824:-1:exon
so has part: feature:1397054-1397240:-1:exon
so has part: feature:1396775-1396900:-1:exon
so has part: feature:1394140-1394259:-1:exon
so has part: feature:1393604-1393766:-1:exon
so has part: feature:1393331-1393504:-1:exon
so has part: feature:1389696-1389781:-1:exon
so has part: feature:1384899-1384984:-1:exon
so has part: feature:1383295-1383421:-1:exon
so has part: feature:1381883-1382026:-1:exon
so has part: feature:1381059-1381306:-1:exon

position:1402382:-1
position: 1402382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1402260-1402382:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1401993-1402151:-1:exon

position:1401993:-1
position: 1401993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402151:-1
position: 1402151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1400652-1400802:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1398238-1398403:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1397731-1397824:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1397054-1397240:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1396775-1396900:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1394140-1394259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393604-1393766:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1393331-1393504:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1389696-1389781:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1384899-1384984:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1383295-1383421:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1381883-1382026:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1381059-1381306:-1:exon

KARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X3
translation: MAAAAGAAPASDVVEAEAPLSKNELKRRLKAERKVADKEAKQKEQSEKHLSKSALTLGSENCNGADEESLDPNQYYKIRSQAIQQLKGTNEDPYPHKFHVSLSLTDFIEKYSHLQAGDHLRDITVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEYIHINNKLRRGDIIGVQGSPGKTKKGELSIIPCEISLLSPCLHMLPHLHFGLKDKETRFRQRYLDLILNDYVRQKFIIRAKIITYLRSFLDELGFLEIETPMMNIIPGGAVAKPFITHHNELDMKLYMRIAPELYHKMLVVGGMDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKVTYHPDGPDGHACEIDFTPPFRKISMVCELERILGVKLPATDHFETEETRKFFDAICVERGVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSQQGLTERFELFVMKKEICNAYTELNDPFRQRQFFEDQAKAKAAGDDEAMFIDDNFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDNKKEVEPSPSAEGTSV
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(1381220..1381306,1381883..1382026,1383295..1383421,1384899..1384984,1389696..1389781,1393331..1393504,1393604..1393766,1394140..1394259,1396775..1396900,1397054..1397240,1397731..1397824,1398238..1398403,1400652..1400802,1402260..1402327))
location: region:1381220-1402327:-1
so has part: feature:1402260-1402327:-1:exon
so has part: feature:1400652-1400802:-1:exon
so has part: feature:1398238-1398403:-1:exon
so has part: feature:1397731-1397824:-1:exon
so has part: feature:1397054-1397240:-1:exon
so has part: feature:1396775-1396900:-1:exon
so has part: feature:1394140-1394259:-1:exon
so has part: feature:1393604-1393766:-1:exon
so has part: feature:1393331-1393504:-1:exon
so has part: feature:1389696-1389781:-1:exon
so has part: feature:1384899-1384984:-1:exon
so has part: feature:1383295-1383421:-1:exon
so has part: feature:1381883-1382026:-1:exon
so has part: feature:1381220-1381306:-1:exon

XP_034644136.1
type: Protein
SIO_000068: ncbiprotein

position:1381220:-1
position: 1381220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402327:-1
position: 1402327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1402260-1402327:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1400652-1400802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1398238-1398403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1397731-1397824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1397054-1397240:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1396775-1396900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1394140-1394259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1393604-1393766:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393331-1393504:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1389696-1389781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1384899-1384984:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1383295-1383421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381883-1382026:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1381220-1381306:-1:exon

KARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X1
translation: MLNPAVARLLRGRFGWAWRARPPRAACPALRRLQALHDQRSELKRRLKAERKVADKEAKQKEQSEKHLSKSALTLGSENCNGADEESLDPNQYYKIRSQAIQQLKGTNEDPYPHKFHVSLSLTDFIEKYSHLQAGDHLRDITVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEYIHINNKLRRGDIIGVQGSPGKTKKGELSIIPCEISLLSPCLHMLPHLHFGLKDKETRFRQRYLDLILNDYVRQKFIIRAKIITYLRSFLDELGFLEIETPMMNIIPGGAVAKPFITHHNELDMKLYMRIAPELYHKMLVVGGMDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKVTYHPDGPDGHACEIDFTPPFRKISMVCELERILGVKLPATDHFETEETRKFFDAICVERGVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSQQGLTERFELFVMKKEICNAYTELNDPFRQRQFFEDQAKAKAAGDDEAMFIDDNFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDNKKEVEPSPSAEGTSV
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(1381220..1381306,1381883..1382026,1383295..1383421,1384899..1384984,1389696..1389781,1393331..1393504,1393604..1393766,1394140..1394259,1396775..1396900,1397054..1397240,1397731..1397824,1398238..1398403,1400652..1400802,1401993..1402114))
location: region:1381220-1402114:-1
so has part: feature:1401993-1402114:-1:exon
so has part: feature:1400652-1400802:-1:exon
so has part: feature:1398238-1398403:-1:exon
so has part: feature:1397731-1397824:-1:exon
so has part: feature:1397054-1397240:-1:exon
so has part: feature:1396775-1396900:-1:exon
so has part: feature:1394140-1394259:-1:exon
so has part: feature:1393604-1393766:-1:exon
so has part: feature:1393331-1393504:-1:exon
so has part: feature:1389696-1389781:-1:exon
so has part: feature:1384899-1384984:-1:exon
so has part: feature:1383295-1383421:-1:exon
so has part: feature:1381883-1382026:-1:exon
so has part: feature:1381220-1381306:-1:exon

XP_034644134.1
type: Protein
SIO_000068: ncbiprotein

position:1402114:-1
position: 1402114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1401993-1402114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1400652-1400802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1398238-1398403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1397731-1397824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1397054-1397240:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1396775-1396900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1394140-1394259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1393604-1393766:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393331-1393504:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1389696-1389781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1384899-1384984:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1383295-1383421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381883-1382026:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1381220-1381306:-1:exon

KARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: KARS1
product: lysyl-tRNA synthetase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_034788244.1
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(1381591..1381759,1381865..1382026,1383295..1383421,1384899..1384984,1389696..1389781,1393331..1393504,1393604..1393766,1394140..1394259,1396775..1396900,1397054..1397240,1397731..1397824,1398238..1398403,1400652..1400802,1401993..1402151,1402260..1402382))
location: region:1381591-1402382:-1
so has part: feature:1402260-1402382:-1:exon
so has part: feature:1401993-1402151:-1:exon
so has part: feature:1400652-1400802:-1:exon
so has part: feature:1398238-1398403:-1:exon
so has part: feature:1397731-1397824:-1:exon
so has part: feature:1397054-1397240:-1:exon
so has part: feature:1396775-1396900:-1:exon
so has part: feature:1394140-1394259:-1:exon
so has part: feature:1393604-1393766:-1:exon
so has part: feature:1393331-1393504:-1:exon
so has part: feature:1389696-1389781:-1:exon
so has part: feature:1384899-1384984:-1:exon
so has part: feature:1383295-1383421:-1:exon
so has part: feature:1381865-1382026:-1:exon
so has part: feature:1381591-1381759:-1:exon

position:1381591:-1
position: 1381591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1402260-1402382:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1401993-1402151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1400652-1400802:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1398238-1398403:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1397731-1397824:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1397054-1397240:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1396775-1396900:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1394140-1394259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393604-1393766:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1393331-1393504:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1389696-1389781:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1384899-1384984:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1383295-1383421:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1381865-1382026:-1:exon

position:1381865:-1
position: 1381865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1381591-1381759:-1:exon

position:1381759:-1
position: 1381759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: KARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X2
translation: MLNPAVARLLRGRFGWAWRARPPRAACPALRRLQALHDQRSELKRRLKAERKVADKEAKQKEQSEKHLSKSALTLGSENCNGADEESLDPNQYYKIRSQAIQQLKGTNEDPYPHKFHVSLSLTDFIEKYSHLQAGDHLRDITVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEYIHINNKLRRGDIIGVQGSPGKTKKGELSIIPCEISLLSPCLHMLPHLHFGLKDKETRFRQRYLDLILNDYVRQKFIIRAKIITYLRSFLDELGFLEIETPMMNIIPGGAVAKPFITHHNELDMKLYMRIAPELYHKMLVVGGMDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKVTYHPDGPDGHACEIDFTPPFRKISMVCELERILGVKLPATDHFETEETRKFFDAICVERGVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSQQGLTERFELFVMKKEICNAYTELNDPFRQRQFFEDQAKAKAAGDDEAMFIDDNFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKVMDHLEEIGCKKSCKVLSSCKT
SIO_010081: KARS1
subclass of: SO_0000673
so part of: KARS1
location: complement(join(1381709..1381759,1381865..1382026,1383295..1383421,1384899..1384984,1389696..1389781,1393331..1393504,1393604..1393766,1394140..1394259,1396775..1396900,1397054..1397240,1397731..1397824,1398238..1398403,1400652..1400802,1401993..1402114))
location: region:1381709-1402114:-1
so has part: feature:1401993-1402114:-1:exon
so has part: feature:1400652-1400802:-1:exon
so has part: feature:1398238-1398403:-1:exon
so has part: feature:1397731-1397824:-1:exon
so has part: feature:1397054-1397240:-1:exon
so has part: feature:1396775-1396900:-1:exon
so has part: feature:1394140-1394259:-1:exon
so has part: feature:1393604-1393766:-1:exon
so has part: feature:1393331-1393504:-1:exon
so has part: feature:1389696-1389781:-1:exon
so has part: feature:1384899-1384984:-1:exon
so has part: feature:1383295-1383421:-1:exon
so has part: feature:1381865-1382026:-1:exon
so has part: feature:1381709-1381759:-1:exon

XP_034644135.1
type: Protein
SIO_000068: ncbiprotein

position:1381709:-1
position: 1381709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1401993-1402114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1400652-1400802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1398238-1398403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1397731-1397824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1397054-1397240:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1396775-1396900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1394140-1394259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1393604-1393766:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393331-1393504:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1389696-1389781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1384899-1384984:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1383295-1383421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381865-1382026:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1381709-1381759:-1:exon

TERF2IP
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: TERF2IP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1402437..1409358
location: region:1402437-1409358:1
so has part: feature:1402437-1409358:1:exon
subclass of: SO_0000010

117886447
type: Gene
SIO_000068: ncbigene

position:1402437:1
position: 1402437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1409358:1
position: 1409358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1402437-1409358:1:exon

TERF2IP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TERF2IP
product: TERF2 interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_034788247.1
SIO_010081: TERF2IP
subclass of: SO_0000673
so part of: TERF2IP
location: join(1402437..1403087,1404817..1404926,1406765..1409358)
location: region:1402437-1409358:1
so has part: feature:1402437-1403087:1:exon
so has part: feature:1404817-1404926:1:exon
so has part: feature:1406765-1409358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1402437-1403087:1:exon

position:1403087:1
position: 1403087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1404817-1404926:1:exon

position:1404817:1
position: 1404817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1404926:1
position: 1404926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1406765-1409358:1:exon

position:1406765:1
position: 1406765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TERF2IP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TERF2IP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2-interacting protein 1
translation: MGSERAGPARSRTLFLQDDGSAMRFYVRPGPAKLQLAPLILAGGGRLCRVQEPGAVLLAQPDERGATGNFVSTEYVRRCVERNERLPLEHYRLAAEQAPVPAGAPAGRSAFTGSEDEAILLHVRDRAQGSVTGTALWKEMERARLTPHSWQAMRDRYLRHLRGQEHKYLLGGPGSAPPRSLARSARQPADSESWRKEVADVPQGMVQDQLTKGGSLFQLANKEFEGSESENETSDLQEENPAKDEELKSPEKVSSQKMELKELVTAEDSAINETEPQEEEKPIRSCPSPTEVADAVKTVQHFMEEFSMDLSTVTQAFLKNSGEVEATSYFLHSSQRLDGYPIWTRQDDLDLQEADENVRSKLIEKFGAQNVVKRVAFRKS
SIO_010081: TERF2IP
subclass of: SO_0000673
so part of: TERF2IP
location: join(1402514..1403087,1404817..1404926,1406765..1407223)
location: region:1402514-1407223:1
so has part: feature:1402514-1403087:1:exon
so has part: feature:1404817-1404926:1:exon
so has part: feature:1406765-1407223:1:exon

XP_034644138.1
type: Protein
SIO_000068: ncbiprotein

position:1402514:1
position: 1402514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1407223:1
position: 1407223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1402514-1403087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1404817-1404926:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1406765-1407223:1:exon

CHST4
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: CHST4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1428982..1430607)
location: region:1428982-1430607:-1
so has part: feature:1428982-1430607:-1:exon
subclass of: SO_0000010

117886586
type: Gene
SIO_000068: ncbigene

position:1428982:-1
position: 1428982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430607:-1
position: 1430607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1428982-1430607:-1:exon

CHST4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: CHST4
product: carbohydrate sulfotransferase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034788550.1
SIO_010081: CHST4
subclass of: SO_0000673
so part of: CHST4
location: complement(1428982..1430607)
location: region:1428982-1430607:-1
so has part: feature:1428982-1430607:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1428982-1430607:-1:exon

CHST4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: CHST4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 4
translation: MLKSNKTIVKVVLAVQSIVFICFLSHLRSSYSPQEEKPAQVHILILSSWRSGSSFTGQLFSQHPDVFYLMEPAWHVWKAMYQNRAKALQMAARDLIRSVFLCDMSVFDAYMSTQRNKSDLFQWEASRALCSPPACDHFQRNHIISKTACKTLCSRYPFSKVEEACKTYSHIILKEVRFFDLTVLYPLLTDPSLNLKIIHLVRDPRAVFHSREKTVAALMHDSNIVVGPQKNQGERGPYNVMQEICKSHIRIYTEGSQALPSFLKGRYMLVRYEDIVNDPLAKAAQMYKFAELHLIPKLQVWLYNITHGKGLGMQAFDIGSRDAVNVSQAWRKNLSFQKIAKLQNVCKDAMDLLGYRLVMSEEEQKDMALNLLFTQGLPPSDTGS
SIO_010081: CHST4
subclass of: SO_0000673
so part of: CHST4
location: complement(1429443..1430597)
location: region:1429443-1430597:-1
so has part: feature:1429443-1430597:-1:exon

XP_034644441.1
type: Protein
SIO_000068: ncbiprotein

position:1429443:-1
position: 1429443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430597:-1
position: 1430597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429443-1430597:-1:exon

TAT
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1502234..1517498)
location: region:1502234-1517498:-1
so has part: feature:1502234-1517498:-1:exon
subclass of: SO_0000010

117886654
type: Gene
SIO_000068: ncbigene

position:1502234:-1
position: 1502234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1517498:-1
position: 1517498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1502234-1517498:-1:exon

TAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TAT
product: tyrosine aminotransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_034788654.1
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(1502234..1503089,1503867..1503965,1508822..1508905,1509430..1509558,1511075..1511227,1511814..1511866,1512520..1512658,1513153..1513311,1513732..1513799,1514803..1514907,1515121..1515284,1517363..1517498))
location: region:1502234-1517498:-1
so has part: feature:1517363-1517498:-1:exon
so has part: feature:1515121-1515284:-1:exon
so has part: feature:1514803-1514907:-1:exon
so has part: feature:1513732-1513799:-1:exon
so has part: feature:1513153-1513311:-1:exon
so has part: feature:1512520-1512658:-1:exon
so has part: feature:1511814-1511866:-1:exon
so has part: feature:1511075-1511227:-1:exon
so has part: feature:1509430-1509558:-1:exon
so has part: feature:1508822-1508905:-1:exon
so has part: feature:1503867-1503965:-1:exon
so has part: feature:1502234-1503089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1517363-1517498:-1:exon

position:1517363:-1
position: 1517363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1515121-1515284:-1:exon

position:1515121:-1
position: 1515121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1515284:-1
position: 1515284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1514803-1514907:-1:exon

position:1514803:-1
position: 1514803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514907:-1
position: 1514907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1513732-1513799:-1:exon

position:1513732:-1
position: 1513732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513799:-1
position: 1513799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1513153-1513311:-1:exon

position:1513153:-1
position: 1513153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513311:-1
position: 1513311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1512520-1512658:-1:exon

position:1512520:-1
position: 1512520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1512658:-1
position: 1512658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1511814-1511866:-1:exon

position:1511814:-1
position: 1511814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511866:-1
position: 1511866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1511075-1511227:-1:exon

position:1511075:-1
position: 1511075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511227:-1
position: 1511227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1509430-1509558:-1:exon

position:1509430:-1
position: 1509430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1509558:-1
position: 1509558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1508822-1508905:-1:exon

position:1508822:-1
position: 1508822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1508905:-1
position: 1508905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1503867-1503965:-1:exon

position:1503867:-1
position: 1503867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1503965:-1
position: 1503965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1502234-1503089:-1:exon

position:1503089:-1
position: 1503089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: TAT
product: tyrosine aminotransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_034788653.1
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(1502234..1503089,1503867..1503965,1508822..1508905,1509430..1509558,1511075..1511227,1511814..1511866,1512520..1512658,1513153..1513311,1513732..1513799,1514803..1514907,1515121..1515345,1517363..1517498))
location: region:1502234-1517498:-1
so has part: feature:1517363-1517498:-1:exon
so has part: feature:1515121-1515345:-1:exon
so has part: feature:1514803-1514907:-1:exon
so has part: feature:1513732-1513799:-1:exon
so has part: feature:1513153-1513311:-1:exon
so has part: feature:1512520-1512658:-1:exon
so has part: feature:1511814-1511866:-1:exon
so has part: feature:1511075-1511227:-1:exon
so has part: feature:1509430-1509558:-1:exon
so has part: feature:1508822-1508905:-1:exon
so has part: feature:1503867-1503965:-1:exon
so has part: feature:1502234-1503089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1517363-1517498:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1515121-1515345:-1:exon

position:1515345:-1
position: 1515345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1514803-1514907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1513732-1513799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1513153-1513311:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1512520-1512658:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1511814-1511866:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1511075-1511227:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1509430-1509558:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1508822-1508905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1503867-1503965:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1502234-1503089:-1:exon

TAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine aminotransferase isoform X1
translation: MDSYLIQVNGNSDVHVHRNGNSLSLGKVKSRKPRWAVRASEMSKKTFNPIRAIVDTMKVEPNPNKPMISLSLGDPTVFGNLPTDDEVIQAVKEALDSGNYNGYAPSVGYQSCRQVVAAYYSCPEAPLEAQDVILTSGCSQAIELALAVLANPGQNILVPRPGFSLYKTLALSMGIEVKFYNLLPEKSWEIDLKHLESLVDAKTACLIVNNPSNPCGSVFSKSHLQKILAVASRQCVPILADEIYGDMVFAECKYEPIATLSTNVPILSCGGLAKRWLVPGWRMGWILVNDRRDIFGNEIRDGLVSLSQRILGPCTIVQGALEHIIHRTPPEFYHNTLSFLKSNADLCYAALSAVSGLQPVRPSGAMYLMVGIEMEHFPKFENDVEFTKQLISEQSVFCLPASCFEYPNFFRVVLTVPEEMMVEACSRIQEFCERHYQGNEGAQDLECDK
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(1502946..1503089,1503867..1503965,1508822..1508905,1509430..1509558,1511075..1511227,1511814..1511866,1512520..1512658,1513153..1513311,1513732..1513799,1514803..1514907,1515121..1515337))
location: region:1502946-1515337:-1
so has part: feature:1515121-1515337:-1:exon
so has part: feature:1514803-1514907:-1:exon
so has part: feature:1513732-1513799:-1:exon
so has part: feature:1513153-1513311:-1:exon
so has part: feature:1512520-1512658:-1:exon
so has part: feature:1511814-1511866:-1:exon
so has part: feature:1511075-1511227:-1:exon
so has part: feature:1509430-1509558:-1:exon
so has part: feature:1508822-1508905:-1:exon
so has part: feature:1503867-1503965:-1:exon
so has part: feature:1502946-1503089:-1:exon

XP_034644544.1
type: Protein
SIO_000068: ncbiprotein

position:1502946:-1
position: 1502946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1515337:-1
position: 1515337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1515121-1515337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1514803-1514907:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1513732-1513799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1513153-1513311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1512520-1512658:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1511814-1511866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1511075-1511227:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1509430-1509558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1508822-1508905:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1503867-1503965:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1502946-1503089:-1:exon

TAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine aminotransferase isoform X2
translation: MSKKTFNPIRAIVDTMKVEPNPNKPMISLSLGDPTVFGNLPTDDEVIQAVKEALDSGNYNGYAPSVGYQSCRQVVAAYYSCPEAPLEAQDVILTSGCSQAIELALAVLANPGQNILVPRPGFSLYKTLALSMGIEVKFYNLLPEKSWEIDLKHLESLVDAKTACLIVNNPSNPCGSVFSKSHLQKILAVASRQCVPILADEIYGDMVFAECKYEPIATLSTNVPILSCGGLAKRWLVPGWRMGWILVNDRRDIFGNEIRDGLVSLSQRILGPCTIVQGALEHIIHRTPPEFYHNTLSFLKSNADLCYAALSAVSGLQPVRPSGAMYLMVGIEMEHFPKFENDVEFTKQLISEQSVFCLPASCFEYPNFFRVVLTVPEEMMVEACSRIQEFCERHYQGNEGAQDLECDK
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(1502946..1503089,1503867..1503965,1508822..1508905,1509430..1509558,1511075..1511227,1511814..1511866,1512520..1512658,1513153..1513311,1513732..1513799,1514803..1514907,1515121..1515214))
location: region:1502946-1515214:-1
so has part: feature:1515121-1515214:-1:exon
so has part: feature:1514803-1514907:-1:exon
so has part: feature:1513732-1513799:-1:exon
so has part: feature:1513153-1513311:-1:exon
so has part: feature:1512520-1512658:-1:exon
so has part: feature:1511814-1511866:-1:exon
so has part: feature:1511075-1511227:-1:exon
so has part: feature:1509430-1509558:-1:exon
so has part: feature:1508822-1508905:-1:exon
so has part: feature:1503867-1503965:-1:exon
so has part: feature:1502946-1503089:-1:exon

XP_034644545.1
type: Protein
SIO_000068: ncbiprotein

position:1515214:-1
position: 1515214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1515121-1515214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1514803-1514907:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1513732-1513799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1513153-1513311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1512520-1512658:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1511814-1511866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1511075-1511227:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1509430-1509558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1508822-1508905:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1503867-1503965:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1502946-1503089:-1:exon

MARVELD3
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: MARVELD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1526175..1533370
location: region:1526175-1533370:1
so has part: feature:1526175-1533370:1:exon
subclass of: SO_0000010

117886734
type: Gene
SIO_000068: ncbigene

position:1526175:1
position: 1526175
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1533370:1
position: 1533370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1526175-1533370:1:exon

MARVELD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: MARVELD3
product: MARVEL domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_034788778.1
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: join(<1526175..1526293,1527151..1527278,1530682..1533370)
location: region:1526175-1533370:1
so has part: feature:1526175-1526293:1:exon
so has part: feature:1527151-1527278:1:exon
so has part: feature:1530682-1533370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1526175-1526293:1:exon

position:1526293:1
position: 1526293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1527151-1527278:1:exon

position:1527151:1
position: 1527151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1527278:1
position: 1527278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1530682-1533370:1:exon

position:1530682:1
position: 1530682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MARVELD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: MARVELD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MARVEL domain-containing protein 3
translation: PRASRFSPGPRWRSASGGGPSSRAGRARRAAPPRGPRPGREEPPPVLPSPIRGPSCERPECYQAEPSGLLECYQCRYLCTARACCQLVEVLLTMLILICSSVSYSSTGGYTGIPSLGGIYYYQYGGAYSGFDGAEGEKAQQLDTQFYQLKLPTARAAMAVGGALMAFSCLLVLVGVLRLPWHFPAWLLLECTLDILIALGFLPALYFYFHHLLDAYDSPVCKEREHLYQSKGYQGFSCSVHGAEIAAGLFSCIAIVAFLVSAGLAIRGYKTVRQLREKPVQMYEF
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: join(<1526175..1526293,1527151..1527278,1530682..1531292)
location: region:1526175-1531292:1
so has part: feature:1526175-1526293:1:exon
so has part: feature:1527151-1527278:1:exon
so has part: feature:1530682-1531292:1:exon

XP_034644669.1
type: Protein
SIO_000068: ncbiprotein

position:1531292:1
position: 1531292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1526175-1526293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1527151-1527278:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1530682-1531292:1:exon

PHLPP2
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1571684..1693721)
location: region:1571684-1693721:-1
so has part: feature:1571684-1693721:-1:exon
subclass of: SO_0000010

117886501
type: Gene
SIO_000068: ncbigene

position:1571684:-1
position: 1571684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693721:-1
position: 1693721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1571684-1693721:-1:exon

PHLPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034788371.1
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(1571684..1572522,1572942..1573136,1574029..1574139,1575177..1575307,1577616..1577778,1580240..1580428,1581300..1581455,1588456..1588551,1593683..1593743,1596941..1597143,1598009..1598239,1606635..1606781,1617285..1617439,1621125..1621250,1622062..1622252,1645223..1645356,1666706..1666953,1693608..1693721))
location: region:1571684-1693721:-1
so has part: feature:1693608-1693721:-1:exon
so has part: feature:1666706-1666953:-1:exon
so has part: feature:1645223-1645356:-1:exon
so has part: feature:1622062-1622252:-1:exon
so has part: feature:1621125-1621250:-1:exon
so has part: feature:1617285-1617439:-1:exon
so has part: feature:1606635-1606781:-1:exon
so has part: feature:1598009-1598239:-1:exon
so has part: feature:1596941-1597143:-1:exon
so has part: feature:1593683-1593743:-1:exon
so has part: feature:1588456-1588551:-1:exon
so has part: feature:1581300-1581455:-1:exon
so has part: feature:1580240-1580428:-1:exon
so has part: feature:1577616-1577778:-1:exon
so has part: feature:1575177-1575307:-1:exon
so has part: feature:1574029-1574139:-1:exon
so has part: feature:1572942-1573136:-1:exon
so has part: feature:1571684-1572522:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1693608-1693721:-1:exon

position:1693608:-1
position: 1693608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1666706-1666953:-1:exon

position:1666706:-1
position: 1666706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1666953:-1
position: 1666953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1645223-1645356:-1:exon

position:1645223:-1
position: 1645223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1645356:-1
position: 1645356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1622062-1622252:-1:exon

position:1622062:-1
position: 1622062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1622252:-1
position: 1622252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1621125-1621250:-1:exon

position:1621125:-1
position: 1621125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1621250:-1
position: 1621250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1617285-1617439:-1:exon

position:1617285:-1
position: 1617285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1617439:-1
position: 1617439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1606635-1606781:-1:exon

position:1606635:-1
position: 1606635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1606781:-1
position: 1606781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1598009-1598239:-1:exon

position:1598009:-1
position: 1598009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1598239:-1
position: 1598239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1596941-1597143:-1:exon

position:1596941:-1
position: 1596941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1597143:-1
position: 1597143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1593683-1593743:-1:exon

position:1593683:-1
position: 1593683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593743:-1
position: 1593743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1588456-1588551:-1:exon

position:1588456:-1
position: 1588456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1588551:-1
position: 1588551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1581300-1581455:-1:exon

position:1581300:-1
position: 1581300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1581455:-1
position: 1581455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1580240-1580428:-1:exon

position:1580240:-1
position: 1580240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1580428:-1
position: 1580428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1577616-1577778:-1:exon

position:1577616:-1
position: 1577616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577778:-1
position: 1577778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1575177-1575307:-1:exon

position:1575177:-1
position: 1575177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575307:-1
position: 1575307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1574029-1574139:-1:exon

position:1574029:-1
position: 1574029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574139:-1
position: 1574139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1572942-1573136:-1:exon

position:1572942:-1
position: 1572942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1573136:-1
position: 1573136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1571684-1572522:-1:exon

position:1572522:-1
position: 1572522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHLPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH domain leucine-rich repeat-containing protein phosphatase 2
translation: MGEAGAEPGPVEAAGAGSARGSRAGSRGGIRVLKRNMKRNGSRNCLNRRSRFGSRERDWLKEDVGRGCVYIYGADSATATSSDLHLVLCTVDTLASEICDGEGRENLYLQLHGDLVRRLEPTEKPLQIVYEYLAGLGFEDLVRIQEEAANSDLSCMIRFYNEKPCQVEQLDRILLSGVYNVRKGKTQLHKWAERLVILCGTCLIVSSVKDCHTGKMHILPLVGGKVEEVKRRQHSLAFSSAGAQAQTYHVCFETLAEYQRWHRQASTVVSQRLSTVDLSCYSLEEVPEHLFYSQDITYLNLRHNFMRLDGSGGLDSLCRFSQLKGLNLSHNRLGELPILLCEISNLTELNISCNGLHHLPNQIGSLFNLQTLCLDGNFLTSLPEELGHLQQLCSLGLSFNNFSEVPVVCEKLTALDKLAMAGNQLETLNLGVLNRMSHIRYVDFRLNHLRRLSVDSLEGNKSVTHMDLRDNQLTDLDLSFLVSLEQLHCERNQLRELTLSGFSLRALYANTNCLMTVNVYPVPTLLTCLEISCNQLLCIPDWACEAKKLEVLDMSYNLLTELPSRTLSSLSLRKLMVGHNHVQSLPPLLEHIPLEVLDLQHNLITKLPEMMFFKALNLRYLNVSANSLESLPGEESLSALQLLYLTNNNLTDQCIPDLVGHPNLRVLHLANNQLQTFPASKLSKLEQLEELNLSGNKLKTIPTTIANCKQLHTLIAHSNEISIFPEILHLPRIQFVDLSCNELTEIVIPEVLPATLQELDLTGNTNLVLEHKTLDIFSHIATLKIDAKPSLTADSVLSSTLWNHGLAEMAGQRNKLCVSALALGSFADSVEAVYGMFDGDKNEELPRLLQCTMADVLLEEVQQSNIDSVFMSNTFLVSHRKLGMAGQKLGSSAVLCYIRHDGTDLAGSFTLTLANVGTCQAILCRSGKPLPLSKVFSLEQYPEEARRVKEQKAIITEVSSAFLQLSFHPSIWV
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(1572240..1572522,1572942..1573136,1574029..1574139,1575177..1575307,1577616..1577778,1580240..1580428,1581300..1581455,1588456..1588551,1593683..1593743,1596941..1597143,1598009..1598239,1606635..1606781,1617285..1617439,1621125..1621250,1622062..1622252,1645223..1645356,1666706..1666953,1693608..1693709))
location: region:1572240-1693709:-1
so has part: feature:1693608-1693709:-1:exon
so has part: feature:1666706-1666953:-1:exon
so has part: feature:1645223-1645356:-1:exon
so has part: feature:1622062-1622252:-1:exon
so has part: feature:1621125-1621250:-1:exon
so has part: feature:1617285-1617439:-1:exon
so has part: feature:1606635-1606781:-1:exon
so has part: feature:1598009-1598239:-1:exon
so has part: feature:1596941-1597143:-1:exon
so has part: feature:1593683-1593743:-1:exon
so has part: feature:1588456-1588551:-1:exon
so has part: feature:1581300-1581455:-1:exon
so has part: feature:1580240-1580428:-1:exon
so has part: feature:1577616-1577778:-1:exon
so has part: feature:1575177-1575307:-1:exon
so has part: feature:1574029-1574139:-1:exon
so has part: feature:1572942-1573136:-1:exon
so has part: feature:1572240-1572522:-1:exon

XP_034644262.1
type: Protein
SIO_000068: ncbiprotein

position:1572240:-1
position: 1572240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693709:-1
position: 1693709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1693608-1693709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1666706-1666953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1645223-1645356:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1622062-1622252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1621125-1621250:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1617285-1617439:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1606635-1606781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1598009-1598239:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1596941-1597143:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1593683-1593743:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1588456-1588551:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1581300-1581455:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1580240-1580428:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1577616-1577778:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1575177-1575307:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1574029-1574139:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1572942-1573136:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1572240-1572522:-1:exon

AP1G1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1705271..1777443)
location: region:1705271-1777443:-1
so has part: feature:1705271-1777443:-1:exon
subclass of: SO_0000010

117886503
type: Gene
SIO_000068: ncbigene

position:1705271:-1
position: 1705271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1777443:-1
position: 1777443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1705271-1777443:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_034788373.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(1705271..1709439,1716155..1716253,1717161..1717321,1717567..1717662,1718174..1718300,1718832..1718973,1720708..1720812,1722882..1723009,1723594..1723683,1724137..1724259,1727433..1727487,1728108..1728248,1732908..1733021,1733533..1733588,1735020..1735118,1735406..1735486,1735893..1735988,1742608..1742684,1748977..1749073,1749537..1749678,1759137..1759261,1777211..1777443))
location: region:1705271-1777443:-1
so has part: feature:1777211-1777443:-1:exon
so has part: feature:1759137-1759261:-1:exon
so has part: feature:1749537-1749678:-1:exon
so has part: feature:1748977-1749073:-1:exon
so has part: feature:1742608-1742684:-1:exon
so has part: feature:1735893-1735988:-1:exon
so has part: feature:1735406-1735486:-1:exon
so has part: feature:1735020-1735118:-1:exon
so has part: feature:1733533-1733588:-1:exon
so has part: feature:1732908-1733021:-1:exon
so has part: feature:1728108-1728248:-1:exon
so has part: feature:1727433-1727487:-1:exon
so has part: feature:1724137-1724259:-1:exon
so has part: feature:1723594-1723683:-1:exon
so has part: feature:1722882-1723009:-1:exon
so has part: feature:1720708-1720812:-1:exon
so has part: feature:1718832-1718973:-1:exon
so has part: feature:1718174-1718300:-1:exon
so has part: feature:1717567-1717662:-1:exon
so has part: feature:1717161-1717321:-1:exon
so has part: feature:1716155-1716253:-1:exon
so has part: feature:1705271-1709439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1777211-1777443:-1:exon

position:1777211:-1
position: 1777211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1759137-1759261:-1:exon

position:1759137:-1
position: 1759137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1759261:-1
position: 1759261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1749537-1749678:-1:exon

position:1749537:-1
position: 1749537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1749678:-1
position: 1749678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1748977-1749073:-1:exon

position:1748977:-1
position: 1748977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1749073:-1
position: 1749073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1742608-1742684:-1:exon

position:1742608:-1
position: 1742608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1742684:-1
position: 1742684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1735893-1735988:-1:exon

position:1735893:-1
position: 1735893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1735988:-1
position: 1735988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1735406-1735486:-1:exon

position:1735406:-1
position: 1735406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1735486:-1
position: 1735486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1735020-1735118:-1:exon

position:1735020:-1
position: 1735020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1735118:-1
position: 1735118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1733533-1733588:-1:exon

position:1733533:-1
position: 1733533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1733588:-1
position: 1733588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1732908-1733021:-1:exon

position:1732908:-1
position: 1732908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1733021:-1
position: 1733021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1728108-1728248:-1:exon

position:1728108:-1
position: 1728108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1728248:-1
position: 1728248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1727433-1727487:-1:exon

position:1727433:-1
position: 1727433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1727487:-1
position: 1727487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1724137-1724259:-1:exon

position:1724137:-1
position: 1724137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1724259:-1
position: 1724259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1723594-1723683:-1:exon

position:1723594:-1
position: 1723594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1723683:-1
position: 1723683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1722882-1723009:-1:exon

position:1722882:-1
position: 1722882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1723009:-1
position: 1723009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1720708-1720812:-1:exon

position:1720708:-1
position: 1720708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1720812:-1
position: 1720812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1718832-1718973:-1:exon

position:1718832:-1
position: 1718832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1718973:-1
position: 1718973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1718174-1718300:-1:exon

position:1718174:-1
position: 1718174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1718300:-1
position: 1718300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1717567-1717662:-1:exon

position:1717567:-1
position: 1717567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1717662:-1
position: 1717662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1717161-1717321:-1:exon

position:1717161:-1
position: 1717161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1717321:-1
position: 1717321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1716155-1716253:-1:exon

position:1716155:-1
position: 1716155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1716253:-1
position: 1716253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1705271-1709439:-1:exon

position:1709439:-1
position: 1709439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: AP1G1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_034788372.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(1705271..1709439,1716155..1716253,1717161..1717321,1717567..1717662,1718174..1718300,1718832..1718973,1720708..1720812,1722882..1723009,1723594..1723683,1724137..1724259,1727433..1727487,1728108..1728248,1732908..1733021,1733533..1733588,1735020..1735118,1735406..1735486,1735893..1735988,1739983..1739991,1742608..1742684,1748977..1749073,1749537..1749678,1759137..1759261,1777211..1777443))
location: region:1705271-1777443:-1
so has part: feature:1777211-1777443:-1:exon
so has part: feature:1759137-1759261:-1:exon
so has part: feature:1749537-1749678:-1:exon
so has part: feature:1748977-1749073:-1:exon
so has part: feature:1742608-1742684:-1:exon
so has part: feature:1739983-1739991:-1:exon
so has part: feature:1735893-1735988:-1:exon
so has part: feature:1735406-1735486:-1:exon
so has part: feature:1735020-1735118:-1:exon
so has part: feature:1733533-1733588:-1:exon
so has part: feature:1732908-1733021:-1:exon
so has part: feature:1728108-1728248:-1:exon
so has part: feature:1727433-1727487:-1:exon
so has part: feature:1724137-1724259:-1:exon
so has part: feature:1723594-1723683:-1:exon
so has part: feature:1722882-1723009:-1:exon
so has part: feature:1720708-1720812:-1:exon
so has part: feature:1718832-1718973:-1:exon
so has part: feature:1718174-1718300:-1:exon
so has part: feature:1717567-1717662:-1:exon
so has part: feature:1717161-1717321:-1:exon
so has part: feature:1716155-1716253:-1:exon
so has part: feature:1705271-1709439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1777211-1777443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1759137-1759261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1749537-1749678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1748977-1749073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1742608-1742684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1739983-1739991:-1:exon

position:1739983:-1
position: 1739983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1739991:-1
position: 1739991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1735893-1735988:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1735406-1735486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1735020-1735118:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1733533-1733588:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1732908-1733021:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1728108-1728248:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1727433-1727487:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1724137-1724259:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1723594-1723683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1722882-1723009:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1720708-1720812:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1718832-1718973:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1718174-1718300:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1717567-1717662:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1717161-1717321:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1716155-1716253:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1705271-1709439:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X2
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLSHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSMEMHAYTVQKLYKAILGDYSQQPLVQVASWCMGEYGDLLISGQCEEEEPVQVTEEEVLDILESVLISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRSALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPTSQANDLLDLLGGNDITPVIPTAPTSKPASAGGELLDLLGDLNLTASPAPVPAPQISQPPFLLDGLSSQPLFNDIAAGIPSITAYSKNGLKIEFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSSIPAFNTGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(1709338..1709439,1716155..1716253,1717161..1717321,1717567..1717662,1718174..1718300,1718832..1718973,1720708..1720812,1722882..1723009,1723594..1723683,1724137..1724259,1727433..1727487,1728108..1728248,1732908..1733021,1733533..1733588,1735020..1735118,1735406..1735486,1735893..1735988,1742608..1742684,1748977..1749073,1749537..1749678,1759137..1759261,1777211..1777411))
location: region:1709338-1777411:-1
so has part: feature:1777211-1777411:-1:exon
so has part: feature:1759137-1759261:-1:exon
so has part: feature:1749537-1749678:-1:exon
so has part: feature:1748977-1749073:-1:exon
so has part: feature:1742608-1742684:-1:exon
so has part: feature:1735893-1735988:-1:exon
so has part: feature:1735406-1735486:-1:exon
so has part: feature:1735020-1735118:-1:exon
so has part: feature:1733533-1733588:-1:exon
so has part: feature:1732908-1733021:-1:exon
so has part: feature:1728108-1728248:-1:exon
so has part: feature:1727433-1727487:-1:exon
so has part: feature:1724137-1724259:-1:exon
so has part: feature:1723594-1723683:-1:exon
so has part: feature:1722882-1723009:-1:exon
so has part: feature:1720708-1720812:-1:exon
so has part: feature:1718832-1718973:-1:exon
so has part: feature:1718174-1718300:-1:exon
so has part: feature:1717567-1717662:-1:exon
so has part: feature:1717161-1717321:-1:exon
so has part: feature:1716155-1716253:-1:exon
so has part: feature:1709338-1709439:-1:exon

XP_034644264.1
type: Protein
SIO_000068: ncbiprotein

position:1709338:-1
position: 1709338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1777411:-1
position: 1777411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1777211-1777411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1759137-1759261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1749537-1749678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1748977-1749073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1742608-1742684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1735893-1735988:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1735406-1735486:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1735020-1735118:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1733533-1733588:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1732908-1733021:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1728108-1728248:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1727433-1727487:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1724137-1724259:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1723594-1723683:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1722882-1723009:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1720708-1720812:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1718832-1718973:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1718174-1718300:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1717567-1717662:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1717161-1717321:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1716155-1716253:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1709338-1709439:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X1
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLSHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSMEMHAYTVQKLYKAILGDYSQQPLVQVASWCMGEYGDLLISGQCEEEEPVQVTEEEVLDILESVLISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRSALLERMPVMEKVTTNGPTEIVQTNGETEPAVLETKPPPSGLQPTSQANDLLDLLGGNDITPVIPTAPTSKPASAGGELLDLLGDLNLTASPAPVPAPQISQPPFLLDGLSSQPLFNDIAAGIPSITAYSKNGLKIEFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSSIPAFNTGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(1709338..1709439,1716155..1716253,1717161..1717321,1717567..1717662,1718174..1718300,1718832..1718973,1720708..1720812,1722882..1723009,1723594..1723683,1724137..1724259,1727433..1727487,1728108..1728248,1732908..1733021,1733533..1733588,1735020..1735118,1735406..1735486,1735893..1735988,1739983..1739991,1742608..1742684,1748977..1749073,1749537..1749678,1759137..1759261,1777211..1777411))
location: region:1709338-1777411:-1
so has part: feature:1777211-1777411:-1:exon
so has part: feature:1759137-1759261:-1:exon
so has part: feature:1749537-1749678:-1:exon
so has part: feature:1748977-1749073:-1:exon
so has part: feature:1742608-1742684:-1:exon
so has part: feature:1739983-1739991:-1:exon
so has part: feature:1735893-1735988:-1:exon
so has part: feature:1735406-1735486:-1:exon
so has part: feature:1735020-1735118:-1:exon
so has part: feature:1733533-1733588:-1:exon
so has part: feature:1732908-1733021:-1:exon
so has part: feature:1728108-1728248:-1:exon
so has part: feature:1727433-1727487:-1:exon
so has part: feature:1724137-1724259:-1:exon
so has part: feature:1723594-1723683:-1:exon
so has part: feature:1722882-1723009:-1:exon
so has part: feature:1720708-1720812:-1:exon
so has part: feature:1718832-1718973:-1:exon
so has part: feature:1718174-1718300:-1:exon
so has part: feature:1717567-1717662:-1:exon
so has part: feature:1717161-1717321:-1:exon
so has part: feature:1716155-1716253:-1:exon
so has part: feature:1709338-1709439:-1:exon

XP_034644263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1777211-1777411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1759137-1759261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1749537-1749678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1748977-1749073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1742608-1742684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1739983-1739991:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1735893-1735988:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1735406-1735486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1735020-1735118:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1733533-1733588:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1732908-1733021:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1728108-1728248:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1727433-1727487:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1724137-1724259:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1723594-1723683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1722882-1723009:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1720708-1720812:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1718832-1718973:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1718174-1718300:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1717567-1717662:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1717161-1717321:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1716155-1716253:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1709338-1709439:-1:exon

LOC117886874
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117886874
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1730714..1730800)
location: region:1730714-1730800:-1
so has part: feature:1730714-1730800:-1:exon
subclass of: SO_0000578

117886874
type: Gene
SIO_000068: ncbigene

position:1730714:-1
position: 1730714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1730800:-1
position: 1730800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1730714-1730800:-1:exon

LOC117886874
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: snoRNA
gene: LOC117886874
product: small nucleolar RNA SNORD71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00576
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004648078.1
SIO_010081: LOC117886874
subclass of: SO_0000673
so part of: LOC117886874
location: complement(1730714..1730800)
location: region:1730714-1730800:-1
so has part: feature:1730714-1730800:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1730714-1730800:-1:exon

ATXN1L
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1841348..1845659
location: region:1841348-1845659:1
so has part: feature:1841348-1845659:1:exon
subclass of: SO_0000010

117886522
type: Gene
SIO_000068: ncbigene

position:1841348:1
position: 1841348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1845659:1
position: 1845659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1841348-1845659:1:exon

ATXN1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ATXN1L
product: ataxin 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034788399.1
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: 1841348..1845659
location: region:1841348-1845659:1
so has part: feature:1841348-1845659:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1841348-1845659:1:exon

ATXN1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ataxin-1-like
translation: MKPAHERSQECLPPKKRDLPVTSEDVGRVASCSTNHTPVSDAPEWCRSVVVTGQSQAPLRYGLGSDGAEAVAGLTVDQYGMLYKVAVPPATFSPTGLHPVVNMSPLPPSFNVTSSLIQHPGIPYSPIHYAQIPSTSLQFIGSHYTVPYAVPPSFLPSPLLSPSANLTTSHVPRFVPYASLFTEEATPSPQTTSPAHAFSKAAAVISPSGQMQHHAGVQPLDITQSRVPVYYQMSRLPPGYSAYESATVGGSPDPPLQESQLSSEVASANGGQRHLEHSVVRRTSEALASASNKAEGPQPGAAVQCVVDGQLFSGYQTLRTEDSVPAHRSTPDTDLEVQRVVGVLASQDYSILAAQRKDGLSPLNLCHNIPDQQGESRGLLRNPVETAEKSQARSPYVMSPEEPVRHRQLPKGMVVANGKPVLVRIGSEPIRSSASEILMRESPDAQICGSSRDKDTAQLQPPSSSHLPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGFVTLHFVVGEQQSKVSIDVPPEHPFFVYGQGWSSCSPGRTAQLFALPCHRLQVGDVCISISLQSLNGNSASPANCPLAGQLVPTRERPERTGQGPREPSDRASERKNQTERDSAAQISCTDSSQPDPGAQHCWTAPGFQRYSMQGEGSRPSLLRPSFIPQEVKLSIEGRSNAGK
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: 1841460..1843550
location: region:1841460-1843550:1
so has part: feature:1841460-1843550:1:exon

XP_034644290.1
type: Protein
SIO_000068: ncbiprotein

position:1841460:1
position: 1841460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1843550:1
position: 1843550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1841460-1843550:1:exon

ZNF821
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1853713..>1869071)
location: region:1853713-1869071:-1
so has part: feature:1853713-1869071:-1:exon
subclass of: SO_0000010

117886603
type: Gene
SIO_000068: ncbigene

position:1853713:-1
position: 1853713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1869071:-1
position: 1869071
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1853713-1869071:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ZNF821
product: zinc finger protein 821
inference: similar to RNA sequence, mRNA (same species):INSD:JW360348.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 115 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_034788584.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(1853713..1854626,1855440..1855606,1856676..1856780,1857870..1858018,1858185..1858310,1868982..>1869071))
location: region:1853713-1869071:-1
so has part: feature:1868982-1869071:-1:exon
so has part: feature:1858185-1858310:-1:exon
so has part: feature:1857870-1858018:-1:exon
so has part: feature:1856676-1856780:-1:exon
so has part: feature:1855440-1855606:-1:exon
so has part: feature:1853713-1854626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1868982-1869071:-1:exon

position:1868982:-1
position: 1868982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1858185-1858310:-1:exon

position:1858185:-1
position: 1858185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858310:-1
position: 1858310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1857870-1858018:-1:exon

position:1857870:-1
position: 1857870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858018:-1
position: 1858018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1856676-1856780:-1:exon

position:1856676:-1
position: 1856676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856780:-1
position: 1856780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1855440-1855606:-1:exon

position:1855440:-1
position: 1855440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1855606:-1
position: 1855606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1853713-1854626:-1:exon

position:1854626:-1
position: 1854626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821
translation: MSRRKQTTPNKVHWEQVFAGLEEQARQAMMKSDFPGAFGDQRPTIHQLQDQDSSSSDSEGEEEETTQDEVSSHTSEEDGTMVKVKKEFETAEQPVAGNQRIGANEVTEDLNTGPMLGLSQCPLCQLECGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLADSLPTPHSEGPSGAEEKDVAFNAPVYPAGILLVCNNCAAYRKLLEAQAPGVRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMAFEEQSNSTLH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(1853975..1854626,1855440..1855606,1856676..1856780,1857870..1858018,1858185..1858310,1868982..1869021))
location: region:1853975-1869021:-1
so has part: feature:1868982-1869021:-1:exon
so has part: feature:1858185-1858310:-1:exon
so has part: feature:1857870-1858018:-1:exon
so has part: feature:1856676-1856780:-1:exon
so has part: feature:1855440-1855606:-1:exon
so has part: feature:1853975-1854626:-1:exon

XP_034644475.1
type: Protein
SIO_000068: ncbiprotein

position:1853975:-1
position: 1853975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1869021:-1
position: 1869021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1868982-1869021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1858185-1858310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1857870-1858018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1856676-1856780:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1855440-1855606:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1853975-1854626:-1:exon

LOC117886604
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117886604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1864198..1868950)
location: region:1864198-1868950:-1
so has part: feature:1864198-1868950:-1:exon
subclass of: SO_0000011

117886604
type: Gene
SIO_000068: ncbigene

position:1864198:-1
position: 1864198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1868950:-1
position: 1868950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1864198-1868950:-1:exon

LOC117886604
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117886604
product: uncharacterized LOC117886604
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XR_004648003.1
SIO_010081: LOC117886604
subclass of: SO_0000673
so part of: LOC117886604
location: complement(join(1864198..1864755,1866548..1868950))
location: region:1864198-1868950:-1
so has part: feature:1866548-1868950:-1:exon
so has part: feature:1864198-1864755:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1866548-1868950:-1:exon

position:1866548:-1
position: 1866548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1864198-1864755:-1:exon

position:1864755:-1
position: 1864755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IST1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1898976..1907043
location: region:1898976-1907043:1
so has part: feature:1898976-1907043:1:exon
subclass of: SO_0000010

117886540
type: Gene
SIO_000068: ncbigene

position:1898976:1
position: 1898976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1907043:1
position: 1907043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1898976-1907043:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_034788450.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(1898976..1899187,1899658..1899745,1900539..1900622,1901035..1901145,1901488..1901664,1902685..1902777,1903978..1904026,1905790..1907043)
location: region:1898976-1907043:1
so has part: feature:1898976-1899187:1:exon
so has part: feature:1899658-1899745:1:exon
so has part: feature:1900539-1900622:1:exon
so has part: feature:1901035-1901145:1:exon
so has part: feature:1901488-1901664:1:exon
so has part: feature:1902685-1902777:1:exon
so has part: feature:1903978-1904026:1:exon
so has part: feature:1905790-1907043:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1898976-1899187:1:exon

position:1899187:1
position: 1899187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1899658-1899745:1:exon

position:1899658:1
position: 1899658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1899745:1
position: 1899745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1900539-1900622:1:exon

position:1900539:1
position: 1900539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1900622:1
position: 1900622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1901035-1901145:1:exon

position:1901035:1
position: 1901035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1901145:1
position: 1901145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1901488-1901664:1:exon

position:1901488:1
position: 1901488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1901664:1
position: 1901664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1902685-1902777:1:exon

position:1902685:1
position: 1902685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1902777:1
position: 1902777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1903978-1904026:1:exon

position:1903978:1
position: 1903978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1904026:1
position: 1904026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1905790-1907043:1:exon

position:1905790:1
position: 1905790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: IST1
product: IST1 factor associated with ESCRT-III, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_034788451.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(1898976..1899187,1899658..1899745,1900539..1900622,1901035..1901145,1901488..1901664,1902685..1902777,1904020..1904026,1905790..1907043)
location: region:1898976-1907043:1
so has part: feature:1898976-1899187:1:exon
so has part: feature:1899658-1899745:1:exon
so has part: feature:1900539-1900622:1:exon
so has part: feature:1901035-1901145:1:exon
so has part: feature:1901488-1901664:1:exon
so has part: feature:1902685-1902777:1:exon
so has part: feature:1904020-1904026:1:exon
so has part: feature:1905790-1907043:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1898976-1899187:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1899658-1899745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1900539-1900622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1901035-1901145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1901488-1901664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1902685-1902777:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1904020-1904026:1:exon

position:1904020:1
position: 1904020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1905790-1907043:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X1
translation: MPCPVAELAQKARKEIADYLASGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKDLDTGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPTGVETDLIDVGFIDDMKKGGRGGGGGGFTAPLVGPDGVVPMPMPMPSPYPPLKGPEIFNGVPVGTYQPFTNIHPPPIPAAPPTYESVDDLSTDKDVSSAQVAGPGPKPEASTKPGTGAPDIYDNFVLPELPSVPDTLPAASAGANTSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(1898991..1899187,1899658..1899745,1900539..1900622,1901035..1901145,1901488..1901664,1902685..1902777,1903978..1904026,1905790..1905989)
location: region:1898991-1905989:1
so has part: feature:1898991-1899187:1:exon
so has part: feature:1899658-1899745:1:exon
so has part: feature:1900539-1900622:1:exon
so has part: feature:1901035-1901145:1:exon
so has part: feature:1901488-1901664:1:exon
so has part: feature:1902685-1902777:1:exon
so has part: feature:1903978-1904026:1:exon
so has part: feature:1905790-1905989:1:exon

XP_034644341.1
type: Protein
SIO_000068: ncbiprotein

position:1898991:1
position: 1898991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1905989:1
position: 1905989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1898991-1899187:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1899658-1899745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1900539-1900622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1901035-1901145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1901488-1901664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1902685-1902777:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1903978-1904026:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1905790-1905989:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X2
translation: MPCPVAELAQKARKEIADYLASGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKDLDTGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPTGVETDLIDVGFIDDMKKGGRGGGGGGFTAPLVGPDGVVPMPMPMPSPYPPLKGPEIFNGVPVGTYQPFTNIHPPPIPAAPPTYESVAGPGPKPEASTKPGTGAPDIYDNFVLPELPSVPDTLPAASAGANTSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(1898991..1899187,1899658..1899745,1900539..1900622,1901035..1901145,1901488..1901664,1902685..1902777,1904020..1904026,1905790..1905989)
location: region:1898991-1905989:1
so has part: feature:1898991-1899187:1:exon
so has part: feature:1899658-1899745:1:exon
so has part: feature:1900539-1900622:1:exon
so has part: feature:1901035-1901145:1:exon
so has part: feature:1901488-1901664:1:exon
so has part: feature:1902685-1902777:1:exon
so has part: feature:1904020-1904026:1:exon
so has part: feature:1905790-1905989:1:exon

XP_034644342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1898991-1899187:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1899658-1899745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1900539-1900622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1901035-1901145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1901488-1901664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1902685-1902777:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1904020-1904026:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1905790-1905989:1:exon

PKD1L3
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: PKD1L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1918808..1948326)
location: region:1918808-1948326:-1
so has part: feature:1918808-1948326:-1:exon
subclass of: SO_0000010

117886735
type: Gene
SIO_000068: ncbigene

position:1918808:-1
position: 1918808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1948326:-1
position: 1948326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1918808-1948326:-1:exon

PKD1L3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PKD1L3
product: polycystin 1 like 3, transient receptor potential channel interacting
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034788779.1
SIO_010081: PKD1L3
subclass of: SO_0000673
so part of: PKD1L3
location: complement(join(1918808..1918972,1919423..1919544,1919875..1920008,1920738..1921017,1922045..1922230,1923524..1923667,1924808..1924907,1926857..1927091,1927173..1927356,1928949..1929129,1929515..1929711,1930074..1930276,1930425..1930571,1930802..1930980,1932748..1932849,1933364..1933594,1934404..1934597,1934901..1935132,1936409..1936534,1940367..1940493,1940571..1940698,1941970..1942149,1942495..1942626,1944399..1944493,1944992..1945040,1945243..1945402,1946085..1946316,1947382..1947516,1948134..1948326))
location: region:1918808-1948326:-1
so has part: feature:1948134-1948326:-1:exon
so has part: feature:1947382-1947516:-1:exon
so has part: feature:1946085-1946316:-1:exon
so has part: feature:1945243-1945402:-1:exon
so has part: feature:1944992-1945040:-1:exon
so has part: feature:1944399-1944493:-1:exon
so has part: feature:1942495-1942626:-1:exon
so has part: feature:1941970-1942149:-1:exon
so has part: feature:1940571-1940698:-1:exon
so has part: feature:1940367-1940493:-1:exon
so has part: feature:1936409-1936534:-1:exon
so has part: feature:1934901-1935132:-1:exon
so has part: feature:1934404-1934597:-1:exon
so has part: feature:1933364-1933594:-1:exon
so has part: feature:1932748-1932849:-1:exon
so has part: feature:1930802-1930980:-1:exon
so has part: feature:1930425-1930571:-1:exon
so has part: feature:1930074-1930276:-1:exon
so has part: feature:1929515-1929711:-1:exon
so has part: feature:1928949-1929129:-1:exon
so has part: feature:1927173-1927356:-1:exon
so has part: feature:1926857-1927091:-1:exon
so has part: feature:1924808-1924907:-1:exon
so has part: feature:1923524-1923667:-1:exon
so has part: feature:1922045-1922230:-1:exon
so has part: feature:1920738-1921017:-1:exon
so has part: feature:1919875-1920008:-1:exon
so has part: feature:1919423-1919544:-1:exon
so has part: feature:1918808-1918972:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1948134-1948326:-1:exon

position:1948134:-1
position: 1948134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1947382-1947516:-1:exon

position:1947382:-1
position: 1947382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1947516:-1
position: 1947516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1946085-1946316:-1:exon

position:1946085:-1
position: 1946085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1946316:-1
position: 1946316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1945243-1945402:-1:exon

position:1945243:-1
position: 1945243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1945402:-1
position: 1945402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1944992-1945040:-1:exon

position:1944992:-1
position: 1944992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1945040:-1
position: 1945040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1944399-1944493:-1:exon

position:1944399:-1
position: 1944399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1944493:-1
position: 1944493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1942495-1942626:-1:exon

position:1942495:-1
position: 1942495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1942626:-1
position: 1942626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1941970-1942149:-1:exon

position:1941970:-1
position: 1941970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1942149:-1
position: 1942149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1940571-1940698:-1:exon

position:1940571:-1
position: 1940571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1940698:-1
position: 1940698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1940367-1940493:-1:exon

position:1940367:-1
position: 1940367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1940493:-1
position: 1940493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1936409-1936534:-1:exon

position:1936409:-1
position: 1936409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1936534:-1
position: 1936534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1934901-1935132:-1:exon

position:1934901:-1
position: 1934901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1935132:-1
position: 1935132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1934404-1934597:-1:exon

position:1934404:-1
position: 1934404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1934597:-1
position: 1934597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1933364-1933594:-1:exon

position:1933364:-1
position: 1933364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1933594:-1
position: 1933594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1932748-1932849:-1:exon

position:1932748:-1
position: 1932748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1932849:-1
position: 1932849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1930802-1930980:-1:exon

position:1930802:-1
position: 1930802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1930980:-1
position: 1930980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1930425-1930571:-1:exon

position:1930425:-1
position: 1930425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1930571:-1
position: 1930571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1930074-1930276:-1:exon

position:1930074:-1
position: 1930074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1930276:-1
position: 1930276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1929515-1929711:-1:exon

position:1929515:-1
position: 1929515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1929711:-1
position: 1929711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1928949-1929129:-1:exon

position:1928949:-1
position: 1928949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1929129:-1
position: 1929129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1927173-1927356:-1:exon

position:1927173:-1
position: 1927173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1927356:-1
position: 1927356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1926857-1927091:-1:exon

position:1926857:-1
position: 1926857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1927091:-1
position: 1927091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1924808-1924907:-1:exon

position:1924808:-1
position: 1924808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1924907:-1
position: 1924907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1923524-1923667:-1:exon

position:1923524:-1
position: 1923524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1923667:-1
position: 1923667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1922045-1922230:-1:exon

position:1922045:-1
position: 1922045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1922230:-1
position: 1922230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1920738-1921017:-1:exon

position:1920738:-1
position: 1920738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1921017:-1
position: 1921017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1919875-1920008:-1:exon

position:1919875:-1
position: 1919875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1920008:-1
position: 1920008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1919423-1919544:-1:exon

position:1919423:-1
position: 1919423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1919544:-1
position: 1919544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1918808-1918972:-1:exon

position:1918972:-1
position: 1918972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PKD1L3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PKD1L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycystic kidney disease protein 1-like 3
translation: MGDVCYKFVRLRNSFCGAQAWCQANGGRLAHPWNPETQALLSHCLAEGEKWWVGLREHPGEKNPGFSAHGADAAVTPSPAGCSYLIRDSGAIRSRRDTCAQELYFICQFDWGEQERNLTGGHQASHRDQHRHQTGHGDRHSQQTGRGDRHSHQTGHGDRHSQQTGRGDRHSHQVGRGDRHRHQARRRCMLQSRGTAPGQAFDPPGFGSSAGEKLARFCLSFLLSSAGHLVQRRDAATAWPTHSCRKNMCNGTQTTAGTATALQDPNLDPFTVNPWTLLQEASSERAIQAAEETMRQFNQAIRTLHHLPALQRACHTLQRLTQGTSLLSEAAQREASESLLYLSTQLLQAPLLSNSSGSDTSTSAATSLFQSFSHLLTAMDSSTPTSHWARNQLTEVLENTMAALTAIQTVLWEGSCAVESSVTVTSPVASTMLSSRNASTLPRSSYHLAQPVPLTLAFPSASAWGVLLSKHPRVQVWVTVLAVNPFKHLDGKEIRSVGNIFLTANKDSIEVQDLPEDIEIRLWRDERAETSPTRLNVSTEEFVVEVNVTSMEDTLIVCVLPDVPLPIELYLGYQHPPNSTHALLNTTLPTGHGQHPGDNYTWVLPPAMLQLGPGPYHIKAVVRQSPEQELPSHVTYTITTVATQCHFWDHHRKAWRQDGCQVGPQSTVSSIQCLCNHLSVFGSSFFAVPRTVDIQDTGKLLCKVASNPIGVALLASLLVLHGVVGVWAWRRDQVDDRKVKVTILADSDPGAHVRYVVQVFTGYRRGADTTAKVVLTLYGTEGRSEPHCLRDPHKPVFERGGLDVFLVTTRSSLGELHNIRLWHDNSGSSPSWYVRQVVVSDVTARRKWHFLCSTWLAADLGDCQLDQVFPAASRSELLSSRHLFCSALVEKVTHDHLWLSVLTHCPWNPFTRLQRLACCLTLLLCTMVINIMFWRDLPEAGNQAALQPGRVLLTWQELVTSVQTALILLPINLVVGHIFQLVPPQELPLPPTGVRLPRASALPRGPSPLTRITQELKATVGFLSRTKVCLEPEVLPQEMDSVPELVRSLCCLVGSHLRRSSHRGVEPAEPCLANDSHHHLSSHLRHVLGPLQAQLRALDLNKLCNPHDYLQAAGRLQSLLEQLEQPGRRLEPGPARGGRSFPISEPRVQKATIPCRPPREAAFICWVTVAAASLASAYFTVLLSLKLDRQRATSWVISMLLSLLQNIFIMQPLKVAGLTLLFSLVLKKMLWQDKGKEQQLQRILALLARCPYLELPGTRDWNDPVYHPPCPRPAPPRRGRTWKKKKLYTQLGEIVAQLVLLASLMVVCYTERSPHELYFNEAIRKSITPNFYHIRGLGDFYRWAHGTLLPSLDGPRPGFISDGNALLLGSVRLRQLRPQPQHQVCSCRQQDAGGHGPGWGPPGQSRGAQDSIWVNHGAESLGEHPVWGQLSLYPGGGYLAHLGTNSSHAHSVLQYLERSRWLDGCSCAIFVEFTVYNANVNLFCVVTLLLETPGTGAFLPSAELQSIRLYSSSGLTQLTCAQVTYLLLLLFYLWVQGQRLKQQKWRYFRSQRNVLDISIILISLAAFGVYIKCRLLQKSVMEKYHQDRSR
SIO_010081: PKD1L3
subclass of: SO_0000673
so part of: PKD1L3
location: complement(join(1918808..1918972,1919423..1919544,1919875..1920008,1920738..1921017,1922045..1922230,1923524..1923667,1924808..1924907,1926857..1927091,1927173..1927356,1928949..1929129,1929515..1929711,1930074..1930276,1930425..1930571,1930802..1930980,1932748..1932849,1933364..1933594,1934404..1934597,1934901..1935132,1936409..1936534,1940367..1940493,1940571..1940698,1941970..1942149,1942495..1942626,1944399..1944493,1944992..1945040,1945243..1945402,1946085..1946316,1947382..1947516,1948134..1948326))
location: region:1918808-1948326:-1
so has part: feature:1948134-1948326:-1:exon
so has part: feature:1947382-1947516:-1:exon
so has part: feature:1946085-1946316:-1:exon
so has part: feature:1945243-1945402:-1:exon
so has part: feature:1944992-1945040:-1:exon
so has part: feature:1944399-1944493:-1:exon
so has part: feature:1942495-1942626:-1:exon
so has part: feature:1941970-1942149:-1:exon
so has part: feature:1940571-1940698:-1:exon
so has part: feature:1940367-1940493:-1:exon
so has part: feature:1936409-1936534:-1:exon
so has part: feature:1934901-1935132:-1:exon
so has part: feature:1934404-1934597:-1:exon
so has part: feature:1933364-1933594:-1:exon
so has part: feature:1932748-1932849:-1:exon
so has part: feature:1930802-1930980:-1:exon
so has part: feature:1930425-1930571:-1:exon
so has part: feature:1930074-1930276:-1:exon
so has part: feature:1929515-1929711:-1:exon
so has part: feature:1928949-1929129:-1:exon
so has part: feature:1927173-1927356:-1:exon
so has part: feature:1926857-1927091:-1:exon
so has part: feature:1924808-1924907:-1:exon
so has part: feature:1923524-1923667:-1:exon
so has part: feature:1922045-1922230:-1:exon
so has part: feature:1920738-1921017:-1:exon
so has part: feature:1919875-1920008:-1:exon
so has part: feature:1919423-1919544:-1:exon
so has part: feature:1918808-1918972:-1:exon

XP_034644670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1948134-1948326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1947382-1947516:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1946085-1946316:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1945243-1945402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1944992-1945040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1944399-1944493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1942495-1942626:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1941970-1942149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1940571-1940698:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1940367-1940493:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1936409-1936534:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1934901-1935132:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1934404-1934597:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1933364-1933594:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1932748-1932849:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1930802-1930980:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1930425-1930571:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1930074-1930276:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1929515-1929711:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1928949-1929129:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1927173-1927356:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1926857-1927091:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1924808-1924907:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1923524-1923667:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1922045-1922230:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1920738-1921017:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1919875-1920008:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1919423-1919544:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1918808-1918972:-1:exon

DHX38
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2007847..2031021
location: region:2007847-2031021:1
so has part: feature:2007847-2031021:1:exon
subclass of: SO_0000010

117886818
type: Gene
SIO_000068: ncbigene

position:2007847:1
position: 2007847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2031021:1
position: 2031021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2007847-2031021:1:exon

DHX38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: DHX38
product: DEAH-box helicase 38
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_034788879.1
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(2007847..2008208,2008864..2009051,2009207..2009317,2009755..2009926,2010742..2010860,2011000..2011076,2011985..2012140,2013856..2014017,2015141..2015248,2024812..2024924,2025012..2025149,2025467..2025653,2025730..2025915,2026634..2026774,2026925..2027035,2027214..2027330,2027548..2027655,2027770..2027882,2028368..2028576,2028686..2028840,2028944..2029099,2029191..2029325,2029492..2029617,2030043..2030138,2030432..2030553,2030763..2031021)
location: region:2007847-2031021:1
so has part: feature:2007847-2008208:1:exon
so has part: feature:2008864-2009051:1:exon
so has part: feature:2009207-2009317:1:exon
so has part: feature:2009755-2009926:1:exon
so has part: feature:2010742-2010860:1:exon
so has part: feature:2011000-2011076:1:exon
so has part: feature:2011985-2012140:1:exon
so has part: feature:2013856-2014017:1:exon
so has part: feature:2015141-2015248:1:exon
so has part: feature:2024812-2024924:1:exon
so has part: feature:2025012-2025149:1:exon
so has part: feature:2025467-2025653:1:exon
so has part: feature:2025730-2025915:1:exon
so has part: feature:2026634-2026774:1:exon
so has part: feature:2026925-2027035:1:exon
so has part: feature:2027214-2027330:1:exon
so has part: feature:2027548-2027655:1:exon
so has part: feature:2027770-2027882:1:exon
so has part: feature:2028368-2028576:1:exon
so has part: feature:2028686-2028840:1:exon
so has part: feature:2028944-2029099:1:exon
so has part: feature:2029191-2029325:1:exon
so has part: feature:2029492-2029617:1:exon
so has part: feature:2030043-2030138:1:exon
so has part: feature:2030432-2030553:1:exon
so has part: feature:2030763-2031021:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2007847-2008208:1:exon

position:2008208:1
position: 2008208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2008864-2009051:1:exon

position:2008864:1
position: 2008864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2009051:1
position: 2009051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2009207-2009317:1:exon

position:2009207:1
position: 2009207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2009317:1
position: 2009317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2009755-2009926:1:exon

position:2009755:1
position: 2009755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2009926:1
position: 2009926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2010742-2010860:1:exon

position:2010742:1
position: 2010742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2010860:1
position: 2010860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2011000-2011076:1:exon

position:2011000:1
position: 2011000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2011076:1
position: 2011076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2011985-2012140:1:exon

position:2011985:1
position: 2011985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2012140:1
position: 2012140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2013856-2014017:1:exon

position:2013856:1
position: 2013856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2014017:1
position: 2014017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2015141-2015248:1:exon

position:2015141:1
position: 2015141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2015248:1
position: 2015248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2024812-2024924:1:exon

position:2024812:1
position: 2024812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024924:1
position: 2024924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2025012-2025149:1:exon

position:2025012:1
position: 2025012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2025149:1
position: 2025149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2025467-2025653:1:exon

position:2025467:1
position: 2025467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2025653:1
position: 2025653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2025730-2025915:1:exon

position:2025730:1
position: 2025730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2025915:1
position: 2025915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2026634-2026774:1:exon

position:2026634:1
position: 2026634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2026774:1
position: 2026774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2026925-2027035:1:exon

position:2026925:1
position: 2026925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2027035:1
position: 2027035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2027214-2027330:1:exon

position:2027214:1
position: 2027214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2027330:1
position: 2027330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2027548-2027655:1:exon

position:2027548:1
position: 2027548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2027655:1
position: 2027655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2027770-2027882:1:exon

position:2027770:1
position: 2027770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2027882:1
position: 2027882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2028368-2028576:1:exon

position:2028368:1
position: 2028368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2028576:1
position: 2028576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2028686-2028840:1:exon

position:2028686:1
position: 2028686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2028840:1
position: 2028840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2028944-2029099:1:exon

position:2028944:1
position: 2028944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2029099:1
position: 2029099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2029191-2029325:1:exon

position:2029191:1
position: 2029191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2029325:1
position: 2029325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2029492-2029617:1:exon

position:2029492:1
position: 2029492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2029617:1
position: 2029617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2030043-2030138:1:exon

position:2030043:1
position: 2030043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2030138:1
position: 2030138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2030432-2030553:1:exon

position:2030432:1
position: 2030432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2030553:1
position: 2030553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2030763-2031021:1:exon

position:2030763:1
position: 2030763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHX38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
translation: MEDVPEDTSMHRLEGADLETQVGGLIIKKKSACSEQHVFKAPAPRTSLLGLDLLAAQKRREREEKEDAEDKKKSKVSSYKDWEEAKDDLGGSEEEGSDRASRSSRQDRHYRSAHVETPSHTGGVSEEFWERSRQRERERREHGVYASSKEEKEHKRGRNRERDHDRKRDREERDRSRHSSSRSEKDGSSERGSSRRGEPESPRHRPKDAATPSRSSWEEEDSGYGSSRRSQWESPSPTPSYRDSERDRSHRASSARDADRRDRDRSVKNKYPDETPLPTPSYKYNEWADDRRHLGATPRLSRGKGRREDAEEGISFETEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEEYVKKREQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDNAAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKKAQHKHWELAGTKLGDIMGIKKEEEPDQTLTEDGKVDYRTEQKFADHMKEKSEASSEFAKKKSIVEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGVSLGEEVGYAIRFEDCTSENTVIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRADLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDVLFSKTPQEDYVEAAVKQALQVHLSGAPGDILIFMPGQEDIEVASEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGAMDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNSYSMLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGSDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTSVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEVSAMEEEMALAEEQLRARREEQERRNPLGSVRSLKIYTPGRKEQGEPMTPRRTPARFGL
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(2007886..2008208,2008864..2009051,2009207..2009317,2009755..2009926,2010742..2010860,2011000..2011076,2011985..2012140,2013856..2014017,2015141..2015248,2024812..2024924,2025012..2025149,2025467..2025653,2025730..2025915,2026634..2026774,2026925..2027035,2027214..2027330,2027548..2027655,2027770..2027882,2028368..2028576,2028686..2028840,2028944..2029099,2029191..2029325,2029492..2029617,2030043..2030138,2030432..2030553,2030763..2030847)
location: region:2007886-2030847:1
so has part: feature:2007886-2008208:1:exon
so has part: feature:2008864-2009051:1:exon
so has part: feature:2009207-2009317:1:exon
so has part: feature:2009755-2009926:1:exon
so has part: feature:2010742-2010860:1:exon
so has part: feature:2011000-2011076:1:exon
so has part: feature:2011985-2012140:1:exon
so has part: feature:2013856-2014017:1:exon
so has part: feature:2015141-2015248:1:exon
so has part: feature:2024812-2024924:1:exon
so has part: feature:2025012-2025149:1:exon
so has part: feature:2025467-2025653:1:exon
so has part: feature:2025730-2025915:1:exon
so has part: feature:2026634-2026774:1:exon
so has part: feature:2026925-2027035:1:exon
so has part: feature:2027214-2027330:1:exon
so has part: feature:2027548-2027655:1:exon
so has part: feature:2027770-2027882:1:exon
so has part: feature:2028368-2028576:1:exon
so has part: feature:2028686-2028840:1:exon
so has part: feature:2028944-2029099:1:exon
so has part: feature:2029191-2029325:1:exon
so has part: feature:2029492-2029617:1:exon
so has part: feature:2030043-2030138:1:exon
so has part: feature:2030432-2030553:1:exon
so has part: feature:2030763-2030847:1:exon

XP_034644770.1
type: Protein
SIO_000068: ncbiprotein

position:2007886:1
position: 2007886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2030847:1
position: 2030847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2007886-2008208:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2008864-2009051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2009207-2009317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2009755-2009926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2010742-2010860:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2011000-2011076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2011985-2012140:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2013856-2014017:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2015141-2015248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2024812-2024924:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2025012-2025149:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2025467-2025653:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2025730-2025915:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2026634-2026774:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2026925-2027035:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2027214-2027330:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2027548-2027655:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2027770-2027882:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2028368-2028576:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2028686-2028840:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2028944-2029099:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2029191-2029325:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2029492-2029617:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2030043-2030138:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2030432-2030553:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2030763-2030847:1:exon

PMFBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: PMFBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2032011..2276723)
location: region:2032011-2276723:-1
so has part: feature:2032011-2276723:-1:exon
subclass of: SO_0000010

117886816
type: Gene
SIO_000068: ncbigene

position:2032011:-1
position: 2032011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2276723:-1
position: 2276723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2032011-2276723:-1:exon

PMFBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: PMFBP1
product: polyamine modulated factor 1 binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034788878.1
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(2032011..2032237,2032313..2032406,2033079..2033153,2033479..2033588,2033859..2033921,2034261..2034428,2034515..2034682,2035294..2035461,2035814..2035981,2036302..2036455,2036722..2036911,2037375..2037621,2037838..2037995,2038589..2038715,2038890..2039012,2043341..2043556,2044347..2044577,2045242..2045484,2046846..2047013,2047768..2047851,2048253..2048420,2049227..2049406,2050414..2050581,2051894..2051977,2053408..2053566,2059705..2059851,2106641..2106724,2125040..2125231,2129370..2129453,2135066..2135212,2135708..2135791,2137335..2137412,2156412..2156558,2199871..2200003,2216332..2216399,2276599..2276723))
location: region:2032011-2276723:-1
so has part: feature:2276599-2276723:-1:exon
so has part: feature:2216332-2216399:-1:exon
so has part: feature:2199871-2200003:-1:exon
so has part: feature:2156412-2156558:-1:exon
so has part: feature:2137335-2137412:-1:exon
so has part: feature:2135708-2135791:-1:exon
so has part: feature:2135066-2135212:-1:exon
so has part: feature:2129370-2129453:-1:exon
so has part: feature:2125040-2125231:-1:exon
so has part: feature:2106641-2106724:-1:exon
so has part: feature:2059705-2059851:-1:exon
so has part: feature:2053408-2053566:-1:exon
so has part: feature:2051894-2051977:-1:exon
so has part: feature:2050414-2050581:-1:exon
so has part: feature:2049227-2049406:-1:exon
so has part: feature:2048253-2048420:-1:exon
so has part: feature:2047768-2047851:-1:exon
so has part: feature:2046846-2047013:-1:exon
so has part: feature:2045242-2045484:-1:exon
so has part: feature:2044347-2044577:-1:exon
so has part: feature:2043341-2043556:-1:exon
so has part: feature:2038890-2039012:-1:exon
so has part: feature:2038589-2038715:-1:exon
so has part: feature:2037838-2037995:-1:exon
so has part: feature:2037375-2037621:-1:exon
so has part: feature:2036722-2036911:-1:exon
so has part: feature:2036302-2036455:-1:exon
so has part: feature:2035814-2035981:-1:exon
so has part: feature:2035294-2035461:-1:exon
so has part: feature:2034515-2034682:-1:exon
so has part: feature:2034261-2034428:-1:exon
so has part: feature:2033859-2033921:-1:exon
so has part: feature:2033479-2033588:-1:exon
so has part: feature:2033079-2033153:-1:exon
so has part: feature:2032313-2032406:-1:exon
so has part: feature:2032011-2032237:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2276599-2276723:-1:exon

position:2276599:-1
position: 2276599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2216332-2216399:-1:exon

position:2216332:-1
position: 2216332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2216399:-1
position: 2216399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2199871-2200003:-1:exon

position:2199871:-1
position: 2199871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2200003:-1
position: 2200003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2156412-2156558:-1:exon

position:2156412:-1
position: 2156412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2156558:-1
position: 2156558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2137335-2137412:-1:exon

position:2137335:-1
position: 2137335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2137412:-1
position: 2137412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2135708-2135791:-1:exon

position:2135708:-1
position: 2135708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2135791:-1
position: 2135791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2135066-2135212:-1:exon

position:2135066:-1
position: 2135066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2135212:-1
position: 2135212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2129370-2129453:-1:exon

position:2129370:-1
position: 2129370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2129453:-1
position: 2129453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2125040-2125231:-1:exon

position:2125040:-1
position: 2125040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2125231:-1
position: 2125231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2106641-2106724:-1:exon

position:2106641:-1
position: 2106641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2106724:-1
position: 2106724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2059705-2059851:-1:exon

position:2059705:-1
position: 2059705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2059851:-1
position: 2059851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2053408-2053566:-1:exon

position:2053408:-1
position: 2053408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2053566:-1
position: 2053566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2051894-2051977:-1:exon

position:2051894:-1
position: 2051894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2051977:-1
position: 2051977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2050414-2050581:-1:exon

position:2050414:-1
position: 2050414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2050581:-1
position: 2050581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2049227-2049406:-1:exon

position:2049227:-1
position: 2049227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2049406:-1
position: 2049406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2048253-2048420:-1:exon

position:2048253:-1
position: 2048253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2048420:-1
position: 2048420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2047768-2047851:-1:exon

position:2047768:-1
position: 2047768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2047851:-1
position: 2047851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2046846-2047013:-1:exon

position:2046846:-1
position: 2046846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2047013:-1
position: 2047013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2045242-2045484:-1:exon

position:2045242:-1
position: 2045242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2045484:-1
position: 2045484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2044347-2044577:-1:exon

position:2044347:-1
position: 2044347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2044577:-1
position: 2044577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2043341-2043556:-1:exon

position:2043341:-1
position: 2043341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2043556:-1
position: 2043556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2038890-2039012:-1:exon

position:2038890:-1
position: 2038890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2039012:-1
position: 2039012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2038589-2038715:-1:exon

position:2038589:-1
position: 2038589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2038715:-1
position: 2038715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2037838-2037995:-1:exon

position:2037838:-1
position: 2037838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2037995:-1
position: 2037995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2037375-2037621:-1:exon

position:2037375:-1
position: 2037375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2037621:-1
position: 2037621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2036722-2036911:-1:exon

position:2036722:-1
position: 2036722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2036911:-1
position: 2036911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2036302-2036455:-1:exon

position:2036302:-1
position: 2036302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2036455:-1
position: 2036455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2035814-2035981:-1:exon

position:2035814:-1
position: 2035814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2035981:-1
position: 2035981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2035294-2035461:-1:exon

position:2035294:-1
position: 2035294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2035461:-1
position: 2035461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2034515-2034682:-1:exon

position:2034515:-1
position: 2034515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2034682:-1
position: 2034682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2034261-2034428:-1:exon

position:2034261:-1
position: 2034261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2034428:-1
position: 2034428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2033859-2033921:-1:exon

position:2033859:-1
position: 2033859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2033921:-1
position: 2033921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2033479-2033588:-1:exon

position:2033479:-1
position: 2033479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2033588:-1
position: 2033588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2033079-2033153:-1:exon

position:2033079:-1
position: 2033079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2033153:-1
position: 2033153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2032313-2032406:-1:exon

position:2032313:-1
position: 2032313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2032406:-1
position: 2032406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2032011-2032237:-1:exon

position:2032237:-1
position: 2032237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PMFBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: PMFBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine-modulated factor 1-binding protein 1
translation: MDLSDQNNVLVQTMEELERESEWKVATLEAELQRPSLAQRPVPTEHLSGSTAAQRTVTPPQQMMEQEELRVQLASNEQLIHQLNVHLREANPSQAKSKAEVLEKEAKIQELQEIITDLHHEISLKDSEAVNQLEEKHLLETTVQSLRQIVSSAPGSRPCERLPSSSRTNELLKTELERRDAKIQTLQSQLLLLQDKRDVLATELDAQEQRIYQLQTKQTERQAELEQKCSRIQQLEQDLEASGRLQEESQRQLGECNACLAQVAGENEALRGHRLEQMLAIEKLMSSLRAWEKASGSLSCEMPARQWEEQAELQQRLADVQDELREKETAVHRLQAELRDASLLAQETKNQLTEAEVEVVTMRSKYSMAQKEAAERGEVLQSLQEASQAQQLRTAEQDGTIRTLQSQLQKQLEKRQGAEEQMSRQHQTIQALEEKQAQLQAHCHHLEEETGFLHARLEAQGLVLENEHMLVTNQSCHREEQVETLTRELLKAKAEVQAAEQKARRWEDTIGQLKDSLAASQVSQEAAESRAQHKEEQLQGLQRKGQSLHQELKMAQREAAQLEALLSTSQLESCSLKKELQRKDEELQRLQEQLRDSQEALQGARQGKEDVQKESETQLLQRDQLVEQQKADLVAAREELSRCAGQLAELRSDQQQQAGELAVLRERQKTAQQEVCSREQTIRKLRGDLKSAEEELARAKDEGKERAAEGSGLKGKLHQLQDDVRSLQEICKEQEEAMAEQTCCIQQLQHEREICIGQGQKQAVLVEQLQGELTSRERAHQTELEQLRAKLQHLQQELDVCKGKNQDNLSHLQQRESTMERQSSDLEFLLQQCQTLKEEVLYYEEVVQKQERELCLQQEQLREAQEHLAMAKSKSSSTESSLDLYKKKYQAALNRAGELEGRVQSLEEELRDMSSQMRECDDTIISLCSKQLVLQQEMTSRRNQTAVEQLTQELHATQEELSRSLQHAHQREQSLQGLREQLAATQTKCLADEETLVNMQTEFASYTATHSHANASYESQAAMAEKLQQQLSHADEERAKHSQRAEEYQCLVQDLKLELVRVAEQKNSAMKALGKLELEVQSLRQGTAAEGERKQLEVAKLQQLIQPLECKLQESRRLCAQKEQLLQRRDEQLRQAQAAVRQARSALQERGLEVEKQRAEARSLDVRLQQAQREREQSQAASASLQEEIQRLRQRLQDSQQQQQAAAQQLVQQEERLLLAQSSLQNTQEQLSERVAEGVRLEQASRRLEAEHRVLQEQLSSSTDEVEQSRKLLEHLKAELSEWQQRHQVAVQQGLQHQHSMAKMELNLGSSQEQAKALQQQLQEQESTQQALREELSQLQGREDARQRQLRRAQERERVLASEREELQRELHSSEQAATLQESALAQLQAELEAAQAREQQSARALTAAEETLQALRLTTASCQEKQRETLEKLSETAQDMAALRAELVRTRAREAQLEEGTAACEERTRRLNGELKKLQGFQQQHEQEVQAFEQQLGERSSQVQHWQRRYQENAQALAQRDEDLVVVKVELASLKEKLHGATEERDRLQQDLNLLRQKFVASSNEAEALRSSLGAARSDSRRLHRESELVLANVSQWVKEQKQANDKLGHKIREQIKHIAQLTGEKDHLQEVLARLQQENRHLKGEVAERRIECERLKALQGSGLAARAVLQQPWPLLLGEE
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(2032163..2032237,2032313..2032406,2033079..2033153,2033479..2033588,2033859..2033921,2034261..2034428,2034515..2034682,2035294..2035461,2035814..2035981,2036302..2036455,2036722..2036911,2037375..2037621,2037838..2037995,2038589..2038715,2038890..2039012,2043341..2043556,2044347..2044577,2045242..2045484,2046846..2047013,2047768..2047851,2048253..2048420,2049227..2049406,2050414..2050581,2051894..2051977,2053408..2053566,2059705..2059851,2106641..2106724,2125040..2125231,2129370..2129453,2135066..2135212,2135708..2135791,2137335..2137412,2156412..2156558,2199871..2200003,2216332..2216399,2276599..2276697))
location: region:2032163-2276697:-1
so has part: feature:2276599-2276697:-1:exon
so has part: feature:2216332-2216399:-1:exon
so has part: feature:2199871-2200003:-1:exon
so has part: feature:2156412-2156558:-1:exon
so has part: feature:2137335-2137412:-1:exon
so has part: feature:2135708-2135791:-1:exon
so has part: feature:2135066-2135212:-1:exon
so has part: feature:2129370-2129453:-1:exon
so has part: feature:2125040-2125231:-1:exon
so has part: feature:2106641-2106724:-1:exon
so has part: feature:2059705-2059851:-1:exon
so has part: feature:2053408-2053566:-1:exon
so has part: feature:2051894-2051977:-1:exon
so has part: feature:2050414-2050581:-1:exon
so has part: feature:2049227-2049406:-1:exon
so has part: feature:2048253-2048420:-1:exon
so has part: feature:2047768-2047851:-1:exon
so has part: feature:2046846-2047013:-1:exon
so has part: feature:2045242-2045484:-1:exon
so has part: feature:2044347-2044577:-1:exon
so has part: feature:2043341-2043556:-1:exon
so has part: feature:2038890-2039012:-1:exon
so has part: feature:2038589-2038715:-1:exon
so has part: feature:2037838-2037995:-1:exon
so has part: feature:2037375-2037621:-1:exon
so has part: feature:2036722-2036911:-1:exon
so has part: feature:2036302-2036455:-1:exon
so has part: feature:2035814-2035981:-1:exon
so has part: feature:2035294-2035461:-1:exon
so has part: feature:2034515-2034682:-1:exon
so has part: feature:2034261-2034428:-1:exon
so has part: feature:2033859-2033921:-1:exon
so has part: feature:2033479-2033588:-1:exon
so has part: feature:2033079-2033153:-1:exon
so has part: feature:2032313-2032406:-1:exon
so has part: feature:2032163-2032237:-1:exon

XP_034644769.1
type: Protein
SIO_000068: ncbiprotein

position:2032163:-1
position: 2032163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2276697:-1
position: 2276697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2276599-2276697:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2216332-2216399:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2199871-2200003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2156412-2156558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2137335-2137412:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2135708-2135791:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2135066-2135212:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2129370-2129453:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2125040-2125231:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2106641-2106724:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2059705-2059851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2053408-2053566:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2051894-2051977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2050414-2050581:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2049227-2049406:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2048253-2048420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2047768-2047851:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2046846-2047013:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2045242-2045484:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2044347-2044577:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2043341-2043556:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2038890-2039012:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2038589-2038715:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2037838-2037995:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2037375-2037621:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2036722-2036911:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2036302-2036455:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2035814-2035981:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2035294-2035461:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2034515-2034682:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2034261-2034428:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2033859-2033921:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2033479-2033588:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2033079-2033153:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2032313-2032406:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2032163-2032237:-1:exon

ZFHX3
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2410297..2689886)
location: region:2410297-2689886:-1
so has part: feature:2410297-2689886:-1:exon
subclass of: SO_0000010

117886490
type: Gene
SIO_000068: ncbigene

position:2410297:-1
position: 2410297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2689886:-1
position: 2689886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2410297-2689886:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 31138
gene: ZFHX3
product: zinc finger homeobox 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034788358.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(2410297..2412429,2424402..2429840,2432387..2432489,2442117..2442317,2442555..2442688,2461112..2461219,2531855..2532086,2589846..2590342,2594536..2597279,2689376..2689886))
location: region:2410297-2689886:-1
so has part: feature:2689376-2689886:-1:exon
so has part: feature:2594536-2597279:-1:exon
so has part: feature:2589846-2590342:-1:exon
so has part: feature:2531855-2532086:-1:exon
so has part: feature:2461112-2461219:-1:exon
so has part: feature:2442555-2442688:-1:exon
so has part: feature:2442117-2442317:-1:exon
so has part: feature:2432387-2432489:-1:exon
so has part: feature:2424402-2429840:-1:exon
so has part: feature:2410297-2412429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2689376-2689886:-1:exon

position:2689376:-1
position: 2689376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2594536-2597279:-1:exon

position:2594536:-1
position: 2594536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2597279:-1
position: 2597279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2589846-2590342:-1:exon

position:2589846:-1
position: 2589846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2590342:-1
position: 2590342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2531855-2532086:-1:exon

position:2531855:-1
position: 2531855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2532086:-1
position: 2532086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2461112-2461219:-1:exon

position:2461112:-1
position: 2461112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2461219:-1
position: 2461219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2442555-2442688:-1:exon

position:2442555:-1
position: 2442555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2442688:-1
position: 2442688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2442117-2442317:-1:exon

position:2442117:-1
position: 2442117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2442317:-1
position: 2442317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2432387-2432489:-1:exon

position:2432387:-1
position: 2432387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2432489:-1
position: 2432489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2424402-2429840:-1:exon

position:2424402:-1
position: 2424402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2429840:-1
position: 2429840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2410297-2412429:-1:exon

position:2412429:-1
position: 2412429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 31138
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger homeobox protein 3
translation: MEGCDSPVISGKDNGCGIPQHQQWTELNSTHLPDKPSSMEQSTTENHGALDSLRVPFNERIPDSTNSAGPNTESTSKEVSCNECLASFASLQTYMEHHCPSARPPLPLREESGSDTSEEGDEESDVENLAGEIVYQPDGSAYIVESVNQLIQSGGACGSGALPSFVMNSLPNAGGKQGEPSSAAPVYPQIINTFHIASSFGKWFEGSDQSFPNTSALTGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKNFQHPLVSAANLIGPGHSFYGKFSGIRMEGEEALQTGTASGAEQPPSGILAPGALLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDSGAADSEKQEMGDQDSLSEKAEPAEEVEDEEEEDVEEEEEEEEEEEDDDDEGCKGLFPSELEDELEDRPHEESGAVAGSSSKKDPALSNQSISNSPLMPNVLQTLSRSTASSSSNSASSFVFDGANRRSRLSFNNEGGGASVAEGSRRLDFIDESANKDNATAPEPNESAEGEDGSYISHHQHAGSLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHAAGAAAAAAAAAAAAAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMTQIQHNRHMGLGSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGYQLDPTNPMATMAPSLVGGEIPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERTLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEEEDLGQIFTIRKCPAADAEESVEDVEGLNETPADPEEPTKEQESGSDKDQNKWTAPASQADKELTESPASSKRMSFPSSSESPLSSKWSKTSEETKSEQMYQCPYCKYSNTDVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVSPDCVEKLIMTVTTPEVMMPSSMFLPAATPDRDGNTNAEEPGKQAETSEDSGKSILSSESIEHSGESKPVPADQSSTREDSGFLCWKKGCSQVFKSSSALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYSGLLVNGDLLAMGDPSLADDHTIIVEDDKEEESDLEDKQSPTGSDSGSVQEDSGLEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAASGSGNSNGTGNSSSSSISLGSSTPSPVSTSSSNTFTTTNTSNAGTAPVPSLLNQGSSESVGISSSSNPVSTNIVSPSEPKDVNRKKLADMIASRQQQQQQAQTLAQAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLSGTGPNLLEDLKAQVQLPQQSHTQILQQQQGQLSLSQSHSVHIQQSQHQEKKNKSVIKEKEKETQRERENAERGDSSSLSKESLPDNLKPKDKKDFAPGNSSEPSLLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKTEQGENLEKLECDTCGKFFSNILILKSHQEHVHQH…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(2410877..2412429,2424402..2429840,2432387..2432489,2442117..2442317,2442555..2442688,2461112..2461219,2531855..2532086,2589846..2590342,2594536..2597233))
location: region:2410877-2597233:-1
so has part: feature:2594536-2597233:-1:exon
so has part: feature:2589846-2590342:-1:exon
so has part: feature:2531855-2532086:-1:exon
so has part: feature:2461112-2461219:-1:exon
so has part: feature:2442555-2442688:-1:exon
so has part: feature:2442117-2442317:-1:exon
so has part: feature:2432387-2432489:-1:exon
so has part: feature:2424402-2429840:-1:exon
so has part: feature:2410877-2412429:-1:exon

XP_034644249.1
type: Protein
SIO_000068: ncbiprotein

position:2410877:-1
position: 2410877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2597233:-1
position: 2597233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2594536-2597233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2589846-2590342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2531855-2532086:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2461112-2461219:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2442555-2442688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2442117-2442317:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2432387-2432489:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2424402-2429840:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2410877-2412429:-1:exon

LOC117886706
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117886706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2828984..2832616
location: region:2828984-2832616:1
so has part: feature:2828984-2832616:1:exon
subclass of: SO_0000011

117886706
type: Gene
SIO_000068: ncbigene

position:2828984:1
position: 2828984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2832616:1
position: 2832616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2828984-2832616:1:exon

LOC117886706
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117886706
product: uncharacterized LOC117886706, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004648041.1
SIO_010081: LOC117886706
subclass of: SO_0000673
so part of: LOC117886706
location: join(2828984..2829518,2830309..2830455,2830671..2830796,2831457..2831580,2832327..2832616)
location: region:2828984-2832616:1
so has part: feature:2828984-2829518:1:exon
so has part: feature:2830309-2830455:1:exon
so has part: feature:2830671-2830796:1:exon
so has part: feature:2831457-2831580:1:exon
so has part: feature:2832327-2832616:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2828984-2829518:1:exon

position:2829518:1
position: 2829518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2830309-2830455:1:exon

position:2830309:1
position: 2830309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2830455:1
position: 2830455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2830671-2830796:1:exon

position:2830671:1
position: 2830671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2830796:1
position: 2830796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2831457-2831580:1:exon

position:2831457:1
position: 2831457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2831580:1
position: 2831580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2832327-2832616:1:exon

position:2832327:1
position: 2832327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117886706
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117886706
product: uncharacterized LOC117886706, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004648040.1
SIO_010081: LOC117886706
subclass of: SO_0000673
so part of: LOC117886706
location: join(2830221..2830455,2830671..2830796,2831457..2831580,2832327..2832616)
location: region:2830221-2832616:1
so has part: feature:2830221-2830455:1:exon
so has part: feature:2830671-2830796:1:exon
so has part: feature:2831457-2831580:1:exon
so has part: feature:2832327-2832616:1:exon

position:2830221:1
position: 2830221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2830221-2830455:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2830671-2830796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2831457-2831580:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2832327-2832616:1:exon

LOC117886572
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: LOC117886572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3560225..3602700)
location: region:3560225-3602700:-1
so has part: feature:3560225-3602700:-1:exon
subclass of: SO_0000011

117886572
type: Gene
SIO_000068: ncbigene

position:3560225:-1
position: 3560225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3602700:-1
position: 3602700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3560225-3602700:-1:exon

LOC117886572
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 31138
nc RNA class: lncRNA
gene: LOC117886572
product: uncharacterized LOC117886572
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004647997.1
SIO_010081: LOC117886572
subclass of: SO_0000673
so part of: LOC117886572
location: complement(join(3560225..3560381,3564525..3564649,3602227..3602700))
location: region:3560225-3602700:-1
so has part: feature:3602227-3602700:-1:exon
so has part: feature:3564525-3564649:-1:exon
so has part: feature:3560225-3560381:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3602227-3602700:-1:exon

position:3602227:-1
position: 3602227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3564525-3564649:-1:exon

position:3564525:-1
position: 3564525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3564649:-1
position: 3564649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3560225-3560381:-1:exon

position:3560381:-1
position: 3560381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMD7
type: Gene
subclass of: SO_0000704
RO_0002162: 31138
gene: PSMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3602672..3619095
location: region:3602672-3619095:1
so has part: feature:3602672-3619095:1:exon
subclass of: SO_0000010