Paraburkholderia terrae strain KU-64 chromosome 4, complete sequence.
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Paraburkholderia.
Identification and characterization of a novel class of self-sufficient cytochrome P450 hydroxylase involved in cyclohexanecarboxylate degradation in Paraburkholderia terrae strain KU-64
Submitted (29-JUL-2021) Contact:Hiroaki Iwaki Kansai University, Department of Life Science and Biotechnology; Yamate-cho 3-3-35, Suita, Osaka 564-8680, Japan
REFSEQ INFORMATION: The reference sequence is identical to\nAP024958.1.\nAnnotated by DFAST https://dfast.ddbj.nig.ac.jp/\n\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3\nGenome Coverage :: 66x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/23/2023 05:21:40\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 9,459\nCDSs (total) :: 9,365\nGenes (coding) :: 9,159\nCDSs (with protein) :: 9,159\nGenes (RNA) :: 94\nrRNAs :: 7, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 7, 7 (5S, 16S, 23S)\ntRNAs :: 69\nncRNAs :: 4\nPseudo Genes (total) :: 206\nCDSs (without protein) :: 206\nPseudo Genes (ambiguous residues) :: 0 of 206\nPseudo Genes (frameshifted) :: 78 of 206\nPseudo Genes (incomplete) :: 153 of 206\nPseudo Genes (internal stop) :: 29 of 206\nPseudo Genes (multiple problems) :: 47 of 206\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_006484960.1
GO:0004803 - transposase activity [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014193801.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018311461.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018311462.1
COORDINATES: similar to AA sequence:RefSeq:WP_011481673.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018437600.1
COORDINATES: protein motif:HMM:NF017528.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_017685557.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_013094681.1
COORDINATES: similar to AA sequence:RefSeq:WP_013587663.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012367363.1
COORDINATES: similar to AA sequence:RefSeq:WP_009769812.1
COORDINATES: similar to AA sequence:RefSeq:WP_009769811.1
COORDINATES: similar to AA sequence:RefSeq:WP_009769810.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007737716.1
COORDINATES: similar to AA sequence:RefSeq:WP_009769579.1
type II toxin-antitoxin system CcdA family antitoxin
COORDINATES: protein motif:HMM:NF013965.2
COORDINATES: similar to AA sequence:RefSeq:WP_009769581.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004265.1
COORDINATES: similar to AA sequence:RefSeq:WP_008920297.1
GO:0051983 - regulation of chromosome segregation [Evidence IEA]
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_008920296.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_047215127.1
COORDINATES: similar to AA sequence:RefSeq:WP_007732000.1
COORDINATES: protein motif:HMM:NF024863.2
COORDINATES: similar to AA sequence:RefSeq:WP_016354881.1
COORDINATES: protein motif:HMM:NF025923.2
COORDINATES: protein motif:HMM:NF026066.2
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012406202.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012406201.1
COORDINATES: similar to AA sequence:RefSeq:WP_011488672.1
COORDINATES: similar to AA sequence:RefSeq:WP_007176439.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406196.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406195.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406194.1
COORDINATES: protein motif:HMM:NF012424.2
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017776411.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017917.2
COORDINATES: similar to AA sequence:RefSeq:WP_004188586.1
COORDINATES: similar to AA sequence:RefSeq:WP_012400496.1
COORDINATES: similar to AA sequence:RefSeq:WP_018310975.1
COORDINATES: similar to AA sequence:RefSeq:WP_007748191.1
COORDINATES: similar to AA sequence:RefSeq:WP_008918359.1
COORDINATES: similar to AA sequence:RefSeq:WP_011351613.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007741995.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007745879.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611267.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428455.1
COORDINATES: similar to AA sequence:RefSeq:WP_007745881.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012427412.1
lecithin retinol acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012427411.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_020202552.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012218067.1
COORDINATES: similar to AA sequence:RefSeq:WP_011829256.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]
Cd(II)/Pb(II)-responsive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006050742.1
GO:0008804 - carbamate kinase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011488690.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012427434.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427433.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0043858 - arginine:ornithine antiporter activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014722787.1
COORDINATES: similar to AA sequence:RefSeq:WP_011490734.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007178347.1
COORDINATES: similar to AA sequence:RefSeq:WP_008921759.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587084.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587083.1
COORDINATES: similar to AA sequence:RefSeq:WP_004558030.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
fumarate/nitrate reduction transcriptional regulator Fnr
COORDINATES: similar to AA sequence:RefSeq:WP_007732661.1
COORDINATES: similar to AA sequence:RefSeq:WP_007738619.1
COORDINATES: similar to AA sequence:RefSeq:WP_009900457.1
COORDINATES: similar to AA sequence:RefSeq:WP_007738618.1
COORDINATES: similar to AA sequence:RefSeq:WP_009968117.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587077.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587076.1
COORDINATES: similar to AA sequence:RefSeq:WP_007738614.1
COORDINATES: similar to AA sequence:RefSeq:WP_003271008.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587073.1
COORDINATES: similar to AA sequence:RefSeq:WP_009895310.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012400531.1
COORDINATES: similar to AA sequence:RefSeq:WP_017233257.1
COORDINATES: similar to AA sequence:RefSeq:WP_012400529.1
COORDINATES: similar to AA sequence:RefSeq:WP_017233259.1
COORDINATES: similar to AA sequence:RefSeq:WP_012400527.1
COORDINATES: similar to AA sequence:RefSeq:WP_012400526.1
COORDINATES: similar to AA sequence:RefSeq:WP_012400525.1
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012400524.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587068.1
COORDINATES: similar to AA sequence:RefSeq:WP_013591972.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587067.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587065.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587064.1
COORDINATES: similar to AA sequence:RefSeq:WP_007734793.1
COORDINATES: protein motif:HMM:NF022625.2
COORDINATES: similar to AA sequence:RefSeq:WP_011853754.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406172.1
COORDINATES: similar to AA sequence:RefSeq:WP_006415444.1
COORDINATES: similar to AA sequence:RefSeq:WP_011853753.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004532709.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050780.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432618.1
bifunctional aminoglycoside phosphotransferase/ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013339313.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634057.1
COORDINATES: similar to AA sequence:RefSeq:WP_009917550.1
COORDINATES: similar to AA sequence:RefSeq:WP_017775702.1
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012400516.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF016836.2
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_012400515.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011488696.1
COORDINATES: similar to AA sequence:RefSeq:WP_012372510.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427455.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427410.1
rhomboid family intramembrane serine protease
COORDINATES: similar to AA sequence:RefSeq:WP_007587061.1
COORDINATES: similar to AA sequence:RefSeq:WP_009897451.1
COORDINATES: similar to AA sequence:RefSeq:WP_019255051.1
COORDINATES: similar to AA sequence:RefSeq:WP_012400509.1
COORDINATES: similar to AA sequence:RefSeq:WP_018434581.1
COORDINATES: similar to AA sequence:RefSeq:WP_012400507.1
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013343335.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587057.1
COORDINATES: similar to AA sequence:RefSeq:WP_007733890.1
COORDINATES: similar to AA sequence:RefSeq:WP_011488675.1
COORDINATES: similar to AA sequence:RefSeq:WP_013342198.1
COORDINATES: similar to AA sequence:RefSeq:WP_007579181.1
COORDINATES: similar to AA sequence:RefSeq:WP_017775776.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012400501.1
1-phosphofructokinase family hexose kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012400500.1
GO:0015444 - P-type magnesium transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007587054.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587053.1
COORDINATES: similar to AA sequence:RefSeq:WP_013435623.1
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007587052.1
COORDINATES: similar to AA sequence:RefSeq:WP_018433000.1
DnaJ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012405480.1
COORDINATES: similar to AA sequence:RefSeq:WP_011488680.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012405278.1
COORDINATES: similar to AA sequence:RefSeq:WP_017772333.1
COORDINATES: similar to AA sequence:RefSeq:WP_007181564.1
COORDINATES: similar to AA sequence:RefSeq:WP_011488663.1
COORDINATES: similar to AA sequence:RefSeq:WP_006026912.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020749716.1
COORDINATES: similar to AA sequence:RefSeq:WP_020067719.1
COORDINATES: similar to AA sequence:RefSeq:WP_018433005.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009896454.1
COORDINATES: similar to AA sequence:RefSeq:WP_009899875.1
COORDINATES: similar to AA sequence:RefSeq:WP_013690240.1
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010094388.1
COORDINATES: protein motif:HMM:NF024935.2
COORDINATES: similar to AA sequence:RefSeq:WP_018433020.1
COORDINATES: similar to AA sequence:RefSeq:WP_015601023.1
GO:0005275 - amine transmembrane transporter activity [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012400491.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050712.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404862.1
COORDINATES: protein motif:HMM:NF024954.2
COORDINATES: similar to AA sequence:RefSeq:WP_007587545.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405482.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428189.1
COORDINATES: similar to AA sequence:RefSeq:WP_010107118.1
COORDINATES: similar to AA sequence:RefSeq:WP_013591476.1
COORDINATES: similar to AA sequence:RefSeq:WP_007576410.1
COORDINATES: similar to AA sequence:RefSeq:WP_007576408.1
COORDINATES: similar to AA sequence:RefSeq:WP_008903540.1
COORDINATES: similar to AA sequence:RefSeq:WP_018433168.1
GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008922624.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012403868.1
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012405279.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770008.1
COORDINATES: similar to AA sequence:RefSeq:WP_007740954.1
COORDINATES: similar to AA sequence:RefSeq:WP_007740959.1
COORDINATES: protein motif:HMM:NF012599.2
COORDINATES: similar to AA sequence:RefSeq:WP_007735025.1
COORDINATES: similar to AA sequence:RefSeq:WP_007740961.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770014.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004554989.1
COORDINATES: similar to AA sequence:RefSeq:WP_007740973.1
COORDINATES: similar to AA sequence:RefSeq:WP_004528370.1
COORDINATES: similar to AA sequence:RefSeq:WP_007740976.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770017.1
NADH-quinone oxidoreductase subunit B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007740980.1
COORDINATES: similar to AA sequence:RefSeq:WP_011481311.1
GO:0015074 - DNA integration [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_007734487.1
GO:0015114 - phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]; GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014192233.1
COORDINATES: similar to AA sequence:RefSeq:WP_015878080.1
COORDINATES: similar to AA sequence:RefSeq:WP_013698298.1
COORDINATES: similar to AA sequence:RefSeq:WP_004193771.1
COORDINATES: similar to AA sequence:RefSeq:WP_020067081.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406663.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771424.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_011490887.1
COORDINATES: similar to AA sequence:RefSeq:WP_007730200.1
COORDINATES: similar to AA sequence:RefSeq:WP_007730201.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493101.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020203042.1
COORDINATES: similar to AA sequence:RefSeq:WP_015914554.1
COORDINATES: similar to AA sequence:RefSeq:WP_011298069.1
COORDINATES: similar to AA sequence:RefSeq:WP_011298068.1
COORDINATES: similar to AA sequence:RefSeq:WP_011298067.1
COORDINATES: similar to AA sequence:RefSeq:WP_013394572.1
COORDINATES: similar to AA sequence:RefSeq:WP_011660160.1
COORDINATES: similar to AA sequence:RefSeq:WP_011879773.1
COORDINATES: similar to AA sequence:RefSeq:WP_007732520.1
COORDINATES: similar to AA sequence:RefSeq:WP_007578036.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013584.2
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_012405453.1
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009894617.1
COORDINATES: similar to AA sequence:RefSeq:WP_009894619.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405450.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012405449.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006762421.1
COORDINATES: similar to AA sequence:RefSeq:WP_006027185.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405447.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405526.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405525.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012405524.1
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013338261.1
COORDINATES: similar to AA sequence:RefSeq:WP_013338262.1
COORDINATES: similar to AA sequence:RefSeq:WP_011800932.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_012403861.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019451288.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405444.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012405443.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741003.1
COORDINATES: similar to AA sequence:RefSeq:WP_008343410.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_009770336.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405439.1
bifunctional protein tyrosine phosphatase family protein/NAD(P)/FAD-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_012405437.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405436.1
GO:0042597 - periplasmic space [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011880346.1
COORDINATES: similar to AA sequence:RefSeq:WP_009769576.1
COORDINATES: similar to AA sequence:RefSeq:WP_007747300.1
COORDINATES: similar to AA sequence:RefSeq:WP_019572540.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015446 - ATPase-coupled arsenite transmembrane transporter activity [Evidence IEA]
GO:0071722 - detoxification of arsenic-containing substance [Evidence IEA]
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013721480.1
COORDINATES: similar to AA sequence:RefSeq:WP_007749697.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432951.1
COORDINATES: similar to AA sequence:RefSeq:WP_011000214.1
COORDINATES: similar to AA sequence:RefSeq:WP_011000215.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406693.1
COORDINATES: similar to AA sequence:RefSeq:WP_011488770.1
COORDINATES: similar to AA sequence:RefSeq:WP_012354629.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406694.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406695.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432952.1
COORDINATES: similar to AA sequence:RefSeq:WP_013954380.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071160.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094714.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050631.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406686.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093422.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093421.1
COORDINATES: similar to AA sequence:RefSeq:WP_004194389.1
COORDINATES: similar to AA sequence:RefSeq:WP_006759516.1
COORDINATES: similar to AA sequence:RefSeq:WP_011545774.1
COORDINATES: similar to AA sequence:RefSeq:WP_006047184.1
COORDINATES: similar to AA sequence:RefSeq:WP_004522089.1
COORDINATES: similar to AA sequence:RefSeq:WP_012433533.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015004225.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004226.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004227.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004228.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004229.1
COORDINATES: similar to AA sequence:RefSeq:WP_006751146.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093386.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004233.1
COORDINATES: similar to AA sequence:RefSeq:WP_006158740.1
COORDINATES: similar to AA sequence:RefSeq:WP_010092698.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004236.1
COORDINATES: similar to AA sequence:RefSeq:WP_006416628.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004238.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004239.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071164.1
COORDINATES: similar to AA sequence:RefSeq:WP_012435669.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020071169.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071170.1
COORDINATES: similar to AA sequence:RefSeq:WP_011490132.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]
SOS response-associated peptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014194252.1
COORDINATES: similar to AA sequence:RefSeq:WP_014194253.1
GO:0045027 - DNA end binding [Evidence IEA]
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012406665.1
COORDINATES: protein motif:HMM:NF013500.2
COORDINATES: protein motif:HMM:NF025569.2
COORDINATES: similar to AA sequence:RefSeq:WP_011493956.1
COORDINATES: similar to AA sequence:RefSeq:WP_006476481.1
COORDINATES: similar to AA sequence:RefSeq:WP_006476480.1
COORDINATES: protein motif:HMM:NF014349.2
COORDINATES: protein motif:HMM:NF033590.1
COORDINATES: similar to AA sequence:RefSeq:WP_007742081.1
COORDINATES: similar to AA sequence:RefSeq:WP_013393639.1
COORDINATES: similar to AA sequence:RefSeq:WP_007579273.1
COORDINATES: similar to AA sequence:RefSeq:WP_011297648.1
COORDINATES: similar to AA sequence:RefSeq:WP_003073461.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012575.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018443313.1
COORDINATES: protein motif:HMM:NF023431.2
COORDINATES: similar to AA sequence:RefSeq:WP_003275776.1
COORDINATES: similar to AA sequence:RefSeq:WP_017523520.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011297647.1
COORDINATES: similar to AA sequence:RefSeq:WP_011297650.1
non-heme iron oxygenase ferredoxin subunit
COORDINATES: protein motif:HMM:NF015047.2
COORDINATES: similar to AA sequence:RefSeq:WP_011694483.1
COORDINATES: similar to AA sequence:RefSeq:WP_007740894.1
COORDINATES: protein motif:HMM:TIGR00229.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_018310921.1
COORDINATES: similar to AA sequence:RefSeq:WP_009769854.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345675.1
COORDINATES: similar to AA sequence:RefSeq:WP_011490588.1
COORDINATES: similar to AA sequence:RefSeq:WP_017330817.1
COORDINATES: similar to AA sequence:RefSeq:WP_011488048.1
COORDINATES: similar to AA sequence:RefSeq:WP_007584088.1
COORDINATES: similar to AA sequence:RefSeq:WP_020652927.1
COORDINATES: similar to AA sequence:RefSeq:WP_007584091.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051697.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011876082.1
COORDINATES: similar to AA sequence:RefSeq:WP_018907559.1
COORDINATES: similar to AA sequence:RefSeq:WP_018907560.1
GO:0006749 - glutathione metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018907561.1
glutathione-dependent disulfide-bond oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_018907321.1
COORDINATES: similar to AA sequence:RefSeq:WP_018907323.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018442690.1
COORDINATES: similar to AA sequence:RefSeq:WP_018907319.1
COORDINATES: similar to AA sequence:RefSeq:WP_014972103.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006767171.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253300.1
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_009770474.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770491.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428007.1
low affinity iron permease family protein
COORDINATES: protein motif:HMM:NF025559.2
L-2-amino-thiazoline-4-carboxylic acid hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_018420915.1
COORDINATES: similar to AA sequence:RefSeq:WP_018311464.1
COORDINATES: similar to AA sequence:RefSeq:WP_007749161.1
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: similar to AA sequence:RefSeq:WP_016834096.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612074.1
COORDINATES: similar to AA sequence:RefSeq:WP_007583941.1
COORDINATES: similar to AA sequence:RefSeq:WP_012211067.1
COORDINATES: similar to AA sequence:RefSeq:WP_012211068.1
COORDINATES: similar to AA sequence:RefSeq:WP_014194245.1
COORDINATES: similar to AA sequence:RefSeq:WP_011616901.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420284.1
COORDINATES: similar to AA sequence:RefSeq:WP_009965512.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612082.1
COORDINATES: similar to AA sequence:RefSeq:WP_006760994.1
COORDINATES: similar to AA sequence:RefSeq:WP_011798326.1
COORDINATES: similar to AA sequence:RefSeq:WP_012732728.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071128.1
COORDINATES: similar to AA sequence:RefSeq:WP_007749694.1
COORDINATES: similar to AA sequence:RefSeq:WP_007749692.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004453.1
COORDINATES: similar to AA sequence:RefSeq:WP_007577192.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004291.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770619.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004290.1
COORDINATES: similar to AA sequence:RefSeq:WP_007589561.1
TraR/DksA family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008920284.1
COORDINATES: similar to AA sequence:RefSeq:WP_008920283.1
COORDINATES: similar to AA sequence:RefSeq:WP_007739063.1
COORDINATES: similar to AA sequence:RefSeq:WP_012366903.1
COORDINATES: similar to AA sequence:RefSeq:WP_014901002.1
2-hydroxycarboxylate transporter family protein
dual specificity protein phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006770492.1
COORDINATES: similar to AA sequence:RefSeq:WP_009908260.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741016.1
COORDINATES: similar to AA sequence:RefSeq:WP_014972629.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420431.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493645.1
COORDINATES: similar to AA sequence:RefSeq:WP_012366587.1
COORDINATES: similar to AA sequence:RefSeq:WP_017331299.1
COORDINATES: similar to AA sequence:RefSeq:WP_011548946.1
COORDINATES: similar to AA sequence:RefSeq:WP_005015977.1
COORDINATES: similar to AA sequence:RefSeq:WP_007738499.1
COORDINATES: similar to AA sequence:RefSeq:WP_017231896.1
COORDINATES: similar to AA sequence:RefSeq:WP_011494350.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771020.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771021.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771023.1
COORDINATES: protein motif:HMM:NF020918.2
Members of this family are phasins (small proteins associated with inclusions such as PHA granules). Note that several different families of phasins have been named PhaP despite very little sequence similarity to each other; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009771025.1
COORDINATES: similar to AA sequence:RefSeq:WP_006401448.1
COORDINATES: protein motif:HMM:NF012707.2
COORDINATES: similar to AA sequence:RefSeq:WP_012327613.1
COORDINATES: similar to AA sequence:RefSeq:WP_013591741.1
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: similar to AA sequence:RefSeq:WP_019255245.1
COORDINATES: protein motif:HMM:NF024940.2
COORDINATES: similar to AA sequence:RefSeq:WP_012428249.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013338697.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492105.1
COORDINATES: similar to AA sequence:RefSeq:WP_013590734.1
COORDINATES: similar to AA sequence:RefSeq:WP_013342634.1
COORDINATES: similar to AA sequence:RefSeq:WP_006397821.1
COORDINATES: similar to AA sequence:RefSeq:WP_019938721.1
COORDINATES: similar to AA sequence:RefSeq:WP_008922969.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177378.1
COORDINATES: similar to AA sequence:RefSeq:WP_003275332.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771010.1
COORDINATES: similar to AA sequence:RefSeq:WP_015602204.1
cyclopropane-fatty-acyl-phospholipid synthase
COORDINATES: similar to AA sequence:RefSeq:WP_006404674.1
COORDINATES: similar to AA sequence:RefSeq:WP_018422924.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771006.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771016.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770540.1
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_007749515.1
COORDINATES: similar to AA sequence:RefSeq:WP_007734741.1
COORDINATES: similar to AA sequence:RefSeq:WP_007577963.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427691.1
COORDINATES: similar to AA sequence:RefSeq:WP_011711650.1
COORDINATES: similar to AA sequence:RefSeq:WP_018004567.1
COORDINATES: similar to AA sequence:RefSeq:WP_007734518.1
COORDINATES: similar to AA sequence:RefSeq:WP_006495647.1
COORDINATES: similar to AA sequence:RefSeq:WP_008344992.1
COORDINATES: similar to AA sequence:RefSeq:WP_008344995.1
GO:0047789 - creatininase activity [Evidence IEA]
GO:0046449 - creatinine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013592295.1
GO:0008864 - formyltetrahydrofolate deformylase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006400895.1
COORDINATES: similar to AA sequence:RefSeq:WP_007577911.1
COORDINATES: similar to AA sequence:RefSeq:WP_011354097.1
GO:0008115 - sarcosine oxidase activity [Evidence IEA]
sarcosine oxidase subunit alpha family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007734729.1
COORDINATES: similar to AA sequence:RefSeq:WP_017773687.1
GO:0046653 - tetrahydrofolate metabolic process [Evidence IEA]
sarcosine oxidase subunit beta family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020067486.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0009063 - amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011875458.1
COORDINATES: similar to AA sequence:RefSeq:WP_011875459.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345005.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420589.1
leucine zipper domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007735675.1
COORDINATES: similar to AA sequence:RefSeq:WP_004626834.1
COORDINATES: similar to AA sequence:RefSeq:WP_006413726.1
COORDINATES: similar to AA sequence:RefSeq:WP_018913324.1
COORDINATES: similar to AA sequence:RefSeq:WP_006752310.1
COORDINATES: protein motif:HMM:NF024966.2
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF013044.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013689434.1
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012433166.1
COORDINATES: similar to AA sequence:RefSeq:WP_020656385.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: protein motif:HMM:NF007422.0
bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019936744.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428382.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428380.1
IS66 family transposase zinc-finger binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012406576.1
COORDINATES: similar to AA sequence:RefSeq:WP_012217378.1
COORDINATES: similar to AA sequence:RefSeq:WP_020832173.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024829.2
COORDINATES: similar to AA sequence:RefSeq:WP_011297937.1
COORDINATES: similar to AA sequence:RefSeq:WP_013213800.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880261.1
COORDINATES: protein motif:HMM:NF017727.2
COORDINATES: similar to AA sequence:RefSeq:WP_011880263.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880264.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880265.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404184.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700155.1
COORDINATES: similar to AA sequence:RefSeq:WP_013591877.1
COORDINATES: protein motif:HMM:NF012296.2
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019939885.1
COORDINATES: similar to AA sequence:RefSeq:WP_007583534.1
COORDINATES: similar to AA sequence:RefSeq:WP_017334234.1
COORDINATES: similar to AA sequence:RefSeq:WP_007745182.1
GO:0009325 - nitrate reductase complex [Evidence IEA]
GO:0008940 - nitrate reductase activity [Evidence IEA]
GO:0019645 - anaerobic electron transport chain [Evidence IEA]
respiratory nitrate reductase subunit gamma
COORDINATES: similar to AA sequence:RefSeq:WP_004528384.1
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051131 - chaperone-mediated protein complex assembly [Evidence IEA]
nitrate reductase molybdenum cofactor assembly chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_011205549.1
GO:0009061 - anaerobic respiration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019939891.1
COORDINATES: similar to AA sequence:RefSeq:WP_004191950.1
COORDINATES: similar to AA sequence:RefSeq:WP_018434569.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770943.1
COORDINATES: similar to AA sequence:RefSeq:WP_017775504.1
COORDINATES: similar to AA sequence:RefSeq:WP_011490486.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018310763.1
COORDINATES: similar to AA sequence:RefSeq:WP_017329188.1
COORDINATES: protein motif:HMM:NF016246.2
COORDINATES: similar to AA sequence:RefSeq:WP_011545529.1
succinate dehydrogenase iron-sulfur subunit
COORDINATES: protein motif:HMM:NF012264.2
COORDINATES: similar to AA sequence:RefSeq:WP_016347803.1
GO:0030638 - polyketide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007182754.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880349.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428142.1
COORDINATES: protein motif:HMM:NF024751.2
COORDINATES: similar to AA sequence:RefSeq:WP_018310350.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420717.1
COORDINATES: protein motif:HMM:NF013331.2
COORDINATES: similar to AA sequence:RefSeq:WP_011515952.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094018.1
COORDINATES: similar to AA sequence:RefSeq:WP_007749671.1
COORDINATES: similar to AA sequence:RefSeq:WP_017231851.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007579201.1
COORDINATES: similar to AA sequence:RefSeq:WP_007579204.1
3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007740902.1
COORDINATES: similar to AA sequence:RefSeq:WP_011518249.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007735029.1
COORDINATES: similar to AA sequence:RefSeq:WP_007735028.1
COORDINATES: similar to AA sequence:RefSeq:WP_007735027.1
COORDINATES: protein motif:HMM:TIGR01003.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492889.1
COORDINATES: similar to AA sequence:RefSeq:WP_007178412.1
COORDINATES: similar to AA sequence:RefSeq:WP_007735019.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493364.1
COORDINATES: similar to AA sequence:RefSeq:WP_007735013.1
COORDINATES: similar to AA sequence:RefSeq:WP_007735010.1
COORDINATES: similar to AA sequence:RefSeq:WP_007735008.1
COORDINATES: similar to AA sequence:RefSeq:WP_007735006.1
COORDINATES: similar to AA sequence:RefSeq:WP_012433063.1
COORDINATES: similar to AA sequence:RefSeq:WP_007735002.1
COORDINATES: similar to AA sequence:RefSeq:WP_017334311.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770281.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587547.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420346.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_020066185.1
COORDINATES: similar to AA sequence:RefSeq:WP_007742391.1
COORDINATES: protein motif:HMM:NF019016.2
COORDINATES: similar to AA sequence:RefSeq:WP_007745097.1
COORDINATES: protein motif:HMM:NF012417.2
COORDINATES: similar to AA sequence:RefSeq:WP_004552333.1
COORDINATES: similar to AA sequence:RefSeq:WP_008347142.1
COORDINATES: similar to AA sequence:RefSeq:WP_007581078.1
COORDINATES: similar to AA sequence:RefSeq:WP_007732573.1
GO:0006378 - mRNA polyadenylation [Evidence IEA]; GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009770544.1
COORDINATES: similar to AA sequence:RefSeq:WP_018422115.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049563.1
COORDINATES: similar to AA sequence:RefSeq:WP_007737158.1
COORDINATES: similar to AA sequence:RefSeq:WP_007737151.1
GO:0009267 - cellular response to starvation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007739081.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF012257.2
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018421946.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406433.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771033.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771032.1
COORDINATES: similar to AA sequence:RefSeq:WP_008648470.1
COORDINATES: similar to AA sequence:RefSeq:WP_008648467.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427048.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182738.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427046.1
COORDINATES: similar to AA sequence:RefSeq:WP_007577589.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420275.1
COORDINATES: similar to AA sequence:RefSeq:WP_007579185.1
SET domain-containing protein-lysine N-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006488354.1
COORDINATES: protein motif:HMM:NF021425.2
COORDINATES: similar to AA sequence:RefSeq:WP_018436269.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741007.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741005.1
COORDINATES: similar to AA sequence:RefSeq:WP_011301842.1
COORDINATES: similar to AA sequence:RefSeq:WP_018431726.1
COORDINATES: similar to AA sequence:RefSeq:WP_006479972.1
COORDINATES: similar to AA sequence:RefSeq:WP_009900048.1
LssY C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011661087.1
COORDINATES: protein motif:HMM:NF022391.2
COORDINATES: similar to AA sequence:RefSeq:WP_018417997.1
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010089489.1
COORDINATES: similar to AA sequence:RefSeq:WP_006491868.1
GO:0045275 - respiratory chain complex III [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0008121 - ubiquinol-cytochrome-c reductase activity [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
ubiquinol-cytochrome c reductase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_020070501.1
COORDINATES: similar to AA sequence:RefSeq:WP_018422925.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770320.1
COORDINATES: similar to AA sequence:RefSeq:WP_012251321.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_018422928.1
COORDINATES: similar to AA sequence:RefSeq:WP_018422929.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007730202.1
COORDINATES: similar to AA sequence:RefSeq:WP_010091485.1
peptidoglycan-associated lipoprotein Pal
COORDINATES: similar to AA sequence:RefSeq:WP_013590518.1
COORDINATES: protein motif:HMM:NF012861.2
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013954271.1
COORDINATES: similar to AA sequence:RefSeq:WP_008344714.1
COORDINATES: similar to AA sequence:RefSeq:WP_020700816.1
COORDINATES: similar to AA sequence:RefSeq:WP_086557970.1
COORDINATES: similar to AA sequence:RefSeq:WP_007579165.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770318.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347080.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770328.1
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009770329.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266745.1
polyamine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007581266.1
COORDINATES: similar to AA sequence:RefSeq:WP_007178018.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770294.1
COORDINATES: similar to AA sequence:RefSeq:WP_018424763.1
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013211381.1
COORDINATES: similar to AA sequence:RefSeq:WP_006749647.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093457.1
COORDINATES: similar to AA sequence:RefSeq:WP_013699953.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_012401759.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012401760.1
COORDINATES: similar to AA sequence:RefSeq:WP_012401761.1
COORDINATES: similar to AA sequence:RefSeq:WP_012401762.1
COORDINATES: similar to AA sequence:RefSeq:WP_012401763.1
COORDINATES: similar to AA sequence:RefSeq:WP_012401764.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012401765.1
COORDINATES: similar to AA sequence:RefSeq:WP_018913187.1
COORDINATES: similar to AA sequence:RefSeq:WP_012761813.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_006759512.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253153.1
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: similar to AA sequence:RefSeq:WP_004527735.1
COORDINATES: protein motif:HMM:NF014375.2
COORDINATES: protein motif:HMM:NF025702.2
COORDINATES: similar to AA sequence:RefSeq:WP_020067823.1
COORDINATES: similar to AA sequence:RefSeq:WP_012467857.1
COORDINATES: similar to AA sequence:RefSeq:WP_011870197.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404998.1
COORDINATES: similar to AA sequence:RefSeq:WP_010108377.1
GO:0004359 - glutaminase activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012405387.1
COORDINATES: similar to AA sequence:RefSeq:WP_007731325.1
COORDINATES: similar to AA sequence:RefSeq:WP_009769818.1
COORDINATES: protein motif:HMM:TIGR00398.1
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: protein motif:HMM:NF037161.2
COORDINATES: protein motif:HMM:NF012927.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015004358.1
COORDINATES: similar to AA sequence:RefSeq:WP_011296727.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_086558362.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406119.1
COORDINATES: protein motif:HMM:NF014898.2
COORDINATES: similar to AA sequence:RefSeq:WP_006414539.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006406183.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405249.1
COORDINATES: similar to AA sequence:RefSeq:WP_006494198.1
COORDINATES: similar to AA sequence:RefSeq:WP_006406181.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420598.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_007578720.1
COORDINATES: similar to AA sequence:RefSeq:WP_007578722.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406685.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428289.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406682.1
COORDINATES: similar to AA sequence:RefSeq:WP_012218139.1
COORDINATES: similar to AA sequence:RefSeq:WP_012218138.1
COORDINATES: similar to AA sequence:RefSeq:WP_007739843.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
nucleoside/nucleotide kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007739844.1
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013690931.1
COORDINATES: similar to AA sequence:RefSeq:WP_007739852.1
COORDINATES: similar to AA sequence:RefSeq:WP_007739858.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007739859.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007739860.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013691847.1
COORDINATES: similar to AA sequence:RefSeq:WP_013691848.1
COORDINATES: similar to AA sequence:RefSeq:WP_013954315.1
COORDINATES: similar to AA sequence:RefSeq:WP_011494444.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_013094417.1
COORDINATES: similar to AA sequence:RefSeq:WP_011494442.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770535.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770832.1
COORDINATES: protein motif:HMM:NF016876.2
COORDINATES: similar to AA sequence:RefSeq:WP_009770542.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432928.1
H-NS family nucleoid-associated regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_015002247.1
COORDINATES: similar to AA sequence:RefSeq:WP_017774065.1
COORDINATES: similar to AA sequence:RefSeq:WP_007178336.1
COORDINATES: similar to AA sequence:RefSeq:WP_007246480.1
COORDINATES: similar to AA sequence:RefSeq:WP_011799969.1
COORDINATES: similar to AA sequence:RefSeq:WP_006399272.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007178341.1
COORDINATES: similar to AA sequence:RefSeq:WP_007178342.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014725906.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007178344.1
COORDINATES: similar to AA sequence:RefSeq:WP_007590311.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406673.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF012998.2
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
prephenate dehydratase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006397933.1
filamentous hemagglutinin N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011660360.1
ShlB/FhaC/HecB family hemolysin secretion/activation protein
COORDINATES: similar to AA sequence:RefSeq:WP_007733947.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013592175.1
COORDINATES: protein motif:HMM:NF013954.2
glucosaminidase domain-containing protein
COORDINATES: protein motif:HMM:NF024242.2
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011548560.1
COORDINATES: similar to AA sequence:RefSeq:WP_011548559.1
COORDINATES: similar to AA sequence:RefSeq:WP_012371928.1
COORDINATES: similar to AA sequence:RefSeq:WP_013342584.1
COORDINATES: similar to AA sequence:RefSeq:WP_011548556.1
COORDINATES: similar to AA sequence:RefSeq:WP_014252897.1
COORDINATES: protein motif:HMM:NF024890.2
GO:0005509 - calcium ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018432882.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349869.1
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012428065.1
GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
COORDINATES: protein motif:HMM:NF014200.2
GO:0004185 - serine-type carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012372120.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497835.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006493771.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253169.1
COORDINATES: similar to AA sequence:RefSeq:WP_011053314.1
COORDINATES: similar to AA sequence:RefSeq:WP_007178965.1
COORDINATES: similar to AA sequence:RefSeq:WP_012211009.1