Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
type: Entry
definition: Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
sequence version: NC_011961.1
sequence date: 2023-03-12
sequence: sequence
division: CON
label: NC_011961.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02603430
keyword: RefSeq
source: Thermomicrobium roseum DSM 5159
organism: Thermomicrobium roseum DSM 5159
taxonomy: Bacteria; Thermomicrobiota; Thermomicrobia; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.
reference: 1
references: 19148287
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001276.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/12/2023 11:52:56\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,624\nCDSs (total) :: 2,567\nGenes (coding) :: 2,543\nCDSs (with protein) :: 2,543\nGenes (RNA) :: 57\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 2\nPseudo Genes (total) :: 24\nCDSs (without protein) :: 24\nPseudo Genes (ambiguous residues) :: 0 of 24\nPseudo Genes (frameshifted) :: 4 of 24\nPseudo Genes (incomplete) :: 16 of 24\nPseudo Genes (internal stop) :: 7 of 24\nPseudo Genes (multiple problems) :: 3 of 24\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 917738
topology: circular
so has quality: SO_0000988
location: 1..917738
location: region:1-917738:1
RO_0002162: 309801

NC_011961
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02603430
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum
author: Wu, D.
author: Raymond, J.
author: Wu, M.
author: Chatterji, S.
author: Ren, Q.
author: Graham, J.E.
author: Bryant, D.A.
author: Robb, F.
author: Colman, A.
author: Tallon, L.J.
author: Badger, J.H.
author: Madupu, R.
author: Ward, N.L.
author: Eisen, J.A.
journal: PLoS One 4 (1), e4207 (2009)
pubmed: 19148287

19148287
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Eisen, J.
author: Wu, D.
author: Raymond, J.
author: Wu, M.
author: Chatterji, S.
author: Ren, Q.
author: Graham, J.
author: Bryant, D.
author: Robb, F.
author: Colman, A.
author: Tallon, L.
author: Badger, J.
author: Madupu, R.
author: Ward, N.
journal: Submitted (04-DEC-2008) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917738:1
position: 917738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-917738:1:source
so part of: sequence
organism: Thermomicrobium roseum DSM 5159
mol type: genomic DNA
strain: DSM 5159
culture collection: DSM:5159
type material: type strain of Thermomicrobium roseum
plasmid: unnamed

309801
type: Taxonomy
SIO_000068: taxonomy

TRD_RS09275
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09275
old locus tag: trd_A0001
so part of: sequence
location: 437..2458
location: region:437-2458:1
so has part: feature:437-2458:1:exon
subclass of: SO_0000010

position:437:1
position: 437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2458:1
position: 2458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437-2458:1:exon

TRD_RS09275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09275
old locus tag: trd_A0001
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRARQDGSTVTGPPDRQWGWPSTGQSLVRLLVLGLLVLASCTRPSPQPSPIPDTQPTATTVASEGGPRPSAEPSGTHPPAAPAHPLPGGPPNETLLAFGELLDEEGRLSLETALAVFAGSVAPLPGVVPQQLPGDDAAAVGELAARVLLSNLDRLPPEVAQAVEQAVYGGIEEWIEIPPSGRTGDRLSGTLAGVLAPPSARAQGRADVEHVRALVENVRGRIEERAGRRLRLPLRVGLNPRLGSDTDAVASPVLSGNSRVIACRIAFNPAILANASAEEVTAAHEVWHCFQFDYVGLAGDERSWLVEGQAEWVGAAIATDPSDSARWWNTWLGAPHVSLWRRSYDAIGLYAAAEAAGHDPFEAMLEMFRLRNQEAVSRLFGGRSYEEALQIVAQSLVRSPEFGPEWEASGPGITTARATATLALRPDVPDVEASLDAGPFGSLPLDVSIDPGDRPLVQVTVFGEGSGSVEFPGHGPLRLAPGAGIWFCLRPAECTCPDGSPPRGGADPTLLAEPRGVATVFAPAGGTIGLRVRAVDRDEACSRLVGTWTASVMEILAANLAPYGGVPAGMDCSGDIVMTFRDDGTFERSWQGDCQMSGSHRVRGAGRQTGTYEDLGDELIFRDVRTVVTADFGFSFAVTDDGRATYRIEGDRLAIQFTTPDGAAIVHIYRRAG
SIO_010081: TRD_RS09275
subclass of: SO_0000673
so part of: TRD_RS09275
location: 437..2458
location: region:437-2458:1
so has part: feature:437-2458:1:exon

WP_012642829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437-2458:1:exon

TRD_RS09280
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09280
old locus tag: trd_A0002
so part of: sequence
location: complement(2789..4261)
location: region:2789-4261:-1
so has part: feature:2789-4261:-1:exon
subclass of: SO_0000010

position:2789:-1
position: 2789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4261:-1
position: 4261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2789-4261:-1:exon

TRD_RS09280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09280
old locus tag: trd_A0002
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013915820.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde dehydrogenase family protein
translation: MTSGTVRRYRNYIGGEWVEPASGEYRPDIDPADSRTVLGEFPRSTAEDVDRAVEAAAAAFPAWSSLSGPQRAAILHKAANILEARAREIGEALTREEGKTIGEGVGEVLRGVAILRYFAGEPLRPLGEVYSATNPETFLYTERVPLGVVGIITPWNFPVAIPLWKLAPCLAFGNTAVFKPAELTPLTAHLITEVFVEAGLPPGVLNLVHGPGSVVGEAIARHPKVVAVSFTGSNAVGRHLYQIASERGARVQLELGGKNPVIVAEDADLDFAIELTTSGAFRSTGQKCTATSRVIVLEPLLHEFTTRLVERARSLKVGPGIDPTVYMGPLVSEEQRQRVLGYIEIGEKEGARVLTGGHELAEGDLRYGFFVAPTVFTDVEPGMRIAQEEIFGPVVGIIRARSLDEAIEIANGVPYGLSASIVTRDIRRAFAFARRIQAGVVHINSETAGAEPHVPFGGMKASSSWSREQGRAALEFFTQVKTIYFDLPPA
SIO_010081: TRD_RS09280
subclass of: SO_0000673
so part of: TRD_RS09280
location: complement(2789..4261)
location: region:2789-4261:-1
so has part: feature:2789-4261:-1:exon

WP_012643098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2789-4261:-1:exon

TRD_RS09285
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09285
old locus tag: trd_A0004
so part of: sequence
location: complement(4258..5721)
location: region:4258-5721:-1
so has part: feature:4258-5721:-1:exon
subclass of: SO_0000010

position:4258:-1
position: 4258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5721:-1
position: 5721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4258-5721:-1:exon

TRD_RS09285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09285
old locus tag: trd_A0004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873129.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AI-2E family transporter
translation: MHVLDRVRQSRELLLVTALVALVLGWALLHLAHILTPFIVAAVFAYLVHPLVDWLERRLRLPRIAVVLVLYLVLIGLLVLGGLLLAPSLAQQAQALATTVPRVIETIEQRLARAPELRFGELAIDTRGLLDRLDAAAQSLAERFSREAVPLVLATVEALIKSFVFFLVSFYGLLQGRTLVARLRALAPRRHQKTVSRILGQVDATFRAYIRAQLVLFAIMATATYIALTILEVKYRLALAIATGLLELIPFIGPWTAGAIAVSVALTQGTAPFGWSSLQLAVVVALVYLVLRLLEDHFVIPQLVGHFVRLHPVVVLFGILAGASVAGILGLLLAVPVLAALKIVVLTVLEELRHPPPRQILMLRDRSLLPTLPDWLAAAPARRDVLLIVLPGVVVWDDLPLLQAASRTALDHDVEVLVVTPDPVASSLATAVGLRVVSRLPDGWGADAELLLVLDTSRSAASEWPVPVTSPVGPVRENAAEPKEGVP
SIO_010081: TRD_RS09285
subclass of: SO_0000673
so part of: TRD_RS09285
location: complement(4258..5721)
location: region:4258-5721:-1
so has part: feature:4258-5721:-1:exon

WP_012642390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4258-5721:-1:exon

TRD_RS09290
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09290
old locus tag: trd_A0006
so part of: sequence
location: complement(5959..7323)
location: region:5959-7323:-1
so has part: feature:5959-7323:-1:exon
subclass of: SO_0000010

position:5959:-1
position: 5959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7323:-1
position: 7323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5959-7323:-1:exon

TRD_RS09290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09290
old locus tag: trd_A0006
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MRKETFVRTMSDHDPGGRSVPALEPTVSRPRSSERRRLQQSFFFGVANGGLLLLGDALIHPVLVLTVFVSQLTERGLLVGLVPAMSVSLWFLPQAIAAAFVEGRRRQLPWATWGGIVRALAIAILAAVVLAHGVGPSPTLLTVFFVCYAVYNLAAGFAFVPLVELTARAVPPDRRGFFFSQRNLWGAVLSLAAGFAVQRALVFGEAGFAVLFAASFAALSLAAYTTLWIVERPVPPRPRSFASWVAELPRLLARRPVRRFLVFRSLLALSTIADPFFVVYAQRVLGLPAETVGFYLALSALARILANPLWGWVVQHWGNRQLLQLATLVRVFMPLVALGIQPILGWEHLVPRLDDPQQVVLVTFAFVFVAYGVTLSAQMLANFTAVLELAHPEERPTLVGVTNTILGVVALVPMLGGLVVDRFGYSAVFALALALSLLALLASGLLPASRRQPA
SIO_010081: TRD_RS09290
subclass of: SO_0000673
so part of: TRD_RS09290
location: complement(5959..7323)
location: region:5959-7323:-1
so has part: feature:5959-7323:-1:exon

WP_012642788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5959-7323:-1:exon

TRD_RS09295
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: pdxH
locus tag: TRD_RS09295
old locus tag: trd_A0007
so part of: sequence
location: 7583..8212
location: region:7583-8212:1
so has part: feature:7583-8212:1:exon
subclass of: SO_0000010

position:7583:1
position: 7583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8212:1
position: 8212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7583-8212:1:exon

TRD_RS09295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: pdxH
locus tag: TRD_RS09295
old locus tag: trd_A0007
EC number: 1.4.3.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013704722.1
GO function: GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
GO process: GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxamine 5'-phosphate oxidase
translation: MLQRWEHTDHPLRRRDLADDPLEQFLRWYQEAQGSGLRYPNAMAVATATADGRPSVRMVLLRGVDERGFVFYTNLESRKGRELAENPRAALLFYWEPLERQVRIEGRVELVTSAEADAYFATRPKGSQISAWASRQSEPIDSREALERRHAEFAERFGSGPVPRPAYWGGYRVVPDAYEFWQGRPDRLHDRFRYERSADGIWVITRLQP
SIO_010081: TRD_RS09295
subclass of: SO_0000673
so part of: TRD_RS09295
location: 7583..8212
location: region:7583-8212:1
so has part: feature:7583-8212:1:exon

WP_226980763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7583-8212:1:exon

TRD_RS09300
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09300
old locus tag: trd_A0008
so part of: sequence
location: 8222..8641
location: region:8222-8641:1
so has part: feature:8222-8641:1:exon
subclass of: SO_0000010

position:8222:1
position: 8222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8641:1
position: 8641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8222-8641:1:exon

TRD_RS09300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09300
old locus tag: trd_A0008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020390008.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HIT family protein
translation: MEGCSFCRIVAGELPAARVYEDEKVMAFLDHRPLFFGHTLVIPRQHVPTLAELSGDLLAPLFGLVQRLARAIPLALEAEGTFIGINNRVSQSIPHLHIHVVPRRRGDGLRGFFWPRRRYPSETAMEETAARLRAALQHV
SIO_010081: TRD_RS09300
subclass of: SO_0000673
so part of: TRD_RS09300
location: 8222..8641
location: region:8222-8641:1
so has part: feature:8222-8641:1:exon

WP_012643108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8222-8641:1:exon

TRD_RS09305
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09305
old locus tag: trd_A0009
so part of: sequence
location: 9038..9607
location: region:9038-9607:1
so has part: feature:9038-9607:1:exon
subclass of: SO_0000010

position:9038:1
position: 9038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9607:1
position: 9607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9038-9607:1:exon

TRD_RS09305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09305
old locus tag: trd_A0009
EC number: 3.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018129036.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isochorismatase family cysteine hydrolase
translation: MKAAVLVIDMLNDFVTGKLGNERVRSVIDPLQHLLERARASGVPVVYIGDAHLPSDPEMAVWGPHAMKGTKEAETIPELAPQPGDTVLEKRTYSAFYETGLDLLLRSLGVDTVVITGLHTNICCRHTAADAFTHGYKIIVPEDCVNAFTEEEHREGIAYLRRVYGARITTSEELAREWEREPQTAATKA
SIO_010081: TRD_RS09305
subclass of: SO_0000673
so part of: TRD_RS09305
location: 9038..9607
location: region:9038-9607:1
so has part: feature:9038-9607:1:exon

WP_012643066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9038-9607:1:exon

TRD_RS09315
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09315
old locus tag: trd_A0011
so part of: sequence
location: 10262..11623
location: region:10262-11623:1
so has part: feature:10262-11623:1:exon
subclass of: SO_0000010

position:10262:1
position: 10262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11623:1
position: 11623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10262-11623:1:exon

TRD_RS09315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09315
old locus tag: trd_A0011
EC number: 3.1.1.103
inference: COORDINATES: protein motif:HMM:NF012371.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine hydrolase domain-containing protein
translation: MRTTSDLREVIERACASTGVPGMVIGILTPDGREVVTHGVASLETGCPVRRDTLFQIGSISKVYLATLAMRLVEEGKLTLDTPVASVLPELELADREAQQAITLWHLLTHTSGIEGDRFDDYGYGDDALARYVAGLASARQIHPPGQHWSYCNSGFSLAGRLIEVVTGRSFEAAMRELIFGPLGLERSCFLVQDVLGYPFAVGHRTDEHGHVGVVRDFALPRSVHPAGGVWATIDDLLDFAAFHLGLRPVAAPPISWDSITMMQAPQVAAANWADWYGLGWAIWSIGSVRVIGHGGSTNGYQAHLVLLPEERVAIASLTNHEQGSSAYLEVETWLLTERFGIRPPAPRLCTVSERELQRYAGTYTYPLARLTVRAVTGGLWLEAVQTRGLSREARERPLPPLFLRPIGERVFATGPVRAVPNRVDFIFDGDSEHPRWVRAFGRLAERDAIQEY
SIO_010081: TRD_RS09315
subclass of: SO_0000673
so part of: TRD_RS09315
location: 10262..11623
location: region:10262-11623:1
so has part: feature:10262-11623:1:exon

WP_052294123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10262-11623:1:exon

TRD_RS09320
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09320
old locus tag: trd_A0012
so part of: sequence
location: complement(11747..12526)
location: region:11747-12526:-1
so has part: feature:11747-12526:-1:exon
subclass of: SO_0000010

position:11747:-1
position: 11747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12526:-1
position: 12526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11747-12526:-1:exon

TRD_RS09320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09320
old locus tag: trd_A0012
EC number: 1.1.1.47
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012034029.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose 1-dehydrogenase
translation: MKSERVLLECRVDGKVALVTGASSGLGYTCAVALAEAGADVAVASRSLDRLQEVCRAIEERGRRAFPIAVDVRDVGQIRAMAERVHSVFGRIDILVNSAGLNIPQPALEVTEENWDTILDTNAKGLFFTCQAVGRYMVVQRYGRIVNLGSTMGLVGMADRAAYCASKGAVTQLTKVLAIEWAPYNVTVNAVAPTFVETPLTRPYFERIPGFREEVLRRIPLGRLGLPEEVAAAVVFLASDAAGMITGVTLPVDGGWTAW
SIO_010081: TRD_RS09320
subclass of: SO_0000673
so part of: TRD_RS09320
location: complement(11747..12526)
location: region:11747-12526:-1
so has part: feature:11747-12526:-1:exon

WP_012643227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11747-12526:-1:exon

TRD_RS09325
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09325
old locus tag: trd_A0014
so part of: sequence
location: complement(12942..13826)
location: region:12942-13826:-1
so has part: feature:12942-13826:-1:exon
subclass of: SO_0000010

position:12942:-1
position: 12942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13826:-1
position: 13826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12942-13826:-1:exon

TRD_RS09325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09325
old locus tag: trd_A0014
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011229064.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent oxidoreductase
translation: MDIGFIGLGNMGRGMVQSLLRAGHRVVVWNRTPERADELVALGAERAATPFEAAEVGVVFTMLADDAATEAVVAGPHGILAGLPRDGIHVASSTLSVRYSAELAERHRTRGQHYVAAPVFGRPDAAAQGALRLVIAGQPGAIARLQPAFAALGSQQFVIGERPEHAHAVKIAGNFLILSLVELLSEAFVLADKAGVSRERFFEVASAVFSSPLADRYGRALLEQRFQPPGFRLTLGLKDIRLALELAEATHTPLPIADLVHQHALEAMARGQAELDFTSLLRVVEAHAGLHRPE
SIO_010081: TRD_RS09325
subclass of: SO_0000673
so part of: TRD_RS09325
location: complement(12942..13826)
location: region:12942-13826:-1
so has part: feature:12942-13826:-1:exon

WP_012642535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12942-13826:-1:exon

TRD_RS09330
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09330
old locus tag: trd_A0015
so part of: sequence
location: complement(13981..14613)
location: region:13981-14613:-1
so has part: feature:13981-14613:-1:exon
subclass of: SO_0000010

position:13981:-1
position: 13981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14613:-1
position: 14613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13981-14613:-1:exon

TRD_RS09330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09330
old locus tag: trd_A0015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012876102.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitroreductase
translation: MSETTIQVAEAVLAAIRNRRSVKQVRPDPVPRELIEQLLEAAVWAPNHHLTQPWRFFVLTGEARVALGEVLARDPALTPAKREAIRQKPLRAPVLIAVAVEPDPARPLLDELAAGAAAIQNMLLAAHALGLGAIWRTGRAIEDPAVKEFLGLSDRAVLPGFVYIGYPAALPEPPARRPASTCTEWIDAERAAAARDRLLATLDHSPARHD
SIO_010081: TRD_RS09330
subclass of: SO_0000673
so part of: TRD_RS09330
location: complement(13981..14613)
location: region:13981-14613:-1
so has part: feature:13981-14613:-1:exon

WP_012642630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13981-14613:-1:exon

TRD_RS09340
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09340
old locus tag: trd_A0017
so part of: sequence
location: complement(14959..16476)
location: region:14959-16476:-1
so has part: feature:14959-16476:-1:exon
subclass of: SO_0000010

position:14959:-1
position: 14959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16476:-1
position: 16476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14959-16476:-1:exon

TRD_RS09340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09340
old locus tag: trd_A0017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873178.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YifB family Mg chelatase-like AAA ATPase
translation: MLACVHSSAVVGLEGVLVEVEVDIGPGNPGLTIVGLPDAAVQEARERVRAAIRNSGARFPLSGRITVNLAPADIRKEGPAYDLPIALGILLASGQVSADLTDTVVLGELSLDGTVRHTAGILPMVGIAREHGLRRAIVPAEDAAEAALVEGIEVIPVQSLNELLAHLDGQAPIAPLPPTPIELGDEPLSGIDFAEIKGQEHVKRGLELAAAGGHNVIAVGPPGAGKTLLARALPTILPPLTREEALEVTRIYSVAGLLPSGSPLIRHRPFRAPHHTISFAGMIGGGAWPRPGEVTLAHRGVLFLDELPEFSPRVLEVLRQPLEDRLVTISRASGAVTFPASFLLVAAMNPCPCGYHGDPVRACRCSPHEVARYQKRISGPLLDRIDIHLPVPRVEFDKLADHRTGEPSAAVRARVEAARAVQQLRFGDSRRLNSEMTPAEIRRYCRLDEAGERLLRTAVERLGLSARGYHRVLKLARTIADLAGAERIAAVHVAEALQYRPQEVG
SIO_010081: TRD_RS09340
subclass of: SO_0000673
so part of: TRD_RS09340
location: complement(14959..16476)
location: region:14959-16476:-1
so has part: feature:14959-16476:-1:exon

WP_012643128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14959-16476:-1:exon

TRD_RS09345
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09345
old locus tag: trd_A0018
so part of: sequence
location: complement(16516..16890)
location: region:16516-16890:-1
so has part: feature:16516-16890:-1:exon
subclass of: SO_0000010

position:16516:-1
position: 16516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16890:-1
position: 16890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16516-16890:-1:exon

TRD_RS09345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09345
old locus tag: trd_A0018
EC number: 2.7.7.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006903202.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MRVSWPDLTLPELVARLEQAARALAEELPLRRLVLFGSWVQGRATAASDVDVLVIYADPPRADAFAVAWRVLTAAGLPRVEPHVYTESQAAQLAPTLAAMTRPAIAVYPPPSDRPSPGADQAVE
SIO_010081: TRD_RS09345
subclass of: SO_0000673
so part of: TRD_RS09345
location: complement(16516..16890)
location: region:16516-16890:-1
so has part: feature:16516-16890:-1:exon

WP_012643127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16516-16890:-1:exon

TRD_RS09350
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09350
old locus tag: trd_A0019
so part of: sequence
location: complement(16856..17263)
location: region:16856-17263:-1
so has part: feature:16856-17263:-1:exon
subclass of: SO_0000010

position:16856:-1
position: 16856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17263:-1
position: 17263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16856-17263:-1:exon

TRD_RS09350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09350
old locus tag: trd_A0019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008631431.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HEPN domain-containing protein
translation: MHVERSRDWPERAAGDLALARHAFAGGFFDWTVFAAQQAAEKAVKAALQRLGAEAWGYAVAGLLRALAERLPVPEELIAAALELDKGYIAARNPDAHPAGAPRILYTRAEAERALAHAERILDFCARLVARPDAS
SIO_010081: TRD_RS09350
subclass of: SO_0000673
so part of: TRD_RS09350
location: complement(16856..17263)
location: region:16856-17263:-1
so has part: feature:16856-17263:-1:exon

WP_041437195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16856-17263:-1:exon

TRD_RS09355
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09355
old locus tag: trd_A0020
so part of: sequence
location: 17660..18109
location: region:17660-18109:1
so has part: feature:17660-18109:1:exon
subclass of: SO_0000010

position:17660:1
position: 17660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18109:1
position: 18109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17660-18109:1:exon

TRD_RS09355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09355
old locus tag: trd_A0020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015922381.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20/alpha crystallin family protein
translation: MLERWNPVAEAERMLTEMNRLMSEVFERPLVRARLVAWRPATDVYETGDALVIRLAVPGARPEDLEVTVEQNVVTIRGQYGYRLSEEEAKQATWYRREIASGEFAESITLPVPVNIEDAKATVENGIITLTFPKAEEARVKRIPIQVAR
SIO_010081: TRD_RS09355
subclass of: SO_0000673
so part of: TRD_RS09355
location: 17660..18109
location: region:17660-18109:1
so has part: feature:17660-18109:1:exon

WP_012642607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17660-18109:1:exon

TRD_RS09360
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09360
old locus tag: trd_A0021
so part of: sequence
location: 18141..18812
location: region:18141-18812:1
so has part: feature:18141-18812:1:exon
subclass of: SO_0000010

position:18141:1
position: 18141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18812:1
position: 18812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18141-18812:1:exon

TRD_RS09360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09360
old locus tag: trd_A0021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012520302.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BON domain-containing protein
translation: MARVRTDEEIHQDVLDELDWDPEVDAKDVGVTVHDGVVTLTGTVDSFLKKWAAERAALRVEGVRAVVNHIEVVPRGLGVRTDEDIARAVATALEENPAIPHERIKIRVEEGRVTLEGEVDWHYQRREAEETARRITGVKSVINLITVRQPTVAPEDIKRQIEQAFVRHAEIDAENIQVRVEEGGHVILSGTVRSWAERKEAEEAAWRAPGVTKVTNLIRVQVP
SIO_010081: TRD_RS09360
subclass of: SO_0000673
so part of: TRD_RS09360
location: 18141..18812
location: region:18141-18812:1
so has part: feature:18141-18812:1:exon

WP_012642701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18141-18812:1:exon

TRD_RS09370
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09370
old locus tag: trd_A0023
so part of: sequence
location: 19470..20807
location: region:19470-20807:1
so has part: feature:19470-20807:1:exon
subclass of: SO_0000010

position:19470:1
position: 19470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20807:1
position: 20807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19470-20807:1:exon

TRD_RS09370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09370
old locus tag: trd_A0023
inference: COORDINATES: protein motif:HMM:NF014647.2
GO component: GO:0005886 - plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BMP family ABC transporter substrate-binding protein
translation: MADETRMFGRTLSRRAVLRGVAAGLALPAVSALLAACGGQATPTPAPAPAQTPAAAQTPAAAATPEAKPVTLAILHFSVIEGTTWSGAHDRAGKRLAEKYPNLKYIYREQVGPDQTVPFAEEMIAKEQADIIVGNAEFIGMPLLDIVDKYPDKIFVAVTTSDLTTRPNFIRIFPRQYQSLYLEGLIAAALTKTGNVGIVSAYPNLQVLRRQAGFVLGVQEAAKKLNKDVKVHIKYVGDWYLPAEERAVAETLATQYNCDVLTQQTDSGSTLDVCKARGLWFVGKDMDTVCFYKWATTDTVAISFDTRWEVIYDKIIQAFLKGEKPPEIIFPGMESSITLADGTEVTTTDIMNDCKVGVDAISPKARDLLPKEIIDLVAERREGMRKGTFDPFTEHALVSNGTGLEVEGLPIPPKGTVVKKAGEKPTDEFLLQKINFDLDGVNILP
SIO_010081: TRD_RS09370
subclass of: SO_0000673
so part of: TRD_RS09370
location: 19470..20807
location: region:19470-20807:1
so has part: feature:19470-20807:1:exon

WP_012642730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19470-20807:1:exon

TRD_RS09375
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09375
old locus tag: trd_A0024
so part of: sequence
location: 20921..22456
location: region:20921-22456:1
so has part: feature:20921-22456:1:exon
subclass of: SO_0000010

position:20921:1
position: 20921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22456:1
position: 22456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20921-22456:1:exon

TRD_RS09375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09375
old locus tag: trd_A0024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013683156.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MGGDGAGRIVLEARGITKRFGTVVANDHVDLTIRAGELHAILGENGAGKTTLMRILFGELQPDEGELYLNGQRVHFRSPRDALRQGIGMVHQERKLIPAHTALENIVLGHPKTRPILNLKEAERDVQALCERYGFRIPLHAKVWQLSEGEKQIVEIIKELYHGARILILDEPTSVLSPPEIVKLLESLTKMAKEDLAVIPFITHKLPVVLEYCDRVTILRRGRVVAEMETRQATEQTLASAMVGREVMLQLERVEVPLGEPVVQVQDLWVRDDRGLFAVQGLSFEIRTGEIFGIAGVAGNGQEPLAEALAGLRPVERGSITLSGRDITRAPVLERWRQGLGYIPTERRDVGSIPNFSLVDNVLLNYHFEPEFSQWGVLATGRARALTERILQEYSVVAAGPDAPARSLSGGNLQKVILGRVLSRRPRFLIACLPTHGLDVGAAEFVQQRLLDAKREGMAILLISEDLDEILALSDRIAAIYEGQFTGIVSAREATKELVGELMAGLRRERV
SIO_010081: TRD_RS09375
subclass of: SO_0000673
so part of: TRD_RS09375
location: 20921..22456
location: region:20921-22456:1
so has part: feature:20921-22456:1:exon

WP_012643265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20921-22456:1:exon

TRD_RS09380
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09380
old locus tag: trd_A0025
so part of: sequence
location: 22453..23625
location: region:22453-23625:1
so has part: feature:22453-23625:1:exon
subclass of: SO_0000010

position:22453:1
position: 22453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23625:1
position: 23625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22453-23625:1:exon

TRD_RS09380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09380
old locus tag: trd_A0025
inference: COORDINATES: protein motif:HMM:NF014684.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MRAVIGNYTIRIERRADLRWWHTVVASVLAILVSLFLVGFAFLRAGADPLEVYREIIAYAFVSSFGLPQTINRATFVLLAAFALIVPLRAGLWNIGMPGQLYAATLAAFGVAYAFGAKASVNAQLNGAIVIPLMVIAGLIASGLYGAIAGFLRGRLQVNEIVTTMMLNWAMLWIVAHMIREGGPFMGRTAEGEGFTLPTAIRMPQILGLPLTVYAAVLLALVLTWFLAKTTLGYRIRTFGESPRAAEYAGIDATRISTLVFVLGGMFAGLAGLHYFTGVPGVYKIPKNYGEFADFSFYGLITGLIARNNPIAAIPVAILFGGVSGGARFMQGKLRLAFGIDYALLGVLMIMMVAFQALAQYSVRIERAVTAPARQVGLERGESRVESPRH
SIO_010081: TRD_RS09380
subclass of: SO_0000673
so part of: TRD_RS09380
location: 22453..23625
location: region:22453-23625:1
so has part: feature:22453-23625:1:exon

WP_012643041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22453-23625:1:exon

TRD_RS09385
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09385
old locus tag: trd_A0026
so part of: sequence
location: 23603..24481
location: region:23603-24481:1
so has part: feature:23603-24481:1:exon
subclass of: SO_0000010

position:23603:1
position: 23603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24481:1
position: 24481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23603-24481:1:exon

TRD_RS09385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09385
old locus tag: trd_A0026
inference: COORDINATES: protein motif:HMM:NF014684.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSSLLVISLAAAAVFAIAALGELLEQRAGILNVGLEGVMLLSGTFGFIAAKTSGSYLQGFTIAILTGALVGLLHGFFSITLGSNQVVNGMAIWILGFGLTTYIGYPYTGPLGLKPFPTLGGLPTFFVVALVLAVAIWFLLFKTHLGLKLRSVGENPSVAEASGISVTGMRYLAAALAGMLVGLGGAVYSLVYNPVWSYNYLQGWGFIALALVFFSLWNPFLVVVGAIFFGILWQLSLYPELLFPNIFSRYIWRAMPFIITILVFILLSTRWFRLRWGATKPEALGIAYERQG
SIO_010081: TRD_RS09385
subclass of: SO_0000673
so part of: TRD_RS09385
location: 23603..24481
location: region:23603-24481:1
so has part: feature:23603-24481:1:exon

WP_012642382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23603-24481:1:exon

TRD_RS09390
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09390
old locus tag: trd_A0027
so part of: sequence
location: complement(24608..25285)
location: region:24608-25285:-1
so has part: feature:24608-25285:-1:exon
subclass of: SO_0000010

position:24608:-1
position: 24608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25285:-1
position: 25285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24608-25285:-1:exon

TRD_RS09390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09390
old locus tag: trd_A0027
inference: COORDINATES: protein motif:HMM:NF016250.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthetic protein FliO
translation: MPRLPLLSRLPRQWAVLAFVFLFALLAGLAWSVTRSPGPAAPAPTAPAGEFLARGYAELAEQPTGASPGGSLWDLFAAMLVPTVIVVVAAYATIRVLRSLNRRVAASVSQSQLLELVDTLSLAGSGVIHIVRVGERFLLVGAGHAGLSLLGELRPDEIALLREQRATSPLAQAIVPPFRDLLQSRLPRSWRVLESTPEETRSASPGPEPVQRFGFVPESAESAKQ
SIO_010081: TRD_RS09390
subclass of: SO_0000673
so part of: TRD_RS09390
location: complement(24608..25285)
location: region:24608-25285:-1
so has part: feature:24608-25285:-1:exon

WP_041437201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24608-25285:-1:exon

TRD_RS09395
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: fliN
locus tag: TRD_RS09395
old locus tag: trd_A0028
so part of: sequence
location: complement(25285..25671)
location: region:25285-25671:-1
so has part: feature:25285-25671:-1:exon
subclass of: SO_0000010

position:25671:-1
position: 25671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25285-25671:-1:exon

TRD_RS09395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: fliN
locus tag: TRD_RS09395
old locus tag: trd_A0028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871068.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO function: GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor switch protein FliN
translation: MADRDDTLNRGQEPSSVRPPETPIQEARFVDLRDQPIGNGRQGIDFLRDVEVELTAELGSARMRIKHILGLRPGSVVELDRLAGEPVELTINKTLIARGEVVVVDEKFAVRITEIVSPEKRLAEGGGT
SIO_010081: TRD_RS09395
subclass of: SO_0000673
so part of: TRD_RS09395
location: complement(25285..25671)
location: region:25285-25671:-1
so has part: feature:25285-25671:-1:exon

WP_012642560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25285-25671:-1:exon

TRD_RS14995
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14995
old locus tag: trd_A0029
so part of: sequence
location: complement(25647..26651)
location: region:25647-26651:-1
so has part: feature:25647-26651:-1:exon
subclass of: SO_0000010

position:25647:-1
position: 25647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26651:-1
position: 26651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25647-26651:-1:exon

TRD_RS14995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14995
old locus tag: trd_A0029
inference: COORDINATES: protein motif:HMM:NF014235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FliM/FliN family flagellar motor switch protein
translation: MSLSRTRPTTRAARRERGKPIPYDFRRPDKFSKDHIRSIQSIHEAFDRFASNYLSAQVRSAVHCELGPIEQTTLGDYLDRLPSQVVLCIAELEPLVGRIVLEIDFATASRLVDRMLGGAGEERPPFTATTITEIELLLLRELGNGLFGELAAAWEQVIRLQPQPCEVVLSGQQIQGMMPSEIVLLVQHQVRLFESEGTFTVVLPASTLEPVLPRLNARVLFANPRRATSPQVIADLMAQLEEVSLQLRVELGRARLTVRELLALEPGDVLVLDQDVSFPLAVYVENEPCFYAFPGQRGRSLAIRIAGTLTEDWPRDEELDQEGGTALWPTVTTP
SIO_010081: TRD_RS14995
subclass of: SO_0000673
so part of: TRD_RS14995
location: complement(25647..26651)
location: region:25647-26651:-1
so has part: feature:25647-26651:-1:exon

WP_012643169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25647-26651:-1:exon

TRD_RS09405
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09405
old locus tag: trd_A0030
so part of: sequence
location: complement(26662..27207)
location: region:26662-27207:-1
so has part: feature:26662-27207:-1:exon
subclass of: SO_0000010

position:26662:-1
position: 26662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27207:-1
position: 27207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26662-27207:-1:exon

TRD_RS09405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09405
old locus tag: trd_A0030
inference: COORDINATES: protein motif:HMM:NF015693.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body-associated FliL family protein
translation: MIKRLLSKRLLLLVIPLVLVVAGAGFFLLGGAGAAPFVLNITINQSGDGGKSAAPAEQHLTVSLGERIVNLADPGGYRYLKTEIVVEVAVDQKTYERLTAAGGGGGHGGGGGSTDPLRAELEHSWPKIQDTLTMVLTSKTVDELATLEGKEHLKDELREKLQPAFGDYKITEVYLTQFVIQ
SIO_010081: TRD_RS09405
subclass of: SO_0000673
so part of: TRD_RS09405
location: complement(26662..27207)
location: region:26662-27207:-1
so has part: feature:26662-27207:-1:exon

WP_012642710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26662-27207:-1:exon

TRD_RS09410
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09410
old locus tag: trd_A0031
so part of: sequence
location: complement(27223..27936)
location: region:27223-27936:-1
so has part: feature:27223-27936:-1:exon
subclass of: SO_0000010

position:27223:-1
position: 27223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27936:-1
position: 27936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27223-27936:-1:exon

TRD_RS09410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09410
old locus tag: trd_A0031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor protein MotB
translation: MARRQRHHEGEHENLERWLITYADLITLLLIFFVVMYSISQADLAKFRQVASSLRAAFNLDVLTAPPPGQSMVTPLEQDPRFNAYLSVRAQVASLFTRLGLDRQGAEVELTSEGIVIHLSDAILFPPGQAELRPEAQRVLDGIAAIIEPLPNPIRVEGHTDSTPPPPGSYPDNWELSAMRAVNTVRYLTDVAGLPPQRLSAAGYGEFRPRASNETVEGRRKNRRVDIVIVQPTLGGP
SIO_010081: TRD_RS09410
subclass of: SO_0000673
so part of: TRD_RS09410
location: complement(27223..27936)
location: region:27223-27936:-1
so has part: feature:27223-27936:-1:exon

WP_012642752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27223-27936:-1:exon

TRD_RS09415
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09415
old locus tag: trd_A0032
so part of: sequence
location: complement(27943..28746)
location: region:27943-28746:-1
so has part: feature:27943-28746:-1:exon
subclass of: SO_0000010

position:27943:-1
position: 27943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28746:-1
position: 28746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27943-28746:-1:exon

TRD_RS09415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09415
old locus tag: trd_A0032
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871064.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor protein
translation: MDLATILGIVLGFGALILAFVMEGGHLSSLIGITAYMIIFGGTFGATLTSYGLKDMLGLPKLIMKAIKTPPDRRAVLVEEIVKLAEIARRDGLLALENHPIEDPFLKKGIMLVVDGTDAELTEQILWADVEAMEQRHARGYGIFQTMGGFAPTMGIIGTVMGLVHVLSSLKDPESLGPAIAVAFLATLYGVATANLLWLPLHNKLKLRSKEEVAERQLIIEGILGIQAGENPRMLREKLLVHLPPQARATEPKAAPAGARAMAPGGE
SIO_010081: TRD_RS09415
subclass of: SO_0000673
so part of: TRD_RS09415
location: complement(27943..28746)
location: region:27943-28746:-1
so has part: feature:27943-28746:-1:exon

WP_012642888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27943-28746:-1:exon

TRD_RS09420
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09420
old locus tag: trd_A0033
so part of: sequence
location: complement(28768..28998)
location: region:28768-28998:-1
so has part: feature:28768-28998:-1:exon
subclass of: SO_0000010

position:28768:-1
position: 28768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28998:-1
position: 28998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28768-28998:-1:exon

TRD_RS09420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09420
old locus tag: trd_A0033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871063.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar FlbD family protein
translation: MITVTRLDGSRVVVNAELIEMVEAVPETVIVLVTRRRLMVREPVDEVIDRVLAYRRGLGGQPDAVRGLLPRAEHDD
SIO_010081: TRD_RS09420
subclass of: SO_0000673
so part of: TRD_RS09420
location: complement(28768..28998)
location: region:28768-28998:-1
so has part: feature:28768-28998:-1:exon

WP_012642781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28768-28998:-1:exon

TRD_RS09425
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: fliP
locus tag: TRD_RS09425
old locus tag: trd_A0034
so part of: sequence
location: 29242..30057
location: region:29242-30057:1
so has part: feature:29242-30057:1:exon
subclass of: SO_0000010

position:29242:1
position: 29242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30057:1
position: 30057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29242-30057:1:exon

TRD_RS09425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: fliP
locus tag: TRD_RS09425
old locus tag: trd_A0034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871062.1
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar type III secretion system pore protein FliP
translation: MERTMRDEARLRASEPKGPLRWGALAAGVLGAMASSACAFQATMGSTQIQVQSQGGNSTGNPVAAGLELVFLLTLVSLLPTILIVMTSFTRIVIVLSFVRSAIGVPQLPPNQVLIGLALFLTVFVMAPTWQAVNRDALQPYLRGEINQRTALERGLQPLRTFMFRQTRERDIALFMSLGNLPRPRTPEDVPTWVLVPAFILSELKTAFTMGFVLFIPFLVIDLIVSSTLMAMGMIMVPPVVISLPFKLLLFVMVDGWDLLVRSLVVSFGTG
SIO_010081: TRD_RS09425
subclass of: SO_0000673
so part of: TRD_RS09425
location: 29242..30057
location: region:29242-30057:1
so has part: feature:29242-30057:1:exon

WP_012643151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29242-30057:1:exon

TRD_RS09430
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: fliQ
locus tag: TRD_RS09430
old locus tag: trd_A0035
so part of: sequence
location: 30068..30337
location: region:30068-30337:1
so has part: feature:30068-30337:1:exon
subclass of: SO_0000010

position:30068:1
position: 30068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30337:1
position: 30337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30068-30337:1:exon

TRD_RS09430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: fliQ
locus tag: TRD_RS09430
old locus tag: trd_A0035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012370733.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthesis protein FliQ
translation: MNEALLLELARAAITTTLLVSAPILLTILVVGLLVSVLQAVTQVNEQTLVFIPKIVITFLILLFAGSWMGRQLATLATELFLLLPALRR
SIO_010081: TRD_RS09430
subclass of: SO_0000673
so part of: TRD_RS09430
location: 30068..30337
location: region:30068-30337:1
so has part: feature:30068-30337:1:exon

WP_012642525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30068-30337:1:exon

TRD_RS09435
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: fliR
locus tag: TRD_RS09435
old locus tag: trd_A0036
so part of: sequence
location: 30347..31129
location: region:30347-31129:1
so has part: feature:30347-31129:1:exon
subclass of: SO_0000010

position:30347:1
position: 30347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31129:1
position: 31129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30347-31129:1:exon

TRD_RS09435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: fliR
locus tag: TRD_RS09435
old locus tag: trd_A0036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871060.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthetic protein FliR
translation: MEVTTPLIPSSIALFVLVVTRVGLVLSLLPGFGSQAVPLPARVALAVVLALALVPFVPTDASGLSDPTVFAVALARELVTGLALGLAVAAVFAAVEMAASLIGYQLGFGLAATFNPAFGMQGTALNTLYLALAALVLFGTNGHHQLVGALARSLILLPPGAAAPDVDTPRAVIALTGAMFSDALRIGLPIAGSLLVADIGLGLLNRMVPQMSVFFVGLPAKILLGFLVLLLSLPFLLQILVHVSTDGLLNVLTRVILAAR
SIO_010081: TRD_RS09435
subclass of: SO_0000673
so part of: TRD_RS09435
location: 30347..31129
location: region:30347-31129:1
so has part: feature:30347-31129:1:exon

WP_012642975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30347-31129:1:exon

TRD_RS09440
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: flhB
locus tag: TRD_RS09440
old locus tag: trd_A0037
so part of: sequence
location: 31133..32224
location: region:31133-32224:1
so has part: feature:31133-32224:1:exon
subclass of: SO_0000010

position:31133:1
position: 31133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32224:1
position: 32224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31133-32224:1:exon

TRD_RS09440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: flhB
locus tag: TRD_RS09440
old locus tag: trd_A0037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871059.1
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthesis protein FlhB
translation: MASERTERATPRRRQEARKRGQVPRSADLTSALVLLAGAFFLPWYAGAAGQTLWDYLERAFSGPLPRDLTGPDIVALAWASGATVLKLALPILGLFAAVGVASTLVQAGFVFAPAVLKPDWRRIDPIAGFQRLFSRRGLFETGKALLKIAIVLAVTYPLIQRDLPRYADLTGAEPAAIAQAIGQSMRDLAVRVGAAYLALAILDYGFQRWDLEQRLRMTRHELKEELRQTEGDPEIKARIRRLQRQMAMRRMMAQVPKATVVVTNPTHLAVALRYEPRSMRAPVVVAKGAGAVAERITAIARQHTIPVLRNQPLAQALYRTVEVGQEIPITLYEAVADIIAYVYRLRRASAPVQSETPPTSVS
SIO_010081: TRD_RS09440
subclass of: SO_0000673
so part of: TRD_RS09440
location: 31133..32224
location: region:31133-32224:1
so has part: feature:31133-32224:1:exon

WP_012642432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31133-32224:1:exon

TRD_RS09445
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: flhA
locus tag: TRD_RS09445
old locus tag: trd_A0038
so part of: sequence
location: 32244..34319
location: region:32244-34319:1
so has part: feature:32244-34319:1:exon
subclass of: SO_0000010

position:32244:1
position: 32244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34319:1
position: 34319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32244-34319:1:exon

TRD_RS09445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: flhA
locus tag: TRD_RS09445
old locus tag: trd_A0038
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006692838.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthesis protein FlhA
translation: MASTPTVSGNRAEPVSGIRRLVRYSDVALAAGVVAIVALMILPVPAHVLDILITTNIALALTILLVSLYIHEPLQFSAFPTVLLLATLFRLALNITSTRLILLQGNAGEVINAFGRFVVGGNYVVGIVVFVILVVIQFVVITNGAGRVAEVAARFTLDAMPGKQMSIDADLNAGLITEEEARRRRQEIAREADFYGAMDGASKFVKGDAIAGIVIILINILGGIAIGALQRGLSLGEALRTYALLTVGDGLVSQIPALLISTATGIIVTRSASDANLGLDLARQIFSAPRALAIAGVLLAVLGLAPGLPAPPFFLGAVGMLGAALALRQPARPAAAEIPPPASETEEAMPEVAPVDPLELEIGYGLIPLVDQAAGGQLLRRITLLRKQIAQELGFVMPTVRIRDNLTLRPNEYRILVRGIKAGEGEVYPDRLMAMSTTGEPPQLEGIAAREPAFGLQAVWIAEGQRAAAEAQGYAVVDAASVITTHLSEVVRRHAAQLLRRQDVQRLLDSVRREHPAVVDELVPHLLSLSEVHQVLQRLLEEQVPIRDLVTILEVLGNHARSVRTVHVLAEHVRHALAAAITQQYVAADGTLGALVLHPDLATQLQESIHHGEDGPQLALPPERLQALLSAVAQEMERVAALGYQPVLLAPASLRAALSRTLRRSLPNLAVLAYHEVAPGIRVQILGTVRG
SIO_010081: TRD_RS09445
subclass of: SO_0000673
so part of: TRD_RS09445
location: 32244..34319
location: region:32244-34319:1
so has part: feature:32244-34319:1:exon

WP_012643014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32244-34319:1:exon

TRD_RS09450
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09450
old locus tag: trd_A0039
so part of: sequence
location: 34323..35324
location: region:34323-35324:1
so has part: feature:34323-35324:1:exon
subclass of: SO_0000010

position:34323:1
position: 34323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35324:1
position: 35324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34323-35324:1:exon

TRD_RS09450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09450
old locus tag: trd_A0039
inference: COORDINATES: protein motif:HMM:NF012662.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP-binding signal recognition particle SRP54, G-domain
translation: MLEARTYRAESIQAALLLAKAELGPDAVILDVRHLEPRHLLGGPAVVELVAAPGSPAVQRGPGTPGIPAIPAIGDPVVLGLTALGLSPRFAAELVQAYRQGKGPSRDLRRVLAARIAEYITVAPWLPLGGRMILALVGPTGVGKTTTALKLAAAARTDGFAVQLISCGGDEAHDARSETLARSFGLPFTRAANGVELQRALRMTSGQLVLIDTAGANPFDPRAIAALEGVLASEHVIVALTLSVGGDLEETLEAARRYAPLRPRALILTKLDETRRPGLALGLAERLARPLLALTTGTRIPDDLVSASTPALTELAAWTLERLERRAAVRPPS
SIO_010081: TRD_RS09450
subclass of: SO_0000673
so part of: TRD_RS09450
location: 34323..35324
location: region:34323-35324:1
so has part: feature:34323-35324:1:exon

WP_012643145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34323-35324:1:exon

TRD_RS09455
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09455
old locus tag: trd_A0040
so part of: sequence
location: 35459..35728
location: region:35459-35728:1
so has part: feature:35459-35728:1:exon
subclass of: SO_0000010

position:35459:1
position: 35459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35728:1
position: 35728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35459-35728:1:exon

TRD_RS09455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09455
old locus tag: trd_A0040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQDAKQSKPLTIRPLILLSSIAAFLVVYLGGILRGQSLIWVAVSSASALVLVLIAGLIIERLLASSSEPEEAAAIYERSPARSEQRETS
SIO_010081: TRD_RS09455
subclass of: SO_0000673
so part of: TRD_RS09455
location: 35459..35728
location: region:35459-35728:1
so has part: feature:35459-35728:1:exon

WP_041437204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35459-35728:1:exon

TRD_RS09460
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09460
old locus tag: trd_A0041
so part of: sequence
location: 35746..36534
location: region:35746-36534:1
so has part: feature:35746-36534:1:exon
subclass of: SO_0000010

position:35746:1
position: 35746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36534:1
position: 36534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35746-36534:1:exon

TRD_RS09460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09460
old locus tag: trd_A0041
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871054.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FliA/WhiG family RNA polymerase sigma factor
translation: MAIPARQEGRLRQRLRRIEARDDTRAQLVEQYAPLVKYVVDRLRLSLPPSVERDDLIGYGTIGLLEALDRFDDTRGVKFETYAAMRIRGAILDALRTLDIVPRSARSRARQIEQATREFFAEYGRMPSENELADHLGMTTTELQQAISDAACLFLPLQASEDPDTLTLEEQLADPNALEPGEVAAEEDLKQRIAAALATLSERDRLIVSLYYYEDLTMREISQLLGISESRVSQILNRVRLQLRALLRERGVGLDDLEPGAR
SIO_010081: TRD_RS09460
subclass of: SO_0000673
so part of: TRD_RS09460
location: 35746..36534
location: region:35746-36534:1
so has part: feature:35746-36534:1:exon

WP_012642784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35746-36534:1:exon

TRD_RS09465
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09465
old locus tag: trd_A0042
so part of: sequence
location: 36531..36914
location: region:36531-36914:1
so has part: feature:36531-36914:1:exon
subclass of: SO_0000010

position:36531:1
position: 36531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36914:1
position: 36914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36531-36914:1:exon

TRD_RS09465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09465
old locus tag: trd_A0042
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: transmembrane sensory transduction histidine kinase for metal resistance
translation: MSFGLMEMQVVALIGLLAIASLTAWSSATLWRRQRKLEELVSELAASLGQRSGEGELAPRTDEGEDQLPGLADLVASLKAADRQTVEDLLRTPVDLPRATAIEVDRPTERAARFGFPSRSHPQGWEA
SIO_010081: TRD_RS09465
subclass of: SO_0000673
so part of: TRD_RS09465
location: 36531..36914
location: region:36531-36914:1
so has part: feature:36531-36914:1:exon

WP_143714750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36531-36914:1:exon

TRD_RS09470
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09470
old locus tag: trd_A0043
so part of: sequence
location: 36919..37620
location: region:36919-37620:1
so has part: feature:36919-37620:1:exon
subclass of: SO_0000010

position:36919:1
position: 36919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37620:1
position: 37620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36919-37620:1:exon

TRD_RS09470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09470
old locus tag: trd_A0043
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRWVDGRSVLEEPETILGRERTRVVIEPVLTGWHLLITSLLLAIALWLWVSERLQAEAFPVRVILSYVPTVSTWGPSQATGVALITFSEGDVRADFVDLPVLDGGNRYALWLMRSKTKEAFLLGKFDAKELPVTHVDLLLPDPIPEDGWDMLLVTVEPEPDPDPGPDSRWVLVGALPGTPVELELMPPALPQTGEVRHDGATPPLVLANLMVLILLGLLRPWRPAPAEARRAR
SIO_010081: TRD_RS09470
subclass of: SO_0000673
so part of: TRD_RS09470
location: 36919..37620
location: region:36919-37620:1
so has part: feature:36919-37620:1:exon

WP_012642757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36919-37620:1:exon

TRD_RS09475
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09475
old locus tag: trd_A0044
so part of: sequence
location: 37617..38363
location: region:37617-38363:1
so has part: feature:37617-38363:1:exon
subclass of: SO_0000010

position:37617:1
position: 37617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38363:1
position: 38363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37617-38363:1:exon

TRD_RS09475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09475
old locus tag: trd_A0044
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871051.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-basal body protein
translation: MIRTIYQAAAGMMAQFARQLTLATNLANIETPGYRQQESTIRDFQQMFLLRLGRGEASPIGTLSTAVRWDKPLVDLRQGSLIETGRPLDLALAGRAFFAIQTPDGVEYTRDGRFQLDAQRRLVTADGHPVLGEQGPLVLPAGDIWVEPDGTILVGEQVVGRLLLVEFPPDAQFEPVAGNRYRTDATGAPSETTGVSQGFLEASNVDLTQTLTDMLAATRSYQLAARSLQLADETLRLAVNSVGRVNQG
SIO_010081: TRD_RS09475
subclass of: SO_0000673
so part of: TRD_RS09475
location: 37617..38363
location: region:37617-38363:1
so has part: feature:37617-38363:1:exon

WP_012642403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37617-38363:1:exon

TRD_RS09480
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09480
old locus tag: trd_A0045
so part of: sequence
location: 38375..39154
location: region:38375-39154:1
so has part: feature:38375-39154:1:exon
subclass of: SO_0000010

position:38375:1
position: 38375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39154:1
position: 39154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38375-39154:1:exon

TRD_RS09480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09480
old locus tag: trd_A0045
inference: COORDINATES: protein motif:HMM:TIGR03506.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-basal body protein
translation: MEALYFPAVSGVRAQQVRLDTIAHNLANLETDGFKAARADFTAVPPQEYRVARAGEAPLGPVPIGSGVELSATTRQFTLGPVEVTGDPFDLALAGPDTFVATELPDGTTAFRRSGRLSIDATGRLVFEDGSLLQPPLVLPAGAQLDRIAPDGTVFVRAAGSGDAQPIGRLELVRFPNPQGLLAAGQGRWIATEAAGQPETGAPGEGNWPPVLSGVREHSNVDLVDQMTQLIMAQRAYTANLRSLQTIDELIEIATRLRQ
SIO_010081: TRD_RS09480
subclass of: SO_0000673
so part of: TRD_RS09480
location: 38375..39154
location: region:38375-39154:1
so has part: feature:38375-39154:1:exon

WP_012643216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38375-39154:1:exon

TRD_RS09485
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: flgM
locus tag: TRD_RS09485
old locus tag: trd_A0046
so part of: sequence
location: 39269..39580
location: region:39269-39580:1
so has part: feature:39269-39580:1:exon
subclass of: SO_0000010

position:39269:1
position: 39269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39580:1
position: 39580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39269-39580:1:exon

TRD_RS09485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: flgM
locus tag: TRD_RS09485
old locus tag: trd_A0046
inference: COORDINATES: protein motif:HMM:TIGR03824.1
GO process: GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthesis anti-sigma factor FlgM
translation: MVNQVGHVWHDPSVQRVETPEQQHARQPVTPPSRPDRPQQAAEVAPELQEVQRAIEVVRQAPDVREGRVAAIRKLLEAGKYQVPLAAVADRIAADLRPTLDSE
SIO_010081: TRD_RS09485
subclass of: SO_0000673
so part of: TRD_RS09485
location: 39269..39580
location: region:39269-39580:1
so has part: feature:39269-39580:1:exon

WP_012643113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39269-39580:1:exon

TRD_RS13780
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13780
old locus tag: trd_A0047
so part of: sequence
location: 39596..39991
location: region:39596-39991:1
so has part: feature:39596-39991:1:exon
subclass of: SO_0000010

position:39596:1
position: 39596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39991:1
position: 39991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39596-39991:1:exon

TRD_RS13780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13780
old locus tag: trd_A0047
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKRTPGHGASDDLAAIGELLAALVEALAGGTPEEISALARILESKASSINLPASDAARLAAIATLRTRAALLVETLFATTDCFLSEAIAVQARSQGYRPRAGAWRTVGDLTGEIGIRANGARSGLAELRA
SIO_010081: TRD_RS13780
subclass of: SO_0000673
so part of: TRD_RS13780
location: 39596..39991
location: region:39596-39991:1
so has part: feature:39596-39991:1:exon

WP_012642569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39596-39991:1:exon

TRD_RS09490
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: flgK
locus tag: TRD_RS09490
old locus tag: trd_A0048
so part of: sequence
location: 40061..41467
location: region:40061-41467:1
so has part: feature:40061-41467:1:exon
subclass of: SO_0000010

position:40061:1
position: 40061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41467:1
position: 41467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40061-41467:1:exon

TRD_RS09490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: flgK
locus tag: TRD_RS09490
old locus tag: trd_A0048
inference: COORDINATES: protein motif:HMM:TIGR02492.1
GO component: GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-associated protein FlgK
translation: MVFRALETAFRGLMAQQRVVDTANHNIANANTPGFARQRVSLVPSMPYTVPAFNRSGLAGQVGTGVLVASITRVRESVFDLQYRVQSQALGEASTLVDAYAQIEAVFNEPTEAGLGTLLDRFWRAWQAVGNQPEDLAARAALVQDATTLATNLNRMRRQLTELQADTVTKLTLQVSEVNSIAERLASLNQQIVAALATGQTPNDLMDQRDLLLDKLARFTGATIRPLPNGAVNIYLGGYPLVDQDQWFPLSVQVSGGTASVLWQGTTSPVALERGSLQALLHLHNAVLPGLVQKLEDIRDALANEVNTLHMTGYGLSDLPGPPPGRPFFRITAGGELEVEPSLVADPQLIAAADAPGEPGNNAIARQIAELRSKLVLNSGTATINDFYNTLVAEVGGASQTAQVTRDNQRALVEAIDRQRQEIMAVSLDEEMANLIKYQQAYGAAARAITAVDEMLDRIINGMGLVGR
SIO_010081: TRD_RS09490
subclass of: SO_0000673
so part of: TRD_RS09490
location: 40061..41467
location: region:40061-41467:1
so has part: feature:40061-41467:1:exon

WP_012643143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40061-41467:1:exon

TRD_RS09495
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: flgL
locus tag: TRD_RS09495
old locus tag: trd_A0049
so part of: sequence
location: 41496..42371
location: region:41496-42371:1
so has part: feature:41496-42371:1:exon
subclass of: SO_0000010

position:41496:1
position: 41496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42371:1
position: 42371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41496-42371:1:exon

TRD_RS09495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: flgL
locus tag: TRD_RS09495
old locus tag: trd_A0049
inference: COORDINATES: protein motif:HMM:TIGR02550.1
GO component: GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-associated protein FlgL
translation: MRVTHGMLVDTLLKNLSGNLARMERVYQQITSARRISRPSDDPVGTATVLRLGSAAQEIEQYLANVEQARTWLDLTDQALTTIGQSLQRARELVVQAANDTLSADDRQAIWQELTALQEQIATTGNYAHAGRYLFAGSLTQTEPFDLSTDPPTYRGNSDQLQRLIDRGVTIDINVTGDTAIVPVLTAIKQARDAVAANDPVAIRSQLAAIDAAHTQLLAAQASVGARVNRLEAQRDRLLDAHTSTLRLASEAGDTDMAEAITRFSKEELTYRAALQAGARAIQPTLLDYLR
SIO_010081: TRD_RS09495
subclass of: SO_0000673
so part of: TRD_RS09495
location: 41496..42371
location: region:41496-42371:1
so has part: feature:41496-42371:1:exon

WP_012642392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41496-42371:1:exon

TRD_RS09500
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09500
old locus tag: trd_A0050
so part of: sequence
location: 42392..42820
location: region:42392-42820:1
so has part: feature:42392-42820:1:exon
subclass of: SO_0000010

position:42392:1
position: 42392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42820:1
position: 42820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42392-42820:1:exon

TRD_RS09500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09500
old locus tag: trd_A0050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871045.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar assembly protein FliW
translation: MIERLPETMTARSRQGELIFPNGLIGCPTWRHFAVEEPGDLPGLLLLRSLDEPGIEFVVAPVAELVPDFLEQLAPNDRATLAALGVGISEEVELWVTLSVHDDGTVTANLLGPLVLDFGRGCGTQVVLADSGWGTRHPLVTE
SIO_010081: TRD_RS09500
subclass of: SO_0000673
so part of: TRD_RS09500
location: 42392..42820
location: region:42392-42820:1
so has part: feature:42392-42820:1:exon

WP_012642750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42392-42820:1:exon

TRD_RS09505
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09505
old locus tag: trd_A0051
so part of: sequence
location: 42833..43072
location: region:42833-43072:1
so has part: feature:42833-43072:1:exon
subclass of: SO_0000010

position:42833:1
position: 42833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43072:1
position: 43072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42833-43072:1:exon

TRD_RS09505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09505
old locus tag: trd_A0051
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013076891.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon storage regulator
translation: MLVLTRRTGEAFVIGEGIRVVVLAVEGERVKLGIEAPREVPVVRSELLAVVEAANRQAAGTRTQVLERLKRVFTSTSRS
SIO_010081: TRD_RS09505
subclass of: SO_0000673
so part of: TRD_RS09505
location: 42833..43072
location: region:42833-43072:1
so has part: feature:42833-43072:1:exon

WP_012642729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42833-43072:1:exon

TRD_RS09510
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09510
old locus tag: trd_A0053
so part of: sequence
location: 43482..44153
location: region:43482-44153:1
so has part: feature:43482-44153:1:exon
subclass of: SO_0000010

position:43482:1
position: 43482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44153:1
position: 44153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43482-44153:1:exon

TRD_RS09510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09510
old locus tag: trd_A0053
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicB family antitoxin
translation: MRPWRLLLEEWPKEWVGFVSELPGCSVKGRNRDEVLARAPEAIAMHLAWLDAHDLPRPEGSGPEVRVAEEMAATAQGVGPLFHDDRQPMRLEEIEAVHRVGSAAVADLLALWERASEWERRTRSARQAGWTPSEILRHVAESDRWYAARLSPDVSGMALPDDPAEAIRRADRAFIGVVRAWWSVWGETVVEREGEQWTVRKVLRRRTAHLREHAQQLAQWLGE
SIO_010081: TRD_RS09510
subclass of: SO_0000673
so part of: TRD_RS09510
location: 43482..44153
location: region:43482-44153:1
so has part: feature:43482-44153:1:exon

WP_012643076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43482-44153:1:exon

TRD_RS09515
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09515
old locus tag: trd_A0054
so part of: sequence
location: complement(44232..44720)
location: region:44232-44720:-1
so has part: feature:44232-44720:-1:exon
subclass of: SO_0000010

position:44232:-1
position: 44232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44720:-1
position: 44720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44232-44720:-1:exon

TRD_RS09515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09515
old locus tag: trd_A0054
inference: COORDINATES: protein motif:HMM:NF012514.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUDIX domain-containing protein
translation: MTSQYAHVIAVGGIVRRAGSILLVRQRYGPAQGTYLFPGGLVEPGETLDQAVLREIAEETGIRAIVRGIVGVRTRCDGPRSDTYVMFLLDWSAGEPSPDGQEIDEARFFTLEELRDPDRPITALSRYVALRVLAGSTCLQSFASDFDYAAAGRDPATWRLFC
SIO_010081: TRD_RS09515
subclass of: SO_0000673
so part of: TRD_RS09515
location: complement(44232..44720)
location: region:44232-44720:-1
so has part: feature:44232-44720:-1:exon

WP_012642920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44232-44720:-1:exon

TRD_RS09520
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09520
old locus tag: trd_A0055
so part of: sequence
location: complement(44909..45328)
location: region:44909-45328:-1
so has part: feature:44909-45328:-1:exon
subclass of: SO_0000010

position:44909:-1
position: 44909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45328:-1
position: 45328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44909-45328:-1:exon

TRD_RS09520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09520
old locus tag: trd_A0055
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRLILVLCMVTSLLACSRPAPTLQPTPFADPADEIRAVVTRYLDAVYHGRAGEAWLMHSRATNQGESFDEFAEVVRIAAELGPRIEILQIDPPEIRGDQASVIVVQRLGPRVSTYMFRLVYEDGFWKIHNPRDLVPQP
SIO_010081: TRD_RS09520
subclass of: SO_0000673
so part of: TRD_RS09520
location: complement(44909..45328)
location: region:44909-45328:-1
so has part: feature:44909-45328:-1:exon

WP_012642765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44909-45328:-1:exon

TRD_RS15125
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS15125
old locus tag: trd_A0056
so part of: sequence
location: 45469..46047
location: region:45469-46047:1
so has part: feature:45469-46047:1:exon
subclass of: SO_0000010

position:45469:1
position: 45469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46047:1
position: 46047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45469-46047:1:exon

TRD_RS15125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS15125
old locus tag: trd_A0056
inference: COORDINATES: protein motif:HMM:NF016750.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: twin-arginine translocation signal domain-containing protein
translation: MAATLSRRRFLKVGGAAAGTAVGALAGLGVDLRPKQVRAQQLRIKDAQVYPSVCPYCAVGCGTLVHVVNGQIVNIEGNPKSPVNKGNLCPKGAATYQLHVNPNRLTKVLYRKPYGTQWEVVDLDWAMDRVAELVKKTRDETFVETLPNGKRVMHTTAIFALGGATIDNEWNHIHQKLMRGLGIVRIENQARI
SIO_010081: TRD_RS15125
subclass of: SO_0000673
so part of: TRD_RS15125
location: 45469..46047
location: region:45469-46047:1
so has part: feature:45469-46047:1:exon

WP_012642425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45469-46047:1:exon

TRD_RS09530
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: fdnG
locus tag: TRD_RS09530
old locus tag: trd_A0057
pseudo: true
so part of: sequence
location: <46063..48654
location: region:46063-48654:1
so has part: feature:46063-48654:1:exon
subclass of: SO_0000010

position:46063:1
position: 46063
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:48654:1
position: 48654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46063-48654:1:exon

TRD_RS09530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: fdnG
locus tag: TRD_RS09530
old locus tag: trd_A0057
inference: COORDINATES: protein motif:HMM:TIGR01553.1
GO component: GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO process: GO:0015942 - formate metabolic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: formate dehydrogenase-N subunit alpha
SIO_010081: TRD_RS09530
subclass of: SO_0000673
so part of: TRD_RS09530
location: <46063..48654
location: region:46063-48654:1
so has part: feature:46063-48654:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46063-48654:1:exon

TRD_RS09535
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09535
old locus tag: trd_A0058
so part of: sequence
location: 48725..49540
location: region:48725-49540:1
so has part: feature:48725-49540:1:exon
subclass of: SO_0000010

position:48725:1
position: 48725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49540:1
position: 49540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48725-49540:1:exon

TRD_RS09535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09535
old locus tag: trd_A0058
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012874564.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S dicluster domain-containing protein
translation: MAQAMGFFTDTSVCIGCKACEVACKAWNQLPARNGGKVQLSGQSYDNTVSLSGIQWRHVKFIEQFSPDRSTGRWLMMSDVCKHCVRAACLEACPTGAIIRTEFDTVVIQQDVCNGCRACISACPFGVIEINPETNTAMKCTLCYDRLQAGMVPACAQACPTQSIQFGPIDELKQRAQQRLEQLHAQGVTQARLYGHDESILGGLNSFYLLLDEPETYGLPKNPKLPSTNTPVAAGLSTASAVVLGLLGLVSLRKRRMEELASAAREPESDE
SIO_010081: TRD_RS09535
subclass of: SO_0000673
so part of: TRD_RS09535
location: 48725..49540
location: region:48725-49540:1
so has part: feature:48725-49540:1:exon

WP_012642594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48725-49540:1:exon

TRD_RS09540
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: nrfD
locus tag: TRD_RS09540
old locus tag: trd_A0059
so part of: sequence
location: 49555..50442
location: region:49555-50442:1
so has part: feature:49555-50442:1:exon
subclass of: SO_0000010

position:49555:1
position: 49555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50442:1
position: 50442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49555-50442:1:exon

TRD_RS09540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: nrfD
locus tag: TRD_RS09540
old locus tag: trd_A0059
inference: COORDINATES: protein motif:HMM:NF025940.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysulfide reductase NrfD
translation: MPDTFYSVSPHWGWYAVVEFFVAGLAGTAAGIAALLWLFGRGADRIVARWGFAIATVGSILSGLLLILDLKRPDRFWHMLLFSETFLPTFLKWWSVMALGAWSLFVFGGASFLALVGSLAVEGRLPASLRFLGRGILGTIIVVGSGLAGTFYAGYKGVLLNSTNRPLWGDTAWLGALFFASGMASAAVVLLLLAQRSSPSTVPTLRQLLLGALGVSIVAVVAMLATMPTRVTELTLGNVYGVLLALAVALGMIVPAVVAWRPQLVGRLAVPTLAVLVLAGAFVLRAALLLSSEAV
SIO_010081: TRD_RS09540
subclass of: SO_0000673
so part of: TRD_RS09540
location: 49555..50442
location: region:49555-50442:1
so has part: feature:49555-50442:1:exon

WP_012642726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49555-50442:1:exon

TRD_RS09545
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09545
old locus tag: trd_A0060
so part of: sequence
location: 50444..50692
location: region:50444-50692:1
so has part: feature:50444-50692:1:exon
subclass of: SO_0000010

position:50444:1
position: 50444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50692:1
position: 50692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50444-50692:1:exon

TRD_RS09545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09545
old locus tag: trd_A0060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSSATLRQLSRLAARGLVVLLILVALGACSPEASRTRGGGPGGDIGNRATEVQLHPGGPKIIYYNTPKEGEASQLAGMPVE
SIO_010081: TRD_RS09545
subclass of: SO_0000673
so part of: TRD_RS09545
location: 50444..50692
location: region:50444-50692:1
so has part: feature:50444-50692:1:exon

WP_012642666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50444-50692:1:exon

TRD_RS13785
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13785
old locus tag: trd_A0061
so part of: sequence
location: 50689..51561
location: region:50689-51561:1
so has part: feature:50689-51561:1:exon
subclass of: SO_0000010

position:50689:1
position: 50689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51561:1
position: 51561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50689-51561:1:exon

TRD_RS13785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13785
old locus tag: trd_A0061
inference: COORDINATES: protein motif:HMM:NF016131.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: formate dehydrogenase accessory protein FdhE
translation: MTAVIDKLEQLAERDAVLAPLARSYAATLRLLTSPTGTAIAVFLDPADRLASGAVPLLHGRTIATDLGALRQLAADTTAIFVRSGVPEAGTLLDAVASDRLPLLDLVRATLCADQENLQRLALATQTSNQLVAVLGSVLVIPIAAALVRNSAAASPTRWQAGYCPVCAAWPTLAELRGLERERWLRCGRCGSGWRFPHQECPFCGNSDHRRLGYFAEEGKQDSQRVEVCQACRGYVKTFATLGPWSQGEVLWHDLTTVELDLVAAERDYRRPEGLGYPLAVQIVARELAA
SIO_010081: TRD_RS13785
subclass of: SO_0000673
so part of: TRD_RS13785
location: 50689..51561
location: region:50689-51561:1
so has part: feature:50689-51561:1:exon

WP_012643039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50689-51561:1:exon

TRD_RS09555
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09555
old locus tag: trd_A0062
so part of: sequence
location: 51571..51927
location: region:51571-51927:1
so has part: feature:51571-51927:1:exon
subclass of: SO_0000010

position:51571:1
position: 51571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51927:1
position: 51927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51571-51927:1:exon

TRD_RS09555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09555
old locus tag: trd_A0062
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRPAYDPNALVRPAVFCRALLDALDASAGRRKRRKRDQTPDALGQELKRWILEQAIAADPEPDAFEAWLLDLVLRTPGSGGLRAMCQEVFMEYQLAQHDPDFRAWLALGAPSADKPLS
SIO_010081: TRD_RS09555
subclass of: SO_0000673
so part of: TRD_RS09555
location: 51571..51927
location: region:51571-51927:1
so has part: feature:51571-51927:1:exon

WP_012642853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51571-51927:1:exon

TRD_RS09560
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09560
old locus tag: trd_A0063
so part of: sequence
location: complement(52101..53456)
location: region:52101-53456:-1
so has part: feature:52101-53456:-1:exon
subclass of: SO_0000010

position:52101:-1
position: 52101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53456:-1
position: 53456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52101-53456:-1:exon

TRD_RS09560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09560
old locus tag: trd_A0063
inference: COORDINATES: protein motif:HMM:NF015715.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: permease
translation: MSGAVSPLGAARSQGRVTTFVLSLGLFVAGLAVVLATVVDMRRAFLLEPAVYRKLGAPSAFLQYTPWHLLVLAIALVSAIAAYRVMRGAEQQFGDPSGLRVARNVLAGLLMAMLVVDLFVYRIVQAERVASAGKAGIAKTFALDALPTWLRPIGEAANFLLVVWHATTLGILLGALFLVLLCASPRLQRVYELRGFRAHVLGSASALAYPFCSCCAGPLGASLYRGGASLESSLAFVVAAPLLNVTTLFLATTLLPADFALLRIVGGIALAVFGTWLVALAVRRRPPVLVEAGTAGRGIRWLERLTSFFAFERHLAGRRIDTPTELIAAWLRTTWVIARVAIPMLFIAAAVVGWAAPILTALGGGNTVGTVLFATLVGVLFMIPTWTELAIAAPLIQQGMTGPAAALLLALPAVSLPSVLIYGAALRDWRVPALMVIVVAAVSIVAGLLFL
SIO_010081: TRD_RS09560
subclass of: SO_0000673
so part of: TRD_RS09560
location: complement(52101..53456)
location: region:52101-53456:-1
so has part: feature:52101-53456:-1:exon

WP_041437209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52101-53456:-1:exon

TRD_RS09570
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09570
old locus tag: trd_A0066
so part of: sequence
location: complement(54490..54690)
location: region:54490-54690:-1
so has part: feature:54490-54690:-1:exon
subclass of: SO_0000010

position:54490:-1
position: 54490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54690:-1
position: 54690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54490-54690:-1:exon

TRD_RS09570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09570
old locus tag: trd_A0066
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGEWTGLVFAVGRSNRSFPEFLELLQAHGMRLVIDLRRFPHCLCHPCCDRDHRSSALVAHGLANW
SIO_010081: TRD_RS09570
subclass of: SO_0000673
so part of: TRD_RS09570
location: complement(54490..54690)
location: region:54490-54690:-1
so has part: feature:54490-54690:-1:exon

WP_143714753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54490-54690:-1:exon

TRD_RS09580
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09580
old locus tag: trd_A0068
so part of: sequence
location: complement(56118..56603)
location: region:56118-56603:-1
so has part: feature:56118-56603:-1:exon
subclass of: SO_0000010

position:56118:-1
position: 56118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56603:-1
position: 56603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56118-56603:-1:exon

TRD_RS09580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09580
old locus tag: trd_A0068
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009378939.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (2Fe-2S)-binding protein
translation: MEQAITLLVNGEQRQLRVRCDETLLETLRDRCGLTSVRETCGIGICGACTILVEGKPTSSCLVLSALADGWSITTLEGLTGPDGALHPVQEAFLEKQAFQCSYCTPGMILTTVALLAENPHPTRTEIAQYLAGNLCRCGSYLRILAAVEEAARKVQGSAQG
SIO_010081: TRD_RS09580
subclass of: SO_0000673
so part of: TRD_RS09580
location: complement(56118..56603)
location: region:56118-56603:-1
so has part: feature:56118-56603:-1:exon

WP_012643221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56118-56603:-1:exon

TRD_RS09585
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09585
old locus tag: trd_A0069
so part of: sequence
location: complement(56603..58894)
location: region:56603-58894:-1
so has part: feature:56603-58894:-1:exon
subclass of: SO_0000010

position:58894:-1
position: 58894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56603-58894:-1:exon

TRD_RS09585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09585
old locus tag: trd_A0069
inference: COORDINATES: protein motif:HMM:NF014758.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: xanthine dehydrogenase family protein molybdopterin-binding subunit
translation: MSVGQAVPMIDAVERVTGRLRFSQDVALPGMLHAALVRSTVPHGRIRHIDTRAAWEVPGVVAVVTAADFARIPNLRPVYGPQIEDQPVLAIDRVRYVGDMVALVAAENPHAAREAAARVAVEYEPLPAVFDPIEAMQPGAPLVHELRPEEPHRGHAVYFGLRPLFGTNCCNHFRLSTGDVARGFAEADLVLEETFRTPAAQHVAMEPHAALAVWEDGHLTVWSGTQTPFNTRQILAQLFGIPPERVRIIVPPMGGSFGCKVFPRIEPQVALLAALTGRPVKLVLDRYEEFVTLTRHATVVTIRLGLTRDGRILAKQVQAYWNTGAYADCGPDVARKGGFGSVGPYRIPHVAVDSYCVYTNLPPAGAFRGYAVTEIVWASERMMDIAADALGLDPLEFRLRNLLHDGDQFATGETLHDVHFQECLEAAARAIAWQPEAVVLPKGRVRAKGLAVVMKGMTTPSRSEARVGLDRSGCVTVYSSTVELGQGARTVLAQLAAEPLALPYTAVRVIDPDTDRTPFDNRTTSSRSTYMMGMAVQQAAQRLADRLRQLAADQLEAAPDDLELVPGAVRVRGVPERAISWGELVATSGVEELVEHGEFRNEGGLDETGHGIASSHWHQGAAGAEVEVDLATGQVRVLRLHAAVYAGKVVNALTAALQNEGSMIMGLGSALFEALVYDQGQPLTANLSDYLIPSMLDLPEELTHDLLECPGAEIHGVGETAVPPIPAAIGNAVARATAARLVELPLTPERVLAALRSQREGAS
SIO_010081: TRD_RS09585
subclass of: SO_0000673
so part of: TRD_RS09585
location: complement(56603..58894)
location: region:56603-58894:-1
so has part: feature:56603-58894:-1:exon

WP_012643146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56603-58894:-1:exon

TRD_RS09590
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09590
old locus tag: trd_A0070
so part of: sequence
location: complement(59297..60991)
location: region:59297-60991:-1
so has part: feature:59297-60991:-1:exon
subclass of: SO_0000010

position:59297:-1
position: 59297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60991:-1
position: 60991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59297-60991:-1:exon

TRD_RS09590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09590
old locus tag: trd_A0070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014740377.1
GO function: GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO process: GO:0016310 - phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PEP-utilizing enzyme
translation: MAAQRPEVQLPVTFFGDESFPVEWENEEEKQLFWWWDDLHCPNPLSPMFFELGGWWATCAYLYRRFGAPFGRDWKAKLINGYLFTAVVPRDPKEAAELAPYYSMVMPVYAEKGLEWWQKRLRPEIERNFEYLDTYPYDTATLPELMVLLEDAIDIQERHWRIHWILNLSQFQASLDFQAAVREVIGDVDPTLLERIMVSDSDRNWDAVHGLWELKERVKRNVVLLEAFSKETPAEILAELEKTAEGREFLRWLDEYKREFGHKALYSHEYVYPTWYENPAPIIAAIQGYLQTDYSYPEAIRRLRQDRDAAIQELLSKIPPDDARGRERVEAALHRVLQMMPLTPDHHFYIDQGTFARLRYVLLAIGRRLVEAELLDQPDDVLFLRYHELRVLAAEPSNLPNAKELVRERRAARERAMAVRPRDWVGTASEWALFQEPYKTLWGYPQRFFDSLQPRQVSQRVEGIPASAGVVEGTAFVARTLEDVDALKGGEILVCRMTNPAWVIAFTKIAGLVTDSGGQLSHPAVVSREFGIPAVVGTGVATQVIRTGQRIRVNGSAGVVEILE
SIO_010081: TRD_RS09590
subclass of: SO_0000673
so part of: TRD_RS09590
location: complement(59297..60991)
location: region:59297-60991:-1
so has part: feature:59297-60991:-1:exon

WP_012642537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59297-60991:-1:exon

TRD_RS09595
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09595
old locus tag: trd_A0071
so part of: sequence
location: complement(61025..61321)
location: region:61025-61321:-1
so has part: feature:61025-61321:-1:exon
subclass of: SO_0000010

position:61025:-1
position: 61025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61321:-1
position: 61321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61025-61321:-1:exon

TRD_RS09595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09595
old locus tag: trd_A0071
inference: COORDINATES: protein motif:HMM:NF015925.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antibiotic biosynthesis monooxygenase
translation: MPFVVVAHYYAKEGKADEIAAILKEMVTLSRAEPGCLVYYVNRSQDDPRKFLLYEQYRSREDYEAHKATPYFQEKILNTVVPMLESRVPEFYDLIEPE
SIO_010081: TRD_RS09595
subclass of: SO_0000673
so part of: TRD_RS09595
location: complement(61025..61321)
location: region:61025-61321:-1
so has part: feature:61025-61321:-1:exon

WP_012642414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61025-61321:-1:exon

TRD_RS09600
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09600
old locus tag: trd_A0072
so part of: sequence
location: complement(61352..62341)
location: region:61352-62341:-1
so has part: feature:61352-62341:-1:exon
subclass of: SO_0000010

position:61352:-1
position: 61352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62341:-1
position: 62341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61352-62341:-1:exon

TRD_RS09600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09600
old locus tag: trd_A0072
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006652684.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarylacetoacetate hydrolase family protein
translation: MKLATFAVPSPAGPVRRIGALAEGWLVDLQAAYAAYLARTDPGCEAERLAALLIPDDMVAFLGHGQLGWQAAAQALEEGLRIEEAFGRRTRYQLGEVRLLAPVPRPRVIRDFLTFEGHMRNASRALGRGGEIPPAWYEVPAYYKGDPDTVVGPDADVVMPRYTQQFDFELELGMVIGRRGKDIPVEEAHRYIAGFTIFNDFSARDQQMREAPIGMGPSKGKDFDTGNAIGPYLVTPDELDVTNLRMVARVNGEVWSEGSSRGMHFSFAQLIAHVSQSETIYPGELWGSGTVTNGCGLELGRYLQPGDVVELEVEGIGILRNRVVRAVEG
SIO_010081: TRD_RS09600
subclass of: SO_0000673
so part of: TRD_RS09600
location: complement(61352..62341)
location: region:61352-62341:-1
so has part: feature:61352-62341:-1:exon

WP_012642728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61352-62341:-1:exon

TRD_RS09605
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09605
old locus tag: trd_A0073
so part of: sequence
location: complement(62338..63231)
location: region:62338-63231:-1
so has part: feature:62338-63231:-1:exon
subclass of: SO_0000010

position:62338:-1
position: 62338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63231:-1
position: 63231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62338-63231:-1:exon

TRD_RS09605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09605
old locus tag: trd_A0073
inference: COORDINATES: protein motif:HMM:NF013134.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD binding domain-containing protein
translation: MADCAVIAPATLDEVLSLLAEAGDAATVVAGGVWVTLTLRSGLIQPRWLVRLRRVTPLQELALAGDGSLVIGAGLSHRAVERSPLVRTHWAVLAETLADVANVRVREQATLVGNLCEADPASDPPTVLAALGARLELASVRGRRLVPVADFILDAYQTVREPDELVTAVYVPPLPPGSGAAYLKFRTRSHEDRPALGVAALVVPDAAGRIARLEVVVGAAGNRPQRFPKSLEHAQGHPFEDALLEALADEYARSVETVSDLRASAWYRREMVRVFVARALRRAAQRAGLYPGGSEEA
SIO_010081: TRD_RS09605
subclass of: SO_0000673
so part of: TRD_RS09605
location: complement(62338..63231)
location: region:62338-63231:-1
so has part: feature:62338-63231:-1:exon

WP_012642622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62338-63231:-1:exon

TRD_RS09610
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09610
old locus tag: trd_A0074
so part of: sequence
location: complement(63224..63841)
location: region:63224-63841:-1
so has part: feature:63224-63841:-1:exon
subclass of: SO_0000010

position:63224:-1
position: 63224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63841:-1
position: 63841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63224-63841:-1:exon

TRD_RS09610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09610
old locus tag: trd_A0074
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGDGELLERARSWVAPYWNALHLYRALDWLFLLAPQADLALRLATLTHDMERHFPGPDSPVMDARRGIPDRSYEAQHQERSARIVAAWLEEQGADPTLVRAVRDLVAVHEWGGWPEADLLQAADSLSFLEVNVDRFIAFGLSGERGFTPELVARHFRYMAERIRLPRARELARPLLAAALARLEERTGRAVEATVVARERSCDG
SIO_010081: TRD_RS09610
subclass of: SO_0000673
so part of: TRD_RS09610
location: complement(63224..63841)
location: region:63224-63841:-1
so has part: feature:63224-63841:-1:exon

WP_012642976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63224-63841:-1:exon

TRD_RS09615
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09615
old locus tag: trd_A0075
so part of: sequence
location: complement(63857..64828)
location: region:63857-64828:-1
so has part: feature:63857-64828:-1:exon
subclass of: SO_0000010

position:63857:-1
position: 63857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64828:-1
position: 64828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63857-64828:-1:exon

TRD_RS09615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09615
old locus tag: trd_A0075
inference: COORDINATES: protein motif:HMM:NF013491.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PEP/pyruvate-binding domain-containing protein
translation: MSRAATVALVRWFHDPACTDVHQAGGKGASLARLAAADLPVPPGFVVTSAAFAAFLAENGIDARIRALLQRVDPTERRALEDVAADIQELILTQPLPLELDAAVAGAYAELGHGEAIPVAVRSSAVAEDSQQASFAGQQETFLDVRGVDDVLARIRACWASFFSPRALFYRARKGSLDDLAFAVVVQQLVVPEKAGVLFTVDPVQRRPDVLVVEAVWGFGEALVSGEVTPDHYEIERGSGRLLRCFVPPKTQMLGRGATGGLIALAVPEEQQRLPVLSEAERAALVDLAVRVEAFFGVPQDVEWAIAGGELFVLQSRPITTLA
SIO_010081: TRD_RS09615
subclass of: SO_0000673
so part of: TRD_RS09615
location: complement(63857..64828)
location: region:63857-64828:-1
so has part: feature:63857-64828:-1:exon

WP_012642554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63857-64828:-1:exon

TRD_RS09620
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09620
old locus tag: trd_A0076
so part of: sequence
location: complement(64834..65556)
location: region:64834-65556:-1
so has part: feature:64834-65556:-1:exon
subclass of: SO_0000010

position:64834:-1
position: 64834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65556:-1
position: 65556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64834-65556:-1:exon

TRD_RS09620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09620
old locus tag: trd_A0076
EC number: 3.5.-.-
inference: COORDINATES: protein motif:HMM:NF016115.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cyclase family protein
translation: MGVKLIDLSMPVHNEMMTFPRVPPPKIEMHESWEEFAERIGAAQYGATWLTASYRLELNDHVGTHIDARKHLVAEAPGPEGIPLEYCYADGVLLDFRHKEKGSGITAAEIREALDKIGYRLKPLDIVLIWTGAGAYQNEQRYLTDHCGMTREATLWLIDQGIKVMGIDAITFDPPVWAMFERKQFWEAHLVMREREYYHIENMTNFDQIPRPYGFKVAAFPIKWVGTTAAPVRAVAIVEE
SIO_010081: TRD_RS09620
subclass of: SO_0000673
so part of: TRD_RS09620
location: complement(64834..65556)
location: region:64834-65556:-1
so has part: feature:64834-65556:-1:exon

WP_012643283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64834-65556:-1:exon

TRD_RS09625
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09625
old locus tag: trd_A0077
so part of: sequence
location: complement(65573..66286)
location: region:65573-66286:-1
so has part: feature:65573-66286:-1:exon
subclass of: SO_0000010

position:65573:-1
position: 65573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66286:-1
position: 66286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65573-66286:-1:exon

TRD_RS09625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09625
old locus tag: trd_A0077
inference: COORDINATES: protein motif:HMM:NF019349.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MSQRQITRPDRSLPRPIVRRVLREEIKEYLIDAILRGQLRPGDRIIETRIAQDLGVSQTPVREALRDLELLGFVTSEPFRGTRVRAFTHEELVQIYPIRAAIEGVAARAAATRITTEQLLALEEQIDRMREASELGDEGTAIEADIAFHRIIVEASGNRLLEQFWTSLSLATTTFLTFSIHRRAIEGLAARHEPILEALRARDPDRAEAAMRRHIEEPGRWVYEALSREDPEPQQSS
SIO_010081: TRD_RS09625
subclass of: SO_0000673
so part of: TRD_RS09625
location: complement(65573..66286)
location: region:65573-66286:-1
so has part: feature:65573-66286:-1:exon

WP_012642902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65573-66286:-1:exon

TRD_RS09630
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09630
old locus tag: trd_A0078
so part of: sequence
location: complement(66360..67190)
location: region:66360-67190:-1
so has part: feature:66360-67190:-1:exon
subclass of: SO_0000010

position:66360:-1
position: 66360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67190:-1
position: 67190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66360-67190:-1:exon

TRD_RS09630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09630
old locus tag: trd_A0078
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009201852.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate hydrolase family protein
translation: MTRAEALAKLRQTLAEGRPIIGAGAGTGLSAKCAEAGGADLIIIYNSGRYRMAGRGSLAGLMPYGDANAIVVEMAAEVLPVVRHTPVLAGVCGTDPFRLMPVFLRQLKEMGFVGVQNFPTVGLIDGVFRQNLEETGMGFDLEIEMIRLAHELDMLTAPYVFDPDQARAMAEAGADIIVPHVGLTTKGMIGARTALTLDEAVERVQAMCDAAKSVNPDVIVLCHGGPIAEPEDVAYVLERTRGVVGFFGASSVERLPTERAMVETMQRFKALRPASA
SIO_010081: TRD_RS09630
subclass of: SO_0000673
so part of: TRD_RS09630
location: complement(66360..67190)
location: region:66360-67190:-1
so has part: feature:66360-67190:-1:exon

WP_041437438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66360-67190:-1:exon

TRD_RS14635
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14635
old locus tag: trd_A0079
so part of: sequence
location: complement(67225..68463)
location: region:67225-68463:-1
so has part: feature:67225-68463:-1:exon
subclass of: SO_0000010

position:67225:-1
position: 67225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68463:-1
position: 68463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67225-68463:-1:exon

TRD_RS14635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14635
old locus tag: trd_A0079
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011583028.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tm-1-like ATP-binding domain-containing protein
translation: MPTVVLIGTLDTKGVEYEFLRQRLRERGCEVLLIDAGVLGAPQAAPDISREEVARAAGADVAELAARGDRGAAIATMARGATAIVLDLYRAGRLHGILALGGSGGSSLATTAMRALPIGVPKLMVSTLASGDTRPYVGASDIAMLYPVVDIAGINRISERILTNAAAAIAGMAQAYETFRPSAPSKPLIGATMFGVTTPCVTEARKELEGRGYEVLVFHATGTGGQAMENLVKGGFLAGVLDITTTELADELVGGVLSAGPERLEAAGAMGIPQVVSLGALDMVNFGPLETVPERFRHRRLYQHNPTVTLMRTTREECAELGRIIARKLNAAKGPVAVFIPKRGFSAIDVEGKPFYDPEADQALIEALEANLAPHIEVHEWDTDINDPAFARAMAARLDELIRAQQPAEAAS
SIO_010081: TRD_RS14635
subclass of: SO_0000673
so part of: TRD_RS14635
location: complement(67225..68463)
location: region:67225-68463:-1
so has part: feature:67225-68463:-1:exon

WP_012642670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67225-68463:-1:exon

TRD_RS14640
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14640
old locus tag: trd_A0080
so part of: sequence
location: complement(68476..69210)
location: region:68476-69210:-1
so has part: feature:68476-69210:-1:exon
subclass of: SO_0000010

position:68476:-1
position: 68476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69210:-1
position: 69210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68476-69210:-1:exon

TRD_RS14640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14640
old locus tag: trd_A0080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018391585.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MPDEPLLSIRDLHAYYGQSHVLQGVELTVGQEPLALLGRNGMGKTTLCLAVTGLLPTVRGSIRFAGQELVGKPPHRIAALGIAYVPQGRRIFPSLTVEEHLRLVPRRRRADGGEPWTEERIYTLFPRLAERRRQPAGTLSGGEQQMLAIARALLTNPRLLIMDEPSEGLAPVIVEQLVTTLRHLAQDGLAILLVEQRLAVATAVASRIAIMLSGRIVWETSAAELLGDPERQQRYLGVSAWQAA
SIO_010081: TRD_RS14640
subclass of: SO_0000673
so part of: TRD_RS14640
location: complement(68476..69210)
location: region:68476-69210:-1
so has part: feature:68476-69210:-1:exon

WP_012642801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68476-69210:-1:exon

TRD_RS09645
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09645
old locus tag: trd_A0081
so part of: sequence
location: complement(69203..69982)
location: region:69203-69982:-1
so has part: feature:69203-69982:-1:exon
subclass of: SO_0000010

position:69203:-1
position: 69203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69982:-1
position: 69982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69203-69982:-1:exon

TRD_RS09645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09645
old locus tag: trd_A0081
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009028480.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MVAIELHRPHTAAHALELQGVSRRFGGLVAVRDVSFALEPGERRAIIGPNGAGKTTLFNLITGDLRPTNGTIRFFGRDVTTLPPYQRIRLGLARTYQTPLVFPRLSVAENLYLALRGVRPWRLSVRLPRRTDPEFQEVAALAEQVGLSHALRALAGALSHGEQRQLELGMALASRPRLLLLDEPAAGLSPGEREHLTTLLLALDPGMTVLLIEHDMDVAFQVAQRVTVLHEGSVIAEGTPEEIAANPIVQQVYLGGGYA
SIO_010081: TRD_RS09645
subclass of: SO_0000673
so part of: TRD_RS09645
location: complement(69203..69982)
location: region:69203-69982:-1
so has part: feature:69203-69982:-1:exon

WP_012643181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69203-69982:-1:exon

TRD_RS09650
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09650
old locus tag: trd_A0082
so part of: sequence
location: complement(69986..71413)
location: region:69986-71413:-1
so has part: feature:69986-71413:-1:exon
subclass of: SO_0000010

position:69986:-1
position: 69986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71413:-1
position: 71413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69986-71413:-1:exon

TRD_RS09650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09650
old locus tag: trd_A0082
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009804050.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MNGQPARFSRRTLLRRAGFVGLAATASALLAACAGQQATPTPAPPAATPPPAPAPSPTPPAPTPAAAASPAVTVGPAAGEIVIGILATLEGAFALYGEEAVRGVELAVAEFGGEIAGKKIRLVKESTDATPQVAREKARKLIEQDKVDCIVGPLSGDEGLALRDYAKTIPDKTIVNGTSAAQDTTLRDPAPNFFRFSTDGVQWMAGLGTYCYEVKGYRRVATLGEDYSYPYSQVAGFLLEFCRLGGDCVAQFWVPIGTKDYSSVISSMPSDIDAIYVILGGSDAVNFLKAYSEFGGKAALIGGSSTIDQNVLETKGALRSRVIGIPGAMPVAADNPDPAWKAWVEQYRKQFPQGLSTPSLFCWGYYVNAKGLLLGLKAVNGDLSDGQKKLQAALAKVEFDGPTGHIKLDKNRQAIANNFVTEVAEGPDGNLYNKLVKVVEGVNQTLGLPEDKYLSLGSFTRDNPTCEKIKKTFGS
SIO_010081: TRD_RS09650
subclass of: SO_0000673
so part of: TRD_RS09650
location: complement(69986..71413)
location: region:69986-71413:-1
so has part: feature:69986-71413:-1:exon

WP_012642397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69986-71413:-1:exon

TRD_RS09655
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09655
old locus tag: trd_A0083
so part of: sequence
location: complement(71481..72461)
location: region:71481-72461:-1
so has part: feature:71481-72461:-1:exon
subclass of: SO_0000010

position:71481:-1
position: 71481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72461:-1
position: 72461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71481-72461:-1:exon

TRD_RS09655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09655
old locus tag: trd_A0083
inference: COORDINATES: protein motif:HMM:NF014684.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter permease
translation: MSPRAVVAALIVLALLSFPAWGSPYFVGRIFTPAFIFGVIALSLCLLAGYGGMVSLAQMTLAGLAGYGYGHLTVMQGQPWWVGILGGIVLATVVAFLFGLIAVRSSGIYFLMITLALGMVVYALANQNRSFFGGHTGILGIRPPELFGHALTERVPFYYLCLVVGLATYALVRYLARTPFGLALVALRDNPRRLAALGFHVALHRVAAFTLAGFLAGVGGLLLVWYNGAISPTTIDLTRLINIMVIAVIGGLMYAEGAFLGALVFVLVTNFASSFTQRFNTVIGLVFLATVLFSPEGLSGLGLRALAALQRILRVRFASAERAEMQ
SIO_010081: TRD_RS09655
subclass of: SO_0000673
so part of: TRD_RS09655
location: complement(71481..72461)
location: region:71481-72461:-1
so has part: feature:71481-72461:-1:exon

WP_012642924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71481-72461:-1:exon

TRD_RS09660
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09660
old locus tag: trd_A0084
so part of: sequence
location: complement(72458..73327)
location: region:72458-73327:-1
so has part: feature:72458-73327:-1:exon
subclass of: SO_0000010

position:72458:-1
position: 72458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73327:-1
position: 73327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72458-73327:-1:exon

TRD_RS09660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09660
old locus tag: trd_A0084
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018391589.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter permease
translation: MTWPQFVTVTLNGLTLAALYFVVAIGFTLIFGVLRVVNLAHGSLYLFGGYVGWSVADRSGSWLLGALAAFLVAGLAGLVLELGLLRPLHGQDLREALVTIGVSIIAADLMLAKWGGFTYDFSPPEAITGGVRIPVLGIGYPKYRLFVLAFALALGVVLWMVLTRTRLGITVRAAIDDRDMVAAVGIDVQRVFAAMFAIGAGLAGLAGVVGGSVLSISSGEDARYLLASLIVVIVGGMGSLPGTAVAAILVALVEQYSLALFPTYAAIVSFLLMVLVLAVRPQGLFGRPA
SIO_010081: TRD_RS09660
subclass of: SO_0000673
so part of: TRD_RS09660
location: complement(72458..73327)
location: region:72458-73327:-1
so has part: feature:72458-73327:-1:exon

WP_012643241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72458-73327:-1:exon

TRD_RS09665
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09665
old locus tag: trd_A0086
so part of: sequence
location: 73787..74176
location: region:73787-74176:1
so has part: feature:73787-74176:1:exon
subclass of: SO_0000010

position:73787:1
position: 73787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74176:1
position: 74176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73787-74176:1:exon

TRD_RS09665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09665
old locus tag: trd_A0086
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011957591.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VOC family protein
translation: MVALRRIQHVSITAPLDGAERARAFYNGVLGLREKPVPETLAGLNILLWFDVGPSELHIVAEDDETRGRSRRHVCFEVDDLAAVRARLSEAGYQPYDAAPIPGRPRFFCRDPFGNLLEFMVFAEEGSER
SIO_010081: TRD_RS09665
subclass of: SO_0000673
so part of: TRD_RS09665
location: 73787..74176
location: region:73787-74176:1
so has part: feature:73787-74176:1:exon

WP_012642836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73787-74176:1:exon

TRD_RS09670
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09670
old locus tag: trd_A0087
so part of: sequence
location: 74387..75178
location: region:74387-75178:1
so has part: feature:74387-75178:1:exon
subclass of: SO_0000010

position:74387:1
position: 74387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75178:1
position: 75178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74387-75178:1:exon

TRD_RS09670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09670
old locus tag: trd_A0087
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008476827.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MDLGLRGKVAMVAAASQGLGKAVALGFAREGANLAICSRNRAALEAVAEEARAHGVDVLAIPADVTRAEDITAFVERTVAHFGGVDILVTNAGGPPAGTFQDFPDDAPWQAAFELTLLSAVRLIRGVLPSMRARGGGSIVVMTSSSIKVPIPNLILSNVFRAGVAALAKTLAEEFAPYNIRVNNVLPGRIATERLLYLDRVTAERLGVDPETVRQRVIATIPLGRYGDPEEFANAVVFLASERASYITGASLQVDGGYIKCIY
SIO_010081: TRD_RS09670
subclass of: SO_0000673
so part of: TRD_RS09670
location: 74387..75178
location: region:74387-75178:1
so has part: feature:74387-75178:1:exon

WP_012642533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74387-75178:1:exon

TRD_RS09675
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09675
old locus tag: trd_A0089
so part of: sequence
location: complement(75647..78358)
location: region:75647-78358:-1
so has part: feature:75647-78358:-1:exon
subclass of: SO_0000010

position:75647:-1
position: 75647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78358:-1
position: 78358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75647-78358:-1:exon

TRD_RS09675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09675
old locus tag: trd_A0089
inference: COORDINATES: protein motif:HMM:NF014420.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MQSDPHSLADGCQLTDPDSVPSAVRAERFTYRYPSLESTDPAGPALEDLSFVIPAGQLVGLVGASGSGLTTLCRALAGIVPHETGGVVRGWLEVAGSETTSVSPAELAERVGIVFEDPEANLIGLSVAEEVAFALELRGDPPEEVARRVDWALAVVGLAALRDRPVNQLSGGQKQRLAIAVALARQPALLVLDQPAAQLDPLGKQEIQRALAELAAQPEYRLTIVLAERDADFLLPLVERLLGLASGRLALDAPANVAFADPDRLGEFGIDPPQLALLAVALAPVLGSTPLPVFRTVEDARAFLARVVPASSPHHELLTQATRDATRLTARSAAEPSRAALDASAEPVLQLERVSFRYAGGPLVLQDIDLTVAPGEIVALVGPNGSGKTTLARHVIGALRPERGRVLVAGQDTRTLSIGELARFVGYVAQNPDHQLVRTTPRDEVAFALRTLGSAPAAVAARTAVVLEQCGLALVADRPHWILSRSQRQLAALAAALARQPRLLVLDEPTSALDRAGRDRLARLLAERAANGQSTLVVSHDLRFVARCAHRVVLLSGGRVWASGTPRAVLGDAELLARAGLVPLPVTALAHVLGLPPALEPAELVAALEHAGNHAPARTAQGSVEPPAVGTEGPMTEASPERATGAPPFLARIDPRVKLALALGLALPVLLWQSPLLLLAMTGFLHLVLWRAGGFDRARSLAVWRALAPLLVLVLLLRPLFDRSGAPILLEVGPLVITLPGLLGAVGAALRVVALALLALAWFATTNERAFVQSLVRLGLPLSVGLALAIGLRFIPVFAQTFWTAAEALQTRGWIIPERGMARLRALLPVLSVALAATLRQAQQLSWALAARGVGRRGNRPHFADLRMRALDWSVLVTGAALAAALLVAALAGVGRSPLWPLA
SIO_010081: TRD_RS09675
subclass of: SO_0000673
so part of: TRD_RS09675
location: complement(75647..78358)
location: region:75647-78358:-1
so has part: feature:75647-78358:-1:exon

WP_012642778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75647-78358:-1:exon

TRD_RS09680
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09680
old locus tag: trd_A0090
so part of: sequence
location: complement(78420..78977)
location: region:78420-78977:-1
so has part: feature:78420-78977:-1:exon
subclass of: SO_0000010

position:78420:-1
position: 78420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78977:-1
position: 78977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78420-78977:-1:exon

TRD_RS09680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09680
old locus tag: trd_A0090
inference: COORDINATES: protein motif:HMM:NF018816.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ECF transporter S component
translation: MDRPRMEQRRFEVSPLIIALAGVMIAVVFVATRFIQVPIPSGYIHLGDIAIYTGAFLFGPIVGGVSGALGPMLADLTSGYGQYAPATLVLHGLQGFLAGWIGWRAGFWRMVLATILGGVIIVAGYFLWEIAVLRIGLVTATANLPFNIWQVTTGAIGGIALTVFFRRTYAVVLTQLRPARFRREA
SIO_010081: TRD_RS09680
subclass of: SO_0000673
so part of: TRD_RS09680
location: complement(78420..78977)
location: region:78420-78977:-1
so has part: feature:78420-78977:-1:exon

WP_012642690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78420-78977:-1:exon

TRD_RS09685
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: ccmA
locus tag: TRD_RS09685
old locus tag: trd_A0091
so part of: sequence
location: 79167..80162
location: region:79167-80162:1
so has part: feature:79167-80162:1:exon
subclass of: SO_0000010

position:79167:1
position: 79167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80162:1
position: 80162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79167-80162:1:exon

TRD_RS09685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: ccmA
locus tag: TRD_RS09685
old locus tag: trd_A0091
EC number: 7.6.2.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014431467.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO function: GO:0015439 - ABC-type heme transporter activity [Evidence IEA]
GO process: GO:0015886 - heme transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heme ABC exporter ATP-binding protein CcmA
translation: MRIARRGRRAIGRQQAAREDRPIIVVSRLERRFGEVIALAGIDFTVAAGEVVGLLGHNGAGKTTTLRLLLGLLAPHGGTIRVFGMEPVVAGEAIRARTGVVGEQVGLDERLTAREILTFFADLYDVPPAVQRQRIPLLLEQFGLADVADRRVATFSAGMRQRLALARCLLHDPELLLLDEPTTALDPVAAHQVRELIAERRREGRTILLATHNLDEAERLCDRVIILERGRVLVEGPPRELAAALGVPAQLSLEVDPERGAEALALLERSGAAARLEPEPGRLTVERVTRRQVPELVAVLVTGGIAVYGVSLRTPSLEDVYLALHQRAERR
SIO_010081: TRD_RS09685
subclass of: SO_0000673
so part of: TRD_RS09685
location: 79167..80162
location: region:79167-80162:1
so has part: feature:79167-80162:1:exon

WP_012643065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79167-80162:1:exon

TRD_RS09690
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09690
so part of: sequence
location: 80166..80978
location: region:80166-80978:1
so has part: feature:80166-80978:1:exon
subclass of: SO_0000010

position:80166:1
position: 80166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80978:1
position: 80978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80166-80978:1:exon

TRD_RS09690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09690
inference: COORDINATES: protein motif:HMM:NF013245.2
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MHWRRILAIVRKDLAAVRRSRTVLLPLVLVPLVFFVLMPVAIGLLARFLPIDESDAQDLERLLRALPAAERERFQALNPGQQLAVIFFSYQFAPLILIVPLATTMVIAADGIAGERERRTLEALLVTPVRDEELFLGKVLAAALPASLVDWIGATIAALLAIAVSGIGPPLLPSLSWLILAYLGGPGVAVFGLSIVVLISSRVRGMQEVSQLSGLVAIPLIGLIVAQGSGLFLLDWRLALAGSLVIWGIAALLLRVGRRSFQREALLRLG
SIO_010081: TRD_RS09690
subclass of: SO_0000673
so part of: TRD_RS09690
location: 80166..80978
location: region:80166-80978:1
so has part: feature:80166-80978:1:exon

WP_041437212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80166-80978:1:exon

TRD_RS09695
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09695
old locus tag: trd_A0092
so part of: sequence
location: complement(80919..82190)
location: region:80919-82190:-1
so has part: feature:80919-82190:-1:exon
subclass of: SO_0000010

position:80919:-1
position: 80919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82190:-1
position: 82190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80919-82190:-1:exon

TRD_RS09695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09695
old locus tag: trd_A0092
inference: COORDINATES: protein motif:HMM:NF019310.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MHRHQRDKGYAWVIVATLALTETVSWGVLYYGFAVFLVPMEQAFGWSRAQLTGAFSLALLLSGFVAPLVGRWLDQRGPRLPMTFGSLAATLLLLAWSRITQLAAFYAVWAGLGLVMALVLYEPAFATIAKWFERRRRQALTVLTLVGALASVIFTPFITWLIALLGWRTALLVLAGLLALTTVLPHALLLRAPPREPISPRPRAATNARAALRTLPFWALTAALTLAAFVTVTVTVHLLPSLLDRGYTPAFAASATGLVGLMQIPGRLLIAPLGRWLSDRVLTTLVFLVQGGALLLLLVAGHRAAGVLAFVVLFGMANGMITIVRAARPAELFGSAAYGAIAGAMTLPVTLARAAAPFGAGLLYTALGRYQPIWLALVVVGALSAGAACLAETAACRSLLGSARSPQTEERLPLERASTDAQE
SIO_010081: TRD_RS09695
subclass of: SO_0000673
so part of: TRD_RS09695
location: complement(80919..82190)
location: region:80919-82190:-1
so has part: feature:80919-82190:-1:exon

WP_012642687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80919-82190:-1:exon

TRD_RS09700
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09700
old locus tag: trd_A0094
so part of: sequence
location: complement(82374..82814)
location: region:82374-82814:-1
so has part: feature:82374-82814:-1:exon
subclass of: SO_0000010

position:82374:-1
position: 82374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82814:-1
position: 82814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82374-82814:-1:exon

TRD_RS09700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09700
old locus tag: trd_A0094
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014432553.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1801 domain-containing protein
translation: MSDEQMNGPADARQPDRRKQRRTMRRSGAVDGEEAVRAAITAMPEPWRSIAERLDFVIRSTAPQLTPRLWYGLPAYALEKAVVCFFRSPQTFGERYLTFGFTDKAQLDEGTWWPVAFAITELGPAEEARVRELVQRAVGATDREPR
SIO_010081: TRD_RS09700
subclass of: SO_0000673
so part of: TRD_RS09700
location: complement(82374..82814)
location: region:82374-82814:-1
so has part: feature:82374-82814:-1:exon

WP_012642932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82374-82814:-1:exon

TRD_RS09705
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09705
old locus tag: trd_A0097
so part of: sequence
location: 83368..85086
location: region:83368-85086:1
so has part: feature:83368-85086:1:exon
subclass of: SO_0000010

position:83368:1
position: 83368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85086:1
position: 85086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83368-85086:1:exon

TRD_RS09705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09705
old locus tag: trd_A0097
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871956.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: long-chain fatty acid--CoA ligase
translation: MNKSTRSAACAEFPERVDHSFREGFAGEEHWYTDRAGGKRGMNLDTLTIRHVLVRTHRYFPRSEVVERVGEGQVRRFCYAELAEEAIRFANGLRSLGVREGDRVATLLWNTWPHLVAYLAIPNIGAVIHTLNLRLHPNDLAYIAHHAEDKVLIVEDSLVPLYEQFRDHAPFQQVIVVGDATKVPGALSYAELIQQHEPDERALVDVHWNTPAFLLYTSGTTGKPKGVLYVHAQLALAALALTSTITYYVSKEDSIVLSVPMFHVASWALPYAGLIVGAKLVLPGPHPQPADLLNLLSDEQGTFVAGVPTVWHDAANLVENYPGRWTFSPKLRLILGGSAAPEALIRRWESFGVTVIHGWGMSEVLLGLQSHVKLADFPPEKRYELLLKQGMPSPFVEAKVLTFDGAEAPWDGQTMGELLVRGAWIADSYYRGESPDSFVDGWLRTGDVAVIDQEGYVKLVDRLKDVIKSGGEWISTIELENALMSHPAVEEAAVIGVPHERWQERPIGVVVLRRGQSTTEEELKEYLRQRFVRWWVPDAIVFVDELPKTSTGKLAKATLRERFRDWKWEERA
SIO_010081: TRD_RS09705
subclass of: SO_0000673
so part of: TRD_RS09705
location: 83368..85086
location: region:83368-85086:1
so has part: feature:83368-85086:1:exon

WP_012642483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83368-85086:1:exon

TRD_RS09710
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09710
old locus tag: trd_A0098
so part of: sequence
location: 85083..87296
location: region:85083-87296:1
so has part: feature:85083-87296:1:exon
subclass of: SO_0000010

position:85083:1
position: 85083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87296:1
position: 87296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85083-87296:1:exon

TRD_RS09710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09710
old locus tag: trd_A0098
inference: COORDINATES: protein motif:HMM:NF014757.2
GO function: GO:0070403 - NAD+ binding [Evidence IEA]
GO process: GO:0006631 - fatty acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
translation: MIEKVGVLGAGSMGAAVAALAASAGLEVILLDVKGEGDPAGPARRGLERAVKQRAFLDPSAAGRVQVGNVEDDLPLLAGCDWVLEAIIEEREAKRTLFQRLAAILPPQTIVTTNTSTFTLHALLPDELGAWRDRFFVTHFFNPPRALLLCEVTAFPEGEGERFFGFVRFLEQRLGRRALLVRDTPGFVANRFGIYALAHAVRLTTELGLTPEEVDALTGPLLGRPRSATFRTIDLTGVDILVLGTRSLQESTGDDYAVPDWILELYQAKRLGDKTGGGIYRREGEQQLTYDPLQHGDRPFRPAAIPGLDDLLRQPFPERLVGALDLPSPYGDYVRHLLGRTFGYVLARTRDAARDIASVDRALEWGFGWAAGPYAQMQFLGLERVRELLQDAGVPVSDLLALAEERGGFFRDGRVLDPASGELIPEEQLPSTRRTRQIRLREALDRQGTHDLGDGILAVRVRSLEALPELVAGTLAHGPSALVLVPAFAGLGYPYEDLLELAERGEWETIEQRLVTLQEALRAVARLPVPVVTALDGEGRGAATTLALWSDATVAFLTTPLGFPGATVGLLPLGALTALRVRAEAREYGLQAPLRAEFGVVSALTAFLASERVESAQRAGISGLLGDRWLATMDRDGLLDAAAGLARALARSVPRRPLGDAVELGTAGEQVTAGLRLAELEPATRQVVEALVRAVRRSGNVDDLLAAERAVLRELLRDGEYRQRARATLQALAAARR
SIO_010081: TRD_RS09710
subclass of: SO_0000673
so part of: TRD_RS09710
location: 85083..87296
location: region:85083-87296:1
so has part: feature:85083-87296:1:exon

WP_012642608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85083-87296:1:exon

TRD_RS09715
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09715
old locus tag: trd_A0099
so part of: sequence
location: 87323..88093
location: region:87323-88093:1
so has part: feature:87323-88093:1:exon
subclass of: SO_0000010

position:87323:1
position: 87323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88093:1
position: 88093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87323-88093:1:exon

TRD_RS09715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09715
old locus tag: trd_A0099
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871954.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: enoyl-CoA hydratase/isomerase family protein
translation: MTRILRERRDGVLLLRLNRPDKLNAIDAAMLGELCAALEEARVDDTVRVVVLTGNERAFSAGADIDGFAGVTVEELATSRSDLPQWDTIRRFPKPLIAAVSGYVFGGGLELALACDIIVAAQGARFAAPEIKIGLIPGAGGTQLLARRFGKYRAMELVLTGREFSAEEAERWGLVNLIVPAEEYLERALELAQQIAQYPPAAVRAAKAAIVTGLEMPLDAALRFERELFLRIFATPEAQEAIQRFLERRRAKQRAE
SIO_010081: TRD_RS09715
subclass of: SO_0000673
so part of: TRD_RS09715
location: 87323..88093
location: region:87323-88093:1
so has part: feature:87323-88093:1:exon

WP_012643189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87323-88093:1:exon

TRD_RS13790
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13790
old locus tag: trd_A0100
so part of: sequence
location: complement(88190..89530)
location: region:88190-89530:-1
so has part: feature:88190-89530:-1:exon
subclass of: SO_0000010

position:88190:-1
position: 88190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89530:-1
position: 89530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88190-89530:-1:exon

TRD_RS13790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13790
old locus tag: trd_A0100
inference: COORDINATES: protein motif:HMM:NF013672.2
GO function: GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide deacetylase family protein
translation: MRYLRFLWICSLVLGLLAAVQPARAAGPPSVVYFPTTGHHVAEPFLSFWRAHGGLRILGYPLSEAHERDGLLVQYFERARLEASLGCLGKTDCPVQLTRVAAHLTAGRTDPAFAALSLETRPPDTPLRRFFPETGHFLANGFLRFWLRNGGLPVFGYPISEEFTEVDPETGQPVTVQYFERARFSWHPEALGTLWEVQLARLGAELAARDGVETAPVSRQPGVPDYDPALFPRAFRLPVLMYHDIGEPAARYRIPLWRLEQQLDWLLANGYVTISLEQAFEALLADGPLPERAVVITFDDGPRSQLAAARALAARNMTATFFVLPGRSALGAAELRELRSMGHEIGSHSMTHRAMTRLDDGAARWEAETSRRTLESWLGEPVRFFAYPGGDWNPRVASIVSTTGYFGAMAAWGGTRWTREKRWVEPRVEIDGRISLDRFAWYVERF
SIO_010081: TRD_RS13790
subclass of: SO_0000673
so part of: TRD_RS13790
location: complement(88190..89530)
location: region:88190-89530:-1
so has part: feature:88190-89530:-1:exon

WP_012643250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88190-89530:-1:exon

TRD_RS09730
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09730
old locus tag: trd_A0102
so part of: sequence
location: 90215..91165
location: region:90215-91165:1
so has part: feature:90215-91165:1:exon
subclass of: SO_0000010

position:90215:1
position: 90215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91165:1
position: 91165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90215-91165:1:exon

TRD_RS09730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09730
old locus tag: trd_A0102
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008514331.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4007 family protein
translation: MTQPTLLPGQSSERTNGNQERYGFSGHQTFPFRYSWLKKAVDAVHEDPNVFRREDAVVIFGVGKNMVESIRHWGLATQVLEEDQRTRRLRISEWGKLLFLEECDPYLEDPGSLWLLHWLLVSNPARAATWYLAFNVYPFPDFRKDTLVTFIDGFADRNQLRANIGTIRRDVDCFIRTYTPSRWTSTEVPEDSFNCPLVELELLELLPDGMTYRFVVGSKPSLPVEVVAGVILSLLGRLGSGRRTVSIHECLYEPLSPGQVFKLDEPTLVEYLDQLESLTGGDIAVDETAGLHQLYVRRPIDGKELIVQYLRARVTP
SIO_010081: TRD_RS09730
subclass of: SO_0000673
so part of: TRD_RS09730
location: 90215..91165
location: region:90215-91165:1
so has part: feature:90215-91165:1:exon

WP_012642930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90215-91165:1:exon

TRD_RS09735
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09735
old locus tag: trd_A0103
so part of: sequence
location: 91162..94488
location: region:91162-94488:1
so has part: feature:91162-94488:1:exon
subclass of: SO_0000010

position:91162:1
position: 91162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94488:1
position: 94488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91162-94488:1:exon

TRD_RS09735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09735
old locus tag: trd_A0103
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018466163.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTGTLGQRFLRSVQIERDWQSRDVIAHYVPTLQVRQVLRRLGDALANGATDRAWTLTGPYGTGKSVFAAFTLQLLSAVDAAQSEAWRILRLHDSELAFFLQERLNGRRLFPIPVVGRRTSLPGCLIKSLAGQLAILPATAERERLQAYAAEILNTETDRPLDPADILNLLDDVKMLVKHSGYHGIVVVIDELGRILEYAASDPVRGDISLLQELAEFASHSGQDPVLVLGILHQAFDQYARYVDTAMRREWAKVQGRFVDIAFIEPPEQLMRLAVDALAESHAVPRPDTEAIAAVAEIAAGEDLGLRPRLLETALFRDLVQRAAPLHPVSLVVLPYLFRRLAQNERSLFTYLFAHEPFGFQDKVRQHPGAWVRLPDLFDYVAVNLGNSLSRHPLFQRWLEVVQKMDEHPELSCVEVGILKTIGVLDVLAEGSHLRPTPELISFALADTPGDAEIRTSLEGLHRRSLIVFRRFNRSYRVWEGSDVDIPMRLEEARRRTAGQYRLGATLGRYLKARAQVARRHSFETGTLRFFEVRYLDEPLPAEQLRPQSGDGIIACCLPRNDVEAQAFREWACGQEIASRSDLIVALPEQISTLLEAAAELVALHWVRENTPNLRDDRVARRELDTRTAEVEQEIKRLLDRLLDPRPAPVGSRCSWYWLGEKQPIDHPRGVAALLSRAMDQHYSLSPRIWNELINRRVLSTAAAAARRNLIERMLTAGNQPRLGLTGFPPERAIYESVLFATGLHRPNEHGEWGFHPPRPDKDPARLTPLWETMEREILAATEQRIGLQQLFNELAEPPFGAAEGVLPILFCAFFLVYRKEVSLYRNGVFVPEPSVADFEILLRRPDRFEVGGARVVGGRKLVIERLARWLGTEPALLPVVRALLAAVRALPEHAWRTQRLPRAVIELRETCARASSPERLLFFDLPTALGEMPFGTEEVDPARIDRFLERLSEALTALGQATPRVIEEARDRLLEACGLPHGMEGWKALRALAQRLERAAFPPDLAGLLVRLRQEQDDEASVESVLAYLATRPPRLWTDDDVERACTQARIIGKRLRTVAATWDCLTPQDEALSEEIARRVREILPVNVPRHVLRAALLRLLQETD
SIO_010081: TRD_RS09735
subclass of: SO_0000673
so part of: TRD_RS09735
location: 91162..94488
location: region:91162-94488:1
so has part: feature:91162-94488:1:exon

WP_012643011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91162-94488:1:exon

TRD_RS09740
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09740
so part of: sequence
location: 94520..95314
location: region:94520-95314:1
so has part: feature:94520-95314:1:exon
subclass of: SO_0000010

position:94520:1
position: 94520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95314:1
position: 95314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94520-95314:1:exon

TRD_RS09740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008514335.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoadenosine phosphosulfate reductase family protein
translation: MQTGERRVRHILSLSGGKDSTALAIYLRDRIPELEYVFCDTGEELPETYEYLERLEAFLGKPIVRLNPERPFSHYLDLYRGVLPDARTRWCTRMLKIRPFERYVGDDPTIHYIAIRADEAHRKGYISKKPNITPRYPFIEAGITKHDVIRILQESSIGLPSYYTWRSRSGCYFCFFQQKIEWIGLLQHHPDLYEKAMSYEKLDPVTGQRFTWNPEESLQELARPERVEDILTKAGQQYKRDKDSTNLLSILFDDDWDACLICHL
SIO_010081: TRD_RS09740
subclass of: SO_0000673
so part of: TRD_RS09740
location: 94520..95314
location: region:94520-95314:1
so has part: feature:94520-95314:1:exon

WP_041437462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94520-95314:1:exon

TRD_RS09745
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09745
old locus tag: trd_A0104
so part of: sequence
location: 95658..96326
location: region:95658-96326:1
so has part: feature:95658-96326:1:exon
subclass of: SO_0000010

position:95658:1
position: 95658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96326:1
position: 96326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95658-96326:1:exon

TRD_RS09745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09745
old locus tag: trd_A0104
inference: COORDINATES: protein motif:HMM:NF024580.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4007 family protein
translation: MPRYAQGCGLVTADSLTVLGNHIAKADPTLSCLSTHWLMHYHLSAPQGPGPWFWHYLVTRVLKPGYEISGHHLAQELAHALREHGGTRLQERTIRTTATVFIGSYAKPEGLSAIRLLQQVGRDRYLVRQPEPVPLWVFAYALVDTWRQLWPDRVTVNLASLFEPGGLSSIFFLDEASVDQLVVSLAREGLIDLYRVAPPYQLVRRWEGDPRGQILERVYEHP
SIO_010081: TRD_RS09745
subclass of: SO_0000673
so part of: TRD_RS09745
location: 95658..96326
location: region:95658-96326:1
so has part: feature:95658-96326:1:exon

WP_264353694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95658-96326:1:exon

TRD_RS09750
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09750
old locus tag: trd_A0105
so part of: sequence
location: 96313..96813
location: region:96313-96813:1
so has part: feature:96313-96813:1:exon
subclass of: SO_0000010

position:96313:1
position: 96313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96813:1
position: 96813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96313-96813:1:exon

TRD_RS09750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09750
old locus tag: trd_A0105
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIRSLADLANELRTTTKLVRTGVVLVPPTALRQVKDAAYRAGLDVVDYVTWKLERLAPGQRSVPLNVGSFLGDLDEIANGNSVSGCILIANADVPLARLHVHERTLVWDLLLNSFKRRRQAIVLAIPRGAYHLFPQNHEEEWTRLGRIAAIERTGDRGCVDADDR
SIO_010081: TRD_RS09750
subclass of: SO_0000673
so part of: TRD_RS09750
location: 96313..96813
location: region:96313-96813:1
so has part: feature:96313-96813:1:exon

WP_012642943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96313-96813:1:exon

TRD_RS09755
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09755
old locus tag: trd_A0106
so part of: sequence
location: 96797..101002
location: region:96797-101002:1
so has part: feature:96797-101002:1:exon
subclass of: SO_0000010

position:96797:1
position: 96797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101002:1
position: 101002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96797-101002:1:exon

TRD_RS09755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09755
old locus tag: trd_A0106
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTIGDVVRVDVQGTFTPDVQITEFRDPQRNQRLVERYIFTSREQGHELGSVELLWTICESFLPGSRPNRLLVIANYGHGKSHFAVTAANYFGQPVDSPAYRAVLDRLRHVIGDSFQMQRFEQFRSERPPYLIVLLRGDESTTYFTGKFIRALEEALDAHEETRLRRPPGWFNLAERFLEEMLPELQVKAELFLGERYELDLAALKQMVRERDIKALDLCRELSRHLVHVPLDFGEASLREAVEWVADEFTGQGKPFGGVLILFDEFSTFVDSYARGSTSGEAAPLQDLLSGVERRRGKVTFVAFAQLDPRNILEESSTLQTKASGVLKELDRLDEAITLRSVLEEVVDAYLAQDETAWRKLEEELVFRREIQNAMSVTLGLFKRRYEEELRWNRDHFRDTVVKGCFPLHPLTTALFATLKFGRTSQPRSVLRFVFDQVKAKEKEPALRDDGRVNWVLPIVLVDEFAGMFPEPTWTMYQQARDRLGSEADPLLQMVLKAVLLILVGELPMKSLRSQTLIAHLCGQDESRVHGALDELTRRHILRYDRADDRYFFWITLPYQCEQILNDKINKLSLSMSVLQNIVDYLQKHGYLEPVRVNVSWGSPGDWLADYALITAREFSEETLRKLAQRIIADPGRIGASRGLVIWALATTAEEVDHYRQNGQAVLTRALEMVGYPQLPVVLMRPQQPNPDLSESLKRLAALLAFNDSEKQECGREQYEDMLKHQREQVGKLLDQHRSRGVAVIPRALSIIRRLDPPLSLETLLLEVFKAAFRKRPQEFFTQYPQYSKGPSPFRRAVTDLAHALALDNLLQLYPGMKTSNAVAAELFDRYLGPSGKWKLVGQLYRIQSPPPESPLWPAWRVLEEKIPVGAKGVRLSPILETLLNPPYGYDAATLLLLLSAWYGYNRQFLELSVNGRLHELHELIETSGKGSPAKRPQDVLAGLISATVSRRDPGELVRKAQAIVERVERRERVSPDTAKQDIQVLEQALDALDPNTEQRQRFSVTKIRLEKDLNTAKEYTERITIIREHMKRETDPGKLLDLVDQLARLDEPNGVVEAEPKSRLQEEARDKLQKAVETTCQRLERLTHHGDYQQQEAKLAELQEELETRDLRGLAQRVSEARVRLAAERERLEREEKDRILVQQLAAMIVNEQTGLATLRRYADELDRLQAATERGEREVATKRQAVQEALARLEQQLSQLESRLQAVHDSREARQVRDHILRQRYLYEETSEVATIDQLEQRATELQSWLEALERLRERDFHSPVEATAIQQELDRLADVHPWLSEAHREVLTRARQVVQERIVRKRQAAQSWLDDLERRIAAKENPHQLAKALEQEQPFLPDSEKERLARLRQEVAEMLEADAEGQVIRYFKQIRDRKRQWELLQRLMDLVSGTEEP
SIO_010081: TRD_RS09755
subclass of: SO_0000673
so part of: TRD_RS09755
location: 96797..101002
location: region:96797-101002:1
so has part: feature:96797-101002:1:exon

WP_143714756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96797-101002:1:exon

TRD_RS09760
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09760
old locus tag: trd_A0107
so part of: sequence
location: 101002..103182
location: region:101002-103182:1
so has part: feature:101002-103182:1:exon
subclass of: SO_0000010

position:103182:1
position: 103182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101002-103182:1:exon

TRD_RS09760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09760
old locus tag: trd_A0107
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: PglZ domain family
translation: MREVWFDQDGLCPPRPGTVSISDDVSFLEEIDTDRPLLIRGRQRCEWARALADARNWRVHEVQPLREELLTLCSSLTTEQAEEIAQRLGQRFWDLPRPLTLAGVAEALFGGVFWRHEPSEEHASAWLTWLVERAPTGVDAVLARALAGLWQGRSDGITEYCYRVTTREEAIPIIAERLGLQPSAFPREEWEKFPLELRESVVQAIEEWVRKQLIASNGAAVDNWIAAGVSPRVWSRIGNQVSQYFKQNPQYLTLERLDALRPYLSSFELERLASLCPRPDPGLPPEGFEAVCQWFRDRYLPWREWTLSSGDEAALERAREIGRRFATWCLEQYPKLGVSPQAGQLFGWARVNELRTQPDDATVTLLVILDGCSVSDAVSLLRHVQAETDRFTVTRNDVVLTSVPTVTQFTKPALLEGVPPDQIRQADPDETSSRLREVIAALERAAPGAVVTWRLSEPDASYHRARTREDANNEVDLRLRSIARALRQIADEVPAARRLRVVLTTDHGRLLGKARRTLTVPPGWHTHGRAAWGPATGQRINTGFRIEERTALLDAAAYDLPAEYAYRIALTDEAFVTSDGRGGEEWFPHGGLFPEEVLVPWIELERDLAVPSPVVAIKGDGRAYGSGTLVVMVTNEASIPLQLLKLELEFRQRRDIVSITETIGPLSQVTITRQIESWPTPQDCREARVRLTYRLPSGAHPTIQVEKIELTSRTLYDQTNILEDLQ
SIO_010081: TRD_RS09760
subclass of: SO_0000673
so part of: TRD_RS09760
location: 101002..103182
location: region:101002-103182:1
so has part: feature:101002-103182:1:exon

WP_012642882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101002-103182:1:exon

TRD_RS09765
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: brxL
locus tag: TRD_RS09765
old locus tag: trd_A0108
so part of: sequence
location: 103179..104627
location: region:103179-104627:1
so has part: feature:103179-104627:1:exon
subclass of: SO_0000010

position:103179:1
position: 103179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104627:1
position: 104627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103179-104627:1:exon

TRD_RS09765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: brxL
locus tag: TRD_RS09765
old locus tag: trd_A0108
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018466169.1
GO function: GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO process: GO:0030163 - protein catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BREX system Lon protease-like protein BrxL
translation: MTSVARVVSGSESLADKVERVFRGLVIDKRRLPASQLQKRGVPAYVGEWLLDTLVPGRGELTEEEARKVREWAEKYVPGPNDQQIIKHRLLQGEVIKVLTPVQVEVSLARATRSAKLRLLGIEDAAISDELPTRYPDLLRQGMWGVVELLSTGDGVAIQSFRPMQASLDLGLYKEARQEFTLDEWLRLMLTSMGYAPEAFTAEEQLWLIARLLPLVQKNLHLVELAPKATGKSYFYENISPRVRLVSGGNITPAVLFVNNATGQWGLLARYAVVVLDEVQTLKFEKPEEIIGGLKGFLANGRLTRGGLHEASSDCSFVMLANVPLDEKQEPIIQQNSLVDYLPEFMRETAFLDRIKGLLPGWKIRKLSKEAFANSVGLKADFFGDALLTLREDLEIDQYCARRIRLRGNRPYARNEIAVQALASGMMKILFPHGRVSDWDFRHYCVEPAVQLRQGIWDLLYQLDGEYRQWDRLIEAEIVPMS
SIO_010081: TRD_RS09765
subclass of: SO_0000673
so part of: TRD_RS09765
location: 103179..104627
location: region:103179-104627:1
so has part: feature:103179-104627:1:exon

WP_012643236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103179-104627:1:exon

TRD_RS09770
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09770
old locus tag: trd_A0109
so part of: sequence
location: 104624..105778
location: region:104624-105778:1
so has part: feature:104624-105778:1:exon
subclass of: SO_0000010

position:104624:1
position: 104624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105778:1
position: 105778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104624-105778:1:exon

TRD_RS09770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09770
old locus tag: trd_A0109
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019459747.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine desulfurase family protein
translation: MSVRPIYLDYHATTPCDPRVVEVMLPYLTGDFGNPASGFHVYGRRAARAVEMAREQVAALIGAQASEIVFTSGATESNNLVLLGLTSSDQSRRRIVTTAVEHKSVLEPCRILHERGFEVVVLPVLPDGTVDLAAAEAAINEETLLVSVQTANNEIGSIQPIAVLAELAHRRGALLHTDAAQAVGKIPFNVEELGIDFASVSAHKLYGPKGIGALYVRSGLRRRLTPLLLGGGQEFNLRPGTLNVPAIVGFGEACRLAREEMPEEARRVAALRDLLESQLANRIPGLRFNGHRTRRLPGNSSITFPKIEADVLIANVPEVALSTGSACSSGTIEPSHVLTAIGLDWEEAHATIRIGIGRFTTREEIERAAHLIAIAWERLVEAGQ
SIO_010081: TRD_RS09770
subclass of: SO_0000673
so part of: TRD_RS09770
location: 104624..105778
location: region:104624-105778:1
so has part: feature:104624-105778:1:exon

WP_041437216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104624-105778:1:exon

TRD_RS09775
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09775
old locus tag: trd_A0110
so part of: sequence
location: complement(106181..107512)
location: region:106181-107512:-1
so has part: feature:106181-107512:-1:exon
subclass of: SO_0000010

position:106181:-1
position: 106181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107512:-1
position: 107512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106181-107512:-1:exon

TRD_RS09775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09775
old locus tag: trd_A0110
inference: COORDINATES: protein motif:HMM:TIGR02710.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR02710 family CRISPR-associated CARF protein
translation: MNQPVRRVLVLNVGKPTDGNVADRPEAYALREARPDFVAFVCSHAADFQAGSLRFVDDYAALTGLPPERYEVVSLEDPDDLVACYQRLVECFADLRRRFPDAEFLADYTAGTKSMSAALVLAALDSEGRPEVQLRLVRGARGHQATVIPGTESFAPVSGVHDVRARRFVGLARLALERFDYAEAAATLDQALQRELSAALRTRLEHARNLCRAFDAWDRYELATAKTFLELYRRDWHSWLTVLDQLTSVVHAFAPGQPDARGSRLTPLEQLRDPYIAVEDILFNAERRATQSRYDDAVARVYRALELLVQLRLWLGHRIDTSDVELAGLPEAWRAKLAGRTEGNGPVRLALVQAWDLLADLPDEPLAGWLAAERPRLLQWTQHRNYSLLAHGFAPVTATGWREHGQAGLALCRAALAELSRTRVRRALQHQQFPRADLLANLD
SIO_010081: TRD_RS09775
subclass of: SO_0000673
so part of: TRD_RS09775
location: complement(106181..107512)
location: region:106181-107512:-1
so has part: feature:106181-107512:-1:exon

WP_012642491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106181-107512:-1:exon

TRD_RS13800
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: cmr6
locus tag: TRD_RS13800
old locus tag: trd_A0111
so part of: sequence
location: complement(107516..108463)
location: region:107516-108463:-1
so has part: feature:107516-108463:-1:exon
subclass of: SO_0000010

position:107516:-1
position: 107516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108463:-1
position: 108463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107516-108463:-1:exon

TRD_RS13800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: cmr6
locus tag: TRD_RS13800
old locus tag: trd_A0111
inference: COORDINATES: protein motif:HMM:TIGR01898.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III-B CRISPR module RAMP protein Cmr6
translation: MRERPRPDQPRGNGRPPQRGEARPRSGGRSGPPRDRDRSAEHADGERGRPHPLLPSATRMLWNSVRNQVANPGLLFDRFAPEAAVFGDRTEATPRRDFLREVIAAAERLAKDALAEQILVRWEATVRAAGAEPCSVELESRLVSGLGAHGPLEIGFRFDRLGFPVLPGSGLKGVARAYAHLVERRNESDPDFLAVFGRVPRSGEAHEVGQAGALVFFDAYPEPGWRLELDVMTPHYPDYYSGKEPPTPWQNPKPITFLAVAPGTRYRLAIGLRQGVSDPDGRLRQLALGWLRNGLAQLGFGAKTTSGYGVFRNRE
SIO_010081: TRD_RS13800
subclass of: SO_0000673
so part of: TRD_RS13800
location: complement(107516..108463)
location: region:107516-108463:-1
so has part: feature:107516-108463:-1:exon

WP_012642605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107516-108463:-1:exon

TRD_RS09785
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: cmr5
locus tag: TRD_RS09785
old locus tag: trd_A0112
so part of: sequence
location: complement(108456..108878)
location: region:108456-108878:-1
so has part: feature:108456-108878:-1:exon
subclass of: SO_0000010

position:108456:-1
position: 108456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108878:-1
position: 108878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108456-108878:-1:exon

TRD_RS09785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: cmr5
locus tag: TRD_RS09785
old locus tag: trd_A0112
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014434573.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III-B CRISPR module-associated protein Cmr5
translation: MSQPVHRTTQQRTLEQQRAARAWACVAAVKGTSYAAEYGQLAREAASLVQLHGLGQTLAFLVSKRPDKPGQVNAHLHLARDLSRWVGTQLTGQELDDLREWIVRHASVAEYRRATLEALAFLAWLKRFAEAELVKEGADA
SIO_010081: TRD_RS09785
subclass of: SO_0000673
so part of: TRD_RS09785
location: complement(108456..108878)
location: region:108456-108878:-1
so has part: feature:108456-108878:-1:exon

WP_012642478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108456-108878:-1:exon

TRD_RS09790
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: cmr4
locus tag: TRD_RS09790
old locus tag: trd_A0113
so part of: sequence
location: complement(108893..109816)
location: region:108893-109816:-1
so has part: feature:108893-109816:-1:exon
subclass of: SO_0000010

position:108893:-1
position: 108893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109816:-1
position: 109816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108893-109816:-1:exon

TRD_RS09790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: cmr4
locus tag: TRD_RS09790
old locus tag: trd_A0113
inference: COORDINATES: protein motif:HMM:TIGR02580.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III-B CRISPR module RAMP protein Cmr4
translation: MAEASALLFAYCETPVHAGTGRAVGTVDLPIQRERITGFPIAQASSVKGVLRATTQANGADAERHRALFGPDRPEEASTHAGALQVTDLQVVLFPVRSLAGVFAWTTSPAVLARLVRLAKLAGIEGPVDPTRFAGLQPGQCAVANGSALLTPAGQQVGVVLEEYSFTLAGELAGLVSALAEWLVALALPQTPEYAWWRENLAKHLCVLPDDEFRDFVLYATEIEAHVRLKDETKTVEPGALWTTETLPAETLLVGLLATTRSRYDKVNEDGRALLGWLTGKLDGRRVRLGGDETTGRGAVVLRVARV
SIO_010081: TRD_RS09790
subclass of: SO_0000673
so part of: TRD_RS09790
location: complement(108893..109816)
location: region:108893-109816:-1
so has part: feature:108893-109816:-1:exon

WP_012642808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108893-109816:-1:exon

TRD_RS09795
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09795
old locus tag: trd_A0114
so part of: sequence
location: complement(109818..110888)
location: region:109818-110888:-1
so has part: feature:109818-110888:-1:exon
subclass of: SO_0000010

position:109818:-1
position: 109818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110888:-1
position: 110888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109818-110888:-1:exon

TRD_RS09795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09795
old locus tag: trd_A0114
inference: COORDINATES: protein motif:HMM:NF021236.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III-B CRISPR module-associated Cmr3 family protein
translation: MTTLFLEPLDVWLFRDGRPFTAGQQFRAASRFPPSPLVVQGALRAYHLMVHSTVPPWDAAAVAGVVGGPDDWGPLRLVGPLVARRTASGEFEVLLPPPADAAFPGRQARRLPLPEQPPEWLRLPTPTPALFPLWHAGEPVSEKASQRLWLRLTDFAAYSRGEPVPGVPQEELWAEEVRIGIAQDSSRRTTREGLYYEARYVRPAPGVGLLVSFTGLDWPEPAGVLALGGERRSARFEVVTSFAPPPVPEPLPERFVLFFLTPAVFERGWLPRDWGAFFEGSVELVAAALDRYETVGGFDLARGRERPAHRAVPAGSVYYFVARGEARLRRTSDLPWPTVSDWGAEIGFGTVLIGGW
SIO_010081: TRD_RS09795
subclass of: SO_0000673
so part of: TRD_RS09795
location: complement(109818..110888)
location: region:109818-110888:-1
so has part: feature:109818-110888:-1:exon

WP_012642992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109818-110888:-1:exon

TRD_RS09800
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: cas10
locus tag: TRD_RS09800
old locus tag: trd_A0115
so part of: sequence
location: complement(110885..112699)
location: region:110885-112699:-1
so has part: feature:110885-112699:-1:exon
subclass of: SO_0000010

position:110885:-1
position: 110885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112699:-1
position: 112699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110885-112699:-1:exon

TRD_RS09800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: cas10
locus tag: TRD_RS09800
old locus tag: trd_A0115
inference: COORDINATES: protein motif:HMM:TIGR02577.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III-B CRISPR-associated protein Cas10/Cmr2
translation: MPDAVLRFTFGPVQAFIAEARRTADLYAGSHILAELARAVARSLQDAGAELVYPADLGSGDPPNVIVARVPWEDVEQLAERAAAALQTRWEQLASDALAKIESYAPLDDALRAQWQAQTGDVWEIYWAAARIEQDDYATAFHRAQAGVAALKKTRTFTQRAEAGAKDSLGGNRAALAPAGQDPRAFWRAVRRHPQGGRLVGEHERLDAVSAVKRFAYSEEAYPSVPTIAARPFARLAAERAAPALESYRDAFELLVTAFGQRPDRYRRTRHTVEAFPYDGAFLYESTLEWPALLEELGLDPDEAERLRSQVETPLRTARHRLAELYQAVGQRPSRYVAVVVLDGDSMGQWLTSALAQGGEPVHREISRKLAGFAASVEETARQQARDAVFIYRGGDDVLALTPAEQAVSLALALAAAFAEITDGRSASAGIAIGHWLEPLGDLLRSAREAEKRAKRLPGKGAVAVELQPRGGEIVHVVARADRLMGLDLPDLVDRFRRDGAGSLSGRLPTDLRQYARTFPQADAAFRAVLARSVKRQGEWPSGTADERERLVERLYGFATSYDQLRASLPGEDDSRRFERVPSGPAQLADWLALARFLARGGGE
SIO_010081: TRD_RS09800
subclass of: SO_0000673
so part of: TRD_RS09800
location: complement(110885..112699)
location: region:110885-112699:-1
so has part: feature:110885-112699:-1:exon

WP_012642389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110885-112699:-1:exon

TRD_RS09805
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: cmr1
locus tag: TRD_RS09805
old locus tag: trd_A0116
so part of: sequence
location: complement(112692..113846)
location: region:112692-113846:-1
so has part: feature:112692-113846:-1:exon
subclass of: SO_0000010

position:112692:-1
position: 112692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113846:-1
position: 113846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112692-113846:-1:exon

TRD_RS09805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: cmr1
locus tag: TRD_RS09805
old locus tag: trd_A0116
inference: COORDINATES: protein motif:HMM:TIGR01894.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III-B CRISPR module RAMP protein Cmr1
translation: MSKEHSLPSVRLPLETLTPLFLGGADPRGDPELRASSIRGALRFWLRALLGGCYGTDDQALAEIRRLEAETFGEAGGEGKAGASKIVVRVRQEQQSAPQEWRAARDSGRAYLFFSMAPSRARDQEIPARRALAPPYPFSIDLLARPGVDEREAREALYRAVRSAWLLLHLGGLGARARRLGGALAHRPVPRRSPDGATTPAVPSHLNLPFALSPEPQQAARQLAEGLRLLRQRSQARADANPERPGWEVLDPRWCRIWVFGERGWTSGERGWPTVADAIGEWLRETRRALPTEQRLVFGAPLVIPKQHKTIEPPSGYERRERRPSPLWLSVTRAENGNLLGVATLFQSRFLPLRRGGEEQLERLYTQIAAAVAQLPNVAEVQYA
SIO_010081: TRD_RS09805
subclass of: SO_0000673
so part of: TRD_RS09805
location: complement(112692..113846)
location: region:112692-113846:-1
so has part: feature:112692-113846:-1:exon

WP_012642600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112692-113846:-1:exon

TRD_RS09810
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09810
old locus tag: trd_A0117
so part of: sequence
location: complement(113862..114668)
location: region:113862-114668:-1
so has part: feature:113862-114668:-1:exon
subclass of: SO_0000010

position:113862:-1
position: 113862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114668:-1
position: 114668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113862-114668:-1:exon

TRD_RS09810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09810
old locus tag: trd_A0117
inference: COORDINATES: protein motif:HMM:NF024758.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine protease
translation: MGRANSLLLVAVLFAGLLTLALAGLAVARWRAPVDVPALDTRVVLTVTPIPTVPPLTPAPTAPAPTPVASGPADPGDRATMVNRALHGVLQVRVPDGLGTGFVWARESDRTLVVTAAHVVAGWERVEVIAPDGTAHPATVRQRDERHDVALLEAPALVGVQPLPRGQSRQLPLGSALTALGYALGDQLLGEPTVTRGVLSGRRTFDGIEFLQTDAALNPGVSGGPLLDEQGRVVGMAIGGIPWAGEIPAQGVNFAVAIEEIEQVVAMA
SIO_010081: TRD_RS09810
subclass of: SO_0000673
so part of: TRD_RS09810
location: complement(113862..114668)
location: region:113862-114668:-1
so has part: feature:113862-114668:-1:exon

WP_012643309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113862-114668:-1:exon

TRD_RS09815
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09815
old locus tag: trd_A0118
so part of: sequence
location: complement(114678..115580)
location: region:114678-115580:-1
so has part: feature:114678-115580:-1:exon
subclass of: SO_0000010

position:114678:-1
position: 114678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115580:-1
position: 115580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114678-115580:-1:exon

TRD_RS09815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09815
old locus tag: trd_A0118
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: zinc ribbon domain-containing protein
translation: MRCTACQAALPAEARFCPACGQPVPDPVPTPDTAALPLTAGKATGDSPASSDASLPAPDEPKGQPAPPSPPDHPAAPGEPAMPRSSAASASAPAPGRNRTVTLLGILSGLLLLALLASGALAYVELDRRQARERALGEQIASLSQANRDFQTQVQSLTSERDRLATERDQLIGERDRLQSRLNELMATNAEQEKRIQELTGQVQEQSRQLSQVREEATRQQQRAETAENIGSILTRVVLLDDQIHNEFDNLIDAMTDMQNAYRYGDRIAFANAYERGLQAARRLDQLFAQRDQLLAQLGF
SIO_010081: TRD_RS09815
subclass of: SO_0000673
so part of: TRD_RS09815
location: complement(114678..115580)
location: region:114678-115580:-1
so has part: feature:114678-115580:-1:exon

WP_143714758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114678-115580:-1:exon

TRD_RS09820
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09820
old locus tag: trd_A0120
so part of: sequence
location: complement(115580..116920)
location: region:115580-116920:-1
so has part: feature:115580-116920:-1:exon
subclass of: SO_0000010

position:116920:-1
position: 116920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115580-116920:-1:exon

TRD_RS09820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09820
old locus tag: trd_A0120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012870723.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRSRWFVTALLLATLLAPALPVSAQQPGLSVAFWRTWARADRPVAEGRAARTWMWGPAPITHVLVEEYDEATDFDGDVLGFRMVQYFDKTRMEITDIGADPVNPWYVTNGLLAKELITGQVQLGHNRFAQAPAARVPVAGDLDDPNAPTYASFQPLMGYQPLPVGMTIIQTVDRNGTVGADQTVARYGVTAAALVRETNHTVASVFWDFMNARGTVYSDGAFREDRLFENPFYATGFPLTEAYWTTVRVGGVPKRVLVQVFERRVLTYTPDNPPGWRVEAGNVGLHYYQWRYGQLGEQPVTWDTARPEELPYYDAIIPTVFPLAAELQPLAAMLDNPALDAPGWRADIERRLIFLQDCARAMREATPPPTLSAFHSELMVGLELVERGAVRIRRALDTRDPVLLWQGRDDIAAGLRAFANAFERYRNQLRAVPGSEPVVFLAEGVH
SIO_010081: TRD_RS09820
subclass of: SO_0000673
so part of: TRD_RS09820
location: complement(115580..116920)
location: region:115580-116920:-1
so has part: feature:115580-116920:-1:exon

WP_012643032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115580-116920:-1:exon

TRD_RS09825
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09825
old locus tag: trd_A0121
so part of: sequence
location: 117048..118442
location: region:117048-118442:1
so has part: feature:117048-118442:1:exon
subclass of: SO_0000010

position:117048:1
position: 117048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118442:1
position: 118442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117048-118442:1:exon

TRD_RS09825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09825
old locus tag: trd_A0121
EC number: 3.4.13.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015942216.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dipeptidase
translation: MQDLVQRCDRYLAEHEAEHLQALGDLLRIPSVSALPQHQADVQRAAEWVAARLRAIGVPEVRLLETERNPIVFGHWPVDPSLPTALVYGHYDVQPPDPLELWETPPFEPTLRDGRLYARGASDDKGNLFAALCGIEALVRIIGHPPINLKFFFEGEEEIGSPSMAAAIRQYRELLACDVVISADGGMYGHDQPSLTLSSKGICACQVDLRTAATDMHSGQYGAVIANAVQTLVQLAATFHTPDGRVAVAGFYDKVRELSPEERAEIAAVPFDPDEFLANVGAKALWGEPGYTPLERAWARPTLDLNGFWGGFQGEGIKTVTPCEAHLKITCRLVPDQDPEEILDLIERHVQAHCPPWAEVRVTRFPGSARPFAIRRDHPALAAAREVLRELYGKEPLMTRVGGTIPVAELFQRELGADMLFFAWGMPDNRVHAPNESYRLEDFRTMARAYVRLLPRLATVMARA
SIO_010081: TRD_RS09825
subclass of: SO_0000673
so part of: TRD_RS09825
location: 117048..118442
location: region:117048-118442:1
so has part: feature:117048-118442:1:exon

WP_012642636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117048-118442:1:exon

TRD_RS09835
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09835
old locus tag: trd_A0123
so part of: sequence
location: 119277..120989
location: region:119277-120989:1
so has part: feature:119277-120989:1:exon
subclass of: SO_0000010

position:119277:1
position: 119277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120989:1
position: 120989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119277-120989:1:exon

TRD_RS09835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09835
old locus tag: trd_A0123
inference: COORDINATES: protein motif:HMM:NF019976.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NERD domain-containing protein
translation: MATMYPQFPRYCGFQSDAKLLVYGVLAHQLPDECIVLFGVRLLVRDGPDEIDAEADFIIVEPECGVLVLEIKGGGIRRDARTGQWFSLDRRGEQHAIGNPIEQARRTRYALARKLKEGPRTKLFDYPIRHAVIFPDVTLRQQWLGPDVEPDIVLDERSLTGLHGAIRRALGGPRPEGPLAPAAIQALVDALSPTIEVRKPRLGRLVREAEEEIVQLTERQFAVLRLLERHRRARIVGPAGSGKTMLAIEKARQLALQGNRVLLTCFNRNLSRWMRRTLQDALGTTELFEGDRPLLVVTHFHGLVRDFCERTGRRFQPPAGDRREEERFWKEQAPQILIDSVEQLPDLRFDAIIVDEGQDFLTDWWIALLEVLGDQERGFLYIFYDDNQTLYTDSRQLEFPIVDEPYMLAEVFRNTRPIFERFRPFYRGSIEPLFRGPDGPEVEEVPVTGQGVLQALASRLRRLFEEEGIEPRDVVILTPRSRERSALRDKTRIAARWQLTWEPVDREEVNHRVRASSIHAFEGLESPVVILAELDDLAHPRVDEPLSVALSRARSHLIVLGELPVDLLSL
SIO_010081: TRD_RS09835
subclass of: SO_0000673
so part of: TRD_RS09835
location: 119277..120989
location: region:119277-120989:1
so has part: feature:119277-120989:1:exon

WP_143714759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119277-120989:1:exon

TRD_RS15130
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS15130
old locus tag: trd_A0126
so part of: sequence
location: 121736..122689
location: region:121736-122689:1
so has part: feature:121736-122689:1:exon
subclass of: SO_0000010

position:121736:1
position: 121736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122689:1
position: 122689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121736-122689:1:exon

TRD_RS15130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS15130
old locus tag: trd_A0126
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIDHLLEQLLDRIRHDPDLRRQLAQLLFGRELAQLADQLAQLASLVRSLAESTQQGFQLLAERSSLVERELATLRRVVGELAEQQRATTAQIAALTERMERVEGQIAALTERMERVEQQQTATTEQIRQLTERMERVEQQQAATTAQIQLLAAQVSELVEMTRRHEDSIGQLRGWYLESKARDRAPAVFGPWLERVRLAPVDEIRRRVLPVLGKEGLRRILAADVIVSGRADDLPNAPTVWLVVEVSAVVDPSDVARALERAALLRQVTENVIPVVWGPQLTEEARYLAEEQALVVVRDGALEGWEAALQRWVATG
SIO_010081: TRD_RS15130
subclass of: SO_0000673
so part of: TRD_RS15130
location: 121736..122689
location: region:121736-122689:1
so has part: feature:121736-122689:1:exon

WP_012643268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121736-122689:1:exon

TRD_RS09850
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09850
old locus tag: trd_A0128
so part of: sequence
location: 123383..123766
location: region:123383-123766:1
so has part: feature:123383-123766:1:exon
subclass of: SO_0000010

position:123383:1
position: 123383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123766:1
position: 123766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123383-123766:1:exon

TRD_RS09850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09850
old locus tag: trd_A0128
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIDHLLEQLLDRIRHDPDLRRQLAQLLFGRELAQLADQLAQLASLVRSLAESTQQGFQLLAERSSLVERELATLRRVVGELAEQQRATTAQITALTERMERVEGQIAQMTAEVALLALSVQRLDDR
SIO_010081: TRD_RS09850
subclass of: SO_0000673
so part of: TRD_RS09850
location: 123383..123766
location: region:123383-123766:1
so has part: feature:123383-123766:1:exon

WP_012642645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123383-123766:1:exon

TRD_RS09855
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09855
old locus tag: trd_A0129
so part of: sequence
location: 123800..124210
location: region:123800-124210:1
so has part: feature:123800-124210:1:exon
subclass of: SO_0000010

position:123800:1
position: 123800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124210:1
position: 124210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123800-124210:1:exon

TRD_RS09855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09855
old locus tag: trd_A0129
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDRAPAIFGSWMDATRVVPPMEIRRLVRESLTRSQLPRLLDADIIVTGELDEHPATPTVWLVIEVSTTVDASDVERALARANLLRRVVPNVIPVVTGDQLVDQARKMAEEERVVIVRDGTLTGWDEAIEQWVVAA
SIO_010081: TRD_RS09855
subclass of: SO_0000673
so part of: TRD_RS09855
location: 123800..124210
location: region:123800-124210:1
so has part: feature:123800-124210:1:exon

WP_012643001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123800-124210:1:exon

TRD_RS15135
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS15135
old locus tag: trd_A0130
so part of: sequence
location: complement(124279..125658)
location: region:124279-125658:-1
so has part: feature:124279-125658:-1:exon
subclass of: SO_0000010

position:124279:-1
position: 124279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125658:-1
position: 125658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124279-125658:-1:exon

TRD_RS15135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS15135
old locus tag: trd_A0130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012872583.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferritin-like domain-containing protein
translation: MSHALELPASLQEQRLTRRAVLRGTTALGAGVLAARLGLLRAVAQETESVKEILDIAVTAEAMAVTLLGGAIDQARKGAYDKPVPDPVIAILEGARAAEQFHYEYLTAAGAQPLTTTFTIPDTSILTKYDSLFQTIVTLDTAFIAAYMAAAQQFTRLKQPDLVRVAFQIAGVEAEHRVLANVALGTRPANDVAFEAALFQTVGQAATALKDLGYIGGRGPSVTYPGPGAIRRDLITQQTPGDVSAVCEPPTAGGGPVVPPPEALRPAQPKPGAAYFPETNHNVSGAFLQYWQRYGGLPVFGYPLSEEFEHAGIRMQYFERARFELHPGSWPERWDVLLGLLGREVTTGRQSEAPFRPSMPLPGAAVWGHDSITEQTDAIYFMETQHNLAHGFLRYWWAYGGLPIFGYPISEEFRERNRDTGKEYVVQYFERARFEWHPGEWPERWDVLLGRLGAELLNL
SIO_010081: TRD_RS15135
subclass of: SO_0000673
so part of: TRD_RS15135
location: complement(124279..125658)
location: region:124279-125658:-1
so has part: feature:124279-125658:-1:exon

WP_012642875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124279-125658:-1:exon

TRD_RS09865
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09865
old locus tag: trd_A0131
so part of: sequence
location: complement(125704..126303)
location: region:125704-126303:-1
so has part: feature:125704-126303:-1:exon
subclass of: SO_0000010

position:125704:-1
position: 125704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126303:-1
position: 126303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125704-126303:-1:exon

TRD_RS09865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09865
old locus tag: trd_A0131
inference: COORDINATES: protein motif:HMM:NF025049.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferritin-like domain-containing protein
translation: MQCQSVQDIISIAATAEALAVTVIGEALAAAERGELALTEDERTFLRAARAAEQAHYEVLTAAGAKPLTLVFTVPDTRAVSDPVLLLRTAIGLEEAFIAAYCAAAQQFASLGQPDLVRVAVQIGGVEAEHRALLRHFAILRGALGGVPDDVAYQKALFSSVGSAADALIQLGWIGGSGPEIRYPGPGAIDTRGVKQLRP
SIO_010081: TRD_RS09865
subclass of: SO_0000673
so part of: TRD_RS09865
location: complement(125704..126303)
location: region:125704-126303:-1
so has part: feature:125704-126303:-1:exon

WP_012643187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125704-126303:-1:exon

TRD_RS09870
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09870
old locus tag: trd_A0132
so part of: sequence
location: 126561..127151
location: region:126561-127151:1
so has part: feature:126561-127151:1:exon
subclass of: SO_0000010

position:126561:1
position: 126561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127151:1
position: 127151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126561-127151:1:exon

TRD_RS09870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09870
old locus tag: trd_A0132
inference: COORDINATES: protein motif:HMM:NF019265.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MSGGEDITLLQAVARGDEDALVQLYDRYGRQAFGLAYRILGDAASAEEVVQDAFLALWHHARLLTMHTGSARAWLLTVVRNRAIDHLRRRRGQVQLVSLDAVVLPSIADDTAREIIERVQRADLLKALDALPKEQREVVELAYFEGLTHHEIATRLRIPLGTVKSRLRLALLRLGRTLEGYEGEAPDATLADEQPT
SIO_010081: TRD_RS09870
subclass of: SO_0000673
so part of: TRD_RS09870
location: 126561..127151
location: region:126561-127151:1
so has part: feature:126561-127151:1:exon

WP_012643300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126561-127151:1:exon

TRD_RS09875
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09875
old locus tag: trd_A0133
so part of: sequence
location: 127120..127863
location: region:127120-127863:1
so has part: feature:127120-127863:1:exon
subclass of: SO_0000010

position:127120:1
position: 127120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127863:1
position: 127863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127120-127863:1:exon

TRD_RS09875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09875
old locus tag: trd_A0133
inference: COORDINATES: protein motif:HMM:NF021604.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anti-sigma factor
translation: MPLSQMNSQRDWVQHEEIRELLPGYALGILTEDEQRRVEAHLVTCTDCRVELDRFRTTVLVLALAAPEREPPGSLRTSIRAAVQQQGERVATPQAVRSRFERWRERFQQRVALAWGLAVVALLASFILAGWNVMLQRQLSGVQYRIAAGTVSGNIRYLPSEQVLVIDLRGLPTLPAERVYQLWAIPDGTPVPMATFTETTRRIAVVGDPATLGTLAITVEPGPLGSPSPTSQPLVMIDLRHQRGTAS
SIO_010081: TRD_RS09875
subclass of: SO_0000673
so part of: TRD_RS09875
location: 127120..127863
location: region:127120-127863:1
so has part: feature:127120-127863:1:exon

WP_012642741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127120-127863:1:exon

TRD_RS13810
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13810
old locus tag: trd_A0136
so part of: sequence
location: 128380..129120
location: region:128380-129120:1
so has part: feature:128380-129120:1:exon
subclass of: SO_0000010

position:128380:1
position: 128380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129120:1
position: 129120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128380-129120:1:exon

TRD_RS13810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13810
old locus tag: trd_A0136
inference: COORDINATES: protein motif:HMM:NF021601.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide deacetylase family protein
translation: MARRVLVSVHDVAPAWVEEVRWLLRELDAIGARPRSLLVIPCHNGRDDLRRCPELVELLQVEVANGSEIVLHGYTHARAWRWRGDPLTVARAALFAREVAEFASLGWPEQRARLIAGREILAACGLETTGFCPPGWLHTAELPSLLAELGFAYLVEMLFLVDVCDQRRLPTPWMGFMGTPWLHEGLAQLGARLLAPWRARARTISVFFHPQGAPDSPVCRRALRELARELERGGEPSTYGAAIALP
SIO_010081: TRD_RS13810
subclass of: SO_0000673
so part of: TRD_RS13810
location: 128380..129120
location: region:128380-129120:1
so has part: feature:128380-129120:1:exon

WP_012642462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128380-129120:1:exon

TRD_RS09885
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09885
old locus tag: trd_A0137
so part of: sequence
location: 129095..129808
location: region:129095-129808:1
so has part: feature:129095-129808:1:exon
subclass of: SO_0000010

position:129095:1
position: 129095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129808:1
position: 129808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129095-129808:1:exon

TRD_RS09885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09885
old locus tag: trd_A0137
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012642793.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MEQRSHCPDLSIVIPARNEAATIERALVSVLHQAWPLERLEVIVVDNGSTDGTAAVVCRFAHAHPELQLQVVHEPRPGVSRARNRGARVARGKVLLFLDADSRLAPTMIPTVLGHLHRGEAAVSLRVVADSNDPIDRAFFFLATWAKERLRVPTQLCAVRRDVFLAVGGFDERLRIAEDYDLLRRIRAAGWRVGFVTESSVLTSPRRLHRWPLRLGLLVTALQWLVALAGIGRDWPY
SIO_010081: TRD_RS09885
subclass of: SO_0000673
so part of: TRD_RS09885
location: 129095..129808
location: region:129095-129808:1
so has part: feature:129095-129808:1:exon

WP_012642671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129095-129808:1:exon

TRD_RS13815
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13815
old locus tag: trd_A0138
so part of: sequence
location: 129822..130526
location: region:129822-130526:1
so has part: feature:129822-130526:1:exon
subclass of: SO_0000010

position:129822:1
position: 129822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130526:1
position: 130526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129822-130526:1:exon

TRD_RS13815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13815
old locus tag: trd_A0138
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012642671.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MAGTIDISVIIPARNEEAFVARALRSIARQAWPLERLEAIVVDNASSDGTAAVVLQVARELAPLRIVLVEERTPGRSRAKNRGAAVAQGTLLLFLDADSVMAPTLASELVAHWHTGYPAGSIRVIAETTDRLDRWFFDLMELGKTLFRIRAQMLYCSRAWFERAGGFDERFEIAEDREFLQRLQRMGVPVCHLTTSWIATSPRRLRRLPLRLGLVITFLRWLLAELGVGRHWRY
SIO_010081: TRD_RS13815
subclass of: SO_0000673
so part of: TRD_RS13815
location: 129822..130526
location: region:129822-130526:1
so has part: feature:129822-130526:1:exon

WP_226980750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129822-130526:1:exon

TRD_RS09895
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09895
old locus tag: trd_A0140
so part of: sequence
location: 130523..131122
location: region:130523-131122:1
so has part: feature:130523-131122:1:exon
subclass of: SO_0000010

position:130523:1
position: 130523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131122:1
position: 131122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130523-131122:1:exon

TRD_RS09895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09895
old locus tag: trd_A0140
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKELPWWLIRLGRAGGGRAIGLLAVWLGWERLTELVWRPQSVRPGGFFRYRIVRYRGPTMILADGTRIEPGDTIVELHFDNRRLLRLWLAGASLPWELLRLAREDLAELACRIARGELGEVRALTGVTLFARAGRRLGFQVEPAPPTWYTRLQRFFFVGLIAIYHPLGWRMAERYRERAWPGRAWMSRASLLARYGAGC
SIO_010081: TRD_RS09895
subclass of: SO_0000673
so part of: TRD_RS09895
location: 130523..131122
location: region:130523-131122:1
so has part: feature:130523-131122:1:exon

WP_012642571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130523-131122:1:exon

TRD_RS09900
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09900
old locus tag: trd_A0139
so part of: sequence
location: complement(131104..131598)
location: region:131104-131598:-1
so has part: feature:131104-131598:-1:exon
subclass of: SO_0000010

position:131104:-1
position: 131104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131598:-1
position: 131598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131104-131598:-1:exon

TRD_RS09900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09900
old locus tag: trd_A0139
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008479632.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: vitamin K epoxide reductase family protein
translation: MSGRPRWQLVSLALALAGAGVAGYLTLVAYDESLLVCGLGDCATVQNSPYAKLGGIPIALLGLLMYLVLLGLGVVRWRLVHQTELLTSANTSIALAGTLFSGYLTYLELFVIHAICQWCVASAVIVTLLLLVEGWGLRQLLRAETSALVSAPAPPRQRRQQPAP
SIO_010081: TRD_RS09900
subclass of: SO_0000673
so part of: TRD_RS09900
location: complement(131104..131598)
location: region:131104-131598:-1
so has part: feature:131104-131598:-1:exon

WP_012642442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131104-131598:-1:exon

TRD_RS09905
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09905
old locus tag: trd_A0141
so part of: sequence
location: complement(131595..132350)
location: region:131595-132350:-1
so has part: feature:131595-132350:-1:exon
subclass of: SO_0000010

position:131595:-1
position: 131595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132350:-1
position: 132350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131595-132350:-1:exon

TRD_RS09905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09905
old locus tag: trd_A0141
inference: COORDINATES: protein motif:HMM:NF024853.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin domain-containing protein
translation: MSSSRENLPPAASQAERVPRRAQRKLEAERRARRRRVLFITVPVVIALVAAGVGIWWSQRSAREVAAVQMPDVSKYTSVPRDGRVLGDPNAPVHVIEWGDYQCPACKSFEQRFFPTILEQYIVTGKVRWEFRDFAFIGKESVRAAEAAACALDQGKFWEFHAALYANQTGENVGAFTDRRLEEIARVAGLDVGAFRSCLRQGKHADEVQQMVREAQSLGVRATPSFSVNGSAPFTIRSLSDLTQRIEEASK
SIO_010081: TRD_RS09905
subclass of: SO_0000673
so part of: TRD_RS09905
location: complement(131595..132350)
location: region:131595-132350:-1
so has part: feature:131595-132350:-1:exon

WP_012643148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131595-132350:-1:exon

TRD_RS09910
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09910
old locus tag: trd_A0143
so part of: sequence
location: 132491..133441
location: region:132491-133441:1
so has part: feature:132491-133441:1:exon
subclass of: SO_0000010

position:132491:1
position: 132491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133441:1
position: 133441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132491-133441:1:exon

TRD_RS09910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09910
old locus tag: trd_A0143
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKENAPTLTACEQKTLEPSWTAALATASGRRWLRRAVLPVLEGSRATALANLLLGFRDDFRCEQRDFSTRAVVERADQATLAANLEWLAGSNAALALWERLAEEGITRLVSAALRVLRRGDTRARELVLTVLVADPTREIVLPPWAERALLVIALVDRDEVVRGLAVETAAGRWPELLLPNWQHWTRDGSGRARRATWRLALRVDARARMQAAALTFAEEEPADVRADALWALGQVLATAEIAPILARVVQHPRPELAEAAAELLWTRHRHPEPARAALASPHPRVREMGKRLLDPRHGSPAAGGSRPGMPFPWW
SIO_010081: TRD_RS09910
subclass of: SO_0000673
so part of: TRD_RS09910
location: 132491..133441
location: region:132491-133441:1
so has part: feature:132491-133441:1:exon

WP_012642918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132491-133441:1:exon

TRD_RS09915
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09915
old locus tag: trd_A0144
so part of: sequence
location: complement(134050..135753)
location: region:134050-135753:-1
so has part: feature:134050-135753:-1:exon
subclass of: SO_0000010

position:134050:-1
position: 134050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135753:-1
position: 135753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134050-135753:-1:exon

TRD_RS09915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09915
old locus tag: trd_A0144
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPDPPLTADEQPERSGDDVRRRGWFWHWNTIITQFAPLIGLKGVGLLNSYTVWTDRREHSPYRGYAFPSQQAEAAFYGEDRAELITINKILVALDLIEIRKEMVTRTDEAGRRWRVPHNFYRVKDRPDGFVLTPEAVLRVVELAARDDAVYRYIRHVFSPRFAPIDRDNVWHQILPVVRQHPLWQKLAARAAAEDARASARTRAGHVRRKRTAASDESATSLSTTVAQSDTAQPADVALSNSGSPTVVASSDDGFPSESRSSVGPANREEASSVAPDDTTYHQGEPTTTTTARDPQEVAEPPAGGAGPLLEPSPHVIACYEAANARPASPLERTLLAELEREFLPLASARGESSAELLVAAIREAVASGSRYVAPKRIREILARWARHAVRSSTATTRAVSSQPASSLASSAVPGLHVDGLLAPDTLDRLVTLLEEALAARLTRSQSSPSQPGGSSLAVSLGNSPSVLERANSEQSAGLAPLWSLAQEHLSERLPASAIAECIRPARLLAASDAGPVVLGVPSATVRRHLERRWLAPVREVLATLLDRPVEIHIVTFAEWEGGNSAS
SIO_010081: TRD_RS09915
subclass of: SO_0000673
so part of: TRD_RS09915
location: complement(134050..135753)
location: region:134050-135753:-1
so has part: feature:134050-135753:-1:exon

WP_041437223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134050-135753:-1:exon

TRD_RS09935
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09935
old locus tag: trd_A0148
so part of: sequence
location: 138489..139259
location: region:138489-139259:1
so has part: feature:138489-139259:1:exon
subclass of: SO_0000010

position:138489:1
position: 138489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139259:1
position: 139259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138489-139259:1:exon

TRD_RS09935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09935
old locus tag: trd_A0148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008479782.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAILLPYRTDPRLLFQVMEYAKGRGIDRSLLEARLGGGEPLRETLNALEQLGLIERDASEIRLTEAGRRLAYATDALERQRELARVVLSYPPYGGVIERALREGLSVIDGPWVERVWQVEMRLGQPRNRVEEARTFFFKLAEEAGLGIFRRGVRGQPSRLVLAPDLEERLRVLRPLLSGGGAESEPVPREPAAVSGVTTVSSELASAPVPERTTAAPAGAAVTITVSVDLTAWELEKIEAFLRLLGVVPGRSEPAP
SIO_010081: TRD_RS09935
subclass of: SO_0000673
so part of: TRD_RS09935
location: 138489..139259
location: region:138489-139259:1
so has part: feature:138489-139259:1:exon

WP_012643208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138489-139259:1:exon

TRD_RS09940
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09940
old locus tag: trd_A0150
so part of: sequence
location: 140094..141065
location: region:140094-141065:1
so has part: feature:140094-141065:1:exon
subclass of: SO_0000010

position:140094:1
position: 140094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141065:1
position: 141065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140094-141065:1:exon

TRD_RS09940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09940
old locus tag: trd_A0150
inference: COORDINATES: protein motif:HMM:NF014665.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
GO process: GO:0006784 - heme A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: COX15/CtaA family protein
translation: MRERVRWVGRLAWANAVAMGLVLLLGATVTATGSGFGCGESWPLCHGRLLPPLTAEGIIEYSHRLATLVSGLVLVALLALTIVERRELFARWETRIVAGLLVGTLLLQSALGAAAVLAPRHPLVMAVHFGVSLTVFASALLLALVLTRGESLRARRRLHVPAGVVRATWGLLIGTYAVVYLGAYVRHSQASLACLDWPLCQGRLIPDLVGPTGVVFLHRLSALVLTLGLVGLVVRLWRDRVLRRERPDLVWSGLVALGLLLAQSVTGAWVVWSRLSLASVLGHAAVVTLLFGTLAVLAYQSLPERALMERAARAPVAGVSVSQ
SIO_010081: TRD_RS09940
subclass of: SO_0000673
so part of: TRD_RS09940
location: 140094..141065
location: region:140094-141065:1
so has part: feature:140094-141065:1:exon

WP_169302307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140094-141065:1:exon

TRD_RS09945
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: rsgA
locus tag: TRD_RS09945
old locus tag: trd_A0151
so part of: sequence
location: 141094..142083
location: region:141094-142083:1
so has part: feature:141094-142083:1:exon
subclass of: SO_0000010

position:141094:1
position: 141094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142083:1
position: 142083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141094-142083:1:exon

TRD_RS09945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: rsgA
locus tag: TRD_RS09945
old locus tag: trd_A0151
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008481243.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome small subunit-dependent GTPase A
translation: MTEEADHPGDAWPANIVIRVRGPYYDVLTPEGVLRCVVRGALKKERRREDLVVVGDRVVVRVVAPGEGVIEAVAPRRRALVRRARDREAAQVIVANLDQLVVVMAAAQPELSLGMLDRFLVVAESQDLPTVICLNKIDLDPAGRARAMLAPYRAIGYPVVETSVASGAGLHELWQTIEGKLSALAGPSGVGKTSLVKAFRPDLELRIGAVSEATGRGRHTTTASELIQLDERTFLVDTPGIGVLHLWAILPEELDRCFREFRPYLGACPYRDCRHLDEPGCAVRAAVEAGVIDAGRYERYRALYQDLVQEMERYGRWEIERLWRGRRAR
SIO_010081: TRD_RS09945
subclass of: SO_0000673
so part of: TRD_RS09945
location: 141094..142083
location: region:141094-142083:1
so has part: feature:141094-142083:1:exon

WP_012643115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141094-142083:1:exon

TRD_RS09950
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09950
old locus tag: trd_A0152
so part of: sequence
location: 142080..142559
location: region:142080-142559:1
so has part: feature:142080-142559:1:exon
subclass of: SO_0000010

position:142080:1
position: 142080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142559:1
position: 142559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142080-142559:1:exon

TRD_RS09950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09950
old locus tag: trd_A0152
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873532.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DinB family protein
translation: MSDELVSTVRAAVESTLREQHQVLRELVQGLSPAVLNWSPGPEMNTIAVLVAHLLDAERYLVAAALGEVVERDRERWFRYEAPSALALLELIDQTEQETSERLTRLTGDALAREWSPPNDRLGRRFSGMRWLLHAIQHNREHIGQALLTRQLAAQGGIG
SIO_010081: TRD_RS09950
subclass of: SO_0000673
so part of: TRD_RS09950
location: 142080..142559
location: region:142080-142559:1
so has part: feature:142080-142559:1:exon

WP_012642841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142080-142559:1:exon

TRD_RS09955
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09955
old locus tag: trd_A0153
so part of: sequence
location: complement(142822..143601)
location: region:142822-143601:-1
so has part: feature:142822-143601:-1:exon
subclass of: SO_0000010

position:142822:-1
position: 142822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143601:-1
position: 143601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142822-143601:-1:exon

TRD_RS09955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09955
old locus tag: trd_A0153
inference: COORDINATES: protein motif:HMM:NF019349.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FadR/GntR family transcriptional regulator
translation: MTRAIPVTAKPITQARLHQRVVEELLRQIVSGALPPGTTLPSEPELARQFGVSRIVIREAIRILVEKGLITVRHGSGMWVQSIEQWNHLDPMVLLEEVRSSPDASRLSELLELCEILDVGAAERAATRRTPEQLSRLRDLVERMRKVVDDPAAYLDLDALFHATIAESAGNRLLRDAQRPLSEVLFANWLWATRAPEELTRFQQDHEAIYEAIAAGDPLGARQAMHRHAQHVASALRAGIAPAAGELVTTGSDGRHAAA
SIO_010081: TRD_RS09955
subclass of: SO_0000673
so part of: TRD_RS09955
location: complement(142822..143601)
location: region:142822-143601:-1
so has part: feature:142822-143601:-1:exon

WP_012643022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142822-143601:-1:exon

TRD_RS13820
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13820
old locus tag: trd_A0155
so part of: sequence
location: complement(143988..146300)
location: region:143988-146300:-1
so has part: feature:143988-146300:-1:exon
subclass of: SO_0000010

position:143988:-1
position: 143988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146300:-1
position: 146300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143988-146300:-1:exon

TRD_RS13820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13820
old locus tag: trd_A0155
inference: COORDINATES: protein motif:HMM:NF012301.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MPERAIRILLVDDHALFRQGLRQLLATTPDIVVVGEAGSASEAFELVPQLAPDVVLMDIAMPGLDGIAATAALRQRFPTLRVVMLTMYEPTTSGEAARAAGAIAYVVKSSRPEELFAAIRAAANGAIPPNGEVRAGQSPPPPGRDTADRVAQLEQRLAWLEAQLAQLGVREPLPPSHAPAEPVMSAPPADQPIAPSPPVGAVSRHPVWQPSIGTARAADTMPTPRSVSPQPLPVALTQLANSLLLGILVVGELVALASALLLFPSPILARWITLGAGQLASLALITLVALAPQRRSEGQIVLLVALTAAMAWSLLTARSAPVALQAAALAGTSSLALAALALSWQRRFLLAAALSLALITVLPSLLAIIPGALAPLWVTGTVALASGLAWSRLRRPSDPVAWEWLPLAPLALGTPLLLVWLESGGRPALLLAAPWIAAFPPLVAAGKAQRPVLRALLALHGALALGTVGWLFRTAAHSEQAAALAVLAVLASALALLLWWSGQRAGASTAPAVVPAAFAGLSLALAAARHPEPVLAPLVWCTLGLVLAALPSRCTWSTWIALALFAGGCGAALLAVLRSPDWQRWSLLVLVLGTATMTGPFLAPRWWFVTGWLGSGVLALAALLALRLTGLVEIAALSGLALGTLVVTRYIVPRLDHPTGAWVWLPTLGASASALASALTGPLSPGRLGIALQPAVSATSEPVIAASMLVAAALAAGRLLGRRWRWAAIAIALLLIAYVLPAVVPDAALVLSWSALAVALAHALGIRLRP
SIO_010081: TRD_RS13820
subclass of: SO_0000673
so part of: TRD_RS13820
location: complement(143988..146300)
location: region:143988-146300:-1
so has part: feature:143988-146300:-1:exon

WP_012642735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143988-146300:-1:exon

TRD_RS09970
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: alr
locus tag: TRD_RS09970
old locus tag: trd_A0156
so part of: sequence
location: complement(146373..147674)
location: region:146373-147674:-1
so has part: feature:146373-147674:-1:exon
subclass of: SO_0000010

position:146373:-1
position: 146373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147674:-1
position: 147674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146373-147674:-1:exon

TRD_RS09970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: alr
locus tag: TRD_RS09970
old locus tag: trd_A0156
EC number: 5.1.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873522.1
GO function: GO:0008784 - alanine racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine racemase
translation: MGTQRDPGLGDPNQHDASALPAATEQVDWPTRLSCARAGLHAIIDLDQLATNARTLVRFLPPDVELLAVLKANAYGHGLVPSALAALAGGARWLGVARIEEGLLLRQAGLTAPVIVLGPPNHARLRAAVAADLTLAVGSLADVEAVRSAASALGRPARVHLEVDTGMHRFGATPDEAVALARGLASDPLLSFEGIYTHFATADAPDCRTLRRQMERFRAVRERLLAEGIHPPVVHQANSAATLRGALGDPDLPGRRVVRVGILFYGLTPDPALLLPPGIRPALTLQARLARCFVVHAGEGISYGHTYVTKALTHCGLVPVGYADGLPRALSNQGWFLVQGQRCPILGRVCMDQTTISLEAVPQAEIGTTVIVLGTGEDGAMTAWDAATLSGTIAYEILTSLATRIPRLYQRGGEIVGLADAFGLVWRDRMRAR
SIO_010081: TRD_RS09970
subclass of: SO_0000673
so part of: TRD_RS09970
location: complement(146373..147674)
location: region:146373-147674:-1
so has part: feature:146373-147674:-1:exon

WP_012643277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146373-147674:-1:exon

TRD_RS14250
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14250
old locus tag: trd_A0157
so part of: sequence
location: 147821..148009
location: region:147821-148009:1
so has part: feature:147821-148009:1:exon
subclass of: SO_0000010

position:147821:1
position: 147821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148009:1
position: 148009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147821-148009:1:exon

TRD_RS14250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14250
old locus tag: trd_A0157
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASTAVLTAGVDDPGITVIIARRALLARPGRRVRHRLTPTTWGITHHPLAYRSHRQHAAPTV
SIO_010081: TRD_RS14250
subclass of: SO_0000673
so part of: TRD_RS14250
location: 147821..148009
location: region:147821-148009:1
so has part: feature:147821-148009:1:exon

WP_012642736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147821-148009:1:exon

TRD_RS09975
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09975
old locus tag: trd_A0158
so part of: sequence
location: complement(149598..151214)
location: region:149598-151214:-1
so has part: feature:149598-151214:-1:exon
subclass of: SO_0000010

position:149598:-1
position: 149598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151214:-1
position: 151214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149598-151214:-1:exon

TRD_RS09975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09975
old locus tag: trd_A0158
inference: COORDINATES: protein motif:HMM:NF014795.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine pyrophosphate-binding protein
translation: MATVAEVIAQELRTAGVDRAFGLPGGEVLALIDALRRAGIVFTLCRHEAVAGIAAGVYGKLRRTAGVAVATLGPGAANFLLAVSNAWLDREPLLAITADLPASWPPSHTHQRLPLHDIYRPVTKHVEAVTPLDPHRPVRRALIACTREPLGPSYLTLSAEDAVRPACILHEESLALRPAATAQDARVAAEELARRLAEAERPLVVIGLGVRPENAPGLRRWLAAWHLPVAVTPKAKGLVDERDPAIDFVGVVGGMAIDGLMVEAVQQADLLVGFGFDPVEVDKTWHAHRPVLWVLESAQATGLLPRRDLLLVDHHALLAALGELAPPRRWERPFQEVQAERAAIAAGKSRAPAQGLAPVRIVEVLAAVLPAETIVTTDVGSHKYLFGQFWPSRHPETFWMSNGLSGMGYGLAAAIGAKLARPAAPVLAVLGDGGFSMVCQELETARRIGAPVIVLIIADRSYSLIRIGQENRGLPRYGVDFEPIDSVLVAQACGCAGTVARTPDELAAAARQALAANEAGLPFVIEVPLDPDAYRPIV
SIO_010081: TRD_RS09975
subclass of: SO_0000673
so part of: TRD_RS09975
location: complement(149598..151214)
location: region:149598-151214:-1
so has part: feature:149598-151214:-1:exon

WP_012643029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149598-151214:-1:exon

TRD_RS09980
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09980
old locus tag: trd_A0160
so part of: sequence
location: complement(151378..151845)
location: region:151378-151845:-1
so has part: feature:151378-151845:-1:exon
subclass of: SO_0000010

position:151378:-1
position: 151378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151845:-1
position: 151845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151378-151845:-1:exon

TRD_RS09980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09980
old locus tag: trd_A0160
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTHDQEPYARGIVPERPFAAVRPLVGELVAVLAVSFPDRNLELEPFGSRAFPDGAIAELCVTDQPDARPGQRVARAAYLGFVRFPIGGIVAVGARCSVAGEEIGEVVGFDGVHAPNHWNIVVRSARFADGAARGLRLGATVTLSGPATASELDSP
SIO_010081: TRD_RS09980
subclass of: SO_0000673
so part of: TRD_RS09980
location: complement(151378..151845)
location: region:151378-151845:-1
so has part: feature:151378-151845:-1:exon

WP_012642827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151378-151845:-1:exon

TRD_RS09985
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09985
old locus tag: trd_A0162
so part of: sequence
location: 151961..153001
location: region:151961-153001:1
so has part: feature:151961-153001:1:exon
subclass of: SO_0000010

position:151961:1
position: 151961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153001:1
position: 153001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151961-153001:1:exon

TRD_RS09985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09985
old locus tag: trd_A0162
inference: COORDINATES: protein motif:HMM:NF017365.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: proline racemase family protein
translation: MFGQARHVLQVWDYHHGQSTRIVVAGCPPLRGRTIREKQADLATRYDHLRALIVREPRGHRNLLGAFLTEPERPESQAGVIFVHPDGYFDACGDSTFSVAVALVESGLVPRTTDDGEQELVLDTVLGPVPVRVTLRGGRVVAATMASGPSYALGSARLETELGTVPVTLAWGGLLYAFADATALGLQLGAELAPATRERLLDVGTMLWQAARAQLRADVPGLAQGRAVDLVTLVQELDEHGRPLPAGSTAQPAGARVANFYAPRTMGRTPSGTGTAARVAALVASGRLPLGASYFHESPVGLRFTARPVRREGEAVHSEISTMSYCMGIATLVLRDDDPFPTGFLL
SIO_010081: TRD_RS09985
subclass of: SO_0000673
so part of: TRD_RS09985
location: 151961..153001
location: region:151961-153001:1
so has part: feature:151961-153001:1:exon

WP_012642479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151961-153001:1:exon

TRD_RS09990
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS09990
old locus tag: trd_A0164
so part of: sequence
location: 153718..153957
location: region:153718-153957:1
so has part: feature:153718-153957:1:exon
subclass of: SO_0000010

position:153718:1
position: 153718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153957:1
position: 153957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153718-153957:1:exon

TRD_RS09990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS09990
old locus tag: trd_A0164
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERVVEHQDRTQGERRGDRAIGRVASRPACSANSLPLFPVRHSPAERGTSALVLALVRQGRCLATHGAQPDKRGTKRSA
SIO_010081: TRD_RS09990
subclass of: SO_0000673
so part of: TRD_RS09990
location: 153718..153957
location: region:153718-153957:1
so has part: feature:153718-153957:1:exon

WP_012643249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153718-153957:1:exon

TRD_RS09995
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: lysX
locus tag: TRD_RS09995
old locus tag: trd_A0165
so part of: sequence
location: 154022..154894
location: region:154022-154894:1
so has part: feature:154022-154894:1:exon
subclass of: SO_0000010

position:154022:1
position: 154022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154894:1
position: 154894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154022-154894:1:exon

TRD_RS09995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: lysX
locus tag: TRD_RS09995
old locus tag: trd_A0165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873383.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysine biosynthesis protein LysX
translation: MRVGLVYGLLRAEERLLIAALEQRGAVVERIVDRQLRLELTSPPPRYDVVVERSVSQQRGLHVASVFAAWGIPVVNPPHLLEVCNDKLRTTALLAAAGVPQPRVMVAFSPEEALEAAEELGYPVVIKPPLGSWGRLLARVHSRRAAAELLRHKRMLGGFHHGTLYVQEWVPKPGRDIRAFVVGEETICAIYRTSDHWVTNTARGGRASNCPVTPELADLCGRVARALGGGVLAVDVLEHPERGLLVNEVNATMEFRNSIAPTGVDIPGRVADYVLAIARAEQPLSLAAAS
SIO_010081: TRD_RS09995
subclass of: SO_0000673
so part of: TRD_RS09995
location: 154022..154894
location: region:154022-154894:1
so has part: feature:154022-154894:1:exon

WP_041437495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154022-154894:1:exon

TRD_RS10000
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10000
old locus tag: trd_A0166
so part of: sequence
location: 155152..155589
location: region:155152-155589:1
so has part: feature:155152-155589:1:exon
subclass of: SO_0000010

position:155152:1
position: 155152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155589:1
position: 155589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155152-155589:1:exon

TRD_RS10000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10000
old locus tag: trd_A0166
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDEPMQPPAIGPARQVDIETAGWIALALEAIFGYFGILGVGHAYAGRLGRAIGLLVGWLVVLVLLGALTGLTFGVAACLVLPIWVAVPVISGLLARRTVLAEGRTGSWTAVFGLAGVGCLGVLTLICLGLVLLGGLGALSSAVSG
SIO_010081: TRD_RS10000
subclass of: SO_0000673
so part of: TRD_RS10000
location: 155152..155589
location: region:155152-155589:1
so has part: feature:155152-155589:1:exon

WP_012643004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155152-155589:1:exon

TRD_RS13825
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13825
old locus tag: trd_A0169
so part of: sequence
location: 156700..157626
location: region:156700-157626:1
so has part: feature:156700-157626:1:exon
subclass of: SO_0000010

position:156700:1
position: 156700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157626:1
position: 157626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156700-157626:1:exon

TRD_RS13825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13825
old locus tag: trd_A0169
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAFTVEDFQDLVRLLAQHPEWRSELRRLLLSEELLTVPERLARVERLLAELVQRDEERSRQLAGLIEAVRENTRQIAELRETVAEHSRQIAELRETVAEHSRQIAELRETVAEHSRQIAELRETVAEHSRQIAEQTRQIEGLRETVLLLAQRLDTVAGRTDMALGELLELRAERRLSSWLGRFLRGLRVRPPGEWERQFRPLLSPAAFDRLLDADLLARGRLTLDGQREVWLAIEVSRVIDAEDVARAQEWAQLLREVGLVAVPVVLGAALTGEAQEAVERERVLFVEATLQRVWVHGWEAVRERWVA
SIO_010081: TRD_RS13825
subclass of: SO_0000673
so part of: TRD_RS13825
location: 156700..157626
location: region:156700-157626:1
so has part: feature:156700-157626:1:exon

WP_012642549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156700-157626:1:exon

TRD_RS10010
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10010
old locus tag: trd_A0170
so part of: sequence
location: complement(157746..158489)
location: region:157746-158489:-1
so has part: feature:157746-158489:-1:exon
subclass of: SO_0000010

position:157746:-1
position: 157746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158489:-1
position: 158489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157746-158489:-1:exon

TRD_RS10010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10010
old locus tag: trd_A0170
inference: COORDINATES: protein motif:HMM:NF013245.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MRSLVRLTLTEFLLELREPFSAFFSLVFPPLLVVIFGSIYGNTPRPGSGGFGVIDLAVPGYVTMVIATVAIFNLPIALATYRERGVLRQLALAPVSPIALFASQLAARAILSALGISFLLLTAELGYGLRFAGSLPSALAAGILGFLAMMAFGFALAALVPSARTALVVAFVVFYPMLFFSGMALPPEILPARVRELAEFLPATPIVTLLRAAWVAEPWSDHWRALLLLAAWTTGSLAIATRRFRWQ
SIO_010081: TRD_RS10010
subclass of: SO_0000673
so part of: TRD_RS10010
location: complement(157746..158489)
location: region:157746-158489:-1
so has part: feature:157746-158489:-1:exon

WP_012642768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157746-158489:-1:exon

TRD_RS10015
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10015
old locus tag: trd_A0171
so part of: sequence
location: complement(158493..159413)
location: region:158493-159413:-1
so has part: feature:158493-159413:-1:exon
subclass of: SO_0000010

position:158493:-1
position: 158493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159413:-1
position: 159413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158493-159413:-1:exon

TRD_RS10015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10015
old locus tag: trd_A0171
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003997758.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MNVVEVAELRKTYGQVVAVAGVSFTVQDGEIFGIVGPNGAGKTTTIECLEGLRRPDAGAVRVLGHDPWRERRRLAPQIGVQLQESALPDRLRVGEAIALFASLYPKTLDPRPLLEQLGLSQQLRTPIAKLSGGQKQRLFLLLALLHDPRLLFLDELSTGLDPHGRRAVWQLVRATRARGTTILLSTHLMDEAEELCDRVAVFHQGRIVALDTPSRLIARIVGSLRVSVRIPEGAPLPPLQSLPGVRQVRREDGTLIVHADDDRTVAAVVHLLVEHRVPLRELRVSSGRLEDAYLALTGTAVTREEQ
SIO_010081: TRD_RS10015
subclass of: SO_0000673
so part of: TRD_RS10015
location: complement(158493..159413)
location: region:158493-159413:-1
so has part: feature:158493-159413:-1:exon

WP_012642663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158493-159413:-1:exon

TRD_RS10020
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10020
old locus tag: trd_A0172
pseudo: true
so part of: sequence
location: complement(<159482..159766)
location: region:159482-159766:-1
so has part: feature:159482-159766:-1:exon
subclass of: SO_0000010

position:159482:-1
position: 159482
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:159766:-1
position: 159766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159482-159766:-1:exon

TRD_RS10020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10020
old locus tag: trd_A0172
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003047308.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transcriptional regulator
SIO_010081: TRD_RS10020
subclass of: SO_0000673
so part of: TRD_RS10020
location: complement(<159482..159766)
location: region:159482-159766:-1
so has part: feature:159482-159766:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159482-159766:-1:exon

TRD_RS10025
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10025
old locus tag: trd_A0173
so part of: sequence
location: complement(159753..160319)
location: region:159753-160319:-1
so has part: feature:159753-160319:-1:exon
subclass of: SO_0000010

position:159753:-1
position: 159753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160319:-1
position: 160319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159753-160319:-1:exon

TRD_RS10025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10025
old locus tag: trd_A0173
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHQPELEEALTTIARTQQAVRRAVLRWTLAPSLAAWGLVWLIGFPASLLLAGDALTLLWIGLVALGLAVSFGTQFLTARRLRSPQGRRLGLSWAVASGYLGLWASLLFPRDPELASFVLVTAIMAGYVLYGIWITPFMAILGLFVTAVAVVGHLLGPAPYALLVGLLGGSALIAGGLRVWWSSRDDAR
SIO_010081: TRD_RS10025
subclass of: SO_0000673
so part of: TRD_RS10025
location: complement(159753..160319)
location: region:159753-160319:-1
so has part: feature:159753-160319:-1:exon

WP_012643035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159753-160319:-1:exon

TRD_RS10030
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: mmgD
locus tag: TRD_RS10030
pseudo: true
so part of: sequence
location: 160636..161758
location: region:160636-161758:1
so has part: feature:160636-161758:1:exon
subclass of: SO_0000010

position:160636:1
position: 160636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161758:1
position: 161758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160636-161758:1:exon

TRD_RS10030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: mmgD
locus tag: TRD_RS10030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006639573.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: citrate synthase
SIO_010081: TRD_RS10030
subclass of: SO_0000673
so part of: TRD_RS10030
location: 160636..161758
location: region:160636-161758:1
so has part: feature:160636-161758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160636-161758:1:exon

TRD_RS10035
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10035
old locus tag: trd_A0176
so part of: sequence
location: 161784..163229
location: region:161784-163229:1
so has part: feature:161784-163229:1:exon
subclass of: SO_0000010

position:161784:1
position: 161784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163229:1
position: 163229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161784-163229:1:exon

TRD_RS10035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10035
old locus tag: trd_A0176
EC number: 4.2.1.3
EC number: 4.2.1.79
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006903200.1
GO function: GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0047547 - 2-methylcitrate dehydratase activity [Evidence IEA]
GO process: GO:0019679 - propionate metabolic process, methylcitrate cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional 2-methylcitrate dehydratase/aconitate hydratase
translation: MGETGSGARPAPDAVLVEIARYVLETEIASPVAAEAARLALADSLACACEALVHPDCTELIGPVAPGTIVPGGVRVPGTSLVLDPVGGAFAISALIRWLDYNDTWLAKEWGHPSDNFGAILAVADYVSRQRRARGEQPYRVRDVLTAAIKAYEIQGVLALENSLNRVGFDHVQFVKVASAAVAAALWGGGFAEVVSAVSNAWVDGPALRTYRHFPNTGPRKSWAAADATSRAVRLAWLALRGEPGYPTALSAPQWGFQDVVLRGQPVVLARPLGSYVMENVLFKIAFPAEFHGQTAVEAALRLHPLVRDRLEEIAEIVIETQESAKRIIDKPGPFANPADRDHSLQYMTAVALLYGELRYEHYLEPIASDPRIPALIAKMRVIENPEFSRDYLDPEKRSIANAVQVVFRDGSRTERVLVEYPIGHPRRRAEGLPLLRQKLARALRLVYPERRAAALEHLLLDDPGLPDLAVDQLLDALHRG
SIO_010081: TRD_RS10035
subclass of: SO_0000673
so part of: TRD_RS10035
location: 161784..163229
location: region:161784-163229:1
so has part: feature:161784-163229:1:exon

WP_012642879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161784-163229:1:exon

TRD_RS10040
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: prpB
locus tag: TRD_RS10040
old locus tag: trd_A0177
so part of: sequence
location: 163233..164156
location: region:163233-164156:1
so has part: feature:163233-164156:1:exon
subclass of: SO_0000010

position:163233:1
position: 163233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164156:1
position: 164156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163233-164156:1:exon

TRD_RS10040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: prpB
locus tag: TRD_RS10040
old locus tag: trd_A0177
EC number: 4.1.3.30
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010496143.1
GO function: GO:0046421 - methylisocitrate lyase activity [Evidence IEA]
GO process: GO:0019629 - propionate catabolic process, 2-methylcitrate cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methylisocitrate lyase
translation: MSWIRQQPRAQRELAQAFRDRVAAGLVVLPGVYDGLSALSARAAGFPALYLSGAALTASRGLPDLGMIGLEEVVERAREIVRATELPLIVDIDTGYGGVLNAARAARELVEARVAGVQIEDQQQPKKCGHLSAKLLAPAEELEQKVRAIKAVAPDLYVIARTDAYEQEGLEGVVARARRYLAAGADAIFPEALPSEEVFRAVAEALPGVTLLANLTEFGRTPAFTAAQVADWGYRIALFPVSALRVAAKAMERLYRTLAAEGTTRGLVGEMQTRAELYELLGYFAYEEFDTTLARSTLPEWELGREG
SIO_010081: TRD_RS10040
subclass of: SO_0000673
so part of: TRD_RS10040
location: 163233..164156
location: region:163233-164156:1
so has part: feature:163233-164156:1:exon

WP_012643194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163233-164156:1:exon

TRD_RS15225
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS15225
so part of: sequence
location: complement(164242..164376)
location: region:164242-164376:-1
so has part: feature:164242-164376:-1:exon
subclass of: SO_0000010

position:164242:-1
position: 164242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164376:-1
position: 164376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164242-164376:-1:exon

TRD_RS15225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS15225
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLAVDPGLFGGELLHIPAEWIDSVTEEAVHLTVDAATARRGRR
SIO_010081: TRD_RS15225
subclass of: SO_0000673
so part of: TRD_RS15225
location: complement(164242..164376)
location: region:164242-164376:-1
so has part: feature:164242-164376:-1:exon

WP_264353693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164242-164376:-1:exon

TRD_RS14885
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14885
old locus tag: trd_A0179
so part of: sequence
location: 164570..164803
location: region:164570-164803:1
so has part: feature:164570-164803:1:exon
subclass of: SO_0000010

position:164570:1
position: 164570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164803:1
position: 164803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164570-164803:1:exon

TRD_RS14885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14885
old locus tag: trd_A0179
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLEHVFGTIEDPLLIAQDRNFPTRECYYRAASELGLPIAAYLKVVVDRGWHPARVVTAYPVDRLHRSEEPVWRREQ
SIO_010081: TRD_RS14885
subclass of: SO_0000673
so part of: TRD_RS14885
location: 164570..164803
location: region:164570-164803:1
so has part: feature:164570-164803:1:exon

WP_041437232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164570-164803:1:exon

TRD_RS10050
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10050
old locus tag: trd_A0180
so part of: sequence
location: 164800..165165
location: region:164800-165165:1
so has part: feature:164800-165165:1:exon
subclass of: SO_0000010

position:164800:1
position: 164800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165165:1
position: 165165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164800-165165:1:exon

TRD_RS10050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10050
old locus tag: trd_A0180
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVYEYRPKVPSRDQLRESMRTGSLRVVFDPTADELLVFWRECERPAVSIFLTEPDWLALLVDPDTHEVIGFHIEAFRQRAVREVPELSAVLAHAARDGESAAQGTAETLAALLGRSATAA
SIO_010081: TRD_RS10050
subclass of: SO_0000673
so part of: TRD_RS10050
location: 164800..165165
location: region:164800-165165:1
so has part: feature:164800-165165:1:exon

WP_012643217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164800-165165:1:exon

TRD_RS10055
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10055
old locus tag: trd_A0181
so part of: sequence
location: complement(165268..165963)
location: region:165268-165963:-1
so has part: feature:165268-165963:-1:exon
subclass of: SO_0000010

position:165268:-1
position: 165268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165963:-1
position: 165963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165268-165963:-1:exon

TRD_RS10055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10055
old locus tag: trd_A0181
inference: COORDINATES: protein motif:HMM:NF017088.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PRC-barrel domain-containing protein
translation: MHIELGRPVMSRDGKRIGTVDQLVLDPDTREVRAIIVHRGLLLTEDRLVDRAVIDTVAPDGTVWLALDAEQAHELPLFVEEEFVRLTNEEAATLPYVWPSGGGLGPVPLLWGAPAREPVIPEPRIAPYDPSGGTLPSSTAPTPAPVEVATNLPPDTVRIDRGTAVIASDGTRLGKVEHVHLNEDGEIVSLAVDPGLFGGEPLHIPAEWIDSVTEEAVHLTVDAATARRGRR
SIO_010081: TRD_RS10055
subclass of: SO_0000673
so part of: TRD_RS10055
location: complement(165268..165963)
location: region:165268-165963:-1
so has part: feature:165268-165963:-1:exon

WP_012643058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165268-165963:-1:exon

TRD_RS10060
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10060
old locus tag: trd_A0182
so part of: sequence
location: 166101..166556
location: region:166101-166556:1
so has part: feature:166101-166556:1:exon
subclass of: SO_0000010

position:166101:1
position: 166101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166556:1
position: 166556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166101-166556:1:exon

TRD_RS10060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10060
old locus tag: trd_A0182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873416.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional repressor
translation: MRAIMRTAETILETMHQRGWRITGPRRAIVEYVLAQDGPFSAEEIFRALRRRQPTIGRATVFRTLDLLAELGVVERIHHPSGVHRYVVGGDGHRHHVVCIRCGAVAEFAGCNLETVLAQVADQTRFRILGHWLEVSGLCQLCQREPAVSSS
SIO_010081: TRD_RS10060
subclass of: SO_0000673
so part of: TRD_RS10060
location: 166101..166556
location: region:166101-166556:1
so has part: feature:166101-166556:1:exon

WP_226980751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166101-166556:1:exon

TRD_RS10065
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10065
old locus tag: trd_A0183
so part of: sequence
location: 166730..167683
location: region:166730-167683:1
so has part: feature:166730-167683:1:exon
subclass of: SO_0000010

position:166730:1
position: 166730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167683:1
position: 167683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166730-167683:1:exon

TRD_RS10065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10065
old locus tag: trd_A0183
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873415.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter substrate-binding protein
translation: MHRRWTVLGLLVLAGLLVAACGQSATPTVQPAAMPSGQRVVVVTSLPIFATMVEAVGGDLVSVSAVLPPGTDPHTYQPAPRDVAKLAQAALVVYNGGDLDPWMERQLEAVGSRARVVALSAGLEPPPGIEAGHEHEHEGTPEAEHEQGVNPHFWLDPDFGIVYVERIAEALAEVDPAHAETYRANAERYSQEIRTFDEWAKGQIATIPPERRKLVTFHDAFPYFAAHYGLELVGVVILSPGREPSPQEVAQLVERIRQEGVPAIFVEPQFNPKLAQTIAQEAGVRVLELYSDAAPAGLDYLGMMRQNVTNVVEGLRG
SIO_010081: TRD_RS10065
subclass of: SO_0000673
so part of: TRD_RS10065
location: 166730..167683
location: region:166730-167683:1
so has part: feature:166730-167683:1:exon

WP_226980752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166730-167683:1:exon

TRD_RS10070
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10070
old locus tag: trd_A0184
so part of: sequence
location: 167683..168507
location: region:167683-168507:1
so has part: feature:167683-168507:1:exon
subclass of: SO_0000010

position:168507:1
position: 168507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167683-168507:1:exon

TRD_RS10070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10070
old locus tag: trd_A0184
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873414.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter ATP-binding protein
translation: MQRGTAAPERAAREATALAITVEGLTTGYRRGEPILRGVSFAVERGSLVGVLGPNGSGKSTLFRALLGLLPPWQGRVLVEGKPARPNPDIAYIPQRETIDWDFPVTVLDVTLMGRYPRLGLFRRPGKADRELALWALEQVGMLEFRDRLIVELSGGQRQRVFLARALAQEPEIFLLDEPVSGVDAPTQHFVFELLERLCRQGKTALVATHDLSCVAQRFDRVLLLNHEVIAYGPPQEVFTETLLNRTFQSHLLLLRYGDRVIVVESEDGDERSC
SIO_010081: TRD_RS10070
subclass of: SO_0000673
so part of: TRD_RS10070
location: 167683..168507
location: region:167683-168507:1
so has part: feature:167683-168507:1:exon

WP_012642692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167683-168507:1:exon

TRD_RS10075
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10075
old locus tag: trd_A0185
so part of: sequence
location: 168491..169348
location: region:168491-169348:1
so has part: feature:168491-169348:1:exon
subclass of: SO_0000010

position:168491:1
position: 168491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169348:1
position: 169348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168491-169348:1:exon

TRD_RS10075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10075
old locus tag: trd_A0185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008479616.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter permease
translation: MSGVVDLLLEPLRYGFLLRALVAAVLVGTLCALVGSYVVLKGLAFIGDALAHVAFTGIVVAFLAGFSFYLGALAAAVTAGLGIGWVTRRVGLSTDTAIGIVFSGLFALGVVLMAIGIRTYTVDLFSYVFGDILAVRSRDLLAIGLAGAVVLVTMLLLYKELLFAHFDPVVAEAAGLPVGALQLLLLLLLSVTVVVSVQAVGVVLVLAMLVTPAATAALVARRMPSMMALAVVFGAVAAAVGFYLSYYLSVPSGGAIVLVATLFFALVAGVVRGRGAWRRLMAARS
SIO_010081: TRD_RS10075
subclass of: SO_0000673
so part of: TRD_RS10075
location: 168491..169348
location: region:168491-169348:1
so has part: feature:168491-169348:1:exon

WP_012642578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168491-169348:1:exon

TRD_RS10080
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10080
old locus tag: trd_A0187
so part of: sequence
location: 169637..170041
location: region:169637-170041:1
so has part: feature:169637-170041:1:exon
subclass of: SO_0000010

position:169637:1
position: 169637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170041:1
position: 170041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169637-170041:1:exon

TRD_RS10080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10080
old locus tag: trd_A0187
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012642466.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SaoD/DsrE family protein
translation: MRVAYVFATPRAASYKLGQMILPQLEAGTHGVEVVGMFFFDDNVFVLRAGDPIGERLARIAQGKGILLMMCDMCALERHLAEGQPRWCDPVTGRGRTEPAEIRPVGTVAGVQVGCFPDLYAALAQNPPDQVITL
SIO_010081: TRD_RS10080
subclass of: SO_0000673
so part of: TRD_RS10080
location: 169637..170041
location: region:169637-170041:1
so has part: feature:169637-170041:1:exon

WP_012642466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169637-170041:1:exon

TRD_RS10085
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10085
old locus tag: trd_A0188
so part of: sequence
location: complement(170121..170516)
location: region:170121-170516:-1
so has part: feature:170121-170516:-1:exon
subclass of: SO_0000010

position:170121:-1
position: 170121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170516:-1
position: 170516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170121-170516:-1:exon

TRD_RS10085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10085
old locus tag: trd_A0188
inference: COORDINATES: protein motif:HMM:NF039977.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6069 family protein
translation: MLLLRYGVVAAVLAAIVNAVLWAIARAVGVSLRVQPPGQPESEIGLPQVVILTIVPLLAGTAFYALLRRWTRRPFLIFFIVALVVFAVLLVPPFAATERPGTRFLLILMHVVATLAILAGLYQFERRRARL
SIO_010081: TRD_RS10085
subclass of: SO_0000673
so part of: TRD_RS10085
location: complement(170121..170516)
location: region:170121-170516:-1
so has part: feature:170121-170516:-1:exon

WP_012643160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170121-170516:-1:exon

TRD_RS10090
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10090
old locus tag: trd_A0190
so part of: sequence
location: complement(171723..172175)
location: region:171723-172175:-1
so has part: feature:171723-172175:-1:exon
subclass of: SO_0000010

position:171723:-1
position: 171723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172175:-1
position: 172175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171723-172175:-1:exon

TRD_RS10090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10090
old locus tag: trd_A0190
inference: COORDINATES: protein motif:HMM:NF017394.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrous oxide reductase accessory protein NosL
translation: MTRRLFLMVLLGSLSAGACRRQKALTPPEIRLGRDVCSECGMIISDRRFAAAAATANGDTTLFDDIGCLLTYRQKYSPAWAAIWVHDFESQTWMDAPAARYLVSSGVRSPMGWGIAAFADPSMAEAQQRELGGELVTWDELLARPLQRPR
SIO_010081: TRD_RS10090
subclass of: SO_0000673
so part of: TRD_RS10090
location: complement(171723..172175)
location: region:171723-172175:-1
so has part: feature:171723-172175:-1:exon

WP_012643053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171723-172175:-1:exon

TRD_RS10095
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10095
old locus tag: trd_A0191
so part of: sequence
location: complement(172172..172999)
location: region:172172-172999:-1
so has part: feature:172172-172999:-1:exon
subclass of: SO_0000010

position:172172:-1
position: 172172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172999:-1
position: 172999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172172-172999:-1:exon

TRD_RS10095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10095
old locus tag: trd_A0191
inference: COORDINATES: protein motif:HMM:NF024091.2
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MGGKAFVVLAQKELRDAFRNRWFIADALALLILSLALSLLVSLTGAASPVSGFGRTAASLVNLMLLLVPLMGITLGALAIAGDRERGALEFWLTQPVSTATFFLAKALGMGAALAAAVLVGFGASSVVLLLVGATDPFAFLALAGLTVLLAWASLALGLLLSSRCARTSTAVSLGLGAWLLLVLLGDLGLMGTALAVRLPPAWLLAIALGNPVETYRIAALRLLAGTLELLGPAGLYADERFGASLWILLPTTLLLWIAAGTGFAYIVLRREVSR
SIO_010081: TRD_RS10095
subclass of: SO_0000673
so part of: TRD_RS10095
location: complement(172172..172999)
location: region:172172-172999:-1
so has part: feature:172172-172999:-1:exon

WP_012642952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172172-172999:-1:exon

TRD_RS13830
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: nosD
locus tag: TRD_RS13830
old locus tag: trd_A0192
so part of: sequence
location: complement(172989..175340)
location: region:172989-175340:-1
so has part: feature:172989-175340:-1:exon
subclass of: SO_0000010

position:172989:-1
position: 172989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175340:-1
position: 175340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172989-175340:-1:exon

TRD_RS13830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: nosD
locus tag: TRD_RS13830
old locus tag: trd_A0192
inference: COORDINATES: protein motif:HMM:TIGR04247.1
GO process: GO:0071941 - nitrogen cycle metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrous oxide reductase family maturation protein NosD
translation: MRRFVLAAALALLLTPLAPVQATSPGEILVCPDCPQRDLAAAIAAAPAGAVIRVRGGYYPGPLVIDRPVTLLGEDWPIIDGGGRSTVVHVAAPEVHLEGFVVRGSGTSHDREDSGILVTAAQARIIGNRVLDSLFGIQLLDAPDGLVQENLVVGKPLPEPQRGDGIKLWYSPRARVVGNHVQDSRDVLVWYSDGTLVEGNLVERGRYGIHFMYSNDSTIERNVLRDNSVGLYLMYGARMTVRGNVFLHNRGPSGHGLALKETDGALVEGNLMLRNRVGLYIDNSPISENVVNRISGNWIAYNDIGLLVSPATRRNVIAGNTMLENIEQAVPQGGGTLQHLSWEENGRGNFWSDYAGYDADRDGIGDLPYESRALSSALTDRAPLLAFFRFSIAAMALDLAARAVPLFQPPPRLADPSPLVAATPWPAVPWDAPAPAPYRAFLSLGVLGLALLPLLVAFRRPRPALALAGAPAASTSTISCLAPEQADLEQEIAAVAPVIQVNQLRKRYGERMVLDGVSFAVQPGEAVALWGPNGAGKTTILRCLLGRTNYEGTVSVFGRSPLRDGPAVRARIGYVPQQLPLLDLPVGELVTTIAQLRGEPLERAWERLRTFGLEQAWHQPMRTLSGGMQQRLALVLATIADPPLLLLDEPTANLDATAREDLLAVLERLRDEGRTIVFASHRPDDVWRLATRVLRLQDGHLVAESRSVFQPKQDVQQLLVLQLEEEALQPATHLLSAHGFLAYRVGHEVRVLVTRDRKAEPFFLLARVGIRVRDFRLEASDGW
SIO_010081: TRD_RS13830
subclass of: SO_0000673
so part of: TRD_RS13830
location: complement(172989..175340)
location: region:172989-175340:-1
so has part: feature:172989-175340:-1:exon

WP_012643063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172989-175340:-1:exon

TRD_RS14890
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14890
old locus tag: trd_A0193
so part of: sequence
location: complement(175345..175980)
location: region:175345-175980:-1
so has part: feature:175345-175980:-1:exon
subclass of: SO_0000010

position:175345:-1
position: 175345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175980:-1
position: 175980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175345-175980:-1:exon

TRD_RS14890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14890
old locus tag: trd_A0193
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGITVRAPAQAGISQAIARVVARIGDRIPFFLAAAALALSLSLPYWHMTLLAPQYPGGLRVWISLTKLTGDVQEVNGLNHYIGMMKLEDAAPFERAIAPYGVLALALVALLAGLLRRRWTALLAILVVIFPLVFVADLQYWLWYFGHHLDPHAALSSAIRPFTPPVFGTGRVGQFVVETRFDSGLYLAVLAAASALVGIIARLRGPAQRG
SIO_010081: TRD_RS14890
subclass of: SO_0000673
so part of: TRD_RS14890
location: complement(175345..175980)
location: region:175345-175980:-1
so has part: feature:175345-175980:-1:exon

WP_012642722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175345-175980:-1:exon

TRD_RS10110
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: nosZ
locus tag: TRD_RS10110
old locus tag: trd_A0194
so part of: sequence
location: complement(176069..178096)
location: region:176069-178096:-1
so has part: feature:176069-178096:-1:exon
subclass of: SO_0000010

position:176069:-1
position: 176069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178096:-1
position: 178096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176069-178096:-1:exon

TRD_RS10110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: nosZ
locus tag: TRD_RS10110
old locus tag: trd_A0194
EC number: 1.7.2.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020266473.1
GO function: GO:0050304 - nitrous-oxide reductase activity [Evidence IEA]
GO process: GO:0019333 - denitrification pathway [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Sec-dependent nitrous-oxide reductase
translation: MAERQDRPPSSIGQRKVSRRGLLGTAAGLSAGALLASCSVFQRKEETPKLGASADEIIKARQLTPEDVTAALMTYVPSGKYDEYLMFSSTGHGGQVLVHGLPSMRLLKVIAVFTPEPWQGYGYGGYTNEVLEGGYFHGKPILWGDTHHPALSETNGEYDGEFLFINDKANGRVAVIDLRDFETKQIVKNPLLVNEHGGCFVTPNTEYVLEADQYSVPLGGVYAPITEYKEKYRGVLTFWKFDRQKGRIVPEQSFAIETPPYWHDLADAGKGPSHGWAFWNSINTELAIPGIAEGRPALEIATTQRDMDYLHVVNWKKAEEVIAAGKYEEINGFKVIRMDVAAKEGVLFLIPEPKSPHGVDVTPGGDYIVVAGKLDPHVTVYSFAKIQQAIQAGQWDTDEYGIPVLPFEQCVEAQVELGLGPLHTQFDDQGYAYTSLFLDSAVAKWALGKPYRDDGWKLVEKLPVQYNIGHLAAVEGDTTKPAGRFLVVHNKWSVDRYASLGPLLPQNAQLVSIAPNQPMRVLYDCPIGIGEPHYAQIIKRERIKSWEIYPEVGWNPHTQSTDPNAVLKVGEERIERRGKTVEIWGVLLRSQIRPDLIEVEQGDEVIWHLTNIERAKDATHGFALGGYNINLSLEPGETQTIRFKADIPGTFPFYCTEFCSALHLEMMGYFLVKPT
SIO_010081: TRD_RS10110
subclass of: SO_0000673
so part of: TRD_RS10110
location: complement(176069..178096)
location: region:176069-178096:-1
so has part: feature:176069-178096:-1:exon

WP_143714764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176069-178096:-1:exon

TRD_RS10115
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10115
old locus tag: trd_A0197
so part of: sequence
location: 179555..180310
location: region:179555-180310:1
so has part: feature:179555-180310:1:exon
subclass of: SO_0000010

position:179555:1
position: 179555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180310:1
position: 180310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179555-180310:1:exon

TRD_RS10115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10115
old locus tag: trd_A0197
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013494969.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-DNA glycosylase
translation: MDRTVDRLSALAQRIVACAACPRLVAYRAAVAQAKRRAYRDEDYWGKPVPGFGDPQARVIVVGLAPAAHGGNRTGRMFTGDASGDFLYRALYRVGLANQPVSRQRGDGLALREAYITAACRCAPPDNRPTREELARCRPYLVEELGLLEQAQVLVCLGQIAFEAALAALRELGAGQPEPVGEVATPRPRFRHGALYRWPALPWRNSTLWLIASYHPSRRNTQTGLLDEAMLDAIFRTARQLADETQSNATG
SIO_010081: TRD_RS10115
subclass of: SO_0000673
so part of: TRD_RS10115
location: 179555..180310
location: region:179555-180310:1
so has part: feature:179555-180310:1:exon

WP_012642531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179555-180310:1:exon

TRD_RS14665
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14665
so part of: sequence
location: complement(180289..181602)
location: region:180289-181602:-1
so has part: feature:180289-181602:-1:exon
subclass of: SO_0000010

position:180289:-1
position: 180289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181602:-1
position: 181602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180289-181602:-1:exon

TRD_RS14665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14665
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAFTVEEFRKFLDLIEQHPELREELRRYVLTQELLTLPTEVRDLSRRVDRLEQAVESLTEAVRELVTVVRSHDERLSRVEQQVADLRELIRELAELTRRHDTELQEIRALLARQDERIARLEEIAARQEERLARLEEIAARQEERMARQEERSARLEEIAARQEERLARLEEIAARQEERMARQEERSARLEEIAARQEERLARLEEIAARQEERMARQEERSARLEEIAARQEERLARLEEIAARQEERMARQEERLDRHEERLDRIEVEMREMRAAITTLTEAVTALTRKTEEHDHRLDRLSRLYGAEVELRALRRILDLYRAAGWEPVTRPRAVAVNGEFDVVVLMRHPERGEYWFIVEAKARLHPRDVVEFAGKLQQQQVRRALREQGVSGLTMAYLYGYSVDRRVDQAARTLGIGILDELGEAVAPQPVALD
SIO_010081: TRD_RS14665
subclass of: SO_0000673
so part of: TRD_RS14665
location: complement(180289..181602)
location: region:180289-181602:-1
so has part: feature:180289-181602:-1:exon

WP_041437238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180289-181602:-1:exon

TRD_RS10125
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10125
old locus tag: trd_A0200
so part of: sequence
location: complement(181915..183282)
location: region:181915-183282:-1
so has part: feature:181915-183282:-1:exon
subclass of: SO_0000010

position:181915:-1
position: 181915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183282:-1
position: 183282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181915-183282:-1:exon

TRD_RS10125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10125
old locus tag: trd_A0200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012257295.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO process: GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrpB-like pyridoxal phosphate-dependent enzyme
translation: MSAAETVKFVLTEADLPTHWYNLAADLPTLPPPPIHPGTGEPVGPADLEPVFPMELILQEVSRERWIAIPGPVLDVYRLWRPTPLFRARRLERVLGTPARIYYKYEGVSPAGSHKPNTAVAQAYYNKQAGVKRLTTETGAGQWGSSLAMACAFFGMELKVYMVRASYLQKPYRRILMETWGAQCVPSPSPDTASGRRFYEQDPEHPGSLGIAISEAVEDAASRADTKYSLGSVLNHVLLHQTVIGLEALRQFELAGDYPDVIFGCVGGGSNFAGLTFPFVRDKLQGKDVRIVAVEPAACPSLTRGVYTYDFGDTARTTPLLKMHTLGHTFIPARIHAGGLRYHGMAPLVSHLYEHGLIEAIALPQTKVFEGAVLFARAEGIIPAPESAHAVRAAIDEARRCAETGEEKAILIGLSGHGHFDLAAYEAYLAGKLEDYEYPEEAVRQALAELPKVSG
SIO_010081: TRD_RS10125
subclass of: SO_0000673
so part of: TRD_RS10125
location: complement(181915..183282)
location: region:181915-183282:-1
so has part: feature:181915-183282:-1:exon

WP_012643107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181915-183282:-1:exon

TRD_RS10130
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10130
old locus tag: trd_A0201
so part of: sequence
location: complement(183439..184425)
location: region:183439-184425:-1
so has part: feature:183439-184425:-1:exon
subclass of: SO_0000010

position:183439:-1
position: 183439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184425:-1
position: 184425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183439-184425:-1:exon

TRD_RS10130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10130
old locus tag: trd_A0201
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873704.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation diffusion facilitator family transporter
translation: MHRHEHQHTPASLRAEYKQRALAWALGITLVFMVAEAIGGWLAGSLALLADAAHMATDAAALGLALFASLLARRPATPARSYGFYRAEVLAALANAAFLILVCAGIFWEAFQRLLHPRPVDAPLMLAIALAGLAANGAAAWVLSRGALHRHDVNLRSAFLHVLGDLLGSVAAIAAGTIIWLTGWTPVDPLLSAAIGLLVLRSAWRVLWDSVEVLLEATPAHLDPGAIRAAMRTVPGVVDVHDLHVWTVTSGFIALSGHVEVDETRPWPAVLLDLAQVLRDRFGILHVTLQPEEPAGLPEAFRGCSLDSPEGLRSCLLPLAEETTTSQR
SIO_010081: TRD_RS10130
subclass of: SO_0000673
so part of: TRD_RS10130
location: complement(183439..184425)
location: region:183439-184425:-1
so has part: feature:183439-184425:-1:exon

WP_012642406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183439-184425:-1:exon

TRD_RS10135
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10135
old locus tag: trd_A0202
so part of: sequence
location: complement(184412..186673)
location: region:184412-186673:-1
so has part: feature:184412-186673:-1:exon
subclass of: SO_0000010

position:184412:-1
position: 184412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186673:-1
position: 186673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184412-186673:-1:exon

TRD_RS10135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10135
old locus tag: trd_A0202
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873388.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LUD domain-containing protein
translation: MPARSKAFQRALDTALANRAQREALERTLTRYRQRRAEAFADVDFSALRTDLRRRKEAAIAQLPELVAAFQRQAEAVGASVYLARTAEDARRYIAELVQRTGARLVVKSKSMATEEIRLNEALEHAGARVVETDLGEWIVQLAGERPSHLIGPAIHKSREQIAELFSRVLGRPIAPDPPQLVEVARQELRRAFIEADIGITGANAAIAETGTLVIVTNEGNAELVATLPPIHVAVVGIDKIVPTLDDIPPLLRVLPRAGAAQKLTVRVLFVTGPTRTADIEIQLVRGAHGPRELHIVLLDNGRLAARQDPELVDALYCIRCGACSNVCPPYQVVSGHLFGHIYTGPIGLPLTAIHHGLEAVADPQSLCVSCNACETVCPVAIPIPRLILDVRARVAERLGLPFLKRAVLERWSDPRSGDRWARLAALAAAPLADRDGFLRALPLVDGATSSRHLPAPARRPLRDRLRHLAPELVGERAAPPPRFAGSRVVGQTVAFFPGCLIDRLLPEMGEAAVQVLEACGCRVVFPLEQHCCGLVANNAGDRRHARTMARQTIALLERVEADWIVTPSTSCFAAIAQDYQHLFRDEPAWRERAARAAARVVDFVTFLDRIAQLGPQEWSRPGPVVTYHDSCQSANALGLREQPRRLLSEVLGCTVVEMEESSFCCGFGGTFSLDYPELSAAILERKLRTAGATGAPLVVADNPGCLMQIRGGLHARGNPQRAVHLAELAAERLADLAGPPVEQGERTIHAPA
SIO_010081: TRD_RS10135
subclass of: SO_0000673
so part of: TRD_RS10135
location: complement(184412..186673)
location: region:184412-186673:-1
so has part: feature:184412-186673:-1:exon

WP_012643306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184412-186673:-1:exon

TRD_RS13835
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13835
old locus tag: trd_A0205
so part of: sequence
location: 187819..189423
location: region:187819-189423:1
so has part: feature:187819-189423:1:exon
subclass of: SO_0000010

position:187819:1
position: 187819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189423:1
position: 189423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187819-189423:1:exon

TRD_RS13835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13835
old locus tag: trd_A0205
inference: COORDINATES: protein motif:HMM:NF019520.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PucR family transcriptional regulator
translation: MRVADLLDLPVLQGARVVAGASGLEARVRWVHVVDLPDPLPWIDRGMLMLSTGIAWPRQDEELADLVRRLAERGVAALGLAVPHYFARFPDPMRIAAEEVGLPLIEIPWEIPFVRITETVHQLILREQWQELERAEKLHRELMRAAARTRSLDRLVRTLGELLGRSITVEEPDGTLLAYYQRGPYEDAARQVTIESGRAPAWLQEGLAARGYLPPQGTQPYRVPAIPELGLRERVVCPIWLHGELVGLVWIIEGGEPLSGLDLRAAEHAALVFALLFAQQRELAQLEARLGYAFLNTVIEGRFSGSPEELERARALGYDPARRYRVAVIALGEPPLTVEAFQRREQVALRVRRVLRQLAAAPLVATVHDQVIALVEQEAHLERIWQELAGCGLTAVAGRAHAGPDGVRRSYREACTLLEYVSRPGLYRYEDLVLERVLAGDSEARQAFLSLWLGPLERARHGDRLVETLVHWVRARFSVNAVAEELGVHPNTVRYRLEQAGTLLGRDLSDPEAQFELQLLLRLLGREGKLPVVA
SIO_010081: TRD_RS13835
subclass of: SO_0000673
so part of: TRD_RS13835
location: 187819..189423
location: region:187819-189423:1
so has part: feature:187819-189423:1:exon

WP_012642991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187819-189423:1:exon

TRD_RS10150
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10150
old locus tag: trd_A0207
so part of: sequence
location: complement(190089..190781)
location: region:190089-190781:-1
so has part: feature:190089-190781:-1:exon
subclass of: SO_0000010

position:190089:-1
position: 190089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190781:-1
position: 190781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190089-190781:-1:exon

TRD_RS10150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10150
old locus tag: trd_A0207
inference: COORDINATES: protein motif:HMM:NF018894.2
GO function: GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PilZ domain-containing protein
translation: MIQRPLTQPPKGFTVWQTADLGVPDRTGRLAWHRTRVEDFTPDGQRVVVGWPMVQLAYVFVHRGDPVYLGATVPDDALYVVPCEVVATVLEPQARLVLAPVGNWERMQRREHCRVAVTIAPEEILLLPAEGEPQPLRGLIVDLSAGGVRLRLSQPLRPGDRLALRFALPNATQPIGAVAVVRRVTPLEHADPPRWDHGCQFERLDRRTEDVIVRFVFQRQRECARQTRAG
SIO_010081: TRD_RS10150
subclass of: SO_0000673
so part of: TRD_RS10150
location: complement(190089..190781)
location: region:190089-190781:-1
so has part: feature:190089-190781:-1:exon

WP_012643282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190089-190781:-1:exon

TRD_RS15250
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS15250
old locus tag: trd_A0208
so part of: sequence
location: 191803..193011
location: region:191803-193011:1
so has part: feature:191803-193011:1:exon
subclass of: SO_0000010

position:191803:1
position: 191803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193011:1
position: 193011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191803-193011:1:exon

TRD_RS15250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS15250
old locus tag: trd_A0208
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004892642.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellin
translation: MRIYNNVNAVNAQRNLSITGFALAKSIEKLSSGLRINRAADDAAGLSISEKLRAQIRGVMQAMRNAQDGVSMIQTAEGALNEVHSMLQRMRELAVQAANDTLTTEDRRAIYQELDNLRVEVDAIVARTSFNGKNLLDGTLVTTVAAGSEIKVGTTLTGGGETAHVFALDVSGAVPGRTYTFSYNSTTDTLTLTRSGDNVSQSITISNIAAGGSQVLNFSALGIKLTVTSTGGITADNLGAALTAGATDTITTHNGGGSANMQVGPNSTHSFNVNFSDVRVSGTASAMTTLDSAITAFSTSLSGLNSAQVTAAQNLINALDGAISYVNEVRSYLGAVQNRLEHAIANLGVQHENLTASESRIRDVDMAKEMVIFTRNQILQQAGVAVLSQANAMPQSVLQLLR
SIO_010081: TRD_RS15250
subclass of: SO_0000673
so part of: TRD_RS15250
location: 191803..193011
location: region:191803-193011:1
so has part: feature:191803-193011:1:exon

WP_012642772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191803-193011:1:exon

TRD_RS10160
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10160
old locus tag: trd_A0209
so part of: sequence
location: 193192..193731
location: region:193192-193731:1
so has part: feature:193192-193731:1:exon
subclass of: SO_0000010

position:193192:1
position: 193192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193731:1
position: 193731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193192-193731:1:exon

TRD_RS10160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10160
old locus tag: trd_A0209
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVERCCGARAAGASWQLEAQAARVRLRAGAAGEPPAPVVAHVALTVERSVEGAPLRLRGAVAVHGVTTWFTVDLASGTVALCDARGGSWSGRLEAAPEPVRQLVATVREQAPGEPTRRWTELRVGGVRLGRAASASEREETRELTVRVEDPRLLERIRGTRVALEWQALALRVLAGRAG
SIO_010081: TRD_RS10160
subclass of: SO_0000673
so part of: TRD_RS10160
location: 193192..193731
location: region:193192-193731:1
so has part: feature:193192-193731:1:exon

WP_012642395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193192-193731:1:exon

TRD_RS13840
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13840
old locus tag: trd_A0210
so part of: sequence
location: 194833..196728
location: region:194833-196728:1
so has part: feature:194833-196728:1:exon
subclass of: SO_0000010

position:194833:1
position: 194833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196728:1
position: 196728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194833-196728:1:exon

TRD_RS13840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13840
old locus tag: trd_A0210
inference: COORDINATES: protein motif:HMM:NF013867.2
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheB
translation: MVDQLIRQVGEKIFPCLGFSPTELLWQRLARVVHQEARRVGAASVEEFLQRAVRGERAVLEAICQALTINETYFFREPKHFDALRQLLPELAKQQQPVRMLSAGCSSGEEPYSLAMTAHEVLGPLGNAFEVLGVDFDGEALERARGGCYRQWSFRDQGLERARPHLEQRGELWCVRDVIRGRVRFEQVNLIERVPPGPFAVIFCRNTLMYFTSEHRESIVRRFVEALLPGGILVIGSAETLDRIPAELERVTVAGAYLYRKREHVVPVAGTEPAETVRVLLVSSSPVSRVGIRQALRQLPGVELAGEVRSVEEARARLEDDGSAVVLLDALEDSAVLERAALLQGWPLVAIVGPGVAVPRGLPSLVVSDLVPGAVRRLAPELGETLRQARVRPLGRLRGEGNGTGLLLRRSVASGTLAGANGRTGTGALGEPLRRVAERLLLIGSSTGGPAVVADLIARLPAGLGLGVLVVQHMPPNFTRSFAERLSRVGRYAAREAEDGELVVADTVLVAPGGRNVLLTRGGRVQVVPPDRSDIYVPNVNRAFASAARAGLAPRTMAVILTGMGDDGAIGMAELAAAGAYTVVQRPEEAVVAGMIEAALARGAVQKVLATADIPSEVVRWAQRGVMATRG
SIO_010081: TRD_RS13840
subclass of: SO_0000673
so part of: TRD_RS13840
location: 194833..196728
location: region:194833-196728:1
so has part: feature:194833-196728:1:exon

WP_052294127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194833-196728:1:exon

TRD_RS10170
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10170
old locus tag: trd_A0211
so part of: sequence
location: 196765..197145
location: region:196765-197145:1
so has part: feature:196765-197145:1:exon
subclass of: SO_0000010

position:196765:1
position: 196765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197145:1
position: 197145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196765-197145:1:exon

TRD_RS10170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10170
old locus tag: trd_A0211
inference: COORDINATES: protein motif:HMM:NF012301.2
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MLKVLIADDSKMMRVMHVRSLRQVGYEVEASEANNGEEALALFEPGKFDLVIVDWNMPGMDGIEFVRAAREKEQGAGKRTPILMITSQSTEEQMLKAKEAGVDNLLTKPVTPEAIGAALEMLLARA
SIO_010081: TRD_RS10170
subclass of: SO_0000673
so part of: TRD_RS10170
location: 196765..197145
location: region:196765-197145:1
so has part: feature:196765-197145:1:exon

WP_012643061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196765-197145:1:exon

TRD_RS10175
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10175
old locus tag: trd_A0212
so part of: sequence
location: 197174..197686
location: region:197174-197686:1
so has part: feature:197174-197686:1:exon
subclass of: SO_0000010

position:197174:1
position: 197174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197686:1
position: 197686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197174-197686:1:exon

TRD_RS10175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10175
old locus tag: trd_A0212
inference: COORDINATES: protein motif:HMM:NF025070.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheX
translation: MSHAIVQDLTTSGRLVEFIGQAAREALEPLCGVEVSVLGEAELPWAHPPVGIALVTVVDTSGGGFQAVVWLGGELEALASVAEVLLGERPDGEDEMLQDAVRELTNILAGQIQRHLASVGLQMGLGLPVYVSGAKSLNVGASLASGAAVRVQVGLPDAPTLDVGFAAKEG
SIO_010081: TRD_RS10175
subclass of: SO_0000673
so part of: TRD_RS10175
location: 197174..197686
location: region:197174-197686:1
so has part: feature:197174-197686:1:exon

WP_012643156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197174-197686:1:exon

TRD_RS10180
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10180
old locus tag: trd_A0213
so part of: sequence
location: 197706..198455
location: region:197706-198455:1
so has part: feature:197706-198455:1:exon
subclass of: SO_0000010

position:197706:1
position: 197706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198455:1
position: 198455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197706-198455:1:exon

TRD_RS10180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10180
old locus tag: trd_A0213
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVKVAPVFPASAPLTRNPKVPQKYRPVLWEQYLLPTLAENLATLLGISVGFLPESIVGAVFERGKFKPGTGWALARFRINLQEEQVPAFLLQPLAEALDWGAIGMRRPPATREAPVVGKEGVQLSEAQEMDLAAYHEVCNVVTCGVLARAWRSKLERPLYILLDGVEAVVPAQFPAELENGKWVILQASFGYSERPVKPVKGQPPQYEKQTVWLFVVSEALALKALWGAPDGKEKDKTAWLVSTGQWT
SIO_010081: TRD_RS10180
subclass of: SO_0000673
so part of: TRD_RS10180
location: 197706..198455
location: region:197706-198455:1
so has part: feature:197706-198455:1:exon

WP_012643281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197706-198455:1:exon

TRD_RS10185
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10185
old locus tag: trd_A0214
so part of: sequence
location: 199628..201718
location: region:199628-201718:1
so has part: feature:199628-201718:1:exon
subclass of: SO_0000010

position:199628:1
position: 199628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201718:1
position: 201718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199628-201718:1:exon

TRD_RS10185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10185
old locus tag: trd_A0214
inference: COORDINATES: protein motif:HMM:NF012245.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MTIGFREKVLGILAAMAAIFVLLGAIGWFWLGQTRSAVQQVNGMNEALTVLGQTARRMAEVRANVVAHVGATTNADYRRQLDERIAELDNQIAQGLDQLQALAHTPEELERMAAVREAWTTYRASAERTLQLSRKYDLVAAQQNMTGDAAQKFAALQDAIRNLEQASSQDAQAIAQRAESQLTMLRFAMLGAAGLAVVAFLGGLLVLRPALRTVAEIAGASQQLAEQELAALEAALGKLAAGDLTARFAVTMEPLPVRGRDELARMAQSFNRMLERLRAVGSAFGNALENLTQLVGQVRLAVRQVGEAGAQAQALSAQIAEASNAVARTIQDVAQGSATQAEQVSSASSAVEEMSQTIQAVAKAAQEQGRALQRATELVQQMADRNQRAGELARGVTERAGRNREQAESGSAVVQRTLSTMDRVRAQVEETARAIQELGERSKQIGQIVQVITDLTEQTNLLALNAAIEAARAGEAGKGFAVVAEEVRKLAERSAASTQEIAQMVQGIQRTVEQAVAAMAESAGSVTQVSSEAREVAEVFAAIRQAAEEVAERNRELLASLEEIAKRSSELRATMEDTAAIAEENAASASELSSTAEQVRGSIRRVTGVAEQNAAAAEEVSAATEQMATQVGEIAAAAGQLVGLADQLARLVERFRVAAGEPARAPVEANGRGWSEPAASRVPVSAGANGNGRGAW
SIO_010081: TRD_RS10185
subclass of: SO_0000673
so part of: TRD_RS10185
location: 199628..201718
location: region:199628-201718:1
so has part: feature:199628-201718:1:exon

WP_012642447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199628-201718:1:exon

TRD_RS10190
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10190
old locus tag: trd_A0215
so part of: sequence
location: 201750..204797
location: region:201750-204797:1
so has part: feature:201750-204797:1:exon
subclass of: SO_0000010

position:201750:1
position: 201750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204797:1
position: 204797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201750-204797:1:exon

TRD_RS10190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10190
old locus tag: trd_A0215
inference: COORDINATES: protein motif:HMM:NF014567.2
GO process: GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chemotaxis protein CheW
translation: MGEDRELIEMFIEETRERLESIEPALVELERAESPAEKERLLNEVFRHLHSTKGSAGYLNLSDLVALVHAAEHLADVLRKGAPVQPEHVDLLLQTVSLVRGYLAFLAGQAELPEGLPVLTQRLQQAAERALERPHAGVDAAAGDATPATSGPTSEGETRPDEQRASETELTSSTVRVPVHVLDRLGRLAEEMLVTRNRITALAANLQDGELVGASKKLSVMVSELQDIAALTRLQPISSLFSQMPRVVRDAARATGKEVDLVIDGGRLEVDRRILQELRDPLVHLLRNAVDHGIESPERRIAFGKPSRGRIALRAMREGSNLVIEVSDDGKGIDYEAVRQKAVERGFVSAREAATLTEAELNALLLRPGFSTRDRATELSGRGVGLDVVAVRMQELGGSLSISSVPGQGTTIRLVVPTSVSVMNTLVFTARGYLLGIPYNVVQEIVLITDRDIEHYGEQDVFRLRDQLVPLFTLTSWPERGDGAKKQAGKHYVLVLRGEGTLAGLLCDGIARFEELIVKPVGNLLRGVESVSGLATLGTGEIVLILEPEKILADAGLAMARIQAEQVQLGLVHEHQASEDDLGERLVLLKGYGEHRYAVPVRLVSRIVRFTPEELAIFGERIYYRTEQALIPLIDLDRALRMGEGGAEQGGIAVLLRADNLECGFVASQVVRIGRVGVEPEPSDRHGVTGLLNLSDGVYLMVDVPTLVHGELRRLYEARQEARSVRGKKALIVEDSVFYRDALEAVLKRAGYAVSAVGSVEDALVFLARVPDVALIITDYNLPGKSGLDLIQVVRSGETAVRADVPIVVLSQYLGDQPNSAELAERLRAAGANAVYSKFDELEQSQLLEQFRHLVVHDEAETTADQQHAREEETVHVLAVNLGAEVYGVPIDRVREITTLDGVTPTPLDDAGFLGLANIRGEIVPVFDLGGVLRRPVRTNGEAVDVVTLTSLGPMVLRGESIRGTVRVPVSELREPTGNLGPLAEIVPSVATLPDCLLQVVELEKLAGVCLGRRG
SIO_010081: TRD_RS10190
subclass of: SO_0000673
so part of: TRD_RS10190
location: 201750..204797
location: region:201750-204797:1
so has part: feature:201750-204797:1:exon

WP_169302308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201750-204797:1:exon

TRD_RS10200
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10200
old locus tag: trd_A0217
so part of: sequence
location: 205377..207350
location: region:205377-207350:1
so has part: feature:205377-207350:1:exon
subclass of: SO_0000010

position:205377:1
position: 205377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207350:1
position: 207350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205377-207350:1:exon

TRD_RS10200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10200
old locus tag: trd_A0217
inference: COORDINATES: protein motif:HMM:NF012245.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing methyl-accepting chemotaxis protein
translation: MRLGFRQKLLALLLTSAFVFLGLGSVGALWLASLRAQVIALETEGKQANDLLRVLAQARQLEERVRSQQGPTEEWSAQARRVASDLTALQRAGETTDERAAVGQVVAAWATVERALAASPEDSENVREAFASFWASAAAVASGSEPGGAGRGWSIASQLSALQLMAMACAGLALVILVGWFWSLRPPLRTIGELATTAERLARSEISELERALGQLAAGDLTGTVTVRTEPLPIRGADEFAQMASAFNQMLERIRAVSISYTSTVSDLSETLVRVREAASRVSASGEATEALSSEVARLAEELSQVAERVAAGSVAQAEQIQSSSRAIDESERSARRVVEVAVEQARELRAATQVIEVTENAARRVHELSLEVTGRARENSTRATEGSALVERATELSRSVQEQMVATRRTITALVEHVQAIGQFVEVIQGLARQTTFVALNAAIEAARAGEAGKGFAVVAEEVQKLAASSGEAARRVTEIVERIVATVEEAACALEEGDAVVTVVVHETERVVGFFGDIRTAAVEIAEANARLLAELEALRQQLQSVRQTLERTAQLADENQRQAVQLGAQVHDIRGAMRRIADVAQQNAALAETMASSVGTARNRIEEMAQTATVLQQVARTLRGLLSRFRLRSEGSLVSDGSSSIRSSILDLVR
SIO_010081: TRD_RS10200
subclass of: SO_0000673
so part of: TRD_RS10200
location: 205377..207350
location: region:205377-207350:1
so has part: feature:205377-207350:1:exon

WP_012643112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205377-207350:1:exon

TRD_RS10205
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10205
old locus tag: trd_A0219
so part of: sequence
location: 207664..208026
location: region:207664-208026:1
so has part: feature:207664-208026:1:exon
subclass of: SO_0000010

position:207664:1
position: 207664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208026:1
position: 208026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207664-208026:1:exon

TRD_RS10205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10205
old locus tag: trd_A0219
inference: COORDINATES: protein motif:HMM:NF015602.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar protein FlaG
translation: MNPPILPIPPVGPNEPGAVEEATPLQPVKPVEASSPAAGRAAQGEERRDLLPAHRVDLSLDPQLVRKMPRDVYLRYYVRPGIGNWVIQLIDRETQEVIREIPPGGLKEVLQELAEQQRTE
SIO_010081: TRD_RS10205
subclass of: SO_0000673
so part of: TRD_RS10205
location: 207664..208026
location: region:207664-208026:1
so has part: feature:207664-208026:1:exon

WP_012642412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207664-208026:1:exon

TRD_RS10210
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: fliD
locus tag: TRD_RS10210
old locus tag: trd_A0220
so part of: sequence
location: 208072..210048
location: region:208072-210048:1
so has part: feature:208072-210048:1:exon
subclass of: SO_0000010

position:208072:1
position: 208072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210048:1
position: 210048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208072-210048:1:exon

TRD_RS10210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: fliD
locus tag: TRD_RS10210
old locus tag: trd_A0220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871041.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0007155 - cell adhesion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar filament capping protein FliD
translation: MSITFDGLASGLNTKDIISKLLQLEQQPITRLNQRKQDIQKQRDAWKDLGTRLQNLASALGTLTQRGTIVGFAVRPSDGNAPFTASARPGAVAGTYSIQIQQLATATTLRSGSALGADIDPTAPLADVNFRSSITAGTFTINGVAITVDPTSDTLNDVIARINASGAGVTASLVTVDGRTRLALTADTPGGPLQVGMIGDSSNFLSVTSLAGAPRSGDTVVGTRSLTAVKTTVPLSQAMLATPVSGSGTLTINGVAIAYDTATDSLSTILNRINASNAGVTASYDSTSDRIVLTAKTTGSLAITVSDTGNLATALGLASGQLQLGQNAVYSLDGGTTWQYSTSNTISDAIPGVTVTLTRTTTSPYTFTVEPDSESAIAAVRKFVDQFNSVLSFIADKTAYDATTKTAGTLMGDSAVRTVESTLRRLVTSPAINAGGRYRTLADIGISFGAVGSVVGTTNQLQVDENKLRAALRENPDAVFELLGATSRATLTTPGDIARVSGTPRPPASGRYVIGSDGAGNLTASFYDTANQLLWSATGTIAAGGTNATLIPGLVLSAASTLTGATSEITVTQQEGVLTQLGRYLNGILGRDGLVRARGDAFEQQLRGIDQQIDRYQQRLDDRKAQLVRQFATLERMLAEIQAQGTQLQGQIIKMLSS
SIO_010081: TRD_RS10210
subclass of: SO_0000673
so part of: TRD_RS10210
location: 208072..210048
location: region:208072-210048:1
so has part: feature:208072-210048:1:exon

WP_012642496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208072-210048:1:exon

TRD_RS10215
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: fliS
locus tag: TRD_RS10215
old locus tag: trd_A0221
so part of: sequence
location: 210073..210480
location: region:210073-210480:1
so has part: feature:210073-210480:1:exon
subclass of: SO_0000010

position:210073:1
position: 210073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210480:1
position: 210480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210073-210480:1:exon

TRD_RS10215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: fliS
locus tag: TRD_RS10215
old locus tag: trd_A0221
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871040.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar export chaperone FliS
translation: MPANPYQRYRQVTVETASVAELMVLLYRRAIQVLDEAEEAIHSRDVPRAHARLVFAQEIVAELMASLNLEAGELAQQLLAIYDYLQRRLVEANVRKDPAIVAEVRAFLSSLLEAWEEVAARERVTRPAVPLAASA
SIO_010081: TRD_RS10215
subclass of: SO_0000673
so part of: TRD_RS10215
location: 210073..210480
location: region:210073-210480:1
so has part: feature:210073-210480:1:exon

WP_012642623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210073-210480:1:exon

TRD_RS10220
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10220
old locus tag: trd_A0222
so part of: sequence
location: 210494..210859
location: region:210494-210859:1
so has part: feature:210494-210859:1:exon
subclass of: SO_0000010

position:210494:1
position: 210494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210859:1
position: 210859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210494-210859:1:exon

TRD_RS10220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10220
old locus tag: trd_A0222
inference: COORDINATES: protein motif:HMM:NF017237.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar protein FliT
translation: MDEASVLELAARLRDLTVAQLEAARAGEWDEALALLEERGTLVQQLQAVDPARLSAASREAIARLLEEMQVLDRELVGRVETALQATREAQQAVERNDAAARGYRRALGTAGEGELVDREA
SIO_010081: TRD_RS10220
subclass of: SO_0000673
so part of: TRD_RS10220
location: 210494..210859
location: region:210494-210859:1
so has part: feature:210494-210859:1:exon

WP_012642826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210494-210859:1:exon

TRD_RS13845
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13845
old locus tag: trd_A0223
so part of: sequence
location: 210863..211531
location: region:210863-211531:1
so has part: feature:210863-211531:1:exon
subclass of: SO_0000010

position:210863:1
position: 210863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211531:1
position: 211531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210863-211531:1:exon

TRD_RS13845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13845
old locus tag: trd_A0223
inference: COORDINATES: protein motif:HMM:NF016119.2
GO function: GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]
GO process: GO:0045184 - establishment of protein localization [Evidence IEA]; GO:0016485 - protein processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sortase
translation: MRVRSGSVSIAIAVLGLLLGVSCVRVEIQRTRTPELAQSTPTVVLRDAKVAKPTPVARAERRGQASEGVWRTLFRYRMPPATALEIARLGITVTVVEVASVVDERGWYWPVPTDAAAHLVGTANPGEPGNIAITGHVDTERGPGVFWRLLDIRPGDEITVWSAAGTFVYRVVDVQTVAQSERAVLRQTDRETLTLLTCIPDGRYERRLVVRAEPVRPAVATR
SIO_010081: TRD_RS13845
subclass of: SO_0000673
so part of: TRD_RS13845
location: 210863..211531
location: region:210863-211531:1
so has part: feature:210863-211531:1:exon

WP_012642972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210863-211531:1:exon

TRD_RS10230
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10230
old locus tag: trd_A0224
so part of: sequence
location: complement(212911..213705)
location: region:212911-213705:-1
so has part: feature:212911-213705:-1:exon
subclass of: SO_0000010

position:212911:-1
position: 212911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213705:-1
position: 213705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212911-213705:-1:exon

TRD_RS10230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10230
old locus tag: trd_A0224
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012642405.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERRRSPVQLIGFGCLGLLLLVLAVGGGGLIGYLAFQYGLLSTATPTPQRGQGQIITPPADSSASTPTMQAAPRETPTAAPVAPRAVTPTPQPEPTPGPVVIPDWPTYEDPGYIRFQHPPHWLVITTPEAPEYNLRSCHCYWIVMSELMVQNSPSPEVVADWFNTKSLDGIPPGGIWMEILRLDSEYAPRPDFLDGTPQGSLVIGNQYEAEVYQLDPNGRIRAYHYRDGQGRPWVIVVRAPDGFDRANPQVQRLTGVLATIDHR
SIO_010081: TRD_RS10230
subclass of: SO_0000673
so part of: TRD_RS10230
location: complement(212911..213705)
location: region:212911-213705:-1
so has part: feature:212911-213705:-1:exon

WP_012643067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212911-213705:-1:exon

TRD_RS10235
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10235
old locus tag: trd_A0225
so part of: sequence
location: complement(213722..214555)
location: region:213722-214555:-1
so has part: feature:213722-214555:-1:exon
subclass of: SO_0000010

position:213722:-1
position: 213722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214555:-1
position: 214555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213722-214555:-1:exon

TRD_RS10235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10235
old locus tag: trd_A0225
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDEEPRLTEPAPPDRPLVYSGEPAGDSGGFPWRWVLIGCGGALVLACVCLVAAVGTYAFLTVTRATPTPQIAMSTPAARPARTATVGSGSLTPATAVQPAPRGTPSSSTGQSSAGLPAGWRWFDDPSGQVRLAVPGGWNFFYEEKICCNVTLVTFDPGQLPSGRIAWAPPGSGAAHEVPAGEMVVDLFIVAPPYADQPPDFGRPPDGEDIVGGRYHAQLYFSAPYTDWPSGQVITYLYQDDRGRQWCLIAYFGTPFEQDMEHLAMLGQIVASIQHPS
SIO_010081: TRD_RS10235
subclass of: SO_0000673
so part of: TRD_RS10235
location: complement(213722..214555)
location: region:213722-214555:-1
so has part: feature:213722-214555:-1:exon

WP_012643086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213722-214555:-1:exon

TRD_RS10240
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10240
old locus tag: trd_A0228
so part of: sequence
location: 216088..217638
location: region:216088-217638:1
so has part: feature:216088-217638:1:exon
subclass of: SO_0000010

position:216088:1
position: 216088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217638:1
position: 217638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216088-217638:1:exon

TRD_RS10240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10240
old locus tag: trd_A0228
inference: COORDINATES: protein motif:HMM:NF019352.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multicopper oxidase family protein
translation: MMRFAPLLLARRWTRRGLFPVMTGSVLLAVACSRRPVAPTPSPQTAAEPTVTVLPTRSSGSAAGPIREYTIEAVEAEIELAGRRVRTFTYGGQVPGPELRVREGETLRVLLENRLPEPTTIHWHGIPVPNAMDGVPEVTQPAVPPGERYLYEFPVPVAGTYFYHTHVGVQLDRGLVGALIVEPGHEELAYDREVVLVLDDWLDGIAGTPEEVLRQLVGAGHGGHGMGHGAMPGGSMPGMGTMPGMTGTSGEPPEVEPDLVYPLYVVNGRPLEHPFEFVGKRGDLLRLRLVNAASAIIFRVALAGHRFTVVQADGQPIEPLEGDALRIGMGERYDLLVRLDNPGIWPLVAWAEGTDRAAQAVLRYEGASGQVPARVTRPRELSGELVHGLRCRARSAGTEFVPDVERPIVLGGGMGQYVWTIDGQAYPAAEPIRVRRGQRVRFRLQNMTTMPHPMHLHGHFFRVGESATAPVRDTVLVDPMREVVMDWIAENPGRWAFHCHHLYHQETGMMRIVEVT
SIO_010081: TRD_RS10240
subclass of: SO_0000673
so part of: TRD_RS10240
location: 216088..217638
location: region:216088-217638:1
so has part: feature:216088-217638:1:exon

WP_012642424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216088-217638:1:exon

TRD_RS10245
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10245
old locus tag: trd_A0229
so part of: sequence
location: complement(217732..218553)
location: region:217732-218553:-1
so has part: feature:217732-218553:-1:exon
subclass of: SO_0000010

position:217732:-1
position: 217732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218553:-1
position: 218553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217732-218553:-1:exon

TRD_RS10245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10245
old locus tag: trd_A0229
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012641707.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MMMFGQLCDLSGLVALVTGAGGGERGGLGAAIARVLAQAGAQVAVNDLALEDAEATASMIRALGLVAEALPADVADPEQADQLVARVIERFGKIDILVNKAEYHSRAYRPDEIPTEEWQRSVAVNVHAPFYLSRAAVRDMRRRKFGRIINVSNIAAIRASVLHGTPYVATKEALYGFTRHLATEVAQHGITVNAILPGFVLTPKLAALWPDERIARLAPTIPALRAGTPEEIASLVVYLASPEAGYLTGAAIPIDGAVSIVPGGRMDPDNCFV
SIO_010081: TRD_RS10245
subclass of: SO_0000673
so part of: TRD_RS10245
location: complement(217732..218553)
location: region:217732-218553:-1
so has part: feature:217732-218553:-1:exon

WP_052294128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217732-218553:-1:exon

TRD_RS10250
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10250
old locus tag: trd_A0230
so part of: sequence
location: complement(218608..219423)
location: region:218608-219423:-1
so has part: feature:218608-219423:-1:exon
subclass of: SO_0000010

position:218608:-1
position: 218608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219423:-1
position: 219423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218608-219423:-1:exon

TRD_RS10250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10250
old locus tag: trd_A0230
EC number: 1.-.-.-
inference: COORDINATES: protein motif:HMM:NF024950.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MVEERWLAGMVALVTGAGRGEDGGGGAGIARQLARRGARIAVNDISEEFAMATVEQIRQLGREAIAVVGDVSDPNDADRMVDEVVRHFGRIDILVNNAAISGLIPAVERLPNEIWHHQLAVDLDGPFYMSRAALRYMIPQRFGRIVNISSFAAVRTGFVGGVTYTTAKTGLLGLTRQMAYEVAQYGITVNALMPTGLLNPRVLRLRPDWVQGEGPHRAIHPEEELGWIVAYLCHPNMTAISGAAIPVDRGVSNGIGDFAELKRRSGKDTGD
SIO_010081: TRD_RS10250
subclass of: SO_0000673
so part of: TRD_RS10250
location: complement(218608..219423)
location: region:218608-219423:-1
so has part: feature:218608-219423:-1:exon

WP_012643179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218608-219423:-1:exon

TRD_RS10255
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10255
old locus tag: trd_A0233
so part of: sequence
location: 220779..221891
location: region:220779-221891:1
so has part: feature:220779-221891:1:exon
subclass of: SO_0000010

position:220779:1
position: 220779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221891:1
position: 221891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220779-221891:1:exon

TRD_RS10255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10255
old locus tag: trd_A0233
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873521.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: substrate-binding domain-containing protein
translation: METQLIVRVRERRRSCGLSQQQLAERAGISRQTLVAIEAGRLTPSVAVALRLARALGCAVEELFSFAEPPLLEAQLALSERWTVPIPSRVRLGRVGETFVAWPVRDDTGEAEGMIRERAGERVTVEPLVDPATLERSLVLAGCDPALAMLAAHLKRWHRDLRVVWVPLGSRTALQALARGWVHIAGTHLWDPDTGEFNLSEVRHQLVGRPVAVVTLSRWVEGLGLAPGNPKRIRSVGDLVKPGVSIVNRELGSGSRIVLDRFLAQEAIEPAMLRGYERELAGHRAVAEAVANGLADAGPIVYPVARAHGLDFVPLLEERYDLVVPLSVLDWSPVRDLLELLTSRPVRRELEASGYAVQESGTIVATFGQR
SIO_010081: TRD_RS10255
subclass of: SO_0000673
so part of: TRD_RS10255
location: 220779..221891
location: region:220779-221891:1
so has part: feature:220779-221891:1:exon

WP_041437528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220779-221891:1:exon

TRD_RS10260
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: modA
locus tag: TRD_RS10260
old locus tag: trd_A0234
so part of: sequence
location: 221916..222794
location: region:221916-222794:1
so has part: feature:221916-222794:1:exon
subclass of: SO_0000010

position:221916:1
position: 221916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222794:1
position: 222794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221916-222794:1:exon

TRD_RS10260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: modA
locus tag: TRD_RS10260
old locus tag: trd_A0234
inference: COORDINATES: protein motif:HMM:NF024921.2
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
GO process: GO:0015689 - molybdate ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdate ABC transporter substrate-binding protein
translation: MRFERWSARRALLLVLVLASLVSCEGRSTPAAERASSTMRSTEGESAQLVVFAASSLLGPFEQLGEAFRSRHPSVAVSFNFAGSAQLVAQLEQGALADVAAFADPDNMRRAQAAGLIRGEPVVFARNRLALVVPASNPAGIERLADLARPGVKVVLAHENVPAGRYARTMLTRASQRPDYGPDFAQRVLANVVSQEVNVKQVLAKVALGEADVGIVYVTDIEAAGPSVRALEIPSDLNVIACYPIAVAAASQQPALAEEFIALVRSETGQQLLAQYGFEPVSRNLSEPGSCG
SIO_010081: TRD_RS10260
subclass of: SO_0000673
so part of: TRD_RS10260
location: 221916..222794
location: region:221916-222794:1
so has part: feature:221916-222794:1:exon

WP_012642767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221916-222794:1:exon

TRD_RS10265
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10265
old locus tag: trd_A0235
so part of: sequence
location: 222791..223642
location: region:222791-223642:1
so has part: feature:222791-223642:1:exon
subclass of: SO_0000010

position:222791:1
position: 222791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223642:1
position: 223642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222791-223642:1:exon

TRD_RS10265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10265
old locus tag: trd_A0235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013555881.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO function: GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MTRVVETVRLSGGAVRRGAAGWVNPGRLFLLVPVVVSLGFLIAPLVALLVRALGIGDVVRYARDPFFLDALRLTLLTSLATVGLALLFGTPVAWILARWTFPGRRLIEVAVGLPIVLPPIVAGVALLMLFGRMGLLGRYLDPFGIQIPFTTLAVVIAQLFTATPFYIRTALEGFASVPANLEEAALVDGCSQLQAFRSVTFPLALPALVSGLTLCWAKAVSEFGATLLFAGNFRGRTQTLSLAIWTAMEVDLWEAVAIAAMLLLVSLLIFLLVERLPRARQLS
SIO_010081: TRD_RS10265
subclass of: SO_0000673
so part of: TRD_RS10265
location: 222791..223642
location: region:222791-223642:1
so has part: feature:222791-223642:1:exon

WP_012642422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222791-223642:1:exon

TRD_RS10270
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10270
old locus tag: trd_A0236
so part of: sequence
location: 223546..224463
location: region:223546-224463:1
so has part: feature:223546-224463:1:exon
subclass of: SO_0000010

position:223546:1
position: 223546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224463:1
position: 224463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223546-224463:1:exon

TRD_RS10270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10270
old locus tag: trd_A0236
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008616971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGGGRNSRHAAARQSADLPAGGEATEGAAAVLTRCVVLGIGDVASAVAHRLWTAGSLVVIVSEPWPTVTRRGMAFADAVFDGYAVLEGVVARRVETKGEVEALWEERRAIPILVRRDPLEAVEELAPRVLVDARMRKHAAVQPHLCGRARLTVGLGPGFVAGEQVDVAIETSWEELGRIRWEGANRPLAGEPRAIAGVQRERYVYAPMSGLWRTERQLGESVVAGEPVARLVGANGEEVGIAAPIAGLIRGLTRDGVPVEQGTKVLEIDPRGLGGQWRGIGERPRRIAEGVVEAVQLAETALRSG
SIO_010081: TRD_RS10270
subclass of: SO_0000673
so part of: TRD_RS10270
location: 223546..224463
location: region:223546-224463:1
so has part: feature:223546-224463:1:exon

WP_226980753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223546-224463:1:exon

TRD_RS10275
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10275
so part of: sequence
location: complement(225368..225622)
location: region:225368-225622:-1
so has part: feature:225368-225622:-1:exon
subclass of: SO_0000010

position:225368:-1
position: 225368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225622:-1
position: 225622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225368-225622:-1:exon

TRD_RS10275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRQHLWRAPQRRVARSGSTRALVLTAPAIRRDAHTRIIVLALVPVRFMILLLHRKAAQQHRQSSTAHPILIRNRRLRSIRANA
SIO_010081: TRD_RS10275
subclass of: SO_0000673
so part of: TRD_RS10275
location: complement(225368..225622)
location: region:225368-225622:-1
so has part: feature:225368-225622:-1:exon

WP_041437245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225368-225622:-1:exon

TRD_RS10280
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10280
old locus tag: trd_A0237
so part of: sequence
location: 225753..226343
location: region:225753-226343:1
so has part: feature:225753-226343:1:exon
subclass of: SO_0000010

position:225753:1
position: 225753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226343:1
position: 226343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225753-226343:1:exon

TRD_RS10280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10280
old locus tag: trd_A0237
inference: COORDINATES: protein motif:HMM:NF017496.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Uma2 family endonuclease
translation: MQAIEQRERLLTAEDLEGLPEQPGVRYELDEGKLVEMPGAGGIHAAIVVRLVLLLHQFVTSRRLGFVFGDGLGYILRRNPDTVRIPDVSVVRRERVPAAGIPEGFWPGAPDLAVEIVSPHDRAEEVHERVRDYLGAGVRLVWVLWPKSRTVTVYWPDGTARELGPDEKLTGGDVLPGFEMTVSDLFLVSPEASSGE
SIO_010081: TRD_RS10280
subclass of: SO_0000673
so part of: TRD_RS10280
location: 225753..226343
location: region:225753-226343:1
so has part: feature:225753-226343:1:exon

WP_012642384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225753-226343:1:exon

TRD_RS10285
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10285
old locus tag: trd_A0238
so part of: sequence
location: complement(226432..227358)
location: region:226432-227358:-1
so has part: feature:226432-227358:-1:exon
subclass of: SO_0000010

position:226432:-1
position: 226432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227358:-1
position: 227358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226432-227358:-1:exon

TRD_RS10285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10285
old locus tag: trd_A0238
inference: COORDINATES: protein motif:HMM:NF012791.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MSEIPLAHILVPLDGSSLAEQILPVAAGLVRACGRELILLHVLEPSPPERIHGQPHLATAEAAARYLDRISRELAEQRVFCRIAVIAADNAAVATVIARQARALGADLIALTTHGRGGLRGLLFGRIAQQVLQQAERPTLVLRATERSVSLLPETPQHLLIPLDGSPASEHVLPFAWQLARCLAATVTLARVVPTLEHLSFSESAPAVFLPTATAALLELERQHAEQDLQHLAATAPAGLPVTVVVRQGDVVAELAALATDVDLVVMTTHGRAGLPGWLAGSVAARLLERVTIPLLLVPIGRQETSTI
SIO_010081: TRD_RS10285
subclass of: SO_0000673
so part of: TRD_RS10285
location: complement(226432..227358)
location: region:226432-227358:-1
so has part: feature:226432-227358:-1:exon

WP_012642637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226432-227358:-1:exon

TRD_RS10290
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10290
old locus tag: trd_A0239
so part of: sequence
location: complement(227355..228605)
location: region:227355-228605:-1
so has part: feature:227355-228605:-1:exon
subclass of: SO_0000010

position:227355:-1
position: 227355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228605:-1
position: 228605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227355-228605:-1:exon

TRD_RS10290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10290
old locus tag: trd_A0239
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020677782.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Nramp family divalent metal transporter
translation: MARRSRQLRVRGLASVLPYLGPAFVASVAYIDPGNYATNIESGAQFGYTLLWVILAANLAAMLIQSLSAKLGIATGRNLAELCRERFPRPVVWLMWIVAELVAMATDLAEFLGAALGFALLFHFPLLIGGILTGITTFAILALERYGHRPIEAVITSLVGVIAGCYVVETVLERPDWNAIARHALIPEFAGPESVLLATGILGATVMPHVIYLHSALTQHRIVPRTPAEAQRIFRFEVLDVVIAMGIAGLVNAAMLIMAASTFHARGLSDVGTIEEAHRTLQPLLGPLASTAFALSLLASGLSSSTVGTMAGQVVMQGFLHRTIPVWLRRGITMLPALIAIALGLDPTRTLVISQVVLSFGIPFALLPLILFTADRALMGALVNRRPTTLVASILALLIIGLNLWLLWTTFTGSGA
SIO_010081: TRD_RS10290
subclass of: SO_0000673
so part of: TRD_RS10290
location: complement(227355..228605)
location: region:227355-228605:-1
so has part: feature:227355-228605:-1:exon

WP_226980764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227355-228605:-1:exon

TRD_RS10300
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10300
old locus tag: trd_A0241
so part of: sequence
location: 229225..229608
location: region:229225-229608:1
so has part: feature:229225-229608:1:exon
subclass of: SO_0000010

position:229225:1
position: 229225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229608:1
position: 229608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229225-229608:1:exon

TRD_RS10300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10300
old locus tag: trd_A0241
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013559040.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HEPN domain-containing protein
translation: MARRAGDWFAQAAHDLELAELAAKHGRHEWACFAAQQAAEKALKALHLQLGQAVWGHAVTRLLEELPLAVPEELRDAARRLDAYYIAPRYPDAFPEGPPARYFGPQQSEEAIRHARAILDFVRAAMA
SIO_010081: TRD_RS10300
subclass of: SO_0000673
so part of: TRD_RS10300
location: 229225..229608
location: region:229225-229608:1
so has part: feature:229225-229608:1:exon

WP_012642955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229225-229608:1:exon

TRD_RS10305
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10305
old locus tag: trd_A0243
so part of: sequence
location: 229565..230002
location: region:229565-230002:1
so has part: feature:229565-230002:1:exon
subclass of: SO_0000010

position:229565:1
position: 229565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230002:1
position: 230002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229565-230002:1:exon

TRD_RS10305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10305
old locus tag: trd_A0243
EC number: 2.7.7.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015738528.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
translation: MPVRSSTSSVLRWPDRAAVLAAVERWARELELPGLVAVGVFGSYARGDWGVGSDVDLVVIVERSARPPIERPLDLPLEKLPVPAEAIVYTREEWERLPETSPHFAAVLAREAVWVFGRPDRLAGSGPEEALPPPGRADQRTDELP
SIO_010081: TRD_RS10305
subclass of: SO_0000673
so part of: TRD_RS10305
location: 229565..230002
location: region:229565-230002:1
so has part: feature:229565-230002:1:exon

WP_041437249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229565-230002:1:exon

TRD_RS10310
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10310
old locus tag: trd_A0242
so part of: sequence
location: complement(229978..231054)
location: region:229978-231054:-1
so has part: feature:229978-231054:-1:exon
subclass of: SO_0000010

position:229978:-1
position: 229978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231054:-1
position: 231054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229978-231054:-1:exon

TRD_RS10310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10310
old locus tag: trd_A0242
inference: COORDINATES: protein motif:HMM:NF012376.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallophosphoesterase
translation: MTRRQHDPLLIADLELPEESAREWATSSGYGAYLDVLRANGQMSTPTPTPTPSPTPTPAPTTTPTPTPTPPPTTNGATTVVAVGDIACDPGSSSWNNNNGTATACRHKYTAELAKRLAPAYVLALGDLQYEDGALAKFQQSYDPTWGQLKTLTKPVPGNHEYQTSGASGYYDYFGALAGDRSKGYYVFDLGNNWIAIAINSNCSKVGGCGAGSPQYQFVQNVLQANRGKNVLVFLHHPYWTTGNYYGQYKSSLGDLYRLFDQYGVDLSLAGHDHNYQRYAIQNADSVCNTGSVRHFVVGTGGKNVYDADVHAADEPCDEVRIDNAYGVLKLVLYSDHYEWAFVREDGTVLDQGSSSVR
SIO_010081: TRD_RS10310
subclass of: SO_0000673
so part of: TRD_RS10310
location: complement(229978..231054)
location: region:229978-231054:-1
so has part: feature:229978-231054:-1:exon

WP_012643120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229978-231054:-1:exon

TRD_RS10315
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10315
old locus tag: trd_A0244
so part of: sequence
location: 231142..231432
location: region:231142-231432:1
so has part: feature:231142-231432:1:exon
subclass of: SO_0000010

position:231142:1
position: 231142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231432:1
position: 231432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231142-231432:1:exon

TRD_RS10315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10315
old locus tag: trd_A0244
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873501.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSATVSSGKDQRNVWLGPLAGAAVLAVLFVVATLVRRSSFADEARPVMIGLSSAAAAIITVQGARTAAARRGWPGIIAGGAMIAMGLYTLVHVLR
SIO_010081: TRD_RS10315
subclass of: SO_0000673
so part of: TRD_RS10315
location: 231142..231432
location: region:231142-231432:1
so has part: feature:231142-231432:1:exon

WP_012642387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231142-231432:1:exon

TRD_RS10320
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10320
old locus tag: trd_A0245
so part of: sequence
location: complement(231455..231886)
location: region:231455-231886:-1
so has part: feature:231455-231886:-1:exon
subclass of: SO_0000010

position:231455:-1
position: 231455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231886:-1
position: 231886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231455-231886:-1:exon

TRD_RS10320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10320
old locus tag: trd_A0245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008479821.1
GO function: GO:0070967 - coenzyme F420 binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR03668 family PPOX class F420-dependent oxidoreductase
translation: MAVTLPPLVRTFLEQQRVGHLATVSRGGEPHVVPVCYVVADDTIYTPIDEKPKQPGRTLRRVRNIEETGRAALVVDRYDEDWTQLGWVLLRGRAELLAPGSPEQARAVELLRQRYPQYQAMRLETQSMIALRIERVSVWGKLE
SIO_010081: TRD_RS10320
subclass of: SO_0000673
so part of: TRD_RS10320
location: complement(231455..231886)
location: region:231455-231886:-1
so has part: feature:231455-231886:-1:exon

WP_012643102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231455-231886:-1:exon

TRD_RS10325
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10325
old locus tag: trd_A0246
so part of: sequence
location: 232297..232722
location: region:232297-232722:1
so has part: feature:232297-232722:1:exon
subclass of: SO_0000010

position:232297:1
position: 232297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232722:1
position: 232722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232297-232722:1:exon

TRD_RS10325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10325
old locus tag: trd_A0246
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011278082.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MERVVIYPEEILEGAPMQQRDRSVRDLKLIYPETGFRAMTLCLGVVEIEPGHHSPLHRHNCEEVYYVVQGMGELESDGVRYPLRPGCAALNRPNVLHRVFNTGSETLRLVVVAGIMLVPLLPQWPTPSPYEVFEGDTAGTD
SIO_010081: TRD_RS10325
subclass of: SO_0000673
so part of: TRD_RS10325
location: 232297..232722
location: region:232297-232722:1
so has part: feature:232297-232722:1:exon

WP_012643048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232297-232722:1:exon

TRD_RS10330
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10330
old locus tag: trd_A0247
so part of: sequence
location: 233458..233979
location: region:233458-233979:1
so has part: feature:233458-233979:1:exon
subclass of: SO_0000010

position:233458:1
position: 233458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233979:1
position: 233979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233458-233979:1:exon

TRD_RS10330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10330
old locus tag: trd_A0247
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003895885.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4242 domain-containing protein
translation: MPLFLAEYRIDATDRAQLEPLFAVIDRATREGGGEVIEFQVGQDLAVLYAVLEHADGQALRHELERAGAAPHDFAPVRLVGQSLDEVKAQRGAANYLVEWDLPASLTMEAYLQRKAEKSPLYAQVPEVRFLRTYVREDMAKCVCLYAAPDEEAVRRARQVVSAPVDRLTRVCS
SIO_010081: TRD_RS10330
subclass of: SO_0000673
so part of: TRD_RS10330
location: 233458..233979
location: region:233458-233979:1
so has part: feature:233458-233979:1:exon

WP_012643144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233458-233979:1:exon

TRD_RS10335
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10335
old locus tag: trd_A0248
so part of: sequence
location: 233990..235093
location: region:233990-235093:1
so has part: feature:233990-235093:1:exon
subclass of: SO_0000010

position:233990:1
position: 233990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235093:1
position: 235093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233990-235093:1:exon

TRD_RS10335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10335
old locus tag: trd_A0248
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: acyl-CoA/acyl-ACP dehydrogenase
translation: MTGTLAATLIDRAFQERLGALLEERAPWIDAAELPAQSTVRLLVTEGLLPTVERASPRVPAPFDLLRAGELLATVAWFDLASAFSLWCHMMTMLYLAWAEPGSVLREQWLGELTRAERDGSTALATALGHAQTGRPLPVQASGHASGGLVLNGFVPWASNLTERFLVVTPVQSGSDTLVVAVPSETPGVFVEPYPRLLALQATASTTLRFQDALVASEFVLARDALAFLRTVQPAFLALQASFCWGLAARALAEARGHLRGVNVVFEPDIAEAEAELTAAARALRSLLAQALGSADHELRCRALELRLATMRLACRAVALEAKTKGGQAYRAESGTARRLRESLFLPIQTPTEGQLLWELQRSNWST
SIO_010081: TRD_RS10335
subclass of: SO_0000673
so part of: TRD_RS10335
location: 233990..235093
location: region:233990-235093:1
so has part: feature:233990-235093:1:exon

WP_012642457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233990-235093:1:exon

TRD_RS10340
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10340
old locus tag: trd_A0249
so part of: sequence
location: 235060..235830
location: region:235060-235830:1
so has part: feature:235060-235830:1:exon
subclass of: SO_0000010

position:235060:1
position: 235060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235830:1
position: 235830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235060-235830:1:exon

TRD_RS10340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10340
old locus tag: trd_A0249
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007629772.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MGTAAIELVDVTKTYGHGRRVRAVLAGVSCTIPFGAVTVLLGPSGVGKSTLLRLMAGLEAPSSGVVRYGTGIEPRRDVRLVFQEPNLLPWLTVADNVTLGFRFALNRGRADFGLVAELLDRLGVSELAEVYPETLSGGQAQRVNLARALATRPRLVLLDEPFAALDPVTRRESQRWLRELVAELGLTAVLVTHDLEEALAVGDQLILLGGQPASVVGWWQVAEYAPDELRRALLNGYGMVQGSAASVESFVVGRFR
SIO_010081: TRD_RS10340
subclass of: SO_0000673
so part of: TRD_RS10340
location: 235060..235830
location: region:235060-235830:1
so has part: feature:235060-235830:1:exon

WP_012642530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235060-235830:1:exon

TRD_RS10345
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10345
old locus tag: trd_A0250
so part of: sequence
location: 235827..237077
location: region:235827-237077:1
so has part: feature:235827-237077:1:exon
subclass of: SO_0000010

position:235827:1
position: 235827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237077:1
position: 237077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235827-237077:1:exon

TRD_RS10345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10345
old locus tag: trd_A0250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004341166.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MKRGMTRRTFLRRAATTLSLTPLLAACGSAEKSETPATSSAAGGSPTVVVPSQRTSTATASGQLRIGYLPITDAAPLLLAHAKGFYREEGLSVEQPTMFRSWAQVAEAFQARQVDVVHLLMPLAIWMRFGQQVPVKLVAWDHVNGSALTVAERIERLEDLAGATVAIPFWYSIHNVLLQRLLERAGLRPILEGQPSASERTVKLVVLAPADMAPALANGSIAGYIVAEPFNALAEVQKAGKILRFSGDVWLDHACCVVMLHEEECVSRPDWAQAVVRAVVRAQRFARENRAEAAQLLAKRGDRGYLPQPLQAIERVLLDHDHDRYVREGVIRHPEWSAARIDFRPYPFSSYTAALIEHLRRTRVQGDASFLQQLDPLRAHEELVDDRFVRQALTEEGGPAVFGLPESLEREELIDP
SIO_010081: TRD_RS10345
subclass of: SO_0000673
so part of: TRD_RS10345
location: 235827..237077
location: region:235827-237077:1
so has part: feature:235827-237077:1:exon

WP_012642624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235827-237077:1:exon

TRD_RS10350
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10350
old locus tag: trd_A0251
so part of: sequence
location: 237074..237889
location: region:237074-237889:1
so has part: feature:237074-237889:1:exon
subclass of: SO_0000010

position:237074:1
position: 237074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237889:1
position: 237889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237074-237889:1:exon

TRD_RS10350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10350
old locus tag: trd_A0251
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006498126.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MTVRHHVRETLVGLAGIALLVLFWWAATSFLPPVGAFARRFAPEFALRALGELAASGLLWPHLVASAQRVGVGLALSALLGIPLGVVIGSVPWIARLLGPSLQLVRMVSPLAWMPLALLVFGAGSRSVVFLIVLATLWPIVLSTADGVMRVDPRWLLVGRSLGASRWELLRTIVWPGIRPRVLGGMRLAVGVAWIVLVPAEMLGVDSGLGYAILDARDRLDYGELMAVLLVIGMSGLALDGLARVVLRERPLVRRRGRRESLVVAVAERGN
SIO_010081: TRD_RS10350
subclass of: SO_0000673
so part of: TRD_RS10350
location: 237074..237889
location: region:237074-237889:1
so has part: feature:237074-237889:1:exon

WP_012642810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237074-237889:1:exon

TRD_RS13850
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13850
old locus tag: trd_A0252
so part of: sequence
location: complement(237959..238696)
location: region:237959-238696:-1
so has part: feature:237959-238696:-1:exon
subclass of: SO_0000010

position:237959:-1
position: 237959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238696:-1
position: 238696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237959-238696:-1:exon

TRD_RS13850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13850
old locus tag: trd_A0252
inference: COORDINATES: protein motif:HMM:NF016115.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cyclase family protein
translation: MPARGRLAGQDVLVFDLEQPRTPEMPIYPAHRPGYSYALHRRHSDPPAGPSAGPRSSASGLLLLMEHTGTHIDAPCHQAWHGRLHGDIDAITVAGPRGLTHLGVETVPPLVVPGALLDVAALHGREALSPGELVTAADLEACCTRNSLVLEPGMAILVAVPSATRPDGGAGRSSDPAHRRSCPWYQCPGDTRRSERSPRPGRAALSRTRLLNLGERFSHPCCNRLSGHALRFADRSMDAHPARSS
SIO_010081: TRD_RS13850
subclass of: SO_0000673
so part of: TRD_RS13850
location: complement(237959..238696)
location: region:237959-238696:-1
so has part: feature:237959-238696:-1:exon

WP_012642911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237959-238696:-1:exon

TRD_RS10360
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10360
old locus tag: trd_A0253
so part of: sequence
location: complement(238711..239388)
location: region:238711-239388:-1
so has part: feature:238711-239388:-1:exon
subclass of: SO_0000010

position:238711:-1
position: 238711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239388:-1
position: 239388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238711-239388:-1:exon

TRD_RS10360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10360
old locus tag: trd_A0253
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873466.1
GO process: GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosyltransferase family protein
translation: MELRRDLGGGEGDVLFGTETNLDIARALFELGGVLFGEFDLGPTAGRSPIYINPRVLISEPALLRRIAHLIHHEIQADQARRRPRLASFAAVAGVPMGGLHLATAYALVSDTPLIYVRPDAQEPALEGRIVPGQTVLVIDDLMTGGTSLLRTARILEEAGLTVRDFIVLIDREQGGAERLHAHGYHVMPILRLRTMLTYYFESGMIDSQRYRTAMDYLERTNRRG
SIO_010081: TRD_RS10360
subclass of: SO_0000673
so part of: TRD_RS10360
location: complement(238711..239388)
location: region:238711-239388:-1
so has part: feature:238711-239388:-1:exon

WP_226980754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238711-239388:-1:exon

TRD_RS10365
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10365
old locus tag: trd_A0255
so part of: sequence
location: 239531..240886
location: region:239531-240886:1
so has part: feature:239531-240886:1:exon
subclass of: SO_0000010

position:239531:1
position: 239531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240886:1
position: 240886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239531-240886:1:exon

TRD_RS10365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10365
old locus tag: trd_A0255
EC number: 6.3.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873467.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: folylpolyglutamate synthase/dihydrofolate synthase family protein
translation: MDYFAALRFLRDRAGYDRGFVVNPFADEGIGLARTAWLCSALGDPHRRYRSVHIAGTKGKGSTAALLSSMLQAAGYRVGLYTSPHLHTLRERIQIDGQPIAPETFGTLMAELAEVDAALQRAHPDWGAATAFELVTVLAFAAFARVPVDIAVIEVGLGGRLDATNVILPDVALITRIGYDHMAILGSTLAAIAREKAGIVKPGRPVVSAPQEPEATRVIEAVAQERGAPLWLGGRDWQVTGTWRRFAFHAPGWELADLALALRGSHQVENAGVALASLPWLARVEMVAPESAIRQGLATAVWPGRLELLRENPSVVVDGAHNRESAQRLAEAVHESFRWRRLWLVLGIMRDKEIERIVAALAPLADALFAVEGFAPRAASAERLLAAWAASTVGKPAASYRSVEDALRAALEQADPADLVLVTGSLSMVAAAREALGVAVSDPRERELLLG
SIO_010081: TRD_RS10365
subclass of: SO_0000673
so part of: TRD_RS10365
location: 239531..240886
location: region:239531-240886:1
so has part: feature:239531-240886:1:exon

WP_143714769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239531-240886:1:exon

TRD_RS10370
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10370
old locus tag: trd_A0256
so part of: sequence
location: 241017..242141
location: region:241017-242141:1
so has part: feature:241017-242141:1:exon
subclass of: SO_0000010

position:241017:1
position: 241017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242141:1
position: 242141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241017-242141:1:exon

TRD_RS10370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10370
old locus tag: trd_A0256
inference: COORDINATES: protein motif:HMM:TIGR00350.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LCP family protein
translation: MAEPPAQERPEEGRASKDVWRRWQSARRIVAVTLIAGMLAAGGWVAWYVVQLGSAANEAYHDIFVTPAPRPSAPVTSAPRPSVPPTTIRSSTPTATPTEFPEWRGSEPVTVLLVGIDTTPERAGAGSLPLADAIILAQLDPVGKRAVMLSIPRDLLVEIPGIGWDRINAAYAAGEASGSSGPALLVAAIERNFAVHVDGFAEVDFAGFVRIVDLLGGIVVDVPAPIKDDMFPGPNFSYQRLSFAPGLQWMDGSRTLAYVRTRHDDNDLARGLRQQQVLRALPERALRLDALRRAPQLLAALGDAVRTDLTPQQVLGLARLALELDASRITSASLAGMVQDATLPRGAAVLVGHWPAIRSEVARLFGPPKTSSVR
SIO_010081: TRD_RS10370
subclass of: SO_0000673
so part of: TRD_RS10370
location: 241017..242141
location: region:241017-242141:1
so has part: feature:241017-242141:1:exon

WP_052294130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241017-242141:1:exon

TRD_RS10375
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10375
old locus tag: trd_A0257
so part of: sequence
location: 242209..243120
location: region:242209-243120:1
so has part: feature:242209-243120:1:exon
subclass of: SO_0000010

position:242209:1
position: 242209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243120:1
position: 243120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242209-243120:1:exon

TRD_RS10375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10375
old locus tag: trd_A0257
inference: COORDINATES: protein motif:HMM:NF022112.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GerMN domain-containing protein
translation: MRRRDFAFWLALSSLAAACRSEATPTPNTGAVPTISPTPASTPVPVATPTATPPPATPGPTPTAQRTLTVALYFLRQEKLAVARRAVGETPRIGTAALQELLAGPTDQEISFGLSTEIPPGTRLNDLAIVDGVATVDLSADFAAGGGSFSMQARVAQVVFTLTQFSSVRAVRFRLDGQPVSAIGGEGVVVEPPPSRADFEDLLPLIFVEVPGPGEAVTSPLRVAGSANTFEAMFMVRLSTAEGAVLYEEPAMATSGSGTRGTFDLTIPFVVSQPVDGILRLWEYSAKDGSEVNIVEIPLRLVP
SIO_010081: TRD_RS10375
subclass of: SO_0000673
so part of: TRD_RS10375
location: 242209..243120
location: region:242209-243120:1
so has part: feature:242209-243120:1:exon

WP_012643171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242209-243120:1:exon

TRD_RS13855
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13855
old locus tag: trd_A0258
so part of: sequence
location: 243141..243986
location: region:243141-243986:1
so has part: feature:243141-243986:1:exon
subclass of: SO_0000010

position:243141:1
position: 243141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243986:1
position: 243986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243141-243986:1:exon

TRD_RS13855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13855
old locus tag: trd_A0258
inference: COORDINATES: protein motif:HMM:NF024109.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MEVRERVETLGDLWLWVAEAGPSEAPPILLLHGLYDRWETWEPVVPALAERFRVIAFDMRGHGRSSQPAGGYTLRDYADDAVRLLARLRPSRPIVVIGFSLGALVAIVLAAEHPELIRGVVLVDPPLVEPDEGTRLWLRALLEAKRAGIEAAYELARELDPDGTPEEWQQSALWLCSTADGPILALLDEGRRPDPWELLPHLSQPVLVLQADPVFGGVLDDETAQRALAQLRQGELVAMPGCGHAIHRTCPDDFLEVVLEFLARLDRPATGEYVGLEHPAG
SIO_010081: TRD_RS13855
subclass of: SO_0000673
so part of: TRD_RS13855
location: 243141..243986
location: region:243141-243986:1
so has part: feature:243141-243986:1:exon

WP_012642884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243141-243986:1:exon

TRD_RS10385
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10385
old locus tag: trd_A0260
so part of: sequence
location: 244133..245413
location: region:244133-245413:1
so has part: feature:244133-245413:1:exon
subclass of: SO_0000010

position:244133:1
position: 244133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245413:1
position: 245413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244133-245413:1:exon

TRD_RS10385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10385
old locus tag: trd_A0260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSTGTRVLVRQPSRTGILLLRAKGQARSPRCAGQWLRGSVLLVALVLLVTGSGCRRAEESPAVVYLFEPGQLVALDPRDGHAVWRAAVPLDYSCAVSPSPDGRWVALVSERLVLVPTSQPEKMLVVDPPPGWFFTSCNLPYGTFVSTITVLSWVQQKVLFAMLRKNLPYPDEWAVAAYDVETRSWRPWMRQVPGYCPLLGSPVAHFAATCAVLPSGIRNGLRLAQASGGLLAIDPTSGVLLDQLPIPRAELAARGLRNDEPIVTAATDDRSVVLLLRNALLVVLDRDGTFRQAVAVDRELGLAGRAYGIALRLVPKDRVAWVVVQETGASDRPILALVDLRDQSVVRVVDLPGFVRDVDFLPDGTVVLNRSVETAAEQSTGAPTWTVVRRDLRRGDERVLATLTDDGYCCWIGPLAPEARAASGR
SIO_010081: TRD_RS10385
subclass of: SO_0000673
so part of: TRD_RS10385
location: 244133..245413
location: region:244133-245413:1
so has part: feature:244133-245413:1:exon

WP_012643222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244133-245413:1:exon

TRD_RS10390
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: menH
locus tag: TRD_RS10390
old locus tag: trd_A0259
so part of: sequence
location: complement(245410..246252)
location: region:245410-246252:-1
so has part: feature:245410-246252:-1:exon
subclass of: SO_0000010

position:245410:-1
position: 245410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246252:-1
position: 246252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245410-246252:-1:exon

TRD_RS10390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: menH
locus tag: TRD_RS10390
old locus tag: trd_A0259
EC number: 4.2.99.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008479374.1
GO function: GO:0070205 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity [Evidence IEA]
GO process: GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase
translation: MRVWDEERTIAVRGVTYRVCAAGQGPPLALLHGFAGSSAHWAPLAPELVARGWRVIAPDLLGHGRTDAPSAPTRYAAAEQVADLASLLGELVSGPVRLLGYSMGGRLALHLALAHPERIAALVLESASPGLDDPAERAARQRADEELATAIEQRGMDWFADYWERLPLFASRQRLSAERRAALRAEWLAQRPHGLGASLRGFGTGSMPAVWDRLSELRMPVLVIAGALDTRYAALSQAMAARIPASQLVIVPAAGHTVHLEQPAAFLAALERFFRQLPDR
SIO_010081: TRD_RS10390
subclass of: SO_0000673
so part of: TRD_RS10390
location: complement(245410..246252)
location: region:245410-246252:-1
so has part: feature:245410-246252:-1:exon

WP_041437253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245410-246252:-1:exon

TRD_RS10395
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: menD
locus tag: TRD_RS10395
old locus tag: trd_A0261
so part of: sequence
location: complement(246249..248000)
location: region:246249-248000:-1
so has part: feature:246249-248000:-1:exon
subclass of: SO_0000010

position:246249:-1
position: 246249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248000:-1
position: 248000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246249-248000:-1:exon

TRD_RS10395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: menD
locus tag: TRD_RS10395
old locus tag: trd_A0261
EC number: 2.2.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009711802.1
GO function: GO:0070204 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase activity [Evidence IEA]
GO process: GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase
translation: MEHRTALGATVTAFVTALADAGLRHACFAPGSRSTPLVLGLAREPRIRLWDHLDERSAGFFALGLARGLDEPVAVVTTSGTAAANLLPAVVEANLAQVPLVVLTADRPPELRDAGAPQTIDQLRLYGTHVKWFSELPPPDGTPLVQRAAASAARRAVALARAFPPGPVHLNLPYREPLVPHFGLSIAAPAGAVLSGTPQLDERELAEVAALLARRRRGVVLAGPQPDPALAPALVELASLLGYPILADPLSQLRAGPHPRDLVLDAYDAVLREPEALPALQPELVLRVGAIPTSKPLQLALEAWENTEQILLAAGNWPDPAHRASWVLQGALRPTVRALTRALALATPRPDTDWLARWRAVDRAARAALEAGLAELDEPFEGRVFRELAELLPDGAALVAGNSMPVRDLDAFFPSVPQRVRIFANRGANGIDGVTSTALGIAAARTGPTVLVTGDLSFYHDLTGLLAARRHRLRATIVLLHNDGGGIFSFLPQAHEVPEQFEFLFGTPHGLDFQHAAALFGLAYARPTDRSSVRDALAAALVADRTSIVELRSDRQRNVVLHQELWARARAAVRDALAAGTRR
SIO_010081: TRD_RS10395
subclass of: SO_0000673
so part of: TRD_RS10395
location: complement(246249..248000)
location: region:246249-248000:-1
so has part: feature:246249-248000:-1:exon

WP_012642667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246249-248000:-1:exon

TRD_RS10400
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10400
old locus tag: trd_A0262
so part of: sequence
location: complement(248004..249389)
location: region:248004-249389:-1
so has part: feature:248004-249389:-1:exon
subclass of: SO_0000010

position:248004:-1
position: 248004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249389:-1
position: 249389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248004-249389:-1:exon

TRD_RS10400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10400
old locus tag: trd_A0262
EC number: 5.4.4.2
inference: COORDINATES: protein motif:HMM:TIGR00543.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008909 - isochorismate synthase activity [Evidence IEA]
GO process: GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isochorismate synthase
translation: MSCRVLDAPQATLQELWPLAERQARAHDRPVILSCAEHCEPVDPIALFARAASHLPRVLWLVPEREEALVGLAGQRLPLQSVTSPSLPLPARLAAAWRALAQDALAEGPLPPLAVAGLAFDPADERPDPWWQPFGQGQLLLPRLLYRQQGALACRSVQAAVFPGEREPRALLTWPTSSLPTPSAAPRSVVQHELVRPDDWRRMIQHALAAIAAGDLRKVVLARARELVAADPFPLEQALRELAARYPSCTVFAIGIGETVFLGASPERLARVAHGTVATVALAGSRPRASSPEQDHRAAEELRRSDKDRHEHALVVEAIRSALAPLCTSLSIPEEPVVVSMANVHHLATPISGILHDGASVLDVVARLHPTPAVGGTPREAALAFIRQREPVPRGWYAGALGWIEASGDGEIVVGLRSGLVRSQQARLYAGCGIVADSDSVAEWAEAEAKFRPMLEALAGG
SIO_010081: TRD_RS10400
subclass of: SO_0000673
so part of: TRD_RS10400
location: complement(248004..249389)
location: region:248004-249389:-1
so has part: feature:248004-249389:-1:exon

WP_012642614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248004-249389:-1:exon

TRD_RS10405
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10405
old locus tag: trd_A0263
so part of: sequence
location: complement(249386..250036)
location: region:249386-250036:-1
so has part: feature:249386-250036:-1:exon
subclass of: SO_0000010

position:249386:-1
position: 249386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250036:-1
position: 250036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249386-250036:-1:exon

TRD_RS10405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10405
old locus tag: trd_A0263
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008479382.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MAQLTNQPTSQVLQPRARERRERILDAALAVFTRRGYREATMDEVAEAAATSKGGVYFHFPGKEALFLALLERSAALLLQRTQLALERTPDPAGKLDAALDVVLRLFASHRDLARLFLVEALAAGPAIQEALLAIRRRFAALIASELARAREDGLIGPLDPQLAATACFGAIYEVVTQWLLSGSPADLAEAAPELRRLLRRLVGLPDRSLDEDGTL
SIO_010081: TRD_RS10405
subclass of: SO_0000673
so part of: TRD_RS10405
location: complement(249386..250036)
location: region:249386-250036:-1
so has part: feature:249386-250036:-1:exon

WP_012643125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249386-250036:-1:exon

TRD_RS10410
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10410
old locus tag: trd_A0265
so part of: sequence
location: complement(250728..251594)
location: region:250728-251594:-1
so has part: feature:250728-251594:-1:exon
subclass of: SO_0000010

position:250728:-1
position: 250728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251594:-1
position: 251594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250728-251594:-1:exon

TRD_RS10410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10410
old locus tag: trd_A0265
inference: COORDINATES: protein motif:HMM:NF015000.2
GO function: GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO process: GO:0006629 - lipid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerophosphodiester phosphodiesterase family protein
translation: MQSTELRHELFRHWPARPWVIAHRGASGLAPENTLTAFILAVEQGAHGIECDLRLTRDGHVVICHDASVQRTTNGHGLVHEHTLAELRLLDAGYTFTTDRGASYPFRGLGLRIPTFEELLAALPNHVVINAEIKSAPWDPADRQRGQAIAERVVALVRQRPDLRARLLVSSFDAAVLDTVRRLDPELAVALCTLPLAPLPEQLRGTLERGYDAFHPMDVGFDQHGAAVIAAAHEAGVPVNVWTVDVPDRAIELVALGVDGIITDYPEATRHALTRAASATATARPVTP
SIO_010081: TRD_RS10410
subclass of: SO_0000673
so part of: TRD_RS10410
location: complement(250728..251594)
location: region:250728-251594:-1
so has part: feature:250728-251594:-1:exon

WP_012642885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250728-251594:-1:exon

TRD_RS10415
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10415
old locus tag: trd_A0266
so part of: sequence
location: 251796..252743
location: region:251796-252743:1
so has part: feature:251796-252743:1:exon
subclass of: SO_0000010

position:251796:1
position: 251796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252743:1
position: 252743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251796-252743:1:exon

TRD_RS10415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10415
old locus tag: trd_A0266
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012876222.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter permease
translation: MKVLERTEAATRVRPLAGERLERLRQAIDEWPLFWLLVAPNLILLVVFTYWPLVYNAYLSLMQWDLISPVKIFVGLENYRFLLEDSEFREVVRNTVVFTLGTVGGTMLLGLAFALVLDQPLRGLALARGVVFAPYVLSGAAVAVFWVNMLNPRFGLVAQVASWLGTVSPDWLNHPRLAMVAVILVYVWKNVGFSTIVYLAGLQRIPQELYEAATVDGAGVWQRFRSITLPQLGPITLFLLVVSTIASFQAFDLIRVLTDGGPVNATTTLLFYIWEQGFVAFNAGRAAAAAVVLFALLAVISWLQVRLGERRVSYD
SIO_010081: TRD_RS10415
subclass of: SO_0000673
so part of: TRD_RS10415
location: 251796..252743
location: region:251796-252743:1
so has part: feature:251796-252743:1:exon

WP_143714771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251796-252743:1:exon

TRD_RS10420
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10420
old locus tag: trd_A0267
so part of: sequence
location: 252736..253578
location: region:252736-253578:1
so has part: feature:252736-253578:1:exon
subclass of: SO_0000010

position:252736:1
position: 252736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253578:1
position: 253578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252736-253578:1:exon

TRD_RS10420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10420
old locus tag: trd_A0267
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014173706.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate ABC transporter permease
translation: MTERRNWRRAIATGLRGLLVGLVVVIMGLPLYWVATGALKTNQEIYTFPPVWIPRQPQWGNFVEAWQAVPFGRFFVNSIVTTLGAVALELLFALLSAYALVFVRSRGKGLVFAVVIAALLVPGTVTLLPNYLTVARLGWINTYQGLIIPVAAVAFGVFLFRQHFLTLPRDLLDAARLDGCGHLGLLRHVVVPLSQPVIVTFLVIYLVAHWNDFLWPLVVTNRLEWRTVPVGVAYLYQVEGVQNWGPILAGTVMALVPMLLVYVVAQRWIVKGIGGGALKG
SIO_010081: TRD_RS10420
subclass of: SO_0000673
so part of: TRD_RS10420
location: 252736..253578
location: region:252736-253578:1
so has part: feature:252736-253578:1:exon

WP_012642526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252736-253578:1:exon

TRD_RS10425
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10425
old locus tag: trd_A0268
so part of: sequence
location: 253637..255067
location: region:253637-255067:1
so has part: feature:253637-255067:1:exon
subclass of: SO_0000010

position:253637:1
position: 253637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255067:1
position: 255067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253637-255067:1:exon

TRD_RS10425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10425
old locus tag: trd_A0268
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015940936.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MNKSLTRRRLLVALGGLSSAALLAACGGTEATPTPAPAAGSAAQASPTPAAAAASPTPAAASPTAPAVVTSPGSTVKVVYWGSFSGNLGEAEQGMVKRFNESQKDVVVDYQYQGNYEETAQKLTQALAAGTTPDIVLLSDVWWFKFYLNDVLLPLDDLFAANKIDTKDYVDPLIEEGTRKGVVYWVPFARSTPLFYYNKQVWQEAGLPDRGPQTWAEFLEWVPKLLKKEGDKTTRYAFAHPSAASYIAWLFQPVVWQHGGRYSDPDFTIRIQEDPAVEAGRLYLASVRDGWAVPTKDIVADFTNGAAAAMMASTASLRGILKTATFPVGTAFLPEGPKGFGCCTGGSGLAILKNKPKEIQEAAFKYLAFATDPENTMWWSQNTGYMPVRKSAIASQEMQNFYKENPNFKTAVEQLPKTRPQDAARVWIPNGDQIIGKGLERVTVQQEDPAGVFADVAKTLEREAKPVVEQLKRREG
SIO_010081: TRD_RS10425
subclass of: SO_0000673
so part of: TRD_RS10425
location: 253637..255067
location: region:253637-255067:1
so has part: feature:253637-255067:1:exon

WP_012642381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253637-255067:1:exon

TRD_RS10430
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10430
old locus tag: trd_A0271
so part of: sequence
location: complement(255477..255992)
location: region:255477-255992:-1
so has part: feature:255477-255992:-1:exon
subclass of: SO_0000010

position:255477:-1
position: 255477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255992:-1
position: 255992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255477-255992:-1:exon

TRD_RS10430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10430
old locus tag: trd_A0271
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873464.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUDIX domain-containing protein
translation: MTAPNALAVFTVTLLFAGERCLLLHRHTQRHRFPDLWTGLGGRVEPTELADLASAARRELAEETGIPLHDVPSLVLRRVLLQHRPASAELELLLYFTGELASPLTISASREGTLHWVAPTDLPALPLVDNARLVLPHLVADRARDPAASEPVKLGIARCDEQGRVVAIAWA
SIO_010081: TRD_RS10430
subclass of: SO_0000673
so part of: TRD_RS10430
location: complement(255477..255992)
location: region:255477-255992:-1
so has part: feature:255477-255992:-1:exon

WP_012642967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255477-255992:-1:exon

TRD_RS13860
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13860
old locus tag: trd_A0272
so part of: sequence
location: complement(255997..256392)
location: region:255997-256392:-1
so has part: feature:255997-256392:-1:exon
subclass of: SO_0000010

position:255997:-1
position: 255997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256392:-1
position: 256392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255997-256392:-1:exon

TRD_RS13860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13860
old locus tag: trd_A0272
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSEIETWDGTPPDEDLGWLTEPPLYWIVEHSEPLPPIPGLTYLATNRYADCAADQTLVATPDEPELIELLRGAPGVQAIEPGYFRYFFQGDSVIAVVNSAAITWFDSVDEALRWDPFAESGSSFPPGPTC
SIO_010081: TRD_RS13860
subclass of: SO_0000673
so part of: TRD_RS13860
location: complement(255997..256392)
location: region:255997-256392:-1
so has part: feature:255997-256392:-1:exon

WP_052294131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255997-256392:-1:exon

TRD_RS10440
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10440
old locus tag: trd_A0273
so part of: sequence
location: complement(256639..257022)
location: region:256639-257022:-1
so has part: feature:256639-257022:-1:exon
subclass of: SO_0000010

position:256639:-1
position: 256639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257022:-1
position: 257022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256639-257022:-1:exon

TRD_RS10440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10440
old locus tag: trd_A0273
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014066225.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPIEVTPQPPDIDQRALRVFLKAIELVGGPRQLVELRRLTWLPSLMEAAYAVVLAEEHHWPAEEIARFLGVSSAAARHLLRAPEAAVLERLRGEEPSEHNVHIAGGLAKLALEALQREEESGTHQS
SIO_010081: TRD_RS10440
subclass of: SO_0000673
so part of: TRD_RS10440
location: complement(256639..257022)
location: region:256639-257022:-1
so has part: feature:256639-257022:-1:exon

WP_012643312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256639-257022:-1:exon

TRD_RS10445
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10445
old locus tag: trd_A0274
so part of: sequence
location: complement(257019..257918)
location: region:257019-257918:-1
so has part: feature:257019-257918:-1:exon
subclass of: SO_0000010

position:257019:-1
position: 257019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257918:-1
position: 257918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257019-257918:-1:exon

TRD_RS10445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10445
old locus tag: trd_A0274
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013907710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KaiC domain-containing protein
translation: MRERQEPLVEAVTPLQELAQRVPQLEGVPTGVPGLDELFFVTEWREGKAVRRVLGGIPRYAVLQVTGVSDTGKSLMVEQFAVERARRGEPCIFLTTEAPGPFVAGSLQLRAQAMGVPREAIDRAIILIDAATHTSLTHDLGTLLSTLAFAIRTYHAQAVVIDSLTGFYEAREMQAREIVRPLYLFLKKWHQTALAVSQKRSGHELLTAEAAGGFAVGHILDGSLVLAKQPVLSYQQAKLYRTPIGETVRLFRIDGCRMSGHDTATHLLEITPEGLVRIGPRLSDLARGAAVSTGEEEVE
SIO_010081: TRD_RS10445
subclass of: SO_0000673
so part of: TRD_RS10445
location: complement(257019..257918)
location: region:257019-257918:-1
so has part: feature:257019-257918:-1:exon

WP_012642838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257019-257918:-1:exon

TRD_RS10450
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10450
old locus tag: trd_A0275
so part of: sequence
location: 258143..259816
location: region:258143-259816:1
so has part: feature:258143-259816:1:exon
subclass of: SO_0000010

position:258143:1
position: 258143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259816:1
position: 259816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258143-259816:1:exon

TRD_RS10450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10450
old locus tag: trd_A0275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873465.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent thymidylate synthase
translation: MATIPTRLPETAFPFRSPPPTVRLVRSESAAHPFALTIAAAWSCYGARPASVERVAELFAGNGEATKAARRERAAALYPDLFTAGHHTTFQHAHFVFVLDGVSRLAIWSFFHHHPFYNSEQVSQRYREVTGATMVTPELPEPLAALYRAAMERALSGYRRLVELLTPDMARRYAEVFPARARSQRPEVQERVRTAVQRRAQEVARYVLPLATPAHLYHTVNALTLLRYYALANQLDVPREVRYVVNRMVEEVLAVDPNFLGAPGHPLDPQVLALEDTLEYRALRAFSEAVERSASEVFFREFDAALGPYHSRLVAYTPDAERVLADAVRTVLGRTRSELDDDTAIALVLDPARNHYLGHPLYLAMHSKLMQTLNHVSFTFQKRISGAEDAQNQRHRGTASSGPVLLAHLREEPDVIVPEDIARVPEALEEYWATIRVLWETKNRLLDAGVAPEYALYLLPNAHHVRFYESGTLLTYFWKWVKRLCFDAQREIWETARQETEQVARVLPRIGRYVAQPPCVLRDQAGLHPPCPEGERYCGVPVWRGYDPATLRERRLL
SIO_010081: TRD_RS10450
subclass of: SO_0000673
so part of: TRD_RS10450
location: 258143..259816
location: region:258143-259816:1
so has part: feature:258143-259816:1:exon

WP_012643046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258143-259816:1:exon

TRD_RS10455
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10455
old locus tag: trd_A0276
so part of: sequence
location: complement(260108..261037)
location: region:260108-261037:-1
so has part: feature:260108-261037:-1:exon
subclass of: SO_0000010

position:260108:-1
position: 260108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261037:-1
position: 261037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260108-261037:-1:exon

TRD_RS10455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10455
old locus tag: trd_A0276
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHPPAENVRVTHLAFADESHWNTGRYRALGLVTLEAQWQVDIEQAIKENLIKHGITGELKWSKIDRDRDRDAACDLLSTALRLIAQNQLRVDVLIWDIEDSRHKVRRRDDLNNLQRLLFRICMVVLTRRWPAEACWAIYADQQSGIDWDNLPLMLRRGLARHHRQQPPQLIESVSSPSIAELRPVTSHATPIVMLADLFSGLAVFSHEHWTDFQEWRQEQRGQRRLPPTQENERLLQLSKRTKMRFSVLDTVLTTCHQLKVDTTLDTCEGLRTRDPACPLNFWFYRPQGAYDKAPQKQKKVNGEGFQRR
SIO_010081: TRD_RS10455
subclass of: SO_0000673
so part of: TRD_RS10455
location: complement(260108..261037)
location: region:260108-261037:-1
so has part: feature:260108-261037:-1:exon

WP_012642681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260108-261037:-1:exon

TRD_RS10460
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10460
old locus tag: trd_A0277
so part of: sequence
location: complement(261060..261491)
location: region:261060-261491:-1
so has part: feature:261060-261491:-1:exon
subclass of: SO_0000010

position:261060:-1
position: 261060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261491:-1
position: 261491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261060-261491:-1:exon

TRD_RS10460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10460
old locus tag: trd_A0277
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNMFELVAAFMTAAATTITAVLTALRYRHERALERRAFVRATIIEVTQSENGQSRNSYRLKLHNAGKARATNLRLLLDGQEARPYEAVGAMAIMSRIPHHLEPGGEALLRFTLFLGGDIPTKLTVLWDDLAGSSHCSSLDLSV
SIO_010081: TRD_RS10460
subclass of: SO_0000673
so part of: TRD_RS10460
location: complement(261060..261491)
location: region:261060-261491:-1
so has part: feature:261060-261491:-1:exon

WP_012642588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261060-261491:-1:exon

TRD_RS10465
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10465
old locus tag: trd_A0278
so part of: sequence
location: 261946..265020
location: region:261946-265020:1
so has part: feature:261946-265020:1:exon
subclass of: SO_0000010

position:261946:1
position: 261946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265020:1
position: 265020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261946-265020:1:exon

TRD_RS10465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10465
old locus tag: trd_A0278
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013496238.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF499 domain-containing protein
translation: MAKTLAELCIPREWVFDPSVRDTVHDIDELDQLDPERFFAENYVTEGMRQLLSEAFKRLEGRTENASGIFLLSQSMGGGKTHNLLALGLLAKYPKWREPVMGSFYRPGPLGSVRVVAFSGRKTNTPYGIWGEIAERLNRREVLRDFYSPLRAPGVENWVELLRGDPVLLLLDELPPYFQAARAIQVGQTTLDHLTTVALANLLVAVASGKLPNVCVVLTDLRAQAYEAGSTAISEALRNLELEANRTATRIDPVRLNTAELYAILRQRLFKALPSDAEISEVADAYAQALEQARVLDLTAFPPQAVRSEILSSYPFHPGIRDLFARFRENPGFQQTRALIRIMRIVVAQLWSAGAARYKFLIGAHDVDLSRSDMISEIRQINAALENAIAHDIVDERGGAVAQQIDAELGGSGARDAATLIFLSSLSLAVNPVLGLDRSEIFGYLAEPGRDLTQVREALDRLQQRAWYLHPTAAGKLLFKNVENLNAKLESYARGLRDERELELRDRLREMFAPKVGNCYQVVEPLPALDQIQLSPERVTLIVFRPLPTALDEVRRWWENQQYKNRVLFLTGTPSGYERVIERAAYLRAIRQILQEFKQQNLPETDPQFIEALKIAEREESAFYLACRETFQILYYPHRTGLVQVELDPRYVANRYEGEQQIVEALKAVGKFREDTGPDSVGFRQLLESRLWPEGQKEVLWSEIKRRAATDAGWVLHHPRALDHLKDALVQRDIWRDIGGGYIQRGPFPKPKTSVQVQRLFRDHNTGEANLRIQPLHGDTIYYSFDGPPTTQSAKLEGNQLTTRALRIWFLAVDSRGEHETGEPVCWTNDLEVKYRFYQQGEQRMCELRAIPEGEIRYTLDGSSPERSGIRYEGPFPVPSNTRTILAQAVADGLRSPVLQIDVPMDPIRPTVDPRKPALWRRRHKLDDTGDTYRFLESIERHGARLRGITATVAREQRWAQLSADPQTEFTASQIREMLEALRQYIPSGLVTLDAEQVWTETGQQLLDLVADLRTELRSEEVQQ
SIO_010081: TRD_RS10465
subclass of: SO_0000673
so part of: TRD_RS10465
location: 261946..265020
location: region:261946-265020:1
so has part: feature:261946-265020:1:exon

WP_012642488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261946-265020:1:exon

TRD_RS10470
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10470
old locus tag: trd_A0279
so part of: sequence
location: 265017..265640
location: region:265017-265640:1
so has part: feature:265017-265640:1:exon
subclass of: SO_0000010

position:265017:1
position: 265017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265640:1
position: 265640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265017-265640:1:exon

TRD_RS10470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10470
old locus tag: trd_A0279
inference: COORDINATES: protein motif:HMM:NF024049.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3780 domain-containing protein
translation: MTRRRQIYDFGFDPSQGGHHFELSDEGESVTLVEWFAWNGSDRGEEEPLLPAPEPKVHLDRYRWSRIAAAVADEFNVRLRRAGLRPATWKTRTLLAPHFGKELALLMWAVEDVDPSLIPNVIANWRGFAPEERWWLYTTINATAGHPEHGKDRGWRKAIRIALAENPTEGTPSSALRELAPLLEAQERRSRRERRRPEQPRLPLGES
SIO_010081: TRD_RS10470
subclass of: SO_0000673
so part of: TRD_RS10470
location: 265017..265640
location: region:265017-265640:1
so has part: feature:265017-265640:1:exon

WP_012643211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265017-265640:1:exon

TRD_RS10475
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10475
old locus tag: trd_A0280
so part of: sequence
location: 265659..268598
location: region:265659-268598:1
so has part: feature:265659-268598:1:exon
subclass of: SO_0000010

position:265659:1
position: 265659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268598:1
position: 268598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265659-268598:1:exon

TRD_RS10475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10475
old locus tag: trd_A0280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013496236.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1156 domain-containing protein
translation: MQTGEGPHAAPHPVAETVRAQGDAPAFIEVQFPVSKLSKECYKERKAGSGQTLNPLGKWWGRKPLVLVRAILLGLLMPATDDPAADREAFLAALTMDDDGMLRRFAGQASPADLAPFCTPRERAEYFVSENGKLSWRPGLSAADREHLKRRAFLRMGYDDRLRFCLRPEEVDGPSEAAWERINRHLGTTARNLPDLVRQLGERRFGHVPRVGDAFCGGGSVPFEAARLGCEAYASDLNPVAVLLTWGALALTGGGPEVVERVRAAQRRVFEDVRRQVEAWGIERNEEGWVADAYLYCHEVRDPLTGWWVPLAPTWVISRKRRVVAKLVPDPVTKRFAIEIHEGVSEAELRRAEEDGTWASGVRCPVDRDGNWLPPAQRQVTSAEQLRGRTGLRPWENDDLVPRPDDVFQERLYCIRWIDPQTGERFYRAPTAADLAREQRVLELVRARFAEWQDKGYLPSARIEPGYNTDQPVRERGWTHWHHLFNPRQLLLHGLLAERAAQEAGLEAAALLLMLGRVANWNSRLSLWNRDHEKIDQTFLNQALNTLVDYACRAMGNLETAFCARLAVAPVAGPYHVQPADARAVEWEADIWITDPGYGDNVNYHELSEFFLAWYEKRLPQLFPGWYADSKRALAVKGEGETFRLALAECYRNLARRMPDDGYQVVLFVHQDPEMWVDLSLVLWAAGLQVTAAWTVLTETPRGIRSGNYVQGTVLLVLRKRQGDRRGELVDLYPEIRAEVERQLETMLALDPKDDPNFGDADYQLAAYAAALRVLTSYSAIGDIDVERELRRPRRQGEVTPIGRIIEQAVRIATDYLVPDGLERTVWRQLSPEERLYLKGIEIEAHGEAREGAYQEFARTYGARDFRSLLASRSANRARLKTPSEFGNRELRPIGQSGFGGTLLRHVLFAIYRTASDPEQDPRPARQYLRQEVPDYWQARQTIIALLQYLGTKPVGLAHWQPDVQAARRLKAVVEADTL
SIO_010081: TRD_RS10475
subclass of: SO_0000673
so part of: TRD_RS10475
location: 265659..268598
location: region:265659-268598:1
so has part: feature:265659-268598:1:exon

WP_012642426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265659-268598:1:exon

TRD_RS10480
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10480
old locus tag: trd_A0281
so part of: sequence
location: 268611..271313
location: region:268611-271313:1
so has part: feature:268611-271313:1:exon
subclass of: SO_0000010

position:268611:1
position: 268611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271313:1
position: 271313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268611-271313:1:exon

TRD_RS10480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10480
old locus tag: trd_A0281
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003361843.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helicase-related protein
translation: MLLRYSSRRAPLRAFLTEALDGALAYDRIAGFFSSSILEVAGEPLERMAPGARVRVVANSALQPLDVATARAAKAAMYAEWCRSLPEYLPPRLKERLRRLYTFLASGQLQVRVLPDTYFGLIHGKAGVITRADGSRIAFLGSVNESQEAWEVNYELLWADDSEAGVSWTIEEFEALWHHAGAVDLADAVVRDIERLTRRIVVPSIAEWREQYRAEPAAAVVELPVARQGTGLWAHQKYFVKLAFDLHRERGARLLLADEVGLGKTVQLGLAAKLMALWGGGNVLVLVPKPLLWQWQDELWDLLAVPSAVWTGRGWIDENGVDYQANGLEGLRRCPRKVGIVSAGLITQSDEAAEILASLRYECVILDEAHRARRRNLGPSHRNEKADPNNLLRFLQRVAERTRSLLLATATPVQLDPIEAWDLLEALNRGNETVLGSRYSRWLTRPREGLDYVLDRASPPDDVREVWEWVRDPLPPAGEGPVFAILRRSLGMNETESWAPPEAFDRLAPPAQHQLERLGREFFRNHNPFVRHIVRRTREFLEQTIDPETSEPYLTPVRVRLFGEGEHDALLLPPILKDAYKTAEEFCQEVASRPGLNSGFLKTLLLRRVGSTIEAGRLTALRLLEGGEQADEDEEEERPSLLYPLTERERDLLERFLRLLEAAREEDPKLQAVNDLLCRGVDDTGPWRSLGCIVFSQYYDSAQWLARRLSEQLPEEEIGLYAGSGKSQLFQGGTATRVGRDVLKERVQRGELRILVGTDAASEGLNLQRLGTLINVDLPWNPTRLEQRKGRIQRIGQPRAVVFLCNLRYRGSVEDRVHQLLSARFRAIHDMFGQLPETLEDVWIAVALHEEEKARHLIDAVPRKHPFALRYHQITPVSWETCAAVLERESQLELLRQGWQ
SIO_010081: TRD_RS10480
subclass of: SO_0000673
so part of: TRD_RS10480
location: 268611..271313
location: region:268611-271313:1
so has part: feature:268611-271313:1:exon

WP_012642547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268611-271313:1:exon

TRD_RS10485
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10485
old locus tag: trd_A0282
so part of: sequence
location: complement(271733..272170)
location: region:271733-272170:-1
so has part: feature:271733-272170:-1:exon
subclass of: SO_0000010

position:271733:-1
position: 271733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272170:-1
position: 272170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271733-272170:-1:exon

TRD_RS10485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10485
old locus tag: trd_A0282
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKVSTASLRFLGRYLLILLLLLWAVGQLVWCGYLLADPPTAYLPDTPLGRLECASWLLASALATLAVANLLATAISVPWHLVSLIAVTGWLALPLRSAWGAWSAIGTFTFEPFTDPLALPIPVVSGWFAVTLLALGAGLVGRGR
SIO_010081: TRD_RS10485
subclass of: SO_0000673
so part of: TRD_RS10485
location: complement(271733..272170)
location: region:271733-272170:-1
so has part: feature:271733-272170:-1:exon

WP_012642904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271733-272170:-1:exon

TRD_RS10490
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10490
old locus tag: trd_A0283
so part of: sequence
location: complement(272173..273051)
location: region:272173-273051:-1
so has part: feature:272173-273051:-1:exon
subclass of: SO_0000010

position:272173:-1
position: 272173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273051:-1
position: 273051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272173-273051:-1:exon

TRD_RS10490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10490
old locus tag: trd_A0283
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADRLTTVFLPLLLAAVLVPLVSFTRFGPTAAVGFRSFADYGLPAIQLSDPLPNQFELFPLDLPPTPGPVVTLFLHLRVALDPASPPGTLSVWDQRAGGSALLLRVRWSPDPTGGVLEWDTVDLFAGPRRGFVLGHTLELVLANVVPDDWRRPGTFPLSLHFEREGALRVRSMLVYPDSGIEIARRGLPAFWVSVAAPRDPPPVGAPFELRVHLAPRGRTPPRQAQLELLPSPCVRSAGGASSLAWSDLTKATTVRLQLERLTAEPCSFQLVWGTESSSGSITVQLDRAEES
SIO_010081: TRD_RS10490
subclass of: SO_0000673
so part of: TRD_RS10490
location: complement(272173..273051)
location: region:272173-273051:-1
so has part: feature:272173-273051:-1:exon

WP_012643237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272173-273051:-1:exon

TRD_RS10495
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10495
old locus tag: trd_A0284
so part of: sequence
location: complement(273076..273585)
location: region:273076-273585:-1
so has part: feature:273076-273585:-1:exon
subclass of: SO_0000010

position:273076:-1
position: 273076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273585:-1
position: 273585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273076-273585:-1:exon

TRD_RS10495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10495
old locus tag: trd_A0284
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSERAGAVPSLPPRSPIPESLRKGVALGLALLGALFGAATLFYLWRSFREDYPELRFDLRVLAALLFGYGSLFAVSAWALWRGRVRLWLPLAALVGFLLPFLSFTLDRLYYAVRTGEFRPERLLDALRLYYGPPFTAIHAVLYGCLVLALFTFWVYRSQHQVPGNEDR
SIO_010081: TRD_RS10495
subclass of: SO_0000673
so part of: TRD_RS10495
location: complement(273076..273585)
location: region:273076-273585:-1
so has part: feature:273076-273585:-1:exon

WP_041437260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273076-273585:-1:exon

TRD_RS14680
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14680
so part of: sequence
location: complement(273596..274249)
location: region:273596-274249:-1
so has part: feature:273596-274249:-1:exon
subclass of: SO_0000010

position:273596:-1
position: 273596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274249:-1
position: 274249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273596-274249:-1:exon

TRD_RS14680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14680
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKKTAQTAVAILLTAALLMIFGVTALAGSTTTYTTISYSGDTWYNWDNFSTSCACSNNVDWPVTLVFRTNASVNRVKSIVGGVGGSSMYLRANDGSGWFWDSDPGRKLLIPGYINWFHHIRVYAPASTDYFYSTAWGRYVLATTHIDRNEGTSQEQFGWSETAEEYFAALFRNQGYSVTEDTFWMANNDSWPSGRWGEGNRNFYLSNGYATIVVLP
SIO_010081: TRD_RS14680
subclass of: SO_0000673
so part of: TRD_RS14680
location: complement(273596..274249)
location: region:273596-274249:-1
so has part: feature:273596-274249:-1:exon

WP_041437263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273596-274249:-1:exon

TRD_RS14895
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14895
old locus tag: trd_A0287
so part of: sequence
location: complement(274365..275192)
location: region:274365-275192:-1
so has part: feature:274365-275192:-1:exon
subclass of: SO_0000010

position:274365:-1
position: 274365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275192:-1
position: 275192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274365-275192:-1:exon

TRD_RS14895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14895
old locus tag: trd_A0287
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPPHLTRRAMLATSLTVAAGAVAFGFWQALRSRAELEQPPAPPLLLPEDQAARARAVAQQHPTVQALVGSGARPDSPVQVNPVTGPDGRIVAAGVWFPFDAPRTVRATWVHPADWEVNWSPTRFVQATYTVEEAWGILVWVDLASEQVVRLEASGPYARVAPDEDPFVLRGELRDRAIQLALDAPWLAPLLTRAEPSVMEHLPGIHDRQGDLIGAVVGLQFSEPLAVSGTFPVVVKDERADWDDAEIPEQTIEQKVSLVVVVVSFRDDRALGLWY
SIO_010081: TRD_RS14895
subclass of: SO_0000673
so part of: TRD_RS14895
location: complement(274365..275192)
location: region:274365-275192:-1
so has part: feature:274365-275192:-1:exon

WP_012642742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274365-275192:-1:exon

TRD_RS10510
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10510
old locus tag: trd_A0288
so part of: sequence
location: complement(275561..276136)
location: region:275561-276136:-1
so has part: feature:275561-276136:-1:exon
subclass of: SO_0000010

position:275561:-1
position: 275561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276136:-1
position: 276136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275561-276136:-1:exon

TRD_RS10510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10510
old locus tag: trd_A0288
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012642411.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Uma2 family endonuclease
translation: MQQTAPPVPTRHRFTVDDLERMVRSGILLEDARVELIEGELYDMNPIGWAHQACVNWLTERFATALAGRAIVQPQGPIRLSAQTLPQPDLALLHPRPDYYRHAGPTPADVLLLVEVSDTTLAYDRDVKLPLYARADIPEVWLIDLPGQRVLVFREPVGDRYRDTLTYRPGDRISPQAFPDISLAVDDLLGA
SIO_010081: TRD_RS10510
subclass of: SO_0000673
so part of: TRD_RS10510
location: complement(275561..276136)
location: region:275561-276136:-1
so has part: feature:275561-276136:-1:exon

WP_012642402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275561-276136:-1:exon

TRD_RS10515
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10515
old locus tag: trd_A0289
so part of: sequence
location: complement(276462..277037)
location: region:276462-277037:-1
so has part: feature:276462-277037:-1:exon
subclass of: SO_0000010

position:276462:-1
position: 276462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277037:-1
position: 277037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276462-277037:-1:exon

TRD_RS10515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10515
old locus tag: trd_A0289
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012642411.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Uma2 family endonuclease
translation: MQQTAPPVPTRHRFTVDDLERMVRSGILLEDARVELIEGELYDMNPIGWAHQAVVDRMTAFFVRSLDDRAIVRTQGPIRLSERTLPQPDLALLRPRPDYYRQAGPTPADVLLLVEVSDTTLAYDRDVKLPLYARADIPEVWLIDLPGQRVLVFREPVGDRYRATLTYRPGDRISPQAFPDISLAVDDLLGA
SIO_010081: TRD_RS10515
subclass of: SO_0000673
so part of: TRD_RS10515
location: complement(276462..277037)
location: region:276462-277037:-1
so has part: feature:276462-277037:-1:exon

WP_012642411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276462-277037:-1:exon

TRD_RS10520
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10520
old locus tag: trd_A0290
so part of: sequence
location: complement(277167..277631)
location: region:277167-277631:-1
so has part: feature:277167-277631:-1:exon
subclass of: SO_0000010

position:277167:-1
position: 277167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277631:-1
position: 277631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277167-277631:-1:exon

TRD_RS10520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10520
old locus tag: trd_A0290
inference: COORDINATES: protein motif:HMM:NF015587.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YhjD/YihY/BrkB family envelope integrity protein
translation: MAAPERSASFVRDRLDGIGATLGALGLALLWFTIGGIVSGIALALPAALRFGSGLLASFVLFVLLYRFLLPAPSPSWRLVSGSALATALAWEATKFAITTAVQSIGGGSAVYGLLGAVTGILVAAQLAAALTLYGAALLATMTEQRSAPVAAQA
SIO_010081: TRD_RS10520
subclass of: SO_0000673
so part of: TRD_RS10520
location: complement(277167..277631)
location: region:277167-277631:-1
so has part: feature:277167-277631:-1:exon

WP_012642511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277167-277631:-1:exon

TRD_RS10525
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10525
old locus tag: trd_A0291
so part of: sequence
location: complement(277647..278015)
location: region:277647-278015:-1
so has part: feature:277647-278015:-1:exon
subclass of: SO_0000010

position:277647:-1
position: 277647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278015:-1
position: 278015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277647-278015:-1:exon

TRD_RS10525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10525
old locus tag: trd_A0291
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGRSSLRAACRWSRQTVFWRAFQRFRSGDGALHASAIASSALLTLGPFLLLLAIVTSRLLRGTIPPDLVLQFLLSEVPHASPLEPELRGILTRQADTASGPLALVTMLLSLWSASALGAAL
SIO_010081: TRD_RS10525
subclass of: SO_0000673
so part of: TRD_RS10525
location: complement(277647..278015)
location: region:277647-278015:-1
so has part: feature:277647-278015:-1:exon

WP_012643238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277647-278015:-1:exon

TRD_RS10530
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10530
old locus tag: trd_A0292
so part of: sequence
location: complement(278117..279793)
location: region:278117-279793:-1
so has part: feature:278117-279793:-1:exon
subclass of: SO_0000010

position:278117:-1
position: 278117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279793:-1
position: 279793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278117-279793:-1:exon

TRD_RS10530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10530
old locus tag: trd_A0292
inference: COORDINATES: protein motif:HMM:NF024578.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S1C family serine protease
translation: MTRTSQQTTRARRFAALSTRLLLLLALLVTACRSLPFRNQLTPPPTAPRTSEQPLSWADVEERLRPATVLVEFARGDQPPFPVTGVAYAPGLVLTVAPPIADQPPTQVRVRAPDQNESEPAELLGLSTCDGLAVVRVASPRNLPLAPLATNKTPDIGEDVLVFGYPASDPTKPPISLPAAATGTATDPDRERDELGVNIALDDLIFGALMADRYGAVLGLALPDGRFLPAATALQIAQTLAEGRGVLWLGIQLSIHRNAERFGTATGLVVRGVNPGGPAATAGVEPGMLLARLDDTEVSSFSQVCGILRQHRQGDELTVELRQPRAAEIAILTTTIRVGEPSQRTPTVIRVEPRPAEGQRLTYRWTFDESTQNDWPLGRSDLGSGEIADGAYAVTLTRPQAFGILEPRTVPPGTDQRVRTRVTIPDETGVGLLVRSTLEPDQSRSFYTCIVVRSGGQLVALCSLILAGEPLVLLPVTPLAVSLPPDEPLELDLAVQDSTLTFRVASQTVADLEDPLLGSGTIGLWVESFDTVPVTIRFDEVEAELVPASGKTRGQITR
SIO_010081: TRD_RS10530
subclass of: SO_0000673
so part of: TRD_RS10530
location: complement(278117..279793)
location: region:278117-279793:-1
so has part: feature:278117-279793:-1:exon

WP_012643166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278117-279793:-1:exon

TRD_RS10535
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10535
old locus tag: trd_A0294
so part of: sequence
location: 280110..281801
location: region:280110-281801:1
so has part: feature:280110-281801:1:exon
subclass of: SO_0000010

position:280110:1
position: 280110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281801:1
position: 281801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280110-281801:1:exon

TRD_RS10535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10535
old locus tag: trd_A0294
inference: COORDINATES: protein motif:HMM:NF012245.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MDQSEERAGDTRHGLLERLRAFFEEGISSFSRPIVLQEDDPAVGRVTRALEVLASDLKATLRALEASVRRSAIGVARSALRIQTVTKAIDQTRQQADAVAHALREIHGGVEEVAAAAGNAAAAAQAVDEQSARGLRTSEQAEQEVVALQMHLQEAAERLQMLLADVAQITQVSEVIATIAKQTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEHAATQTREIRALTDRVAAQLAPVHKSLRRSVESAEAAATATVEVRTTLRATSELAARAAQAVDAIARTVHEQTTALERAVASLGEIVESIGTIEQQAQRIAEETFALAHVASDAYEQLAKVDTGTTFHRALAACRELAERCQRVFERAVDEGRLRLADVLELRYTEIKGPAIRSLARLFDVSRVPPEGFQPPKYSTAYDAAVDLELSEEMETILRQEPRLVFALPIDLNTYAPMHNRAFCQDWTGVPERDLAGNRVKRFFWDQRVLVRGARVGLGAAAERLPNMASREDFIRAGCDLRESPQQRSQFLVQTYARDTGEVMTVITVPLFVKGHRWGAALVGWKEDDGS
SIO_010081: TRD_RS10535
subclass of: SO_0000673
so part of: TRD_RS10535
location: 280110..281801
location: region:280110-281801:1
so has part: feature:280110-281801:1:exon

WP_012643030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280110-281801:1:exon

TRD_RS10540
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10540
old locus tag: trd_A0295
so part of: sequence
location: 281870..283291
location: region:281870-283291:1
so has part: feature:281870-283291:1:exon
subclass of: SO_0000010

position:281870:1
position: 281870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283291:1
position: 283291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281870-283291:1:exon

TRD_RS10540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10540
old locus tag: trd_A0295
inference: COORDINATES: protein motif:HMM:NF012245.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MGERVPDLRGAGGTAVADAWPGQGPAEVAGDEAIWIALERLATELARGDLVAAEQVVAELPPALRRQWAGVVAAWRDRVAELLVAASGAVAEGLRPVRAADEFSQAFRAQKEQVTQAASVARELAQAVQLVFGSVGQVSDAARGAAERADAGIQRVDEALRSLADVARSVAELQRRIEELSQAVHPITQVLGTIASIAKQTNLLALNAAIEAARAGEHGRGFAVVAEEVRRLAVSTQDAVAGIRQQVQALSEGMQRVGEAMGVVAEQVENGALVAAGGQEALASIRKSVDSIVVPLQEIASAAEEQAQAVNQLARNVQAVAEVAESVGRQAEELTVGVLEQMQRLRAMRELIAQTTLALSDAQLVQVAKADHLLWVQRLLAMLHGKEQLQPEQVADWTVCRLGRWYYGRGRERYGNSSVFRQLEAPHQRLHQTAAEAVRAWNRGDRERARELVEEVRRISAEIVSLLETLRTM
SIO_010081: TRD_RS10540
subclass of: SO_0000673
so part of: TRD_RS10540
location: 281870..283291
location: region:281870-283291:1
so has part: feature:281870-283291:1:exon

WP_012642584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281870-283291:1:exon

TRD_RS10545
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10545
old locus tag: trd_A0299
so part of: sequence
location: 283958..285409
location: region:283958-285409:1
so has part: feature:283958-285409:1:exon
subclass of: SO_0000010

position:283958:1
position: 283958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285409:1
position: 285409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283958-285409:1:exon

TRD_RS10545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10545
old locus tag: trd_A0299
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012923475.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NCS2 family permease
translation: MSGRAVGAGAAAGESWLERFFHLRELGTNVRTELLAGVTTFMVMAYIIFVNPQILSAPDVPDKLAISAVTTATALVAGVMTIAMGLATNRAYAMAPGMGLNAVVAFQLMGALGLTAAEAMGVIVAEGLVITVLVLLGIRRYVMEAIPLELKQAISVGIGLFILFIGLVNGGIVVRDEATLVRLGDLNSVPVFVTGVGLLITLFLLARNVRGALLWGILLTTVVAIIARAVTGTEAFPPGVAQLPTQWIAVPDFSRIGDFSFGFFAKLGVLSAILVVFSIMLADFFDTMGTLIGVGRQAGYLDERGELPQAQRALLVDSLGAVVGGACSASSATTYIESAAGIGVGGRSGLVSVVTGILFLLSMPFWPVVGIVPAQATAPALIVVGWMMMGVLSRAEAEAEGKPSRVQVGGIDFANIEVGLPVTMTMLMMPFTYSITDGIGAGFITWTLIKVFRGKFREVYPVLYVVSAAFVIYFLRHALGLVV
SIO_010081: TRD_RS10545
subclass of: SO_0000673
so part of: TRD_RS10545
location: 283958..285409
location: region:283958-285409:1
so has part: feature:283958-285409:1:exon

WP_012642621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283958-285409:1:exon

TRD_RS10550
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10550
old locus tag: trd_A0300
so part of: sequence
location: complement(285418..285636)
location: region:285418-285636:-1
so has part: feature:285418-285636:-1:exon
subclass of: SO_0000010

position:285418:-1
position: 285418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285636:-1
position: 285636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285418-285636:-1:exon

TRD_RS10550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10550
old locus tag: trd_A0300
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDLATVLVALGAFLLGPHWLLGAIRQADQCEAAGDPLGALAWTLAAVLGAYAVALAFLVLVIQAARHSFAA
SIO_010081: TRD_RS10550
subclass of: SO_0000673
so part of: TRD_RS10550
location: complement(285418..285636)
location: region:285418-285636:-1
so has part: feature:285418-285636:-1:exon

WP_012642429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285418-285636:-1:exon

TRD_RS14900
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14900
old locus tag: trd_A0301
so part of: sequence
location: complement(285659..285832)
location: region:285659-285832:-1
so has part: feature:285659-285832:-1:exon
subclass of: SO_0000010

position:285659:-1
position: 285659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285832:-1
position: 285832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285659-285832:-1:exon

TRD_RS14900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14900
old locus tag: trd_A0301
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRLQVLIWFLLPLFALLALITFAGWVSGAVGAILFVALAALIIVLALVLARQRAPS
SIO_010081: TRD_RS14900
subclass of: SO_0000673
so part of: TRD_RS14900
location: complement(285659..285832)
location: region:285659-285832:-1
so has part: feature:285659-285832:-1:exon

WP_012642804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285659-285832:-1:exon

TRD_RS10555
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10555
old locus tag: trd_A0302
so part of: sequence
location: complement(285971..286882)
location: region:285971-286882:-1
so has part: feature:285971-286882:-1:exon
subclass of: SO_0000010

position:285971:-1
position: 285971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286882:-1
position: 286882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285971-286882:-1:exon

TRD_RS10555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10555
old locus tag: trd_A0302
inference: COORDINATES: protein motif:HMM:TIGR01297.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation diffusion facilitator family transporter
translation: MQRSSRTRSIKRTLVTVLVLNLTVAIAKLVVGFVSGSLSILADGLNSLLDASANIVGLVGMAIAARPPDPDHPYGHRRFEALTSLVIAGAMGLLVVQILQDAWHRLQERVQPEVTPLSFAVMLVTLLVNIGVSTWERRRGRELHSSILSADAKHTAADALVSLAVIGGLVAVRAGYAIVDPLLAIGIAGVIAWGAWTIIRDAALTLSDAAVVPVEVIEHAVRGVPGVRGVHNIRTRGGDGLVWVDLHIQVDPELSVRMAHEIASEVARMVEQTIGQAADVTVHVEPALPEHLRVTRGYRVWTE
SIO_010081: TRD_RS10555
subclass of: SO_0000673
so part of: TRD_RS10555
location: complement(285971..286882)
location: region:285971-286882:-1
so has part: feature:285971-286882:-1:exon

WP_052294132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285971-286882:-1:exon

TRD_RS10565
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: menB
locus tag: TRD_RS10565
old locus tag: trd_A0304
so part of: sequence
location: 287835..288662
location: region:287835-288662:1
so has part: feature:287835-288662:1:exon
subclass of: SO_0000010

position:287835:1
position: 287835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288662:1
position: 288662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287835-288662:1:exon

TRD_RS10565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: menB
locus tag: TRD_RS10565
old locus tag: trd_A0304
EC number: 4.1.3.36
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873457.1
GO function: GO:0008935 - 1,4-dihydroxy-2-naphthoyl-CoA synthase activity [Evidence IEA]
GO process: GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1,4-dihydroxy-2-naphthoyl-CoA synthase
translation: MNQFEWVPIKQYTDILYERLAGEGIAKITINRPEVRNAFRPLTVMEMMDAFAHAREDGSIGVVLLTGAGDKAFCSGGDQRVRGHGGYVDDQGIPRLNVLDLQKQIRYLPKPVIAVVNGYAIGGGHVLHVVCDLTIAAEHAKFGQVGPRVGSFDAGYGATLLGRIVGHKKAKEIWFLCRQYTAQEALEMGLVNAVVPYEKLEETAVEWAREILEKSPMAIRFLKAAFNADTDGLAGLQQLAGDATLLYYLTEEAKEGHRAFLEKRKPDFSKFPRFP
SIO_010081: TRD_RS10565
subclass of: SO_0000673
so part of: TRD_RS10565
location: 287835..288662
location: region:287835-288662:1
so has part: feature:287835-288662:1:exon

WP_012643270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287835-288662:1:exon

TRD_RS10570
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10570
old locus tag: trd_A0305
so part of: sequence
location: 288676..289599
location: region:288676-289599:1
so has part: feature:288676-289599:1:exon
subclass of: SO_0000010

position:288676:1
position: 288676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289599:1
position: 289599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288676-289599:1:exon

TRD_RS10570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10570
old locus tag: trd_A0305
EC number: 2.5.1.74
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011956237.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0046428 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity [Evidence IEA]
GO process: GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1,4-dihydroxy-2-naphthoate polyprenyltransferase
translation: MSVPVSDPARMPGRGASWRVWWLGARPATLVAAIGPVLVGTAAGVREAGTIRWLPFLAALVTALLIQVGTNYANDLFDYLKGADRPDRVGPTRITARGLVTVAAMRRAVVLTFALATVLGLYLVWVGGWPILVIGLASIAAGILYTAGPVPLGYAGLGDVFVFVFFGLVAVGGSSYLQTGSLSGLALLAAVPVGSLITAILVVNNLRDIPTDRAAGKRTLAVRIGERATRWQYAVLVAGAYLVPVLLWLLGWAGPAVLLPSLTLPLALRLVGVVLRGAEGPSLNPVLKRTGQLQLLFAMLFALGLLG
SIO_010081: TRD_RS10570
subclass of: SO_0000673
so part of: TRD_RS10570
location: 288676..289599
location: region:288676-289599:1
so has part: feature:288676-289599:1:exon

WP_012642727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288676-289599:1:exon

TRD_RS10575
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: menC
locus tag: TRD_RS10575
old locus tag: trd_A0306
so part of: sequence
location: 289596..290681
location: region:289596-290681:1
so has part: feature:289596-290681:1:exon
subclass of: SO_0000010

position:289596:1
position: 289596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290681:1
position: 290681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289596-290681:1:exon

TRD_RS10575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: menC
locus tag: TRD_RS10575
old locus tag: trd_A0306
EC number: 4.2.1.113
inference: COORDINATES: protein motif:HMM:TIGR01927.1
GO process: GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: o-succinylbenzoate synthase
translation: MSGSRLDWRWYRLRFRAPLETAAGSLGTRRGILVSVATADGLVGLGDVAPWPGTEDRALPEAADWLAALRAVAEEGEGALRQALERVAAVTPGARAARAALETALLDVSAQRAGVPLAFWLRSSARSSVPVNALIGIADPERTVEAARAAVAAGFRALKLKVRIAASEVERVAAVRRAVGPEVQLRLDANASAAVAAALAFARAVAPLGIEYLEQPVGSLEELAALRRQSPVPLAADEVLAGPDELERALALGAADIVIAKLPLVGSVERLLDLAERCERAGIAVVVTSNLESAVGLVAALHVAAALPGNAERAHGLATAGLVEPLGREPVFQPLGGRLVLPPGPGLGLDRTMMLAGEEDG
SIO_010081: TRD_RS10575
subclass of: SO_0000673
so part of: TRD_RS10575
location: 289596..290681
location: region:289596-290681:1
so has part: feature:289596-290681:1:exon

WP_012642847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289596-290681:1:exon

TRD_RS10580
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10580
old locus tag: trd_A0307
so part of: sequence
location: 290678..291079
location: region:290678-291079:1
so has part: feature:290678-291079:1:exon
subclass of: SO_0000010

position:290678:1
position: 290678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291079:1
position: 291079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290678-291079:1:exon

TRD_RS10580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10580
old locus tag: trd_A0307
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTGERKRMVLGLWVAVLATAVGLAVSAVLVPRALATSRGLANLLAVASALLVAAGWIGGGVTSWRGARWRGALFGLAAYLVAGSAWTAGFVLLDPWQVDYGRVDIVRFALYSVLLWPFALTYTLDWFGLGGF
SIO_010081: TRD_RS10580
subclass of: SO_0000673
so part of: TRD_RS10580
location: 290678..291079
location: region:290678-291079:1
so has part: feature:290678-291079:1:exon

WP_143714775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290678-291079:1:exon

TRD_RS10585
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10585
old locus tag: trd_A0308
so part of: sequence
location: 291092..292555
location: region:291092-292555:1
so has part: feature:291092-292555:1:exon
subclass of: SO_0000010

position:291092:1
position: 291092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292555:1
position: 292555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291092-292555:1:exon

TRD_RS10585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10585
old locus tag: trd_A0308
EC number: 6.2.1.26
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012616433.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008756 - o-succinylbenzoate-CoA ligase activity [Evidence IEA]
GO process: GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: o-succinylbenzoate--CoA ligase
translation: MLVPEWLAWRAQTTPDRLALVWRDRVWSFASLAAAADEAARRLAGLGVRMGDRVAVVMANRPEFVQLVHAVSRLGAILVPLNVRLTGSELRTLLDDAEPRVVVVDRATCSLLDGWSGAVVEIDREWSSLPTTTVELRRAIDLAAVHTLVYTSGTTSRPKGVLLTYGNHWWSALGSQLNIGAVPEDRWLLCLPLFHVGGLSILFRSVIGGFAVELHERFDPASVNRAIEEGTTLLSVVGTMLWRMLEERGERPYPRHLRAVLLGGGPAPRPLLEHAAALGVPVLQTYGLTETASQLATLAPEDALRKLGSAGRPLYPNELRVVREDGSPAGPGEPGEITVRGPVVTPGYWRRPDLTARALRDGWLWTGDLGYLDEDGYLTVLDRRDDLIVTGGENVYPAEVEAVLLAHPAVAEAAVVGIPDVEWGQRVVAAVVLRPGATVRAADLASWCRERLAGYKVPRAFRFVSELPRTESGKVQRWAVRQAWNAE
SIO_010081: TRD_RS10585
subclass of: SO_0000673
so part of: TRD_RS10585
location: 291092..292555
location: region:291092-292555:1
so has part: feature:291092-292555:1:exon

WP_012642951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291092-292555:1:exon

TRD_RS15150
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS15150
pseudo: true
so part of: sequence
location: 292678..>293823
location: region:292678-293823:1
so has part: feature:292678-293823:1:exon
subclass of: SO_0000010

position:292678:1
position: 292678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293823:1
position: 293823
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292678-293823:1:exon

TRD_RS15150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS15150
inference: COORDINATES: protein motif:HMM:NF015882.2
GO function: GO:0051287 - NAD binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: malic enzyme-like NAD(P)-binding protein
SIO_010081: TRD_RS15150
subclass of: SO_0000673
so part of: TRD_RS15150
location: 292678..>293823
location: region:292678-293823:1
so has part: feature:292678-293823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292678-293823:1:exon

TRD_RS15155
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS15155
so part of: sequence
location: 293956..295191
location: region:293956-295191:1
so has part: feature:293956-295191:1:exon
subclass of: SO_0000010

position:293956:1
position: 293956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295191:1
position: 295191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293956-295191:1:exon

TRD_RS15155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS15155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013059453.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malic enzyme-like NAD(P)-binding protein
translation: MAEQALDLRRRYRGVLEIRSKLPVRDHHILNLLYLPPAALAPVEEVRQHREAVYDLTVKGNLVAIVTDGSAVLGLGDIGPQAALPVMEGKAVLFQSLGGVEAFPICIAERDPDRIVDIVAAIAPSFGGINLEDIAAPRCFEIESALKERLDMPVFHDDQHGTAIVVLAALINAFKLRGTPLAEARVVINGAGAAGIATAKLLLVYGVGDVILCDRLGAIYREREAGMNRYKMEIARLTNKAGVRGDLATALVGADAFIGLSSPNILTPEMIRSMAPDPIVFALANPDPEIHPDLALEAGALVVATGRSDFPNQVNNSLAFPGVFRGALDVRARDINDAMKLAAAQAIAELVSPRQLSPQYVIPDSLDLSVPPAVAAAVARAAVETGVARLQVDPDDIAARTRELLYEGLRR
SIO_010081: TRD_RS15155
subclass of: SO_0000673
so part of: TRD_RS15155
location: 293956..295191
location: region:293956-295191:1
so has part: feature:293956-295191:1:exon

WP_041437577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293956-295191:1:exon

TRD_RS10595
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10595
old locus tag: trd_A0310
so part of: sequence
location: complement(295268..298048)
location: region:295268-298048:-1
so has part: feature:295268-298048:-1:exon
subclass of: SO_0000010

position:295268:-1
position: 295268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298048:-1
position: 298048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295268-298048:-1:exon

TRD_RS10595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10595
old locus tag: trd_A0310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012545920.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD-IC family P-type ATPase
translation: MRDTVHWHALTVAETLERLGTSLDGLATREAERRLQQFGPNEIETAPPPSLLRIILHQFKSPLIYILLVAALVTAGLGEWIDTGAIFAVLLINAALGTYHELRAEQAIRSLMLYLSPRARVIRDGVEREIPAKSLVPGDIVLLESGIRVPADLRLVSTTALMVDESVFTGESVPVVKRPDPVPPETPIADRVCMAFLGTIVTSGRGVGVVVSTGRATELGKIAYLARAETQPQTPLERQFARFARLVALVVLVSIVAISSFGVLRGDEPALLFKFAVGAAVAIVPEGLPIVVTLVLAVSAQRMARRRAIVRHLAAVETLGSTTVIGSDKTGTLTENRMTVRALWAARRVISFEDEQLDPVPHLSFSALRETAFSDLPPALRVLVTGVLANEATLAHSEEIGQERAGIGDPTDLALLIAGARFGLVREELESIYPILAEIPFEPERRFAAVVSRIDGKPVFLAKGAPERILDMCSTWVSPEGLVPLDREAILAAAHQLAQQGLRVLGFAAGEIPFEHAERIESLLEPSGLTFLGLVGLWDPPRAGVREAIASCHSAGIRVVMITGDHAATAAAIADFLGIAPRSSPVLTGRELQRLSDEELRSIVQQVSVFARVEPEQKLRIVRALQANGETVAVTGDGVNDAPALRAAEIGVAMGKSGTDVAREAADIVLTDDNFVTIVAAVEEGRGAFDNLRKATFFLISTGAAMLFVLPFAVLAGWPLPFYPAQLLWLNLVTNGLQDVAMAFEPKEPGLMRRRPRPRREGILSPLLWERTLLSGLVMAAGTLWIFDWTLRASGSLDLARTVALTTMVIFQNFQVGNARSSIRSLFRMSPFSNRVLFAAVIAAIIVHVGALYVPLTQFVLRVEPIPLDIWPRIILVASTILAVVEVHKWLRRRWPRRDSWETSEVLGEPTRRPTMQPARQATPEA
SIO_010081: TRD_RS10595
subclass of: SO_0000673
so part of: TRD_RS10595
location: complement(295268..298048)
location: region:295268-298048:-1
so has part: feature:295268-298048:-1:exon

WP_012642471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295268-298048:-1:exon

TRD_RS13865
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13865
old locus tag: trd_A0311
so part of: sequence
location: complement(298105..299493)
location: region:298105-299493:-1
so has part: feature:298105-299493:-1:exon
subclass of: SO_0000010

position:298105:-1
position: 298105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299493:-1
position: 299493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298105-299493:-1:exon

TRD_RS13865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13865
old locus tag: trd_A0311
inference: COORDINATES: protein motif:HMM:NF012791.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MAGPVVVPVLPTYLDPERVTHCAIPFGRAIAQRLGSELVLLSIVEVTESLRSYLEAEGEQVEQLVQRWLEQRRASLERLRNAISDVSCRIEVRLGEPAKEIVAYADASQAAVIVMSSHGRLGVARLLVGSVTFSVMQRARQPALVVRARVPVPAPNASVTFSPVLVPLDGSALAEEAIDTALDLLGQGSEPLQLHLFHVLAEEEDPARWERYLEAVAQRVRARGYPTSWSLGSGPVAETIAAEAAARQAGLIAMGTHGMSGIRRVLLGSTAEHVLHATTVPLLLHRPQAVRQALEEPATANETLRARDIMTPDPVTVGPDATLEQVARLMLDRQIGAVPVVDADGRLLGLIREEDFLAQEKPIPFAAFRAPQLFGHWLNAEGIERIYAEARTMKAGDVAQAPAVTVTEDTPLSRIAQLMVERDVRHIPVVRDGKLVGIVTRHDVLKAVARQRSTSATTGHAS
SIO_010081: TRD_RS13865
subclass of: SO_0000673
so part of: TRD_RS13865
location: complement(298105..299493)
location: region:298105-299493:-1
so has part: feature:298105-299493:-1:exon

WP_012643278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298105-299493:-1:exon

TRD_RS14905
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14905
so part of: sequence
location: 299542..299709
location: region:299542-299709:1
so has part: feature:299542-299709:1:exon
subclass of: SO_0000010

position:299542:1
position: 299542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299709:1
position: 299709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299542-299709:1:exon

TRD_RS14905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14905
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIAILAVLVTLALAASAARAGRRAFTARDQRYPIEAIRIELRAGEQRGEGCSAGP
SIO_010081: TRD_RS14905
subclass of: SO_0000673
so part of: TRD_RS14905
location: 299542..299709
location: region:299542-299709:1
so has part: feature:299542-299709:1:exon

WP_169302309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299542-299709:1:exon

TRD_RS10605
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10605
old locus tag: trd_A0313
so part of: sequence
location: 299964..300488
location: region:299964-300488:1
so has part: feature:299964-300488:1:exon
subclass of: SO_0000010

position:299964:1
position: 299964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300488:1
position: 300488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299964-300488:1:exon

TRD_RS10605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10605
old locus tag: trd_A0313
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019629468.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRDPFAAELHAWFLGRLPEGWFVEPPEIAYDRDEILVVGRLAEPSLPEGASEEERQAACAARIQRFREETRAQRMRIASEAEYRFGRKVSWGAACGPIRQSFTVLSVPVMTRLRLAERQVLDTLVEAGIARSRSEALAWCVRLVGRHQADWLEELRRALVRVQELRQAGPDVD
SIO_010081: TRD_RS10605
subclass of: SO_0000673
so part of: TRD_RS10605
location: 299964..300488
location: region:299964-300488:1
so has part: feature:299964-300488:1:exon

WP_012643043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299964-300488:1:exon

TRD_RS10610
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10610
old locus tag: trd_A0315
so part of: sequence
location: 300598..301572
location: region:300598-301572:1
so has part: feature:300598-301572:1:exon
subclass of: SO_0000010

position:300598:1
position: 300598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301572:1
position: 301572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300598-301572:1:exon

TRD_RS10610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10610
old locus tag: trd_A0315
inference: COORDINATES: protein motif:HMM:NF012318.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trypsin-like peptidase domain-containing protein
translation: MPALEPETLLDAFSAAVVRVVQRVAPAVVGLRVVRSTHRGSDVPGAGSGFLITPDGYVLTNSHVVHRARQIVVSLADGREFAAQLVGEDPATDLAVVRVQANGLPIAEFGDSDRLQVGQLVIAIGNPLGLQASVVTGVVSALGRSLRGPDGRLIENVIQTDAPLNPGNSGGPLVDTRGKVVGVNTAIIAGAQGLGFAIPASTAQWVVGQLVREGRVQRAWLGIIGELKSVPGRFVPEHGGTRAAGIAVREVIVGSPAERAGLRPGDVIVSLDGAPVRSPTDLQRLLGRAPVGSTIVLGVVRQGKLATVRAELAPEPDRERQASR
SIO_010081: TRD_RS10610
subclass of: SO_0000673
so part of: TRD_RS10610
location: 300598..301572
location: region:300598-301572:1
so has part: feature:300598-301572:1:exon

WP_081433497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300598-301572:1:exon

TRD_RS10615
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10615
old locus tag: trd_A0314
so part of: sequence
location: complement(301557..302822)
location: region:301557-302822:-1
so has part: feature:301557-302822:-1:exon
subclass of: SO_0000010

position:301557:-1
position: 301557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302822:-1
position: 302822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301557-302822:-1:exon

TRD_RS10615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10615
old locus tag: trd_A0314
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873427.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MTADRPAAPSGETSRLARLHAALTASALAVPAYRRYWAGMLVSNIGSWLQLVAQGWLILALTGSPAYLGLYGLLRSIPTLTITLVGGAVADRVDRRRILLVTQSLAALLALLLGILDLTGTIRPWQILAIAFATATVMAFDNPARQAMVPGLVGNDRVASAVGLNSAAWNAAAVIGPSLAGLLVAAAGTGWAFVLNGVSYLPVLWAVWTIAPAPPERTSTTSLLVHVRVGLRAVRHDRRLLGLLTLLAVPTFLGRPYLQLMPVFARDILHTSAAGYGALMGINGVGALSGALLVGRLGARQDRGRILFLVNLVFAATLVGFALSRWLELSAILLFLIGASQTLLMALTNTLIQLIVPDEFRGRVMALYTLIPMGLMPLGTMALGGIGDLFGVPATVAVAASGALVFTLAGRRLFPEVYRLA
SIO_010081: TRD_RS10615
subclass of: SO_0000673
so part of: TRD_RS10615
location: complement(301557..302822)
location: region:301557-302822:-1
so has part: feature:301557-302822:-1:exon

WP_012642958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301557-302822:-1:exon

TRD_RS10620
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10620
old locus tag: trd_A0317
so part of: sequence
location: complement(303190..304161)
location: region:303190-304161:-1
so has part: feature:303190-304161:-1:exon
subclass of: SO_0000010

position:303190:-1
position: 303190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304161:-1
position: 304161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303190-304161:-1:exon

TRD_RS10620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10620
old locus tag: trd_A0317
EC number: 3.4.16.4
inference: COORDINATES: protein motif:HMM:NF012970.2
GO function: GO:0004185 - serine-type carboxypeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanyl-D-alanine carboxypeptidase
translation: MRGFFAFVRRFGVPFGLLALSVAIAGATLARYAAPVSLPSTTTVAPSPEPTPTPTPTPSPTPEPPSLSARSVLVVDLTTDRILLERASRTPLPPASTLKLLTALTAVEILSFEEIVTVQPEDTVDPARESAMGLDVGDTITVHDLLLGLLLPSGNDAARALARSAGERLAGPPDRPPRERFLVAMQEKARELGLSETVVLTPDGDDVPGQTTSARDLLQLARATLDHPELAALVALRTAQVRVGGPKARVLELRNTNELLGQHGVIGIKTGTTPEAGQCLVAAWRTSDGRTFVAIVLGSQDRYGDMRAIIDWVARTTGSAPVP
SIO_010081: TRD_RS10620
subclass of: SO_0000673
so part of: TRD_RS10620
location: complement(303190..304161)
location: region:303190-304161:-1
so has part: feature:303190-304161:-1:exon

WP_012643142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303190-304161:-1:exon

TRD_RS10625
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10625
old locus tag: trd_A0318
so part of: sequence
location: complement(304158..305006)
location: region:304158-305006:-1
so has part: feature:304158-305006:-1:exon
subclass of: SO_0000010

position:304158:-1
position: 304158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305006:-1
position: 305006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304158-305006:-1:exon

TRD_RS10625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10625
old locus tag: trd_A0318
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012842913.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxygenase MpaB family protein
translation: MMRESRSIVQIVNAERIVVLGWGRAILAQLAHPLVAAGVAEHSSFARDTWSAFRRFRATVNAMRALTFGSPEAARAAAARIIRTHDRVRGMLREPSGRFPAGTRYSAHDPDLLVWVHTTTVEATITAYERFVRVLTPEERDRYCREASAMEFWLGIPNGYLPRSWGEIEEKITRARREGTLAVTPLTRQLADSVLSPPHPWWLAPSVRVWRWLTIGFLPDWLRAAYGFSWSAHDDERFERYARAIRSLWSRLPALVRTWPEARSAQSLALPPDGMTSVGAPQ
SIO_010081: TRD_RS10625
subclass of: SO_0000673
so part of: TRD_RS10625
location: complement(304158..305006)
location: region:304158-305006:-1
so has part: feature:304158-305006:-1:exon

WP_012643167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304158-305006:-1:exon

TRD_RS10630
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10630
old locus tag: trd_A0319
so part of: sequence
location: complement(305003..305797)
location: region:305003-305797:-1
so has part: feature:305003-305797:-1:exon
subclass of: SO_0000010

position:305003:-1
position: 305003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305797:-1
position: 305797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305003-305797:-1:exon

TRD_RS10630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10630
old locus tag: trd_A0319
EC number: 2.1.-.-
inference: COORDINATES: protein motif:HMM:NF019846.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MASQSDVLFAQLLREFGRPVPEDPARPCLLRALRERQWLVPGASVLLLLPSPELVAAVADHGAHVTVVEPLEPLLERARRRIDVPKTPIHWIRRDPQRLPFRRAFDLVLASGLVLGTSGNQQADEEVLRQLALALRPGGTLLLDLPNRELLVRDFVERIWGEIDGLRVLVRQHWDLPEGTVQVEWHVLWPSGASERCARTLRLYAASELATLVRRSGFVALEFWGDDDATPYRLWSSRLLLVARTASEPSQPLVVGSDSESSSA
SIO_010081: TRD_RS10630
subclass of: SO_0000673
so part of: TRD_RS10630
location: complement(305003..305797)
location: region:305003-305797:-1
so has part: feature:305003-305797:-1:exon

WP_012642394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305003-305797:-1:exon

TRD_RS10635
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10635
old locus tag: trd_A0320
so part of: sequence
location: complement(305812..306966)
location: region:305812-306966:-1
so has part: feature:305812-306966:-1:exon
subclass of: SO_0000010

position:305812:-1
position: 305812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306966:-1
position: 306966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305812-306966:-1:exon

TRD_RS10635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10635
old locus tag: trd_A0320
inference: COORDINATES: protein motif:HMM:NF012318.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trypsin-like peptidase domain-containing protein
translation: MRRLSIAAGIVIAFLAGWVAGSGCLSVRLAATPTTLAARTPIATNTPSLAPIAQLSPPASASPVTLPAPAPTGDFATAIEQVAAQVIPAVVYVSVRAIVPGLFGFGQIQEGVGSGVIFDPRGYILTNDHVIAGAQEIRVVLSDGRQFTGRVLGRSPSNDIAVVKIDGENLPVAPLGDSDQLRVGQWVVAIGNALGLEGGPTVTAGVVSALDRTIGPGFGEPAIGPLIQTDAAINPGNSGGPLVDLAGRVVGINSAKIQTAEGIGFAIPINKAKEIVQQLLEARPRAYLGITSVSMTPALAAAYGLPVQRGVLIVDVAPDSPAERAGLQPGDVIVRVDDRDVTRSDELQAVLAAHQPGDQVRIVVNRQGREQTFTVTLGSAPVIQ
SIO_010081: TRD_RS10635
subclass of: SO_0000673
so part of: TRD_RS10635
location: complement(305812..306966)
location: region:305812-306966:-1
so has part: feature:305812-306966:-1:exon

WP_012643198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305812-306966:-1:exon

TRD_RS10640
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10640
old locus tag: trd_A0321
so part of: sequence
location: 307052..307639
location: region:307052-307639:1
so has part: feature:307052-307639:1:exon
subclass of: SO_0000010

position:307052:1
position: 307052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307639:1
position: 307639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307052-307639:1:exon

TRD_RS10640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10640
old locus tag: trd_A0321
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873780.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MSGVWRTMKGETTGPSDLELVARLRSRDRAALEALYDRYARRVYSLALSIVRDQQAAEDITQELFIHLWQFPHLYEPERGAFAPWLLRSARNRAIDILRRRSRDYQVGVRFDTMSALAQDDPDDLVLRAEVAAGLQRALAELDSGLREVLELAYFSGLTQREIAERLGLPLGTVKTRVRTALRRLAEALAGDRES
SIO_010081: TRD_RS10640
subclass of: SO_0000673
so part of: TRD_RS10640
location: 307052..307639
location: region:307052-307639:1
so has part: feature:307052-307639:1:exon

WP_226980755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307052-307639:1:exon

TRD_RS13870
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13870
old locus tag: trd_A0322
so part of: sequence
location: 307636..308382
location: region:307636-308382:1
so has part: feature:307636-308382:1:exon
subclass of: SO_0000010

position:307636:1
position: 307636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308382:1
position: 308382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307636-308382:1:exon

TRD_RS13870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13870
old locus tag: trd_A0322
inference: COORDINATES: protein motif:HMM:NF021604.2
GO component: GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anti-sigma factor
translation: MTGRSLTDHDVDLEAYALGLLDPEEAVVVAQHLEACALCRNELHRIEETLGWLGTAVRPVEPPPTLRNRVLVEADPGDRRRWRLAWAWGGLAAAALLLLGVLLLAVTRLERRLDEFASQQERIAAVLARADWSTVVQGEGAGFPPEVGRIYVDRGGRDGLLVLGGLERPEAGRVYQVWLLRADGSRVDAGVFLPDRAGSALLLIEAPDDWTRYRGMGITVEPGPQGSTEPTGQRIAGCNWDWSAWARS
SIO_010081: TRD_RS13870
subclass of: SO_0000673
so part of: TRD_RS13870
location: 307636..308382
location: region:307636-308382:1
so has part: feature:307636-308382:1:exon

WP_012642979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307636-308382:1:exon

TRD_RS10650
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10650
old locus tag: trd_A0323
so part of: sequence
location: complement(308618..310462)
location: region:308618-310462:-1
so has part: feature:308618-310462:-1:exon
subclass of: SO_0000010

position:308618:-1
position: 308618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310462:-1
position: 310462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308618-310462:-1:exon

TRD_RS10650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10650
old locus tag: trd_A0323
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012872375.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide ABC transporter substrate-binding protein
translation: MSDKLRWWEDPEQVALLWKRFQVVGMDRREFIRIVGAVGGTTGAALAAAACQRGPEATPTPVAAVTPPPVPTPTPPRAVGPTPTAAPAPTPAEGELAADQVFRTNLERDPQSFDFNRDLYCGGDESTFAMLGMFTPDLEVVPDIAERWEPNQDASVWTFYIRKDSYWSNGDPVTAHDYEWSWKRQLDPATAAPYAGFLYDIKNAEAFNTQKPGVTRDDVGVKALDDYTLQVTLEGPRGYFPILAAYIAAAPAHRPSVEKYGDKWTEAENIVCNGPFKLVRWEHDKIVVLEKNEKYWNAKNITLQRVERPIIPSEAVLQAYENNEIDWMWRGPLGQLERIRSDPKLSKEYHQFNLFGTWYLVPDPKFEPYNLKEVRRAMAHAIDRETIVKQVLKGLATVAYTFTPPGMPYYIEPDDKIRELTEYNPDKARQWLKGTPYEGGKNWPKGLTLTHREEGDAPKAAAAAIIQMLKEVLGMELEHIIGEPRETYERMWKHEIPLMWVRWYVDYPDPANTLFQVWYSKAPTGRRHEWSNEEFDRLTLQANGEQDPKKRYELYYKAQLIQLEEAAAIYVYNPWSYGLMKPWVTNLPRNRNGDFMPAWNIFTRDYDYYKILKH
SIO_010081: TRD_RS10650
subclass of: SO_0000673
so part of: TRD_RS10650
location: complement(308618..310462)
location: region:308618-310462:-1
so has part: feature:308618-310462:-1:exon

WP_012642485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308618-310462:-1:exon

TRD_RS10655
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10655
old locus tag: trd_A0324
so part of: sequence
location: complement(310544..311470)
location: region:310544-311470:-1
so has part: feature:310544-311470:-1:exon
subclass of: SO_0000010

position:310544:-1
position: 310544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311470:-1
position: 311470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310544-311470:-1:exon

TRD_RS10655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10655
old locus tag: trd_A0324
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011955856.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MATTGAGMTGRAERADALIWAARPHRTLWRDALSRLLANRLALFGLIMVTTFTLMAIFAPVLAPYPYDKADFSAVSRFPTWTGKYPLGTDLVGRDMLSRLIWGAQVSMLVGLGAQVIVFLIGVPIGALAGYLGGRVDAILMRFVDVMYAFPQLLFVILIMAALGRGMQNIFIAIGVTGWVTLARLTRAEFLALRERDFVIAARAAGASPWRIITRHLLPNALSPIIVTLTFGIPQAIFTEAALSFIGIGIPEPRPSWGKMAGETQQYITSYWYMPIFPTILIALLMLSFTFLGDGLRDALDPRTRKRD
SIO_010081: TRD_RS10655
subclass of: SO_0000673
so part of: TRD_RS10655
location: complement(310544..311470)
location: region:310544-311470:-1
so has part: feature:310544-311470:-1:exon

WP_012642576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310544-311470:-1:exon

TRD_RS10660
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10660
old locus tag: trd_A0325
so part of: sequence
location: complement(311498..312430)
location: region:311498-312430:-1
so has part: feature:311498-312430:-1:exon
subclass of: SO_0000010

position:311498:-1
position: 311498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312430:-1
position: 312430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311498-312430:-1:exon

TRD_RS10660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10660
old locus tag: trd_A0325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012872373.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MAQYIARRLLMVIPTLIAISLITFIIMHATPGSPMQPSAPQANPLPPAAQEALAKKYGLDKPLWQQYLHYLRNIFTLDFGFSYQYQTREVREIMATTLPVSLHLGVMAMALAILIGIPLGVIAAINQNGPVDYLCSFIATLGVAVPNFILALFLIVLLVLLIPIIPRTGGWDSPIDWVLPTLALSLGPIGIIARYTRASMVEVLRQDFIRTAYAKGLSDRQVIVRHVLKNGLIPPITILGPMFAAIGTGSPFVEKIFRVPGMGRFFVDSLIARDYPMIMAVILIYGAFLAIMNIVVDILYGVVDPRIRLA
SIO_010081: TRD_RS10660
subclass of: SO_0000673
so part of: TRD_RS10660
location: complement(311498..312430)
location: region:311498-312430:-1
so has part: feature:311498-312430:-1:exon

WP_012642675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311498-312430:-1:exon

TRD_RS10665
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10665
old locus tag: trd_A0326
so part of: sequence
location: complement(312746..313786)
location: region:312746-313786:-1
so has part: feature:312746-313786:-1:exon
subclass of: SO_0000010

position:312746:-1
position: 312746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313786:-1
position: 313786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312746-313786:-1:exon

TRD_RS10665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10665
old locus tag: trd_A0326
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012642475.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MDVISHSATHDVFDTTIIGGGPVGLFAAFYAGMRGLKTKIIDSLPELGGQLIAVYPEKYIYDVAGFPKVLAKDYVRGAVEQGLSTGAVPCLEETAQSLTWLPDHGYYRLTTDKGEHYTRTVIICAGIGSFEPKRLDAPGIRTFEGRGVTYLVRSLESFRDQDVVIVGGGDSAVDWALAVAPLARSTTLVHRSKFRAHERSVQQLHQAPVTLYYPFWEVKEVRGNTWLEHVVIHQTRTGEERTLPAQTLIVAIGFAADLGPLTAWGLTIERNSIVVDPRTMSTGLPGVFAAGDVATYPGKFKLIATGVAEAITAVNHAVVFLDPAARLDAGHSTAVMDKRERAATPH
SIO_010081: TRD_RS10665
subclass of: SO_0000673
so part of: TRD_RS10665
location: complement(312746..313786)
location: region:312746-313786:-1
so has part: feature:312746-313786:-1:exon

WP_012642964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312746-313786:-1:exon

TRD_RS10670
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10670
old locus tag: trd_A0327
so part of: sequence
location: complement(313789..314685)
location: region:313789-314685:-1
so has part: feature:313789-314685:-1:exon
subclass of: SO_0000010

position:313789:-1
position: 313789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314685:-1
position: 314685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313789-314685:-1:exon

TRD_RS10670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10670
old locus tag: trd_A0327
inference: COORDINATES: protein motif:HMM:NF013098.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VOC family protein
translation: MALWLTHVGVRVPNLQDSIEFHTSVLGLTVLSRESDRAYLSCGYDRSVDLCLVTGGTGLDHVAFGVTDERELDTLASRLLDHGAELVPSASPEPGVNKATRLRLPSGHLLEFVIIEPDPEQRFTYPHPAAPPMTHRSVVLLIDLDHVTLRHTDVSGLALFLQNSLGFHIPDARLMPDGQWRAAWLHVTSQHHDLAIIRGDAGETLDHVAFRVSGIETMKYLADRLASFGMTIEVGPGRHSIGGNLFTYFWTPDGNRYELSAEMAMVSNTASPTRFWGDDPGLFSPWGIRPPESFRKGS
SIO_010081: TRD_RS10670
subclass of: SO_0000673
so part of: TRD_RS10670
location: complement(313789..314685)
location: region:313789-314685:-1
so has part: feature:313789-314685:-1:exon

WP_012642628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313789-314685:-1:exon

TRD_RS10675
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10675
old locus tag: trd_A0328
so part of: sequence
location: complement(314715..316361)
location: region:314715-316361:-1
so has part: feature:314715-316361:-1:exon
subclass of: SO_0000010

position:314715:-1
position: 314715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316361:-1
position: 316361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314715-316361:-1:exon

TRD_RS10675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10675
old locus tag: trd_A0328
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012876594.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine pyrophosphate-binding protein
translation: MAKVYELLSRQLIGLGSDTIFGLVGSGNFFLAESLVTHGAKFVAARHEAGALAMADAWARLTQKVGICTVHMGPGFTNIITPLVEAAKARTPLLVLTADVSTGAVTSTFAIDIDALATASGAIPERLWKNSTATQDLVRAYRRARYERRPVVFVMPQDIQAAESTAAVIAPEDNAYFSVIPDRSILEKIVSLVRDSRHPLILAGRGSVLAGARAGLEKLAEAIGALLATTANAHGLFAGNPWSIGIAGGFSSPGAVELFRQADLILAFGASLTVWTRRHGRLFPESCPIVQIDLDPAALHRQYPVTLACVGDARATAEALLELLPDKPVGQWRTPSTLQFIQEHSWINTPFEDASTENTIDPRTLSLFLEQNLPPDRILVLDSGHFMAYPVMYLSVPDEKGFVFTQALQSIGFGLPNAIGAAIAYPDRLTIAATGDGGLLLSLSELETVARYRLPILIVVYNDAAYGAEVHHFAPMGWPTSTVQFPDTNIAELARALGMHAFTVRTQRDLESLREALSDRSCYPMLLDAKVNPAVRGGEWFDLAFEGH
SIO_010081: TRD_RS10675
subclass of: SO_0000673
so part of: TRD_RS10675
location: complement(314715..316361)
location: region:314715-316361:-1
so has part: feature:314715-316361:-1:exon

WP_012642774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314715-316361:-1:exon

TRD_RS10680
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10680
old locus tag: trd_A0329
so part of: sequence
location: complement(316394..317194)
location: region:316394-317194:-1
so has part: feature:316394-317194:-1:exon
subclass of: SO_0000010

position:316394:-1
position: 316394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317194:-1
position: 317194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316394-317194:-1:exon

TRD_RS10680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10680
old locus tag: trd_A0329
inference: COORDINATES: protein motif:HMM:NF012235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MNTGAPAAPKSQALVIRRLTKRYVVSVLDNFDLTVDDGEFVCLLGPNGCGKTTLLRILAGIETPDSGDVLVHGSPLHERNRLTHRIGYVFQEPRLLPWKSVRDNVMLAIKNVCRVDSSRSRSLAQDFLRLVGLSGFEDYFPNRLSGGMQQRASIARALAVQPELLLMDEPFSALDPENRRILQDELLRIWRETGVTVLFVTHSVDEAFRLASRVLVLSARPTRILLEIRPDRETDVHTTKQRVLEIFAEQVRLQQGLTTPAQAVTI
SIO_010081: TRD_RS10680
subclass of: SO_0000673
so part of: TRD_RS10680
location: complement(316394..317194)
location: region:316394-317194:-1
so has part: feature:316394-317194:-1:exon

WP_012642476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316394-317194:-1:exon

TRD_RS10685
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10685
old locus tag: trd_A0330
so part of: sequence
location: complement(317191..318807)
location: region:317191-318807:-1
so has part: feature:317191-318807:-1:exon
subclass of: SO_0000010

position:317191:-1
position: 317191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318807:-1
position: 318807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317191-318807:-1:exon

TRD_RS10685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10685
old locus tag: trd_A0330
inference: COORDINATES: protein motif:HMM:NF012711.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AMP-binding protein
translation: MNPTLLSSIVDHAAESDPARPFLQWHQAVWTAQDAQLGVLRLTHFLHALGVGPGDRIAVLSQNRPEVLLLLFAAARIGAILVPINTRYSAFEIATVLDDAQPSLLFCDTTTLSLASSARSNCVPQLISLDEPTLQSQLRQGPIHSIQAAMASPRPTDPVLMLYTSGTTGSLRGALLSHSNLLTNVHQILTTLQPVPGTSALLVTPLFHAAIVPAALTPLASGLTLIIHERYDPERALHALQHYPVSWTVLVPTMIQACIDALGTRTLPESHHQRTIYYGAAPAPRSLIIEARERLKAELAQSYGLTEATQCVTILTPQDHRRAITSSPELLLSCGKPVAHTAVRILVNSTLEDTPHRVGEVVVFGPQVMIGYWQRPTETANVFFEGWLRTGDVGYLDADGYLYITDRLKDLVISGGENVYTPRVEDVIRSHPAVREVAVIGLPHPKWGETVHAVIALNPSYQPSEQLAGDIVRHCRQFLGGFEIPRSIEFTDQLPKTATGKILKRNLRSRQITDIHFALDLRDSIGTARLHSREGGTE
SIO_010081: TRD_RS10685
subclass of: SO_0000673
so part of: TRD_RS10685
location: complement(317191..318807)
location: region:317191-318807:-1
so has part: feature:317191-318807:-1:exon

WP_012642559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317191-318807:-1:exon

TRD_RS10690
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10690
old locus tag: trd_A0331
so part of: sequence
location: complement(318824..319936)
location: region:318824-319936:-1
so has part: feature:318824-319936:-1:exon
subclass of: SO_0000010

position:318824:-1
position: 318824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319936:-1
position: 319936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318824-319936:-1:exon

TRD_RS10690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10690
old locus tag: trd_A0331
inference: COORDINATES: protein motif:HMM:NF015995.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transporter substrate-binding domain-containing protein
translation: MNRRTFVRTALLGTVSSYLLAACGGGGNPTPTPQAAAPAPSPTPMPMATPTPAPAPTATPTVAPTPTPAPPPTLRFAYLRLGWAGCEAIDELKLLKERGWNIEWSRIDQISALANAYAAGQAEIIDMSAIIAAQMHEKGVEFKIFSAAVGTLGAILVRADLNDISSVPDLRGRKVAGVPGGTTTQDINAMVRKLYNMDLFTDTQFVQASAPPDVANLIINKNVDAVLIWEPTTSRLTESGVAKILVTQQELWKQVSGSPNPQVHVVYLARPDLLEKYPKLAKDIIEAQQTVADMWKKQDEKVIQAFATVTQLPPDIVKVALSRTTPLAGLGKDLQETLLAQWRFNRESGVLLQSDIWLDPEKARKLFWTE
SIO_010081: TRD_RS10690
subclass of: SO_0000673
so part of: TRD_RS10690
location: complement(318824..319936)
location: region:318824-319936:-1
so has part: feature:318824-319936:-1:exon

WP_012643114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318824-319936:-1:exon

TRD_RS10695
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10695
old locus tag: trd_A0332
so part of: sequence
location: complement(320064..320873)
location: region:320064-320873:-1
so has part: feature:320064-320873:-1:exon
subclass of: SO_0000010

position:320064:-1
position: 320064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320873:-1
position: 320873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320064-320873:-1:exon

TRD_RS10695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10695
old locus tag: trd_A0332
inference: COORDINATES: protein motif:HMM:NF012738.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MVIGSSTRRLVGKQAESSLTGFGLLRRFAPTILVLLLFVVLWLVVASRTSPYVLPSPVSVFRQLVTLFVDGTVWTHVGATLYRVTAGFLLGTVLALLLGLVASSSPVLRLVLRDLSSILNATSVFVWIVLALIWFGLTDRAPIFTTLMITIPVLMSNVFEAIDSLDRRLLEMASVYRFTALDRFVHITFPSVIPYLFAGMRVAFALGLRVSVVAEIFGVSTGVGYMMNFARDTLRTDAVFAWALILITMMLLVDNIIFSPLLRWLTRWR
SIO_010081: TRD_RS10695
subclass of: SO_0000673
so part of: TRD_RS10695
location: complement(320064..320873)
location: region:320064-320873:-1
so has part: feature:320064-320873:-1:exon

WP_012643287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320064-320873:-1:exon

TRD_RS10700
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10700
old locus tag: trd_A0333
so part of: sequence
location: complement(320883..321656)
location: region:320883-321656:-1
so has part: feature:320883-321656:-1:exon
subclass of: SO_0000010

position:320883:-1
position: 320883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321656:-1
position: 321656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320883-321656:-1:exon

TRD_RS10700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10700
old locus tag: trd_A0333
inference: COORDINATES: protein motif:HMM:NF012596.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: enoyl-CoA hydratase/isomerase family protein
translation: MSDLLVTLQTLDDTAIVTLNRPEKLNALNLELVSALRDTLLAVANDARLRLVIIRGAGRSFCSGLDLDMMAAEGMPPEFYPVQEEAFRLIETMNKLVVAAIHGYCLGGGVQLAIACDLRIASDDTVLALPAINEGLFPGMAPYRLPRLIGLGLARRYIYTGDPIPLDLAHQIGLIDWIIPARSFEDELEKLLQKLRAVPFTAAIHGKQLMANAFDQSFSAAYHDSLWRLEQCLSSDDVARARALWMERKQSRTAQRP
SIO_010081: TRD_RS10700
subclass of: SO_0000673
so part of: TRD_RS10700
location: complement(320883..321656)
location: region:320883-321656:-1
so has part: feature:320883-321656:-1:exon

WP_012642716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320883-321656:-1:exon

TRD_RS13875
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13875
old locus tag: trd_A0334
so part of: sequence
location: complement(321677..322393)
location: region:321677-322393:-1
so has part: feature:321677-322393:-1:exon
subclass of: SO_0000010

position:321677:-1
position: 321677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322393:-1
position: 322393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321677-322393:-1:exon

TRD_RS13875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13875
old locus tag: trd_A0334
inference: COORDINATES: protein motif:HMM:NF012596.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: enoyl-CoA hydratase/isomerase family protein
translation: MNNHFPYQKIRIQQENNVTVLTLADPDTHNALSNELLGELCDALSRVSSTVLLLNAEGDHFSIGRPPQSYSAAPETWMKGYYLVMRANELLMGFPGVTIAAVQGHARGAGCSLAGRCDLVLAAETATFSFPELRAGVPPVIVASYYSRKLPWHAFLRLALTGQEVSAAEACRLALVTEVVPDHELFQRARELADDLAKIDAGALATLKHFLLSSESASTPQANRLAYAALLETLASRV
SIO_010081: TRD_RS13875
subclass of: SO_0000673
so part of: TRD_RS13875
location: complement(321677..322393)
location: region:321677-322393:-1
so has part: feature:321677-322393:-1:exon

WP_012642811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321677-322393:-1:exon

TRD_RS10710
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10710
old locus tag: trd_A0335
so part of: sequence
location: complement(322390..323571)
location: region:322390-323571:-1
so has part: feature:322390-323571:-1:exon
subclass of: SO_0000010

position:322390:-1
position: 322390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323571:-1
position: 323571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322390-323571:-1:exon

TRD_RS10710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10710
old locus tag: trd_A0335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945918.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase family protein
translation: MRLALINIGCLFTGDINNPLLPDCDTVIVEDGTITQIGKFSDLAAEVEQASTVVDVNGMTVAPGLIDSHCHVVLGDYTPRQKCVDFLDSYVHGGVTAVVSASEVHAPGRPHDRHAVMGLAIAAHHCFKHFRPNGMKVFAGSIILEPFLTEEDLHYVAAAGVRYAKFGFGAYDDPREGEPQVRWAKAAGLVVMSHCGGASIPGSQPILAEHLVVLQPHVLGHINGGPTSLPDEDIELLVTQTDMALQLVQAGNLRSALRIVELAHQTGNLHRVLVATDTPTGTGVMPLGMVKSIAELSSLSSTPPEIVWSWATGNNADAFRLPTGKIAAGWPADLVVIDAPWGSVATDAAGALRRGDIPGIAAVIIDGAIRTRRSRNTPPSRREVLVKERGSNP
SIO_010081: TRD_RS10710
subclass of: SO_0000673
so part of: TRD_RS10710
location: complement(322390..323571)
location: region:322390-323571:-1
so has part: feature:322390-323571:-1:exon

WP_012642923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322390-323571:-1:exon

TRD_RS10715
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10715
old locus tag: trd_A0336
so part of: sequence
location: complement(323584..324174)
location: region:323584-324174:-1
so has part: feature:323584-324174:-1:exon
subclass of: SO_0000010

position:323584:-1
position: 323584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324174:-1
position: 324174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323584-324174:-1:exon

TRD_RS10715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10715
old locus tag: trd_A0336
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010204512.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid synthesis family protein
translation: MSANHLPIRKLYTLVDETHTVLGERDPDGYLRKVVCCAVIKNPYAGQPLAHDLSLLVTPSEELGTLLGRLAAEALGQPVESYGKAAIVGLAGEQEHAVACITSTFGNAFRTAIGGGKAWIPSNTKLGAPGTSIDIPLAFKDELWVRSHYDTVEVRIPDAPLPDEIVVAVAVANRGRLFHRLGGLSKAEALQRTTEK
SIO_010081: TRD_RS10715
subclass of: SO_0000673
so part of: TRD_RS10715
location: complement(323584..324174)
location: region:323584-324174:-1
so has part: feature:323584-324174:-1:exon

WP_012643036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323584-324174:-1:exon

TRD_RS10720
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10720
old locus tag: trd_A0337
so part of: sequence
location: complement(324171..326534)
location: region:324171-326534:-1
so has part: feature:324171-326534:-1:exon
subclass of: SO_0000010

position:324171:-1
position: 324171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326534:-1
position: 326534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324171-326534:-1:exon

TRD_RS10720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10720
old locus tag: trd_A0337
inference: COORDINATES: protein motif:HMM:NF014758.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: xanthine dehydrogenase family protein molybdopterin-binding subunit
translation: MIGQSVKRVEDFRFLTGQACYTRDVQIPGTAPLQALFLRSPYPAARITRILTEQAARVPGVVAVLTAAALPGHLRPIPLIRKPPTSHHALPVIPLLADQVVRYQGEPIACVVATTEAVAQDALELIQVEYEPLPAVGQIDAAIGSDAPLVHPDLETNIAFSATLRNGPVDDAFGKAAVVVRQRMHNNRVVPHPLEPRSVLASYDRETRQLTVWFSTQRPHHTRWFLSQILDYPENLIRVIMPDVGGAFGCKEPIYPDEVLVCLASMLLQRPVRWTESRSEHFLSTTHGRDQLADLELAADADGRLLGLRGTVWLNIGAYLYPNTSGVVLARTLPLLPGAYDIPAFDVTAHGVFTNTVPTGPYRGAGRPEAIYFIERLIDILASKLNIDPAEIRRRNFLELSPEKPTRTITGLSYDSGNFRQILDTALELSSYREHRLRQRNGDSEERLIGIGIAAYVELGGATPSTAAALEGSPPLWESATVTADPTGSIVVRVGTAGHGQGHETTFAQIAASVLGIPLSSIRVEFGDTATAPFGFGTFGTRSMTVGGSAVYLACQQLLQHAIKLAAEMLEANSSDVVYDRGYFYVRGLEDRSVSFQEVCHAAYFSLVPFRAGLQPGLQVTATYDPPNYTFATGVHVAVVAIDRHTGQLDVLSYVGVDDCGRAINPMIVEGQLHGGIAQGIGQALFEHARYSRDGILMNPSLLDYALPRSTHLPTFETHLIEFPSLSNPLGVKGIGEGGAIVGPVAITNAVHDALRCFGITHLNMPHTPEQLWRVIGRGEAGERREE
SIO_010081: TRD_RS10720
subclass of: SO_0000673
so part of: TRD_RS10720
location: complement(324171..326534)
location: region:324171-326534:-1
so has part: feature:324171-326534:-1:exon

WP_012643235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324171-326534:-1:exon

TRD_RS10725
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10725
old locus tag: trd_A0338
so part of: sequence
location: complement(326531..327397)
location: region:326531-327397:-1
so has part: feature:326531-327397:-1:exon
subclass of: SO_0000010

position:326531:-1
position: 326531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327397:-1
position: 327397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326531-327397:-1:exon

TRD_RS10725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10725
old locus tag: trd_A0338
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005253630.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MTVPTDPNCFLKALDGQVALIVGATSGIGRAVVDAFLRCGAHVVAFGRSEEKLRELVASSQSFARALATYAGDATDHHDLDRAATLAVDRFGKLDTLVCTVGAFDYYRTILDYDTETLSSAFEELFRINVLSYILAVRASLPYLLRQPSSIVLTLSTASFYPEGGGVLYGASKFATRGLVTHLAYELAPRVRVNGVAPGGTIGTNLRGLASLREQDKRVDDATGDRAQRIQRSVPLQVAATPDDHTAAFVYLASHRLSRVVTGTIINSDGGRGVAGTVRVAHLVEEIS
SIO_010081: TRD_RS10725
subclass of: SO_0000673
so part of: TRD_RS10725
location: complement(326531..327397)
location: region:326531-327397:-1
so has part: feature:326531-327397:-1:exon

WP_012642441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326531-327397:-1:exon

TRD_RS10730
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10730
old locus tag: trd_A0339
so part of: sequence
location: complement(327394..327651)
location: region:327394-327651:-1
so has part: feature:327394-327651:-1:exon
subclass of: SO_0000010

position:327394:-1
position: 327394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327651:-1
position: 327651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327394-327651:-1:exon

TRD_RS10730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10730
old locus tag: trd_A0339
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013076819.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHEIHDSHDRITHGVEVASETIVIKNEFAEAHVRKVRTRNGERLEIHSPKLGYTIRLDPLELEAISWQPVDTFSRMLENPWGPA
SIO_010081: TRD_RS10730
subclass of: SO_0000673
so part of: TRD_RS10730
location: complement(327394..327651)
location: region:327394-327651:-1
so has part: feature:327394-327651:-1:exon

WP_012643116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327394-327651:-1:exon

TRD_RS10735
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10735
old locus tag: trd_A0340
so part of: sequence
location: complement(327674..328228)
location: region:327674-328228:-1
so has part: feature:327674-328228:-1:exon
subclass of: SO_0000010

position:327674:-1
position: 327674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328228:-1
position: 328228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327674-328228:-1:exon

TRD_RS10735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10735
old locus tag: trd_A0340
EC number: 1.14.12.19
inference: COORDINATES: protein motif:HMM:NF007479.0
GO process: GO:0019380 - 3-phenylpropionate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-phenylpropionate/cinnamic acid dioxygenase subunit beta
translation: MLLQDIPLPAIDLDYIKLYHELYQFLSYEALLLSERKYDDWLALFTDDAVYEVPIRVTRERGAAWELSPTGRLFDDTKETLAVRIARLNTEYAWAEDPPSRVRYYLSNLLITSRSNDLPENQQEVTARYNVLVIRTRGELPDIEFVSTHRQDRLRHTQDGWRIAHRTIIIDHSVLQVRNLSFFL
SIO_010081: TRD_RS10735
subclass of: SO_0000673
so part of: TRD_RS10735
location: complement(327674..328228)
location: region:327674-328228:-1
so has part: feature:327674-328228:-1:exon

WP_012642504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327674-328228:-1:exon

TRD_RS10740
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10740
old locus tag: trd_A0341
so part of: sequence
location: complement(328265..329632)
location: region:328265-329632:-1
so has part: feature:328265-329632:-1:exon
subclass of: SO_0000010

position:328265:-1
position: 328265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329632:-1
position: 329632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328265-329632:-1:exon

TRD_RS10740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10740
old locus tag: trd_A0341
inference: COORDINATES: protein motif:HMM:NF013044.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aromatic ring-hydroxylating dioxygenase subunit alpha
translation: MTTIPEYLVKMRETLPKGRIPAKIFNDPQVYQLEKERLFSRAWVFLAHESEIPQPGDYVLRWIADLSVIVVRDEHGQIRAFRNACTHRGNQVCKAEMGNASHFRCSYHGWTFKNTGELVGVPYHREVYRGQLDKNEWGLHPVRIDTYAGLIFGTLDPNADSLETYLGGFQFYLDFFLRPGPEGTEVYAPPERWVADTDWKICAENFGGDGYHTPVAHQFGFALGFYPSTGRTHFMGFAAHIPGRGHCIGIGHTPGLPPFPGFPPEVVEGYQQALTPEQISVFRDARMAVATVFPNLSFLIQPFSLTPGKPGLKFCTMRLWHPRGPGRIEMWTWCLVPKHISPELKREIYRVYSLAFGAAGTFEQDDFENWTNLSRQNAAFNADTFELAYLQGLDWEPLSDFPGPGYAFTPYVTEIGFRNLWGTWLNYLLTPPGERVDPTKVPPAFYPTKHASAAE
SIO_010081: TRD_RS10740
subclass of: SO_0000673
so part of: TRD_RS10740
location: complement(328265..329632)
location: region:328265-329632:-1
so has part: feature:328265-329632:-1:exon

WP_012642890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328265-329632:-1:exon

TRD_RS10745
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10745
old locus tag: trd_A0342
so part of: sequence
location: complement(329666..330694)
location: region:329666-330694:-1
so has part: feature:329666-330694:-1:exon
subclass of: SO_0000010

position:329666:-1
position: 329666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330694:-1
position: 330694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329666-330694:-1:exon

TRD_RS10745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10745
old locus tag: trd_A0342
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010204520.1
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrodipicolinate synthase family protein
translation: MAFPRIGASDLRGIMAYPPTPAKPNAGDIDARDTVDLDETERMIKQLLQDGVDSIATNGTLGEMATLTLEEWKAFASVVVETVRAHDPDFPLFIGATTLNTRDTIDRMRFLRDIGAPGVLLGRPMWSEMTAKTMIRFYQDVAEAVPDLAICVYDNTAAFRGIIPTEVYEALSRIPQVVAVKYAGGAAIGFRYHNDLQAVGDRIKLFPIECIWFFAYSLYGERVPGCWSTTATCGPEPVLYLRDVLLANDLTEGRWIAERILWAHEPFIVSRDFPEFARYNIQLERLRYEAAGYIKPGPSRPPYYMDLLPEQHVESTLEHVRRWQQVRQEVAERLKARAATTA
SIO_010081: TRD_RS10745
subclass of: SO_0000673
so part of: TRD_RS10745
location: complement(329666..330694)
location: region:329666-330694:-1
so has part: feature:329666-330694:-1:exon

WP_012642744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329666-330694:-1:exon

TRD_RS10750
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10750
old locus tag: trd_A0343
so part of: sequence
location: complement(330806..331549)
location: region:330806-331549:-1
so has part: feature:330806-331549:-1:exon
subclass of: SO_0000010

position:330806:-1
position: 330806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331549:-1
position: 331549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330806-331549:-1:exon

TRD_RS10750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10750
old locus tag: trd_A0343
inference: COORDINATES: protein motif:HMM:NF019349.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MQNLPRVNRIIAPTRSMATAILQEAIAKRQLRPGMRITERALASQLGISRATLREALRELETVGLLQRDSRGHLTVPEFDTNRARAIYELREVLEGLAASLFALRATDDELQRLKDELECLRAAAYAGNVTQYLLCKNRYYAIIIEGARNPVLADFLNSLQWHFRFLRSTSLQAPGRLLRSFNEIEDLTRALCERNPVLAENLARLHIRNAFAALLQRLSHLDTSHNPETDSSMSSTELLEITFGIQ
SIO_010081: TRD_RS10750
subclass of: SO_0000673
so part of: TRD_RS10750
location: complement(330806..331549)
location: region:330806-331549:-1
so has part: feature:330806-331549:-1:exon

WP_012643152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330806-331549:-1:exon

TRD_RS10755
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10755
old locus tag: trd_A0344
so part of: sequence
location: complement(332058..333080)
location: region:332058-333080:-1
so has part: feature:332058-333080:-1:exon
subclass of: SO_0000010

position:332058:-1
position: 332058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333080:-1
position: 333080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332058-333080:-1:exon

TRD_RS10755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10755
old locus tag: trd_A0344
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012642964.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MAVHDVFDTTIIGGGPVGLFAAFYAGMRGLKTKIIDSLPELGGQLIAVYPEKYIYDVAGFPKVLAKDYVRGAVEQGLSTGAVPCLEETAQSLTWLPDHGYYRLTTDKATHYTRTVIICAGIGSFEPKRLDAPGIRTFEGRGVTYLVRSLESFRDQDVVVVGGGDSAVDWALALAPLARSTTLVHRSKFRAHERSVQQLHQAPVTLYYPFWEVKEVRGNTWLEHVVIHQTRTGEERTLPAQALIVAIGFAADLGPLTAWGLTIERNSIVVDPRTMSTGLPGVFAAGDVATYPGKFKLIATGVAEAITAVNHAVVFLDPAARLDAGHSTAVMDKRERAATPH
SIO_010081: TRD_RS10755
subclass of: SO_0000673
so part of: TRD_RS10755
location: complement(332058..333080)
location: region:332058-333080:-1
so has part: feature:332058-333080:-1:exon

WP_012642475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332058-333080:-1:exon

TRD_RS10760
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10760
old locus tag: trd_A0345
so part of: sequence
location: 333259..334704
location: region:333259-334704:1
so has part: feature:333259-334704:1:exon
subclass of: SO_0000010

position:333259:1
position: 333259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334704:1
position: 334704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333259-334704:1:exon

TRD_RS10760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10760
old locus tag: trd_A0345
EC number: 3.6.3.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008476357.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Trk family potassium uptake protein
translation: MDRVRHPSRPQEQVRRPGDRVVRRAVAPREAVRLPKPRQPRRPRPIAFRLVLGFAGLILTGTLLLSLPFAAADGQRAGVIDALFTATSAVCVTGLVVRDTATNWSGFGQAVILLLIQLGGFGFATSATLLLALLGVRPTLRDRLACGMSLGEAGPGGVVRLLRRLAGLTLAIEVAGAIALLPAALAATGSLGSGLWWAVFHSVSAFNNAGFDVVGGFRSLTPYQREPLVLVPVAILVILGGLSFAVISDVVRERRWGRLTLDSKLVLVTTASLLITGTLLFLAFEWSNPRTLGPLPWPDKVLNAFFHAVVPRTAGFNSLDVAHLNDESLFVTIGLMFVGGASGSFAGGIKVQSFAVLLLAVWAVLRGRPHVAAFGREVASEFVFRAMAIALLAVALVFLASFVISLIEPFGLLAIWFETTSAFGTVGLSTGITPQLHDASKVVLVATMFAGRLGPLTLALALAERARPEPIRYARTAIALG
SIO_010081: TRD_RS10760
subclass of: SO_0000673
so part of: TRD_RS10760
location: 333259..334704
location: region:333259-334704:1
so has part: feature:333259-334704:1:exon

WP_012642839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333259-334704:1:exon

TRD_RS10765
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10765
old locus tag: trd_A0346
so part of: sequence
location: 334887..336293
location: region:334887-336293:1
so has part: feature:334887-336293:1:exon
subclass of: SO_0000010

position:334887:1
position: 334887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336293:1
position: 336293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334887-336293:1:exon

TRD_RS10765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10765
old locus tag: trd_A0346
inference: COORDINATES: protein motif:HMM:NF014443.2
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: potassium transporter TrkG
translation: MRRPGDRIVRREPLPSEVIRLRLVPRRRITLPLLVVLWLILGGAVMIGMLLLRWPATWQHAEGPSWWEAFFTALSATCTAGFAPLDVATTWNRWGQLVILLLVEAGGLAYVAIAVLLLSGIVRRTTVYEAHHVLGMRLGEEQLGELWPLVRRLLVATLLVQFGGMLLLLPASWREHQDGASALWWAMATAVTAFHNAGFDFEPGYRGLAAYQRDWGVVLPVAMLVLIGSIGFPTLSDLVTRRSWRRLYPDTRLVLVTTALLLSIGTLGIWFLERSNAATLAGVPWYQQLLDAFSVAVSRTGGPRVIDTRMLGEETSFLLGGLTFIGGASGSVAGGVKVQTFSLLLLAILATIRGSQRVVAFSREVPDRQVFRALSIAVFALSVTFAGTVWLAFLVPYTLPVIWLLVVQAFSLAGAESELLAALGTPGQLVLAFLIVLGRFGPLGLALIFATQVPRETVHYARETVRLG
SIO_010081: TRD_RS10765
subclass of: SO_0000673
so part of: TRD_RS10765
location: 334887..336293
location: region:334887-336293:1
so has part: feature:334887-336293:1:exon

WP_012643200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334887-336293:1:exon

TRD_RS10770
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10770
old locus tag: trd_A0347
so part of: sequence
location: 336303..336953
location: region:336303-336953:1
so has part: feature:336303-336953:1:exon
subclass of: SO_0000010

position:336303:1
position: 336303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336953:1
position: 336953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336303-336953:1:exon

TRD_RS10770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10770
old locus tag: trd_A0347
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873424.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrkA family potassium uptake protein
translation: MRKQFMVLGVGRFGSAVAIELERLGHEVLAIDRSERAIEAVADYVTHAVTADVTDLEVLRTLGAQDFDAAVVAIGADERSSIMATVLLKKLGVRFVLAKAQNQLHGDILTMVGADRVVYPERETGIRVAHSLTMPLAKDYFDVGPGYGLAKVVVDQRMAGKTLAELDLRERFGVTPLFLRRGDRVIMNPHREERLQVGDELTIAGRDEQLQQVLLL
SIO_010081: TRD_RS10770
subclass of: SO_0000673
so part of: TRD_RS10770
location: 336303..336953
location: region:336303-336953:1
so has part: feature:336303-336953:1:exon

WP_041437272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336303-336953:1:exon

TRD_RS10775
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10775
old locus tag: trd_A0348
so part of: sequence
location: 337006..337785
location: region:337006-337785:1
so has part: feature:337006-337785:1:exon
subclass of: SO_0000010

position:337006:1
position: 337006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337785:1
position: 337785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337006-337785:1:exon

TRD_RS10775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10775
old locus tag: trd_A0348
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873425.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarylacetoacetate hydrolase family protein
translation: MKLARILVDGTPTAVVVEDGVAYEAHGDWFVGEPRRGRELGLFEAFTVLPPVERPSKIVAVGLNYAAHVTENDPSRKIPDEPVLFLKPPSALLGHGGTILLPPGNRIDYEAELCLVIGRREQRVPEPSALDYVLGYTCGNDVSHRDLQYKDGQWVRGKGFDTFCPLGPWIETELDPSDLAIVSRLNGEPRQNSRTSQMLFPPAFLVSFISQVMTLEPGDVIMTGTPYGVGPMVPGDVIEVEIEGIGVLRNLVGAREDRR
SIO_010081: TRD_RS10775
subclass of: SO_0000673
so part of: TRD_RS10775
location: 337006..337785
location: region:337006-337785:1
so has part: feature:337006-337785:1:exon

WP_012642805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337006-337785:1:exon

TRD_RS10780
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10780
old locus tag: trd_A0349
so part of: sequence
location: 337796..338428
location: region:337796-338428:1
so has part: feature:337796-338428:1:exon
subclass of: SO_0000010

position:337796:1
position: 337796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338428:1
position: 338428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337796-338428:1:exon

TRD_RS10780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10780
old locus tag: trd_A0349
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873426.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MAESPDWLRFFSLIGRLKTLRRQGWIDRGVHEPESVADHSFRLALMAWVLAQVRPDLNAERAAVIALVHDVAEAIAGDWTPFDAALRAGADRQRLFRQRPRYDPEAEAQKAAAERAALQELAELLPASVGQRLLQTWEEYETGHSAEGRFVRQLDKIETVWQALEYRARQPELIVDSFVLGALEEVTDPALRDLLVAALAAAGWSVSEGA
SIO_010081: TRD_RS10780
subclass of: SO_0000673
so part of: TRD_RS10780
location: 337796..338428
location: region:337796-338428:1
so has part: feature:337796-338428:1:exon

WP_012642664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337796-338428:1:exon

TRD_RS10785
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10785
old locus tag: trd_A0350
so part of: sequence
location: 338473..339810
location: region:338473-339810:1
so has part: feature:338473-339810:1:exon
subclass of: SO_0000010

position:338473:1
position: 338473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339810:1
position: 339810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338473-339810:1:exon

TRD_RS10785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10785
old locus tag: trd_A0350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hemolysin family protein
translation: MPLLGEFVIILALLALNGYLAAAEIAVVSVRRAHLHALAEEGDAAARLVLRLLEQPSRLLATIQVGVTLATFFTSAVGAVSLAEPLGTALARLPIGRDQAAAMALVMVTVSLSFTSIVLGELVPKTLAVQHAERLALLSARPLAWLARIAAPIVWLLSGATNVVLRVLGVRHPGRVPSVTREELLTLLDVAASEGAVSREEARLVEDAFEFGEITVRTVMIPRVDMVTVPADAPLEQAVEQFFRTGLSRLPVVGESPDDVRGILYVKDVFRIVWQQPEARTQPCHRFARPAVYVPEHTPARQALRLLRMRRTKIAIVVDEFGGVAGLVTLEDLLERIVGEIADEFDPDYEPLREIAPGVLEVDGRVSLDELLDRLELDEEELGAEFEAESVGGVITECLGRFPEVGDVVKLGSLELEVRSMEGRRVRLVRVTYRPESREETGLEN
SIO_010081: TRD_RS10785
subclass of: SO_0000673
so part of: TRD_RS10785
location: 338473..339810
location: region:338473-339810:1
so has part: feature:338473-339810:1:exon

WP_012642558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338473-339810:1:exon

TRD_RS10790
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10790
old locus tag: trd_A0351
so part of: sequence
location: 340260..340754
location: region:340260-340754:1
so has part: feature:340260-340754:1:exon
subclass of: SO_0000010

position:340260:1
position: 340260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340754:1
position: 340754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340260-340754:1:exon

TRD_RS10790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10790
old locus tag: trd_A0351
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: nuclear transport factor 2 family protein
translation: MQQPGRTIVGVALALLVLVVATTVLVLLVERRGPPQYPPDSPEAAVMTYIEALRRNDPEQVLASLSSGARRVLEQRERIEPYYDFKAELRGASENLRTARVRIDGVEIRGERAVVTLSIERTSAGLEPGFPFPIVDGGSYSYQRTLVLVREDGTWKIDELTFYL
SIO_010081: TRD_RS10790
subclass of: SO_0000673
so part of: TRD_RS10790
location: 340260..340754
location: region:340260-340754:1
so has part: feature:340260-340754:1:exon

WP_012642396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340260-340754:1:exon

TRD_RS10795
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10795
old locus tag: trd_A0353
so part of: sequence
location: 340795..342429
location: region:340795-342429:1
so has part: feature:340795-342429:1:exon
subclass of: SO_0000010

position:340795:1
position: 340795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342429:1
position: 342429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340795-342429:1:exon

TRD_RS10795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10795
old locus tag: trd_A0353
inference: COORDINATES: protein motif:HMM:NF039189.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5671 domain-containing protein
translation: MAIARRLYLYGIAAIALAVWAVGAVRLLRELGMALWELLGRPAVTGDPEAFRARLSLSVALLLVGFPIWAVHWWLVERAVRMDAAEQRSAVRAAFLAAVLAATFGFWLASVVELVRLALLWLFGVSEPGVMSVPRVLDELAVLAVAGTLWLGHARLARKEQRDPQRRELADWLPRLYGYGAAATGLVVLVVATANLLRIGLDAVLLPDAVTGTLRFALASAIGLLVGGILAWSVHWAEALSLVSASSPVAERELRSLVRWTYLGFIVFVSFLAVLVACAAVLDDVLAWMLGIPDGESRQRVRQLLDPVTWLLPAAFSWFYHRRVMQQEAAVLAGHPSAGPDWARGVSRFLVYLSAFASLALAVLGLGGLVGLLLQALIAAVTTVPLGTWRPDLAFQLPPAVVGGVAWLVLWRDVLERSLREPESERTSLSRRVYLYGALGSSVLVILGTAGFVLYQLISAVLGIREAATALSEAAPAFGFTLVALGVLVYHGAVLRADTRAAAPRPASMAVRLILRLPPESDVDAVIRELADHVPPGATLERAN
SIO_010081: TRD_RS10795
subclass of: SO_0000673
so part of: TRD_RS10795
location: 340795..342429
location: region:340795-342429:1
so has part: feature:340795-342429:1:exon

WP_012643087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340795-342429:1:exon

TRD_RS10800
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10800
old locus tag: trd_A0352
so part of: sequence
location: complement(342390..342971)
location: region:342390-342971:-1
so has part: feature:342390-342971:-1:exon
subclass of: SO_0000010

position:342390:-1
position: 342390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342971:-1
position: 342971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342390-342971:-1:exon

TRD_RS10800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10800
old locus tag: trd_A0352
inference: COORDINATES: protein motif:HMM:NF014041.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inosine/xanthosine triphosphatase
translation: MHTPSPSIRLALGSKQPAKRAAVQEIAPLFWSRWELHCLSVPSGVRAQPLSDEETVAGALARARVVRDSADADYGIGLESGVAAGPLGRLYAVSWAVVVDRDGCVGIGGAERFALPPAVAERVLHGEELASALRALGMTSMPSEGGTVALLTGGRRQRRELFAIALLHALCDLERQRGRPLQFARSSVAPGGT
SIO_010081: TRD_RS10800
subclass of: SO_0000673
so part of: TRD_RS10800
location: complement(342390..342971)
location: region:342390-342971:-1
so has part: feature:342390-342971:-1:exon

WP_012643232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342390-342971:-1:exon

TRD_RS13880
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13880
old locus tag: trd_A0354
so part of: sequence
location: complement(342975..344048)
location: region:342975-344048:-1
so has part: feature:342975-344048:-1:exon
subclass of: SO_0000010

position:342975:-1
position: 342975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344048:-1
position: 344048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342975-344048:-1:exon

TRD_RS13880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13880
old locus tag: trd_A0354
inference: COORDINATES: protein motif:HMM:NF024091.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSWQRVLAISLRIIRQIRRDRRSLALIFLAPLVILALLGYVYRGSARTPSIALSPPDTPGGEAIARELATFPVRVEPMAPDEAIARVRAGRIAGAVFLESSAQGPTARLVLDGSQPGQARQVSAIVSQALVQAALRATGGGSSQLHLRIDYVTGSPVFDELDTFAPVFIGFFAFFFVFLLTSVSFLRERLHGSIERLIVSPLDRAEIVLGYMLGFAFYALIQSILTVLFTVYVLRVHTVGALWLVIVLTVLLTLGAVNLGIFLSTFARTELQVVQFIPLVISLQGLLSGIIWPVTSLPRPLQWVARVLPLTWANDALRSVMLRGHGLDDLLPHLAFLTGFALLMLVLAMTTLRREVA
SIO_010081: TRD_RS13880
subclass of: SO_0000673
so part of: TRD_RS13880
location: complement(342975..344048)
location: region:342975-344048:-1
so has part: feature:342975-344048:-1:exon

WP_012642993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342975-344048:-1:exon

TRD_RS10810
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10810
old locus tag: trd_A0355
so part of: sequence
location: complement(344045..344818)
location: region:344045-344818:-1
so has part: feature:344045-344818:-1:exon
subclass of: SO_0000010

position:344045:-1
position: 344045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344818:-1
position: 344818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344045-344818:-1:exon

TRD_RS10810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10810
old locus tag: trd_A0355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873800.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MVSLALLTEASDAAIVAEGVSRIFGPLRAIDRLSVVIPRGVIYGLLGPSGSGKTTFLRMVVGALRPSEGRLLIFGTPMPDRKIAARIGYMPQSPALYPDLTLRENLAFFGAVYRVPRQQLEHRIDELATDLDLLAWLDHPLYRFSTGMLQRASLAIALLHEPDLLVLDEPTIGLDPLLRRVLWQRFRTLASAGTTLLISTHSMDEAERCDLLGFLRNGRLLASDTPAALRAATGQESLEDAFLVLAGQPILPVEPAR
SIO_010081: TRD_RS10810
subclass of: SO_0000673
so part of: TRD_RS10810
location: complement(344045..344818)
location: region:344045-344818:-1
so has part: feature:344045-344818:-1:exon

WP_143714779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344045-344818:-1:exon

TRD_RS10815
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10815
old locus tag: trd_A0356
so part of: sequence
location: 345138..346856
location: region:345138-346856:1
so has part: feature:345138-346856:1:exon
subclass of: SO_0000010

position:345138:1
position: 345138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346856:1
position: 346856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345138-346856:1:exon

TRD_RS10815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10815
old locus tag: trd_A0356
EC number: 1.-.-.-
inference: COORDINATES: protein motif:HMM:NF013434.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate dehydrogenase/oxidase
translation: MLLCRAESLALLREQEFDVLVIGGGITGAGVAFDAAARGLRVALVEGRDFVGGTSRWSTKLVHGGIRYLPQFDIGLVREALIERGRLLANAPLLVEPLPFLLPLYRFNRRPLGIGWLPQQSALQPLLIRAGLLTYDLLAGGLNVGRHRSVPSARFAEWAPLVRTQDLLAAYSYYDARTEDARLVFDVLASAVEQGAVVVNHAPVIGFEKAGGGLVAAWIRDELVNEEFAVRARVFVNATGIWGEELERLTGELPQVHIAPSKGVHLVLPSERVGLKDAAIVLPETDDGRLLFLVPYRPYGEVAILGTTDTGSGPLDAPVATDADIDYLLDHANRYLETTLTRADVISAYAGYRPLIRRGLAETTARLSRSHELVEHANGLISILGGKLTTFRAMAEETVDAAERGLGRPIWHVTAQLTLARRRDWKQVVETVTVRAREMGLEAHVPWLLRGYGAAAHTVLDIAAGDYRLARPLVDGLPYLWAEVVHACRYEQACHIDDVLERRTFVLFLDWHHGLRVAEQVSELMAQELGWSAEQRQLEVERYRRRVLQCCGAEHGIATRLDSGSVSLPWRT
SIO_010081: TRD_RS10815
subclass of: SO_0000673
so part of: TRD_RS10815
location: 345138..346856
location: region:345138-346856:1
so has part: feature:345138-346856:1:exon

WP_012642746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345138-346856:1:exon

TRD_RS10825
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: glpK
locus tag: TRD_RS10825
old locus tag: trd_A0358
so part of: sequence
location: 347686..349200
location: region:347686-349200:1
so has part: feature:347686-349200:1:exon
subclass of: SO_0000010

position:347686:1
position: 347686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349200:1
position: 349200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347686-349200:1:exon

TRD_RS10825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: glpK
locus tag: TRD_RS10825
old locus tag: trd_A0358
EC number: 2.7.1.30
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012920815.1
GO function: GO:0004370 - glycerol kinase activity [Evidence IEA]
GO process: GO:0006071 - glycerol metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol kinase GlpK
translation: MSRFALAIDQGTTSTRAVIFDRESNVIAMDQREHQQIYPQPGWVEHDPMEIRERTQQVVRTALERAGIGGGDIAAVGITNQRETSVVWNRHTGQPYRNAIVWQDTRTDQLCAQLERDGYGPMFRERTGLPISTYFSGPKIRWLLESDPEIRAAAEKGDALFGNIDTWLIWWLTGGPNGGAHVTDVSNASRTMLMNLQTLDWDDELLRALQIPRQMLPAIRSSSDPNAYGYTVADGPLGARVPVCGDLGDQQAALVGQAGLKPGMAKNTYGTGCFVLLNTGTEIVPSKYGLLTTVAYRFGDGPCVYALEGSIAITGALVQWLRDNLGLISQSAEVEELARSVEDNGGIYFVPFFSGAFAPYWRADARGVIVGLTRFVNRGHVARAALEATAYQTRDVVDAMVADSGIELAELRVDGGMVQNELLMQFQADILGVPVIRPVVTETTSLGAAYAAGLAVGYWANEQEIAQYWKEARRWNPQMGAEQRDALYRGWKKAVERSFGWVEL
SIO_010081: TRD_RS10825
subclass of: SO_0000673
so part of: TRD_RS10825
location: 347686..349200
location: region:347686-349200:1
so has part: feature:347686-349200:1:exon

WP_041437276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347686-349200:1:exon

TRD_RS10830
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10830
old locus tag: trd_A0360
so part of: sequence
location: complement(349473..349955)
location: region:349473-349955:-1
so has part: feature:349473-349955:-1:exon
subclass of: SO_0000010

position:349473:-1
position: 349473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349955:-1
position: 349955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349473-349955:-1:exon

TRD_RS10830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10830
old locus tag: trd_A0360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012872773.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VOC family protein
translation: MATRSLNHVSIVAEHLEESVRFYEEVFGLERIPTPNFGHPVQWLRVGDLQLHIFERPEEARRYAHFALTVDDLVTVYEKARARGCLDGDTFTHFLVQLPNGNVQLYVRDPAGNLIEVDWPDIASLPAELQAQCVRLEDRYPQSDWNRQATLFLEPIGSRA
SIO_010081: TRD_RS10830
subclass of: SO_0000673
so part of: TRD_RS10830
location: complement(349473..349955)
location: region:349473-349955:-1
so has part: feature:349473-349955:-1:exon

WP_012642938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349473-349955:-1:exon

TRD_RS13885
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13885
old locus tag: trd_A0361
so part of: sequence
location: complement(350072..350302)
location: region:350072-350302:-1
so has part: feature:350072-350302:-1:exon
subclass of: SO_0000010

position:350072:-1
position: 350072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350302:-1
position: 350302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350072-350302:-1:exon

TRD_RS13885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13885
old locus tag: trd_A0361
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRYLLEGIAVGCSAILALILAVGVALVVIAALPGSESTPVVFPPSLGSAEIMRFIVLFLAIVIAWITGRVLSSRR
SIO_010081: TRD_RS13885
subclass of: SO_0000673
so part of: TRD_RS13885
location: complement(350072..350302)
location: region:350072-350302:-1
so has part: feature:350072-350302:-1:exon

WP_012642786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350072-350302:-1:exon

TRD_RS10840
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10840
old locus tag: trd_A0362
so part of: sequence
location: complement(350521..351810)
location: region:350521-351810:-1
so has part: feature:350521-351810:-1:exon
subclass of: SO_0000010

position:350521:-1
position: 350521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351810:-1
position: 351810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350521-351810:-1:exon

TRD_RS10840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10840
old locus tag: trd_A0362
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011522336.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate aminotransferase family protein
translation: METIQKYREYVCTSFVAAVEPVVVERASGATVVDTSGREYIDCFAGIAVTNAGHCHPKVVAAAKAQADKLVHAASYVYHVPVVADLAERLAQITPGALKKTFFGNSGAEGIETALRMAKAYTGRNEFIALTHSFHGRTVGTLSVTGNMLRKKRGGPYLPGVAFAPAPYLYRNPFGTDDPEVLAQRCADMVEWAIKYQTSGNVAAFIAEPVLGEGGIIVPPANYFRYVKEVLDRYGILFIVDEVQSGFGRTGKLFAIEHYGVEPDIMVMAKGIADGFPLSACIARAEIADAFQPGEHLSTFGGNPVSCAAALANIEVMLEEDLPGQAARKGEQALAQLRELAAEHELIGDVRGLGLMIGVELVSDRRTKQPAAKQAAALRAYCREHGVLIGVGGQEGNVVRFQPPLTITWEQLERALTVFADGLRTVSRS
SIO_010081: TRD_RS10840
subclass of: SO_0000673
so part of: TRD_RS10840
location: complement(350521..351810)
location: region:350521-351810:-1
so has part: feature:350521-351810:-1:exon

WP_012642705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350521-351810:-1:exon

TRD_RS10845
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10845
old locus tag: trd_A0363
so part of: sequence
location: 352007..353230
location: region:352007-353230:1
so has part: feature:352007-353230:1:exon
subclass of: SO_0000010

position:352007:1
position: 352007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353230:1
position: 353230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352007-353230:1:exon

TRD_RS10845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10845
old locus tag: trd_A0363
inference: COORDINATES: protein motif:HMM:NF017760.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MRTYPAFRLLFGTTLTTNAAFWMWSLLIGWLALVLTDSPFFVGLTGFLNGIPMLLVSLPAGVLIDRLDRRLVLFVAQVVVALATVSLVLLLWLERLTPWQLLLAAFVSGAGMAVVFTTRSALVANLVGREALANAVALISTAQNAPRIVGPALAGPLVSAFGLTGAFAVCALFQVASVGITWRLPAVRPSGNRSPFWGAFVEGLVTVWRREQLLALMALATLPTLLIFPYMNLLPVFARDELRLGATGLGVLMALNGLGAVIGSVAVAARREWGESPRVLVATVLLFAAAVFAFAQTSVPWLAAAFLSIAGVMGAVYMATTNTLLQLAVEDEIRGRVLSVYLLTWGLLPIGTLPAGAVADHWGAPLAVSLLVVLAVLAIGAVALRFPLLRRSSLVSEQRFSAGTGRS
SIO_010081: TRD_RS10845
subclass of: SO_0000673
so part of: TRD_RS10845
location: 352007..353230
location: region:352007-353230:1
so has part: feature:352007-353230:1:exon

WP_169302310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352007-353230:1:exon

TRD_RS10850
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10850
old locus tag: trd_A0364
so part of: sequence
location: 353243..354463
location: region:353243-354463:1
so has part: feature:353243-354463:1:exon
subclass of: SO_0000010

position:353243:1
position: 353243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354463:1
position: 354463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353243-354463:1:exon

TRD_RS10850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10850
old locus tag: trd_A0364
inference: COORDINATES: protein motif:HMM:NF019310.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MRWVIPRPWVVRQPALRAVLGLTLLAGLVTGVVVPFLSLVAREKGASYGAVGLMASGFLLAQLVFQFPAGALADRIGRAKPVAAGLAIEGLATAGFAFVEAPSSFVALRVLQGVGLALIYPAVRALIADLTPLERRGEAYAAFWGVLNVGWLLGPAVGGLLAAVVGKTPLVVASGLGEAALALPAWLAFRRFRLPEPKRKADPLGSQRRARLLGTALVAAMLLAFGFEVPVGIFTGIWSIYLSEIGASELELGLSYTAFSVANLVTLPLGGKLANRRPRWRRVLGLAALLGIVVLGYGIPSVPIVLLLGALEGAIAGLLTPTVDAYLSGIAGAQQQGRVQGAYTTAGMSGAALSALGSSVLYSWGHWVPFLVAGTALASLAVPAALLMRRTEQRAVREAAVETVVQ
SIO_010081: TRD_RS10850
subclass of: SO_0000673
so part of: TRD_RS10850
location: 353243..354463
location: region:353243-354463:1
so has part: feature:353243-354463:1:exon

WP_012642570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353243-354463:1:exon

TRD_RS13890
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13890
old locus tag: trd_A0365
so part of: sequence
location: 354482..354925
location: region:354482-354925:1
so has part: feature:354482-354925:1:exon
subclass of: SO_0000010

position:354482:1
position: 354482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354925:1
position: 354925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354482-354925:1:exon

TRD_RS13890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13890
old locus tag: trd_A0365
EC number: 3.1.2.-
inference: COORDINATES: protein motif:HMM:NF024675.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioesterase family protein
translation: MRRVAVPFIVYWGDADPGELIFYPNVFRYVMQAEHALFWGLGYTRQKMQEWGVVNPRVHVEADYHRPLWVHDRGVCRLWVSKLGRSSLRLDFALVKDGEDEPAVTGHLVQVFVDARTMRPVSIPEELREALAAEEPAGEAADSRGAE
SIO_010081: TRD_RS13890
subclass of: SO_0000673
so part of: TRD_RS13890
location: 354482..354925
location: region:354482-354925:1
so has part: feature:354482-354925:1:exon

WP_012642452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354482-354925:1:exon

TRD_RS10860
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: trpS
locus tag: TRD_RS10860
old locus tag: trd_A0366
so part of: sequence
location: 354977..355981
location: region:354977-355981:1
so has part: feature:354977-355981:1:exon
subclass of: SO_0000010

position:354977:1
position: 354977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355981:1
position: 355981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354977-355981:1:exon

TRD_RS10860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: trpS
locus tag: TRD_RS10860
old locus tag: trd_A0366
EC number: 6.1.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008479339.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO process: GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan--tRNA ligase
translation: MAGKPRAFSGIQPTGGIHLGNYLGAIRNWVLQQDQYDNIFSIVDLHAMTIPYDPRELRQRTLEVGSVLLAAGIDPERSILFVQSDVREHTELCWILGTLATFGELRRMTQFKEKSKGNERVGAGLFFYPVLQAADILLYDAAVVPVGEDQKQHIELTRDLAIRFNNTFGETFVVPEPDIKPAGARIMSLTDPLKKMSKSDPDPDSRIELRDPPEVIRRKIRKAVTDSETVIRYDEERKPAISNLLTIYSLLSGIPIPELEERYAGKGYGQFKQDLAEVIIQALAPIQQRLEELVAQPGIVIRTLQEGAAKARELASAKMALVRERCGLGLPPLD
SIO_010081: TRD_RS10860
subclass of: SO_0000673
so part of: TRD_RS10860
location: 354977..355981
location: region:354977-355981:1
so has part: feature:354977-355981:1:exon

WP_012643253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354977-355981:1:exon

TRD_RS10865
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10865
old locus tag: trd_A0367
so part of: sequence
location: 355996..356340
location: region:355996-356340:1
so has part: feature:355996-356340:1:exon
subclass of: SO_0000010

position:355996:1
position: 355996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356340:1
position: 356340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355996-356340:1:exon

TRD_RS10865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10865
old locus tag: trd_A0367
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873629.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MGGASSVSVVQWDVLPVESPRPGIFRQTLHGDRQTVVRYRYAPGSVFPVHAHPEEQVTMVLRGTLALEVAGKESICGPGTVVVIPGGVPHGARVVGEEEVETLNTFVPRRTSAP
SIO_010081: TRD_RS10865
subclass of: SO_0000673
so part of: TRD_RS10865
location: 355996..356340
location: region:355996-356340:1
so has part: feature:355996-356340:1:exon

WP_012642436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355996-356340:1:exon

TRD_RS10870
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10870
old locus tag: trd_A0368
so part of: sequence
location: 356363..356584
location: region:356363-356584:1
so has part: feature:356363-356584:1:exon
subclass of: SO_0000010

position:356363:1
position: 356363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356584:1
position: 356584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356363-356584:1:exon

TRD_RS10870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10870
old locus tag: trd_A0368
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVESMVKKLKRQAAKRVNQRLKQPKHSVPHRYPFKYRQTSRGRVPLTDEDALAMIRWRAARRARKTQAEQKV
SIO_010081: TRD_RS10870
subclass of: SO_0000673
so part of: TRD_RS10870
location: 356363..356584
location: region:356363-356584:1
so has part: feature:356363-356584:1:exon

WP_012643263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356363-356584:1:exon

TRD_RS10875
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: mnhG
locus tag: TRD_RS10875
old locus tag: trd_A0369
so part of: sequence
location: complement(356630..357016)
location: region:356630-357016:-1
so has part: feature:356630-357016:-1:exon
subclass of: SO_0000010

position:356630:-1
position: 356630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357016:-1
position: 357016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356630-357016:-1:exon

TRD_RS10875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: mnhG
locus tag: TRD_RS10875
old locus tag: trd_A0369
inference: COORDINATES: protein motif:HMM:TIGR01300.1
GO function: GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO process: GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: monovalent cation/H(+) antiporter subunit G
translation: MTVLAGLLALIGALLMVIAGIGLLRMPDFYTRMQAAAKAGTLGILLIVAATGLLLGNLSALLHALLVSLFFLLTTPLAAHLLGRAAYLSGIRPLVHEDDLAGQYHPKTHELRSVPHSAPPDRAEALPE
SIO_010081: TRD_RS10875
subclass of: SO_0000673
so part of: TRD_RS10875
location: complement(356630..357016)
location: region:356630-357016:-1
so has part: feature:356630-357016:-1:exon

WP_012642486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356630-357016:-1:exon

TRD_RS10880
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10880
old locus tag: trd_A0370
so part of: sequence
location: complement(357013..357309)
location: region:357013-357309:-1
so has part: feature:357013-357309:-1:exon
subclass of: SO_0000010

position:357013:-1
position: 357013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357309:-1
position: 357309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357013-357309:-1:exon

TRD_RS10880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10880
old locus tag: trd_A0370
inference: COORDINATES: protein motif:HMM:NF015993.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015075 - monoatomic ion transmembrane transporter activity [Evidence IEA]
GO process: GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: monovalent cation/H+ antiporter complex subunit F
translation: MSERLIGFSGVSPLIALSMLLLTVGLLLALVRVVRGPTIPDRVIALDFMASLVVGLLLLLGATLELLSIVDIAIVLALIAFLSTVAFASLIERRTREP
SIO_010081: TRD_RS10880
subclass of: SO_0000673
so part of: TRD_RS10880
location: complement(357013..357309)
location: region:357013-357309:-1
so has part: feature:357013-357309:-1:exon

WP_012642606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357013-357309:-1:exon

TRD_RS10885
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10885
old locus tag: trd_A0371
so part of: sequence
location: complement(357306..357779)
location: region:357306-357779:-1
so has part: feature:357306-357779:-1:exon
subclass of: SO_0000010

position:357306:-1
position: 357306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357779:-1
position: 357779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357306-357779:-1:exon

TRD_RS10885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10885
old locus tag: trd_A0371
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013629357.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na+/H+ antiporter subunit E
translation: MTLFLLNLLLALVWAMAVGRFTVPQLLLGYVLGFLVLATLEPLWGTAQYSGRILRGLRFIAFFFAELLLSSLQIAYDSLTPRLRATPRIIAVPLDAATETEITLLANFLTLTPGTLSLDISADRRTLYVHAMYARDRQTFLTEVKRGLEARLLEVLR
SIO_010081: TRD_RS10885
subclass of: SO_0000673
so part of: TRD_RS10885
location: complement(357306..357779)
location: region:357306-357779:-1
so has part: feature:357306-357779:-1:exon

WP_012642700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357306-357779:-1:exon

TRD_RS10890
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10890
old locus tag: trd_A0372
so part of: sequence
location: complement(357776..359293)
location: region:357776-359293:-1
so has part: feature:357776-359293:-1:exon
subclass of: SO_0000010

position:357776:-1
position: 357776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359293:-1
position: 359293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357776-359293:-1:exon

TRD_RS10890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10890
old locus tag: trd_A0372
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013179142.1
GO function: GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO process: GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na+/H+ antiporter subunit D
translation: MGLLLSLPLLLPLGSSLLLFVTRHNRRASHFVAITSATVLLVLVSGLTLQVARDGLLVVAIGSWPPPYGIVLVADLLSVLMLLVCTLVAWATVLYSTAWIDPARERLGYYPLIFALLFGVNGTFLTGDIFNLYVWFEILLMSSFVLLVLGAERGQVEGGLKYVALNLLASAFFLSAVGVLYGVTGTLNFAHLSRAVLGIDPLVLDLLAVLFGIAFGIKAAVFPLFFWLPASYHTPPVPVSALFAGLLTKVGVYSLIRIFTLLFVHDPGWSHRLLLVCAALTMLTGVLGALAQQDVRRILSFHIVSQIGYMIFGLALLTPLGLASSVFYLVHHIVVKTNLFLIGGLIERLGGSSRLSDLGALYRARPWLGLLFLVPAFSLAGLPPLSGFLAKLLVIRAGLAAGAYWATAIAVIVSLFTLLSMLKIWNEAFWKPRPVEDPPRQPLSTLLLLPVLVLAAVTVLLGTASEPLLVLATRAADQLLDPQIYQRAVLGQLGSPALASIGGAP
SIO_010081: TRD_RS10890
subclass of: SO_0000673
so part of: TRD_RS10890
location: complement(357776..359293)
location: region:357776-359293:-1
so has part: feature:357776-359293:-1:exon

WP_012642787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357776-359293:-1:exon

TRD_RS10895
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10895
old locus tag: trd_A0373
pseudo: true
so part of: sequence
location: complement(<359380..359721)
location: region:359380-359721:-1
so has part: feature:359380-359721:-1:exon
subclass of: SO_0000010

position:359380:-1
position: 359380
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:359721:-1
position: 359721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359380-359721:-1:exon

TRD_RS10895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10895
old locus tag: trd_A0373
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010854939.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Na+/H+ antiporter subunit C
SIO_010081: TRD_RS10895
subclass of: SO_0000673
so part of: TRD_RS10895
location: complement(<359380..359721)
location: region:359380-359721:-1
so has part: feature:359380-359721:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359380-359721:-1:exon

TRD_RS10900
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10900
old locus tag: trd_A0374
so part of: sequence
location: complement(359725..360147)
location: region:359725-360147:-1
so has part: feature:359725-360147:-1:exon
subclass of: SO_0000010

position:359725:-1
position: 359725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360147:-1
position: 360147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359725-360147:-1:exon

TRD_RS10900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10900
old locus tag: trd_A0374
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010942979.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na+/H+ antiporter subunit B
translation: MSTLPSIILRTAVRWISPLLLLFSLFLLLRGHHEPGGGFAGGLIASTGFALLTFGYSLRTAQRLLRVQPLTLVAIGLAFAAASGLFAWINRTSFLTGLWIGVPLPGNLRVDLGTPLLFDIGVYLTVIGATLTMLFAFAEE
SIO_010081: TRD_RS10900
subclass of: SO_0000673
so part of: TRD_RS10900
location: complement(359725..360147)
location: region:359725-360147:-1
so has part: feature:359725-360147:-1:exon

WP_012642942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359725-360147:-1:exon

TRD_RS10905
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10905
old locus tag: trd_A0375
so part of: sequence
location: complement(360144..362474)
location: region:360144-362474:-1
so has part: feature:360144-362474:-1:exon
subclass of: SO_0000010

position:360144:-1
position: 360144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362474:-1
position: 362474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360144-362474:-1:exon

TRD_RS10905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10905
old locus tag: trd_A0375
inference: COORDINATES: protein motif:HMM:NF012581.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: proton-conducting transporter membrane subunit
translation: MLAGLASLFILAFLAPWLGDRLAARFGYLAALTSFVLFGWYASQLPAVTHGPTRVETISWLPTLGADLTLRLDGLGLLFALLVTGIGALIALYSVAYLEHHPRRRAFWVAFLAFEAAMLGLVLADDVILLFVFWELTSITSFFLIGLENERERARTSATQALIVTGSGGLALLTGLLILVQRTGSLRLSEILAQGPLDADGLVTTAFLLILLGAAAKSAQVPLHFWLPNAMEAPTPVSAYLHSATMVKAGVYLLARMTPAFGEHPWWQPSLGVLGGATALVGALLAVQQRDLKRLLAYSTISALGTLVFLLSFGEPGWLPFALFLLAHALYKGGAFLLAGAIDHATGERVLDRLGGLAGLFPGLAIVAGLVVLAAAGLPPTLSFVAKELVLETSWNELPLPGLLVLLAALSGQTAVAWLLLRPFVGQPRTAPEHAHAPAWQLLTAPALLGAAASLSGLLTSSLGPLASAVVASLSGHEPTSVKLALWHGLTPALGLSLLVLLLGGALAVSWPIALRLGDRLRTTESWSPTAGALAAWGSESWYFRTLAVINSVAIRQTRLLQSGYLRVYVMVTVLTLVSLSLLTVGRYRAELLAHWSPPHLSAIDVVDASLALIILVAALVAVRATERLAAIAALGALGFSLAVLYARFSAPDLAITQVLVDTLTVVLLVFAFYRLPRYARLSTTRARVRDAIVAMLFGMTMSLFAFLMIGSPARERISTFFLEQSYPAAHGRNVVNVILVDFRALDTLGEITVLGLAGLGVTALLYRRRQKEEGT
SIO_010081: TRD_RS10905
subclass of: SO_0000673
so part of: TRD_RS10905
location: complement(360144..362474)
location: region:360144-362474:-1
so has part: feature:360144-362474:-1:exon

WP_012642401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360144-362474:-1:exon

TRD_RS10910
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10910
old locus tag: trd_A0377
so part of: sequence
location: 362801..363565
location: region:362801-363565:1
so has part: feature:362801-363565:1:exon
subclass of: SO_0000010

position:362801:1
position: 362801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363565:1
position: 363565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362801-363565:1:exon

TRD_RS10910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10910
old locus tag: trd_A0377
inference: COORDINATES: protein motif:HMM:NF024859.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VOC family protein
translation: MLRQIDHLVVLVPDLEAAIQEYRGAGFTVVPGGTHPTGTHNALIGFGDGAYLELLAFYEDNPAHRWHRFRAAGGGIIDLCVLVEGIEAECQRLERAGFTYQLAAGSRTRPDGFTIAWKNATPPDELTGQLPFLIEDVTPRQERVPHGQQAEHPNGARGVAEVVIAVRDLAPVVSAWRALLEAPGEAAEDPILGTPVHRFALGPHRVSLAAGPHPLIEERLGRAGPGPLLTRLWAWTTADVTLGSARFALLQLER
SIO_010081: TRD_RS10910
subclass of: SO_0000673
so part of: TRD_RS10910
location: 362801..363565
location: region:362801-363565:1
so has part: feature:362801-363565:1:exon

WP_012642770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362801-363565:1:exon

TRD_RS10915
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10915
old locus tag: trd_A0376
so part of: sequence
location: complement(363562..364167)
location: region:363562-364167:-1
so has part: feature:363562-364167:-1:exon
subclass of: SO_0000010

position:363562:-1
position: 363562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364167:-1
position: 364167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363562-364167:-1:exon

TRD_RS10915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10915
old locus tag: trd_A0376
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013166489.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR00730 family Rossman fold protein
translation: MEDRRVPLERVCVFCGSRLGNRPVYRLHAQRLARLLAERGIGIVYGGGSIGLMGVVADAALEAGGEVIGVIPEVLMAREFAHPNLTRLHIVRTMHERKALMSDLADGFVALPGGFGTLDELFEIVTWAQLGIHTKPVVLLNSSDYYRHLLASVRHAIDEGFIAPEHAGLLIVTDDPEEAVEALLTYQPPIAVPRWMGREER
SIO_010081: TRD_RS10915
subclass of: SO_0000673
so part of: TRD_RS10915
location: complement(363562..364167)
location: region:363562-364167:-1
so has part: feature:363562-364167:-1:exon

WP_012643188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363562-364167:-1:exon

TRD_RS10920
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10920
old locus tag: trd_A0378
so part of: sequence
location: 364348..364662
location: region:364348-364662:1
so has part: feature:364348-364662:1:exon
subclass of: SO_0000010

position:364348:1
position: 364348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364662:1
position: 364662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364348-364662:1:exon

TRD_RS10920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10920
old locus tag: trd_A0378
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873594.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin family protein
translation: MVQVIDPIRDRAGLERKLATTSYHVDRERAHIWIIDPDVCLQCERQQCIVCCPAACYTPLPDGRVKFSHEGCVECGTCRIVCYEFRNIAWTYPRGGFGVQYRYG
SIO_010081: TRD_RS10920
subclass of: SO_0000673
so part of: TRD_RS10920
location: 364348..364662
location: region:364348-364662:1
so has part: feature:364348-364662:1:exon

WP_012642925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364348-364662:1:exon

TRD_RS10925
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: merA
locus tag: TRD_RS10925
old locus tag: trd_A0380
so part of: sequence
location: complement(365005..366687)
location: region:365005-366687:-1
so has part: feature:365005-366687:-1:exon
subclass of: SO_0000010

position:365005:-1
position: 365005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366687:-1
position: 366687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365005-366687:-1:exon

TRD_RS10925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: merA
locus tag: TRD_RS10925
old locus tag: trd_A0380
EC number: 1.16.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014345589.1
GO function: GO:0016152 - mercury (II) reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mercury(II) reductase
translation: MTPANHESALVTYELDVEGMTCRDCERHVETAVEASGGIEPRADWRRRRVRFAAPPTFDPQPVFAAIRAASGQLHRYEPGQLRRLAPVQLDDESPDADADLVIIGGGSAAFAAAIEAHQLGARVIMIERGTLGGTCVNIGCVPSKFLLRAAEVAHLAATRRYRGIRSQLEAVDLAAHVAQKQDLIAALRREKYEELVDYYGWELLHGTARFVDPQTIAVGDRLIRARAFLIATGASPALPPLPGLAETPFLTSTSALDLERVPTSLLVLGAGYVALELGQAFQRLGSRVTLVQRRARLLPEIELKLAEQLQQALAAEGIRFRLGVLPQRVERVPGGVRLIVQTSDGREEALEAETLLVATGRRPNVDDLDLAAAGVELDARGAPRLDPTLRTTNPRIYAAGDVTLGPQFVYVAAAQGRLAARNALLGEQQILRLDAVPAVIFTQPQLASVGLTRADAEARGHRVVTGFAPASVIARERVELQPFGGVFLVADAESGRILGVQALASAAGELIEAATLAVHAGLTLADLREHLAPYLTVGEGLRLAALAVEQDPARLSCCA
SIO_010081: TRD_RS10925
subclass of: SO_0000673
so part of: TRD_RS10925
location: complement(365005..366687)
location: region:365005-366687:-1
so has part: feature:365005-366687:-1:exon

WP_012642732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365005-366687:-1:exon

TRD_RS10930
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10930
old locus tag: trd_A0381
so part of: sequence
location: complement(366684..367235)
location: region:366684-367235:-1
so has part: feature:366684-367235:-1:exon
subclass of: SO_0000010

position:366684:-1
position: 366684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367235:-1
position: 367235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366684-367235:-1:exon

TRD_RS10930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10930
old locus tag: trd_A0381
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLDSPRDRLSTLARGLEGLATLAGLALTTLACCNWLVIQWLALLLSALGGTAAFTFLVRLETPLLAAVMVILLIASLLARDTFSRILDLILAALVLVLAVLLLAWEQDPAILWSLPLLGWLFVHRQQTLFVAFAGAAGLRVIHWSLSLMSRSTCRARAALRTEQAGLGEFAPCADIAKEEGR
SIO_010081: TRD_RS10930
subclass of: SO_0000673
so part of: TRD_RS10930
location: complement(366684..367235)
location: region:366684-367235:-1
so has part: feature:366684-367235:-1:exon

WP_012643299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366684-367235:-1:exon

TRD_RS10935
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10935
old locus tag: trd_A0383
so part of: sequence
location: 367650..368168
location: region:367650-368168:1
so has part: feature:367650-368168:1:exon
subclass of: SO_0000010

position:367650:1
position: 367650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368168:1
position: 368168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367650-368168:1:exon

TRD_RS10935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10935
old locus tag: trd_A0383
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008479844.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (2Fe-2S) ferredoxin domain-containing protein
translation: MYWCRAHVLVCTANHCSQKGAQQVAARLRLELKRAGLDAEIMVNTCDSIDLCDIGPNIVVYPQGWIYRNVQVGDLPEVIESLRHGQHPVERLVLRPDSEDERRRRALYHAAVAQEPLAVTAFAALAERYGFDEAWVAEQARRGFIARKPGDDGDRITVTSKARHRYGLPDAT
SIO_010081: TRD_RS10935
subclass of: SO_0000673
so part of: TRD_RS10935
location: 367650..368168
location: region:367650-368168:1
so has part: feature:367650-368168:1:exon

WP_012643242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367650-368168:1:exon

TRD_RS14335
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: hpt
locus tag: TRD_RS14335
old locus tag: trd_A0384
so part of: sequence
location: 368419..369420
location: region:368419-369420:1
so has part: feature:368419-369420:1:exon
subclass of: SO_0000010

position:368419:1
position: 368419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369420:1
position: 369420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368419-369420:1:exon

TRD_RS14335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: hpt
locus tag: TRD_RS14335
old locus tag: trd_A0384
EC number: 2.4.2.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008479846.1
GO process: GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypoxanthine phosphoribosyltransferase
translation: MTAAVQQSSVRRADAQRPRFAHPAEAEFAAFLDFYRIAWEYEPRSFPLRWQDGRIVEQFTPDFYLPEQDLYVELTTMKQSLVTRKHRKVRRLRELYPHVNIVLLYRKDYHEILSRFGYGSVDITSLRPDQIERVLLSPAEIQRRVAELGQQISTDYAGESLVLVGVLKGITFFLADLARAITRPLAIDYLQLSRDLREGVAIRKDLDLDIRGKHVLLVEDIVNTGLTLDFIMRVLREREPASLEVCALLDKAERRLVSVPVKYVGFTIPNEFVVGYGLDYRELYRNLPFICVLKREVYEANGNGHLIGGTGQEAAAEAAEPSLVATRVEVGSG
SIO_010081: TRD_RS14335
subclass of: SO_0000673
so part of: TRD_RS14335
location: 368419..369420
location: region:368419-369420:1
so has part: feature:368419-369420:1:exon

WP_012643103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368419-369420:1:exon

TRD_RS10945
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: mutM
locus tag: TRD_RS10945
so part of: sequence
location: complement(369351..370265)
location: region:369351-370265:-1
so has part: feature:369351-370265:-1:exon
subclass of: SO_0000010

position:369351:-1
position: 369351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370265:-1
position: 370265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369351-370265:-1:exon

TRD_RS10945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: mutM
locus tag: TRD_RS10945
EC number: 3.2.2.23
EC number: 4.2.99.18
inference: COORDINATES: protein motif:HMM:NF013328.2
GO function: GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
translation: MPELPEVEAARRGIAEQLLGRVCTGYELYRPRLIVAPTGLTLALLVGQPLREVGRKGKYLWLTFPTLTLLVHLKLTGQLVARGSNIPGFAAGHPIPPYDAPLPHKSTALRLDFAPDEHLYLTDVRHFARVQLMLPDELPTTLASLSLGPDALSDEFTLESLRRGLDRRRGTSLKAALLDQRVVAGLGNIYVDESLWFAQLHPARLVGTLDDGEVVRLYQAIREVLAIAVPQGGAKILHGRAVPPVGEFPYVHGRAGQPCPRCGTSIVKRTIAGRGTYYCPVCQPEPTSTRVATSEGSAASAAAS
SIO_010081: TRD_RS10945
subclass of: SO_0000673
so part of: TRD_RS10945
location: complement(369351..370265)
location: region:369351-370265:-1
so has part: feature:369351-370265:-1:exon

WP_041437284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369351-370265:-1:exon

TRD_RS10950
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10950
old locus tag: trd_A0385
so part of: sequence
location: complement(370258..370674)
location: region:370258-370674:-1
so has part: feature:370258-370674:-1:exon
subclass of: SO_0000010

position:370258:-1
position: 370258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370674:-1
position: 370674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370258-370674:-1:exon

TRD_RS10950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10950
old locus tag: trd_A0385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873600.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSVRRASYTPLRCPLCGGELEEVVVRQLGRVTARLPWQLHAGRCPEHGWFQAEVISRPPREIFPVNRPGGIARRIVLEGKEIYAFPTIWNRLDTRQEVDPFDTRYWQIDWERLGIRPPTRAVQPELVETLAGSRRRA
SIO_010081: TRD_RS10950
subclass of: SO_0000673
so part of: TRD_RS10950
location: complement(370258..370674)
location: region:370258-370674:-1
so has part: feature:370258-370674:-1:exon

WP_012642707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370258-370674:-1:exon

TRD_RS10955
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10955
old locus tag: trd_A0386
so part of: sequence
location: complement(370948..372066)
location: region:370948-372066:-1
so has part: feature:370948-372066:-1:exon
subclass of: SO_0000010

position:370948:-1
position: 370948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372066:-1
position: 372066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370948-372066:-1:exon

TRD_RS10955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10955
old locus tag: trd_A0386
EC number: 1.1.99.36
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012642824.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NDMA-dependent alcohol dehydrogenase
translation: MKSRAAVLYGPTRSFSIEEIDVDEPKEGEVLVKLVATGLCHSDWHFATGAAPVRFPMVVGHEGAGIVEKVGPGVSEVQPGDHVVLCYIPACGKCRWCLSGLAALCDRGILLTQGAQLDGTFRFHKDGQDIAQFALVSAFSEYTVCPVDSVIKIDPDLPLDRACLVGCAVPTGWGAAVNRARVRPGETVAIFGTGGVGMNAVQGAALAGAEKVIAINLVDWKLEKAKEFGATHTINPTREDPVQRIMDITHGVGADATILTPSLVTPSLLTTATRATRKAGRTVIVGAIGRDPNEVETHPLDLMFMLMAKEVFGTIFGHNVPRIDIPRLLALYRDGKLKLDELVTRRYRLEEINQAYHDVERGQVIRGVLVFD
SIO_010081: TRD_RS10955
subclass of: SO_0000673
so part of: TRD_RS10955
location: complement(370948..372066)
location: region:370948-372066:-1
so has part: feature:370948-372066:-1:exon

WP_012643083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370948-372066:-1:exon

TRD_RS10960
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10960
old locus tag: trd_A0388
so part of: sequence
location: 372388..372864
location: region:372388-372864:1
so has part: feature:372388-372864:1:exon
subclass of: SO_0000010

position:372388:1
position: 372388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372864:1
position: 372864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372388-372864:1:exon

TRD_RS10960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10960
old locus tag: trd_A0388
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADRDVVEALIATYRELNQRFRPLLAAMNADAGAVEDPTSPLGILYRLRNRELNASQAIKEMLRGGERTIVDDEAEPLVTLQQTALGLVPIVLLSQFGTAREATLAMVRDLPDSVWQQEFETPRGRMTLRAYLETLIARDREAIRALEERLGQPAPKS
SIO_010081: TRD_RS10960
subclass of: SO_0000673
so part of: TRD_RS10960
location: 372388..372864
location: region:372388-372864:1
so has part: feature:372388-372864:1:exon

WP_012642597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372388-372864:1:exon

TRD_RS13895
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13895
old locus tag: trd_A0389
so part of: sequence
location: 372904..374268
location: region:372904-374268:1
so has part: feature:372904-374268:1:exon
subclass of: SO_0000010

position:372904:1
position: 372904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374268:1
position: 374268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372904-374268:1:exon

TRD_RS13895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13895
old locus tag: trd_A0389
inference: COORDINATES: protein motif:HMM:NF021214.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase assembly protein
translation: MPALLLPVLHTSTAPVDLMRAWHLDPPLTALLVTAAAAYLIAWYVAPRHGRRRVSRWRVLAYLAGLEVIAVALMGPPDHGNGARFSVHMVQHTLLMLVAPPLLVLGQPGRVILRGLPAGSLRWFAQQHQVRSLLAVSTQPAVVFLAATVPFVLWHYPPLYEAAVRDPLVHELEHLTFFLGSLLFWVTLAEALPAHCRLRATAKILLTFAVWMATDLVCAAVTLAPRPLYRVYEEAAALWGFDPLADQRLGGAIMWVAGGGLYAAVLVGLLVRSTRPERRTVRLSRGARAPERLLFPLAALGLALVPLAFLRYGVVGSAFGAPAAMVDRLREDPSVFEQRVSTFVTMYQVGEYEGVPIVAPPPGVEVYLVGRVDGWYPVLELQEGVQYRLLVSASDVPHALSVDLGAERLTVRVVPGDVAVVPLRPERAGTYEIRCTELCGPSFREMTGRIIVTE
SIO_010081: TRD_RS13895
subclass of: SO_0000673
so part of: TRD_RS13895
location: 372904..374268
location: region:372904-374268:1
so has part: feature:372904-374268:1:exon

WP_012642898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372904-374268:1:exon

TRD_RS13900
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13900
old locus tag: trd_A0390
so part of: sequence
location: 374550..377975
location: region:374550-377975:1
so has part: feature:374550-377975:1:exon
subclass of: SO_0000010

position:374550:1
position: 374550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377975:1
position: 377975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374550-377975:1:exon

TRD_RS13900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13900
old locus tag: trd_A0390
inference: COORDINATES: protein motif:HMM:NF012492.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MPEARTSVEVRAWFWWFVRSLCGEGTLGSTERNVLGVLPVPVRSALLRAVQEIDPDALESLDVRRAGLHAEDGNYVWVHSWRFAGGDEPTVLRRTARRPSVALELVGSFLEEFRAWQRAFLSLLRLATEQGVRQLRVGVTGASLPVVELAVADALATVERASEFYGITVALPDIELLCASPRHVELAPFVSQVYRDHDGTVFVDLPRTPFACRVENRLPGQGIVFLDGWQSGSSETVEDSWWLAEQSLRLAALQQRPVGLRREVLDFFARRFFRIPQLKEQQVTLIQRTLRGESSLGVLPTGFGKSLVFQLSALLLPSATLVISPLRSLMRDQLLNLEQNGVVTAVAITGSDSESEKRAKLEGLRTGRYRLVYVAPERLQIAGFLRELRSVGADHPIGLLVVDEAHCVSEWGHDFRPAYLRIPRLRQELQEVAGRTIPIVGLTATASRLVRADILATLELSEADVVQETTSDRPNLSYSVHTPADLGASEKEHALLRLLGERLPRTLRFTPNRLYFSASPHKETGIVFCIYANPHGKTTLQEGVHWVASVIAKHLFAERRAIPVHASTPPTRCPSCRSPLWRSGSPHECLKCGHKFEKPVGSPRWDEEVARIQDEFQRNEHPMLVATKGFGMGIDKPNIRYVVHYNLASGIEAYYQEVGRAGRDGEHAHSALLYRPPHPDCRPQIAAALGEPPCVVDRQAYRFYRCPFGLATLCDYGLQARFIRGNYPGVEEDTEETLKYWRFVREGRSIVVRTSQDDEELTRVQLALYRLQLLGLVQDFSLTYQRLTEVQIDAVPVRDWRTEDVLEGLRRYLQRTSVVLEQLSNGSSGSGAVSDLSVAFEGLVRQSRSLEREELVRRAVTILLTRVYQVVPPMRYQMLLNELDYATSHERGECRRLVLLARFDTTPPPDTYRCGFCDVCVPDLVFPPGKRAELPLVDVGLEELARRLPELLERYDGERLRAFVEAVERRGGVAGMLARVTTRLEQEATNVAALYLAGALARRRPGREREAWGYLERGIAEAIRQGLSREALLVFAEEAAELDALQTLVLLTGTGGPFDSLEGRQELLEYAVAALGEEAFQTRLLLALLASERFLQQSEAILLPLERALSRLASTVTFLEGLRERMEASIVAGDGEHEREP
SIO_010081: TRD_RS13900
subclass of: SO_0000673
so part of: TRD_RS13900
location: 374550..377975
location: region:374550-377975:1
so has part: feature:374550-377975:1:exon

WP_226980765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374550-377975:1:exon

TRD_RS10975
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10975
old locus tag: trd_A0391
so part of: sequence
location: 377959..378600
location: region:377959-378600:1
so has part: feature:377959-378600:1:exon
subclass of: SO_0000010

position:377959:1
position: 377959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378600:1
position: 378600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377959-378600:1:exon

TRD_RS10975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10975
old locus tag: trd_A0391
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSESPDSFLKLRRLEQQLASAQQAANTVESIVGEFTELGDRLAQVVSLYEHSLTLLQQHEQQFSSLLAEAREKLATLERDGAQVLAHAERTVSRLEREHEERWRMAHALVEELVTRIQGLEQNWQELVRHYGESLSSIRADVAQLREYLTMLEGRVGQLEAVNERLAARLERTERGLRRALLMAAGAGIGIGAIGLAIGCLVMVALFGSAAAR
SIO_010081: TRD_RS10975
subclass of: SO_0000673
so part of: TRD_RS10975
location: 377959..378600
location: region:377959-378600:1
so has part: feature:377959-378600:1:exon

WP_012642682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377959-378600:1:exon

TRD_RS14910
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14910
old locus tag: trd_A0392
so part of: sequence
location: 378929..379084
location: region:378929-379084:1
so has part: feature:378929-379084:1:exon
subclass of: SO_0000010

position:378929:1
position: 378929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379084:1
position: 379084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378929-379084:1:exon

TRD_RS14910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14910
old locus tag: trd_A0392
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873625.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEQRERPERIPWPQVLLDDIFLLLMAGLVVPTLFYLIWGLIDLGFIPLFGR
SIO_010081: TRD_RS14910
subclass of: SO_0000673
so part of: TRD_RS14910
location: 378929..379084
location: region:378929-379084:1
so has part: feature:378929-379084:1:exon

WP_012642573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378929-379084:1:exon

TRD_RS10980
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10980
old locus tag: trd_A0393
so part of: sequence
location: 379110..379661
location: region:379110-379661:1
so has part: feature:379110-379661:1:exon
subclass of: SO_0000010

position:379110:1
position: 379110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379661:1
position: 379661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379110-379661:1:exon

TRD_RS10980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10980
old locus tag: trd_A0393
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873626.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome
translation: MASRVSALAKPRGVWWERLGPDERLWVWLAVIWGIAMFVMIAFVWPLVGQEQNRLSSYRVDPAAFAAEAEAFIARYQVGQLDGVPVVAPPPGGDVYLDARAFAWQPVIQLQRGQTYRFLISSRDVQHGFSLVMPPHSINVQVLPGYVTVLTLTPEKAGEFPLICNEYCGLGHHLMIGRIVVKE
SIO_010081: TRD_RS10980
subclass of: SO_0000673
so part of: TRD_RS10980
location: 379110..379661
location: region:379110-379661:1
so has part: feature:379110-379661:1:exon

WP_012643182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379110-379661:1:exon

TRD_RS10985
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10985
old locus tag: trd_A0394
so part of: sequence
location: 379671..381401
location: region:379671-381401:1
so has part: feature:379671-381401:1:exon
subclass of: SO_0000010

position:379671:1
position: 379671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381401:1
position: 381401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379671-381401:1:exon

TRD_RS10985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10985
old locus tag: trd_A0394
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873627.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO process: GO:0009060 - aerobic respiration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cbb3-type cytochrome c oxidase subunit I
translation: MAMVGAMRRCEITGLSVDRSAERLIMLNAVTAVIYLAIGGILALLIALTRWQTVHLLGPQRFYEFLSTHGMVMLIFWILFFEVAGLIFASTVLLSTRMTIPRLGWLAYGLMLGGSVVATVLMLSGRATVMFTSYPPLRAQTHWYYAAVLVFAVGAILAVVHFFVNIVAARLRGEVSSLPLFTFALIGAAIIALWSLVSGALALFPVWLWTLGVIPEVDPGIYRLLYWGLGHGAQQVNLAAMVGVWYGLASLTTGARPLNEGLSRIAIVLYVLFINMGAMHHLLVDPGLGTWVKNVNASYFMYAAVMGSLIHAFSIPASMELALRERGFRRGLFEWLRRAPWGEPGFAALVVSMVLFGLLGGISGVIIGGPQVNMISHNTLLIPAHFHMTVVAGTTTAFMGIAYYLVPLIFQRQLLFRRLAQWQPYVYGLGMLILGLGLGLAGHWGVPRRHWDITFSTAPALGVNLQELRPEIAVFLAMVGIGGVIAVVGGAMFVLAAVATVFVGQRTPRPAVGRIIPEVFSPYPAIAGGAGEPAKTTHRGFEVPGTLVISVAFLILFIFLYGFSWFELSRVPWKIG
SIO_010081: TRD_RS10985
subclass of: SO_0000673
so part of: TRD_RS10985
location: 379671..381401
location: region:379671-381401:1
so has part: feature:379671-381401:1:exon

WP_012643264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379671-381401:1:exon

TRD_RS10990
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10990
old locus tag: trd_A0395
so part of: sequence
location: 381508..383310
location: region:381508-383310:1
so has part: feature:381508-383310:1:exon
subclass of: SO_0000010

position:381508:1
position: 381508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383310:1
position: 383310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381508-383310:1:exon

TRD_RS10990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10990
old locus tag: trd_A0395
EC number: 2.5.1.141
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873603.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO process: GO:0048034 - heme O biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heme o synthase
translation: MGEGRQSIRWLALAVAIAGYLLIVIGGTVRVTGAGLGCGPEWPLCNGRLVPGWDLLAWIEYVHRLIALAVILLTGAVAVASWRARSPDRWMVRLPLIAAGLVLVQAMLGAITVWTHLEAAVVALHLGVALSYLAVALVLAFRTWFPALARVARRSPLRPWLVAALGAVFLLMLSGAYTAKRGAGFACPEWPFCGGFWIPTGWTNVDVHLTHRLIALVAVLLVAGVAWKARRVRGESRWAVGLATAAAVLMVAQVFVGAANIWFRLHPAVSVAHLAVATIVWVLLVLAVLADRALASATVQQERAAVRGAMQRPLGEVVRDYLVLTKPGVMVLLLVTTLCAMLVAAQGVPSLWTLFWTLVGGALASGGAGAINHYVDRDIDAIMTRTRRRPLPAGRVAPEYALLFGIVLSVLAVYVLTAFVNPVAAVLSLSGNLFYVFVYTIWLKRTTPQNIVIGGAAGAVPPLVGWAAVTGQVSVPALLMFLLVFAWTPPHFWALALYKRGDYAAAGVPMLPAVRGEEETRRQILAYTVAMVLASLLFYPLGVLGVPYLVAAMVLGARFLWLVARLYRERSDQLAKRVFLYSMQYLGLLFAAMVIDAVVF
SIO_010081: TRD_RS10990
subclass of: SO_0000673
so part of: TRD_RS10990
location: 381508..383310
location: region:381508-383310:1
so has part: feature:381508-383310:1:exon

WP_143714781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381508-383310:1:exon

TRD_RS10995
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS10995
old locus tag: trd_A0396
so part of: sequence
location: complement(383427..384461)
location: region:383427-384461:-1
so has part: feature:383427-384461:-1:exon
subclass of: SO_0000010

position:383427:-1
position: 383427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384461:-1
position: 384461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383427-384461:-1:exon

TRD_RS10995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS10995
old locus tag: trd_A0396
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006301928.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginine deiminase family protein
translation: MDTSERPSTLRQTEAYYHLVLERMIPKAEPAFEAPEMQERVWGRRWGVENDVGRLRLCVVHRPGDEMLTVQPEGHYDPTIGAYIDEENQWYWRDSNPPDIARMQAEHDALVNALRAEGVEVVSVDCPSRDPHAVFTRDMAVAVKGGAVVCRLGLVGRHPQAGRRGEEAFITRLLAELGMPILHTIHGTGLLEGGSVCWLNDSTVAVGMSYRQNEAGVRQLEAVLAEQGVRLVRVPLPGYALHLDGACVMVDYDKALINLTRLPYWFLDLLRELDIQPIHVWPTEPQAVNCLAVRPARVIMPAGCPRTRERLEAAGIETVEIPYDEILKNGGGIHCSTLPLIRDP
SIO_010081: TRD_RS10995
subclass of: SO_0000673
so part of: TRD_RS10995
location: complement(383427..384461)
location: region:383427-384461:-1
so has part: feature:383427-384461:-1:exon

WP_012643027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383427-384461:-1:exon

TRD_RS11000
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11000
old locus tag: trd_A0397
so part of: sequence
location: 384791..385660
location: region:384791-385660:1
so has part: feature:384791-385660:1:exon
subclass of: SO_0000010

position:384791:1
position: 384791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385660:1
position: 385660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384791-385660:1:exon

TRD_RS11000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11000
old locus tag: trd_A0397
inference: COORDINATES: protein motif:HMM:TIGR01856.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidinol-phosphatase
translation: MLEGSYHNHPGYCDGSGTVEAYIETAREAGLAAVGFSSHAPVPFPCDWTMTVERFQQYLTDVRAARERWLGRFPVWLGVELDYLEPALVPEGMAFQRAVVLSSGLDYAVVSLHFMGRDPEGQLWAVDESAEAFARQLEDVYRGDVRQLIEEYYGLLARLADWAARLDLPVVIGHLDKVKQWNVGERYFDDSAAWYRAAVERALLAISRAGLPIELNTSGLRRPIGAPYPGEWILRRCRELGIPVLIGADAHRPEDVAAGFSEARALLSAAGYRETLVLTERGWKTVPLA
SIO_010081: TRD_RS11000
subclass of: SO_0000673
so part of: TRD_RS11000
location: 384791..385660
location: region:384791-385660:1
so has part: feature:384791-385660:1:exon

WP_012642734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384791-385660:1:exon

TRD_RS11005
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11005
old locus tag: trd_A0398
so part of: sequence
location: 385733..387022
location: region:385733-387022:1
so has part: feature:385733-387022:1:exon
subclass of: SO_0000010

position:385733:1
position: 385733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387022:1
position: 387022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385733-387022:1:exon

TRD_RS11005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11005
old locus tag: trd_A0398
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAYPKHIQDFLHLLETSPEFRALVRSLLLSEELLQLPDLVRSLAATQERLAQQLESFQQAVERALAAVSAQQAETAAQIAALVDRMEQVEQQQAATTEQIRQLTASIERVEAQIEALTARMERVEAQIEALTERMERVEAQIGALTERMERVEAQIEALTARMERVEAQIEALTARMERVEAQIEALTARMERVEAQIEALTARMERVEAQIEALTARMERVEAQIEALTARMERVEAQIEALTARMERVEAQIEALTEQMQQMAAQIAALTERMQDFERRLERVERDLGRLKGLVLPLVVERRFGGLFRKILRRPRVLPSEELTRLVEDGADAGLLDEREAEQLLLVDLVLEGRDATDGGEPIYVVCEISWGVGISDILRARERAALLERVARRPVRPAVLGTWLTREGEEALADVTYVAVPESFFD
SIO_010081: TRD_RS11005
subclass of: SO_0000673
so part of: TRD_RS11005
location: 385733..387022
location: region:385733-387022:1
so has part: feature:385733-387022:1:exon

WP_012642843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385733-387022:1:exon

TRD_RS11010
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11010
old locus tag: trd_A0400
so part of: sequence
location: complement(387529..389796)
location: region:387529-389796:-1
so has part: feature:387529-389796:-1:exon
subclass of: SO_0000010

position:387529:-1
position: 387529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389796:-1
position: 389796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387529-389796:-1:exon

TRD_RS11010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11010
old locus tag: trd_A0400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873616.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: xanthine dehydrogenase family protein molybdopterin-binding subunit
translation: MTTVLGKPLKRRDAEPKLRGDARYTDDLHLPGLLHARLVTSPYAHARIVRIDCDAARRTPGVVAVFTGHDLLPEGPEPAERARHLLARDKVIYAGQPVAIVVAESPYVAADAAALVEVEYDELPAVVDPLAAMTPEAPVIRPKELEGEWAEAGMHATVSGGEELDVRRLPANVTNAVRFQRGDVMQGFASADVVIERTYRTPFVHQAYLEPHASVAVPRPDGGVTIYTTTQGQFYCRNVTATTLGLPHEMVTIVPMEVGGGFGGKTVLLEPLVAAVALRLGRPVKLVLTRTEEFLLATPAPAAIFELRAGARRDGTLTALRARVIFDSGAYPGAPVTIALLLLGGTYRWEHLDLLGYEVLTNKPGTGAYRAPGVPQATFALEQLIDELARAIGQDPLELRLRNAARTGDLQPNGVPWPPIGLVDVLERARQHPLWRSRQRRPNEGWGIAVGGWPGGIEPCAANIRLNHDGTFTVTLGAIDITGTHTVLAMIAAEVLEQPVERIRVKLLPTDGAPYAGMSGGSKITYTVGLAVQAAAEDAKRQLLEIAANELEAAPEDLELVDGAIRVRGMPDRQITLSEIAHRSMVFGGKYAPVYGTGRSVVRQQSPGFNAQIAHVAVDPDTGEVEVLDLVAIQDVGRALNPALVEEQVHGGVGQGIGWALHEAMRWSENGQPLNPSFLDYDLPKASQLPPIAVELVEVPSPIGPFGAKGVGEPPVVPTAAAIANAIADAIGVHLSELPITPERVLAALRDKAVS
SIO_010081: TRD_RS11010
subclass of: SO_0000673
so part of: TRD_RS11010
location: complement(387529..389796)
location: region:387529-389796:-1
so has part: feature:387529-389796:-1:exon

WP_012642845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387529-389796:-1:exon

TRD_RS13905
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13905
old locus tag: trd_A0402
so part of: sequence
location: 390037..391011
location: region:390037-391011:1
so has part: feature:390037-391011:1:exon
subclass of: SO_0000010

position:390037:1
position: 390037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391011:1
position: 391011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390037-391011:1:exon

TRD_RS13905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13905
old locus tag: trd_A0402
EC number: 2.7.1.-
inference: COORDINATES: protein motif:HMM:TIGR03168.1
GO function: GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hexose kinase
translation: MSGGKIAVLCPNLGLDRIGSLGSLAPGTVMRFRSILTSAGGKGLNLARAAAALESEACVVGFLGGWIGRLVAELAGNERLRVHPYWIEAETRVNTIVLEDSGRVTVFNEEGPRLEASLASGLLDLLGSHLVEGALVVAIGSLPPGLPSTLYADCVGLARSRHLPIIVDAAREALVAVLAAEPDILAPNVFEAEGALGRASAELVTDDPAELRERSLAAARELARAVRQAAIVKAGAAGAAVATRDQLWFATAPPVVTRNPIGAGDAFAAGFAAGIARGLPLVEAVRLAVAAGSASVETLQPGALDEERVAELFAHVRVEAIGHG
SIO_010081: TRD_RS13905
subclass of: SO_0000673
so part of: TRD_RS13905
location: 390037..391011
location: region:390037-391011:1
so has part: feature:390037-391011:1:exon

WP_012643305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390037-391011:1:exon

TRD_RS11020
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11020
old locus tag: trd_A0403
so part of: sequence
location: 391349..391858
location: region:391349-391858:1
so has part: feature:391349-391858:1:exon
subclass of: SO_0000010

position:391349:1
position: 391349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391858:1
position: 391858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391349-391858:1:exon

TRD_RS11020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11020
old locus tag: trd_A0403
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRVLVVIGVLVVVFTLVVGAAQAAYGQLFYEWSASGIKPRGGLWSYSGNYLGRTDWNPLPGVNVLTRHESSVYVRNPTSDIRSPGTVLYFIHDGQVRRTVSSYAWTMTGCGAIYPPGGLVFGGCTTNSQYLGSFDSTRRAQDRGTWAFFLCDAAGCYGGVSRDRTWTL
SIO_010081: TRD_RS11020
subclass of: SO_0000673
so part of: TRD_RS11020
location: 391349..391858
location: region:391349-391858:1
so has part: feature:391349-391858:1:exon

WP_012642498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391349-391858:1:exon

TRD_RS11025
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11025
old locus tag: trd_A0404
so part of: sequence
location: 391871..392629
location: region:391871-392629:1
so has part: feature:391871-392629:1:exon
subclass of: SO_0000010

position:391871:1
position: 391871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392629:1
position: 392629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391871-392629:1:exon

TRD_RS11025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11025
old locus tag: trd_A0404
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRYRIGTIALLGLLVLVGAVALARSSGLTAPFPGIDRVESAAEAARNGDRETVLLVADKPITAAELTEMEHWVAANLAWMGEVGTRMAVTDEQRAFLERQARLIEEYGKPTVALAALIVDRTLEAEAQRQGLWPDERTVQARVERDRDLAATSDDPRIKAYLQAFGETAFWQVHYPRVVALEIAKERLYQERTKDEPDPTRRQARWLAEERALVLGAPIEVVVPERLPASIDAAVEYLKQYYDLQSSVSSTG
SIO_010081: TRD_RS11025
subclass of: SO_0000673
so part of: TRD_RS11025
location: 391871..392629
location: region:391871-392629:1
so has part: feature:391871-392629:1:exon

WP_012642378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391871-392629:1:exon

TRD_RS11035
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11035
old locus tag: trd_A0406
so part of: sequence
location: 393776..394579
location: region:393776-394579:1
so has part: feature:393776-394579:1:exon
subclass of: SO_0000010

position:393776:1
position: 393776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394579:1
position: 394579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393776-394579:1:exon

TRD_RS11035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11035
old locus tag: trd_A0406
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015626752.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mut7-C RNAse domain-containing protein
translation: MVVRAYAELNDFLPAAVRQRSFEVPLPFGATVRDLVAGLGIPPPEVDLVLVNDEPADWAVRLKDGDRVAIYPVFETIDIGSVQRLRPKPLREPRFICDVHLGRLAAYLRLLGFDTRYEREADDATLVAWAERERRIVLTRDRELLKRRAVTHGYWLRSAHPREQLLEVVRRFDLVGSLRPFVRCPRCNGLLVLVDREVARAHVPPRSWQRAQEFWRCSGCNQFYWYGTHCERVEELIAWLRSALSGEPTRLLEAACERTAGDAPSGA
SIO_010081: TRD_RS11035
subclass of: SO_0000673
so part of: TRD_RS11035
location: 393776..394579
location: region:393776-394579:1
so has part: feature:393776-394579:1:exon

WP_226980756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393776-394579:1:exon

TRD_RS11040
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11040
old locus tag: trd_A0407
so part of: sequence
location: 394933..396174
location: region:394933-396174:1
so has part: feature:394933-396174:1:exon
subclass of: SO_0000010

position:394933:1
position: 394933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396174:1
position: 396174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394933-396174:1:exon

TRD_RS11040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11040
old locus tag: trd_A0407
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011958934.1
GO function: GO:0019213 - deacetylase activity [Evidence IEA]; GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase/deacetylase family metallohydrolase
translation: MGPAERERFDTLILGGEVIDPANQRFGRFDIGIREGRIVRVARSLADAIAEQVIDARGQIVTPGLIDLHTHVYWGATYWGIEADPIAARTGVTTWLDVGSAGAYTFPGFRRYIVEPSRVRILALLNLSSIGLVAPTWEFANLDYCDLELAAAMIEANRDVILGVKARIDANTTRGVGIRPLELARELADQLGLPLMVHIGNGPPSIDEVAALLRPGDILTHCFTGGTMRILTPDGRVHPRIRELHERGLVLDIGHGAGSFSFEVAERLLAEGIVPDVISSDIHQLAIQGPMFDLPTTLSKFLALGLSLAEVIERATVRPAKIIGRPELGSLAEGTPADIALFQVVEGMFTFYDVAMQARSGDRLLVNTLTMVDGRIVPRQEPSALHPWAQLPEHQRPIVQIGHPYRVMQARGG
SIO_010081: TRD_RS11040
subclass of: SO_0000673
so part of: TRD_RS11040
location: 394933..396174
location: region:394933-396174:1
so has part: feature:394933-396174:1:exon

WP_012643272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394933-396174:1:exon

TRD_RS11045
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11045
old locus tag: trd_A0408
so part of: sequence
location: 396175..396699
location: region:396175-396699:1
so has part: feature:396175-396699:1:exon
subclass of: SO_0000010

position:396175:1
position: 396175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396699:1
position: 396699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396175-396699:1:exon

TRD_RS11045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11045
old locus tag: trd_A0408
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008477514.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: deoxyuridine 5'-triphosphate nucleotidohydrolase
translation: MSERDGVLMREQLAALLAADPPLLRDLPAVEAQLQPHGIDLTVWSVARFASAGQVGEIDEERRLPELEVVEPDRDGWWELEPGPYLVRFTETVTLPPDCMAYARPRSSLLRCGVAVHTAVWDAGYSGQGVALLVVYNPKGFRLRRCARIAQLVLHRLERPVSEGYRGMYQGERG
SIO_010081: TRD_RS11045
subclass of: SO_0000673
so part of: TRD_RS11045
location: 396175..396699
location: region:396175-396699:1
so has part: feature:396175-396699:1:exon

WP_012642960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396175-396699:1:exon

TRD_RS11050
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11050
old locus tag: trd_A0409
so part of: sequence
location: 396753..397160
location: region:396753-397160:1
so has part: feature:396753-397160:1:exon
subclass of: SO_0000010

position:396753:1
position: 396753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397160:1
position: 397160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396753-397160:1:exon

TRD_RS11050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11050
old locus tag: trd_A0409
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAERAALFLATRLPTDPKEAKRRPHPESELADQEARLRELAARECYHVTRVFSEILPEFPEQRPGLKALRTAMWLREIDVILVPSPECLYRDPERLKAFLIEARTLGERVEFLEVPPLYAWVVKEYGWPREWSR
SIO_010081: TRD_RS11050
subclass of: SO_0000673
so part of: TRD_RS11050
location: 396753..397160
location: region:396753-397160:1
so has part: feature:396753-397160:1:exon

WP_012642556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396753-397160:1:exon

TRD_RS11055
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11055
old locus tag: trd_A0410
so part of: sequence
location: 397174..397683
location: region:397174-397683:1
so has part: feature:397174-397683:1:exon
subclass of: SO_0000010

position:397174:1
position: 397174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397683:1
position: 397683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397174-397683:1:exon

TRD_RS11055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11055
old locus tag: trd_A0410
inference: COORDINATES: protein motif:HMM:NF016764.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRRIIGALRLDPTVYRELRDDPTATVPALLFVLLCVLAAGVGGLPGGGLTAFGIVAASAFVSWTIFVVAAYLFGTKALPGPETEATLGALVRTLGFALAPSLLLVFGVVPALQLVVVPLAFVWTFFATLMALRETLAVGTLRALLVAVLSYGAAALLGSILTPPGPSG
SIO_010081: TRD_RS11055
subclass of: SO_0000673
so part of: TRD_RS11055
location: 397174..397683
location: region:397174-397683:1
so has part: feature:397174-397683:1:exon

WP_012643154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397174-397683:1:exon

TRD_RS11060
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11060
old locus tag: trd_A0412
so part of: sequence
location: 397727..400210
location: region:397727-400210:1
so has part: feature:397727-400210:1:exon
subclass of: SO_0000010

position:397727:1
position: 397727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400210:1
position: 400210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397727-400210:1:exon

TRD_RS11060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11060
old locus tag: trd_A0412
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873121.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MSGAATERAAQRRVPVERLRRRLDPMTLPFQTTAEVDPVVGTVGQPRALEALEFGLEIASYGYNVYVAGRPGSGRESTVLRLVEQIAAKRATPPDWVYVHNFQDPERPVAIALPAGRGAQLARDMDEFLRAAQQAIPRAFESEEYDRRRRAIIDRLNQERERLWEGVQQFAQQLGFTVELTPAGVISLPLVQGRPLAPEEYERLPPPVREELERRNQRIQDRVADALREVRRLERETAERLRQLDREVALFAVGGLFEELRERYQDLPQVLAFLEQVREDIPEHLHDFFPPQLPGVPAPIAQLQALQQQEHLARYRVNVFVDNSQTRGAPVIFERNPSYYNLVGRIDYRATFGAMVTDFSQIRAGALHRANGGFLVVHVLDLLANPFAWDALKRALITRQVVIENLGQQYAVLPTATLRPDPIPLDVKVVLVGSPFLYYFLAAYDDDFRELFRVRADFAPDMDWNDQHVMGYAAFISRVVREQGLRHFDRSAVARVIEYGARQVEHQRKLSSQLLEIGNLVAEASYWASKAGREIVTAEDVETAIRKKRYRSDLLAERVRDLIAEGTLKIETSGARVGQINGLAVIELGDFAFGKPSRVTARVSLGRGNLISIEREIALSGPIHSKGFLILSNYLAGAYAQDFPLAITASITFEQAYEEIEGDSASSTELYALLSALSGLPIKQGIAVTGSVNQYGDVQAIGGVNEKIEGFFAVCKVQGLTGEQGVIIPTANVQHLMLDEEVIQAVAEGKFHIWAVDSVDQGIEILTGVPAGERQPDGTYPEGTVHRLVMDRLREYAERMRDFGRREEREERSERTEAADPEPAGEH
SIO_010081: TRD_RS11060
subclass of: SO_0000673
so part of: TRD_RS11060
location: 397727..400210
location: region:397727-400210:1
so has part: feature:397727-400210:1:exon

WP_012642435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397727-400210:1:exon

TRD_RS14915
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14915
old locus tag: trd_A0411
so part of: sequence
location: complement(400207..400377)
location: region:400207-400377:-1
so has part: feature:400207-400377:-1:exon
subclass of: SO_0000010

position:400207:-1
position: 400207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400377:-1
position: 400377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400207-400377:-1:exon

TRD_RS14915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14915
old locus tag: trd_A0411
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSILLLALVAAAAAILAAVVALLLRWFGIAPAEPEQRTRGIELLAERIRERLVQRR
SIO_010081: TRD_RS14915
subclass of: SO_0000673
so part of: TRD_RS14915
location: complement(400207..400377)
location: region:400207-400377:-1
so has part: feature:400207-400377:-1:exon

WP_012642756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400207-400377:-1:exon

TRD_RS11070
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11070
old locus tag: trd_A0414
so part of: sequence
location: complement(400731..402161)
location: region:400731-402161:-1
so has part: feature:400731-402161:-1:exon
subclass of: SO_0000010

position:400731:-1
position: 400731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402161:-1
position: 402161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400731-402161:-1:exon

TRD_RS11070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11070
old locus tag: trd_A0414
EC number: 2.7.2.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015940576.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate kinase
translation: MRVMKFGGTSVGNAVAIDRTARIIADAYRGDGRLVAVVSAMSGVTNQLIAAAQAAAEGDEQAAARLQQELVERHRGAAAELIPTAARLEATVSRLTELATRCARLVESVHVLRDLSPRAQDWIVSFGERMSAVLIAAVLEERGIPAVPVDSDKVIVTDDHFGSANPLLDETRARAEAILVPLLEAGKLPVVTGFFGATPKGAVTTLGRGGSDFSASILAHALDADEVWIWTDVDGVMTADPRLVPSARTLPAISFAEATELAYFGAKVIHPRTMQPAAERGIPIWIKNTFNPEHPGTRIGPDTSSNGSVVKAITAIPGVSVITVEGSGFLSVADVTARVFETVGRTGVNVFMVFQASSQHSLGFVVRRTDASKVLRALEREFELDLLKGRVARLWEEPGMAIVAVVGAGMRGTPGVAGRVFGTLGQHRINIVAIAQGSSELNISFVIREDEVARAVPAIHDAFGLGGSAGERSAGS
SIO_010081: TRD_RS11070
subclass of: SO_0000673
so part of: TRD_RS11070
location: complement(400731..402161)
location: region:400731-402161:-1
so has part: feature:400731-402161:-1:exon

WP_012642529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400731-402161:-1:exon

TRD_RS13910
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13910
old locus tag: trd_A0415
so part of: sequence
location: 402488..403798
location: region:402488-403798:1
so has part: feature:402488-403798:1:exon
subclass of: SO_0000010

position:402488:1
position: 402488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403798:1
position: 403798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402488-403798:1:exon

TRD_RS13910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13910
old locus tag: trd_A0415
inference: COORDINATES: protein motif:HMM:NF019265.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor
translation: MTSRTTLVHKQPPDLTDDELVARFRAGDREAFALLYERYVDRVYDFVARLVRDREAAADLTQETFLKAMQGLRARHVQGSLRAWLFTIARNTVIDYQRRQRTTAFSQLPSPEGEEWEPELPASGPEAEPEETARRRELAELVWQAARGLPPSDYTILELALRHDLTPAEVARVVGVRRGAINTRLSRVRDALEESFTVLLLARRGREDCPELARLLEGVVLPLGLTPELRRAVARHVDQCEICQRNRRAISAVDLLPALAPILPAPEIREKIRQSLEQALATPASAPHPVQKLQEWLRQSAWGKALAGLVAGMVVLVSAGWAYLSWGTAPVKVETRNCPPLELRLAGPAALAGRALGVPSLLAPGQPASFRLPAGEIEVQVSEREATLRLAGIPVRIRILADLAAVSWDGEDLLGQGPVQRQVARSARQAVVLVCR
SIO_010081: TRD_RS13910
subclass of: SO_0000673
so part of: TRD_RS13910
location: 402488..403798
location: region:402488-403798:1
so has part: feature:402488-403798:1:exon

WP_012642865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402488-403798:1:exon

TRD_RS14920
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14920
so part of: sequence
location: complement(404098..404430)
location: region:404098-404430:-1
so has part: feature:404098-404430:-1:exon
subclass of: SO_0000010

position:404098:-1
position: 404098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404430:-1
position: 404430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404098-404430:-1:exon

TRD_RS14920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14920
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTARSHPAVVVGGVSLPGVGVAVGVEVGVGVGVGLGVAVGVGVGAGVGLGVGVDVSVTVGDDEDDDETGESSPELTAGGVATLAGCTVATCGGETVLLPDSDGVPVVAG
SIO_010081: TRD_RS14920
subclass of: SO_0000673
so part of: TRD_RS14920
location: complement(404098..404430)
location: region:404098-404430:-1
so has part: feature:404098-404430:-1:exon

WP_169302311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404098-404430:-1:exon

TRD_RS11085
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11085
so part of: sequence
location: complement(404575..404760)
location: region:404575-404760:-1
so has part: feature:404575-404760:-1:exon
subclass of: SO_0000010

position:404575:-1
position: 404575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404760:-1
position: 404760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404575-404760:-1:exon

TRD_RS11085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11085
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVFASAPFATVAQSCADPPDNVAIVWKPTWYMVPGGLPGIVPAAVQVVPLQLQLAVPLYS
SIO_010081: TRD_RS11085
subclass of: SO_0000673
so part of: TRD_RS11085
location: complement(404575..404760)
location: region:404575-404760:-1
so has part: feature:404575-404760:-1:exon

WP_143714784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404575-404760:-1:exon

TRD_RS15000
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS15000
old locus tag: trd_A0417
so part of: sequence
location: 404964..406397
location: region:404964-406397:1
so has part: feature:404964-406397:1:exon
subclass of: SO_0000010

position:404964:1
position: 404964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406397:1
position: 406397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404964-406397:1:exon

TRD_RS15000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS15000
old locus tag: trd_A0417
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: autotransporter
translation: MRQRFRILLVLVVAAALVLGACSGSLLGNPTPVPSPIAGIVCPPGTVGSTLSVGPGQSLTPRPQMLVGWAPSFIYTSTLPSPSTANSGSPKYVLHSFLNVPGAGTIVAGSVTAWMRPLVDNANDRISVLDPLGGVGSSYPQSLLVPSVAAPWTTANYPTFVPITMQLTSTTLNLLNANGFLDIVVGPTAQVQSLNLTVCVPLPTPTPTKTPLALTPSGVGTVTGPSTALDGGAAPTPTPKPSPVGTIVVGGNPTCIPGDECWPTPTPTVVKKPTIALPTIVLPTPTPTVVKKPTIVANVTPITLPTPTSTPTATPSPTPTPTPTATPSPTPTPTPTPTPTPTATPTPVPTPTPLAACDMAVDKVMQPTGQPNVYTVVVVVSNVGSGPCPAGTQAVDNPGANITLSGPLTITQTGGTVSWNCVGFACTAQNPIPPGYVAQFSFTATVNQKPATNCVRVTVPQSADVNINNNYYCVTVQ
SIO_010081: TRD_RS15000
subclass of: SO_0000673
so part of: TRD_RS15000
location: 404964..406397
location: region:404964-406397:1
so has part: feature:404964-406397:1:exon

WP_143714785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404964-406397:1:exon

TRD_RS11100
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11100
old locus tag: trd_A0418
so part of: sequence
location: 406543..407733
location: region:406543-407733:1
so has part: feature:406543-407733:1:exon
subclass of: SO_0000010

position:406543:1
position: 406543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407733:1
position: 407733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406543-407733:1:exon

TRD_RS11100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11100
old locus tag: trd_A0418
inference: COORDINATES: protein motif:HMM:NF013508.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF11 domain-containing protein
translation: MRTTTRAGCRSKTAVIVLVAVAWLLAACEGTLVPLVTPSPLAERGVTPSPAVPSSPVPPSPPLVQASPTAIVSTPAVPSETATAEATPALVPTVTVRPAPTVASRPTSPAPSTGTPILTRPVVGEPGETPTPVGTCDLALDKTVSPLAVGRTVVVTLTVQQRGTAVCPTGALVSDPLPAGFQQESTIRIVETGGTGAWQCDGTTCRAGEPLPPGYSATFTFTVSGEPGSAAENCALVSVASDADPANDARCVTLGPFPTPPVAPTPSPVACLFGFEKAIRLGGPITGGQTGSATVTIRIRNAGPEECTVRWPEFVVVDVLPAGMSLSGAVRLNVAAWSCGTSERAFQCSGPPPQPGSEVIVTVDVAVAAEAERAVNCATLDPVGAQACAVPSYSRG
SIO_010081: TRD_RS11100
subclass of: SO_0000673
so part of: TRD_RS11100
location: 406543..407733
location: region:406543-407733:1
so has part: feature:406543-407733:1:exon

WP_012642641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406543-407733:1:exon

TRD_RS11105
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11105
old locus tag: trd_A0420
so part of: sequence
location: 408227..408409
location: region:408227-408409:1
so has part: feature:408227-408409:1:exon
subclass of: SO_0000010

position:408227:1
position: 408227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408409:1
position: 408409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408227-408409:1:exon

TRD_RS11105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11105
old locus tag: trd_A0420
inference: COORDINATES: protein motif:HMM:TIGR02174.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rdx family protein
translation: MELLLDKYELQIGEIALVPSSGGRFEVTVDGELVFSKLAQKRFPEDEELIELVGARISAN
SIO_010081: TRD_RS11105
subclass of: SO_0000673
so part of: TRD_RS11105
location: 408227..408409
location: region:408227-408409:1
so has part: feature:408227-408409:1:exon

WP_012642931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408227-408409:1:exon

TRD_RS11110
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: thiI
locus tag: TRD_RS11110
old locus tag: trd_A0421
so part of: sequence
location: 408461..409684
location: region:408461-409684:1
so has part: feature:408461-409684:1:exon
subclass of: SO_0000010

position:408461:1
position: 408461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409684:1
position: 409684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408461-409684:1:exon

TRD_RS11110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: thiI
locus tag: TRD_RS11110
old locus tag: trd_A0421
EC number: 2.8.1.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873128.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA 4-thiouridine(8) synthase ThiI
translation: MSERFTPLVIVRVHELALKGQNRPFFKRALYENLSYALRDLPVSRIQERALRFIVRLTDPAAWPEVSERLRWVFGVANFSLGLETALTVEAMERGLHELLDRYGPPQGSFRIRVKRTNKSFPLTSPELERELGRLVQKRTGAPVDLSEPDVTYTVEVLYDRALVSGDALPGPGGLPIGVSGRVVALLSGGFDSPVAAYRLMKRGCFVTFVHFHAYPYVRPISIEKAVELARHLSRFQPPKNRLIVVPIGDAQRVIALAAEPSLRVVLYRRLMLRIATAIAHEEGAGALVTGESLGQVASQTLENMRAIGAVTDLPLLRPLVGNNKDEIIAEAVRIGTEPISRVPDDDCCTVFVPLHPATRVTVEQAEAAEQAYDVAALVEQCLARRTVYEGDPFRWDPLMALAAATA
SIO_010081: TRD_RS11110
subclass of: SO_0000673
so part of: TRD_RS11110
location: 408461..409684
location: region:408461-409684:1
so has part: feature:408461-409684:1:exon

WP_012642758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408461-409684:1:exon

TRD_RS11115
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11115
so part of: sequence
location: complement(409624..410475)
location: region:409624-410475:-1
so has part: feature:409624-410475:-1:exon
subclass of: SO_0000010

position:409624:-1
position: 409624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410475:-1
position: 410475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409624-410475:-1:exon

TRD_RS11115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016871589.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PrsW family intramembrane metalloprotease
translation: MQAIRSTLTHGWIQVLFGGLILFYALNNVYQATGNPNFVPSLLVLGAFLVPVVLVLWVYEHPLPERIPPSAVAWNFLWGGALGVIVAGMLEYDTYRTLGFLPLLAVGLIEEAAKLIAPLVFFLRWRYRSEMAGLLFGLASGMGFAALETLGYAFTALIASRGNVELAEFVLLVRGFLSPAGHAAWTALVTATLWRERVHHGHAGLTRATLGAYLLAVALHTLWDTFQIKSSVTRVDWLSIEVLSALVALSSVTLLARRYREARRQAVAAASAMSGSQRNGSPS
SIO_010081: TRD_RS11115
subclass of: SO_0000673
so part of: TRD_RS11115
location: complement(409624..410475)
location: region:409624-410475:-1
so has part: feature:409624-410475:-1:exon

WP_226980757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409624-410475:-1:exon

TRD_RS11120
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11120
old locus tag: trd_A0423
so part of: sequence
location: complement(410708..410983)
location: region:410708-410983:-1
so has part: feature:410708-410983:-1:exon
subclass of: SO_0000010

position:410708:-1
position: 410708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410983:-1
position: 410983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410708-410983:-1:exon

TRD_RS11120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11120
old locus tag: trd_A0423
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKLAARLLDQLKKHRFRPVMLSGDGYVLEIVPYHGKIEAGFTLWRLEGGELVPVASGHTENGHLLTAEGFALQLPADVERTMLTLLSRKR
SIO_010081: TRD_RS11120
subclass of: SO_0000673
so part of: TRD_RS11120
location: complement(410708..410983)
location: region:410708-410983:-1
so has part: feature:410708-410983:-1:exon

WP_012643129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410708-410983:-1:exon

TRD_RS11125
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11125
old locus tag: trd_A0425
so part of: sequence
location: complement(411196..412803)
location: region:411196-412803:-1
so has part: feature:411196-412803:-1:exon
subclass of: SO_0000010

position:411196:-1
position: 411196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412803:-1
position: 412803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411196-412803:-1:exon

TRD_RS11125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11125
old locus tag: trd_A0425
inference: COORDINATES: protein motif:HMM:NF013324.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flotillin family protein
translation: MNFPLPDVFQALFAILLVFLAFAALLAIVSRNIIKVPPNMVAVFSGRRRTIVDPTTGERRTVGYRLIKGGSSIRIPIVERVDFLSLNVMTIPLKIASAYTKEGVPVSVDAVANVKIGSDDQMLMNAIERFLGMEQDQIRSVIFQTLEGHLRSILGTLTVEQINADRQAFAQRLAAESAQDLSRMGIEIDVLTIQQISDPQGYLDALGQRRTAEVKRDAEVGKAEAERDARVRRAQALQQAAIAEAMAEAEIAAAQKEAEVRKARYEAEVQAERARAAQAGPLAEAEARRQVVVAEQQVELARTEAAIAVQETEARRREKELEATVLKSAEAERRATIIRAEAEREATILRAEGERQAQVVRAEAEARERELVGTGEAARIRQIGQAEAEAKKALAEALQAELFAQAEGQRAALLAEADGKRALADALNHYGPIAMQLLMYQAFVEQLPRIVEAAARPLAQVERVVVFDSGAAGDGTSALGRYATQLPVIVQQLVEGFSAVTGVDLTTAVRDRLAATPAADGAASDPPGPDPASTT
SIO_010081: TRD_RS11125
subclass of: SO_0000673
so part of: TRD_RS11125
location: complement(411196..412803)
location: region:411196-412803:-1
so has part: feature:411196-412803:-1:exon

WP_012642456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411196-412803:-1:exon

TRD_RS13915
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13915
old locus tag: trd_A0426
so part of: sequence
location: complement(412800..413354)
location: region:412800-413354:-1
so has part: feature:412800-413354:-1:exon
subclass of: SO_0000010

position:412800:-1
position: 412800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413354:-1
position: 413354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412800-413354:-1:exon

TRD_RS13915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13915
old locus tag: trd_A0426
inference: COORDINATES: protein motif:HMM:NF014062.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NfeD family protein
translation: MSLLAITYLVIALVGLAFLALTVLIGEIADIFDVGDDGIGPFNGKVIAVALTAFGATGLLMTFFRVPVLWGALAAAGSGLAFGLAAWLLVALLYRQQATTEFSLQDLLGRTGEVTVPIAADQPGYVVISGPTGTRQYLARSSRGIPIPAGQLVRVSGLAGTVLLVEPLQQATAVEGRDARGESR
SIO_010081: TRD_RS13915
subclass of: SO_0000673
so part of: TRD_RS13915
location: complement(412800..413354)
location: region:412800-413354:-1
so has part: feature:412800-413354:-1:exon

WP_012642840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412800-413354:-1:exon

TRD_RS11135
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: eat
locus tag: TRD_RS11135
old locus tag: trd_A0428
so part of: sequence
location: complement(413652..415190)
location: region:413652-415190:-1
so has part: feature:413652-415190:-1:exon
subclass of: SO_0000010

position:413652:-1
position: 413652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415190:-1
position: 415190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413652-415190:-1:exon

TRD_RS11135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: eat
locus tag: TRD_RS11135
old locus tag: trd_A0428
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012627417.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015171 - amino acid transmembrane transporter activity [Evidence IEA]
GO process: GO:0006865 - amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ethanolamine permease
translation: MGEQPTIERGGVRYERVGQEYLEQRKLRRHANWVLLWALGVGAVISGDFFGWNFGLSAGGFGGLLIATVLMALMYLFMVYSIAELTTALPHAGGFYSFTRSAFGPWGGYLVGVTDTIEYVITPAVIVVGIGGYMNTLFPQVPVWLWWLLFYMVFVAINIAGVEITLRVGLVVTILAMLILVIFYIGAVASGAFSWDLVFNIEPNPDRAGSSTFLPQGFFGIFAAIPFAIWFYLAIEELPLAAEETHDVVRDMPKGLITGIFTLLALSVFTLVFNSGVNGGAKQIGESSAPLADGFQAVFGAGATTTVLTLIALTGLIASFHTIIYAYGRVIFALSRAGYYPRFLSVTSPKTHTPHRALIAGAIIGLLCAVIIDQFGTGIVGAALLNMAVFGAVISYAAVMLAYIRLKITRPDLPRPYKSPFGIPGAAIGAALAILALFATFSIQDYRPGVLGVAFFLVIALLYFALYSRHRLVAQAPEEEVALILEAEKELKHQYVELESEEERRRMEEQAR
SIO_010081: TRD_RS11135
subclass of: SO_0000673
so part of: TRD_RS11135
location: complement(413652..415190)
location: region:413652-415190:-1
so has part: feature:413652-415190:-1:exon

WP_012643070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413652-415190:-1:exon

TRD_RS11140
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11140
old locus tag: trd_A0429
so part of: sequence
location: complement(415221..416003)
location: region:415221-416003:-1
so has part: feature:415221-416003:-1:exon
subclass of: SO_0000010

position:415221:-1
position: 415221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416003:-1
position: 416003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415221-416003:-1:exon

TRD_RS11140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11140
old locus tag: trd_A0429
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018051558.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MGNRLAGKVCIITGAGSGIGREAAILFAQEGGKVVVADVNVAGGEETVRLIREAGGEAIFVRTDVTKAAEVEALVRTAEDTYGKLDVMFNNAGIFPDEDGSVVDTPEEVWDRVMAVNLKGVFLGCKYAIPAMLRAGGGSIINTASFVALMGAAVPQIAYTASKGGVLAMTREIAIEFARKNIRANALCPGPVDTPLLRSILSDPAKRQRRLVHIPMGRFAQAREVAQAALFLASDESSYVTATAFLVDGGITAAYITPEE
SIO_010081: TRD_RS11140
subclass of: SO_0000673
so part of: TRD_RS11140
location: complement(415221..416003)
location: region:415221-416003:-1
so has part: feature:415221-416003:-1:exon

WP_012642487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415221-416003:-1:exon

TRD_RS11145
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11145
old locus tag: trd_A0430
so part of: sequence
location: complement(416018..417403)
location: region:416018-417403:-1
so has part: feature:416018-417403:-1:exon
subclass of: SO_0000010

position:416018:-1
position: 416018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417403:-1
position: 417403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416018-417403:-1:exon

TRD_RS11145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11145
old locus tag: trd_A0430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015901602.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine synthetase family protein
translation: MSEHTTGLLTLDELEHLVASGEIDTVINALCDMQGRLMGKRVRADFFLEHVRAHGTHFCTYLLGTDMEMTTPGGYRLMNWETGYGDWVARPDFATLRRIPWLEGTALVLADAVDEETGELIPVAPRTILRRQVERAAAMGFRIMMASELEFYLLKDSYDEAYEKGYRGLHPYGWYNEDYHLFQGTKAEPIYRQIRNLMTAAGIPIEFSKGEAAAGQHEINIHYAEALESADRAVLFKHGVKEIAYLNGVAVTFMAKPHHTWTGSSSHIHLSIWDSAGERNLFYEADGQPYHMSKLMQHALAGLIAHARELSLFVASNVNSYKRYAVASWAPVNVVWGRDNRTCGFRIVGHGQSLRVESRLPGADANPYLAYAAMIAAALDGIERELPLPPEYRGNAYEARDVVRVPRTLAEAMVEFERSELARRAFGELVVEHYVNMARVEQETFDAVVTDWELYRYFERG
SIO_010081: TRD_RS11145
subclass of: SO_0000673
so part of: TRD_RS11145
location: complement(416018..417403)
location: region:416018-417403:-1
so has part: feature:416018-417403:-1:exon

WP_012642857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416018-417403:-1:exon

TRD_RS11150
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11150
old locus tag: trd_A0432
so part of: sequence
location: 417879..419369
location: region:417879-419369:1
so has part: feature:417879-419369:1:exon
subclass of: SO_0000010

position:417879:1
position: 417879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419369:1
position: 419369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417879-419369:1:exon

TRD_RS11150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11150
old locus tag: trd_A0432
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAEPEEVAEPIERQRAGRWLLVVVLVAAVAWALIAFRYLERLAPLTGDEPYYVMTVISLLEDFDLDEANQYAERAWLRFYPPRPLPADWRGWPAFPWELPPHPAQAARPGLYSKHGLGLTVLIALPWAVAGRVGAMATVGACGILLLVQLFWLAREVGASPRLAALLALGLGLVMPIGPYALLLFPEVPAALCFVYAVRRASERANRWWQWLLAGGAIGFLPWLHQRFLISAALLGAVILGRAVAARAGRGWGADWPGALWGVLPALVGGLGILGFDLWLYGKPYQNPADHAGFAGPLGTLNGAFGLLLDAQWGLLIAAPVFLVALATLHWWAARQPQRFWLTVGVVAPYLGLVAAYRVWWGEWGPPARYLVPVAGFAVAPLACWLVTARPWQWLIAGLAWSWGALLSVVGYLDPQRFYHHPDGVNKLYRTLDSWLGTQLAERLVPFQPYAAAPAEERLRAALLTVIALLALVALAGPPAWQRVCILTDEKAQRVG
SIO_010081: TRD_RS11150
subclass of: SO_0000673
so part of: TRD_RS11150
location: 417879..419369
location: region:417879-419369:1
so has part: feature:417879-419369:1:exon

WP_041437297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417879-419369:1:exon

TRD_RS11155
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11155
old locus tag: trd_A0433
so part of: sequence
location: 419399..419803
location: region:419399-419803:1
so has part: feature:419399-419803:1:exon
subclass of: SO_0000010

position:419399:1
position: 419399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419803:1
position: 419803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419399-419803:1:exon

TRD_RS11155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11155
old locus tag: trd_A0433
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVQWWRGRRFQPKEKVSEPRTPGAWVLTVRSAPLRYDELRQLVESTGEARVYFGEALAYLQGEAVALLRIEATGFEWVRRLYDWWQVAQLRDAVPFDVRFYVRDREFVGSFREDQLQELLARLVERAPRVERAA
SIO_010081: TRD_RS11155
subclass of: SO_0000673
so part of: TRD_RS11155
location: 419399..419803
location: region:419399-419803:1
so has part: feature:419399-419803:1:exon

WP_012643255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419399-419803:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 309801
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01786
inference: COORDINATES: profile:INFERNAL:1.1.4
note: cyclic di-GMP riboswitch class II; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: cyclic di-GMP
so part of: sequence
location: 419946..420032
location: region:419946-420032:1
so has part: feature:419946-420032:1:region

position:419946:1
position: 419946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420032:1
position: 420032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419946-420032:1:region

TRD_RS15005
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS15005
old locus tag: trd_A0435
so part of: sequence
location: 420122..421216
location: region:420122-421216:1
so has part: feature:420122-421216:1:exon
subclass of: SO_0000010

position:420122:1
position: 420122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421216:1
position: 421216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420122-421216:1:exon

TRD_RS15005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS15005
old locus tag: trd_A0435
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRQTNQNGKPRSTITWVATFLSLALLVASLALALGSGEAVAKPSKTPTPTPTATPTPSGTKPISIKASHQNYQKSCKKDEEIEWHFVITQIANSSLAPGSITAQFQNAGTVTIGLDKFTGGTAHYTYYTSSPETLIDAWATIYAGWDGQFNLSHAKCVRSTSTPTQVTTPVGTPEPTATPTPEPTATPTPTPTPTATPTQVTTPVGTPEPTATPTPTPTPTATPTQVTTPVGTPEPTRTPPRATPTPPRATPTPVTTPVGSPEPTRTPPRATPTPPRATPSPVTTPASESAGATATPTSVSEALPATAEPTQTPQPPAAAGQVLPKTGGGPGGSILVGLLGLAGSVLAATGFALEARRRRAMR
SIO_010081: TRD_RS15005
subclass of: SO_0000673
so part of: TRD_RS15005
location: 420122..421216
location: region:420122-421216:1
so has part: feature:420122-421216:1:exon

WP_041437299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420122-421216:1:exon

TRD_RS11165
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11165
old locus tag: trd_A0437
so part of: sequence
location: 421438..422358
location: region:421438-422358:1
so has part: feature:421438-422358:1:exon
subclass of: SO_0000010

position:421438:1
position: 421438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422358:1
position: 422358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421438-422358:1:exon

TRD_RS11165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11165
old locus tag: trd_A0437
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873089.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EamA family transporter
translation: MTRGQLVQLVLLGTIWGSSYLFIKLAVAGIPPLALVEGRLLLGALVLLAVRWVTRQPWPSRAVWLHLALMAVIGNVVPFLLIAWSEQHIDSGLASVLNATTPFFTVLFAVLIFRAERLTQAKAIGLTLGFLGVAVLSGADLAAVGAASTQGQLAVLASSACYGLGFAYARRFLRGAPLALAAGQIALAALILLPPALATEDLAALRPGPVEILSLLALGVASSGLAYVLYYRLIAAAGAVIASLATYLMPPVGVTLGWLVLGEPVGWRLLVGIILILLGMAVVQGRAGWSAWRGRTARASTLLADD
SIO_010081: TRD_RS11165
subclass of: SO_0000673
so part of: TRD_RS11165
location: 421438..422358
location: region:421438-422358:1
so has part: feature:421438-422358:1:exon

WP_041437665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421438-422358:1:exon

TRD_RS11170
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: map
locus tag: TRD_RS11170
old locus tag: trd_A0436
so part of: sequence
location: complement(422355..423098)
location: region:422355-423098:-1
so has part: feature:422355-423098:-1:exon
subclass of: SO_0000010

position:422355:-1
position: 422355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423098:-1
position: 423098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422355-423098:-1:exon

TRD_RS11170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: map
locus tag: TRD_RS11170
old locus tag: trd_A0436
EC number: 3.4.11.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873088.1
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I methionyl aminopeptidase
translation: MVLKRPEQIRLMREAGKIVAEVLATLAETVRPGITTAELDRIAERIIRRHGAVPSFKGYRGFPASICVSVNEEVVHGIPGSRMLAEGDIVGIDVGARYRGYHGDATITVPVGRVSPEAEKLLRVCREALEIGIAQAHAGRRLTDISHAIQQHVEAHGFSVIRNLYGHGIGRSLHEEPMLPHYGPPGQGPLLRPGMVITIEPMIAAGRPETRVLPDRWTVVTADGSLSAQFEHTVAITENGPEILTLP
SIO_010081: TRD_RS11170
subclass of: SO_0000673
so part of: TRD_RS11170
location: complement(422355..423098)
location: region:422355-423098:-1
so has part: feature:422355-423098:-1:exon

WP_041437667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422355-423098:-1:exon

TRD_RS15010
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS15010
old locus tag: trd_A0438
so part of: sequence
location: 423347..423871
location: region:423347-423871:1
so has part: feature:423347-423871:1:exon
subclass of: SO_0000010

position:423347:1
position: 423347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423871:1
position: 423871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423347-423871:1:exon

TRD_RS15010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS15010
old locus tag: trd_A0438
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873087.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CHRD domain-containing protein
translation: MQLFGRAMVLVLVALAVFALPVVAQESVTIPLGEQSGSGQSGTAVLTAMGNQTRVVVTLSNPPAGVAQPAHIHEGTCANLNPKPRYPLQSLMDGRSETVVDVPLTDLLAGQFAINVHKSQQEISTYVACGEIRAQVAPATGAGPHALPGWSIAAALLSGLLFVASGFGLRLVRR
SIO_010081: TRD_RS15010
subclass of: SO_0000673
so part of: TRD_RS15010
location: 423347..423871
location: region:423347-423871:1
so has part: feature:423347-423871:1:exon

WP_012642595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423347-423871:1:exon

TRD_RS13920
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13920
old locus tag: trd_A0439
so part of: sequence
location: 423885..424385
location: region:423885-424385:1
so has part: feature:423885-424385:1:exon
subclass of: SO_0000010

position:423885:1
position: 423885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424385:1
position: 424385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423885-424385:1:exon

TRD_RS13920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13920
old locus tag: trd_A0439
inference: COORDINATES: protein motif:HMM:NF024864.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupredoxin domain-containing protein
translation: MRRSWPIVAVLAVLLVAGCGGRPNSGTVPSGASGSGYGGPYDYGPGYATSVPTPAAAASPSAPQALSPAPGAAAPTAIPTVAEGGTVEIAVVNFGFQPAEVTVAASTTVVWRNVSPTTHTVAAKNRSFESEFIEPGGSYSVTLREPGVYDYECTLHPEMLGRIIVR
SIO_010081: TRD_RS13920
subclass of: SO_0000673
so part of: TRD_RS13920
location: 423885..424385
location: region:423885-424385:1
so has part: feature:423885-424385:1:exon

WP_012642713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423885-424385:1:exon

TRD_RS11185
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11185
old locus tag: trd_A0440
so part of: sequence
location: 424568..425116
location: region:424568-425116:1
so has part: feature:424568-425116:1:exon
subclass of: SO_0000010

position:424568:1
position: 424568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425116:1
position: 425116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424568-425116:1:exon

TRD_RS11185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11185
old locus tag: trd_A0440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGRLLGCTTTLVVGLVVVLAAAAFLTREPARAPVEEAGARSSVAAAPSSEVPSGQDTSPVAGNRRVRVTEEELNRWLAEHAAELRPASDPQAEIDVDGIALHVRIYGWGATYRARPVVRDGRLVLEDGRIEGPLGLGMGAESVTARLQAALDERLARAGLRPVAAELQPGTLTVEFEPVEG
SIO_010081: TRD_RS11185
subclass of: SO_0000673
so part of: TRD_RS11185
location: 424568..425116
location: region:424568-425116:1
so has part: feature:424568-425116:1:exon

WP_012642659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424568-425116:1:exon

TRD_RS11190
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11190
old locus tag: trd_A0441
so part of: sequence
location: 425113..425526
location: region:425113-425526:1
so has part: feature:425113-425526:1:exon
subclass of: SO_0000010

position:425113:1
position: 425113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425526:1
position: 425526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425113-425526:1:exon

TRD_RS11190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11190
old locus tag: trd_A0441
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nuclear transport factor 2 family protein
translation: MKAGGQASDPVAVVRAVLAALNRGDLETALGYCADDIVLWAPGPTPSGTELRGKQALRAFLEASEATWPDSWAAVRTLVADGDEVAVELVATATHAGDRVTQPMAAFFTVRDGLIVRQACYFDLAGLLAHLRERGLA
SIO_010081: TRD_RS11190
subclass of: SO_0000673
so part of: TRD_RS11190
location: 425113..425526
location: region:425113-425526:1
so has part: feature:425113-425526:1:exon

WP_012642780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425113-425526:1:exon

TRD_RS11195
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: ftsH
locus tag: TRD_RS11195
old locus tag: trd_A0442
so part of: sequence
location: 426037..428004
location: region:426037-428004:1
so has part: feature:426037-428004:1:exon
subclass of: SO_0000010

position:426037:1
position: 426037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428004:1
position: 428004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426037-428004:1:exon

TRD_RS11195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: ftsH
locus tag: TRD_RS11195
old locus tag: trd_A0442
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012642903.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent zinc metalloprotease FtsH
translation: MDERNRTPREQRERSTNPFGKALRGIFGSRFGLLWIIVGLILFYNLYAVFRPERSGPQSEIAYSSFVAAVEKGLVSTVTLSGQTIDGQFTQPLRVANGIVYLPGEPLPDTVDPAQVRSVTRFRTVIPENTQAEVTAFLQQHNVLLKVQPSGGASLPGLLLSVLPFVFLIGLLFLLGRNLSRGQQNVFSFGRSRARVYDVERPQVTFADVAGEEEAKAELAQVVDFLKNPAKYHRIGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGVGASRVRDLFERAKAQAPSIIFIDELDAVGRQRFAGLGVGNDEREQTLNQLLVEMDGFEAHTDVVVIAATNRPDVLDPALLRPGRFDRQVVVGLPDKRGRAAILRIHTRGIPIAPDVDLEGLAAATPGFSGADLANLVNEAALVAARRGKQVVDRSDFEEALDKMLLGTTRSLLMSQEERRLVAYHEAGHAVVAYFTPGADPLRKISIVPRGRALGVTVQAPEEDRFNYTRNQLLGRLAVLLGGRAAEQLVFHEVTTGAQNDLKEATQLARRMVGLWGMSEELGPIYLGLGEQHVFLGREIVQDHSIGTSTLDRADQAVQRLLNEAMERAERILREHREELDRLADLLIAEETVGPEKIREVLGEQPVAAGDD
SIO_010081: TRD_RS11195
subclass of: SO_0000673
so part of: TRD_RS11195
location: 426037..428004
location: region:426037-428004:1
so has part: feature:426037-428004:1:exon

WP_226980758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426037-428004:1:exon

TRD_RS11200
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11200
old locus tag: trd_A0443
so part of: sequence
location: 428116..428823
location: region:428116-428823:1
so has part: feature:428116-428823:1:exon
subclass of: SO_0000010

position:428116:1
position: 428116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428823:1
position: 428823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428116-428823:1:exon

TRD_RS11200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11200
old locus tag: trd_A0443
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012628618.1
GO process: GO:1990397 - queuosine salvage [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: queuosine precursor transporter
translation: MRSRHIPVELGPGQYSRWFVVITAVFVTTLIVSNIVAVKIVDVWGLYVPAGTVTVFPLAYIFGDVLTEVYGYRRARLVIWLGFACNLLAVAAFAATQYLPAAPFWDGQAAYERILGYTPRLLAASFLAYLVGEFANAAVLSRLKLMTHGRFLWVRTIGSTLVGQGLDSLVFVTVAFFGTLAGPDLIRTMVTAWLVKSAYEALATPLTYLVVNGLKRVEGVDAYDYGVSLSPFRLD
SIO_010081: TRD_RS11200
subclass of: SO_0000673
so part of: TRD_RS11200
location: 428116..428823
location: region:428116-428823:1
so has part: feature:428116-428823:1:exon

WP_052294158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428116-428823:1:exon

TRD_RS11205
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11205
old locus tag: trd_A0444
so part of: sequence
location: complement(428878..430839)
location: region:428878-430839:-1
so has part: feature:428878-430839:-1:exon
subclass of: SO_0000010

position:428878:-1
position: 428878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430839:-1
position: 430839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428878-430839:-1:exon

TRD_RS11205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11205
old locus tag: trd_A0444
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015941497.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PhoX family phosphatase
translation: MARRAVLPLSPALAAWLAKCQWACGSKCFTEPVNPSENPTFENVLAQRLSRRDLLGGAAAVALVLAVGRHESAEASQRGRLTFRPITLNTRDEVTVPEGYASGVVIRWGDPLQSWGPEFRFGEQSPERQAQQFGYNCDFVGLFLLPGGAASGSRGLLAVNHEYTNPELMFPGYREGDPEAWQVAVELEAHGVTIVEVLQRGRGQWHYLPGSSYNRRITGTTRCELTGPAAGSDWMKTSTDSTGTVVYGTLNNCAGGKTPWGTLLTCEENFHQYFGNLSALSSTDPRYTVHQRYGIPSGASERRWERFDRRFDVSKEPNEPFRFGWVVEIDPYDPTFVPKKRTALGRFKHEAATVVIARDGRAVVYSGDDERFEYIYKFVSEGRYNPRDRRANFSLLDSGTLYVARFNADGTGEWLPLVHGQGPLTEANGFRSQADVLVNTRRAADLLGATKMDRPEDIETNPVNGRVYIVCTNNARRKWNQIDPANPRGDNRHGHIIELIENGDAAATRFRWEIFLLCGDPANPDDGVFAAGFDPSLISPISCPDNITFDAWGNMWIATDGQPGTFRRNDGIYAVPTSGNERGFVRMFLSGPRGCEICGPEFAPDFHTLFCAIQHPGEGGTLSAPLSSWPDGTVPRPSVIVVWKDRGDPRIGS
SIO_010081: TRD_RS11205
subclass of: SO_0000673
so part of: TRD_RS11205
location: complement(428878..430839)
location: region:428878-430839:-1
so has part: feature:428878-430839:-1:exon

WP_012643000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428878-430839:-1:exon

TRD_RS11210
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: fabD
locus tag: TRD_RS11210
old locus tag: trd_A0446
so part of: sequence
location: 431176..432126
location: region:431176-432126:1
so has part: feature:431176-432126:1:exon
subclass of: SO_0000010

position:431176:1
position: 431176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432126:1
position: 432126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431176-432126:1:exon

TRD_RS11210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: fabD
locus tag: TRD_RS11210
old locus tag: trd_A0446
EC number: 2.3.1.39
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873103.1
GO function: GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ACP S-malonyltransferase
translation: MELGQLLQKRVGLLFPGQGSQHVGMGQRVHQLSEAARRIFVQAEEILGLPLRRLCFEGPAEELADTANAQPAILTVSLAYLEALRERLRELGASLQPSMVAGHSLGEFTALVAANALRFEDALRLVRERGRLMREVSQERPGGMAAVIGLERDALEEVCREASELGLVVVANDNSPGQLVISGEEQALQRAMELAQRRGAKRVVRLGVMVASHSPLMERVAHALAEMLARIPLREPEIPIVANVTGRILSTVEEIRRELACQVAQPVQWTTSVREMTNRGVTTFLEVGPGQVLTGLVKKIQRDVEAYSMRDLGLES
SIO_010081: TRD_RS11210
subclass of: SO_0000673
so part of: TRD_RS11210
location: 431176..432126
location: region:431176-432126:1
so has part: feature:431176-432126:1:exon

WP_012642458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431176-432126:1:exon

TRD_RS11215
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: fabF
locus tag: TRD_RS11215
old locus tag: trd_A0447
so part of: sequence
location: 432148..433395
location: region:432148-433395:1
so has part: feature:432148-433395:1:exon
subclass of: SO_0000010

position:432148:1
position: 432148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433395:1
position: 433395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432148-433395:1:exon

TRD_RS11215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: fabF
locus tag: TRD_RS11215
old locus tag: trd_A0447
EC number: 2.3.1.179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012301766.1
GO function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl-ACP synthase II
translation: MHRVVVTGLGAITPLGLDVPTFWRRLLAGESGIDRIQHFDASNLEVQIAGEVKGFDPRDFMDFKAARRMDRFSQFAVAAAREAIRDAGLEITRENADRIGVMINTGGGGIQTMEREVVTFYQRGPSRVSPFFVPMFAPNMAACQVSIVYGITGPIMSSVAACAAGTQAFVDALRMLRLGEADVMIAGGTEAGLTPVAVTAFANMGALSRRNEEPQRASRPFDKDRDGFVFGEGCAVMVLETEEHARRRGARIYCELAGGAVTGDAYHVSAPDPDGLGAARAMRLALRDAGMGPDDVDYICAHGTSTPLNDVTETKAIKAVFGDYAYRVAISSPKSMIGHLVGAAGAVSGVVCALAIRDGIVPPTINLEHPDPECDLDYVPNVARRMPVRVAIANAFGFGGQNAVAVFRAYDGAAR
SIO_010081: TRD_RS11215
subclass of: SO_0000673
so part of: TRD_RS11215
location: 432148..433395
location: region:432148-433395:1
so has part: feature:432148-433395:1:exon

WP_012642981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432148-433395:1:exon

TRD_RS11220
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: mutL
locus tag: TRD_RS11220
old locus tag: trd_A0448
so part of: sequence
location: complement(433436..435166)
location: region:433436-435166:-1
so has part: feature:433436-435166:-1:exon
subclass of: SO_0000010

position:433436:-1
position: 433436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435166:-1
position: 435166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433436-435166:-1:exon

TRD_RS11220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: mutL
locus tag: TRD_RS11220
old locus tag: trd_A0448
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871302.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006298 - mismatch repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch repair endonuclease MutL
translation: MQVARPPRRPIRVLPPNVAARIAAGEVIERPASVVKELVENALDAGASRIRISVRGGGLHEIRVSDDGCGIPADELPLALQRHATSKLAEDDLERIETLGFRGEALPSIAAVAELTIASATSDAPVGRQLTVRGGRILADEPIAHPPGTTVTVRHLFEDLPARLAHVRNTRAEMAEIARVVQRLAIAAPHVRIALRIEDRVVLQTTGSGDRRVVLSELYGPTLASSLLPFGPLKIGDCSCSGFVSSPDLTRSSRRHLHVVVNGRWAQSRTVLALLEAAYQPLLPRGRHPVLVLVITADPAAVDVNIHPAKLEVRLRAERELGQAIAEEVRSLLARTPRRFTFLEATPAIDPVRAAIAETPRPYDRPETEEPILTPAFPPLRLIGQVRERLLLLEGPAMLLLVDQHRAHERVLYERLAAAHPSADDTVPLPEPLVIDVRPAYRDRFARWLDELAAYGFQAEPFGPRSFLVRTVPALPGVVAGPPELQDLGQPAALAPALLALLEESEDAWDDTSWRDRLLIQLACRLAVRRGRPLARPAMRALVQAWGATKTPAICPHGSPIVLRVEDETLAHQFDW
SIO_010081: TRD_RS11220
subclass of: SO_0000673
so part of: TRD_RS11220
location: complement(433436..435166)
location: region:433436-435166:-1
so has part: feature:433436-435166:-1:exon

WP_012642837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433436-435166:-1:exon

TRD_RS11225
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: mutS
locus tag: TRD_RS11225
old locus tag: trd_A0449
so part of: sequence
location: complement(435188..437833)
location: region:435188-437833:-1
so has part: feature:435188-437833:-1:exon
subclass of: SO_0000010

position:435188:-1
position: 435188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437833:-1
position: 437833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435188-437833:-1:exon

TRD_RS11225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: mutS
locus tag: TRD_RS11225
old locus tag: trd_A0449
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013560469.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO process: GO:0006298 - mismatch repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch repair protein MutS
translation: MGSTRRAIQHRLPATKESSSDDLVPSRRQYLRLKAHYPHAILLYRLGDFYEAFDEDARIVARDARITLTSRSFGRNGRVPMAGIPHHALNHYLARLLAAGHTIAIAEQVSEPGKGLVERAVTRVLTPGTVAEAALLPTTENRYLAAVARLPERTGLAWVDVSTGEFAVLELSGAERDLLLAEEYARLAPAETLVPDTDEIPLPPGGCLTRLEHWHFEPERAAQRLRALFATRSLAPFGCQHLPAALAAAGAIVVYLERTNPALLSLLTSLRTEVPARRVGLDAATRRNLELTRSLGTGGTRGSLLGVLDRTVTPMGARTLRRLVSEPLRDLDELRRRQHIVGALRATPELRSRLGSILLAAGDLERLTSKIVQGSATIRDFATLRQALATAEALRGALQASGEPALQRFADDFISCPELAALLERALIEDSDGPRLRPGFCPELDAVLAAVEETRRFLATLEQRERERTGIRSLKVGYNKVFGYYIEVTRPHLSRVPPDYVRKQTVATGERFITPELKDAEARLLAAEAEIAELERAALARLTREVTTRTNELLRLAGWIAWLDAFRSLAEVAAQYDWSCPELDESDTILIEGGRHPVVEVLLDGQPFVPNDCQLGGDGPRLLLVTGPNMGGKSTYLRQVALIVLLAQIGSFVPAARARIGLVDRIFCRVGAHDDLPGGQSTFMVEMVETATILRQATQRSLVILDEVGRGTATQDGLAIAWAVLEDLHDRVGARTLFATHFLELTALEAELPGVANVHVAAMEQDGRVVFLYRVRPGAADRAYGIHVARLAGLPPWVADRAERLLIGRPAPTPAAPHSETAEHPHGLTASPHQLALPGFPTRRHAAEELARALLELDLANLTPRQALDWLFEQRAKLGRA
SIO_010081: TRD_RS11225
subclass of: SO_0000673
so part of: TRD_RS11225
location: complement(435188..437833)
location: region:435188-437833:-1
so has part: feature:435188-437833:-1:exon

WP_012643062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435188-437833:-1:exon

TRD_RS11230
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11230
old locus tag: trd_A0450
so part of: sequence
location: complement(438153..438362)
location: region:438153-438362:-1
so has part: feature:438153-438362:-1:exon
subclass of: SO_0000010

position:438153:-1
position: 438153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438362:-1
position: 438362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438153-438362:-1:exon

TRD_RS11230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11230
old locus tag: trd_A0450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRDLVLALVVPILSVAIAVALVVAIGETLLFVREMTHDRWPPVFVGTAIMIVFTFLAWFLARRPATSR
SIO_010081: TRD_RS11230
subclass of: SO_0000673
so part of: TRD_RS11230
location: complement(438153..438362)
location: region:438153-438362:-1
so has part: feature:438153-438362:-1:exon

WP_012642619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438153-438362:-1:exon

TRD_RS11240
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11240
old locus tag: trd_A0452
so part of: sequence
location: 438775..439938
location: region:438775-439938:1
so has part: feature:438775-439938:1:exon
subclass of: SO_0000010

position:438775:1
position: 438775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439938:1
position: 439938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438775-439938:1:exon

TRD_RS11240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11240
old locus tag: trd_A0452
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007779429.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal phosphate-dependent aminotransferase
translation: MQDLLAERMGRLGTESAFEVLARARALEAQGRSIIHLEIGEPDFDTPPHIVEAAIEALRGGDTHYTPAAGLPELRAAIAEEVSRTRGIPVEPDRVVVTPGGKPIMFFTILALAEEGAEVIYPDPGFPIYESVIRFAGATPVPLPLREELGFAFDPDELRRLVTKRTRLVIVNSPHNPTGAVIGREVLEELARLAQEYGFIVLSDEIYRRIVYDVEAPSIASLPGMAERTVILDGFSKTYAMTGWRLGYGVAPRWLAEHLVRLAVNCHSCVPGFTQRAGLAALRGPQDAVDRMVAEFRRRRDAVVAGLNSLPGVRCAVPAGAFYVFPNVTETGRSASELARELLEQAGVAVLAGTAFGRYGEGYLRLSFANSLENLLEAIERMRRYLG
SIO_010081: TRD_RS11240
subclass of: SO_0000673
so part of: TRD_RS11240
location: 438775..439938
location: region:438775-439938:1
so has part: feature:438775-439938:1:exon

WP_226980766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438775-439938:1:exon

TRD_RS11245
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11245
old locus tag: trd_A0453
so part of: sequence
location: 440479..441000
location: region:440479-441000:1
so has part: feature:440479-441000:1:exon
subclass of: SO_0000010

position:440479:1
position: 440479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441000:1
position: 441000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440479-441000:1:exon

TRD_RS11245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11245
old locus tag: trd_A0453
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018168390.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase subunit II
translation: MQVGVGVLFLLLTIAWTGVLWWVATRSGQAVPYERVSAVISRIRRWGAPLVVALLAIAFLVSLLFLPYAGSRAQRLGEPAVTVDVTGRMWAWELSRTTLPRGQVVEFRVTALDVNHGFGIYAPDGRIVTQVQAMPGYTNRLLFRFDQPGVYTIRCLEFCATGHHLMQAQFTVQ
SIO_010081: TRD_RS11245
subclass of: SO_0000673
so part of: TRD_RS11245
location: 440479..441000
location: region:440479-441000:1
so has part: feature:440479-441000:1:exon

WP_012642720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440479-441000:1:exon

TRD_RS11250
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11250
old locus tag: trd_A0454
so part of: sequence
location: 441015..442499
location: region:441015-442499:1
so has part: feature:441015-442499:1:exon
subclass of: SO_0000010

position:441015:1
position: 441015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442499:1
position: 442499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441015-442499:1:exon

TRD_RS11250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11250
old locus tag: trd_A0454
inference: COORDINATES: protein motif:HMM:NF012343.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO process: GO:0009060 - aerobic respiration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cbb3-type cytochrome c oxidase subunit I
translation: MAGNAHSNVAARRSVEQAALAYMVTGFAVFLLMGLLGLLMRLQHAGLIDLGPRWFYRIMTLHGAGMVAGVLLASLGGVSQVITARIRLSPRLLWSAYVVYFLGSGLVVLATLVGGFAAGWTTTYPLPVRGDWPVSATWAFLLGYTLVAVAFLLWCLAVLVGARRAFGGLTSALAWPVLFRHPVGTGQPIPTGPELAATVVAIDGVIAVLAGVVYLVPIFAQLLGLVSGFDVLFAKNMLFLFGHTLVNLNIYLAVALVYATLGAYTGRAFKMSFPVALAFNLVIVLVLLPYFHHLYQDFAQPLPLHLVGQFGSYAVGVPAFFVTIVGSLGLLYGSRVRWSAPVIFILAGLWGWTVGGMAAVIDGTIAINNVMHNTLWVPAHFHSYYLFGAAGYTWAYLFHRLSGVEGWASSALARRLAWLYAIGAGGFVLAFFLSGLQSVPRRYAVHLPEWQGLAQAAVPFVLLLVIAFGGLLLMALRSVPAAWRLPVAEPTGDD
SIO_010081: TRD_RS11250
subclass of: SO_0000673
so part of: TRD_RS11250
location: 441015..442499
location: region:441015-442499:1
so has part: feature:441015-442499:1:exon

WP_012643266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441015-442499:1:exon

TRD_RS11255
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11255
old locus tag: trd_A0455
so part of: sequence
location: 442529..443401
location: region:442529-443401:1
so has part: feature:442529-443401:1:exon
subclass of: SO_0000010

position:442529:1
position: 442529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443401:1
position: 443401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442529-443401:1:exon

TRD_RS11255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11255
old locus tag: trd_A0455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013647070.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: formate/nitrite transporter family protein
translation: MRGRIVVRGGGKVTMRGMAERQDGQVEERSESVPPPVLVALMLEAAEKKAHLPIAALLARGAASGALLGAATLLAMTAWAQGLPRLVGAVVFPVGFCMLVLLGLELATGNFALLPAAWYRRRITAAAVVRNWGWVYLGNCLGSIGFAVLAVASLTGWWSHEAGPLGEQLRQLAASKVLLYRESGWLGWSTALTKGVLANWLVTVGTALAFVSRSTSGKIAAMWLPIMTFFGLGYEHSIVNLFVIPAGMLAGAPIGVGTWLIWNQVPSTLGNVIGGALFTGLPLVWTHGER
SIO_010081: TRD_RS11255
subclass of: SO_0000673
so part of: TRD_RS11255
location: 442529..443401
location: region:442529-443401:1
so has part: feature:442529-443401:1:exon

WP_012642455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442529-443401:1:exon

TRD_RS11260
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11260
old locus tag: trd_A0456
so part of: sequence
location: 443398..444273
location: region:443398-444273:1
so has part: feature:443398-444273:1:exon
subclass of: SO_0000010

position:443398:1
position: 443398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444273:1
position: 444273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443398-444273:1:exon

TRD_RS11260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11260
old locus tag: trd_A0456
inference: COORDINATES: protein motif:HMM:NF021214.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase assembly protein
translation: MSSVPEPLVWLPLSAWLDPRNWTWRVPVVVVLSWLLAGYAVGMMRLAARWPQGWRLAPRAFAWGIGAAMLALALLSPLDDLGGLFFSWHMVQHLVLLYAAPVLLRGWPYPVFLWALPACLRVRVAALLWHGALGDRLLRWATRPVVAFATGILSLWLWHYPPLYDAVLARRWLHDLEHLTFFLGALLYWWPLIGAPPATGRFRTDGGRALYLILYGVQAGVLGALVTFWPSVLYHRYLAASGVPVERLLADQAFGGLVMWLSGPIVVTLLALATLGRASREVAESEVLTPH
SIO_010081: TRD_RS11260
subclass of: SO_0000673
so part of: TRD_RS11260
location: 443398..444273
location: region:443398-444273:1
so has part: feature:443398-444273:1:exon

WP_012643073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443398-444273:1:exon

TRD_RS11265
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11265
old locus tag: trd_A0457
so part of: sequence
location: 444320..445639
location: region:444320-445639:1
so has part: feature:444320-445639:1:exon
subclass of: SO_0000010

position:444320:1
position: 444320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445639:1
position: 445639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444320-445639:1:exon

TRD_RS11265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11265
old locus tag: trd_A0457
EC number: 1.-.-.-
inference: COORDINATES: protein motif:HMM:NF013739.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MGEPIREDRVLVLGGGIAGLVAAWELHRAGVAVELLEARDRVGGRLWTSDEYGPFPVELGAEFIHGDRVITWRFLRMFGLRAIDDPSQDRRFVGANGRILPSGELSRPVGEAIFAPLSQAAEAWFASGEPDTDLATALRWWASRQGITITPELWELWETLAAIGWSADLAEIGAAGEVEATYEGDGWRNWRIAEGQQALARRIAEELGSVIRLGSAVSRVEWGNEGVRVWASDGEHRGRWAIVALPLGVLQAGTIEFVPELPEPLREAIDRLLPGRSLKMVVEFTYDPWGPEIGCLFVTTPHGIWERPGLGFAASEPVFSLLTGGRDAARLGALPPEQAVREVVQALGAVLGQELTGRVRRAQVIDWTRDPWCRGGYSVVPPGGAGLRARFGQPIGDRLVFAGEHTSVVRPSTVHGAIESGLRAAEQIRALRSATAAGA
SIO_010081: TRD_RS11265
subclass of: SO_0000673
so part of: TRD_RS11265
location: 444320..445639
location: region:444320-445639:1
so has part: feature:444320-445639:1:exon

WP_012642551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444320-445639:1:exon

TRD_RS11270
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11270
old locus tag: trd_A0458
so part of: sequence
location: complement(445709..446485)
location: region:445709-446485:-1
so has part: feature:445709-446485:-1:exon
subclass of: SO_0000010

position:445709:-1
position: 445709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446485:-1
position: 446485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445709-446485:-1:exon

TRD_RS11270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11270
old locus tag: trd_A0458
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017948617.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD-IIA family hydrolase
translation: MRTISGFLLDVDGVLHIDGEPIPGAVQAVLELRARGIPFVLLTNTTIRTRRQLGALLRELGFPVADDEIVTAGAATAAYLRAHYPGEPCYLLVDGDVQEEFAGIPLVEDDSATVVVFGGAGPVYSYDRLNRAFRLLLRGAHFVAMHRNLVWDRRDGPALDTGAFLLGLEAALGRQAHLVGKPSPDFFRAGLERLGLSPERVAVVGDSLAADILPARQLGMTGVLVQTGRFRPNDLELGRPDALLPSIAELPSWLSRAS
SIO_010081: TRD_RS11270
subclass of: SO_0000673
so part of: TRD_RS11270
location: complement(445709..446485)
location: region:445709-446485:-1
so has part: feature:445709-446485:-1:exon

WP_012643068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445709-446485:-1:exon

TRD_RS11275
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11275
old locus tag: trd_A0459
so part of: sequence
location: 446769..447620
location: region:446769-447620:1
so has part: feature:446769-447620:1:exon
subclass of: SO_0000010

position:446769:1
position: 446769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447620:1
position: 447620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446769-447620:1:exon

TRD_RS11275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11275
old locus tag: trd_A0459
inference: COORDINATES: protein motif:HMM:NF013088.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MIGAWLGLAVAAAVAWGTADFLAGLAARRLPLLIVLFGVQAIGLAIVLPFWLAWSGDGTVPGMAVAAGFAMVAGLAALYRGLARGPVSVVAPVGALGGAVPVGIGLLTGENLAGEHLLGVLAGLVGLSLVTWERDRVAPRGQSTRAALAHGVAAALSLGLAVALLGVAGEGEPLGAVVAARVTAVLLLGAAVAGWLRRHRDRSLLRHCALAVAAAGVLDVAATVSFALAAERGPLGPSGLVASLYPASTVLLGVVVLGERLSVLRWAGIGLILAGVALLRGAG
SIO_010081: TRD_RS11275
subclass of: SO_0000673
so part of: TRD_RS11275
location: 446769..447620
location: region:446769-447620:1
so has part: feature:446769-447620:1:exon

WP_012642873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446769-447620:1:exon

TRD_RS11280
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11280
old locus tag: trd_A0460
so part of: sequence
location: 447723..448664
location: region:447723-448664:1
so has part: feature:447723-448664:1:exon
subclass of: SO_0000010

position:447723:1
position: 447723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448664:1
position: 448664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447723-448664:1:exon

TRD_RS11280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11280
old locus tag: trd_A0460
EC number: 1.1.1.60
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017290705.1
GO function: GO:0008679 - 2-hydroxy-3-oxopropionate reductase activity [Evidence IEA]
GO process: GO:0019580 - galactarate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-hydroxy-3-oxopropionate reductase
translation: MRCGNWGRVARSGKVETMERIGFIGLGIMGQPMARNLLRAGFPLTVYTRDRRKIEAFVEQGANGANSPREVAERSTVVITMLPDSPEVEEVALGPNGVIEGIQSGSLFIDMSTIDPSVARKLHAAFAERGVEALDAPVSGGQIGAEQGTLSIMVGGSEEAFQRALPVFQAMGKNITHVGGPGAGQVAKACNQVVVALTIQAVAEALLLAEKAGVDPARVRQALLGGFAHSRILEVHGQRILERAFAPGFRARLHRKDLRIAQNLAREQAVPLLATQQVAALFDSMLARGLGEHDHSALALVYRALAGEQGEDS
SIO_010081: TRD_RS11280
subclass of: SO_0000673
so part of: TRD_RS11280
location: 447723..448664
location: region:447723-448664:1
so has part: feature:447723-448664:1:exon

WP_143714851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447723-448664:1:exon

TRD_RS11285
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11285
old locus tag: trd_A0461
so part of: sequence
location: complement(448872..450356)
location: region:448872-450356:-1
so has part: feature:448872-450356:-1:exon
subclass of: SO_0000010

position:448872:-1
position: 448872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450356:-1
position: 450356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448872-450356:-1:exon

TRD_RS11285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11285
old locus tag: trd_A0461
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019121619.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidase family protein
translation: MTMHEELAYMSATELALHIRRRQLSPVEVVDAFITRIEQRNPSLNAFVYFGFDEARQRARDAEQAVLRGDPLGPLHGVPTAIKDLFDFKPGWKSTFGGIRALKDHVVNAYCLFAERVERAGAIVLGKTNSPVMGFRGTCDNYLFGPSRNPFDLRRNTGGSSGGSAAAVADGLVPFAEGTDGGGSIRIPAAWCGVYGYKASFGRVPFVARPNAFAGDTPFLFEGPITRTVEDAALVLSAIAGYDPRDPFALDEQVDFLAATRRSIHGWRIGYSPNFDVFPVEPEVATVVSRAVRAFEEAGATVEEVRIGITRSQRELSDLWCRLIMPINLLTLDGFAAQGIDLLGEHRDDFPPQYLEWVEKTRSMTALDFYRDQCIRSEVYDAIQSVFERYDLLVTPTLACLPVENADDGNTVGPSQVNGESVDPLIGWCLTYPVNFSGHPAASIPAGLSASGLPVGLQIIGRRYADADVLTASAVFERVRPWQELYQRCAARPL
SIO_010081: TRD_RS11285
subclass of: SO_0000673
so part of: TRD_RS11285
location: complement(448872..450356)
location: region:448872-450356:-1
so has part: feature:448872-450356:-1:exon

WP_012643110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448872-450356:-1:exon

TRD_RS11290
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11290
old locus tag: trd_A0462
so part of: sequence
location: complement(450496..451200)
location: region:450496-451200:-1
so has part: feature:450496-451200:-1:exon
subclass of: SO_0000010

position:450496:-1
position: 450496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451200:-1
position: 451200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450496-451200:-1:exon

TRD_RS11290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11290
old locus tag: trd_A0462
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARVITADAAGAQVAGGLALGTALLEVAGTVYAWSVSRARLSQEPNDPPSAGQAVAWLTANRLDAPVPPDRHAADHLPHPIDSHPPLVQRLERLGTTIELAWRAALTPNRPSASLLPQAAEIDRRLTDRISELAHLIRSKARTSDQKSENDRSASVARAGQAGLPAPQHGAPHANPISRRDTEGTLAFSSNRGGESPRNERCCAGSPRSRPRPLVLPLPLAMIRSAQPGTRASA
SIO_010081: TRD_RS11290
subclass of: SO_0000673
so part of: TRD_RS11290
location: complement(450496..451200)
location: region:450496-451200:-1
so has part: feature:450496-451200:-1:exon

WP_012642590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450496-451200:-1:exon

TRD_RS11295
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: csx2
locus tag: TRD_RS11295
old locus tag: trd_A0463
so part of: sequence
location: complement(451682..452875)
location: region:451682-452875:-1
so has part: feature:451682-452875:-1:exon
subclass of: SO_0000010

position:451682:-1
position: 451682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452875:-1
position: 452875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451682-452875:-1:exon

TRD_RS11295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: csx2
locus tag: TRD_RS11295
old locus tag: trd_A0463
inference: COORDINATES: protein motif:HMM:NF021006.2
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR02221 family CRISPR-associated protein
translation: MTVLGTSTYQETTYVWDDGERIRRHRSALFPVALDAWLAAERFLVLLTPDSAAHANWRQLEAHLGERAQPVPIPAGKSEAELWQIFDALVAAVPEQAELVLDVTHGFRSLPLFAAVAALVLRQLRGVTIQRILYGAFEARDRERDETPVFDLSPLVDLAEWSSGIEALERSGDGRLLAARIQATHSDLYRKQAPELPRQLAGVGNKLGALSQAVWLNRPLEALAAAHQLDQQLATAQEELARWTPPFAVLAERVRAEIAPLAHPNPEQLDEGNLRAQLELIRYALGKGLVLQAVTLAREWLVSWYLWRTFPELRPSWLQRESRQRAENELNALQQQLRDGSPLLHALPERRIAEVWDQVTQLRNDLAHCGMRTDRSTPDRVTRRARELVTELATLLQ
SIO_010081: TRD_RS11295
subclass of: SO_0000673
so part of: TRD_RS11295
location: complement(451682..452875)
location: region:451682-452875:-1
so has part: feature:451682-452875:-1:exon

WP_226980767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451682-452875:-1:exon

TRD_RS11300
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11300
old locus tag: trd_A0465
so part of: sequence
location: 453059..454063
location: region:453059-454063:1
so has part: feature:453059-454063:1:exon
subclass of: SO_0000010

position:453059:1
position: 453059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454063:1
position: 454063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453059-454063:1:exon

TRD_RS11300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11300
old locus tag: trd_A0465
inference: COORDINATES: protein motif:HMM:NF017496.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Uma2 family endonuclease
translation: MRAWGGWVRPAPLQDDPSWYETGLSEDELIGILPARSIGEESGEDLPPDVIEFLTADEDDADRPEPEEPEDPEAALSPAGVVLLPEPGVCSTRPASIPQWAVDEKAADRLRDRRTVSSAVGRSSAAQPRSTSMTRSSGRSAEGEAAATGSTTPAEDERALAAQAHEPPGRWDDLAWPLAWLAEQLAAILEPRWVVLAHLPCRLGPYCAVQLSAPLAVVEPTHWATARTGVLTGAPRLVIEVAEAENRGVVLRRRVDQWLGHGAGEVWVVDPARGWLTSERPGREPSWYAPPAPLPLGALAPGRSVDLAPLVRPAGAGPEGGDPGARPDATRSRR
SIO_010081: TRD_RS11300
subclass of: SO_0000673
so part of: TRD_RS11300
location: 453059..454063
location: region:453059-454063:1
so has part: feature:453059-454063:1:exon

WP_012642823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453059-454063:1:exon

TRD_RS11305
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11305
old locus tag: trd_A0464
so part of: sequence
location: complement(454047..454511)
location: region:454047-454511:-1
so has part: feature:454047-454511:-1:exon
subclass of: SO_0000010

position:454047:-1
position: 454047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454511:-1
position: 454511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454047-454511:-1:exon

TRD_RS11305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11305
old locus tag: trd_A0464
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014626665.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRRAFLALIASLPLGVACRRSSRGTTSDATPSESSGSADPYGYGSGAQPAPTSYQMIEPWAMHQVPLYPGAQPGDLSPLATQVENGGTISFAVPDPADRVLEFYRTALPQLGWQLQSAPKNSLAAKRGEAALTVVVKASDQGTTVLLMLTDAI
SIO_010081: TRD_RS11305
subclass of: SO_0000673
so part of: TRD_RS11305
location: complement(454047..454511)
location: region:454047-454511:-1
so has part: feature:454047-454511:-1:exon

WP_012642947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454047-454511:-1:exon

TRD_RS11310
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11310
old locus tag: trd_A0466
so part of: sequence
location: complement(454577..455362)
location: region:454577-455362:-1
so has part: feature:454577-455362:-1:exon
subclass of: SO_0000010

position:454577:-1
position: 454577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455362:-1
position: 455362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454577-455362:-1:exon

TRD_RS11310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11310
old locus tag: trd_A0466
inference: COORDINATES: protein motif:HMM:NF013245.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MADSASTLRALSRRTAALTLTEFRLYAREPYTLFFALILPTVLILIFGTIYGNEPKARYGGLGTVDVSVPAYTAMILATVGLVSVPVHIASLRERGILRRLAVTPVSSLELLVAEVVTAFVLTTLGMALLVLVARLVYDLRWPDRIWPAVLVYMVSALAFFALGFGLGFWLPSATAAQVVGMVLLYPMIFLTGAAMPRELLPERVHQIARFLPLDPVVTLLRSAWAGHALAENGRAFLGVTAVLVAGIALSAARSILPAQE
SIO_010081: TRD_RS11310
subclass of: SO_0000673
so part of: TRD_RS11310
location: complement(454577..455362)
location: region:454577-455362:-1
so has part: feature:454577-455362:-1:exon

WP_012643225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454577-455362:-1:exon

TRD_RS11315
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11315
old locus tag: trd_A0467
so part of: sequence
location: complement(455409..455618)
location: region:455409-455618:-1
so has part: feature:455409-455618:-1:exon
subclass of: SO_0000010

position:455409:-1
position: 455409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455618:-1
position: 455618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455409-455618:-1:exon

TRD_RS11315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11315
old locus tag: trd_A0467
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARRGASEQSSGRVAALRKLSDATQLVSAGGIARGFIALGPERTPRRALASAYCSRSDERASHGGQRWS
SIO_010081: TRD_RS11315
subclass of: SO_0000673
so part of: TRD_RS11315
location: complement(455409..455618)
location: region:455409-455618:-1
so has part: feature:455409-455618:-1:exon

WP_081433488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455409-455618:-1:exon

TRD_RS11320
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11320
old locus tag: trd_A0468
so part of: sequence
location: complement(455626..456471)
location: region:455626-456471:-1
so has part: feature:455626-456471:-1:exon
subclass of: SO_0000010

position:455626:-1
position: 455626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456471:-1
position: 456471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455626-456471:-1:exon

TRD_RS11320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11320
old locus tag: trd_A0468
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012874163.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbohydrate ABC transporter permease
translation: MSAREFPVRRLRPARLAMYAIMVGFALFYLLPVYLMFITGMKSFEEVNISRMWDLPSGLRFDSFMAAWKTLERSFLNSFQMVIPATIVSSLLGSLNGYVLSKWRFRGSDALFTAILFGMFIPYQSILIPLVLTLQRLGLYGSIPGLILTHVVYGIPITTLIFRNYYASIPTELLEAAKVDGAGFFTIYRRVILPLSATGFVVVAIWQFTSIWNEFLFGLVITNSPQERPVTVALQNIAGSQYTMWNVQMAGALLVALPTLLVYILLGRYFLRGLLAGSLKG
SIO_010081: TRD_RS11320
subclass of: SO_0000673
so part of: TRD_RS11320
location: complement(455626..456471)
location: region:455626-456471:-1
so has part: feature:455626-456471:-1:exon

WP_012643084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455626-456471:-1:exon

TRD_RS11325
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11325
old locus tag: trd_A0469
so part of: sequence
location: complement(456468..457481)
location: region:456468-457481:-1
so has part: feature:456468-457481:-1:exon
subclass of: SO_0000010

position:456468:-1
position: 456468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457481:-1
position: 457481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456468-457481:-1:exon

TRD_RS11325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11325
old locus tag: trd_A0469
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012119700.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter permease
translation: MAGKVAEQVRPRVARREAEARVRFPRVDRFIPFVVLAPSVAAILVFVYGFILWSTVVSLSRWQGIVPDLTFVGFRNYATIFTSYRFQSDLRNTIVFTIFFLIGSLVIGLLLAVLLDSRVRGESFFRTVYLFPMAISFVVTGTAWQWLFVPGTPQEPTGLNLLFRKLGLPVFIAWSTTSEVWPGGGWQPDWLRVPLGIPLAMLPVIIAAIWQMSGFTMAMYLAALRGIPDELREAARVDGASEWQVFRYITFPLLQPVTLAAVIVLGHISLKIFDLIMTQTGGGPGFATDVPGIFMYETTFKSNKYAEGAAIAIVMLVMVSVLIVPYLIWRLRTETER
SIO_010081: TRD_RS11325
subclass of: SO_0000673
so part of: TRD_RS11325
location: complement(456468..457481)
location: region:456468-457481:-1
so has part: feature:456468-457481:-1:exon

WP_012642965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456468-457481:-1:exon

TRD_RS11330
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11330
old locus tag: trd_A0470
so part of: sequence
location: complement(457519..458880)
location: region:457519-458880:-1
so has part: feature:457519-458880:-1:exon
subclass of: SO_0000010

position:457519:-1
position: 457519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458880:-1
position: 458880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457519-458880:-1:exon

TRD_RS11330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11330
old locus tag: trd_A0470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012874165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MERSTQFGSSQQLTRRQLIRRTLAIGVALSSSASLLAACGGGAQPTPTPAPQAAQTPAAAAEDKLEIFSWWTNPGEADGLAALFEIFKQRRPGVEIINATVAGGAGTNAKAVLVTRMQGGNPPDSFQVHAGQELIGTWVVAGKMEPINDLFEQEGWSKVMPKTLLDQISYKGEFFSVPVNIHRSNMLWYNKKVFADNGLEPPKTLDDFFAVAEKLKAAGVTPLSVGGKDKFEVPHLFEDLLLAVFGPADYTKLFSEPSLWESDPRVDEAIEVLDRFLSFANEDRSALSWADAAQRVIDGTAAMTIMGDWAYGYFINKGAKAGEVFGWAPSPGTDGMFMWLSDSFGLPKGAPHRNNAIEWLKVCGSREGQDAFNPKKGSIPARTDPDRSVYDEYLLYSIDRFAQDALAPSVVHGAAANEAYMTEYGNALNVFSASRDKKQVKSMLIEAARELKT
SIO_010081: TRD_RS11330
subclass of: SO_0000673
so part of: TRD_RS11330
location: complement(457519..458880)
location: region:457519-458880:-1
so has part: feature:457519-458880:-1:exon

WP_012642674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457519-458880:-1:exon

TRD_RS14935
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14935
old locus tag: trd_A0471
so part of: sequence
location: complement(458931..459743)
location: region:458931-459743:-1
so has part: feature:458931-459743:-1:exon
subclass of: SO_0000010

position:458931:-1
position: 458931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459743:-1
position: 459743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458931-459743:-1:exon

TRD_RS14935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14935
old locus tag: trd_A0471
inference: COORDINATES: protein motif:HMM:NF019349.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FCD domain-containing protein
translation: MTTVEVRKLPTQVAVHLGRELIALAGEPGAVLPSEQEICTRYGVSRTVAREAMQLLAGLDLVRISSGRRMELRPPQEWNYLHPLLLDMLDPVEVRHLLVELHDVRLMIEPVVAARAACVIGPDQLHRLEATLEAMRALESEPDRYLERDLEFHAQICAVIGNRVLDRILHACRWLLMASRRVTNRLWDSLASVTDEHRAIYRALAVHDPQAAEAAMRAHLAGNARAWSLPPELIAAVLEPAAQSVRERVASGVNTPMRKGGSDEVIEVDR
SIO_010081: TRD_RS14935
subclass of: SO_0000673
so part of: TRD_RS14935
location: complement(458931..459743)
location: region:458931-459743:-1
so has part: feature:458931-459743:-1:exon

WP_012642598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458931-459743:-1:exon

TRD_RS11340
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: cas10
locus tag: TRD_RS11340
old locus tag: trd_A0473
so part of: sequence
location: complement(459979..461292)
location: region:459979-461292:-1
so has part: feature:459979-461292:-1:exon
subclass of: SO_0000010

position:459979:-1
position: 459979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461292:-1
position: 461292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459979-461292:-1:exon

TRD_RS11340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: cas10
locus tag: TRD_RS11340
old locus tag: trd_A0473
inference: COORDINATES: protein motif:HMM:TIGR02578.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III-A CRISPR-associated protein Cas10/Csm1
translation: MDSFETLLVASLLHDLGKLWQRTGQRHSDRYAAYGPSDYGPNGAHAKWSADAIERWLPQWRAAADAILRHHQPADRFARLVALADRLSAAERDDAETDQPPAPPGGGALWAATRLGQRQLRSIFTRLQLAGAPAPAPAYWPLAPLALAPEGLFPNASPVEEVSERQGYEALWQRLVEDLEAIPPTLDFDARLTTVLHLLQRYTWCVPSAYYRQNVADISLHDHLRTTAAIAAALDRSGLDDEALAALLAHRSPDWDTPRLALLAADVTGIQRFLYTLTAARAARSLRGRSFFLQLVTEAVGRWLLRRLNLPLANLLYAGGGRCYLLTQLPSDDQLAALRRDLDRILLATTDGELYLALACRPLACADLAEPERFRAAWEARKGRPLPLVGTTRLARHALFDQTRRLAHLLRAPAEPCLTVPLEIWWADQLSSTSDLR
SIO_010081: TRD_RS11340
subclass of: SO_0000673
so part of: TRD_RS11340
location: complement(459979..461292)
location: region:459979-461292:-1
so has part: feature:459979-461292:-1:exon

WP_012643100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459979-461292:-1:exon

TRD_RS11345
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11345
old locus tag: trd_A0474
so part of: sequence
location: complement(461615..462394)
location: region:461615-462394:-1
so has part: feature:461615-462394:-1:exon
subclass of: SO_0000010

position:461615:-1
position: 461615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462394:-1
position: 462394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461615-462394:-1:exon

TRD_RS11345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11345
old locus tag: trd_A0474
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRPRHRRARPRRRNFWRAWRETPLASALAALALGILLTVIVWAGRVGITGGVSPGLAPTDAALGFAGGFLSWLGQLTGLHRHGIAFLPTAPEADLDDPRQFPPQPWLTWLTHLALVLYVAGLPALGTALSIRVHLPHPWRALALLGLAGSLTALGLLALWRPNQLNRWLYRYERIFWLLPLPAMGNPTLGAYSGLTARRFDQVWLLQLIVTLGLAVLAHWLLATGLLSVWSHRPRRMTAQQPAPETGSFRPVGRDPEP
SIO_010081: TRD_RS11345
subclass of: SO_0000673
so part of: TRD_RS11345
location: complement(461615..462394)
location: region:461615-462394:-1
so has part: feature:461615-462394:-1:exon

WP_012643080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461615-462394:-1:exon

TRD_RS11350
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11350
old locus tag: trd_A0475
so part of: sequence
location: 463564..464514
location: region:463564-464514:1
so has part: feature:463564-464514:1:exon
subclass of: SO_0000010

position:463564:1
position: 463564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464514:1
position: 464514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463564-464514:1:exon

TRD_RS11350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11350
old locus tag: trd_A0475
inference: COORDINATES: protein motif:HMM:NF013706.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarylacetoacetate hydrolase family protein
translation: MRLVTYSERGRTSVGVLEAGWILDIPQAYTELLRQQGVADAAGRALAECPPDVVLLLARDGLGRAREAVAFAREALARDREGALQRGLAVAADAPGVRLRAPLQRPGKIICLGLNYADHARETNSPIPQYPELFNKFANALIGPGEPIVLPRVSQQVDYEAELAVVIGKPGRYIDEQRALEHVAGYTVLNDVSMRDFQFRGRQWMQGKTFDRSTPLGPWIVTAEEIPDPQALDISCEVSGEVLQRSNTREMIFSVAAVVAYISQIMTLEPGDLIATGTPAGVGFAREPKRLLQPGDVVRVTIERIGTLENPVIAEE
SIO_010081: TRD_RS11350
subclass of: SO_0000673
so part of: TRD_RS11350
location: 463564..464514
location: region:463564-464514:1
so has part: feature:463564-464514:1:exon

WP_012642977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463564-464514:1:exon

TRD_RS11355
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11355
old locus tag: trd_A0476
so part of: sequence
location: complement(464579..464881)
location: region:464579-464881:-1
so has part: feature:464579-464881:-1:exon
subclass of: SO_0000010

position:464579:-1
position: 464579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464881:-1
position: 464881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464579-464881:-1:exon

TRD_RS11355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11355
old locus tag: trd_A0476
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGRLDTPRARDSRPCLLVNFGEYACGDFYVVMREEALRELAARKWTVDRLREALCGERVAVTGVLATYRAGARVNPQIEYQEPGRLVVFRPPQRGGNIVI
SIO_010081: TRD_RS11355
subclass of: SO_0000673
so part of: TRD_RS11355
location: complement(464579..464881)
location: region:464579-464881:-1
so has part: feature:464579-464881:-1:exon

WP_012642928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464579-464881:-1:exon

TRD_RS11360
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11360
old locus tag: trd_A0478
so part of: sequence
location: complement(465226..465765)
location: region:465226-465765:-1
so has part: feature:465226-465765:-1:exon
subclass of: SO_0000010

position:465226:-1
position: 465226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465765:-1
position: 465765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465226-465765:-1:exon

TRD_RS11360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11360
old locus tag: trd_A0478
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLGLTRPVESTVERHQDKLALLPLYWFGWKLGHLVGEVVGPLGDTRPDLRATEPLAVTVPTLGQPSVAAVGLSTTRPVRQPAERSLLQSYRCIKELPITKRLLAALVGSATRSELLLIAFGLGLVLLGEESLTAETVLPLLADILLLLAELLLALVAGAVLADLIMSVLLILRAVLSEG
SIO_010081: TRD_RS11360
subclass of: SO_0000673
so part of: TRD_RS11360
location: complement(465226..465765)
location: region:465226-465765:-1
so has part: feature:465226-465765:-1:exon

WP_012642799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465226-465765:-1:exon

TRD_RS11365
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11365
old locus tag: trd_A0479
so part of: sequence
location: complement(465906..470729)
location: region:465906-470729:-1
so has part: feature:465906-470729:-1:exon
subclass of: SO_0000010

position:465906:-1
position: 465906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470729:-1
position: 470729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465906-470729:-1:exon

TRD_RS11365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11365
old locus tag: trd_A0479
inference: COORDINATES: protein motif:HMM:NF012905.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD-IC family P-type ATPase
translation: MNRPRIRVLHQLPGRVRLSLDPYPPDGALAQVRRLPGILAATGNALTGTWLLRVDPALWSTEALLEELAQRLDQSDRAASSGEADSERPGDTASARSRRVRVEHAVTRQVGTVSRRRLRLAVPGLEGNPHLAQAIEDALGRLGAAVVRASALTGRVLVELDESINLSEVIASIAGLDLPELPPSARRVISPFDQDLLTYGIVRSTGTALALGLLVARQLLGRPAALTTSPVPSLIADALTVLRGFPTLREGMRRLLTPIGADIATSSLGIVTQALAGQRIGLLVSFLEALRLLTVLLPWQRAWQRYERQLAESSLPHPGATARVSPGSRLPLPAVLEDGELLTLSPAGTVEHRTRGQTVAAGSFVLYGQAIVRYRAVEPGAAWRPRPTPLPALTQRYLDLIAPLALGAAAVNGLRAGSLAAAGRALVLLNARPALIGTEIADLGAVARALRAGTLVTRLAPGRRLVRPSVIVLDHPLLLSDGFELDTAISLDDALSLDELLECSARLALEQRLPFASAFPLPTNGRRNGLRDWRRFELTGANGATHPVAQKLLERGSLPVLLCERGCGRVAGVIALRPCLSAAGRELVSRCRQQGIRVLVRGAPDTRLTWLETVGVEVLADSDPATTIAGLRRSGQRVFYVADHLGNPSAFREADLGIGLQPNGVVLDYPVDVLASDLAAVMTLLDIGERRDQAVRDTTLVSLASNLAALALGFGLPVSPTLAAILLGGSALLAIVLSWVRLWGQPPSSVAPVYVDPEPERWGDRAPDELFREFATSPHGLSASEALRRLAIEPSDSQLSPWVQAALEQLSSPLVAIMAAGAALSLAVNAPLDVLIIVGTIAVNTLLGTWQDVRVARATSELARLTETTARVRRDGDEQLIPASELVPGDIVLLRFGDLVPADARLIETNNFAVDESALTGESIPVQKDAAARDERAVVLAGSAVVSGTAVAVVVATGPRTRLGALRRSLELSEENRDHLTERLAQYTRLSLPISFATAAAVTLSGILRGLPPAAQLGLGASLAIAAVPEGLPLLSRVAQAATARRLARNGIVVRRLSAAEALGRVSIVCVDKTGTLTAGKLSVTHILTSAGLESLPGQLSELARRTLTSAALASPPPSRSDAFTHGTDAAVLRAALEAGLRDRLDVPRDQELPFESTQPYHAVRIGGTAYFKGSPEVLLDRCRAWLAADGSLQPLDDARHAELADHLLRLAGAGLRVLLVAEADGSVRLEDPTDLRLIGFLGLSDPLRPTVPDAVARCRRAGVRVVMITGDHPATASTIARAAGLTEDERVITGADLASLSDEQLAERLEQVPVIARATPLDKVRIVRALQARGHVVAMTGDGVNDSAALRLADVGMAMGWGTEVARQAADLILIEDDFAALVQALIEGRSFWRNMRRAVALLLGGNLGELLLMGIPSLLGAPAPLNTRQVLMVNLITDVPPALAIALQGPRYQRLEQLAREGETALDRPLRVDVLRRAGATAVPAALAYLWAMTASPSAAPAVAFTALVAGQLAQTLELGLSGAGLTPSLLTGTALSGAVLAATLITPPFRALLGLPALTPAGWLAAGLSTVAAVAASQAIAQLVPTEAEASSPSARPAPISQPA
SIO_010081: TRD_RS11365
subclass of: SO_0000673
so part of: TRD_RS11365
location: complement(465906..470729)
location: region:465906-470729:-1
so has part: feature:465906-470729:-1:exon

WP_012643013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465906-470729:-1:exon

TRD_RS11370
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11370
old locus tag: trd_A0480
so part of: sequence
location: complement(470751..471218)
location: region:470751-471218:-1
so has part: feature:470751-471218:-1:exon
subclass of: SO_0000010

position:470751:-1
position: 470751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471218:-1
position: 471218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470751-471218:-1:exon

TRD_RS11370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11370
old locus tag: trd_A0480
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHEQERDEQAREARSPDDVAAAEHREAEPSERASPERDGQPRRTRVGEPGTPGSSARTRREAPRERATVTAEPSTQVAESVAPSVPPAVAHAEQLVDTAILWAASLGTVVGRRLLKTLVRTKEELEDVLAEAEALRQAWQRGHQPTDRSRQSTDA
SIO_010081: TRD_RS11370
subclass of: SO_0000673
so part of: TRD_RS11370
location: complement(470751..471218)
location: region:470751-471218:-1
so has part: feature:470751-471218:-1:exon

WP_012643121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470751-471218:-1:exon

TRD_RS11375
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11375
old locus tag: trd_A0481
so part of: sequence
location: complement(471232..471471)
location: region:471232-471471:-1
so has part: feature:471232-471471:-1:exon
subclass of: SO_0000010

position:471232:-1
position: 471232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471471:-1
position: 471471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471232-471471:-1:exon

TRD_RS11375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11375
old locus tag: trd_A0481
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008481911.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPELELDDYARPETAIAVAATALLLSPRVRRAVRRGLVYAVAGGLTAIAGGQAILRGARDGFVAARQRLRPQGSIVQPN
SIO_010081: TRD_RS11375
subclass of: SO_0000673
so part of: TRD_RS11375
location: complement(471232..471471)
location: region:471232-471471:-1
so has part: feature:471232-471471:-1:exon

WP_012643195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471232-471471:-1:exon

TRD_RS11380
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11380
old locus tag: trd_A0482
so part of: sequence
location: complement(471826..472929)
location: region:471826-472929:-1
so has part: feature:471826-472929:-1:exon
subclass of: SO_0000010

position:471826:-1
position: 471826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472929:-1
position: 472929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471826-472929:-1:exon

TRD_RS11380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11380
old locus tag: trd_A0482
EC number: 5.3.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873899.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannose-6-phosphate isomerase
translation: MNAALLARPMLLEPVLVERPWGDQRLARYLGKSLPHGARIGESWETANEARVASGPLAGLTLRELVAQFGADLLGQRGMAASQPFGDFPLLIKLIDADDVLSVQVHPDDEQAAALGQRGKTEAWHILAAEPGAELIVGLAELLDPPALRLHIATGELPRVLAHLPVQPGDTVVVPAGTLHAIGPGILLYEIQEQSDITYRFYDWGRVDAQGRGRPLHIEEGLAVLRPERRAQRTQPLPLDDWRTVLAACRYFLLERWTIAGKRVFTRQPGQTPSILTCLEGTLAIQTDGDELHLVRGETALVPASVASLAVAGQATVLAASVPDLRQDIVIPLRAAGYDEAAIAQLAGDTGDLAHALAASEPGERRS
SIO_010081: TRD_RS11380
subclass of: SO_0000673
so part of: TRD_RS11380
location: complement(471826..472929)
location: region:471826-472929:-1
so has part: feature:471826-472929:-1:exon

WP_012643180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471826-472929:-1:exon

TRD_RS11385
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11385
old locus tag: trd_A0484
so part of: sequence
location: complement(472926..473387)
location: region:472926-473387:-1
so has part: feature:472926-473387:-1:exon
subclass of: SO_0000010

position:472926:-1
position: 472926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473387:-1
position: 473387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472926-473387:-1:exon

TRD_RS11385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11385
old locus tag: trd_A0484
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008477503.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRGLGHATLAGLAGAVAFLFAMAVDLAVLRRRTNDLRLLAGLLPGGARFWPLLGTLMHLANGAALGVLYGRLRRVFPFSGWLAGSLFALAENLALWPIVALLDRVHPEIRAGRLEPFNRPVPFLQEVWRHLAYGLTLGILYDRWQRKEGEPAP
SIO_010081: TRD_RS11385
subclass of: SO_0000673
so part of: TRD_RS11385
location: complement(472926..473387)
location: region:472926-473387:-1
so has part: feature:472926-473387:-1:exon

WP_012642468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472926-473387:-1:exon

TRD_RS11390
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11390
old locus tag: trd_A0485
so part of: sequence
location: complement(473384..474658)
location: region:473384-474658:-1
so has part: feature:473384-474658:-1:exon
subclass of: SO_0000010

position:473384:-1
position: 473384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474658:-1
position: 474658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473384-474658:-1:exon

TRD_RS11390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11390
old locus tag: trd_A0485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018111669.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation:proton antiporter
translation: MTAIVEVLSELLIIFLAAKFAGELFLRMRQPAVIGELLAGILIGPFALGLIGVPGHEILELFHEDREAAREGLALALESIAELGVVVLLFFVGLETRLSDLLRVGIRSLAVAVLGVLGPFAGGTVLMLALGYPSIESIFIGTVLVATSVGITARVLRDVGALDSREARIILGAAVFDDIFGLLMLTVVSGIAVSGELELGRVLWVSVLALGFTALVGGLGALVVRRLFPPLVDRLQLEHAPLVVALALMLALAAIAATIGLAPIVGAFLAGMALAEVAERYHLHEQALPIYTFLVPFFFVVTGARVDPRLFLQGETLGLALAVTGVAVLTKALGAALGTIGFPLRSMAVVGFGMVPRGEVGLIVASIGLSLGVVERPLFSVAVVMSMLTTLLTPPLLVWLLRPLIAARRAELATTTGHVEGATS
SIO_010081: TRD_RS11390
subclass of: SO_0000673
so part of: TRD_RS11390
location: complement(473384..474658)
location: region:473384-474658:-1
so has part: feature:473384-474658:-1:exon

WP_012642712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473384-474658:-1:exon

TRD_RS11395
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: lpdA
locus tag: TRD_RS11395
old locus tag: trd_A0486
so part of: sequence
location: complement(474743..476152)
location: region:474743-476152:-1
so has part: feature:474743-476152:-1:exon
subclass of: SO_0000010

position:474743:-1
position: 474743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476152:-1
position: 476152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474743-476152:-1:exon

TRD_RS11395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: lpdA
locus tag: TRD_RS11395
old locus tag: trd_A0486
EC number: 1.8.1.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018132819.1
GO function: GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO process: GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydrolipoyl dehydrogenase
translation: MTVEQRQEFDVVFLGGGTGGYVAAIRAAQLGLKVAVVEKDKVGGTCLHRGCIPSKALLKSAELLEQARRAKEFGVIVGEVAGDYPTAFRRAQQVVEQLHKGIHFLFRKHGITLIQGVGRLTRNRTVLVNGAEGQPQELRGRAIVIDTGSRPRAIPGIPFDGVRVLNSDHTTAQIDWYPKRVIIRGGGATGVEHATVWHAFGAEVTLVGRIVPNEDEEVQQQLVRAFQRKGIRIVPDYRPTADDFDITEGGVRMRVRKSGTQEEVIEADALFVALGREGNIEEIGLEELGVRTRDGFIVTDEYFRTNVEGIYAIGDVLGIQQLAHTAMHQGIIAVEHIAGEKPLPLDYHRVPIVTYCHPEIASLGLTEREAKEQGRAIKVGKFPFRANGKSLIEGETDGFVKIIADAETNDILGVHIIGNHATELIAEAALAKLLEATPWEIGLSVHPHPTVSEVIGEAALAVDNLAIHI
SIO_010081: TRD_RS11395
subclass of: SO_0000673
so part of: TRD_RS11395
location: complement(474743..476152)
location: region:474743-476152:-1
so has part: feature:474743-476152:-1:exon

WP_012642715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474743-476152:-1:exon

TRD_RS14385
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14385
so part of: sequence
location: 476438..476740
location: region:476438-476740:1
so has part: feature:476438-476740:1:exon
subclass of: SO_0000010

position:476438:1
position: 476438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476740:1
position: 476740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476438-476740:1:exon

TRD_RS14385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873913.1
GO function: GO:0008270 - zinc ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SWIM zinc finger family protein
translation: MQENSGKALASWREIDLAIWQRMAERARKEGVRAYRLNGDPRHWAVTSASRSGVAYEVTILDDELLCSCPGSAYYRYCKHRALVLAELGLLDPEFGVEAA
SIO_010081: TRD_RS14385
subclass of: SO_0000673
so part of: TRD_RS14385
location: 476438..476740
location: region:476438-476740:1
so has part: feature:476438-476740:1:exon

WP_081433489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476438-476740:1:exon

TRD_RS15015
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS15015
old locus tag: trd_A0487
so part of: sequence
location: complement(476659..477849)
location: region:476659-477849:-1
so has part: feature:476659-477849:-1:exon
subclass of: SO_0000010

position:476659:-1
position: 476659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477849:-1
position: 477849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476659-477849:-1:exon

TRD_RS15015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS15015
old locus tag: trd_A0487
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDRLHWPRRQAPHTRWLLLLGCALVALGPAPASAHVRWFVPEGLQLRSPQWELFWRWPTLAVIGLSAFLWAGLRLLQRALGTPHWPNPPLLASMEPCATRVLALHAGISLVWFAYQRELFVPSLELPNSLLGWALLVATVIVAFTFITALFDRAGAALLLLVYLAAFAVFPPVAVLEQLHYLGIALVLLVLGQTVPPLGVAKYLVRFTRYERHAVTALRLLTGLALVIVAFSEKLLNPELSSAFLRQYPHFNVLHSLFGWTWVSDRFFGDLAGVVEATIGILLITGVLTRVVILAMWVPFNLTVPLLPPVELLGHLPIFGIMYLLLLYGSGVAPQTAFRWLQPALTGELAAAQRRLAGEEEPSSGEPVPAQAASTPNSGSRRPSSARTSARCLQYR
SIO_010081: TRD_RS15015
subclass of: SO_0000673
so part of: TRD_RS15015
location: complement(476659..477849)
location: region:476659-477849:-1
so has part: feature:476659-477849:-1:exon

WP_041437309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476659-477849:-1:exon

TRD_RS13925
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13925
old locus tag: trd_A0488
so part of: sequence
location: complement(477954..478697)
location: region:477954-478697:-1
so has part: feature:477954-478697:-1:exon
subclass of: SO_0000010

position:477954:-1
position: 477954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478697:-1
position: 478697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477954-478697:-1:exon

TRD_RS13925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13925
old locus tag: trd_A0488
inference: COORDINATES: protein motif:HMM:TIGR02937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MRSSVTPARLSLVLLLVLPSLGYLLLDDRPAPPHLFLHRIPPPLLHAGRRRRPPQEPPDPAEPAQPEQSPSRSAPDDTLFAGLYGEHVEHLRAYLRRLGVPPSLHDDLIQETFARAWAARAQLRDRAALTTWLNRIAQRCWFDWLRAQQLEYRAFGRVLREACPRAAEDWSADRLLVEQALAKLRDRDREILYLRWEAELGFDEIADLLGISPTAAQRRAHRALVRLRQALAQRDPTGGTGGAPAPS
SIO_010081: TRD_RS13925
subclass of: SO_0000673
so part of: TRD_RS13925
location: complement(477954..478697)
location: region:477954-478697:-1
so has part: feature:477954-478697:-1:exon

WP_012642852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477954-478697:-1:exon

TRD_RS11410
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11410
old locus tag: trd_A0489
so part of: sequence
location: complement(478720..479313)
location: region:478720-479313:-1
so has part: feature:478720-479313:-1:exon
subclass of: SO_0000010

position:478720:-1
position: 478720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479313:-1
position: 479313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478720-479313:-1:exon

TRD_RS11410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11410
old locus tag: trd_A0489
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVDVLGPTMAERPRRYAVATAFLHVLASSAGGALTGGTLALLGTLLLPAVVTTQRPAVLLAAVVTALAMAEMVTGWRGPVWRQVPPARFQCGPLFASAAWGFELGTAFTTRWPTLQLVSLGLATLLSRDLVQGAALFLAFGLARGLVTAGAAYALWRPPCPVGALGVLNLQRLARAGPVALALVCAGLLLYTARTPP
SIO_010081: TRD_RS11410
subclass of: SO_0000673
so part of: TRD_RS11410
location: complement(478720..479313)
location: region:478720-479313:-1
so has part: feature:478720-479313:-1:exon

WP_012643071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:478720-479313:-1:exon

TRD_RS11415
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11415
old locus tag: trd_A0490
so part of: sequence
location: complement(479382..479945)
location: region:479382-479945:-1
so has part: feature:479382-479945:-1:exon
subclass of: SO_0000010

position:479382:-1
position: 479382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479945:-1
position: 479945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479382-479945:-1:exon

TRD_RS11415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11415
old locus tag: trd_A0490
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLPEWAVTTSLLGAWLALLGLAVVLARLAQRLQALHQVVASTVEAERERARLGQPVPPLALAGPASDQLILGVPPAAPAVVLALSQRCPPCATFWERLETLAASLAERGTLMVLAVPESDAPVGAARVPHLVGEAALAALGLSSFPSLAVVDERGHLRGRGVLRSVEEVPEIVSVLLQPPVDTVGKS
SIO_010081: TRD_RS11415
subclass of: SO_0000673
so part of: TRD_RS11415
location: complement(479382..479945)
location: region:479382-479945:-1
so has part: feature:479382-479945:-1:exon

WP_012642620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479382-479945:-1:exon

TRD_RS11420
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11420
old locus tag: trd_A0491
so part of: sequence
location: complement(479935..481725)
location: region:479935-481725:-1
so has part: feature:479935-481725:-1:exon
subclass of: SO_0000010

position:479935:-1
position: 479935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481725:-1
position: 481725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479935-481725:-1:exon

TRD_RS11420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11420
old locus tag: trd_A0491
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQRSDMRAWARPRAGAALVLVLLLALGAALAARDRLAVAAPPGQALLVSLAGPAGTEIAILDLTTGAELNRVPHPDRAYREISLSPDGRRAAVVRSEPDTLAGQVLEIRSLPDWTLEAVLPLGLQAPPLADLATREPELLANPWLASAAFSADGKLAALAFYGGSGPIPQLIVTAYDLEKRTWASWAKGLGGTSYVWLFPSRERLLVVNRSVLPQWTNSLGDVFALDPQTGRVLAQQAIPRLITAYLPVRGQSAPSMAPGLAAPVLVGNQLWLVTDDLARLILDPRTLEIRSADPPLTRDLAAQFVALAGDWLVAFSTEASELLAIDAASWQLTATHRLPEEGFPYRWHLVGSDPAQHAVYLADIAEGCLWRFPLDSGTLSAPLACGLYLEFAYVTYYHWPAFSPGTAAPLGAIGLLRHLPESLAGTATALLAGTFLVAALGKIVSLGRLAHLVATVLPRFRRWARPAALGTVALELLTGVLLLLPGTQRAGLVLAATALLAFTAFAVVGARRAPGADCSCFGNLVPSKLGRATVLRNLVLLALVAVGWPATAAPSPPDLAIAAGLLLAVLAVSRLVAAAASLRRLSPGTEPRHAA
SIO_010081: TRD_RS11420
subclass of: SO_0000673
so part of: TRD_RS11420
location: complement(479935..481725)
location: region:479935-481725:-1
so has part: feature:479935-481725:-1:exon

WP_012642748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479935-481725:-1:exon

TRD_RS11430
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11430
old locus tag: trd_A0492
so part of: sequence
location: complement(482304..483674)
location: region:482304-483674:-1
so has part: feature:482304-483674:-1:exon
subclass of: SO_0000010

position:482304:-1
position: 482304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483674:-1
position: 483674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482304-483674:-1:exon

TRD_RS11430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11430
old locus tag: trd_A0492
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDITRAHPHRTGYGSRHSLLERLTTAMVSGVALRHPRHAITASAAALAVSLFLVFALAVPRSPAGLLNTAGNGAPDQSRPRLLTFAAEPADAMTGIFGSRLVLLDLSTGEVVDSYSDASDVSAAALSPAGDLVVLKRRELAGETWRDRLEVRRIPDWSLATVLPLDSGIPPVRALAREFPAAATEPPVLQRMVIAPSGKWAAAWLTSTTGSLPGGGGSFVTWITTLDLAAGSWANWALPLPGAQAASLLALPDKLVVMSSGISSPRQPTVASLLLVDPATGRIEARQELAPLEWTAKPARHESTLVTYPSALPPALWGPQLVVVTEDLQGFVLDAETLAVHARYPALSESRRVGWRASVVGDRAALVGHDEVIILDLVRWSLDRAYPLPQLPENLWQPVGTDLERGVLWLTATSNGCLYQLSLDQGTLSEPLRCGLAAGWPHSTEGWPVSNAETP
SIO_010081: TRD_RS11430
subclass of: SO_0000673
so part of: TRD_RS11430
location: complement(482304..483674)
location: region:482304-483674:-1
so has part: feature:482304-483674:-1:exon

WP_012642461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482304-483674:-1:exon

TRD_RS11435
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11435
old locus tag: trd_A0494
so part of: sequence
location: complement(484294..485505)
location: region:484294-485505:-1
so has part: feature:484294-485505:-1:exon
subclass of: SO_0000010

position:484294:-1
position: 484294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485505:-1
position: 485505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484294-485505:-1:exon

TRD_RS11435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11435
old locus tag: trd_A0494
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012642899.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLAQFTGRADGRPVSRPLVKLLVLLIVSFPALAATPLLRPNDRLAARPEPAPALILAQTATHSLVLDARSGQIVSQQPGTSAILAADPGGRLVLSITYDRVTVSRLPSWSTVHVLSIDSEIPPAQAVRRAFPALGDDSPRPYAAEVSPDARYAAVGFVSMAPEPSSWWILWVATLDLERGTWASWALPVPGAHYAYLLPASNHLFVLARDNAVANFDTAGSLYRLDPDTGTLQGQVVLRSAEPGFAPIAGTAAARVPAVTGAHLGTNTLAVLTERLELFVFDPTTLRRVEHRAPISAEILAREIAWLDDDRVIALTQTEELVMVDLASATIATRLPLSGLFGTQLVGADPTTGDVLVMGYPIASEPGSACLYRFGLDGTRDTLSCGLDLNLYERRFARTGPLS
SIO_010081: TRD_RS11435
subclass of: SO_0000673
so part of: TRD_RS11435
location: complement(484294..485505)
location: region:484294-485505:-1
so has part: feature:484294-485505:-1:exon

WP_012643131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484294-485505:-1:exon

TRD_RS11440
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11440
old locus tag: trd_A0495
so part of: sequence
location: complement(485535..486839)
location: region:485535-486839:-1
so has part: feature:485535-486839:-1:exon
subclass of: SO_0000010

position:485535:-1
position: 485535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486839:-1
position: 486839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485535-486839:-1:exon

TRD_RS11440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11440
old locus tag: trd_A0495
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDRTLPTVSPRRTTGLLLASSAVLLVSLIAASLTRIGVPSRSLPHLGAAPNAIVRPLVLLPVGTTDDPRLAARTTGLVLVDARSGAILDRHAVADSTEVLSASFVSPGDRIVFYTGEHTGPHARLEVRRLPGWDIESVVTIEASIPPARVLAERFPSISASDPTLLAFAAEPQGRWAAVAFWSLITPKPDGPSSQLVWVTMVDLERAVWAGWASPLPSSQAASLVALPDRILVLGHELRTSSRRSVGTVVALDPQSGEALGQLTLESASTTAKPLGEGPDDEQATFSTALDPVLWNGQLLVVTTDLEAFVIDPSALTVTAHYPPLADRLVAAGRPFITGDRLVVGGGAVRVIDISSWRLLATHPLPQMPETWWIAAGLVDQETLLLTGTREGCLRHLDLATSRLSAPLACGFLVDYPAPLFGWPVFFAGSSGP
SIO_010081: TRD_RS11440
subclass of: SO_0000673
so part of: TRD_RS11440
location: complement(485535..486839)
location: region:485535-486839:-1
so has part: feature:485535-486839:-1:exon

WP_012643240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485535-486839:-1:exon

TRD_RS14725
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14725
so part of: sequence
location: complement(486900..487352)
location: region:486900-487352:-1
so has part: feature:486900-487352:-1:exon
subclass of: SO_0000010

position:486900:-1
position: 486900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487352:-1
position: 487352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486900-487352:-1:exon

TRD_RS14725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14725
inference: COORDINATES: protein motif:HMM:NF014969.2
GO component: GO:0042597 - periplasmic space [Evidence IEA]
GO function: GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO process: GO:0009308 - amine metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methylamine dehydrogenase light chain
translation: MALPPAPPAHWPKRPRSRRAWLKGLVAALLTTWTLLRDEQDLVAQTSCSQWHRCGMCGCLCSCLGGSDSACPSGTQEGGAWWACYFSSGRLWLVRYLDCCGPRDRRPACPSGCSCNQNNSCGQYPSNQNWCPNPSTRAAYCTRAQVWSQC
SIO_010081: TRD_RS14725
subclass of: SO_0000673
so part of: TRD_RS14725
location: complement(486900..487352)
location: region:486900-487352:-1
so has part: feature:486900-487352:-1:exon

WP_143714793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486900-487352:-1:exon

TRD_RS11445
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11445
old locus tag: trd_A0497
so part of: sequence
location: complement(488068..489243)
location: region:488068-489243:-1
so has part: feature:488068-489243:-1:exon
subclass of: SO_0000010

position:488068:-1
position: 488068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489243:-1
position: 489243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488068-489243:-1:exon

TRD_RS11445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11445
old locus tag: trd_A0497
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012643131.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRPIPWPPAWLLASALLVALSALLASQQPRLTAWLVTQPEPLRPTVIAQTSTHLVALDARSGEVIADHPGGAAVLAASPTGERVLALTEEEATVYRFPGWTVEHTVALGPSMPPAQSLPALREAWPRPVVAQVSADSRYAAVSLVSMGTPPAYPWILWVTTLDLERGTWASWAFPVPGAQYTYLVAGSEHLFVVARDNAVSRLDTVGSVYQLDPASGTLLQKRELRSTDPGFAPFPDGPGGRVPSVAGVRLSGCTLDVVTERLELFRFDAATLQLIEQRPPLSAAILTWQVAWLGPDRLALLTHTDALAIADLAERTLTTRLSLEGLAGEQLAGADPATDSVLLLAYDERSLQAAACLFRLTLTGERTTLACGLDLNLYERRFAPTGGLS
SIO_010081: TRD_RS11445
subclass of: SO_0000673
so part of: TRD_RS11445
location: complement(488068..489243)
location: region:488068-489243:-1
so has part: feature:488068-489243:-1:exon

WP_226980740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488068-489243:-1:exon

TRD_RS11450
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11450
old locus tag: trd_A0498
so part of: sequence
location: complement(489568..490167)
location: region:489568-490167:-1
so has part: feature:489568-490167:-1:exon
subclass of: SO_0000010

position:489568:-1
position: 489568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490167:-1
position: 490167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489568-490167:-1:exon

TRD_RS11450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11450
old locus tag: trd_A0498
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVSFTFMTGRFDRAGAALLALVYLAACLLFPPVAVLEQLPYFGIAVTLAAVGQTVLPVAAAQRLLPLAREEGHAISALRVKVGLSLLVVAFSEKLLNPELGDTFLRAYPYFNVVGTLFGWTWFSDRLFGDIAGIVVATIGILLLTGVLTRVVILAMWVPFNLTVPLLPPIDLLSHLPIFGIMSLLLLYGASVAPRSVLR
SIO_010081: TRD_RS11450
subclass of: SO_0000673
so part of: TRD_RS11450
location: complement(489568..490167)
location: region:489568-490167:-1
so has part: feature:489568-490167:-1:exon

WP_012642553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489568-490167:-1:exon

TRD_RS11455
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11455
old locus tag: trd_A0500
so part of: sequence
location: 490469..490672
location: region:490469-490672:1
so has part: feature:490469-490672:1:exon
subclass of: SO_0000010

position:490469:1
position: 490469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490672:1
position: 490672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490469-490672:1:exon

TRD_RS11455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11455
old locus tag: trd_A0500
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNQRTCLATVIGQSAMMPAEIGSDQCEGHLRWSADPAGFERSLPGGLSVTSGPIVNASSAVLLAGFC
SIO_010081: TRD_RS11455
subclass of: SO_0000673
so part of: TRD_RS11455
location: 490469..490672
location: region:490469-490672:1
so has part: feature:490469-490672:1:exon

WP_012642812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490469-490672:1:exon

TRD_RS11465
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11465
old locus tag: trd_A0502
so part of: sequence
location: complement(491945..493156)
location: region:491945-493156:-1
so has part: feature:491945-493156:-1:exon
subclass of: SO_0000010

position:491945:-1
position: 491945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493156:-1
position: 493156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491945-493156:-1:exon

TRD_RS11465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11465
old locus tag: trd_A0502
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDAVRTSADRSTRPLGLVPTAALLVVVVTLAAGLLFAALPRFSAGSADLSQGVKTTIIAQTGSELLALDPRSGQVLTQRPGAAAVIAVSADTRTVLAQIGEAIHVYRLPDWEERFRIPLTTEITPVAALARQFPDFGAEPPRLFQAAVAPDGRFAVLGFTSYGTKPDARFFDTLPWVIWVAGLDLKTGRWSDWAFPVPGAQNLTLLATSESLLVLSHDNQLSRGGHIGTVYHLDPASGALRARATLVPEIPGAALIAGTEAARAPGIAGARISDARLVVVTEQLEVFVLDPVTLRLVEHHRPLSENILARETLILPNRVVALTHTDELLVVDRNRHAVVARQPVEADELVAFDPEDNAALVMTWQDRGACLERIESSGDRHTLRCGLDTNPYEPRYAVGGLP
SIO_010081: TRD_RS11465
subclass of: SO_0000673
so part of: TRD_RS11465
location: complement(491945..493156)
location: region:491945-493156:-1
so has part: feature:491945-493156:-1:exon

WP_041437314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491945-493156:-1:exon

TRD_RS11470
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11470
old locus tag: trd_A0503
so part of: sequence
location: 493432..494547
location: region:493432-494547:1
so has part: feature:493432-494547:1:exon
subclass of: SO_0000010

position:493432:1
position: 493432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494547:1
position: 494547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493432-494547:1:exon

TRD_RS11470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11470
old locus tag: trd_A0503
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008880857.1
GO function: GO:0046912 - acyltransferase activity, acyl groups converted into alkyl on transfer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: citrate/2-methylcitrate synthase
translation: MMVARGLEGVVAGTTRLSSIIDGTLAYVGIDIDELAANASYEEVVYLLYHGELPTRTQLEALQGELARQRALPEGVVRLLADAPRVVPMDLLRTAVSALAWYEVDPNTVERQAAIAKGLRLVAQVPTIVATIGRLRRGLAPVAPPADEPSTARAFLRTLHDREPSELEVEAMNKILVLHADHEFNASTFAARVVAATLADMHAAVTAATAALKGPLHGGANAAVMQMLEEIGTLDRVEPYITEKLARKERVMGFGHRVYKGEDPRAKWLRDLSRRLGEARGDLRWYELSVAIAEVMQREKGLFPNVDFYAASVYHYLGIEKELMTPVFAASRIAGWTAHVLEQQADNRLIRPRAEYVGPTNRHYVPLEQRG
SIO_010081: TRD_RS11470
subclass of: SO_0000673
so part of: TRD_RS11470
location: 493432..494547
location: region:493432-494547:1
so has part: feature:493432-494547:1:exon

WP_041437720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493432-494547:1:exon

TRD_RS11475
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11475
old locus tag: trd_A0504
so part of: sequence
location: 494616..495524
location: region:494616-495524:1
so has part: feature:494616-495524:1:exon
subclass of: SO_0000010

position:494616:1
position: 494616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495524:1
position: 495524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494616-495524:1:exon

TRD_RS11475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11475
old locus tag: trd_A0504
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: type II secretion system protein E
translation: MERWRRPPDPELTEFPPADWWGRYGARATGDLSLVDLVRLGSLDAATAAFLWIALEQRASVIVAAREHGAGKTTLLTALADLLPEGTTCYYLRGWYERFAFASELDPEKTYLLVNEISDHLPIYLWGKGVRRLFALLAGGWRLGATVHAQGADEVLALLNSFPLEVPVEHLVALDLVVTLGMGVTSEGLLRRVVRVEAIRAPENRSTIQLLALRETLRSPLAVYPSVFLETLHDRFGMRVEVASRELARRQRRIARWVAEGLRGRDAFRNVLAAERRHSTEGVDGLPARSSIEEALHHDEVD
SIO_010081: TRD_RS11475
subclass of: SO_0000673
so part of: TRD_RS11475
location: 494616..495524
location: region:494616-495524:1
so has part: feature:494616-495524:1:exon

WP_012643292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494616-495524:1:exon

TRD_RS11480
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11480
old locus tag: trd_A0505
so part of: sequence
location: 495551..496951
location: region:495551-496951:1
so has part: feature:495551-496951:1:exon
subclass of: SO_0000010

position:495551:1
position: 495551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496951:1
position: 496951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495551-496951:1:exon

TRD_RS11480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11480
old locus tag: trd_A0505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015440314.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MERPRTLGELRESGYRVLPVREEMRKNLIAKIQAGEPIFPGIIGYEETVIPQVENAILAGQDIIFLGERGQAKTRMARLLVNLLDEEIPIVAGSEVNDNPFDPISKYARDLIAEMGDETPIAWIRREERYAEKLATPDTTIADLIGEVDPIKVAEGRYLSDELTIHYGLIPRTNRGIFVINELPDLAERIQVGLLNIMEERDVQIRGYRVRLPLDVFVVASANPEDYTNRGRIITPLKDRFGAQIRTHYPRTIEHEIAIMEQERMPVEVPGITVTVPQYMREIVAEITHLARRSPDISQRSGVSARMSVANYETLISNAVKRALRLGEKHAVPRISDLPALVASTLGKLEFETLGEVQEDRIIEKLINGAVVATFNRYFSVRDFDDLILAFENGLTVEASDLQPAMRYVHQVAHIESLRRATQRLGATGDPALVAAAVEFVLEGLHLNRRVNKERATGGGAARYRS
SIO_010081: TRD_RS11480
subclass of: SO_0000673
so part of: TRD_RS11480
location: 495551..496951
location: region:495551-496951:1
so has part: feature:495551-496951:1:exon

WP_012643106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495551-496951:1:exon

TRD_RS11485
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11485
old locus tag: trd_A0506
so part of: sequence
location: 496977..499076
location: region:496977-499076:1
so has part: feature:496977-499076:1:exon
subclass of: SO_0000010

position:496977:1
position: 496977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499076:1
position: 499076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496977-499076:1:exon

TRD_RS11485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11485
old locus tag: trd_A0506
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012875808.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VWA domain-containing protein
translation: MAGTPNRFRYSRWDGTQEIAAFTAEELLEAMADDLLAEGDVNRALQRLFRWGMDRPDGRMPGFRELLERIRQRRQQLLQRYDLGSVLDDLNQRLDEVIQTERAGIERRVQEGRERLARARERVAPVSEAGEEGQTQSNEGETGDDAPTDPALQRLLERMAQQKLAFLDQLPADPAGRIRALSDYEFMDPEARRKFQELLASLQRQVLEQTFQGLQQAIQNVTPEALRELRQMLRDLNELLREHAQGGQPDLERFKHRWGHYFGRDFNSVDELLDHLARQMAAVQSLLDSLPPEMRQQLEQALEAALRDPELQQELRQLGRLLGQLMPENPYRQAQPFSGSEELTLSQALRLMEQLREMQDIEEQLESVRDWRDLGRVDLERLRELYGDELAAQLDALRQITRLLEEAGYIQRTRRGYELTPRAIRRIGQKALREIFQHLKRNRFGQHQIERSGRGSEPLEETKAYEFGDPFLLHLPRTVMNAIQREGPGTPVRLQPADFEVFRTETVTRAATVLMVDMSRSMLYNGCFLAAKKVALALDSLIRTQFPRDVLYIIGFSYLASVLEPEELPHITWDEYNYGTNMQHGFMLARQLLARHRGGTRQIILITDGEPTAYFDGEQVRFSYPPTYQTFQETLKEVARCTREEIVINTFMLERSPYLASFVNEMTRINKGRAFFATPDHLGEYIVMDYVANKRFRLR
SIO_010081: TRD_RS11485
subclass of: SO_0000673
so part of: TRD_RS11485
location: 496977..499076
location: region:496977-499076:1
so has part: feature:496977-499076:1:exon

WP_012642819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496977-499076:1:exon

TRD_RS11490
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11490
old locus tag: trd_A0507
so part of: sequence
location: 499086..499451
location: region:499086-499451:1
so has part: feature:499086-499451:1:exon
subclass of: SO_0000010

position:499086:1
position: 499086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499451:1
position: 499451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499086-499451:1:exon

TRD_RS11490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11490
old locus tag: trd_A0507
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRRLTGRGSASPSAPDGEGSVPHVEAEVFQAHATSSTGETLVYRYEDILRAVGRFIDEEQLTDVVIVQTETGVLVRGMRRPHAGTRLASTFCERLFSKAEIAAILEEGRRRRGTGSKLFQ
SIO_010081: TRD_RS11490
subclass of: SO_0000673
so part of: TRD_RS11490
location: 499086..499451
location: region:499086-499451:1
so has part: feature:499086-499451:1:exon

WP_143714796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499086-499451:1:exon

TRD_RS11495
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11495
old locus tag: trd_A0508
so part of: sequence
location: complement(499455..500234)
location: region:499455-500234:-1
so has part: feature:499455-500234:-1:exon
subclass of: SO_0000010

position:499455:-1
position: 499455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500234:-1
position: 500234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499455-500234:-1:exon

TRD_RS11495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11495
old locus tag: trd_A0508
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873926.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin/lipoate A/B protein ligase family protein
translation: MTELERWKRYRWQLIAGEAFDPALQMALDEVLTRRVGAGERPPTLRFWEWTAPAVVIGRFQSLRNEVDFAEAERYGITVVRRITGGGAMLTEPGKVITYSIYAPPELVAGMSFQESYAFLDRWVVEALRALGVDAWYQPINDIASARGKIGGAAQARRYGAVLHHTTMAYDIDPEKVPRVIRIGREKLSDKGVPSAAKRVAPLRQQTDLPREVIQEHLIRTFAERHGLEEGMLLPEEIEEARELVRTKFGTWEWTAILP
SIO_010081: TRD_RS11495
subclass of: SO_0000673
so part of: TRD_RS11495
location: complement(499455..500234)
location: region:499455-500234:-1
so has part: feature:499455-500234:-1:exon

WP_012643033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499455-500234:-1:exon

TRD_RS11500
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11500
old locus tag: trd_A0509
so part of: sequence
location: complement(500231..500518)
location: region:500231-500518:-1
so has part: feature:500231-500518:-1:exon
subclass of: SO_0000010

position:500231:-1
position: 500231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500518:-1
position: 500518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500231-500518:-1:exon

TRD_RS11500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11500
old locus tag: trd_A0509
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006219159.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin/lipoate A/B protein ligase
translation: MRHGEYKTPGGKLVQVDCEVIDGRLHHVQVTGDFFLEPPEALDAIAQALEDAPVDASEEELAQRIQRALERFGDGLELLGFSPEAVARATRRAIE
SIO_010081: TRD_RS11500
subclass of: SO_0000673
so part of: TRD_RS11500
location: complement(500231..500518)
location: region:500231-500518:-1
so has part: feature:500231-500518:-1:exon

WP_012642880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500231-500518:-1:exon

TRD_RS11505
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11505
old locus tag: trd_A0510
so part of: sequence
location: 500724..501263
location: region:500724-501263:1
so has part: feature:500724-501263:1:exon
subclass of: SO_0000010

position:500724:1
position: 500724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501263:1
position: 501263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500724-501263:1:exon

TRD_RS11505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11505
old locus tag: trd_A0510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873748.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YIP1 family protein
translation: MVQAGVIERALGAARLDAKAYESVERDEAATGTALAIVVLSAIASGIGNLRDAGILGLIGGVIFGVIGFILYAGIAYLIGGKLFATSETRVTLGQLLRTLGFAQAPGVLYVLGLLPGVGGLIRFVIGIWILVASIIAIRQACDFSTGRAILTAFVSWIAYFLFVVVPAAILGALFGALT
SIO_010081: TRD_RS11505
subclass of: SO_0000673
so part of: TRD_RS11505
location: 500724..501263
location: region:500724-501263:1
so has part: feature:500724-501263:1:exon

WP_012643226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500724-501263:1:exon

TRD_RS11510
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11510
old locus tag: trd_A0511
so part of: sequence
location: complement(501382..502221)
location: region:501382-502221:-1
so has part: feature:501382-502221:-1:exon
subclass of: SO_0000010

position:501382:-1
position: 501382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502221:-1
position: 502221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501382-502221:-1:exon

TRD_RS11510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11510
old locus tag: trd_A0511
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012870741.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon-nitrogen hydrolase family protein
translation: MSDLLRIGLVQMNSRSDKSENLAVAERLIEEAARQGAELVALPEYVNFLGPRELHEANAEPIPGPTTERFAALARRYGIYLLGGSILERSAIPGKYYNTSVLFAPDGEIIASYRKIHLFDVDLTGNVTSNESATILPGDRVVTAEVAGHVVGLTICYDLRFPELYRLLALDGAELILVPAAFTLYTGKDHWHTLLRARAIENQCYVAAPAQIGPHDPGQQCYGHSLVADPWGTVIAEAINRVGVVVTTLDFAYLREVRAQLPSLANRRPETYGSLALTR
SIO_010081: TRD_RS11510
subclass of: SO_0000673
so part of: TRD_RS11510
location: complement(501382..502221)
location: region:501382-502221:-1
so has part: feature:501382-502221:-1:exon

WP_012642565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501382-502221:-1:exon

TRD_RS11515
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11515
old locus tag: trd_A0512
so part of: sequence
location: 502508..503017
location: region:502508-503017:1
so has part: feature:502508-503017:1:exon
subclass of: SO_0000010

position:502508:1
position: 502508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503017:1
position: 503017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502508-503017:1:exon

TRD_RS11515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11515
old locus tag: trd_A0512
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRHARQALFLALVAVLVTVTGAKALDADSPEYALRDAAGNNFRSIARVRHTPYSDHILVQSFGLRVNVMTVGHRAVCEDYRWTRSAPAPYNGRFWDNGAPFPLYYWNTPQWTYEAFGQRMYWGGPNTPVWIEHTTSGEDICGSSAGLLRAAGIKSYRCPTYWYWRAMTR
SIO_010081: TRD_RS11515
subclass of: SO_0000673
so part of: TRD_RS11515
location: 502508..503017
location: region:502508-503017:1
so has part: feature:502508-503017:1:exon

WP_012642769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502508-503017:1:exon

TRD_RS11520
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11520
old locus tag: trd_A0513
so part of: sequence
location: 503082..504269
location: region:503082-504269:1
so has part: feature:503082-504269:1:exon
subclass of: SO_0000010

position:503082:1
position: 503082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504269:1
position: 504269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503082-504269:1:exon

TRD_RS11520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11520
old locus tag: trd_A0513
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAMLLAVPLVLGCGPAESPRATGLPVETRASGIRIRLTDVQARLIGTVLRLELRREMATRPSETFLPITAEMLDVTGFVGDERLWGSLVSYPERDGWLPVDLLVGYRPAEPGEATVTIEWLLVAPESGFNGSPRRIEGPWTFVLPRSVFDRAAVAPTVFAVEREIATDHPDLRIVLHRLLSSQAGTGIVYRLETGKLGPSNVLENGLRVRLSNGGLMEASGEWPLPDGSRVAEFPPLGEQTRAFAVEWYPWVVAHPEPVRIELDLSPLWAVPEGAIVPLGTAFELGGEPLTVTSVQRRGDEMVLVVRNQLDPEARRRLLVGPVWEGIVLRADTGKVYRNIGGSTGLERDERGGVFAGASTLEFELPPVGTQRVWLEVPVTGRLVRAPAVTLALDE
SIO_010081: TRD_RS11520
subclass of: SO_0000673
so part of: TRD_RS11520
location: 503082..504269
location: region:503082-504269:1
so has part: feature:503082-504269:1:exon

WP_012642872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503082-504269:1:exon

TRD_RS11525
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11525
old locus tag: trd_A0514
so part of: sequence
location: 504831..506882
location: region:504831-506882:1
so has part: feature:504831-506882:1:exon
subclass of: SO_0000010

position:504831:1
position: 504831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506882:1
position: 506882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504831-506882:1:exon

TRD_RS11525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11525
old locus tag: trd_A0514
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012872936.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydantoinase/oxoprolinase family protein
translation: MVRVGVDTGGTFTDFVVLEGTSFRLHKEPSTPDDPARAIVRGLERLGVLSALRELLHGSTVATNAILERKGTRTALVTTAGFRDVLEIGRQNRPRLYDLRQTKPPPLVPRALRFEVRERLDERGGVLVPLVDDDLHSVVAELRVAGVESVAVCLLFSFVNPEHEKRVAEFLRARGFLVSASHEISPEYREYERTSTTVLNAFVAPVMGRYLERLAASLPAGCALDIMQSNGGLVSAAVAGREAVRTILSGPAAGAIGARAVAARSGFSRVISFDMGGTSTDVCLIDGTPSERSEGEIAGHPVRVPMLDIHTVGAGGGSIAWFDTGGVLRVGPQSAGAVPGPAAYGRGGSEPTVTDAAVVLGWLLPDAFLGGEMRLEVDRARDAIGRVARVLGARLEEAAWGILEVAQAKMVGAIRVITVERGKDPREYGLVGFGGAGPMVACLLASALHIPYVLIPPHPGTLSALGLLTADRLRDYTRSLMLEVSEPAATSAVSQAFAALEAEALRDAAADRTTPDQLLFHRALDMRYARQSYELTIPYQSSLAETVRAFHTAHQDRYGYAMPGEPVMVVSARLRASAPSPAELPPPEPITELWAPKAIDERVVFFGTDDRVAPHRVPHYRREELGPGALLVGPALVTQYDSTIVIPPGWRGFVDGGTSIVLRQRGGGVDLLTGKHHDSEAGR
SIO_010081: TRD_RS11525
subclass of: SO_0000673
so part of: TRD_RS11525
location: 504831..506882
location: region:504831-506882:1
so has part: feature:504831-506882:1:exon

WP_012643214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:504831-506882:1:exon

TRD_RS11530
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11530
old locus tag: trd_A0515
so part of: sequence
location: 506879..508480
location: region:506879-508480:1
so has part: feature:506879-508480:1:exon
subclass of: SO_0000010

position:506879:1
position: 506879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508480:1
position: 508480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506879-508480:1:exon

TRD_RS11530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11530
old locus tag: trd_A0515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008475077.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydantoinase B/oxoprolinase family protein
translation: MSGEARVDPISLAVFAAAVSAIAEEMGAALQRSSYSPNIKERLDFSCAIFDPAGQMLAQAAHIPAHLGSMPDSVRAVIEHCAPFAPGDVVVLNDPYLGGNHLPDITMVTPVFLDDSGSVLLGYVANRAHHADVGGISPGSMPIATELYQEGIIIPPIKLWQRGQLNEAALALILRNVRTPEERRGDLLAQYAANRTGVRRVRELVARYGFASYQALSAALLDYGERLARAAICQIPPGSYSFTDYLDDDGVSEEPVAITATITVDGEVLEVDFTGTSSERPGSINTVETVTKSAVYYVLRCLMPEDAPMNHGVFRTVRVIAPVGTVVNARPQRAVAGGNVETSQRIVDVLFGALATALPDVIPAASQGTMNNLTIGGRDPRTGTPFAYYETMGGGMGARPGLDGLSGVHVHMSNTRNTPVEALEYAYPLRVVRYSMRDGSGGRGAARGGDGLVRELEFLTSAEVTLLTERRRFAPWGLQGGEPGATGRNLLITHLPDGREQEVPLRGKQRLTVRPGDRLRIETPGGGGWGTPH
SIO_010081: TRD_RS11530
subclass of: SO_0000673
so part of: TRD_RS11530
location: 506879..508480
location: region:506879-508480:1
so has part: feature:506879-508480:1:exon

WP_012643177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506879-508480:1:exon

TRD_RS11535
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11535
old locus tag: trd_A0516
so part of: sequence
location: 508787..510232
location: region:508787-510232:1
so has part: feature:508787-510232:1:exon
subclass of: SO_0000010

position:508787:1
position: 508787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510232:1
position: 510232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508787-510232:1:exon

TRD_RS11535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11535
old locus tag: trd_A0516
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSGARYTGEPAPQRPPACPYFRLLVDPEAHALSLGEQRVCAADHRPLTDLAWQASYCLGSFDQCPRLRLARGEPDPQPGSYLLDLLASQRAWTPAGIGSVGPTGGTAPAAGASLVGSRTGPTVALRQRLIELTRRPLVVAVLTTALLGGLWAGIALANSLVTNRPAVDAGQRTVTSAPAFTLRTDRPAPTPTPLPAPAQLPGLPVLSASRASTPTPTPVPRPSPTVTPTHEPMPTPSPALASTPSPAVVAPNAPVVPPRTSPPSVTPTPVPHPEPTPEATPAVWPWPSVSPPVAATPVLTATPSPTPSPTPDPWRDLPPMARMGQPVPVASIGGVLGTLTPYAFAGNNLAGAAPADSDAVAHLSLPATAAVLYGTQSGASQGRIWLNPSSSVQRLVLVAEGMTNPGSLAPVLRIGINGLTVWEGVSPFPHGEWGTFAWMIDKSQLLAGSQLTISLSLATPGDYGTEPWVALATVTVYVDS
SIO_010081: TRD_RS11535
subclass of: SO_0000673
so part of: TRD_RS11535
location: 508787..510232
location: region:508787-510232:1
so has part: feature:508787-510232:1:exon

WP_012642517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508787-510232:1:exon

TRD_RS11540
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11540
old locus tag: trd_A0517
so part of: sequence
location: complement(510252..510998)
location: region:510252-510998:-1
so has part: feature:510252-510998:-1:exon
subclass of: SO_0000010

position:510252:-1
position: 510252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510998:-1
position: 510998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510252-510998:-1:exon

TRD_RS11540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11540
old locus tag: trd_A0517
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016329762.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF554 domain-containing protein
translation: MEFVDFWSRTSGTWINATTVAVGTAFGLLLHGRLPERMQRIAVQGVGLTTVFIALSMAGSLGKATVGRFDGVVLGLVTLVLGGLLGEWWRVEEGLETLGNWIKRRVGGGGSFTEGFVAASLLFCVGPMTLIGSLNNGLTGDATLLVIKATLDGISSVALASAYGVGVGFSILVILLYQGGVSLAAGALAQMLPDPANDPRILLVTGVGGVMMIGIAINLLGLGRVRVASFLPALVLGPFVSALARWLS
SIO_010081: TRD_RS11540
subclass of: SO_0000673
so part of: TRD_RS11540
location: complement(510252..510998)
location: region:510252-510998:-1
so has part: feature:510252-510998:-1:exon

WP_041437316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510252-510998:-1:exon

TRD_RS11545
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11545
old locus tag: trd_A0519
so part of: sequence
location: 511183..512316
location: region:511183-512316:1
so has part: feature:511183-512316:1:exon
subclass of: SO_0000010

position:511183:1
position: 511183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512316:1
position: 512316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511183-512316:1:exon

TRD_RS11545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11545
old locus tag: trd_A0519
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012872938.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VIT1/CCC1 family protein
translation: MTDAHDAIARYRKNLQDEIDSAALYRGLAEAERSPELREVFLRLAAMEEEHARFWEQKLRELGVPVPQLRPGWRTRVLIALARHLGAALVLPTVTAREWADQAKYDAQPEAAVTALPATEHQHARLLQLIGRERPSGLPGSSLAILEGRHRAVGGNALRAAVLGANDGLVSNLSLVMGVAGADLAPKAILLTGIAGLLAGSLSMAMGEWLSVQSARELFEHQIRIEREELIAFPEEEREELELIYRAKGVPADTAQELADRLIREGAPALETLVREELAIDPEELGGSAWEAAIASFLLFSIGAIVPVLPYIAWGGIPAAVASVVLSGLALFLLGAGITVITGRSALRSGLRQVLIGLAAAAITFGVGRLFGVALAG
SIO_010081: TRD_RS11545
subclass of: SO_0000673
so part of: TRD_RS11545
location: 511183..512316
location: region:511183-512316:1
so has part: feature:511183-512316:1:exon

WP_012642386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511183-512316:1:exon

TRD_RS11550
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11550
old locus tag: trd_A0520
so part of: sequence
location: complement(512364..513758)
location: region:512364-513758:-1
so has part: feature:512364-513758:-1:exon
subclass of: SO_0000010

position:512364:-1
position: 512364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513758:-1
position: 513758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512364-513758:-1:exon

TRD_RS11550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11550
old locus tag: trd_A0520
inference: COORDINATES: protein motif:HMM:NF013714.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-binding oxidoreductase
translation: MSHRNVFHTWHGEERALDPSALDAFRTALQGNVRTPGDAGYDEARAVWNGTIDRHPALIVSAQTIEDVQQVIAFAQQHEIVLAVRGGGHSFAGHSTCDGGIVLDLAPMRHLRVDPARRLAMASPGLRWADLDAATQQHGLAVTGGQISHTGIAGLTLGGGMGWLARQVGLTIDHRVSADIVTANGTLRRAAPDADVDLYWAIRGGGGNFGVATSFTFRLQPVGPEVSVYQLAFPVEVAAQVFSEAEKLLEASPPSLSATFAFLTTPEGMPVAALTLVSTASSELTAQSFAPFRGLGTPVFEETVRVPYTALQRMLDQVAAPGLRYYGRGNFLDTLDPLVIEPLATAYAEAPSPQSLVLFVRLGGAVTAIPMEATAFAHRNRPWAVTALAIWRDPADDDTNRTWIERAWSALPALPKAVYVNELGDEGNERVRAAYGPNYERLSQLKRRYDPNNLFRLNQNIRPA
SIO_010081: TRD_RS11550
subclass of: SO_0000673
so part of: TRD_RS11550
location: complement(512364..513758)
location: region:512364-513758:-1
so has part: feature:512364-513758:-1:exon

WP_012642510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512364-513758:-1:exon

TRD_RS11555
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11555
old locus tag: trd_A0521
so part of: sequence
location: complement(513889..514848)
location: region:513889-514848:-1
so has part: feature:513889-514848:-1:exon
subclass of: SO_0000010

position:513889:-1
position: 513889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514848:-1
position: 514848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513889-514848:-1:exon

TRD_RS11555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11555
old locus tag: trd_A0521
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012872939.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase
translation: MPKEIRGIVVGSRNAAVGFPRAIEILRGGGSALEAAIAAVKAVEDDLCDQGVGTGGIPNILGEVELDASVMDGRTLAAGAVGALKHYPHPIEVARRIMECTPHVMLVGEGAELFARTHGFQPANLLTPEAEAIWRAVIHGERRTEHNVYEDRYQLYMSVVQRWRELLHRELFGTTNVIVRDLAGNIACAVSTSGWGFKWPGRLGDSPIIGAGNYADNRYGAAACTGRGEMAIRCATAHSVVMYLRFGFTLEDALRQAMLDLRALDDPYAEADTVMNIVAMDRDGNVSAASTSPEATYVVQTIDMETYEERPRLHVPLRE
SIO_010081: TRD_RS11555
subclass of: SO_0000673
so part of: TRD_RS11555
location: complement(513889..514848)
location: region:513889-514848:-1
so has part: feature:513889-514848:-1:exon

WP_012643150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513889-514848:-1:exon

TRD_RS11560
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11560
old locus tag: trd_A0522
so part of: sequence
location: complement(514858..515508)
location: region:514858-515508:-1
so has part: feature:514858-515508:-1:exon
subclass of: SO_0000010

position:514858:-1
position: 514858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515508:-1
position: 515508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514858-515508:-1:exon

TRD_RS11560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11560
old locus tag: trd_A0522
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: PRC-barrel domain-containing protein
translation: MRVCFGDRLWTRDGQEAGTVEWLLIDPQRLRVNALVIRRGLILRHSLVVPLDAIAREETGTRLILRYTSRELDQLPEFHRELYTGQAAWQLTGERASPFFIPGWLPPASLYEPPPPSPEVIELGEIVRTIDQANAVLHRGATVITAEGERVAHLHDLCAEIPGGRLLHVRVRYGLPPHDLDIPVDAVSSADDGVLYLRWWRDEFERAAHGATGTER
SIO_010081: TRD_RS11560
subclass of: SO_0000673
so part of: TRD_RS11560
location: complement(514858..515508)
location: region:514858-515508:-1
so has part: feature:514858-515508:-1:exon

WP_012642763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:514858-515508:-1:exon

TRD_RS11565
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11565
so part of: sequence
location: 515909..516742
location: region:515909-516742:1
so has part: feature:515909-516742:1:exon
subclass of: SO_0000010

position:515909:1
position: 515909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516742:1
position: 516742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515909-516742:1:exon

TRD_RS11565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11565
inference: COORDINATES: protein motif:HMM:NF012730.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: potassium channel family protein
translation: MQRLRRFAPWLYEGGMAALAIIAVWLLTLPSTPAVERASQAIWVVFVADYAWRLARARDRRRFMREHVIELVAILPWDWFRIARVLRLVRLLRAGIWFWRATQELRAIARQNGLGYVLVTASALVVLGGLVLRLVEPGIQSYGEALWWAIVTVTTVGYGDIAPRTPAGRVVAVVLMLVGIGVIGMLTSSLASYFLGAHQRAGHPTIEHIREWLADWEKMSRTERRQLAALLWILADENDLPPELARSAEIVREGADASRLRAERPAERTHFLSDQAR
SIO_010081: TRD_RS11565
subclass of: SO_0000673
so part of: TRD_RS11565
location: 515909..516742
location: region:515909-516742:1
so has part: feature:515909-516742:1:exon

WP_052294133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515909-516742:1:exon

TRD_RS11570
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11570
old locus tag: trd_A0525
so part of: sequence
location: complement(516647..519826)
location: region:516647-519826:-1
so has part: feature:516647-519826:-1:exon
subclass of: SO_0000010

position:516647:-1
position: 516647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519826:-1
position: 519826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516647-519826:-1:exon

TRD_RS11570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11570
old locus tag: trd_A0525
EC number: 2.7.7.7
inference: COORDINATES: protein motif:HMM:NF004225.0
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: error-prone DNA polymerase
translation: MGAPYAELHAHSCFSLLDAPCHPEQLVQQAAALGYEHLALTDHDALHGVVRFVRAAERVGIHPIVGAEITMEDGSHLALLAEDERGYATLARLLSAARLGWPTPEGPGSEDTALAGSPARRAVALPWHWLVDHHDGLIVLTGCRQGPLARALTEGNRADALARAHWLARVFGPERCFVELQDHGERGDRERCTELAALARTAGLPLVATGNVHYLDAAGWRLQDVLVCIREGITIETPHPARKTSAAYRLVAPASMAHRFRSFPDAVANTRRIAERCQVSLDFRQVRFPPLPHLVPPGETPMQVLRRQAYEGAQRRYGQLSEPVVRQLEHELGVIERLGVAEFFLICADLANRFRGRGRGSAADSLVAYCLGITQVDPLAHRLLFERFLNEERPSMPDIDIDFGLEDRERAIAYVYATYGVEHAAMVCNYVTFQARSAIRDLGRVLGLPPEIIDELAKSQGRLGEALPVLARALAPRLSPDLRRRLAWLVRLVPQLEDIPRHLSVHVGGMVIAGRPVVEFTTVEPSRMPGRVVLGWDKRDIEEAGLIKTDVLCVRAISVVHQAIELIEQASGLRIDLEQLPLDDPAVYRLLQTADTIGTYQVESRAQQQSLPRTHPERFEDLIAQVAIIRPGPIQGGMVHPYIRRRRGLEPVRYLHPKLEPILRETLGVILYQEQVLEVAMAIAGMTAGQADAFRRAMGSKRSRAAMEALRGDFLAGAERNGVARPVAERIFEQIAAFAEYGFCKSHAAALARTAYETLWLRAHYPAALLCALLNNQPMGFYAPEVLIWDALRRGIHVLPPDVLASAARSTLTGDPVHGPVRLGLTAVRGVGRAAAERIVAARSEEPFRDTADVVRRAQLTPEQVEALVLVGAFDRLAPDRSRRELLWDLLAVATERPERPRLLDVSEPAVRLPELDTVEQTFLDYAILGFCLDRHLMELYRAQRRILRVTPAARLRTLPPGATARVAGLVVCRQAPPTARGVLFLTLEDETGLVNVIVPPPVREQHRALLRRQPVLVIDGRVEREGALASLVAEEVRPLGRPLSAQPTRVRTLSHDFR
SIO_010081: TRD_RS11570
subclass of: SO_0000673
so part of: TRD_RS11570
location: complement(516647..519826)
location: region:516647-519826:-1
so has part: feature:516647-519826:-1:exon

WP_012642612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516647-519826:-1:exon

TRD_RS11575
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11575
old locus tag: trd_A0526
so part of: sequence
location: complement(519841..521091)
location: region:519841-521091:-1
so has part: feature:519841-521091:-1:exon
subclass of: SO_0000010

position:519841:-1
position: 519841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521091:-1
position: 521091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519841-521091:-1:exon

TRD_RS11575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11575
old locus tag: trd_A0526
inference: COORDINATES: protein motif:HMM:NF023227.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVGYLAIDRWPHRPLDELLAPLTPAIQKDEEERGVWFDASGIRLQHGDEERYGRAVLATVAHAAGTGRIGIAATPWVARLAARLAAPDEVIVVPELETRAFLRPLPLEWLPLPSRVQDRLRALGIVTIGQFADLPLQSLRRRFGADIVLAHRLAHGDDPTPFRGWTPLVPLRAERALEPPIATHDALEPVLRSLCREIADGLAALAHAARSIQLELVEEADRTVARFRRLPQPLRTTPELFAVAWSLLAGMTVVHPIVLLRLTVEEHAPVHASQPALFDETPARTAERERLWQAAQRFARGRVVRILEHVPVAPLPELRWRVQGMTRLAAHPFHGEPVRLARRPSGWWLWLGERWIPIVRGGLYERLDLWWPVERHRRTVWVELADGQRLLLARDHLARDGASERPTWRLVGRLD
SIO_010081: TRD_RS11575
subclass of: SO_0000673
so part of: TRD_RS11575
location: complement(519841..521091)
location: region:519841-521091:-1
so has part: feature:519841-521091:-1:exon

WP_041437318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519841-521091:-1:exon

TRD_RS13930
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13930
old locus tag: trd_A0527
so part of: sequence
location: complement(521039..522112)
location: region:521039-522112:-1
so has part: feature:521039-522112:-1:exon
subclass of: SO_0000010

position:521039:-1
position: 521039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522112:-1
position: 522112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521039-522112:-1:exon

TRD_RS13930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13930
old locus tag: trd_A0527
inference: COORDINATES: protein motif:HMM:NF012381.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase A
translation: MPVSRSAGQGVSTRRSEASSVPEVAHAGGADDPRRERIAWLRQLIAERFGSHVLLDPACLAFSAAPVRSAMPPSSTTSPRFLSTDLLGLDLALGGGLPRGRLIELAGPTYSGKRTLAGWFVRSVQRAGGWVAYLDAAHSVDFDRLHHWGVAVLDLLVALPQSVTEALELARLLVLSGALDLVVLDLPPHLALRSALDRGLRQLRPLLRGLPTAFVVVRDRVDTPALATAQVRLRLEPLTQLVRPGPLAAQALPEGLRVHVRIERGPLWPPRDPPVPIELCLREGVRVALERIDLGLALGVIRLHSLGLVFAETVLGRTRERAAVRLQSDPSLWSQLEEEIRVRWLSGDRSLAAPTAR
SIO_010081: TRD_RS13930
subclass of: SO_0000673
so part of: TRD_RS13930
location: complement(521039..522112)
location: region:521039-522112:-1
so has part: feature:521039-522112:-1:exon

WP_012643219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521039-522112:-1:exon

TRD_RS11590
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: chrA
locus tag: TRD_RS11590
pseudo: true
so part of: sequence
location: 522555..523670
location: region:522555-523670:1
so has part: feature:522555-523670:1:exon
subclass of: SO_0000010

position:522555:1
position: 522555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523670:1
position: 523670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522555-523670:1:exon

TRD_RS11590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: chrA
locus tag: TRD_RS11590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017744652.1
GO function: GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO process: GO:0015703 - chromate transport [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: chromate efflux transporter
SIO_010081: TRD_RS11590
subclass of: SO_0000673
so part of: TRD_RS11590
location: 522555..523670
location: region:522555-523670:1
so has part: feature:522555-523670:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522555-523670:1:exon

TRD_RS11595
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11595
old locus tag: trd_A0532
so part of: sequence
location: complement(524336..525487)
location: region:524336-525487:-1
so has part: feature:524336-525487:-1:exon
subclass of: SO_0000010

position:524336:-1
position: 524336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525487:-1
position: 525487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524336-525487:-1:exon

TRD_RS11595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11595
old locus tag: trd_A0532
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873641.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MSETCAVRLAGVWKWYRGTVVPAVRDLWLDVRAGELLAILGPSGCGKTTTLRLIAGLERPDTGAIEIGGRVVAGGGRFVPPEERGVGLVFQDYALFPHLTVEENIAFGLRGFARQERARRVQELLALTGLEAFRTRYPHQLSGGQQQRVAIARALAPHPAVLLLDEPFANLDAELRLRMREELRRLLRDVGVTVILVTHDRDEALALADRVAVMLEGTVVQVDTPERVYHEPRTREVARLLGQASFVPARVLGRLGRSDIGSFALEGAEEPTEQVELLLRPRDVVLERHPEGLGVVVDRRFVGAETIYRVLLRCGITVETSQPPSVELAIGERVEVRCNRARVAAFAGDERIGLAALLERLGRTRSADTEAPVAGGTDGAAAS
SIO_010081: TRD_RS11595
subclass of: SO_0000673
so part of: TRD_RS11595
location: complement(524336..525487)
location: region:524336-525487:-1
so has part: feature:524336-525487:-1:exon

WP_012642564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524336-525487:-1:exon

TRD_RS11600
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11600
old locus tag: trd_A0533
so part of: sequence
location: complement(525484..527118)
location: region:525484-527118:-1
so has part: feature:525484-527118:-1:exon
subclass of: SO_0000010

position:525484:-1
position: 525484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527118:-1
position: 527118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525484-527118:-1:exon

TRD_RS11600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11600
old locus tag: trd_A0533
inference: COORDINATES: protein motif:HMM:NF012738.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron ABC transporter permease
translation: MTASAGRTTIAHSLRQRWSLVVIRPSEVVALVVASIALVPVLYLVWRALEGGERALASLTHPRTAWLVLRSLGLAVAVAASSALVAFPLAVLTERVAFPGRRWLAILLAVPLAVPSYVMAYAVVAALGPRGTLASLLERSIGLTRLPEVYGFFGAWLTLTLVTYPYTFLALRAALRGLDPAFEEVARTLHAGRWVTFWRVTVPLLGPALLSGMLLTTLYVLSDFGAIAILRYPTLTYSIYNQYRLSFDRSAAAALAVLLVVLSAILLIAERHWQRRAAFYRTVGTRRPPVLHRPGWGSWLGLSLALLWGSFAIGLPAGMATFWFLRARSLGEQLPGIGEPLANSLLVGSAAGLVTVALALPVAWAVVRGNGRYVSLIDLPLWIAYGLPGIVLALALVSFSVRFLPWLYQTLPLLIVGYALRFLPEATGILRATLAQQNPRLEEAARTLGLRPWRAWLTVQFPLTLPGIGSAFALVFLTTIKELPVTLLLSPIGFTTLATAVWNATADAFWSHAALPTLLLLGIGVVPMALFSWWQERGAGRSNG
SIO_010081: TRD_RS11600
subclass of: SO_0000673
so part of: TRD_RS11600
location: complement(525484..527118)
location: region:525484-527118:-1
so has part: feature:525484-527118:-1:exon

WP_052294135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525484-527118:-1:exon

TRD_RS11605
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11605
old locus tag: trd_A0534
so part of: sequence
location: complement(527115..528263)
location: region:527115-528263:-1
so has part: feature:527115-528263:-1:exon
subclass of: SO_0000010

position:527115:-1
position: 527115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528263:-1
position: 528263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527115-528263:-1:exon

TRD_RS11605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11605
old locus tag: trd_A0534
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016872758.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron ABC transporter substrate-binding protein
translation: MRRRDLIRLGGLGLAAGWTLLAACRSTEPTATPAPPTPTAAGAGMAPTASPTPAAAATRTAGATPTVMTRSQSAVVTIYSGRSKSLIGPLLDRIGQELGLDVRVRYGDTAELATAILEEGDRSPADLFFGQDAGALGALAKEGRLAPLPSELLQRVPQPYRSPKGLWVGISGRVRTVIYNTERVKPEEIPASIVDFAGNERWRARLGWAPTNGSFQAFVTALRRLRGEDVARSWLQGVKALDARVFPNNSSIVQATIKGEIEAGFVNHYYLMRERAQAGRPLPAENYFYTNGDPGGLVNVAGVGVLVTSRASDAALALVDYLLSEPAQRYFAEQTFEYPLLEGIPAHPDLPPLASLNPPALDLSDLDDLKGTLALLQEVGLL
SIO_010081: TRD_RS11605
subclass of: SO_0000673
so part of: TRD_RS11605
location: complement(527115..528263)
location: region:527115-528263:-1
so has part: feature:527115-528263:-1:exon

WP_012642785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527115-528263:-1:exon

TRD_RS11610
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11610
old locus tag: trd_A0536
so part of: sequence
location: 528843..529649
location: region:528843-529649:1
so has part: feature:528843-529649:1:exon
subclass of: SO_0000010

position:528843:1
position: 528843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529649:1
position: 529649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528843-529649:1:exon

TRD_RS11610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11610
old locus tag: trd_A0536
inference: COORDINATES: protein motif:HMM:NF013757.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator
translation: MARPARTLTTGERVLQVLQLVVERQPGLSVKEVAAELGVSLSTAYHLVHTLTAAGYVVLEPHRCLRPGPALYRLSDQLLGSRLRPTELEPVASQISEMTGCRSYLAVWSDRDVEVIYVHGRRGVRELPGLRRGFRGAAHALALGKLLLVDRRLEEWPDYLQQERLPRFTPTTIESPYQLQDELREVRASGVAFDREEYALGSACIAVPLVREDGGVAVALGISVPVRRFAAESELLVGLLRRVASAASLSRSDFPVLLADTAKNTRMH
SIO_010081: TRD_RS11610
subclass of: SO_0000673
so part of: TRD_RS11610
location: 528843..529649
location: region:528843-529649:1
so has part: feature:528843-529649:1:exon

WP_169302313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528843-529649:1:exon

TRD_RS11615
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11615
old locus tag: trd_A0537
so part of: sequence
location: 529719..530468
location: region:529719-530468:1
so has part: feature:529719-530468:1:exon
subclass of: SO_0000010

position:529719:1
position: 529719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530468:1
position: 530468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529719-530468:1:exon

TRD_RS11615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11615
old locus tag: trd_A0537
inference: COORDINATES: protein motif:HMM:NF013999.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-sulfur cluster assembly protein
translation: METKALWAQLERVLDPELDESIVRLGFVQRVEQEGQRVRVVLRLPTYWCSPNFAYLMADGVRRALLERSEIAQVEIVLEDHFASDVLSRGVSAGRSFCELFPDEATEELEELRKRFLIKGYLSRLLVLVQALRNAGAPGSVLARARLAALVSSGEDAWLCDEDNRYGPIRARIADRYLARRAELGLPMDADAPLLLRPDGSAIGEEELPDELRRLRATVVNLRASTALCEALLESRQQWWTAERKEALR
SIO_010081: TRD_RS11615
subclass of: SO_0000673
so part of: TRD_RS11615
location: 529719..530468
location: region:529719-530468:1
so has part: feature:529719-530468:1:exon

WP_012642850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529719-530468:1:exon

TRD_RS11620
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11620
old locus tag: trd_A0538
so part of: sequence
location: 530465..531499
location: region:530465-531499:1
so has part: feature:530465-531499:1:exon
subclass of: SO_0000010

position:530465:1
position: 530465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531499:1
position: 531499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530465-531499:1:exon

TRD_RS11620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11620
old locus tag: trd_A0538
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013639985.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase family protein
translation: MITIDGQEVFVIDGHMHFWDGSPENWRNQWGEGWIKCFYDYHLALSPKEAVWPFEKFTKYSEDDLVRDLFLEGHVDMGIFNSTYLREFFKNGFNTHEQNYVLVEKYPDRFILCGSFDPRWGEAGLETFRRMVEQYPIRGLKLYTAEWYDGSRGWKLSDPMAYRYLELCRELGIKNIHVHKGPTVYPLSKDAFDVHDVDYAATDFPELNFIIEHVGLPRLDDFCWIAKQEKNVYAGLAVASAFIATRPRYFAEIMANLLYWVGEDKILFGSDYAIWTPKWIVEAFARFELPEDIKEEYGVDLTPQAKRKILGENAARLYGIDIAAQKAKLAQDPIGQLLAAQQAA
SIO_010081: TRD_RS11620
subclass of: SO_0000673
so part of: TRD_RS11620
location: 530465..531499
location: region:530465-531499:1
so has part: feature:530465-531499:1:exon

WP_012643178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530465-531499:1:exon

TRD_RS11625
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11625
old locus tag: trd_A0539
so part of: sequence
location: 531580..532623
location: region:531580-532623:1
so has part: feature:531580-532623:1:exon
subclass of: SO_0000010

position:531580:1
position: 531580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532623:1
position: 532623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531580-532623:1:exon

TRD_RS11625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11625
old locus tag: trd_A0539
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007741897.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent alcohol dehydrogenase
translation: MLAARLYRYDPAMQEELRLETVPDPTIRQPDEVIVRIVGAGLCRTDLHIIEGVWRPILDPEGKLLPYTLGHENTGIVEAVGSAVRNVRVGDRVICHPQATCGLCLGCRVGEDMYCTSARFPGLDSDGGFAQYLVTTERALVKVPEDVDLVDIAPLADAGLTAYRAAKRASRIAPPDGWVVIIGIGGLGHIALQVLRALAGVRIVAVDRSPLARERAGELGADHVLAGSPDLAAEIRELTGGGAHVVLDFVGEQGVEQQSWQMLRKGGTHLIIGYGGTLEIPTVRMIFGELTVAGSLVGNYKELVELIDLVARGKVRVFTQRYTLQEINRAIDDFKHGRYFGRAVITP
SIO_010081: TRD_RS11625
subclass of: SO_0000673
so part of: TRD_RS11625
location: 531580..532623
location: region:531580-532623:1
so has part: feature:531580-532623:1:exon

WP_012642855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531580-532623:1:exon

TRD_RS11630
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11630
so part of: sequence
location: complement(532690..532764)
location: region:532690-532764:-1
so has part: feature:532690-532764:-1:exon
subclass of: SO_0000663

position:532690:-1
position: 532690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532764:-1
position: 532764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532690-532764:-1:exon

TRD_RS11630
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 309801
locus tag: TRD_RS11630
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(532730..532732),aa:Met,seq:cat)
SIO_010081: TRD_RS11630
subclass of: SO_0000673
so part of: TRD_RS11630
location: complement(532690..532764)
location: region:532690-532764:-1
so has part: feature:532690-532764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:532690-532764:-1:exon

TRD_RS11635
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: rrf
locus tag: TRD_RS11635
so part of: sequence
location: complement(532801..532919)
location: region:532801-532919:-1
so has part: feature:532801-532919:-1:exon
subclass of: SO_0000573

position:532801:-1
position: 532801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532919:-1
position: 532919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532801-532919:-1:exon

TRD_RS11635
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 309801
gene: rrf
locus tag: TRD_RS11635
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TRD_RS11635
subclass of: SO_0000673
so part of: TRD_RS11635
location: complement(532801..532919)
location: region:532801-532919:-1
so has part: feature:532801-532919:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:532801-532919:-1:exon

TRD_RS11640
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11640
so part of: sequence
location: complement(533001..535988)
location: region:533001-535988:-1
so has part: feature:533001-535988:-1:exon
subclass of: SO_0000573

position:533001:-1
position: 533001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535988:-1
position: 535988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533001-535988:-1:exon

TRD_RS11640
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 309801
locus tag: TRD_RS11640
product: 23S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF02541
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TRD_RS11640
subclass of: SO_0000673
so part of: TRD_RS11640
location: complement(533001..535988)
location: region:533001-535988:-1
so has part: feature:533001-535988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533001-535988:-1:exon

TRD_RS11645
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11645
so part of: sequence
location: complement(536298..537819)
location: region:536298-537819:-1
so has part: feature:536298-537819:-1:exon
subclass of: SO_0000573

position:536298:-1
position: 536298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537819:-1
position: 537819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536298-537819:-1:exon

TRD_RS11645
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 309801
locus tag: TRD_RS11645
product: 16S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00177
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: TRD_RS11645
subclass of: SO_0000673
so part of: TRD_RS11645
location: complement(536298..537819)
location: region:536298-537819:-1
so has part: feature:536298-537819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536298-537819:-1:exon

TRD_RS11650
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11650
old locus tag: trd_A0542
so part of: sequence
location: complement(538092..538706)
location: region:538092-538706:-1
so has part: feature:538092-538706:-1:exon
subclass of: SO_0000010

position:538092:-1
position: 538092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538706:-1
position: 538706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538092-538706:-1:exon

TRD_RS11650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11650
old locus tag: trd_A0542
EC number: 3.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011563138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isochorismatase family cysteine hydrolase
translation: MPRTVEVPEYTIAPEVEIDPRTTALIVVDMQNDFVRPEGKLFVPDAPATVPKIQALLAFARQHGIFTVFTQDTHYPGDPEFPIWGEHCVAGTWGWQIIDELAPREGELVLQKRRYDAFYGTPLDHELRLRKIEQLIICGTVASICVHYTAASAALRWYGVIIPVDATSALHPFDLEAANRQTAFLFRGVLTRADGVRLRSGVPA
SIO_010081: TRD_RS11650
subclass of: SO_0000673
so part of: TRD_RS11650
location: complement(538092..538706)
location: region:538092-538706:-1
so has part: feature:538092-538706:-1:exon

WP_012642574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538092-538706:-1:exon

TRD_RS11655
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11655
old locus tag: trd_A0543
so part of: sequence
location: 538904..539809
location: region:538904-539809:1
so has part: feature:538904-539809:1:exon
subclass of: SO_0000010

position:538904:1
position: 538904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539809:1
position: 539809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538904-539809:1:exon

TRD_RS11655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11655
old locus tag: trd_A0543
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008479806.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxymethylglutaryl-CoA lyase
translation: MPSVPERVRLVEVGPRDGLQNEAFSVPTDIKIAFIDALSQAGFPAIECTSFVSPRAVPQLADAEEVMRRIARRPGTRYLALVPNERGLERALAAGCDALALFAAATDAFSQANIGVSIDESLQRYATVAVRAKAAGCWLRGYVSVAVHCPYTGPVEPQRAVEVARRLAELGCDELAVADTIGKAVPDEVARLLEALLRWLPAERVAVHLHDTTGRALDNVAVALAYGVRTIDAAVAGLGGCPFAPGAPGNLATERLLDFLEARGYDHGIDRRALERARTLLWEAIPGLARTDSPTAQLGSQ
SIO_010081: TRD_RS11655
subclass of: SO_0000673
so part of: TRD_RS11655
location: 538904..539809
location: region:538904-539809:1
so has part: feature:538904-539809:1:exon

WP_012642915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:538904-539809:1:exon

TRD_RS11660
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11660
old locus tag: trd_A0544
so part of: sequence
location: 539851..540255
location: region:539851-540255:1
so has part: feature:539851-540255:1:exon
subclass of: SO_0000010

position:539851:1
position: 539851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540255:1
position: 540255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539851-540255:1:exon

TRD_RS11660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11660
old locus tag: trd_A0544
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011563516.1
GO function: GO:0070967 - coenzyme F420 binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR03667 family PPOX class F420-dependent oxidoreductase
translation: MLTYPPAVLQQLRNESIIWLATVRPDGQPQVVPVWFLWDDGAVLIYSRPRSQKVRNIRHNPRVSLHFNSDPWAEHVTRFDGRAELVSDAALANERPAYLAKYRDGISRIGMTPETFAREYSLLIRVYPEHLVHW
SIO_010081: TRD_RS11660
subclass of: SO_0000673
so part of: TRD_RS11660
location: 539851..540255
location: region:539851-540255:1
so has part: feature:539851-540255:1:exon

WP_012642380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539851-540255:1:exon

TRD_RS11665
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11665
old locus tag: trd_A0545
so part of: sequence
location: complement(540317..541240)
location: region:540317-541240:-1
so has part: feature:540317-541240:-1:exon
subclass of: SO_0000010

position:540317:-1
position: 540317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541240:-1
position: 541240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540317-541240:-1:exon

TRD_RS11665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11665
old locus tag: trd_A0545
inference: COORDINATES: protein motif:HMM:NF012791.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MIETILVAHDGSPAAETTLPAAVLLARLFSVPVVLVRVLETMRPFYDPRHGEVIWLSEDEPRLEIPPEELFAAQLSILRERGITAVAVVRLGKPADELVKEARAWPAPVLVLGSHGRGGVGRAVIGSVTDRVVRTASCPVLVVRAGGPALERIEHVLVPLDGSPRAERALPYAIALAERAGARLTLARVAETHRELLLEWRGRPIAPATQERLAAIEEEAAHYLDAIRERIPAGIRVQLLQLSGDPKRQLVAAVARERTDLVVLTTRGKGGLERWLLGSVTERLLTATRVPLFIVPSTEESEVHQAE
SIO_010081: TRD_RS11665
subclass of: SO_0000673
so part of: TRD_RS11665
location: complement(540317..541240)
location: region:540317-541240:-1
so has part: feature:540317-541240:-1:exon

WP_012642718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:540317-541240:-1:exon

TRD_RS11670
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11670
old locus tag: trd_A0546
so part of: sequence
location: 541368..542492
location: region:541368-542492:1
so has part: feature:541368-542492:1:exon
subclass of: SO_0000010

position:541368:1
position: 541368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542492:1
position: 542492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541368-542492:1:exon

TRD_RS11670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11670
old locus tag: trd_A0546
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012872942.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetamidase/formamidase family protein
translation: MIRTHRLSVDPLRPLAEQPGKGHNRWHEAIPPALEVEPGEPVALETWDAFDAQLTPQSTIHDVAGADLSRVHPLTGPVFVKGAQPGDLLEVKLQAIEPDPWQHWGYTVQVPGFGFLRDQFPQPYIVHWHLYDTYAESPQLPGVRIPRCPHPGTIGVALSRELREAVARREAELAARGGFALLPDPTGAVPASEPIASEGLRTIPPRENAGNLDIKQLTPGASIFIPVWVEGALFSVGDVHFAQGDGEVCGTAIEMRSVVHVEFRVHKGEARRRGIRTVQFLRDGYFTAPEMAAPRRFYATTGICVRNGRNESEDLTLAARDALFRMIEYLQRRGFTAQQAYALCSVAVDLRVSETVDVPNVMVSAILPLDIFVG
SIO_010081: TRD_RS11670
subclass of: SO_0000673
so part of: TRD_RS11670
location: 541368..542492
location: region:541368-542492:1
so has part: feature:541368-542492:1:exon

WP_012642582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541368-542492:1:exon

TRD_RS11675
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11675
old locus tag: trd_A0547
so part of: sequence
location: complement(542586..543017)
location: region:542586-543017:-1
so has part: feature:542586-543017:-1:exon
subclass of: SO_0000010

position:542586:-1
position: 542586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543017:-1
position: 543017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542586-543017:-1:exon

TRD_RS11675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11675
old locus tag: trd_A0547
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007920702.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OsmC family protein
translation: MPVRTATATWEGTLESGSGTTAAGSGAFSVRFTAGTRFGEEPGTNPEELIGAAYAGCYSMALAAVLGRAGFQPERITTTARVRIQQVDGGFAIDRIELETEGKVPGIDEEQFKEFAEQAKRTCPVGRALGGVEEIVVRAQLVQ
SIO_010081: TRD_RS11675
subclass of: SO_0000673
so part of: TRD_RS11675
location: complement(542586..543017)
location: region:542586-543017:-1
so has part: feature:542586-543017:-1:exon

WP_012642572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542586-543017:-1:exon

TRD_RS11680
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: cofE
locus tag: TRD_RS11680
old locus tag: trd_A0548
so part of: sequence
location: complement(543092..543844)
location: region:543092-543844:-1
so has part: feature:543092-543844:-1:exon
subclass of: SO_0000010

position:543092:-1
position: 543092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543844:-1
position: 543844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543092-543844:-1:exon

TRD_RS11680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: cofE
locus tag: TRD_RS11680
old locus tag: trd_A0548
EC number: 6.3.2.31
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008475057.1
GO function: GO:0043773 - coenzyme F420-0 gamma-glutamyl ligase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: coenzyme F420-0:L-glutamate ligase
translation: MTDEVRLIPIRRIPEARPGDSVAELVLTGMAACGLTGEEGDVLVVTQKLVSKAEGRVVALAGIEPSPFAIAYGQRWERDPRQIELVLRESARIVRMDRGLIIAETRHGFVCANAGVDLSNVPAGYAALLPLDPDRSAAQIREELGERVGWTPAVIVSDTFGRAWRNGIVNVAIGVAGMRPLRDYRGQRDPFGNELRVTVIAIADELAAAAELVMGKTEGCPAVIVRGFRYEPGEGSARELLMPAERDLFR
SIO_010081: TRD_RS11680
subclass of: SO_0000673
so part of: TRD_RS11680
location: complement(543092..543844)
location: region:543092-543844:-1
so has part: feature:543092-543844:-1:exon

WP_012642974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543092-543844:-1:exon

TRD_RS11685
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11685
old locus tag: trd_A0549
so part of: sequence
location: complement(543848..544261)
location: region:543848-544261:-1
so has part: feature:543848-544261:-1:exon
subclass of: SO_0000010

position:543848:-1
position: 543848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544261:-1
position: 544261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543848-544261:-1:exon

TRD_RS11685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11685
old locus tag: trd_A0549
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007922967.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PPOX class F420-dependent oxidoreductase
translation: MAVIPEYLRDFLLAPRFAVLATIAPDGLPRQSVMWYDVLDQETILMNTAVGRAKLDDLRRDPRASLCIADGYRYVTVIGRVELIEDQERAQADIARLAVRYVGEEEARSWIPQFRAQRRVTLLLRIERVLAHGFAGA
SIO_010081: TRD_RS11685
subclass of: SO_0000673
so part of: TRD_RS11685
location: complement(543848..544261)
location: region:543848-544261:-1
so has part: feature:543848-544261:-1:exon

WP_012642831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543848-544261:-1:exon

TRD_RS11690
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11690
old locus tag: trd_A0550
so part of: sequence
location: 544410..545288
location: region:544410-545288:1
so has part: feature:544410-545288:1:exon
subclass of: SO_0000010

position:544410:1
position: 544410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545288:1
position: 545288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544410-545288:1:exon

TRD_RS11690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11690
old locus tag: trd_A0550
inference: COORDINATES: protein motif:HMM:NF024109.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MEARLTPKTVALDGLLLFVLEAGENRLPLLILHGFASSALAWTEVIRALAPQRRVLAYDRPGFGLTAVTSDTWHGLDPYAPAAQVPIARALVQHLGVGRFAVLGHSMGGRLAYELARALPDQVVAAILVTPAWERPSAPRLARFARQPLVGALVRSVLRTSSPLALQFAQRRVWASPPPKGREELASVAVSLAGWDERLWRVTLATLAESSARRPEQAPTVPTLVVLGEHDRIVSNERTLQLVADWQAAGATVRVERCARSGHLPHVEEFARFVQLVEEFLQEVEHAETPAR
SIO_010081: TRD_RS11690
subclass of: SO_0000673
so part of: TRD_RS11690
location: 544410..545288
location: region:544410-545288:1
so has part: feature:544410-545288:1:exon

WP_012643161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544410-545288:1:exon

TRD_RS15230
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS15230
old locus tag: trd_A0551
so part of: sequence
location: 545266..545394
location: region:545266-545394:1
so has part: feature:545266-545394:1:exon
subclass of: SO_0000010

position:545266:1
position: 545266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545394:1
position: 545394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545266-545394:1:exon

TRD_RS15230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS15230
old locus tag: trd_A0551
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRLQPGDRLPEWQAVTLSGEPVGSGTLRGRPAVIVLLRGLR
SIO_010081: TRD_RS15230
subclass of: SO_0000673
so part of: TRD_RS15230
location: 545266..545394
location: region:545266-545394:1
so has part: feature:545266-545394:1:exon

WP_012643006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:545266-545394:1:exon

TRD_RS11695
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11695
old locus tag: trd_A0552
pseudo: true
so part of: sequence
location: <545410..545736
location: region:545410-545736:1
so has part: feature:545410-545736:1:exon
subclass of: SO_0000010

position:545410:1
position: 545410
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:545736:1
position: 545736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545410-545736:1:exon

TRD_RS11695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11695
old locus tag: trd_A0552
inference: COORDINATES: protein motif:HMM:NF020123.2
GO function: GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: redoxin domain-containing protein
SIO_010081: TRD_RS11695
subclass of: SO_0000673
so part of: TRD_RS11695
location: <545410..545736
location: region:545410-545736:1
so has part: feature:545410-545736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:545410-545736:1:exon

TRD_RS11705
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11705
old locus tag: trd_A0554
so part of: sequence
location: complement(546023..546850)
location: region:546023-546850:-1
so has part: feature:546023-546850:-1:exon
subclass of: SO_0000010

position:546023:-1
position: 546023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546850:-1
position: 546850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546023-546850:-1:exon

TRD_RS11705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11705
old locus tag: trd_A0554
inference: COORDINATES: protein motif:HMM:NF013429.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar phosphate isomerase/epimerase family protein
translation: MRWKLAAFADEIHPDPAPALDTMHAAGINTVELRSAWGKNVLDLTDEELAALAQEVARRTMTVAVIASPVGKSLITDPAAFQSARLDRALAIARRFGSWGVRVFSFYLPPGEPPERYRDEVLRRIEQWVHRAAESGITLLHENEKEIYGDIPHRCFDLLNSIGSPWFRAVWDPANFVRCGVRPFSTGFAMLAPFIAHVHVKDAVLGSGEVTVAGAGDGEIAETLAALATRGYRGYLSLEPHLLIAGSHGGFTGRTAFLTALRALRQLLEGIPAPS
SIO_010081: TRD_RS11705
subclass of: SO_0000673
so part of: TRD_RS11705
location: complement(546023..546850)
location: region:546023-546850:-1
so has part: feature:546023-546850:-1:exon

WP_012642711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546023-546850:-1:exon

TRD_RS11710
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11710
so part of: sequence
location: complement(547488..547563)
location: region:547488-547563:-1
so has part: feature:547488-547563:-1:exon
subclass of: SO_0000663

position:547488:-1
position: 547488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547563:-1
position: 547563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547488-547563:-1:exon

TRD_RS11710
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 309801
locus tag: TRD_RS11710
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(547528..547530),aa:Lys,seq:ttt)
SIO_010081: TRD_RS11710
subclass of: SO_0000673
so part of: TRD_RS11710
location: complement(547488..547563)
location: region:547488-547563:-1
so has part: feature:547488-547563:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547488-547563:-1:exon

TRD_RS11715
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11715
old locus tag: trd_A0557
so part of: sequence
location: 547715..547969
location: region:547715-547969:1
so has part: feature:547715-547969:1:exon
subclass of: SO_0000010

position:547715:1
position: 547715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547969:1
position: 547969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547715-547969:1:exon

TRD_RS11715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11715
old locus tag: trd_A0557
EC number: 2.1.1.77
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008481006.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLSEADARNLALRALDRLGGPQAVYRSPRHPFSPTGMRVFTLDDVEIRIRYGEISSPAVIELAGYVFEIREDELILLFRPPSP
SIO_010081: TRD_RS11715
subclass of: SO_0000673
so part of: TRD_RS11715
location: 547715..547969
location: region:547715-547969:1
so has part: feature:547715-547969:1:exon

WP_012642417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547715-547969:1:exon

TRD_RS13940
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13940
old locus tag: trd_A0560
pseudo: true
so part of: sequence
location: 547966..548799
location: region:547966-548799:1
so has part: feature:547966-548799:1:exon
subclass of: SO_0000010

position:547966:1
position: 547966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548799:1
position: 548799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547966-548799:1:exon

TRD_RS13940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13940
old locus tag: trd_A0560
inference: COORDINATES: protein motif:HMM:NF014049.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF92 domain-containing protein
SIO_010081: TRD_RS13940
subclass of: SO_0000673
so part of: TRD_RS13940
location: 547966..548799
location: region:547966-548799:1
so has part: feature:547966-548799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547966-548799:1:exon

TRD_RS11725
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11725
old locus tag: trd_A0559
so part of: sequence
location: complement(548760..549425)
location: region:548760-549425:-1
so has part: feature:548760-549425:-1:exon
subclass of: SO_0000010

position:548760:-1
position: 548760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549425:-1
position: 549425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548760-549425:-1:exon

TRD_RS11725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11725
old locus tag: trd_A0559
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008481013.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chlorite dismutase family protein
translation: MNALPRYTVFWLCALDQDRVPRPVEPAVEEFVQLLERSEGTALRGAYLATGFRPDVDLIFWLLGHDPAHFQDLALALRRTALGRALPVRYAYFGMAGSSQYDPTHGPAFLRGEPPKRYLSVYPFVKTPEWYLLPFEERRRLMAEHGRLGDEFPTVLTNTVNSFGVQDQEFIVALEDDDVGTLITMVQRLRAAEVRKYTQLDTPIFLGQRYEPREALIRLVQ
SIO_010081: TRD_RS11725
subclass of: SO_0000673
so part of: TRD_RS11725
location: complement(548760..549425)
location: region:548760-549425:-1
so has part: feature:548760-549425:-1:exon

WP_041437325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548760-549425:-1:exon

TRD_RS11730
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11730
old locus tag: trd_A0561
so part of: sequence
location: complement(549775..552438)
location: region:549775-552438:-1
so has part: feature:549775-552438:-1:exon
subclass of: SO_0000010

position:549775:-1
position: 549775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552438:-1
position: 552438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549775-552438:-1:exon

TRD_RS11730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11730
old locus tag: trd_A0561
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873221.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pitrilysin family protein
translation: MHDDGAFIATRLTNGLEVLLQPLRHAPVVSCWIWYRVGSRNEQPGLTGISHWVEHMLFKGTPRFPPGTIFRQVNRWGGTLNGFTWLDYTAYFETLPTPGWQLALDIEADRMVAAAFDPGEVERERTVILAERAGSENQPSTYLREEVLAASFRAHPYGHPVIGYREDLQTITRDDLYQHYRTYYQPNNAILVIVGDIDPDTALVAVERRFAGLPAGTVPPPVRAREPDQWGERRVTVRRPAPTAQLLMAWRVPAATHPDIPALLVLDAILSGGKPVAFGGGGMGRSARLYRALVAPGLCTAAASSMSLTLDPFVFTVSATLTPLAEPARVETIIEETIARLREDAVGQDELARAKRQLTVQFAAANESAQSRAALLGSLAVVAPDRSPERLLAELQAVEPDDVVRVANTYLRPERRTVGWLEPVASDEERVGVTGEPLETPAPRYWFTGGASSPSEPVLLPRVHLVPVTGRLANGAQFAGQAIPASGLAVVNIRIPAGAARDGTLPGIASVTGQLLMRGTLARDEAALNEELDRLGATVSVNVGRDSVDIGLTCLVEVLEQALPLLVEVIVSPAFLPEQLHRVRQQALTALRQAQQSTRAQADALLRALLYPAGHPYHHRILGTEESLESLTVKAVRAFHETYYRPAGAVITVAGGLEPEIVSEWLGRALASWQGTAPPLEIPDVVPADRGARRTETLPGKQQADLALGILTIPRRHPDYEALRLANVVLGRLGLMGRIGARVRERSGLAYYAASALETGLGTGFWTAYAGVAPVHVERVIGQIVEEVEQFRREGPTPQELADAKTALAGTVVLGLSTAAGLAGALADSLFYELGLDYLERLPERLAAIDEAMVRAVAVRYLDPTRLQVTIVGPAADGPLSPPTPQP
SIO_010081: TRD_RS11730
subclass of: SO_0000673
so part of: TRD_RS11730
location: complement(549775..552438)
location: region:549775-552438:-1
so has part: feature:549775-552438:-1:exon

WP_012642968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549775-552438:-1:exon

TRD_RS11735
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: acnA
locus tag: TRD_RS11735
old locus tag: trd_A0562
so part of: sequence
location: complement(552494..555277)
location: region:552494-555277:-1
so has part: feature:552494-555277:-1:exon
subclass of: SO_0000010

position:552494:-1
position: 552494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555277:-1
position: 555277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552494-555277:-1:exon

TRD_RS11735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: acnA
locus tag: TRD_RS11735
old locus tag: trd_A0562
EC number: 4.2.1.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873224.1
GO function: GO:0003994 - aconitate hydratase activity [Evidence IEA]
GO process: GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aconitate hydratase AcnA
translation: MVTQGIDPFGARATLDTPEGRVRYFRLATVADQLAIDLDQLPYTVKVLLENVLRYAGAEPFTEDDVRLVAAWRPGTKPAKEFPFLPTRVLLQDFTGVPAVVDLAAMRTAVARLGGDPSRINPLVPVDLVIDHSVQVDVFGTTVAFQRNVEKEYERNRERYALLRWAQQAFRNFRVVPPGTGIVHQVNLEYLASVVAVRQSDREAVAFPDTLVGTDSHTTMINALGVLGWGVGGIEAEAVLLGQPIYLLLPEVVGLRLINEPPGGVTATDLVLTITQLLRQVGVVGKFVEVFGPGLRHLSLPDRATISNMAPEMGATAVMFPIDDETLGYLRLTGRSEGHVRLVEAYAKEQGLFRTPESPDPLFDQVVELDLSTLEPSLAGPRRPQDRVRLSELPASLRAAFPEQFPSPQAEQERFDWEGGSVNEAQEPSEPVVPVGQRRKVVDVHLDGRHVELTHGSVVIAAITSCTNTSNPEVMLGAGILAKKAVERGLDTHPAVKTSLAPGSGVVTAYLERAGLMPYLEALRFHLVGYGCTTCIGNSGPLPEPIAKAVQEHELVVAAVLSGNRNFEGRIHPQVRAAYLASPPLVVAFAIAGRVDIDLTSEPIGYDPNGEPVYLREIWPTPEEIREAMEKAIGPELFIERYREVFTGDEHWRSLPVPTGDLYQWDPDSTYIQEPPFFKDLALEPPPLRDIERARVLAWLGDSVTTDHISPAGSIPVNSPAGQYLIARGVQPKDFNSYGARRGNHEVMVRGTFANIRLRNRLAQGREGGWTTHFPSGELVTIYEAALRYQMAGVPLIVIAGKEYGSGSSRDWAAKGPMLLGVRAVLAESFERIHRSNLVGMGVLPLQFLPGQNAEALGLDGSERYTIAGISDGLVPRELVTVRAEREDGRVIEFQAIARLDTDMEIEYYRHGGILTFVLRRLLRGEA
SIO_010081: TRD_RS11735
subclass of: SO_0000673
so part of: TRD_RS11735
location: complement(552494..555277)
location: region:552494-555277:-1
so has part: feature:552494-555277:-1:exon

WP_012642545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552494-555277:-1:exon

TRD_RS11740
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11740
old locus tag: trd_A0563
so part of: sequence
location: complement(555700..556710)
location: region:555700-556710:-1
so has part: feature:555700-556710:-1:exon
subclass of: SO_0000010

position:555700:-1
position: 555700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556710:-1
position: 556710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555700-556710:-1:exon

TRD_RS11740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11740
old locus tag: trd_A0563
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873227.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XdhC family protein
translation: MTKASHAEATLSRDLFALAADLRQRGVPFVLATVIWTQSPTSAKPGAKGIVTADGALFGWVGGSCAQPAVMREAMAALHDGRARILRIDPVGSPDQPPRPGVIVAPMTCHSEGALEIFLEPFLPAPQLLIYGESPVADALLRLGKAMGYWVVALRPGASGAPAEVDEWLDSLDPGDRPRRRPTVAVVASLGAYDEDAIEAALRAGVTFVELVASRKRFRAIRETLARSLPETLLERVKAPAGLDIQATSPEEIAVSILAELIAAKSVWRNTWRPEEAGARTELPTREAIDPVCGMTVNTESARHVVDYRGQRYFFCCPACRRLFEADPEAYLSTTR
SIO_010081: TRD_RS11740
subclass of: SO_0000673
so part of: TRD_RS11740
location: complement(555700..556710)
location: region:555700-556710:-1
so has part: feature:555700-556710:-1:exon

WP_143714800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555700-556710:-1:exon

TRD_RS11745
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11745
old locus tag: trd_A0564
so part of: sequence
location: complement(556793..559138)
location: region:556793-559138:-1
so has part: feature:556793-559138:-1:exon
subclass of: SO_0000010

position:556793:-1
position: 556793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559138:-1
position: 559138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556793-559138:-1:exon

TRD_RS11745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11745
old locus tag: trd_A0564
EC number: 1.2.5.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873228.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aerobic carbon-monoxide dehydrogenase large subunit
translation: MTATAVRGIGVPVKRKEDPRFIRGKGTYVDDVKLPGMLYMDIVRSPYAHARIKRIDVSKARAMPGVIDVITGEELAKANLAWMPTLMGDRQMVLPTDRVVYYAQEVAAVIATDRYIAADAVLAVEVEYEPLPPVLDPFEALKPDAPLVRPDRDQKTNHIWHWEAGDKEKTDRIFQEAEVVVAQDLYIPRIHVASIETCGCVANYDPATDKLTIWMTSQAPHAHRTVFSLVTGIPEHKIRVISPDIGGGFGGKVPVYPGYVIATYATLKHKKPIKWIEDRSENLQADSFARDYHIHAELAANRDGKIRALRVKVLADHGAFDAAANPSRFPAGLFSVCTGSYDMEAAHVEVDGVYTTKPPGGVAYRCSFRVTEAVHTIERMVDILADELGMDPAEIRFKNFIQPHQFPYKSPTGWEYDSGNYPAALQKALDMIGYRELRREQAERRARGELMGIGISTFTEIVGAGPSHTFDILGIKMFDSAEIRVHPTGAVIVRIGVQTQGQGHETTFAQIVAEELGIPVEYITVEHGDTDTAPYGLGTYASRSTPTAGAATAVAARKIREKARLIAAHLLEVSPDDLEWKDYAFRVKGAPDRYKTMQEIAFAAYTNFPLGLEPGLEAECYYDPPNLTFPFGAYVCVVDIDRGTGQVKIREFLAVDDCGTIINPMIVEGQIHGGLTMGMAPALFEEIVYDENGTMLSGTFMDYLLPTAVETPHWKTAKTVTPSPHHPLGAKGVGESPTIGAPPAIVNAVVDALSHLGVRHIDIPITPAKLYRILQEKGVAE
SIO_010081: TRD_RS11745
subclass of: SO_0000673
so part of: TRD_RS11745
location: complement(556793..559138)
location: region:556793-559138:-1
so has part: feature:556793-559138:-1:exon

WP_012642423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556793-559138:-1:exon

TRD_RS11750
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11750
old locus tag: trd_A0565
so part of: sequence
location: complement(559142..559642)
location: region:559142-559642:-1
so has part: feature:559142-559642:-1:exon
subclass of: SO_0000010

position:559142:-1
position: 559142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559642:-1
position: 559642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559142-559642:-1:exon

TRD_RS11750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11750
old locus tag: trd_A0565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013494970.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (2Fe-2S)-binding protein
translation: MERVPITVTVNGRTYTAEVEPRLLLVHFIRDVLNLTGTHIGCDTTSCGACTVIWNGRPVKSCTVFAVQADGTEILTVEGLERDGQLHPVQEGFWEEHGLQCGYCTPGMMMTAVALLAENPDPTEEEIRAAISGNLCRCTGYVNIVKAIQYAARKMRESATAGVGGA
SIO_010081: TRD_RS11750
subclass of: SO_0000673
so part of: TRD_RS11750
location: complement(559142..559642)
location: region:559142-559642:-1
so has part: feature:559142-559642:-1:exon

WP_012642493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559142-559642:-1:exon

TRD_RS11755
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11755
old locus tag: trd_A0566
so part of: sequence
location: complement(559655..560530)
location: region:559655-560530:-1
so has part: feature:559655-560530:-1:exon
subclass of: SO_0000010

position:559655:-1
position: 559655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560530:-1
position: 560530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559655-560530:-1:exon

TRD_RS11755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11755
old locus tag: trd_A0566
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018051820.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: xanthine dehydrogenase family protein subunit M
translation: MIPGPFRYRRVSSVEEAVSLLAQLGSDAKVLSGGQSLIPMMKFRLAEPNYVIDINRVPGLDFLEERDGLLRIGALVRESTLERSPLIRERYPILHDTALVIADPLVRNLATVGGNLAHGDPANDHPATMLALRAQVVANGPKGERVIPIDEFFVDTFVTALEPDELLTEIRIPVSPPRSGGAYLKFERKVGDYAIAAAAAFLALDESGLIVQAGIGLTNLAYKPLRATAAEQVLIGQPPSDELFREAAERAAQATDPVSDLRGPADYKRAVARTMVFRALRRALERAQANG
SIO_010081: TRD_RS11755
subclass of: SO_0000673
so part of: TRD_RS11755
location: complement(559655..560530)
location: region:559655-560530:-1
so has part: feature:559655-560530:-1:exon

WP_012643055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559655-560530:-1:exon

TRD_RS11760
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11760
old locus tag: trd_A0567
so part of: sequence
location: complement(560816..562792)
location: region:560816-562792:-1
so has part: feature:560816-562792:-1:exon
subclass of: SO_0000010

position:560816:-1
position: 560816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562792:-1
position: 562792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560816-562792:-1:exon

TRD_RS11760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11760
old locus tag: trd_A0567
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873231.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S9 family peptidase
translation: MSENATTILTVDELVTMQRPFDVEVAPDGETIVYVVRPVSREEEHWRSSLWIVPFMEGEARQFTSGLWHDREPRWSPDGGWIAFLSDRAERGKTSVYLIPRNGGEALRVFDQAGEIDNLSWSPDGRFLAFLMVEPETEEEKQRRERRDDARVWDADWKYRRLWLLDVRTRAARVVSPERVQVWAYAWAPDSARLALAVSGTPRVDDVFRVTSVALLDIESGEYRELFTMRGVAEDLVWSADGEWLAYRGPLGRVVHGEAVFRRRVRGGEAECLTAGYRGTVEHLGPYRQGEALVVVGYEGLDARVYRLEWDGEQRLLCPRTTGSWHGRVSGSGDGTRWAGVWSDAEHVPDVWCWRVSNDISLGDTTLQRRTHLHPEIEAKLCPARSIEWTSDPGVTVQGLLVLPRDGTAKPPYPLVVQIHGGPTSQWANEFVASWHDWAQPLASRGCAVLLPNPRGSTGRGTQWINALFGDVGGGEYRDVVSGVEALVAAGLADPFRLGVSGWSWGGYLTAWTITQTDRFRAAFMGAGLCNLISDNNLGDIPSANLSYFERSPSEDPEPYWDRSPIRYVQRVRTPVLIAHGEDDERVSVCESIQFYRALQILEKPCQLVTYPREKHGFEERNHQRDLLTRILQWFAQHLDLEAPERVTMATTAPSASG
SIO_010081: TRD_RS11760
subclass of: SO_0000673
so part of: TRD_RS11760
location: complement(560816..562792)
location: region:560816-562792:-1
so has part: feature:560816-562792:-1:exon

WP_226980741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:560816-562792:-1:exon

TRD_RS11765
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11765
old locus tag: trd_A0568
so part of: sequence
location: complement(562844..563458)
location: region:562844-563458:-1
so has part: feature:562844-563458:-1:exon
subclass of: SO_0000010

position:562844:-1
position: 562844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563458:-1
position: 563458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562844-563458:-1:exon

TRD_RS11765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11765
old locus tag: trd_A0568
inference: COORDINATES: protein motif:HMM:NF024214.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase family protein
translation: MTRDKRVGAIILAGGRSERLGRAKQLLPWNGRTLVEAVVEEVCRAERLAEVLLVLRRDVAEALGKRAGERLGCARIVFPDETGEGCAASYRSGLAALEESELDAVVILLADQPGVRVETIERVIAGWESSGAAIAVVRYRDREGHPLVFDRSLFAELRQLRGEKAAWKLVDRYREGVCVVEIEESMPGDIDTWEDYEASRRRGV
SIO_010081: TRD_RS11765
subclass of: SO_0000673
so part of: TRD_RS11765
location: complement(562844..563458)
location: region:562844-563458:-1
so has part: feature:562844-563458:-1:exon

WP_012642544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:562844-563458:-1:exon

TRD_RS11770
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11770
old locus tag: trd_A0569
so part of: sequence
location: complement(563455..564096)
location: region:563455-564096:-1
so has part: feature:563455-564096:-1:exon
subclass of: SO_0000010

position:563455:-1
position: 563455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564096:-1
position: 564096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563455-564096:-1:exon

TRD_RS11770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11770
old locus tag: trd_A0569
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007909433.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MSWQPLRVAIIDDHEIVRNGLKHILADDPDFLVVGEAADGPSGVAMVDAVRPDVVIVDVRLPSMQGDDVCRLIRERVPETRILILSAFGEDELVYRCVLAGAQGYVLKDIVHFDLKKTLKMIARGEAVLDPRVASVVVERLRNRKAITDIPLSPHQLSVLRLIAQGLSNREIADRLFLSENTVKGYVQEVLRRLGARNRLEAVMIANERGWLR
SIO_010081: TRD_RS11770
subclass of: SO_0000673
so part of: TRD_RS11770
location: complement(563455..564096)
location: region:563455-564096:-1
so has part: feature:563455-564096:-1:exon

WP_012642656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:563455-564096:-1:exon

TRD_RS11775
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11775
old locus tag: trd_A0570
so part of: sequence
location: complement(564093..565340)
location: region:564093-565340:-1
so has part: feature:564093-565340:-1:exon
subclass of: SO_0000010

position:564093:-1
position: 564093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565340:-1
position: 565340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564093-565340:-1:exon

TRD_RS11775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11775
old locus tag: trd_A0570
inference: COORDINATES: protein motif:HMM:NF024883.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GAF domain-containing sensor histidine kinase
translation: MITRLPELGPTAERDDWQAQLESLYAISVEIASLRELSAVMDRALEYCLALTTSAFGFVGLVDGPETMDVAAIRGFVPDGSDFYERFRKIPIRRTIFGVVILEGRPNISNDVRNDPLHRGAPRGHPPVETFLGVPLRVRQQTIGMIGVANRPSGYDARHERLLSTFANQVAVAIENARLYERQRQMIADLQQLHARLDAARVEALLHQERNRIAADLHDRVAQIMFGIGIEATWCRDQPDVPEPVLRALDRIRELAARGAAEVRRVVYDLAEMPVGGGELVERIRQLVEGYRSEDLRVELVIEGKPRRLPPEREDAIFLIACEALTNVRRHSGADLAIVSLHFTERSVILVVQDNGCGMPHTSFVSVRTAGHFGLRSMRRRAEAVGGELSWYNGEDGGFVVRAVIPAEPRWAEQV
SIO_010081: TRD_RS11775
subclass of: SO_0000673
so part of: TRD_RS11775
location: complement(564093..565340)
location: region:564093-565340:-1
so has part: feature:564093-565340:-1:exon

WP_012642779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564093-565340:-1:exon

TRD_RS11780
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11780
old locus tag: trd_A0572
so part of: sequence
location: 565461..566606
location: region:565461-566606:1
so has part: feature:565461-566606:1:exon
subclass of: SO_0000010

position:565461:1
position: 565461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566606:1
position: 566606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565461-566606:1:exon

TRD_RS11780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11780
old locus tag: trd_A0572
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAVDWLRERLSDRTLFDHSCQPPERLSTRIPPDYLRRCFMPESLPDTLRQTPYTVAYRLALRWLAQYLGCDPTEEAILHARAERSFEEYVQLLAEDARLGPACALSSADERVYSPTEWAALVQRPVAELVAVEPLAEKLLPHCTSWDELRTLLAQALAEAVGRGAVALVSDFPRRTSLAIQPIDVATADRSFYEVRAEMDAGLFEQLQHRRLLYALFWVALEVAAELTIPLQIVLPRHPARDPHADDPAYLRTVLDEPRYQHVPIVLVSPLRLHPHAIALARQYPQVLLDPGPSFLAYPGLASATIRELVTSVPTLKLLASTGGHFLPEHQWFVARVWRLALVEALGSLVEDGLLTLAEAEMDAMLILAGNAQRTYRFPR
SIO_010081: TRD_RS11780
subclass of: SO_0000673
so part of: TRD_RS11780
location: 565461..566606
location: region:565461-566606:1
so has part: feature:565461-566606:1:exon

WP_012642832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565461-566606:1:exon

TRD_RS11785
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11785
old locus tag: trd_A0573
so part of: sequence
location: 566627..567727
location: region:566627-567727:1
so has part: feature:566627-567727:1:exon
subclass of: SO_0000010

position:566627:1
position: 566627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567727:1
position: 567727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566627-567727:1:exon

TRD_RS11785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11785
old locus tag: trd_A0573
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873237.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Xaa-Pro peptidase family protein
translation: MHDEIAQRLTRFRHALVSSGIDAAIVGPSADFRYLTGHPAASSERLLALVVPQAGETFLLVPELESTRFSETLPFSLRTWKDGEDPIRLLAAHLERLGVGTIGVNDEFWAAFLLPLQAALPTRNFTRVSLILQALRRIKSAAEIALVREAVARVDAAWQRFCASEHLTGRTERQVARRLTELLLEEGLDHVAFCIVASGPHAASPHHEPTDRIIQAGDPVVIDVGGPYHGYFADLTRTPVAGSLADPDFATAYEAVLEAQQAAFAAMRPGASCEEIDRIARDVLATHGLAEAFLHRLGHGLGLSVHEPPYLVQGNPERLEPGMIVTDEPGVYLRGRWGLRIEDVVLITAEGAERLTRAPHELLALP
SIO_010081: TRD_RS11785
subclass of: SO_0000673
so part of: TRD_RS11785
location: 566627..567727
location: region:566627-567727:1
so has part: feature:566627-567727:1:exon

WP_012642959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:566627-567727:1:exon

TRD_RS13945
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13945
old locus tag: trd_A0574
so part of: sequence
location: complement(567736..570006)
location: region:567736-570006:-1
so has part: feature:567736-570006:-1:exon
subclass of: SO_0000010

position:567736:-1
position: 567736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570006:-1
position: 570006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567736-570006:-1:exon

TRD_RS13945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13945
old locus tag: trd_A0574
EC number: 2.7.7.65
inference: COORDINATES: protein motif:HMM:TIGR00254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diguanylate cyclase
translation: MAWDDLDLLIIDQDPVRRGAIARIARELGVRRVQEREEWVPPAEGIRVPGVRVVLLDADISTPHTSELTEAASSGMLLVALVRSERGAEPELLAAGFGAVLYDPVTAVDLERIFALARTLASQGQERERRQFLRFNALRQVETDLALLAELSPDWMQRSLLLLQRILDVAALGLWRIDWEQDRLVCEGAVGLPEEFIRQVEERAQGRAAELVQRVLESVVQPVDMRPDSTDERVITDAAVRRACGLEAGIVVPVRRTGRVAALLSIYFRRYEEVNREEIGLFDAAAEALATAWAISEVRRELFLNQQQYRALVEEQPVGVLLCELNGTVRLANGAAARLLGYERPERLAGTRLPEVVRSLAPIPWEEWCQRPVGAPAAEATIPVLTLDKHLRIIEFHARVIELPMSTRDWFPQVQLVLRDVTLERRRLMELELLHDLTRMVSEDRNLDSAFEMVADRLQREFGYALVGLALLSADGTRFVGRAVRVEGGLTFNEWRADRGVTGRAVRENRAQLVVDVRQDPDYFDPQPDLPMESEVVAVLRREGKPIGVLNIESRRGHRLDQEDLRLALNVAVHLELLMRQVELTEQLERKALTDPLTGQPNRRALLDHLRRALGDRRVEHVAVILIDFDGFKVLNDTKGHLFGDALLQAVAERLARSLRPSDLLARYGGDEFAVVLAGVDLAVAHDIAERLRRAVADTSFQVRDEVVSLTISLGVAASPRHGDTPETLLRAADEALYAAKRRGGNSIAIAGEWSP
SIO_010081: TRD_RS13945
subclass of: SO_0000673
so part of: TRD_RS13945
location: complement(567736..570006)
location: region:567736-570006:-1
so has part: feature:567736-570006:-1:exon

WP_012643069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567736-570006:-1:exon

TRD_RS11795
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11795
old locus tag: trd_A0575
so part of: sequence
location: complement(570116..571399)
location: region:570116-571399:-1
so has part: feature:570116-571399:-1:exon
subclass of: SO_0000010

position:570116:-1
position: 570116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571399:-1
position: 571399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570116-571399:-1:exon

TRD_RS11795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11795
old locus tag: trd_A0575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873239.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MRVRWGEALVALRFREFRLLWAGQFVSMLGTQMQTVALSWLVYDLTGSPAQLGGVALVRAIPTMVLSLFGGTLADQMDRRRLLLLTQSTAAFLLGVLALVVSLGMTSLPLLYLLAFTSAAAMSFDAPARQALIPLLVPRERLANALALNVLAWDVAAIAGPALGGLVIAHVSVAAAFWVDAASYLAVVAALLAMRRDLPVPKLERRGWTAFMDGLRFVRHRPLLWQLMLLDFFAVLLASSTGLLPVFARDVLRVGPDGLGLLFAAPSAGAIVGAGLFALLPTPRWPGQVVAWVVVGYGAALAVFGISRLFVLSFLLLALAGALDAVAMALRHTVRQLATPDAYRGRVGAIAAVFAAGGPRLGQFQAGVLAGAVGPAGAMVIGGVGCVLVAVASRWWAPELWRFCGEELFEAAGAGHRKPRAKPSPSE
SIO_010081: TRD_RS11795
subclass of: SO_0000673
so part of: TRD_RS11795
location: complement(570116..571399)
location: region:570116-571399:-1
so has part: feature:570116-571399:-1:exon

WP_012643130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:570116-571399:-1:exon

TRD_RS11800
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11800
old locus tag: trd_A0576
so part of: sequence
location: 571490..571942
location: region:571490-571942:1
so has part: feature:571490-571942:1:exon
subclass of: SO_0000010

position:571490:1
position: 571490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571942:1
position: 571942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571490-571942:1:exon

TRD_RS11800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11800
old locus tag: trd_A0576
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017596646.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHAPMTRAILYGFLGAVGTAIMVGVPTALIPNPVFGRMIPPDEFDYLVFAATVILASALAATYAWPLACPLPERRIAAGSLATFFAVGCPTCNKLVLLLLGSSGAVQWFAPLQPLLGIAGLALLASALIYRLRLLAPFSHSNQPKRAALD
SIO_010081: TRD_RS11800
subclass of: SO_0000673
so part of: TRD_RS11800
location: 571490..571942
location: region:571490-571942:1
so has part: feature:571490-571942:1:exon

WP_012642454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571490-571942:1:exon

TRD_RS11805
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11805
so part of: sequence
location: 572430..572505
location: region:572430-572505:1
so has part: feature:572430-572505:1:exon
subclass of: SO_0000663

position:572430:1
position: 572430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572505:1
position: 572505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572430-572505:1:exon

TRD_RS11805
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 309801
locus tag: TRD_RS11805
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:572463..572465,aa:Lys,seq:ctt)
SIO_010081: TRD_RS11805
subclass of: SO_0000673
so part of: TRD_RS11805
location: 572430..572505
location: region:572430-572505:1
so has part: feature:572430-572505:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:572430-572505:1:exon

TRD_RS14940
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS14940
old locus tag: trd_A0579
so part of: sequence
location: 573004..573321
location: region:573004-573321:1
so has part: feature:573004-573321:1:exon
subclass of: SO_0000010

position:573004:1
position: 573004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573321:1
position: 573321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573004-573321:1:exon

TRD_RS14940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS14940
old locus tag: trd_A0579
inference: COORDINATES: protein motif:HMM:NF025170.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PCYCGC motif-containing (lipo)protein
translation: MYSRRSLLTGFLLLPLLAACGRSPAKDRHDELIAWPAQDRWPPIFYQASTEAQEAYRYAVTHPQILQYFPCYCGCVEWGHRSVLDCSVREFRADGSVVLDSMTFG
SIO_010081: TRD_RS14940
subclass of: SO_0000673
so part of: TRD_RS14940
location: 573004..573321
location: region:573004-573321:1
so has part: feature:573004-573321:1:exon

WP_012642643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:573004-573321:1:exon

TRD_RS11815
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11815
old locus tag: trd_A0580
so part of: sequence
location: complement(573465..574295)
location: region:573465-574295:-1
so has part: feature:573465-574295:-1:exon
subclass of: SO_0000010

position:573465:-1
position: 573465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574295:-1
position: 574295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573465-574295:-1:exon

TRD_RS11815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11815
old locus tag: trd_A0580
inference: COORDINATES: protein motif:HMM:NF014679.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DegV family protein
translation: MTDSIACLPLELVERYHIRVVPVRIVRGERVYRDGIDVTPEEAFAWLEAGEVLTTAQPAVGEFLDTYEELSRIATGIVSIHVSSGVTGVVQAAAAAARLIERIPIRVVDSRAATMAEGFLVLAAARLAEQGADLETIVRRVKELRSQVRFFAVLDTVTYLVRSGRAPWLAQLAVDMLQVKPILTLRDGKIVSLERVRTRRRAIEAMLRRMEQDVGERPVHVGVLHAGAAEEAAELRQTIEERFQVVESFVTPFTAAMAIHTGPGLLGLAYCAESPA
SIO_010081: TRD_RS11815
subclass of: SO_0000673
so part of: TRD_RS11815
location: complement(573465..574295)
location: region:573465-574295:-1
so has part: feature:573465-574295:-1:exon

WP_169302314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:573465-574295:-1:exon

TRD_RS11820
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11820
old locus tag: trd_A0581
so part of: sequence
location: complement(574314..574955)
location: region:574314-574955:-1
so has part: feature:574314-574955:-1:exon
subclass of: SO_0000010

position:574314:-1
position: 574314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574955:-1
position: 574955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574314-574955:-1:exon

TRD_RS11820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11820
old locus tag: trd_A0581
inference: COORDINATES: protein motif:HMM:NF014690.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate acyltransferase
translation: MESVLLLLAGYLLGSVPTAQIAAQLLAGVDLRERSPTISGSGVYYLVARWAVVPVGLIDVLKGYLATVLPLQVGASSELAMACGLAAVVGHNWSLWLGFRGGRGISPFLGFLLVVFPMGVFVVLAALAIGRLVRRTPVVALLGLLSLPGVIIALGGSDAALRGSLGMLAITIVKRLEANRRRLPRDPVARQTVLWRRFWLDRDEERWPPAMEG
SIO_010081: TRD_RS11820
subclass of: SO_0000673
so part of: TRD_RS11820
location: complement(574314..574955)
location: region:574314-574955:-1
so has part: feature:574314-574955:-1:exon

WP_012642379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:574314-574955:-1:exon

TRD_RS11825
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11825
old locus tag: trd_A0582
so part of: sequence
location: 575050..576633
location: region:575050-576633:1
so has part: feature:575050-576633:1:exon
subclass of: SO_0000010

position:575050:1
position: 575050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576633:1
position: 576633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575050-576633:1:exon

TRD_RS11825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11825
old locus tag: trd_A0582
inference: COORDINATES: protein motif:HMM:NF025064.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DAK2 domain-containing protein
translation: MDHPFAEHVTRESEVARQCWDGCTFVAALEAAVLALGEHAASLDALNVFPVADRDTGTNLFLTAQAALRAARAASDTSLTVVTRSAAHAALRAAHGNSGVILSQFFRAWAEIAAQREYLDAAAMAAGFARADTLARQALLEPVEGTMITVLRAAAAAAQEAEAAGLPLAEILARVRDAALTAVARTPELLPILRQQGVVDAGAQGLAVLLDAWAAAARGERPTLAPLRTTPPPTHSGAGDPVGYCFNALLRVLSDRRDELLRTLAPYGESIEIVGDDALLRVHLHTQQPDLVIACLRAYGRLDSLAVEPLSADGQETILTEARGSALLVLSPAPTIRAWARRSGALALAPSPTLTEPERLAARLATLPVDRLLVLPARQEDAALVREAARQLKQPTLVVLPAHSLAAQLTALLVYEPGQGDRAEEKLVDLLTRLRTVEIDQEGTSATPRWIARSGPWHAMHATPEEALRAGLAHLHAQEAELCTLVIGEAIGEVAGLHRAIRAHWPHLQIDFFWGHQPAPALSIALE
SIO_010081: TRD_RS11825
subclass of: SO_0000673
so part of: TRD_RS11825
location: 575050..576633
location: region:575050-576633:1
so has part: feature:575050-576633:1:exon

WP_012643210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:575050-576633:1:exon

TRD_RS11830
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11830
old locus tag: trd_A0583
so part of: sequence
location: complement(576876..577241)
location: region:576876-577241:-1
so has part: feature:576876-577241:-1:exon
subclass of: SO_0000010

position:576876:-1
position: 576876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577241:-1
position: 577241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576876-577241:-1:exon

TRD_RS11830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11830
old locus tag: trd_A0583
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: METRPSVRTTGLSELIAALWRRGVPVVGWAESREGIVLLADGGASVLIPRARLGERTDLVANALVERLPRRAVLETPVSPELLPQFDQRELAWLLFLRWLRERNQVEPAIPSPERVHPVDG
SIO_010081: TRD_RS11830
subclass of: SO_0000673
so part of: TRD_RS11830
location: complement(576876..577241)
location: region:576876-577241:-1
so has part: feature:576876-577241:-1:exon

WP_012643091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:576876-577241:-1:exon

TRD_RS11835
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11835
old locus tag: trd_A0587
so part of: sequence
location: complement(578251..579186)
location: region:578251-579186:-1
so has part: feature:578251-579186:-1:exon
subclass of: SO_0000010

position:578251:-1
position: 578251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579186:-1
position: 579186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578251-579186:-1:exon

TRD_RS11835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11835
old locus tag: trd_A0587
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007922880.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: U32 family peptidase
translation: MERTRAFLERLGLPRGDLHDLPTSTKRFPDGAQYRIEIPSTEGPRVLAAVIEEAKRHGIVVHRISQGSGVMLLTDEEIREMAALAAAEGMEVSLFARPSAGWDIGAMARTPAGALVSAKLRGQEQLVHCLEDVRRAADLGIRSVLLADEGALWVASEMRRAGELPRDMQFKVSVLMGAANPASVALLVRLGADTYNVVTDLSLAQLAAIRAAVDVPLDIYVEVPDDVGGFVRHYEIAEIVRVCAPVYLKFGLRNAPNIYPSGRHLEELAVQLGRERVRRAAIGLALLHRYYPDAVGSRPGAAGLALPVVDR
SIO_010081: TRD_RS11835
subclass of: SO_0000673
so part of: TRD_RS11835
location: complement(578251..579186)
location: region:578251-579186:-1
so has part: feature:578251-579186:-1:exon

WP_012642555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578251-579186:-1:exon

TRD_RS11840
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11840
pseudo: true
so part of: sequence
location: complement(579208..580197)
location: region:579208-580197:-1
so has part: feature:579208-580197:-1:exon
subclass of: SO_0000010

position:579208:-1
position: 579208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580197:-1
position: 580197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579208-580197:-1:exon

TRD_RS11840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11840
inference: COORDINATES: protein motif:HMM:NF014684.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ABC transporter permease
SIO_010081: TRD_RS11840
subclass of: SO_0000673
so part of: TRD_RS11840
location: complement(579208..580197)
location: region:579208-580197:-1
so has part: feature:579208-580197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:579208-580197:-1:exon

TRD_RS11845
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11845
old locus tag: trd_A0590
so part of: sequence
location: complement(580280..581116)
location: region:580280-581116:-1
so has part: feature:580280-581116:-1:exon
subclass of: SO_0000010

position:580280:-1
position: 580280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581116:-1
position: 581116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580280-581116:-1:exon

TRD_RS11845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11845
old locus tag: trd_A0590
inference: COORDINATES: protein motif:HMM:NF024874.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MEGVAAILQRLAQRHDSLGIVWLGQASVALAGSGRIVLIDPFLSPHPDRLVPPMVAPEELASVDLVLVTHEHWDHLDGPTCAAIARVAPGARFACPQPIVDQFGALGIDRERVQGMRPGQAEVFADVTVWPVAAMHGLHAADAYGFGEVDGVPRFLGYVVELAGVRLYHAGDTIAYAGLAETVRALRPQVAMLPINGRDWYREQMDIVGNLDIREAAHLAADIGVELLIPLHYDMFAANLADPGALVRYVHDRKLPVHVLVLRPGKPVLVQPVGREEL
SIO_010081: TRD_RS11845
subclass of: SO_0000673
so part of: TRD_RS11845
location: complement(580280..581116)
location: region:580280-581116:-1
so has part: feature:580280-581116:-1:exon

WP_012643301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:580280-581116:-1:exon

TRD_RS11850
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11850
old locus tag: trd_A0591
so part of: sequence
location: complement(581127..582281)
location: region:581127-582281:-1
so has part: feature:581127-582281:-1:exon
subclass of: SO_0000010

position:581127:-1
position: 581127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582281:-1
position: 582281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581127-582281:-1:exon

TRD_RS11850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11850
old locus tag: trd_A0591
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005460340.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mandelate racemase/muconate lactonizing enzyme family protein
translation: MRIVDVKTYVLGTAWRNLTFVEVHTDEGITGVGEARMLNHTDALLGYLAEAVPNHVLGRDPFQIEDLVFHMMRDDYARPDYVMMSGIAAIEIACWDIMGKALGLPVYQLLGGAVRDRIKAYANGWYTVERTPEQFAEAARRVVERGYRALKLDPFGAGYYELDLAEKRRVIALVEAVRDAVGSEVEILIEMHGRFNPATAIEMARLLEPYQPSWIEEPVPPHNLAALKKVAEQVRIPVATGERIHTRYDFRELFELQAADIIQPDITHLGGLLETKKLAAWADAYYVLVAPHNVCGPVGTAANLHLAACTTNFKIQEHFNDFAEAHVKAAAPGVPDVVDGYFPLPQGPGLGVQLDHSVVAQHPRRRVFFNLFAEEWHRRQAERE
SIO_010081: TRD_RS11850
subclass of: SO_0000673
so part of: TRD_RS11850
location: complement(581127..582281)
location: region:581127-582281:-1
so has part: feature:581127-582281:-1:exon

WP_012642878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581127-582281:-1:exon

TRD_RS11855
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11855
old locus tag: trd_A0592
so part of: sequence
location: complement(582300..583805)
location: region:582300-583805:-1
so has part: feature:582300-583805:-1:exon
subclass of: SO_0000010

position:582300:-1
position: 582300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583805:-1
position: 583805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582300-583805:-1:exon

TRD_RS11855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11855
old locus tag: trd_A0592
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014046027.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter ATP-binding protein
translation: MAEPILEARQITKRFPGVVALEGVSLTVFPGEVLAVVGENGAGKSTLMKILSGALQPDEGEILLQGRPVRFSDPRQALERGIGIIYQELSVIDALSVGENVFLGRLPQRSGLPGAVDWPRVWHEAAQVLARVGAPIDPRQPVRGLSIAQKQLVEIARALSQDVRVLILDEPTSALSLQETERLFEILRGLRAQGVAIIYISHRLEEVFALADRVTVLRDGRVVGTLPIGEATRDGLIRMMVGRDLSAYFREVQSSPGVPRLEVRGLARADVLHDVSLTVRAGEIVGLAGLVGAGRTELARCLFGVDPIDAGEILVDGRPTRIRSPREAVQHGIVLVPEDRKLEGLVSSLSVRENVSLSVLARLARFGFPSRRREEELARSFVQRMRIRTPSLEQRVLNLSGGNQQKVVLARALATNPKVLILDEPTRSIDVGAKAEVHALIAEMAETGMAILSISSELPEVLSMSHRIVVMSGGRIVAEFARGEATEERVLRAATGQRVAA
SIO_010081: TRD_RS11855
subclass of: SO_0000673
so part of: TRD_RS11855
location: complement(582300..583805)
location: region:582300-583805:-1
so has part: feature:582300-583805:-1:exon

WP_012643023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:582300-583805:-1:exon

TRD_RS11860
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11860
old locus tag: trd_A0593
so part of: sequence
location: complement(583867..584742)
location: region:583867-584742:-1
so has part: feature:583867-584742:-1:exon
subclass of: SO_0000010

position:583867:-1
position: 583867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584742:-1
position: 584742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583867-584742:-1:exon

TRD_RS11860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11860
old locus tag: trd_A0593
inference: COORDINATES: protein motif:HMM:NF024799.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar-binding protein
translation: MPTVAPGTKITIAMVPKLVHPFFEDCRKGGEQKAKELGVTFEYVAPQQADPALQVKIIEDLIRKKVHAISISPNEPKSVEPVIAEGMKQGILMMTFDADSPNSQRVMYIGTDNKAAGKTMGETMAKLLNGRGKVGIITGGLGALNLNQRIEGFKEGVGPNIQVVDVQATDDDLQKGLSVSEAMLRAHPDLNGIACVSATGGPTLAQVLKSPEFQDRIGKLVIVAFDDLEETKRAIQEGIIAATMVQRPVQMGVLTVQWAYDILTGKAKPPFKNIDTGVTVVTKENLNSYTK
SIO_010081: TRD_RS11860
subclass of: SO_0000673
so part of: TRD_RS11860
location: complement(583867..584742)
location: region:583867-584742:-1
so has part: feature:583867-584742:-1:exon

WP_143714805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:583867-584742:-1:exon

TRD_RS11865
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11865
old locus tag: trd_A0594
so part of: sequence
location: complement(585101..585937)
location: region:585101-585937:-1
so has part: feature:585101-585937:-1:exon
subclass of: SO_0000010

position:585101:-1
position: 585101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585937:-1
position: 585937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585101-585937:-1:exon

TRD_RS11865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11865
old locus tag: trd_A0594
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018556709.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator
translation: MARRVPAVERALDILELFLRTPQPESLSVPEIARALGLPRSTAHELVATLVARRYLRPIEGNPHRFALDARVFELGNAYASGLDLAREGQQVAREIAARCDETVHIAVLEGRDVFYIAKVDSTNALRLVSAIGRRLPAHCTAVGKMLLSSLTDEELEERFAGVDLLPTMTRNSIRTLAELRSELERTRARGLAWDNCESNPDVRCVAAPIYDHRGRMVAAMSISFPVVRDTPERFLELSRLVRRGARDVSLRLGARQLARDTEEPELPPWHLPAVADG
SIO_010081: TRD_RS11865
subclass of: SO_0000673
so part of: TRD_RS11865
location: complement(585101..585937)
location: region:585101-585937:-1
so has part: feature:585101-585937:-1:exon

WP_012642935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:585101-585937:-1:exon

TRD_RS11870
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11870
old locus tag: trd_A0596
so part of: sequence
location: 586344..586976
location: region:586344-586976:1
so has part: feature:586344-586976:1:exon
subclass of: SO_0000010

position:586344:1
position: 586344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586976:1
position: 586976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586344-586976:1:exon

TRD_RS11870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11870
old locus tag: trd_A0596
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMQVRWIGVLLLVALALSWAAAPVAGDAGITEHRPATRPLDPSATAVPSLITDRSSSLTTPSVAGSTQPTAEPPTGADQTAGKVDPPNPVGTSGGDDATTRVLPDRSPVITEPTPGETISSPDGNPPQDADDSAAPAGSPVTTATQPTGSRFVTSPSSGKSPDTSERAQVAPQTGSGFTPAVLALLTTSLLGSFCLLLGLALSTLARRHH
SIO_010081: TRD_RS11870
subclass of: SO_0000673
so part of: TRD_RS11870
location: 586344..586976
location: region:586344-586976:1
so has part: feature:586344-586976:1:exon

WP_012642738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586344-586976:1:exon

TRD_RS11875
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11875
old locus tag: trd_A0597
so part of: sequence
location: complement(586989..588284)
location: region:586989-588284:-1
so has part: feature:586989-588284:-1:exon
subclass of: SO_0000010

position:586989:-1
position: 586989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588284:-1
position: 588284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586989-588284:-1:exon

TRD_RS11875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11875
old locus tag: trd_A0597
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873084.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HD domain-containing protein
translation: MTCNERYVTVVRDSLYDRIPLTRAEVALISTPTFQRLDRIQQLGFVSKIWPGAKHTRYEHSLGVLHLMRQALATLRRHDAGWIDDETRRTALAAALLHDVGHYPFSHAIEELGRPVLPHEEVGRQLIERSELAEVLEREWAVEPRRVADLIAPRGALAAAYRLVRGLLSGALDVDKLDYLPRDARHCNVPYGGVDTPRLLDALRVADVHGVPRVVVTAKGVSPLHSLINARQEMFDNVYWHHANRAAMAMLQRAVQDALLVGAITAEELPRHDDASLLARLSEPGMPESTRQLVLRLRDRVLHKRALEVSARAPDLYRYLSSLYGRPAARRELEGVLAQRLSDLLGEPVADWEVLLAIPKPEKWSTDVWVLFERPPLGFQPLMPWQDVVGLTDADFARFEEHRRLIRVVTTARLREAVARHWPRLLLPLLQ
SIO_010081: TRD_RS11875
subclass of: SO_0000673
so part of: TRD_RS11875
location: complement(586989..588284)
location: region:586989-588284:-1
so has part: feature:586989-588284:-1:exon

WP_012642895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586989-588284:-1:exon

TRD_RS11880
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11880
old locus tag: trd_A0598
so part of: sequence
location: 588359..589279
location: region:588359-589279:1
so has part: feature:588359-589279:1:exon
subclass of: SO_0000010

position:588359:1
position: 588359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589279:1
position: 589279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588359-589279:1:exon

TRD_RS11880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11880
old locus tag: trd_A0598
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873083.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: proline dehydrogenase family protein
translation: MPWFRSLVLAIARQPWVERLVRESSLTLPVVTRFVAGESMAEALAVARALADRGFATTLDLLGEEVATPGEAAAATQAYAELLNALSDRGLDSTISVKPTHLGLRLDPTLARLNLERLARLAQRLGRRVEVDMEDSSTTRATLDLFAALHTTYGDHLQIALQAYLYRTEGDIDTAVARGWRVRLVKGAYAEPATVAYPTKAAVDAAYRRHLETLLEYGRFVAVATHDEAILRVARGFARRIGVGPEKYEFQMLYGVRRDLQEQLRRAGEPVRVYVPFGRQWYPYFTRRLAERPANLVFLLGQLVKR
SIO_010081: TRD_RS11880
subclass of: SO_0000673
so part of: TRD_RS11880
location: 588359..589279
location: region:588359-589279:1
so has part: feature:588359-589279:1:exon

WP_012643025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588359-589279:1:exon

TRD_RS13950
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13950
old locus tag: trd_A0599
so part of: sequence
location: 589486..590925
location: region:589486-590925:1
so has part: feature:589486-590925:1:exon
subclass of: SO_0000010

position:589486:1
position: 589486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590925:1
position: 590925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589486-590925:1:exon

TRD_RS13950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13950
old locus tag: trd_A0599
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO component: GO:0009986 - cell surface [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: LPXTG cell wall anchor domain-containing protein
translation: MSSVRPARVVLLRLVALATILVLVLPALGAAAVSADERLGPNEVSVHPTKTVVNTVEASPISVGLPTILPTRPSECPSTDQTSAVPVEPQEAPEQEHQVKYPPTLPAIQAPKGTATSQDEATTTAGDEQTGLGKSSTAFPDLIKVEAANPTTQPDEQQQATPSAADNGNCPTTDDTSDSGLPRGNTGNGSGDGNGHTTPSYTCGGKEYVLEQPGWYYCLDFRKIWLNADDLVTSPPSGASVSLDISLNDQFLGSFECTETGCEPLVVFLANFDPDTAVFHIEENGLPQGWQLHPDYQDGATFLELRDPPGQGPGPACLNTRWRNYSDLYVTECLLVIANQQVASTGGTGEDNSGGGGQGGSGQDGSGGGTGSSGGTGSQGGSGGSTGGASTAPGTSSVPASEAASPRSDAQPAGSSEALALQQPATDVSPASSAGSTMPPLPQVLPRTGQRQALTSLAGIGLVLLGCGVILLRRPARAR
SIO_010081: TRD_RS13950
subclass of: SO_0000673
so part of: TRD_RS13950
location: 589486..590925
location: region:589486-590925:1
so has part: feature:589486-590925:1:exon

WP_052294136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589486-590925:1:exon

TRD_RS11895
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11895
old locus tag: trd_A0600
so part of: sequence
location: complement(591585..591794)
location: region:591585-591794:-1
so has part: feature:591585-591794:-1:exon
subclass of: SO_0000010

position:591585:-1
position: 591585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591794:-1
position: 591794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591585-591794:-1:exon

TRD_RS11895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11895
old locus tag: trd_A0600
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVSLTVAVGAFVVGFVETTVRHTGRVDSSQERCQAYGLVSNGVGLGTPIARFSGTVLLTTELLALLGA
SIO_010081: TRD_RS11895
subclass of: SO_0000673
so part of: TRD_RS11895
location: complement(591585..591794)
location: region:591585-591794:-1
so has part: feature:591585-591794:-1:exon

WP_012642450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:591585-591794:-1:exon

TRD_RS11900
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11900
old locus tag: trd_A0601
so part of: sequence
location: 591927..592817
location: region:591927-592817:1
so has part: feature:591927-592817:1:exon
subclass of: SO_0000010

position:591927:1
position: 591927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592817:1
position: 592817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591927-592817:1:exon

TRD_RS11900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11900
old locus tag: trd_A0601
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012643067.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVGERKTAGSRPILAALGCLGAGLLLVFGLTIGASIGYLVYRTRTQGSAPTATPAPLARVTATAEPTVRPATPTATAPQRPTPTRVSRPTPSPAPSPTLPPLPTPTTAPPPTPSPTPAPAPAPTNPPSVAATPRTIEGWQEYRDPGYLRVQIPPGWLVVTTPEAPEYNLHSCHCYWMLMSQQMVQNSPSAEDVAAWFDSMGPDDLAPGGVLIEILRADSEYAPPVDWGTPFSRVEIRPGFPAEYYVLDPAGRKWGFRYRDARGRSWAIIVKTNDVLTGKSPTLIDISAILETIDHR
SIO_010081: TRD_RS11900
subclass of: SO_0000673
so part of: TRD_RS11900
location: 591927..592817
location: region:591927-592817:1
so has part: feature:591927-592817:1:exon

WP_012642405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:591927-592817:1:exon

TRD_RS11905
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: cbiM
locus tag: TRD_RS11905
old locus tag: trd_A0602
so part of: sequence
location: 593040..594080
location: region:593040-594080:1
so has part: feature:593040-594080:1:exon
subclass of: SO_0000010

position:593040:1
position: 593040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594080:1
position: 594080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593040-594080:1:exon

TRD_RS11905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: cbiM
locus tag: TRD_RS11905
old locus tag: trd_A0602
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014825299.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobalt transporter CbiM
translation: MHIPDGYISPATALAYWGGILPFWYIASQRLRRLLVGRTVPALALFSAFVFVVMMFNVPVPGGTTAHAVGSVLAAIVLGPWAAIVATSVALIVQALFFGDGGILAIGANCFILGVAMPLAGYGIYRLLAGSSPLESRRRVIAAAAAGYFGINVAALLVGLTLGVQPLLWSENGRALYSPYGLEVAVPAMLIPHLTVAGLAEGIVTAAGLTLVHRFYPEVLGSVPSQGPTAARQRSLILLITAVLVLLTPLGLVASGAAWGEWSAEELEQLVGYVPSGLARWEGWWRAPLPDYSLPWMPESASFSEQALAYVLSAIIGIGLVSALIFGLRLLLQPRSPEDRSAASAR
SIO_010081: TRD_RS11905
subclass of: SO_0000673
so part of: TRD_RS11905
location: 593040..594080
location: region:593040-594080:1
so has part: feature:593040-594080:1:exon

WP_012642740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:593040-594080:1:exon

TRD_RS11910
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: cbiQ
locus tag: TRD_RS11910
old locus tag: trd_A0603
so part of: sequence
location: 594096..594917
location: region:594096-594917:1
so has part: feature:594096-594917:1:exon
subclass of: SO_0000010

position:594096:1
position: 594096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594917:1
position: 594917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594096-594917:1:exon

TRD_RS11910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: cbiQ
locus tag: TRD_RS11910
old locus tag: trd_A0603
inference: COORDINATES: protein motif:HMM:NF014420.2
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0032778 - P-type cobalt transporter activity [Evidence IEA]
GO process: GO:0006824 - cobalt ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cobalt ECF transporter T component CbiQ
translation: MARRSFLEKTLADLATTLEHTVYTEEIARRSGLLQRLDARVKVVLLGFALLVAASLQTALMQLALLVLLLILFAASRIPASIVVRLGLGLPVFTLLVAVPALFVVPGPPLLHLPFGLTISTTGAWSVLTLLLRVTTSVLAAAALMLTTRWSDLLAALRTLRIPLVFVVVLAMAYRYVFVLLELVQDLLLARRSRTLSAIPGPEQRRWLTTALAVLFQRSLRTSELVYQAMTARGFRGEPRTLRPRALTEADWFALSVGSAACAALWLIDLAHP
SIO_010081: TRD_RS11910
subclass of: SO_0000673
so part of: TRD_RS11910
location: 594096..594917
location: region:594096-594917:1
so has part: feature:594096-594917:1:exon

WP_012642706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:594096-594917:1:exon

TRD_RS11915
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11915
old locus tag: trd_A0604
so part of: sequence
location: 594914..595732
location: region:594914-595732:1
so has part: feature:594914-595732:1:exon
subclass of: SO_0000010

position:594914:1
position: 594914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595732:1
position: 595732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594914-595732:1:exon

TRD_RS11915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11915
old locus tag: trd_A0604
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011306075.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MRTVFELHRVSYAYHGRIPALVDVDLTIAAGEALVVLGPNGSGKSTLLKILDGLYRPSSGQIFAFGRDITSAADDPELGYWLHQRVGLVFQEPDVQLFSPTVFDDVAFGPLQLGWSPDRVRDAVQRVLAELALEHLADRAPFELSGGEKKRVALATVLVMEPEVILLDEPTANLDPRSRAQLIELLATLHARGHTLVIATHELDLAAALGTRLIVFGEREHRPIAEGAPAQVLADHELLLTANLIHEHLHWHGSLQHSHPHWHDPEHQHDHD
SIO_010081: TRD_RS11915
subclass of: SO_0000673
so part of: TRD_RS11915
location: 594914..595732
location: region:594914-595732:1
so has part: feature:594914-595732:1:exon

WP_041437335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:594914-595732:1:exon

TRD_RS11920
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11920
old locus tag: trd_A0605
so part of: sequence
location: complement(595797..596801)
location: region:595797-596801:-1
so has part: feature:595797-596801:-1:exon
subclass of: SO_0000010

position:595797:-1
position: 595797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596801:-1
position: 596801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595797-596801:-1:exon

TRD_RS11920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11920
old locus tag: trd_A0605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008479641.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MTERELQELLELEELIASEGLEEVEEIEEIEESDDLIDQAANDAVYRYFREVGGHRLLTHQEEIEYSRAVRAGLAARKRIEAGEDTPELRELVRKGQEAREKLIRHNLRLVVSIAKRYRSSELPLIDLIQEGNIGLMTAVERYDPELGYRFSTYATFWIRQAIGRAVANLSRTIRVPVHMHDLIAKIRRAEAQIEQQKGRPATNEELAELLGIDVARIEQARTQIPRTSSLDKPIGEDGESSIGDLLPDPRSDDVVEEALTNAIREQIRRSLEQLTERERTVLVMRFGLDGEQPRTLAEIADALKISRERVRQVEKEALQKLRNSDLRLLASAA
SIO_010081: TRD_RS11920
subclass of: SO_0000673
so part of: TRD_RS11920
location: complement(595797..596801)
location: region:595797-596801:-1
so has part: feature:595797-596801:-1:exon

WP_012643088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:595797-596801:-1:exon

TRD_RS11925
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11925
old locus tag: trd_A0606
so part of: sequence
location: complement(596904..598061)
location: region:596904-598061:-1
so has part: feature:596904-598061:-1:exon
subclass of: SO_0000010

position:596904:-1
position: 596904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598061:-1
position: 598061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596904-598061:-1:exon

TRD_RS11925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11925
old locus tag: trd_A0606
inference: COORDINATES: protein motif:HMM:NF012318.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trypsin-like peptidase domain-containing protein
translation: MEQRSSVRQRILPLLVVIGFLIAGVIGGLAGASLAGERGAGRSTVSIAVTAPAESHPQPVAEVQATTVAGQVYQRYGKAVVDVIAQTSNGFFDEQGAGSGVVIDQRGLIVTAAHVVAGTSTVEIRFGTGERVSAQVLGTDEANDIALLRVDRLPEGVPVAVLGDSDRVQVGDVVVAIGNPFGLSGTVTQGIVSAVNRSWNPPGDRLRTGLIQTDAPINPGNSGGPLFDAQGEVIGITTMIESPIRGNVGIGFAVPSNTVKRVLPQLEQGAQLEPAWLGISGTDLDAQRARRFGLSVDRGVIVLSVVPGSPAARAGLRPAQMSGLDITQLGDVIVAIDGQPVAGMQDLAARIGAHQPGDTVELTVLRDGRQQTVRVTLGRWPQQQG
SIO_010081: TRD_RS11925
subclass of: SO_0000673
so part of: TRD_RS11925
location: complement(596904..598061)
location: region:596904-598061:-1
so has part: feature:596904-598061:-1:exon

WP_012643246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:596904-598061:-1:exon

TRD_RS11930
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11930
old locus tag: trd_A0607
so part of: sequence
location: complement(598179..599618)
location: region:598179-599618:-1
so has part: feature:598179-599618:-1:exon
subclass of: SO_0000010

position:598179:-1
position: 598179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599618:-1
position: 599618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598179-599618:-1:exon

TRD_RS11930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11930
old locus tag: trd_A0607
inference: COORDINATES: protein motif:HMM:NF014567.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MSIRLRLTLLYSGILVCTLVIFSVVLYVLVARFSLQWQERALAEEAAQIVTQGEFRLTVIRTPQGKVAIPQTFVQTRDLSGQVISRSINLNGYELPLSSQGLTALTNGQATGWLEIVRTDNGRLLVYSRTVTANGQPVGILQVARPLADLDQALAMLRRYLTVGTVVSTITAFFVGWVLAGASLRPINRITQIAREIGQARDFSRRVDYDGPNDEIGALVTTLNEMLTELQAAYQQVEHALQAQRRFVADASHELRTPLTTLRGNVELLQREPPLPLEEQRAILADVAAEIERMIRLVRELLTLARADAGLRPRLEPVQLGSLVEDAVRQAQLLRPRPVARVRVERDVVVRADRDLLYQVLLILLDNALKYTPEDGMVEATVVVEQGRAGIAVRDTGIGIDPAIMPHIFERFFRGDSARSGEGTGLGLAIAKSLLEAMRGEIRVVSRPGEGSIFTVLLPVEPASAEGEAQAAPSLVSPA
SIO_010081: TRD_RS11930
subclass of: SO_0000673
so part of: TRD_RS11930
location: complement(598179..599618)
location: region:598179-599618:-1
so has part: feature:598179-599618:-1:exon

WP_012642673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:598179-599618:-1:exon

TRD_RS11935
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11935
old locus tag: trd_A0608
so part of: sequence
location: complement(599625..600302)
location: region:599625-600302:-1
so has part: feature:599625-600302:-1:exon
subclass of: SO_0000010

position:599625:-1
position: 599625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600302:-1
position: 600302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599625-600302:-1:exon

TRD_RS11935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11935
old locus tag: trd_A0608
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003886532.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MTHVLVVDDDTRLVEMLRRTLSYEGFTVSVAQSGDEALRLVAERRPDLIVLDWLLPGMDGLAVVQRLRAAGDGTPILMLTARDAVEDRVLGLDSGADDYLVKPFAPAELLARIRALLRRVEPASDEKPLVFADLVLDPVTRETRRGDRSFRLSPREFDLLSYFMRHPRRVLTRNQILLAVWGHDFDGYDSVLDVYIGYLRQKLEAGGEPRLIHTVRGVGYVLRES
SIO_010081: TRD_RS11935
subclass of: SO_0000673
so part of: TRD_RS11935
location: complement(599625..600302)
location: region:599625-600302:-1
so has part: feature:599625-600302:-1:exon

WP_012642567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:599625-600302:-1:exon

TRD_RS11940
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11940
old locus tag: trd_A0609
so part of: sequence
location: 600453..601259
location: region:600453-601259:1
so has part: feature:600453-601259:1:exon
subclass of: SO_0000010

position:600453:1
position: 600453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601259:1
position: 601259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600453-601259:1:exon

TRD_RS11940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11940
old locus tag: trd_A0609
inference: COORDINATES: protein motif:HMM:NF016176.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YceI family protein
translation: MRTQHRLGALFERMAIIAAIAALLLAACGGSAAPTATPLPATPLAPSPTPMPTALIPGPVDTPTAVSTASPTPTRAMMATPATGSEASAGLIFRIVPEQSEARYRVREQLLGRSLPNDAVGSTRAIEGRIVFMADGAIDSAQSRVTVDLTTLRSDEARRDNYIKQNTLEVARFPKAEFQPTAARGLPWPLPQSGEFSFQLEGNLTVHGVTKPVVWDVRATVDGSRITGTATTTVTFADFGMTQPRVPIVLSVEETITLELDFTVEPQS
SIO_010081: TRD_RS11940
subclass of: SO_0000673
so part of: TRD_RS11940
location: 600453..601259
location: region:600453-601259:1
so has part: feature:600453-601259:1:exon

WP_012642848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:600453-601259:1:exon

TRD_RS13955
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13955
old locus tag: trd_A0610
so part of: sequence
location: 601256..602374
location: region:601256-602374:1
so has part: feature:601256-602374:1:exon
subclass of: SO_0000010

position:601256:1
position: 601256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602374:1
position: 602374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601256-602374:1:exon

TRD_RS13955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13955
old locus tag: trd_A0610
inference: COORDINATES: protein motif:HMM:NF013866.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MRRPARFTRRLLLLSSLGIAAACRNRPNPTQTPSLPSPTSSLGPGSTVTTAPRPSPFLQPTPSVTPTATPSSQPSPSPTLLPSPTPHPLAAYTIEGLRARQYRGGQIELLRTVTETDTYTYFHIRYPSDGLRITGGLHRPHGPGPFPVVILCHGYIPPDQYWTGADTIQAADELARRGYLCLAPDFRGWGGSDTGPNYFRTGIVIDTLELISSLSSLPEADPTRVGLWGHSMGGGLVAKAICIDDRIRAAVLYAPVSGWDLDNIRKWGNGARPDDPLGPLYAQAAQDETFLRSTSPLFHFHFVNCPVQIHVGTADTVTPPEWSRAIRDSLLLAGKRVEYFEYPGEGHAFSPPAWRQFIERTVLFYDRTLRTP
SIO_010081: TRD_RS13955
subclass of: SO_0000673
so part of: TRD_RS13955
location: 601256..602374
location: region:601256-602374:1
so has part: feature:601256-602374:1:exon

WP_012642814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:601256-602374:1:exon

TRD_RS11950
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11950
old locus tag: trd_A0611
so part of: sequence
location: 602420..603073
location: region:602420-603073:1
so has part: feature:602420-603073:1:exon
subclass of: SO_0000010

position:602420:1
position: 602420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603073:1
position: 603073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602420-603073:1:exon

TRD_RS11950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11950
old locus tag: trd_A0611
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873632.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MHLSETYRRIVQCGGIVRRANETAELEACSDELLVRRVADGDTRAFELLYDRYARPVYSLACRMLGDPSEAEELLQETFLRFWQQASRFEARRGSFGSWLMSIAHNLAIDTLRARRRRPQRADFVDLTTLPWHEIDQAASAHEAAEASELRDRVRRAMAQLPEPQRLAIELAYYAGLTHSEIAAVLGEPIGTIKTRLRLGMQKLQQLLREQPAERAP
SIO_010081: TRD_RS11950
subclass of: SO_0000673
so part of: TRD_RS11950
location: 602420..603073
location: region:602420-603073:1
so has part: feature:602420-603073:1:exon

WP_012643133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:602420-603073:1:exon

TRD_RS11955
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11955
old locus tag: trd_A0612
so part of: sequence
location: 603070..603828
location: region:603070-603828:1
so has part: feature:603070-603828:1:exon
subclass of: SO_0000010

position:603070:1
position: 603070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603828:1
position: 603828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603070-603828:1:exon

TRD_RS11955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11955
old locus tag: trd_A0612
inference: COORDINATES: protein motif:HMM:NF021604.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anti-sigma factor
translation: MTEPAPQVANCPDDLLPGYALGVLDPEELEVVEHHLARCARCRAVTAELRSTAQLLAFAPAPQPVPARARRRLRAELHLRQPASSLVAWLRRPAWLLATAATVLAAFFGWQLLQQQQVAQQRAQLASQADSQRRAVVQLLAQRDGLLIRLQGHGAARDAHGAIILDPSSNTALIAVEGLPRPAPGQAYVVWLVRGEDYRQAGILPIDEHGHAELFLSPREPLRLYDALAITLETNAQATSPNGQPVAVASLN
SIO_010081: TRD_RS11955
subclass of: SO_0000673
so part of: TRD_RS11955
location: 603070..603828
location: region:603070-603828:1
so has part: feature:603070-603828:1:exon

WP_012643244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:603070-603828:1:exon

TRD_RS11960
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11960
old locus tag: trd_A0613
so part of: sequence
location: complement(603830..604933)
location: region:603830-604933:-1
so has part: feature:603830-604933:-1:exon
subclass of: SO_0000010

position:603830:-1
position: 603830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604933:-1
position: 604933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603830-604933:-1:exon

TRD_RS11960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11960
old locus tag: trd_A0613
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008479345.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminopeptidase
translation: MTDPRIAKWARVLVDYSLAVQPEQLVVIGGTPLAAPLIREVYRLVLERGAHPVVQVALPGLAEIMFRVANDQQLTFVSPDERLGPEQADALLRILSESNTKALTGVDPARQQLHQRARTELRQTYLERAAAGKLAWCVTLYPTEAYAQDAEMALAEYEEFVLRAGFLDREDPVTAWREQSREQARIIDWLADKREIHVRAPDTDLRLSIAGRRFVNADGRKNFPDGEIFTGPVEDSVEGTIRFSYPSMVQGRQVEDIRLWFEGGRVVKATAARNEAFLHRMLETDEGARLVGEFAFGLNRSITRFTGNILFDEKIGGTLHLAIGAGYPETGSRNRSAVHWDMICDLRRDSEVWVDGQLFMKDGEILI
SIO_010081: TRD_RS11960
subclass of: SO_0000673
so part of: TRD_RS11960
location: complement(603830..604933)
location: region:603830-604933:-1
so has part: feature:603830-604933:-1:exon

WP_012642807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:603830-604933:-1:exon

TRD_RS11965
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11965
old locus tag: trd_A0615
so part of: sequence
location: 605191..606831
location: region:605191-606831:1
so has part: feature:605191-606831:1:exon
subclass of: SO_0000010

position:605191:1
position: 605191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606831:1
position: 606831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605191-606831:1:exon

TRD_RS11965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11965
old locus tag: trd_A0615
inference: COORDINATES: protein motif:HMM:NF024792.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pilus assembly protein TadG-related protein
translation: MRLVHPATRSSGWRKASPGQVLLLLALILLLLLGFSALAVDVAHAYAERRLLQNAVDAAALAGARALFEGRSPSEARTAAQQAFDGNLSANHDPGEGLTVTQFDVQVDPATRIVRVSARAAIERFFLGALYRGPWETNANAAARVGQKPTDYAFLALERDNPSTVNLIGNVSVRIIGGSAMSNGGMRCVGNGIFQADGTVDAALTFSQTGNCRFQAGQGVRSGLSPVDDPLADMPEPPRPTIPNPPGGPTVTCSSSGNTMTCPPGRYTSAITYSGNGTLSFSGGTYQFDRPVSFSGNGSVVLGPGFYYFDNGFSIGGNASVIMSPGTYVFQGSAFSLGGNVRLTLRGQPTPCTSSGQEFRLYFDQSSFAVQGNFDLVDVLPCDVLVYLRDSDFALTGNTDSNIPPGLYYFERGTFRLQGNQTVTGRDVLFYFGPGSAFDVVGNTRYQLSGVTDPRRLPYPGMQPGLVLFQARGNTATLRMVGNSGARVDGILYLPNGTLDLRGNASGTWARGQLIVNRFTTNGNTDIRIERVEHVVITRPTVWLVE
SIO_010081: TRD_RS11965
subclass of: SO_0000673
so part of: TRD_RS11965
location: 605191..606831
location: region:605191-606831:1
so has part: feature:605191-606831:1:exon

WP_012643040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:605191-606831:1:exon

TRD_RS11970
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11970
old locus tag: trd_A0616
so part of: sequence
location: 606944..607375
location: region:606944-607375:1
so has part: feature:606944-607375:1:exon
subclass of: SO_0000010

position:606944:1
position: 606944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607375:1
position: 607375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606944-607375:1:exon

TRD_RS11970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11970
old locus tag: trd_A0616
inference: COORDINATES: protein motif:HMM:NF019428.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TadE/TadG family type IV pilus assembly protein
translation: MIEQRLRQPGQSLVEFALGLLVLLLVLAAVVDYGRLLYAGIALTNVAREGAHYGSLSSANATDSNGIRTAALTEYRATGLPLLFGSQPTITTSVTFQNGKPDAVRVTATLTVRTMLPVPLPVTGDRLSDQLVIRRTAEMRVLP
SIO_010081: TRD_RS11970
subclass of: SO_0000673
so part of: TRD_RS11970
location: 606944..607375
location: region:606944-607375:1
so has part: feature:606944-607375:1:exon

WP_012642905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:606944-607375:1:exon

TRD_RS11975
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11975
old locus tag: trd_A0617
so part of: sequence
location: 607372..607782
location: region:607372-607782:1
so has part: feature:607372-607782:1:exon
subclass of: SO_0000010

position:607372:1
position: 607372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607782:1
position: 607782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607372-607782:1:exon

TRD_RS11975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11975
old locus tag: trd_A0617
inference: COORDINATES: protein motif:HMM:NF019428.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pilus assembly protein
translation: MTHRARRGQNLVEFALVAPLLFLFIFGIIEFGWAFYVYSELTNAAREGARFAAVHGELCAQHPPCQPATAASVRAHLLPRLSIPDADQVTVQLDGSLTPGERVTVELAYPFRPLVGFAIPSAGLTMRTSSTMIVHY
SIO_010081: TRD_RS11975
subclass of: SO_0000673
so part of: TRD_RS11975
location: 607372..607782
location: region:607372-607782:1
so has part: feature:607372-607782:1:exon

WP_012642877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:607372-607782:1:exon

TRD_RS13960
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13960
old locus tag: trd_A0618
so part of: sequence
location: 607793..609115
location: region:607793-609115:1
so has part: feature:607793-609115:1:exon
subclass of: SO_0000010

position:607793:1
position: 607793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609115:1
position: 609115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607793-609115:1:exon

TRD_RS13960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13960
old locus tag: trd_A0618
inference: COORDINATES: protein motif:HMM:NF021493.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pilus assembly protein TadG-related protein
translation: MRHAARAQALPLLALLLVPLLGFAALGTDAAYLYAQRRLTQNAADAAALAGARELLARAATDSQVVLAATTYAAANGFPPPVPSDSISIIRPDTVRVRLERSVSLFFLPVLGTDSLRIAARATARITQAPGEYALLALEDLITDPGIYANGTTDIYVLGRGPSGHGASVRSNAAIDTRGTVTFIVDGCIDAAGMINQNGTWQYDCLNAELGDYVPDPLAGRVSAPPLSALRYDWRPDCTGYTGSLECRQLPPCAETVTLGPGLYRGLQLPRDLPRASGRGPCTQARIVKFTADPGSVPVVYLDNTTIQLGNTNTRLETQGVLLYVTGTGNLIDPKNGELHLEAPQSIPYPGGLAGMAVWIANCSLFDSQGNGEFYVRGLFYAPCSQVTMHGNPYGTAIEGQVIVRDLTIKGTSDFRVQYRKYVDTYRNTVVLVPNQPDSE
SIO_010081: TRD_RS13960
subclass of: SO_0000673
so part of: TRD_RS13960
location: 607793..609115
location: region:607793-609115:1
so has part: feature:607793-609115:1:exon

WP_012642677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:607793-609115:1:exon

TRD_RS11985
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11985
old locus tag: trd_A0619
so part of: sequence
location: complement(609371..609679)
location: region:609371-609679:-1
so has part: feature:609371-609679:-1:exon
subclass of: SO_0000010

position:609371:-1
position: 609371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609679:-1
position: 609679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609371-609679:-1:exon

TRD_RS11985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11985
old locus tag: trd_A0619
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873637.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GYD domain-containing protein
translation: MPIYVMLSSLTDDGMETLHEHPERIKEVNAEIERLGVKVLHQWAVLGPYDFVNIVEAPDNETIARVSVELGARGTVKLMTMPAIPIDDFIARLKEGRAEGDD
SIO_010081: TRD_RS11985
subclass of: SO_0000673
so part of: TRD_RS11985
location: complement(609371..609679)
location: region:609371-609679:-1
so has part: feature:609371-609679:-1:exon

WP_012643136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:609371-609679:-1:exon

TRD_RS13965
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13965
old locus tag: trd_A0620
so part of: sequence
location: complement(609695..610225)
location: region:609695-610225:-1
so has part: feature:609695-610225:-1:exon
subclass of: SO_0000010

position:609695:-1
position: 609695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610225:-1
position: 610225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609695-610225:-1:exon

TRD_RS13965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13965
old locus tag: trd_A0620
EC number: 2.1.1.-
inference: COORDINATES: protein motif:HMM:NF013742.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MLEELAREAGGDWPLVARLAHLVALAVRGQLALEVGAGPGVVTVWLADAMEQTGGRLVVLEQDPIVIESVTGRLEDLGLMERVQLLQGDAHRTIHTVAGPFDLVRLAADRSGYLDYYRAVRDRLRPGAVILAEGLAREAARPFRETVRAEIDLRTVELPMRGQSLIGVWWPSRGRE
SIO_010081: TRD_RS13965
subclass of: SO_0000673
so part of: TRD_RS13965
location: complement(609695..610225)
location: region:609695-610225:-1
so has part: feature:609695-610225:-1:exon

WP_169302315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:609695-610225:-1:exon

TRD_RS11995
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS11995
old locus tag: trd_A0621
so part of: sequence
location: 610453..611811
location: region:610453-611811:1
so has part: feature:610453-611811:1:exon
subclass of: SO_0000010

position:610453:1
position: 610453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611811:1
position: 611811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610453-611811:1:exon

TRD_RS11995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS11995
old locus tag: trd_A0621
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007289249.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MLSLSQRLDELPLTREHWRIVLLAGIGWMFDAMDVGLVAFVLVSLGRDWNLSRPELGLVASAGFLGMFLGALLAGRLADRYGRRTMFLANLLLYSLGTALCALAWNFPSLILFRFLTGIGLGGELPVAAALVSEFAPARHRGRMLVILESFWAYGWILAAVIGLLVVPQLPSWGWRVAFLIGALPALTAAYLRRQLPESPRYLDIAGRHTEAVAVLRRFEQAASMPPAEVTTTPAPPHPSFAQQFRALWSRQLLRRTVMLWLLWFGIVFAYYGVFTWLPSLLVERGLTVARSFTYVFITTLAQIPGYFSAAYLVDRWGRKPTLVTYLLGSALSAWLLGNAGTAPILVLWGCALSFFNLGAWGVVYTYTPELYPTTLRGFGSGAAASFGRIAGIIAPYLTPWLLTSGGFSQPAVFALFMAVFAVIAADVLLLGEETRGRPLEHVSPTPAQLAR
SIO_010081: TRD_RS11995
subclass of: SO_0000673
so part of: TRD_RS11995
location: 610453..611811
location: region:610453-611811:1
so has part: feature:610453-611811:1:exon

WP_012642410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:610453-611811:1:exon

TRD_RS12000
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12000
old locus tag: trd_A0622
so part of: sequence
location: complement(611884..613008)
location: region:611884-613008:-1
so has part: feature:611884-613008:-1:exon
subclass of: SO_0000010

position:611884:-1
position: 611884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613008:-1
position: 613008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611884-613008:-1:exon

TRD_RS12000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12000
old locus tag: trd_A0622
EC number: 1.3.5.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873639.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO process: GO:0006222 - UMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: quinone-dependent dihydroorotate dehydrogenase
translation: MESGEDRGEVARMGWYRRIVTPLLFRLDPEDAHRLVLGVLSRLSRCPGSERVLRRVFRVPDDERLRVEVGDLTFPNPIGLAAGVDKNAEAVAAWFGLGFGSVEVGTVTPCPQEGNPRPRLWRFPEDETLVNALGFPSDGVAAVRARLVGRWFPGPVGINLGKNAWTPLEQAVVDYCATLVALWDVADYVVVNVSSPNTPGLRELQRGERLEQVLAAVQETNRTLAALQRARPRPLFVKVSLDLDAGALADAIEIAVAVGADGLILGNTSIDPSLRPAGAGALPGGVSGRPLRKRAVELLSNAADRAGGRLALISVGGVLETDDVIQRLRLGADLVQVYTGLVFRGPALPAVLLRGLLRYLDEQGLPSVRALRGR
SIO_010081: TRD_RS12000
subclass of: SO_0000673
so part of: TRD_RS12000
location: complement(611884..613008)
location: region:611884-613008:-1
so has part: feature:611884-613008:-1:exon

WP_012642428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:611884-613008:-1:exon

TRD_RS12005
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12005
old locus tag: trd_A0623
so part of: sequence
location: 613053..613427
location: region:613053-613427:1
so has part: feature:613053-613427:1:exon
subclass of: SO_0000010

position:613053:1
position: 613053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613427:1
position: 613427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613053-613427:1:exon

TRD_RS12005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12005
old locus tag: trd_A0623
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLCYDPADDVLVLDLELPGQLARASAPPIAHARGLLDVTERGSLAGLEISLTDLPPALAELCRALAADDEVTYIEIERVAAARSLRTVTVPIMFRWDGDQGRLSLRIPRRTADYELLYPVGAT
SIO_010081: TRD_RS12005
subclass of: SO_0000673
so part of: TRD_RS12005
location: 613053..613427
location: region:613053-613427:1
so has part: feature:613053-613427:1:exon

WP_012642747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:613053-613427:1:exon

TRD_RS12010
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12010
old locus tag: trd_A0624
so part of: sequence
location: complement(613565..614278)
location: region:613565-614278:-1
so has part: feature:613565-614278:-1:exon
subclass of: SO_0000010

position:613565:-1
position: 613565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614278:-1
position: 614278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613565-614278:-1:exon

TRD_RS12010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12010
old locus tag: trd_A0624
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007415117.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD family hydrolase
translation: MGDDRRMAFLFDLDGTLVDSVYQHVVAWREALEAIGIELSIWRIHRRIGMSGGLFLAGLLRETGRAVTAEEIRRVQQVHAETYGRLLGQVRPLPGARELLDELTRLGIPWAIATSGRLESARKTVAVLGLDADQIPLVTRDHVRHAKPDPDLFLAAAERLGVEIGESVVVGDSVWDMLAARRARALSVGLLSGGYGAGELLEAGAYRVYDDPADLLRHLDEVGVRAADYEWTLAEPS
SIO_010081: TRD_RS12010
subclass of: SO_0000673
so part of: TRD_RS12010
location: complement(613565..614278)
location: region:613565-614278:-1
so has part: feature:613565-614278:-1:exon

WP_012642697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:613565-614278:-1:exon

TRD_RS12015
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12015
old locus tag: trd_A0625
so part of: sequence
location: complement(614283..615743)
location: region:614283-615743:-1
so has part: feature:614283-615743:-1:exon
subclass of: SO_0000010

position:614283:-1
position: 614283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615743:-1
position: 615743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614283-615743:-1:exon

TRD_RS12015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12015
old locus tag: trd_A0625
EC number: 6.5.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015750794.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RtcB family protein
translation: MNRALHVRKIHEYLFEIPPHGKMRVPARLYLDERSLRELMENQSSEEWNALKQLENVACLPGIVKAAMAMADVHPGYGFPIGGVAAFDPKDGGVISVAGVGFDINCGVRCLRTHLTRRDLTGKEEKLADTMFEVIPAGLGSTGELKLSTKEIDRVLREGARYAVRLGYGREDDLEYIEEHGCLSDADPSVVSHTAKQRQMAQVGTLGSGNHYVEVQVVDQIYNARAAEAFGLELGQIVIMLHTGSRALGHQIGTDYLPFLEKATRKYGIEVPDRELVCAPIESPEGQQYFRAVMAGANCAFANRQVLAHLVRQAFWKALRVPDTAIETLYEVAHNTVKWEVHEVNGERRRLLVHRKGSTRAFGPGRPELPERYRAVGQPVLVGGTMGTASYILVGTEQGMRETFGTALHGAGRAKSRRQAKRQYPAERIIEELRKQGIIVRAHGKASISEEAPGAYKDVEHVVEVMCNAGIVARVARLRPIVCLKG
SIO_010081: TRD_RS12015
subclass of: SO_0000673
so part of: TRD_RS12015
location: complement(614283..615743)
location: region:614283-615743:-1
so has part: feature:614283-615743:-1:exon

WP_012642818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:614283-615743:-1:exon

TRD_RS12020
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12020
old locus tag: trd_A0626
so part of: sequence
location: complement(615776..616201)
location: region:615776-616201:-1
so has part: feature:615776-616201:-1:exon
subclass of: SO_0000010

position:615776:-1
position: 615776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616201:-1
position: 616201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615776-616201:-1:exon

TRD_RS12020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12020
old locus tag: trd_A0626
inference: COORDINATES: protein motif:HMM:NF014058.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: archease
translation: MPYEYLDHEADIGLEATGASLEEALRDGVRGLLALLVDPETVEPRQAVPVQATASDPGSLFVALLNAVLAAVDLHGMFFRDFELTHLEQVDDHWVVEGTLWGEPIDLNRHAVEIEVKAATYGGLLAEENEAGWRLRCVLDL
SIO_010081: TRD_RS12020
subclass of: SO_0000673
so part of: TRD_RS12020
location: complement(615776..616201)
location: region:615776-616201:-1
so has part: feature:615776-616201:-1:exon

WP_012642698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615776-616201:-1:exon

TRD_RS12025
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12025
old locus tag: trd_A0627
so part of: sequence
location: 616768..618318
location: region:616768-618318:1
so has part: feature:616768-618318:1:exon
subclass of: SO_0000010

position:616768:1
position: 616768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618318:1
position: 618318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616768-618318:1:exon

TRD_RS12025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12025
old locus tag: trd_A0627
EC number: 2.4.-.-
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: glycosyltransferase family 39 protein
translation: MNLFSRFRPSDPLALVLAFFAAESSIVLNRVVFEALPHTEDEVAFLFQAMTYARGHLLAPAPPLPAAFFIPFVIVRDGMWFGKYPPGYPLVLSLGVLVGYPPLVNALAAAACILLIVAIGRRWYDATTAWLAGLLLLVSPFFLLQAASLMAHTVCLALTLLFTWSFLATVDRPSARAAMPGMVALALLVLARPLTALGVLLPFVLWSTWRFWRVPAWRPPALLFAASGLLATAALLAYNQRTTGDPLVFGYQLWWPFDKVGFGSGISPDGHHTLRDGWFNTRWNLRALERLLYGWPGRLDLVPAVLVTAAAVIQALAHPFRLPPGRPLSRPTTLDLLLAAQAASLILVHMAYWTTGEMYGPRYYAEALGSLALLSARGLLTALRWLETSWLLLAPSRQAPLILRVGAVLILVSLIGWGLIRTGVPFWQSYRQWNHITAEPARTIAERAPHGSLILVPARYWTDYAPFFVRNDPWLQAPVIFALDLGPGYEEACRQAFPGRALYRADLQYASLIPLS
SIO_010081: TRD_RS12025
subclass of: SO_0000673
so part of: TRD_RS12025
location: 616768..618318
location: region:616768-618318:1
so has part: feature:616768-618318:1:exon

WP_012642654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:616768-618318:1:exon

TRD_RS12030
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12030
old locus tag: trd_A0628
so part of: sequence
location: complement(618327..621218)
location: region:618327-621218:-1
so has part: feature:618327-621218:-1:exon
subclass of: SO_0000010

position:618327:-1
position: 618327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621218:-1
position: 621218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618327-621218:-1:exon

TRD_RS12030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12030
old locus tag: trd_A0628
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012120681.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-dependent oxidoreductase
translation: MQAERRAVREPFVPERTSGLASYPPPERWDDWEERGPDERVRRYFLIPTVCFNCEAACGLLAYVDKETLDIRKLEGHPFHPGSRGRNCAKGPATINQVKDPERILYPLRRVGPRGSGKWERVSWDEVLDDIAGRMRRAFLEGRQNEVMYHVGRPGEDGFMERVLWSWGVDGHNSHTNVCSSGGRFGYAVWMGADRPSPDHANARFIFLVSAHLESGHYFNPHAQRIMEAKQRGAKLAVMDPRLSNTAAMADYWLPAAPGTEAFVLLSIANVLIQEEWFDREFVRRWTNWDEYLRVVHPGCPVTFDEFVQRLKEEYARYTPEAAEQLSGIPARTIVELAQELARAAPAVSTHNWRAAAAAHLGGWTVPRALFFLNVLTGSVGTPGGTQPNIWDKHVPRPFAEPPRQKVWNELTWPKEYPLAHHEMSFLLPHFLKEGRGKLAVYFTRVYNPVWTNPDGFTWIEVLQDESLIELHAALTPTWSETAWYADYVLPMGHAPERHDTHSYETHAARWIGFRQPVLRVAREKLGQPVRVTYEANPGEVWEENEFWIELSWRVDPDGSLGIRRWYESPYRPGEKVTVDEYYQWIFEHSIPGLPEAAAAEGLTPLQYMRRYGAFELEKQRYRQYEDPVPEEELAQSWVDPENGRIWTLTPPPHTTNIVPVPGVPPGPRGRWAGVMVDGEPKRGFPTPSGKLEFFSRTLWEWGWPEYAIPCTIESHVGPNQLDRAAGEMVLLPNFRVPTLIHTRSGNAKWLNELTHSNPLWLHPSDAERIGVRTGDLVRVETEIGYFVDRVWVTEAIRPGVAACSHHLGRWRLAEGTGGERWSTALVEIERLSDGRYRLRQRAGVRPFASGDPDSQLVFWGDAGVHQNLTFPVQPDPISGQHCWHQKVRIVKAGPDDRYGDVVVDTRKSMEVYRRWLAMTRPAPGPDGTRRPIWMLRPYKPDPSAYRIDSPTGRGDGPRPSGA
SIO_010081: TRD_RS12030
subclass of: SO_0000673
so part of: TRD_RS12030
location: complement(618327..621218)
location: region:618327-621218:-1
so has part: feature:618327-621218:-1:exon

WP_193345411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:618327-621218:-1:exon

TRD_RS12035
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: nrfD
locus tag: TRD_RS12035
old locus tag: trd_A0629
so part of: sequence
location: complement(621256..622788)
location: region:621256-622788:-1
so has part: feature:621256-622788:-1:exon
subclass of: SO_0000010

position:621256:-1
position: 621256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622788:-1
position: 622788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621256-622788:-1:exon

TRD_RS12035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: nrfD
locus tag: TRD_RS12035
old locus tag: trd_A0629
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012615815.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysulfide reductase NrfD
translation: MARYGFVIDQRKCIGCHACTVACKSENLVPLGVYRTWVKYVEKGTFPHTRRSFTVLRCNHCDDAPCVTICPTKALFRRPDGIVDFDADRCIGCKSCMQACPYDALYIDPITRTAAKCNYCSHRVDQGLLPACVVVCPEKAIIAGDLDDPTSEIHQLVAREPVMVRKPEQGTRPKLFYLGADEASLTPEVQTRTNGYLWAEVRPDDRPAEAVRGTEYLPGPADARVAYDVWHPKPWGWKVASYLWTKSIGSGALALGGPLLASGVMSDRLLGIGAAAIGMVFLAITAVLLIWDLKRPERFWYLLVKPNPRSWLVWGGYILLVVGGLAFFWAVASLAGWQGIERLLAWLALPGGIAAAGYTAFLFGQAEGRDFWQSPLLLPILLVQALVAGTAALLLLLVAGGALEGRAWLGLVLGGGLIGLLVLVASELLVPHANLHVAKAARLLTHGPYRGELLVVGLGVGVLVPLIALALGWASGNLAPWSVVAAVAALIGLWSYERLWVEAGQDIPLS
SIO_010081: TRD_RS12035
subclass of: SO_0000673
so part of: TRD_RS12035
location: complement(621256..622788)
location: region:621256-622788:-1
so has part: feature:621256-622788:-1:exon

WP_012642954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:621256-622788:-1:exon

TRD_RS12040
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12040
old locus tag: trd_A0630
so part of: sequence
location: complement(622800..623078)
location: region:622800-623078:-1
so has part: feature:622800-623078:-1:exon
subclass of: SO_0000010

position:622800:-1
position: 622800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623078:-1
position: 623078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622800-623078:-1:exon

TRD_RS12040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12040
old locus tag: trd_A0630
inference: COORDINATES: protein motif:HMM:NF014624.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-sensitive transcriptional regulator
translation: MTSVAQLDEVTRRELVERLRRIEGQARGIARMIEEGRDCVDIVQQLAAMRAATDSLCAELVQAMLERCFLDGTPPAPQQLARALKAVIRGGR
SIO_010081: TRD_RS12040
subclass of: SO_0000673
so part of: TRD_RS12040
location: complement(622800..623078)
location: region:622800-623078:-1
so has part: feature:622800-623078:-1:exon

WP_012643042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:622800-623078:-1:exon

TRD_RS12045
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12045
old locus tag: trd_A0634
so part of: sequence
location: 623691..625022
location: region:623691-625022:1
so has part: feature:623691-625022:1:exon
subclass of: SO_0000010

position:623691:1
position: 623691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625022:1
position: 625022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623691-625022:1:exon

TRD_RS12045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12045
old locus tag: trd_A0634
inference: COORDINATES: protein motif:HMM:NF024850.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter substrate-binding protein
translation: MQRPARLFTMLLLSLVFVLAACQQAQPTPTPAPAAQPSPTQPAAPAASPTPAAQPTPQAQVTKPTDPIGVLEIKPGEPIVLAWMLTVSGGTAQLGEDSKRGIEIAIDDLGGQLLGHKIELVGEDSGCNPEGGQAAATRLAANPRIVAIVGSSCSSEARVGAPIIDQAGLVMVSPSNTAPDLTDPAKHVNAYLRVAHNDKVQGRVAAEFVVNKLGLKKVATIHDGSLYAEQLANVFAENVKKLGGTVVAQEAVSPDDTDMRPVLTRIATQQPELIYYPIFNPAGSFITIQAKEISGLENVKLMSADGLLEPQTVQNAGQAAVGLYLSGPDLTVLGPKYQEFVQKYQQKYGTKPVAGFHAHAYDATMMIVEAIKKVAVQAPDGTLYIPRKALRDALYETKNFQGLTGNLTCDPNGDCADPKIAVYEVFSTDTANWPDSAIRKIYP
SIO_010081: TRD_RS12045
subclass of: SO_0000673
so part of: TRD_RS12045
location: 623691..625022
location: region:623691-625022:1
so has part: feature:623691-625022:1:exon

WP_012642652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:623691-625022:1:exon

TRD_RS12050
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12050
old locus tag: trd_A0635
so part of: sequence
location: 625106..626176
location: region:625106-626176:1
so has part: feature:625106-626176:1:exon
subclass of: SO_0000010

position:625106:1
position: 625106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626176:1
position: 626176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625106-626176:1:exon

TRD_RS12050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12050
old locus tag: trd_A0635
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020388729.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: branched-chain amino acid ABC transporter permease
translation: MAIATPRSFLSGRRLEASQLIVWTIGAVLLGIVFVGSVLTLRAGHYTAAQWRDFIVFGIAQGSIYALIALGYTMVYGVLRMINFAHGEVFMSGAMTTFFLADYLNRSGFLKAHPWISLIAMLLFSGLVSMTIAVLVERIAYRPLRGAPRLVPLITAVGASFFLQYTFRGLFGSGVRAYPAIPVLQGKLWVFQKTQIAVFVGVAITLLLLLLFLQRTRAGLAIRAVAEDREAAALMGVDVDRAIVTTFAVGGFMAGIAGVLYALVFIQVQFFMGFLPGIKAFTAAVLGGIGNLPGAAVGGLVLGIIESVGPSLFFDGYGIRAAHQLKDVIAFTILVLILIFRPTGILGERLGGEERV
SIO_010081: TRD_RS12050
subclass of: SO_0000673
so part of: TRD_RS12050
location: 625106..626176
location: region:625106-626176:1
so has part: feature:625106-626176:1:exon

WP_012643297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:625106-626176:1:exon

TRD_RS13970
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS13970
old locus tag: trd_A0636
so part of: sequence
location: 626173..627846
location: region:626173-627846:1
so has part: feature:626173-627846:1:exon
subclass of: SO_0000010

position:626173:1
position: 626173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627846:1
position: 627846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626173-627846:1:exon

TRD_RS13970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS13970
old locus tag: trd_A0636
inference: COORDINATES: protein motif:HMM:NF014684.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: leucine/isoleucine/valine transporter permease subunit
translation: MSLATLRRALFIGLLGGIAVWHLSLVGLIPAFAQRRLIGETLTFSYALLVALFALAAHATGRRYPGALQRVAWGTLSALTAGLLVLALAFVVTQVNLRQIFLNATPDLARVLTFGAGVSPAGILRTLLIAAVAGIVSGVVGAAPAPWGRVSVSAALATLLLGLLRDVLGPILPSGLVSFLYGPAGLSVPGAVVIFVLFFLLFALRWSLSGRAGAERLVVFVPSPARGPLARLVVILLLASVPLWAGLFLSNVADFVGFYILMGLGLNLVLGFAGLLDLGYVAFFAVGAYTMAVLTSPEIGQRFTLDFWVALPIAIVLTVCAGLLVGLPVLRMRGDYLAIATLGFGEIVRLLVLSDWLKPYLGGAQGVTRIARPQIGPLRIDSPQEFYVLVLLSCLLAWFLSIRLRDSRLGRAWFAIREDEFVAQAMGINRVTAKLSAFAIGASFGGLSGALFASLVGSVVPASFSLLVSINVVALLVLGGMGSLPGVVVGALALVGIPELLREFQEYRLLVYGIVLIAMMLFRPAGLLPERIHRRELEEAVEEVREVAPAEIAPGRS
SIO_010081: TRD_RS13970
subclass of: SO_0000673
so part of: TRD_RS13970
location: 626173..627846
location: region:626173-627846:1
so has part: feature:626173-627846:1:exon

WP_012643175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:626173-627846:1:exon

TRD_RS12060
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12060
old locus tag: trd_A0637
so part of: sequence
location: 627859..628686
location: region:627859-628686:1
so has part: feature:627859-628686:1:exon
subclass of: SO_0000010

position:627859:1
position: 627859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628686:1
position: 628686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627859-628686:1:exon

TRD_RS12060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12060
old locus tag: trd_A0637
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003044483.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MALLETRHLTKRFGGLVALRDVDLAVTERSIHSVIGPNGAGKTTLFNCITGFLRPDAGDILFAGSSIARLRPDLVAQLGIARTYQNIRLFKHLSVLDNVLIGLHPHVRYSLIDAVVRTPRYWQAERAAEREARDLLAYVGLAGKEFLTAANLPYGDQRRLEIARALALRPQLLLLDEPTAGMNPQETDEMIQLIRRLRDERGLTILLIEHDMKVVMNISDLVTVLDFGEKIAEGPPDAVRRDPRVIEAYLGRGAASGLGTSMPMQDGEAQPHATA
SIO_010081: TRD_RS12060
subclass of: SO_0000673
so part of: TRD_RS12060
location: 627859..628686
location: region:627859-628686:1
so has part: feature:627859-628686:1:exon

WP_012643186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:627859-628686:1:exon

TRD_RS12065
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12065
old locus tag: trd_A0638
so part of: sequence
location: 628673..629386
location: region:628673-629386:1
so has part: feature:628673-629386:1:exon
subclass of: SO_0000010

position:628673:1
position: 628673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629386:1
position: 629386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628673-629386:1:exon

TRD_RS12065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12065
old locus tag: trd_A0638
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013130669.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MPLLELQRVHVHYGPIQALKGISLTVESGEIVTLLGANGAGKTSTLRAISGLVRPSAGRILLQDVDLTHRKPHEIVALGVGHVPEGRRIFPRLSVEENLRLGAFTVRDRAEIARRQEYVFSLFPRLAERRHQAGGTLSGGEQQMLAIGRALMMQPRILLLDEPSMGLAPVLVESIFEVIQRLNRDGTTILLVEQNARMALEVAHRGYVLETGRIVLSGPAAELAADPRVQAAYLGAA
SIO_010081: TRD_RS12065
subclass of: SO_0000673
so part of: TRD_RS12065
location: 628673..629386
location: region:628673-629386:1
so has part: feature:628673-629386:1:exon

WP_012643207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:628673-629386:1:exon

TRD_RS12070
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12070
old locus tag: trd_A0639
so part of: sequence
location: complement(629390..630322)
location: region:629390-630322:-1
so has part: feature:629390-630322:-1:exon
subclass of: SO_0000010

position:629390:-1
position: 629390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630322:-1
position: 630322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629390-630322:-1:exon

TRD_RS12070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12070
old locus tag: trd_A0639
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012873769.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent oxidoreductase
translation: MDDKPTLGLVGLGNLGRAIALRLLGAGYRLLVNDRRWEVAQALELHGATAIPTPLLLAEEVDMFLTCLPGDEELFEVYIGPEGALEHLRPGATVIDFSTASPMMMQRIDREARLRQIDVVDAPVGGGPVEANSGQLTMMVGAEPAVFERMMPLLGVLGRETYLVGPPGMGKVVKLINQLLAGVSLVVIGEALALAANAGADLATVYEALRSSTGGWKLWRDVVPELLRESGEVSFRLELMKRDMELAMRLGSDVGSPVPMTALAHQFYVAAMARGWGQLPAHEVARLVGRLANASFSASSARGDDLLAAE
SIO_010081: TRD_RS12070
subclass of: SO_0000673
so part of: TRD_RS12070
location: complement(629390..630322)
location: region:629390-630322:-1
so has part: feature:629390-630322:-1:exon

WP_012642859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:629390-630322:-1:exon

TRD_RS12075
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12075
old locus tag: trd_A0640
so part of: sequence
location: complement(630857..631519)
location: region:630857-631519:-1
so has part: feature:630857-631519:-1:exon
subclass of: SO_0000010

position:630857:-1
position: 630857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631519:-1
position: 631519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630857-631519:-1:exon

TRD_RS12075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12075
old locus tag: trd_A0640
inference: COORDINATES: protein motif:HMM:NF016119.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class F sortase
translation: MRSAGLLLLLAAAAWILGAGIGLLAGTSLRDDPRPTPTVRPRVVAVTPTATPTTQANPVTDGSAVSPPSEPILITRIRIPAIGVDAPVVVKGLGSERRMEAPDHPDEVAWYDFTALPGQGSNVVLAGHVDFAGVGPAVFWDLWRVRVGDLVELGLADGRVSRYRVTGLETVEERQAPVERIVGPTSQERLTLITCAGNYNPATGRYDQRLIVTATPLANP
SIO_010081: TRD_RS12075
subclass of: SO_0000673
so part of: TRD_RS12075
location: complement(630857..631519)
location: region:630857-631519:-1
so has part: feature:630857-631519:-1:exon

WP_012642921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:630857-631519:-1:exon

TRD_RS12080
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12080
old locus tag: trd_A0641
so part of: sequence
location: complement(631523..634222)
location: region:631523-634222:-1
so has part: feature:631523-634222:-1:exon
subclass of: SO_0000010

position:631523:-1
position: 631523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634222:-1
position: 634222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631523-634222:-1:exon

TRD_RS12080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12080
old locus tag: trd_A0641
inference: COORDINATES: protein motif:HMM:NF041518.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: choice-of-anchor Q domain-containing protein
translation: MRWTGGVVALLVGSLALAAAGGALVFVPATGAAEVTITVAGTSDGTGSCSGSGTTRTCPTLRAAVILANALNDPVTIQLQDGRYELSIPPATDDTAESGDLDVTKRGGALRIVGRNATTIAGAWPDENQADRLFDVGAGATMILEKLTLSGGRAVHDDARDHKGGAIWVGGALQLADVTFQENVAAGDGGAVYVAPSGTLSVLLDRRVAFARNRAGDPMNDDEEANGGALAVAGAAVLDGVAVLHGNEASGAGGAVWVSGGRLVLGSRVTLGGGAASDANRARDGGALAVDGGQVELQGTLVRGNRAGNGTPADESGRGGGIWVARGQVTLRQVKVLANRAVRGGGIASDEGILTLLDSEVRENQAELSGGGIALLGKGTAQIVGGTIGTNTAVEGDGGGVLNAGTLALSRTVVEGNRAEAGAGGGISSSGTLDLSSPETVIVRDNRARLGGGLASTGTSRLRSLVVQSNVATQDGGGIWNQGDMVLDAATIEANRSEAAGGGIYHAGSKTLTLQGNTIVRGNQATLDGGGIAALGKASLNGATVVGNVAGGSGGGLAARGQVDLQRVQVIDNQATNDGGGLVVEGTAKVTMADTAIRRSSAGQLGGGVAVRSGGQLTITASSVTENQSAAYGGGIAVLGAVGLANVTVSTNVSQQRGGGLWVGPQGTASLQFVTLAANAAAAGGALYNDGGGVTLRGTLLAASPGGGNCGGLAPSSQGGNLEDRDSCGLQGTGDLVDGDPSLQPLQVDSSGGTLYHALGLGSAAIDAAGTQGCPSEDQVHTKRPQGSACDIGAWELPVLEATPLPTASPTGTPVGTPGAGLRPTTTPTARPVLGPATPITGPGPTPTPTIGLPATGSASASPVARTVGVGLLALGVAGMMAGGVGMMRGRRSNGARER
SIO_010081: TRD_RS12080
subclass of: SO_0000673
so part of: TRD_RS12080
location: complement(631523..634222)
location: region:631523-634222:-1
so has part: feature:631523-634222:-1:exon

WP_012642528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:631523-634222:-1:exon

TRD_RS12085
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12085
old locus tag: trd_A0642
so part of: sequence
location: complement(634308..635579)
location: region:634308-635579:-1
so has part: feature:634308-635579:-1:exon
subclass of: SO_0000010

position:634308:-1
position: 634308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635579:-1
position: 635579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634308-635579:-1:exon

TRD_RS12085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12085
old locus tag: trd_A0642
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017890061.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook protein FlgE
translation: MMRSMFSAISGLRAHQTWMDVIGNNIANVNTTGFKVGRVRFTDILSQLVRGASGPTETRGGINPLQIGLGAVVGAVDTIHTQGALQLTGKPSDLAIQGDGFFVVSDGSQTLYTRDGAFDIGSDLRLVNPSNGFYVLGWQADANGNVDTAGPVGPITIPIGQQLDAVPTTQITVQGNLNANQDPAATPHFVTKVSITDSLGKRHEFYILFDKVGTNTWNYTLQEDDPRTTSTTEDDPDFALGGTPSGTLVFDADGNLDLAASNISAVDLDSTAGGASSITVTPDFSRLTQLAAPYSANAAANGAPAGSLTTFTVSQSGQVLGIYSNGVTKVVGQIALALFTNPGGLMKVGGNAYLPTVNSGEPIVGPADSGGRGKIASGYLEMSNVDLAQEFTSMIMAQRGFQANSRVITTSDEVLQELVNLRR
SIO_010081: TRD_RS12085
subclass of: SO_0000673
so part of: TRD_RS12085
location: complement(634308..635579)
location: region:634308-635579:-1
so has part: feature:634308-635579:-1:exon

WP_012642399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:634308-635579:-1:exon

TRD_RS12090
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12090
old locus tag: trd_A0643
so part of: sequence
location: complement(635672..636127)
location: region:635672-636127:-1
so has part: feature:635672-636127:-1:exon
subclass of: SO_0000010

position:635672:-1
position: 635672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636127:-1
position: 636127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635672-636127:-1:exon

TRD_RS12090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12090
old locus tag: trd_A0643
inference: COORDINATES: protein motif:HMM:NF015896.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook capping FlgD N-terminal domain-containing protein
translation: MSVGSVSDSNGPVTTNPLSSGGGVGPGGQLDKQAFLMLLVAQLKNQDPMNPMQDREFIAQLAQLNTLEQLQQLNETVAAMAQHAALGQVAGYLGRVVSGLDRTSGDLVTGTVVRATILDGAAVLELSGGQRIDVRDVVSIGLAGAGSGSGE
SIO_010081: TRD_RS12090
subclass of: SO_0000673
so part of: TRD_RS12090
location: complement(635672..636127)
location: region:635672-636127:-1
so has part: feature:635672-636127:-1:exon

WP_052294139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:635672-636127:-1:exon

TRD_RS12095
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12095
old locus tag: trd_A0644
so part of: sequence
location: complement(636144..637547)
location: region:636144-637547:-1
so has part: feature:636144-637547:-1:exon
subclass of: SO_0000010

position:636144:-1
position: 636144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637547:-1
position: 637547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636144-637547:-1:exon

TRD_RS12095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12095
old locus tag: trd_A0644
inference: COORDINATES: protein motif:HMM:NF014207.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook-length control protein FliK
translation: MVLPVVSTPNGVHERAGPRPGDLGSDAQAFLAILATLLGLVPTGEEGPGNGLMPADASAAEGRTRELTHRLEESVMPDSMLFGVAQAGLVLAGVASTDGQMKGQSHGERRSDTPRLGTVFAAGMVPSELGVLTGLAGTLSVDDGQASAVIGEPAIAQQSASLLEYAQSSGQAALGEPASGAVQAGDEGQPKGWQGPTVGALLQHTAAGAGGPVALDEAGRAAAHRIAHRVEPVGGSEGVGVTPERGSEAVQRVPAGVRVWVEEQASDGRGQALTVATERRVRHDDRPALAGALPVSDTPGSRLGEAGPVPAAGEEAAAGAIGQVQERVAQAIAHGTRQLRVRLEPPDLGVVDVRIREIAGRLEVTLAANQPEVRQALEAGRESLRASLAAGGFAVQRVEVQPLTMASGQNGISGSQSGMGWPGGQQGASSDPGWARPERTALDQLPVVGDSRGRVRQESSGLVDTWA
SIO_010081: TRD_RS12095
subclass of: SO_0000673
so part of: TRD_RS12095
location: complement(636144..637547)
location: region:636144-637547:-1
so has part: feature:636144-637547:-1:exon

WP_012643192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636144-637547:-1:exon

TRD_RS12100
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: flgB
locus tag: TRD_RS12100
old locus tag: trd_A0645
so part of: sequence
location: complement(637573..637989)
location: region:637573-637989:-1
so has part: feature:637573-637989:-1:exon
subclass of: SO_0000010

position:637573:-1
position: 637573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637989:-1
position: 637989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637573-637989:-1:exon

TRD_RS12100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: flgB
locus tag: TRD_RS12100
old locus tag: trd_A0645
inference: COORDINATES: protein motif:HMM:TIGR01396.1
GO component: GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar basal body rod protein FlgB
translation: MAGTIDPIGVLARTLDALALRQQVTASNVANAETPGFRGQAVRFEDLLQAMLNGTFARLPLVRTDSRHIAVTASSPSALQPEVVELTGTRYRPDGNNVDIEREMGLLAETTLRYSAVSEVLARRLAMLRAMASGGQGS
SIO_010081: TRD_RS12100
subclass of: SO_0000673
so part of: TRD_RS12100
location: complement(637573..637989)
location: region:637573-637989:-1
so has part: feature:637573-637989:-1:exon

WP_012642929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:637573-637989:-1:exon

TRD_RS12105
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12105
old locus tag: trd_A0646
so part of: sequence
location: complement(638000..638983)
location: region:638000-638983:-1
so has part: feature:638000-638983:-1:exon
subclass of: SO_0000010

position:638000:-1
position: 638000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638983:-1
position: 638983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638000-638983:-1:exon

TRD_RS12105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12105
old locus tag: trd_A0646
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012871030.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidoglycan DD-metalloendopeptidase family protein
translation: MAGLTIPPEIIASMPVRFGIRSPQLGGSTGASSQFWALLAQRGVVPAAPPANSDPLAMLRGAWPVSGTVTSTYGPRSLLPGETFHSGIDIAVPEGTPVCATGDGTVRFVGNTDGYGLRIEVDHGNGVTTLYGHLSAADVRPGQRVQRGQVIGKSGNTGLSTGPHLHYEIRQNGRAVDPGPLLRAAPKGSAQGIERISALPYGRAILQAAQRYGLDPALLAAMVKVESGFDPRAVSPAGAKGLLQLMDTTAAALGVRDPFDPTQNLDGGARYFSQLLQRFGGDVSLALAAYNAGPGAVEQAGGVPPYPETHRYVSAVLATWRALGGTG
SIO_010081: TRD_RS12105
subclass of: SO_0000673
so part of: TRD_RS12105
location: complement(638000..638983)
location: region:638000-638983:-1
so has part: feature:638000-638983:-1:exon

WP_012642874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:638000-638983:-1:exon

TRD_RS12110
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: fliJ
locus tag: TRD_RS12110
old locus tag: trd_A0647
so part of: sequence
location: complement(639003..639470)
location: region:639003-639470:-1
so has part: feature:639003-639470:-1:exon
subclass of: SO_0000010

position:639003:-1
position: 639003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639470:-1
position: 639470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639003-639470:-1:exon

TRD_RS12110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
gene: fliJ
locus tag: TRD_RS12110
old locus tag: trd_A0647
inference: COORDINATES: protein motif:HMM:TIGR02473.1
GO component: GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO function: GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar export protein FliJ
translation: MVRLLRQRAKRMERLLEHRQSLVEEAQRQLAEQQRWVATCEAVLAQLAASQRSLAAGLAQLANRSVDAEVLAGAETYESWLEQRRAEEAARLEQAKRRAELARAALIAQRREAKKLELVRARWLSEAQRREQAAETALLDELATVRAARRLLTDQ
SIO_010081: TRD_RS12110
subclass of: SO_0000673
so part of: TRD_RS12110
location: complement(639003..639470)
location: region:639003-639470:-1
so has part: feature:639003-639470:-1:exon

WP_012642509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639003-639470:-1:exon

TRD_RS12115
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12115
old locus tag: trd_A0648
so part of: sequence
location: complement(639485..640837)
location: region:639485-640837:-1
so has part: feature:639485-640837:-1:exon
subclass of: SO_0000010

position:639485:-1
position: 639485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640837:-1
position: 640837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639485-640837:-1:exon

TRD_RS12115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12115
old locus tag: trd_A0648
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009531399.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FliI/YscN family ATPase
translation: MTLETVLDRFRDRLRDLQPIQREGRVVRGIGLTVEAIGLDLQIGDLCHIFPSLSEEGRLAAEVVGFHDERLILVPLAELRGVRHGSRVVRAPEALHVPVGPELLGRVIDGLGRPIDGKGPLRCRRRLRIGGAPPSPLQRAPIRDILPTGVRTIDALLTCGRGQRLGIFAGSGVGKSTLLGMISRNAVCDVRVIALIGERGREVQEFIERDLGPAGLEQAVVVVSTSDQPALMRIKAAWTATLIAEYFRDRGMSVVLMMDSVTRLAMAQREVGLAAGEPPATRGYPPSVFALLPRLLERAGNAEQGSITAFYTVLVEGDDLNEPISDTVRGILDGHIVLARTLADRGHYPAIDVLASVSRLMPSLVTPDHRALASEVRELLAAYESARDLIDIGAYVHGTNPTVDRALSLMPEIRRFLQQKPEERATFAETVAWLERLLRGERVARATSAG
SIO_010081: TRD_RS12115
subclass of: SO_0000673
so part of: TRD_RS12115
location: complement(639485..640837)
location: region:639485-640837:-1
so has part: feature:639485-640837:-1:exon

WP_012643018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639485-640837:-1:exon

TRD_RS12120
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
locus tag: TRD_RS12120
old locus tag: trd_A0649
so part of: sequence
location: complement(640827..641522)
location: region:640827-641522:-1
so has part: feature:640827-641522:-1:exon
subclass of: SO_0000010

position:640827:-1
position: 640827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641522:-1
position: 641522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640827-641522:-1:exon

TRD_RS12120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 309801
locus tag: TRD_RS12120
old locus tag: trd_A0649
inference: COORDINATES: protein motif:HMM:NF014196.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FliH/SctL family protein
translation: MASARVVKRREASTAGDTLVVPQPSPHDRELAVRLLAEAEARAAAIVAAAEEEARAIRAAVEAELESLQQQLWEAALVEARRQVEAELAAEQRELLARFRALVERAVLREEEIRQAMARLLVELSVLVAETVLRREVERDGELLGRLAQAALEHAPSAPVTHLIVHPEDVERARDWLARAWNGRPPVEVVGDQHVDRGSCVLGTPVGFVDARISTQLEAVRRALSEVADDA
SIO_010081: TRD_RS12120
subclass of: SO_0000673
so part of: TRD_RS12120
location: complement(640827..641522)
location: region:640827-641522:-1
so has part: feature:640827-641522:-1:exon

WP_012642662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:640827-641522:-1:exon

TRD_RS12125
type: Gene
subclass of: SO_0000704
RO_0002162: 309801
gene: fliG
locus tag: TRD_RS12125
old locus tag: trd_A0650
so part of: sequence
location: complement(641515..642549)
location: region:641515-642549:-1
so has part: feature:641515-642549:-1:exon
subclass of: SO_0000010

position:641515:-1
position: 641515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642549:-1
position: 642549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641515-642549:-1:exon