Haloferax volcanii DS2 plasmid pHV3, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.
The complete genome sequence of Haloferax volcanii DS2, a model archaeon
Submitted (04-JUN-2021) Computational Biology Group, Max-Planck Institute of Biochemistry, Am Klopferspitz 18, Martinsreid D-82152, Germany
Submitted (14-MAY-2020) Computational Biology Group, Max-Planck Institute of Biochemistry, Am Klopferspitz 18, Martinsreid D-82152, Germany
Submitted (15-SEP-2016) Computational Biology Group, Max-Planck Institute of Biochemistry, Am Klopferspitz 18, Martinsreid D-82152, Germany
Submitted (04-FEB-2010) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP001953.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/12/2023 12:20:58\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,067\nCDSs (total) :: 4,006\nGenes (coding) :: 3,921\nCDSs (with protein) :: 3,921\nGenes (RNA) :: 61\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 53\nncRNAs :: 2\nPseudo Genes (total) :: 85\nCDSs (without protein) :: 85\nPseudo Genes (ambiguous residues) :: 0 of 85\nPseudo Genes (frameshifted) :: 42 of 85\nPseudo Genes (incomplete) :: 44 of 85\nPseudo Genes (internal stop) :: 21 of 85\nPseudo Genes (multiple problems) :: 18 of 85\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_007274162.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_004061820.1
COORDINATES: similar to AA sequence:RefSeq:WP_004972263.1
COORDINATES: similar to AA sequence:RefSeq:WP_008608059.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041148.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008573028.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041146.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008097080.1
COORDINATES: similar to AA sequence:RefSeq:WP_008573032.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004968453.1
GO:0050131 - N-methyl-L-amino-acid oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004061810.1
COORDINATES: similar to AA sequence:RefSeq:WP_004972242.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968456.1
COORDINATES: similar to AA sequence:RefSeq:WP_006186825.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968458.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004041137.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274175.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097067.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004041134.1
COORDINATES: similar to AA sequence:RefSeq:WP_008573052.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007274178.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041131.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968466.1
COORDINATES: similar to AA sequence:RefSeq:WP_008608136.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008097058.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_006600031.1
GO:0003824 - catalytic activity [Evidence IEA]
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004041126.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041125.1
GO:0047837 - D-xylose 1-dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004041124.1
GO:0050021 - L-arabinonolactonase activity [Evidence IEA]; GO:0050402 - xylono-1,4-lactonase activity [Evidence IEA]
GO:0019568 - arabinose catabolic process [Evidence IEA]; GO:0042732 - D-xylose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004061776.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041122.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061774.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041120.1
GO:0008643 - carbohydrate transport [Evidence IEA]
xylose/arabinose ABC transporter permease XacH
COORDINATES: similar to AA sequence:RefSeq:WP_004041119.1
xylose/arabinose ABC transporter permease XacI
COORDINATES: similar to AA sequence:RefSeq:WP_004041118.1
GO:0015612 - ABC-type L-arabinose transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
xylose/arabinose ABC transporter ATP-binding protein XacJ
COORDINATES: similar to AA sequence:RefSeq:WP_004041117.1
xylose/arabinose ABC transporter ATP-binding protein XacK
COORDINATES: similar to AA sequence:RefSeq:WP_004041116.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041115.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041114.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004061761.1
IucA/IucC family siderophore biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_004061759.1
lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008573088.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041110.1
GO:0019290 - siderophore biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008573092.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004972156.1
diaminobutyrate--2-oxoglutarate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_006600021.1
COORDINATES: similar to AA sequence:RefSeq:WP_008573098.1
cobalt-precorrin-7 (C(5))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008605880.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600019.1
GO:0051116 - cobaltochelatase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013034971.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600018.1
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_004572756.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097012.1
GO:0016829 - lyase activity [Evidence IEA]
CbiX/SirB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008606663.1
COORDINATES: similar to AA sequence:RefSeq:WP_004572753.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041097.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006600014.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004572751.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041094.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008573123.1
cobalt-factor II C(20)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006600011.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT
COORDINATES: similar to AA sequence:RefSeq:WP_004972120.1
COORDINATES: similar to AA sequence:RefSeq:WP_008606671.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041089.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008096998.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008573132.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274220.1
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_004061734.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061732.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004041083.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041082.1
COORDINATES: similar to AA sequence:RefSeq:WP_008096994.1
COORDINATES: similar to AA sequence:RefSeq:WP_008573139.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041079.1
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006600003.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041077.1
COORDINATES: similar to AA sequence:RefSeq:WP_008609280.1
COORDINATES: similar to AA sequence:RefSeq:WP_008096975.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968525.1
COORDINATES: similar to AA sequence:RefSeq:WP_004972087.1
COORDINATES: similar to AA sequence:RefSeq:WP_006599999.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004041071.1
COORDINATES: similar to AA sequence:RefSeq:WP_006599998.1
GO:0004650 - polygalacturonase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008388572.1
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004041068.1
COORDINATES: similar to AA sequence:RefSeq:WP_008573157.1
COORDINATES: similar to AA sequence:RefSeq:WP_006599995.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041065.1
COORDINATES: similar to AA sequence:RefSeq:WP_006599994.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388598.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968542.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968543.1
COORDINATES: similar to AA sequence:RefSeq:WP_008573174.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041059.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097146.1
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004968549.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274246.1
COORDINATES: similar to AA sequence:RefSeq:WP_008006250.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008573184.1
COORDINATES: similar to AA sequence:RefSeq:WP_008573186.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274249.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061665.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041050.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968558.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968559.1
COORDINATES: similar to AA sequence:RefSeq:WP_006599985.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968561.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004041045.1
part of the rhamnose catabolism pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
2-keto-3-deoxy-L-rhamnonate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_004041044.1
COORDINATES: similar to AA sequence:RefSeq:WP_008609137.1
GO:0070967 - coenzyme F420 binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
TIGR03560 family F420-dependent LLM class oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_006599981.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041041.1
2,4-diketo-3-deoxy-L-rhamnonate hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_013034945.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041039.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041038.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061638.1
COORDINATES: similar to AA sequence:RefSeq:WP_008096932.1
peptidase dimerization domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007274263.1
COORDINATES: similar to AA sequence:RefSeq:WP_008608336.1
COORDINATES: similar to AA sequence:RefSeq:WP_008096928.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274265.1
COORDINATES: similar to AA sequence:RefSeq:WP_008096924.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041030.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971997.1
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_007274269.1
COORDINATES: similar to AA sequence:RefSeq:WP_008573223.1
COORDINATES: similar to AA sequence:RefSeq:WP_008610322.1
COORDINATES: similar to AA sequence:RefSeq:WP_008573229.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968585.1
COORDINATES: similar to AA sequence:RefSeq:WP_006599969.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274275.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041020.1
COORDINATES: similar to AA sequence:RefSeq:WP_014864090.1
COORDINATES: similar to AA sequence:RefSeq:WP_006599966.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061605.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061603.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061601.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041014.1
COORDINATES: similar to AA sequence:RefSeq:WP_008573253.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595009.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041011.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041010.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:NF027245.2
COORDINATES: similar to AA sequence:RefSeq:WP_004041008.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0050151 - oleate hydratase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008573257.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041006.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016151 - nickel cation binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0010045 - response to nickel cation [Evidence IEA]
nickel-responsive transcriptional regulator NikR
COORDINATES: similar to AA sequence:RefSeq:WP_013035684.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008368186.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007189946.1
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008368193.1
poly-gamma-glutamate biosynthesis protein PgsC/CapC
COORDINATES: similar to AA sequence:RefSeq:WP_004977673.1
COORDINATES: similar to AA sequence:RefSeq:WP_008606609.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041381.1
ISNCY-like element ISHvo14 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_006630790.1
COORDINATES: similar to AA sequence:RefSeq:WP_012289547.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385250.1
COORDINATES: similar to AA sequence:RefSeq:WP_008605320.1
COORDINATES: similar to AA sequence:RefSeq:WP_004056324.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572694.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041373.1
cytochrome bc complex cytochrome b subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004967657.1
COORDINATES: similar to AA sequence:RefSeq:WP_004056332.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600144.1
respiratory nitrate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_004062051.1
GO:0020037 - heme binding [Evidence IEA]
ethylbenzene dehydrogenase-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_008572702.1
COORDINATES: similar to AA sequence:RefSeq:WP_004062047.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572706.1
COORDINATES: similar to AA sequence:RefSeq:WP_004062045.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600137.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572711.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006600135.1
COORDINATES: similar to AA sequence:RefSeq:WP_004062021.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600134.1
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_008096793.1
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_004062018.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971850.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971846.1
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004041355.1
GO:0050532 - 2-phosphosulfolactate phosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006600131.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572731.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041352.1
GO:0047689 - aspartate racemase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006108543.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055867.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041349.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041348.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041347.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971835.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041345.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971827.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041342.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041341.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041340.1
outer membrane lipoprotein carrier protein LolA
COORDINATES: similar to AA sequence:RefSeq:WP_008572750.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041337.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041336.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968659.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041334.1
GO:0004474 - malate synthase activity [Evidence IEA]
GO:0006097 - glyoxylate cycle [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008572761.1
COORDINATES: similar to AA sequence:RefSeq:WP_008096755.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013034992.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004971785.1
COORDINATES: similar to AA sequence:RefSeq:WP_008578718.1
COORDINATES: similar to AA sequence:RefSeq:WP_008096750.1
PGF-CTERM sorting domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004041327.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572776.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600116.1
COORDINATES: similar to AA sequence:RefSeq:WP_008096746.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008572781.1
COORDINATES: similar to AA sequence:RefSeq:WP_007689974.1
GO:0004512 - inositol-3-phosphate synthase activity [Evidence IEA]
GO:0006021 - inositol biosynthetic process [Evidence IEA]; GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004041321.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600112.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572788.1
Tm-1-like ATP-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006600110.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572790.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_004041316.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041315.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600107.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600106.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041312.1
phosphoenolpyruvate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004971736.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600105.1
COORDINATES: similar to AA sequence:RefSeq:WP_008578916.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_004041308.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097310.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971711.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572808.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097305.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572811.1
GO:0046556 - alpha-L-arabinofuranosidase activity [Evidence IEA]
GO:0046373 - L-arabinose metabolic process [Evidence IEA]
alpha-L-arabinofuranosidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013035611.1
COORDINATES: similar to AA sequence:RefSeq:WP_008605919.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061976.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004041299.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004041298.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061970.1
GO:0019239 - deaminase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004968636.1
glutathione-independent formaldehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_004041295.1
COORDINATES: similar to AA sequence:RefSeq:WP_006166239.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004041293.1
IS200/IS605-like element ISHvo18 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_004061965.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968639.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016625 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor [Evidence IEA]
aldehyde ferredoxin oxidoreductase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008578724.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
selenium cofactor biosynthesis protein YqeC
COORDINATES: similar to AA sequence:RefSeq:WP_013034985.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061954.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611983.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875971.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041284.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572835.1
IclR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008605911.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971673.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097267.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041279.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097263.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061929.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_004971663.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600089.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008097259.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968332.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041272.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006600085.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971649.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971647.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041268.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF016831.2
COORDINATES: protein motif:HMM:NF024586.2
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_004041265.1
histidine kinase N-terminal 7TM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004971632.1
COORDINATES: similar to AA sequence:RefSeq:WP_008610687.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061899.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097237.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041260.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572866.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600072.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572869.1
COORDINATES: similar to AA sequence:RefSeq:WP_008611416.1
stress response translation initiation inhibitor YciH
COORDINATES: similar to AA sequence:RefSeq:WP_007274117.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041253.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041252.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572873.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041250.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008610349.1
GO:0046855 - inositol phosphate dephosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004041248.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572875.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061879.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041245.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572878.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041243.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572880.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041241.1
GO:0019628 - urate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008572882.1
GO:0004846 - urate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004041239.1
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_008572884.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008605990.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572888.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041234.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041233.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041232.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041231.1
COORDINATES: protein motif:HMM:NF024869.2
COORDINATES: similar to AA sequence:RefSeq:WP_004041229.1
COORDINATES: similar to AA sequence:RefSeq:WP_004517321.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041227.1
COORDINATES: similar to AA sequence:RefSeq:WP_013034986.1
COORDINATES: similar to AA sequence:RefSeq:WP_008578932.1
GO:0000034 - adenine deaminase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004041224.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008605613.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041222.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041221.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097188.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572927.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572929.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572932.1
COORDINATES: similar to AA sequence:RefSeq:WP_008606553.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388672.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572938.1
COORDINATES: similar to AA sequence:RefSeq:WP_008606557.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041212.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971549.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572946.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572947.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572949.1
COORDINATES: similar to AA sequence:RefSeq:WP_008606567.1
COORDINATES: protein motif:HMM:NF016203.2
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008097161.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041203.1
COORDINATES: similar to AA sequence:RefSeq:WP_008607002.1
carbohydrate-binding family 9-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_004041201.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041200.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041199.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041198.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968400.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041196.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004968403.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097147.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041192.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600063.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041190.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041189.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968413.1
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004041187.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041184.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572982.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041180.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971491.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968422.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041175.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600056.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041173.1
4Fe-4S ferredoxin N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007274141.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041170.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004041169.1
COORDINATES: similar to AA sequence:RefSeq:WP_004061839.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572992.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600053.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600052.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097121.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274152.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041162.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971465.1
COORDINATES: similar to AA sequence:RefSeq:WP_008573002.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274155.1
COORDINATES: similar to AA sequence:RefSeq:WP_004972276.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600046.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007274158.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041155.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097104.1
GO:0050334 - thiaminase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006600043.1