Microcebus murinus isolate mixed chromosome 32, Mmur_3.0, whole genome shotgun sequence.
type: Entry
definition: Microcebus murinus isolate mixed chromosome 32, Mmur_3.0, whole genome shotgun sequence.
sequence version: NC_033691.1
sequence date: 2017-02-27
sequence: sequence
division: CON
label: NC_033691.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA285159
dblink: SAMN06275470
keyword: WGS
keyword: RefSeq
source: Microcebus murinus (gray mouse lemur)
organism: Microcebus murinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM007692.1.\nAssembly name: Mmur_3.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2017/02/06. The original whole-genome shotgun project has the\naccession ABDC00000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Date :: MAY-2015\nAssembly Method :: AllPathsLG v. 41070; Atlas Link v. 1.0;\n Atlas GapFill v. 2.0; PBJelly2 v. 14.9.9;\n Lachesis v. shendurelab-LACHESIS-2151de9;\n BioNano IrysSolve v. 2.1\nPolishing Method :: Pilon v 1.18\nAssembly Name :: Mmur_3.0\nGenome Coverage :: 221.6x\nSequencing Technology :: Illumina; PacBio RS; PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Microcebus murinus Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 9149476
topology: linear
so has quality: SO_0000987
location: 1..9149476
location: region:1-9149476:1
RO_0002162: 30608

NC_033691
type: RefSeq
SIO_000068: refseq

PRJNA285159
type: BioProject
SIO_000068: bioproject

SAMN06275470
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9149476:1
position: 9149476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-9149476:1:source
so part of: sequence
organism: Microcebus murinus
mol type: genomic DNA
isolate: mixed
chromosome: 32
sex: pooled male and female
tissue type: liver; kidney
note: three separate animals were used in this assembly: #8(Reference animal), 1886F (Citronella), 7006M (Rosehip)

30608
type: Taxonomy
SIO_000068: taxonomy

LOC105883839
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105883839
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(201353..205316)
location: region:201353-205316:-1
so has part: feature:201353-205316:-1:exon
subclass of: SO_0000011

105883839
type: Gene
SIO_000068: ncbigene

position:201353:-1
position: 201353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205316:-1
position: 205316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201353-205316:-1:exon

LOC105883839
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105883839
product: uncharacterized LOC105883839
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001159944.2
SIO_010081: LOC105883839
subclass of: SO_0000673
so part of: LOC105883839
location: complement(join(201353..202031,202230..202433,203399..205316))
location: region:201353-205316:-1
so has part: feature:203399-205316:-1:exon
so has part: feature:202230-202433:-1:exon
so has part: feature:201353-202031:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203399-205316:-1:exon

position:203399:-1
position: 203399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:202230-202433:-1:exon

position:202230:-1
position: 202230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202433:-1
position: 202433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:201353-202031:-1:exon

position:202031:-1
position: 202031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105883840
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105883840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(207963..231340)
location: region:207963-231340:-1
so has part: feature:207963-231340:-1:exon
subclass of: SO_0000011

105883840
type: Gene
SIO_000068: ncbigene

position:207963:-1
position: 207963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231340:-1
position: 231340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207963-231340:-1:exon

LOC105883840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105883840
product: uncharacterized LOC105883840
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001159945.1
SIO_010081: LOC105883840
subclass of: SO_0000673
so part of: LOC105883840
location: complement(join(207963..209145,217368..217450,217717..217930,231220..231340))
location: region:207963-231340:-1
so has part: feature:231220-231340:-1:exon
so has part: feature:217717-217930:-1:exon
so has part: feature:217368-217450:-1:exon
so has part: feature:207963-209145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231220-231340:-1:exon

position:231220:-1
position: 231220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:217717-217930:-1:exon

position:217717:-1
position: 217717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217930:-1
position: 217930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:217368-217450:-1:exon

position:217368:-1
position: 217368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217450:-1
position: 217450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207963-209145:-1:exon

position:209145:-1
position: 209145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UNC5A
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: UNC5A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 310396..320223
location: region:310396-320223:1
so has part: feature:310396-320223:1:exon
subclass of: SO_0000010

105883842
type: Gene
SIO_000068: ncbigene

position:310396:1
position: 310396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320223:1
position: 320223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310396-320223:1:exon

UNC5A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: UNC5A
product: unc-5 netrin receptor A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012787293.2
SIO_010081: UNC5A
subclass of: SO_0000673
so part of: UNC5A
location: join(310396..310793,311077..311180,311311..311491,312033..312200,312716..312880,313768..313956,314036..314338,316587..316674,317070..317238,317394..317627,317729..317878,317953..318117,318675..318853,319073..320223)
location: region:310396-320223:1
so has part: feature:310396-310793:1:exon
so has part: feature:311077-311180:1:exon
so has part: feature:311311-311491:1:exon
so has part: feature:312033-312200:1:exon
so has part: feature:312716-312880:1:exon
so has part: feature:313768-313956:1:exon
so has part: feature:314036-314338:1:exon
so has part: feature:316587-316674:1:exon
so has part: feature:317070-317238:1:exon
so has part: feature:317394-317627:1:exon
so has part: feature:317729-317878:1:exon
so has part: feature:317953-318117:1:exon
so has part: feature:318675-318853:1:exon
so has part: feature:319073-320223:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:310396-310793:1:exon

position:310793:1
position: 310793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:311077-311180:1:exon

position:311077:1
position: 311077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311180:1
position: 311180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:311311-311491:1:exon

position:311311:1
position: 311311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311491:1
position: 311491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:312033-312200:1:exon

position:312033:1
position: 312033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312200:1
position: 312200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:312716-312880:1:exon

position:312716:1
position: 312716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312880:1
position: 312880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:313768-313956:1:exon

position:313768:1
position: 313768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313956:1
position: 313956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:314036-314338:1:exon

position:314036:1
position: 314036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314338:1
position: 314338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:316587-316674:1:exon

position:316587:1
position: 316587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316674:1
position: 316674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:317070-317238:1:exon

position:317070:1
position: 317070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317238:1
position: 317238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:317394-317627:1:exon

position:317394:1
position: 317394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317627:1
position: 317627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:317729-317878:1:exon

position:317729:1
position: 317729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317878:1
position: 317878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:317953-318117:1:exon

position:317953:1
position: 317953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318117:1
position: 318117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:318675-318853:1:exon

position:318675:1
position: 318675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318853:1
position: 318853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:319073-320223:1:exon

position:319073:1
position: 319073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UNC5A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: UNC5A
product: unc-5 netrin receptor A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012787294.1
SIO_010081: UNC5A
subclass of: SO_0000673
so part of: UNC5A
location: join(310398..310793,311077..311180,311311..311491,312716..312880,313768..313956,314036..314338,316587..316674,317070..317238,317394..317627,317729..317878,317953..318117,318675..318853,319073..320223)
location: region:310398-320223:1
so has part: feature:310398-310793:1:exon
so has part: feature:311077-311180:1:exon
so has part: feature:311311-311491:1:exon
so has part: feature:312716-312880:1:exon
so has part: feature:313768-313956:1:exon
so has part: feature:314036-314338:1:exon
so has part: feature:316587-316674:1:exon
so has part: feature:317070-317238:1:exon
so has part: feature:317394-317627:1:exon
so has part: feature:317729-317878:1:exon
so has part: feature:317953-318117:1:exon
so has part: feature:318675-318853:1:exon
so has part: feature:319073-320223:1:exon

position:310398:1
position: 310398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310398-310793:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311077-311180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311311-311491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312716-312880:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313768-313956:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:314036-314338:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316587-316674:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:317070-317238:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:317394-317627:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317729-317878:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317953-318117:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:318675-318853:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319073-320223:1:exon

UNC5A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: UNC5A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: netrin receptor UNC5A isoform X1
translation: MEVRINVSRQQVEKVFGLEEYWCQCVAWSSSGTTKSQKAYIRIAYLRKNFEQEPLAREVSLEQGLVLPCRPPEGIPPAEVEWLRNEDLVDPALDPNVYITREHSLVVRQARLADTANYTCVAKNIVARRRSASAAVVVYVNGGWSTWTEWSVCSASCGRGWQKRSRSCTNPAPLNGGAFCEGQNVQKTACATLCPVDGSWSPWSKWSACGLDCTHWRSRECSDPAPRNGGEECQGSELDTRNCTSDLCVHTASGPEDVALYVGLIAVAVCLVLLLLVLVLVYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQGSLCPRQDGPSPKFQLSNGHLLSPLGGGRHTLHHSSPTSEAEDFVSRLSTQNYFRSLPRGTSNMAYGTFNFLGGRLMIPNTGISLLIPPDAIPRGKIYEVYLTLHKPEDVRLPLAGCQTLLSPIVSCGPPGVLLTRPVILAMDHCGEPSPDSWSLRLKKQSCEGSWEDVLHLGEEAPSHLYYCQLEAGACYVFTEQLGRFALVGEALSVAAAKRLKLLLFAPLACTSLEYNIRVYCLHDTHEALKEVVQLEKQLGGQLIQEPRVLHFKDSYHNLRLSIHDMPSSLWKSKLLVSYQEIPFYHVWSGAQQYLHCTFTLERASPSTSDLACKMWVWQVEGDGQSFNINFNITKDTRFAELLALESEGGVPALVGPSAFKIPFLIRQKIISSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSPTAMILNLWEARHFPNGNLSQLAAAVAGLGQPEAGLFTVSEAEC
SIO_010081: UNC5A
subclass of: SO_0000673
so part of: UNC5A
location: join(310661..310793,311077..311180,311311..311491,312033..312200,312716..312880,313768..313956,314036..314338,316587..316674,317070..317238,317394..317627,317729..317878,317953..318117,318675..318853,319073..319238)
location: region:310661-319238:1
so has part: feature:310661-310793:1:exon
so has part: feature:311077-311180:1:exon
so has part: feature:311311-311491:1:exon
so has part: feature:312033-312200:1:exon
so has part: feature:312716-312880:1:exon
so has part: feature:313768-313956:1:exon
so has part: feature:314036-314338:1:exon
so has part: feature:316587-316674:1:exon
so has part: feature:317070-317238:1:exon
so has part: feature:317394-317627:1:exon
so has part: feature:317729-317878:1:exon
so has part: feature:317953-318117:1:exon
so has part: feature:318675-318853:1:exon
so has part: feature:319073-319238:1:exon

XP_012642747.1
type: Protein
SIO_000068: ncbiprotein

position:310661:1
position: 310661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319238:1
position: 319238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310661-310793:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311077-311180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311311-311491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312033-312200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312716-312880:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313768-313956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:314036-314338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316587-316674:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:317070-317238:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317394-317627:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317729-317878:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:317953-318117:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:318675-318853:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:319073-319238:1:exon

UNC5A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: UNC5A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: netrin receptor UNC5A isoform X2
translation: MEVRINVSRQQVEKVFGLEEYWCQCVAWSSSGTTKSQKAYIRIAYLRKNFEQEPLAREVSLEQGLVLPCRPPEGIPPAEVEWLRNEDLVDPALDPNVYITREHSLVVRQARLADTANYTCVAKNIVARRRSASAAVVVYVDGSWSPWSKWSACGLDCTHWRSRECSDPAPRNGGEECQGSELDTRNCTSDLCVHTASGPEDVALYVGLIAVAVCLVLLLLVLVLVYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLLTIQPDLSTTTTTYQGSLCPRQDGPSPKFQLSNGHLLSPLGGGRHTLHHSSPTSEAEDFVSRLSTQNYFRSLPRGTSNMAYGTFNFLGGRLMIPNTGISLLIPPDAIPRGKIYEVYLTLHKPEDVRLPLAGCQTLLSPIVSCGPPGVLLTRPVILAMDHCGEPSPDSWSLRLKKQSCEGSWEDVLHLGEEAPSHLYYCQLEAGACYVFTEQLGRFALVGEALSVAAAKRLKLLLFAPLACTSLEYNIRVYCLHDTHEALKEVVQLEKQLGGQLIQEPRVLHFKDSYHNLRLSIHDMPSSLWKSKLLVSYQEIPFYHVWSGAQQYLHCTFTLERASPSTSDLACKMWVWQVEGDGQSFNINFNITKDTRFAELLALESEGGVPALVGPSAFKIPFLIRQKIISSLDPPCSRGADWRTLAQKLHLDSHLSFFASKPSPTAMILNLWEARHFPNGNLSQLAAAVAGLGQPEAGLFTVSEAEC
SIO_010081: UNC5A
subclass of: SO_0000673
so part of: UNC5A
location: join(310661..310793,311077..311180,311311..311491,312716..312880,313768..313956,314036..314338,316587..316674,317070..317238,317394..317627,317729..317878,317953..318117,318675..318853,319073..319238)
location: region:310661-319238:1
so has part: feature:310661-310793:1:exon
so has part: feature:311077-311180:1:exon
so has part: feature:311311-311491:1:exon
so has part: feature:312716-312880:1:exon
so has part: feature:313768-313956:1:exon
so has part: feature:314036-314338:1:exon
so has part: feature:316587-316674:1:exon
so has part: feature:317070-317238:1:exon
so has part: feature:317394-317627:1:exon
so has part: feature:317729-317878:1:exon
so has part: feature:317953-318117:1:exon
so has part: feature:318675-318853:1:exon
so has part: feature:319073-319238:1:exon

XP_012642748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310661-310793:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311077-311180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311311-311491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312716-312880:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313768-313956:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:314036-314338:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316587-316674:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:317070-317238:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:317394-317627:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317729-317878:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317953-318117:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:318675-318853:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319073-319238:1:exon

HK3
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: HK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(320194..335897)
location: region:320194-335897:-1
so has part: feature:320194-335897:-1:exon
subclass of: SO_0000010

105883841
type: Gene
SIO_000068: ncbigene

position:320194:-1
position: 320194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335897:-1
position: 335897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320194-335897:-1:exon

HK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: HK3
product: hexokinase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012787290.2
SIO_010081: HK3
subclass of: SO_0000673
so part of: HK3
location: complement(join(320194..320540,320624..320857,321390..321545,321656..321839,323237..323336,323509..323604,325747..325866,325956..326095,326200..326495,326825..327058,327204..327359,327947..328130,328208..328307,329420..329515,329614..329733,329827..329981,330176..330338,333705..333810,335791..335897))
location: region:320194-335897:-1
so has part: feature:335791-335897:-1:exon
so has part: feature:333705-333810:-1:exon
so has part: feature:330176-330338:-1:exon
so has part: feature:329827-329981:-1:exon
so has part: feature:329614-329733:-1:exon
so has part: feature:329420-329515:-1:exon
so has part: feature:328208-328307:-1:exon
so has part: feature:327947-328130:-1:exon
so has part: feature:327204-327359:-1:exon
so has part: feature:326825-327058:-1:exon
so has part: feature:326200-326495:-1:exon
so has part: feature:325956-326095:-1:exon
so has part: feature:325747-325866:-1:exon
so has part: feature:323509-323604:-1:exon
so has part: feature:323237-323336:-1:exon
so has part: feature:321656-321839:-1:exon
so has part: feature:321390-321545:-1:exon
so has part: feature:320624-320857:-1:exon
so has part: feature:320194-320540:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335791-335897:-1:exon

position:335791:-1
position: 335791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333705-333810:-1:exon

position:333705:-1
position: 333705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333810:-1
position: 333810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:330176-330338:-1:exon

position:330176:-1
position: 330176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330338:-1
position: 330338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:329827-329981:-1:exon

position:329827:-1
position: 329827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329981:-1
position: 329981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:329614-329733:-1:exon

position:329614:-1
position: 329614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329733:-1
position: 329733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:329420-329515:-1:exon

position:329420:-1
position: 329420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329515:-1
position: 329515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:328208-328307:-1:exon

position:328208:-1
position: 328208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328307:-1
position: 328307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:327947-328130:-1:exon

position:327947:-1
position: 327947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328130:-1
position: 328130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:327204-327359:-1:exon

position:327204:-1
position: 327204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327359:-1
position: 327359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:326825-327058:-1:exon

position:326825:-1
position: 326825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327058:-1
position: 327058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:326200-326495:-1:exon

position:326200:-1
position: 326200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326495:-1
position: 326495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:325956-326095:-1:exon

position:325956:-1
position: 325956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326095:-1
position: 326095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:325747-325866:-1:exon

position:325747:-1
position: 325747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325866:-1
position: 325866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:323509-323604:-1:exon

position:323509:-1
position: 323509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323604:-1
position: 323604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:323237-323336:-1:exon

position:323237:-1
position: 323237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323336:-1
position: 323336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:321656-321839:-1:exon

position:321656:-1
position: 321656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321839:-1
position: 321839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:321390-321545:-1:exon

position:321390:-1
position: 321390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321545:-1
position: 321545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:320624-320857:-1:exon

position:320624:-1
position: 320624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320857:-1
position: 320857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:320194-320540:-1:exon

position:320540:-1
position: 320540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: HK3
product: hexokinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012787291.2
SIO_010081: HK3
subclass of: SO_0000673
so part of: HK3
location: complement(join(320379..320540,320624..320857,321390..321545,321656..321839,323237..323336,323509..323604,325747..325866,325956..326095,326200..326495,326825..327058,327204..327359,327947..328130,328208..328307,329420..329515,329683..329733,329827..329981,330176..330338,333705..333810,335791..335897))
location: region:320379-335897:-1
so has part: feature:335791-335897:-1:exon
so has part: feature:333705-333810:-1:exon
so has part: feature:330176-330338:-1:exon
so has part: feature:329827-329981:-1:exon
so has part: feature:329683-329733:-1:exon
so has part: feature:329420-329515:-1:exon
so has part: feature:328208-328307:-1:exon
so has part: feature:327947-328130:-1:exon
so has part: feature:327204-327359:-1:exon
so has part: feature:326825-327058:-1:exon
so has part: feature:326200-326495:-1:exon
so has part: feature:325956-326095:-1:exon
so has part: feature:325747-325866:-1:exon
so has part: feature:323509-323604:-1:exon
so has part: feature:323237-323336:-1:exon
so has part: feature:321656-321839:-1:exon
so has part: feature:321390-321545:-1:exon
so has part: feature:320624-320857:-1:exon
so has part: feature:320379-320540:-1:exon

position:320379:-1
position: 320379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335791-335897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333705-333810:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330176-330338:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:329827-329981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:329683-329733:-1:exon

position:329683:-1
position: 329683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:329420-329515:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:328208-328307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:327947-328130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:327204-327359:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:326825-327058:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:326200-326495:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:325956-326095:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:325747-325866:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:323509-323604:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:323237-323336:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:321656-321839:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:321390-321545:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:320624-320857:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:320379-320540:-1:exon

HK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: HK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hexokinase-3 isoform X2
translation: MDAAGPAGVQQGAGALGCSQEASPRPADSSGLVQECLQQFKVTEAQLQQIQASLLVSMEQALRGEASPAPAVRMLPTYVGSIPHGTEQGDFLVLELGAKGASLRVLWVTLTGIEGHRVEPRSQEFVIPQEVMLGAGQQLFDFAAHCLSEFLDAHPSTLISWTKGFRCSGVEGQDVVQLLRDAIQRQGAHSVEVVAVVNDTVGTMMGCAPGLRPCEVGLVVDTGTNACYMEEARHVAALDDDRGRMCVSVEWGSFRDDAALGPLLTAFDRTLDRESLNPGAQRFEKMIGGLYLGELVRLVLVHLARRGVLFGGCTSPALLSRGSVLLEHVAEMEDPSAGAARVHAILQGLGLSPDSSDAELVRHVCAAVCTRAAQLCAAALASVLSRMQRGREHRALRVAVATGGRVCEQHPRFCRILRETVKVLAPECDVSFVPSVDGGGRGVAMVTAVAARLASHRRLLEETLAPFRLSREQLAVVQAQMREAMAKGLRGEASSLRMLPTYVRATPDGSERGDFLALDLGGTNFRVLLVRVAAGGVQITSQVYSIPECVAQGSGQQLFDHIVDCIVDFQQKQGLSGQSLPLGFTFSFPCRQLGLDQGILLNWTKGFNASDCEGQDIVRLLRAAIGRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGLTGGPGRMCVNMEWGAFGDDGSLDALSTCFDASVDRASINPGKQRFEKMISGMYLGEIVRHVLLRLTSLGVLFRGQQMGRLQTRDIFKTKFLSEIESDSLALRQVRAILEDLGLPLTSDDALVVLEVCQAVSQRAARLCGAGVAAVAERMRESRGLEELAVSVGVDGTLYKLHPHFSSLVAATVRELAPRCAVTFLQSEDGSGKGAALVTAVACRLAQKTRV
SIO_010081: HK3
subclass of: SO_0000673
so part of: HK3
location: complement(join(320396..320540,320624..320857,321390..321545,321656..321839,323237..323336,323509..323604,325747..325866,325956..326095,326200..326495,326825..327058,327204..327359,327947..328130,328208..328307,329420..329515,329683..329733,329827..329981,330176..330338,333705..333800))
location: region:320396-333800:-1
so has part: feature:333705-333800:-1:exon
so has part: feature:330176-330338:-1:exon
so has part: feature:329827-329981:-1:exon
so has part: feature:329683-329733:-1:exon
so has part: feature:329420-329515:-1:exon
so has part: feature:328208-328307:-1:exon
so has part: feature:327947-328130:-1:exon
so has part: feature:327204-327359:-1:exon
so has part: feature:326825-327058:-1:exon
so has part: feature:326200-326495:-1:exon
so has part: feature:325956-326095:-1:exon
so has part: feature:325747-325866:-1:exon
so has part: feature:323509-323604:-1:exon
so has part: feature:323237-323336:-1:exon
so has part: feature:321656-321839:-1:exon
so has part: feature:321390-321545:-1:exon
so has part: feature:320624-320857:-1:exon
so has part: feature:320396-320540:-1:exon

XP_012642745.2
type: Protein
SIO_000068: ncbiprotein

position:320396:-1
position: 320396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333800:-1
position: 333800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333705-333800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330176-330338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329827-329981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:329683-329733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:329420-329515:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:328208-328307:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:327947-328130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:327204-327359:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:326825-327058:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:326200-326495:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:325956-326095:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:325747-325866:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:323509-323604:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:323237-323336:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:321656-321839:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:321390-321545:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:320624-320857:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:320396-320540:-1:exon

HK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: HK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hexokinase-3 isoform X1
translation: MDAAGPAGVQQGAGALGCSQEASPRPADSSGLVQECLQQFKVTEAQLQQIQASLLVSMEQALRGEASPAPAVRMLPTYVGSIPHGTEQGDFLVLELGAKGASLRVLWVTLTGIEGHRVEPRSQEFVIPQEVMLGAGQQLFDFAAHCLSEFLDAHPVSRQGLQLGLSFSFPCHQTGLDRSTLISWTKGFRCSGVEGQDVVQLLRDAIQRQGAHSVEVVAVVNDTVGTMMGCAPGLRPCEVGLVVDTGTNACYMEEARHVAALDDDRGRMCVSVEWGSFRDDAALGPLLTAFDRTLDRESLNPGAQRFEKMIGGLYLGELVRLVLVHLARRGVLFGGCTSPALLSRGSVLLEHVAEMEDPSAGAARVHAILQGLGLSPDSSDAELVRHVCAAVCTRAAQLCAAALASVLSRMQRGREHRALRVAVATGGRVCEQHPRFCRILRETVKVLAPECDVSFVPSVDGGGRGVAMVTAVAARLASHRRLLEETLAPFRLSREQLAVVQAQMREAMAKGLRGEASSLRMLPTYVRATPDGSERGDFLALDLGGTNFRVLLVRVAAGGVQITSQVYSIPECVAQGSGQQLFDHIVDCIVDFQQKQGLSGQSLPLGFTFSFPCRQLGLDQGILLNWTKGFNASDCEGQDIVRLLRAAIGRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGLTGGPGRMCVNMEWGAFGDDGSLDALSTCFDASVDRASINPGKQRFEKMISGMYLGEIVRHVLLRLTSLGVLFRGQQMGRLQTRDIFKTKFLSEIESDSLALRQVRAILEDLGLPLTSDDALVVLEVCQAVSQRAARLCGAGVAAVAERMRESRGLEELAVSVGVDGTLYKLHPHFSSLVAATVRELAPRCAVTFLQSEDGSGKGAALVTAVACRLAQKTRV
SIO_010081: HK3
subclass of: SO_0000673
so part of: HK3
location: complement(join(320396..320540,320624..320857,321390..321545,321656..321839,323237..323336,323509..323604,325747..325866,325956..326095,326200..326495,326825..327058,327204..327359,327947..328130,328208..328307,329420..329515,329614..329733,329827..329981,330176..330338,333705..333800))
location: region:320396-333800:-1
so has part: feature:333705-333800:-1:exon
so has part: feature:330176-330338:-1:exon
so has part: feature:329827-329981:-1:exon
so has part: feature:329614-329733:-1:exon
so has part: feature:329420-329515:-1:exon
so has part: feature:328208-328307:-1:exon
so has part: feature:327947-328130:-1:exon
so has part: feature:327204-327359:-1:exon
so has part: feature:326825-327058:-1:exon
so has part: feature:326200-326495:-1:exon
so has part: feature:325956-326095:-1:exon
so has part: feature:325747-325866:-1:exon
so has part: feature:323509-323604:-1:exon
so has part: feature:323237-323336:-1:exon
so has part: feature:321656-321839:-1:exon
so has part: feature:321390-321545:-1:exon
so has part: feature:320624-320857:-1:exon
so has part: feature:320396-320540:-1:exon

XP_012642744.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333705-333800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330176-330338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329827-329981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:329614-329733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:329420-329515:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:328208-328307:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:327947-328130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:327204-327359:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:326825-327058:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:326200-326495:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:325956-326095:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:325747-325866:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:323509-323604:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:323237-323336:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:321656-321839:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:321390-321545:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:320624-320857:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:320396-320540:-1:exon

UIMC1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: UIMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(342852..430543)
location: region:342852-430543:-1
so has part: feature:342852-430543:-1:exon
subclass of: SO_0000010

105883843
type: Gene
SIO_000068: ncbigene

position:342852:-1
position: 342852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430543:-1
position: 430543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342852-430543:-1:exon

UIMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: UIMC1
product: ubiquitin interaction motif containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 199 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012787296.2
SIO_010081: UIMC1
subclass of: SO_0000673
so part of: UIMC1
location: complement(join(342852..343441,343972..344014,345095..345158,347367..347538,349939..350017,376815..376968,384231..384334,387514..387590,389607..389671,396675..397411,397714..397819,398528..398652,408029..408113,414901..415055,430430..430543))
location: region:342852-430543:-1
so has part: feature:430430-430543:-1:exon
so has part: feature:414901-415055:-1:exon
so has part: feature:408029-408113:-1:exon
so has part: feature:398528-398652:-1:exon
so has part: feature:397714-397819:-1:exon
so has part: feature:396675-397411:-1:exon
so has part: feature:389607-389671:-1:exon
so has part: feature:387514-387590:-1:exon
so has part: feature:384231-384334:-1:exon
so has part: feature:376815-376968:-1:exon
so has part: feature:349939-350017:-1:exon
so has part: feature:347367-347538:-1:exon
so has part: feature:345095-345158:-1:exon
so has part: feature:343972-344014:-1:exon
so has part: feature:342852-343441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430430-430543:-1:exon

position:430430:-1
position: 430430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414901-415055:-1:exon

position:414901:-1
position: 414901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415055:-1
position: 415055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:408029-408113:-1:exon

position:408029:-1
position: 408029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408113:-1
position: 408113
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:398528-398652:-1:exon

position:398528:-1
position: 398528
reference: sequence
type: ReverseStrandPosition
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position:398652:-1
position: 398652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:397714-397819:-1:exon

position:397714:-1
position: 397714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397819:-1
position: 397819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:396675-397411:-1:exon

position:396675:-1
position: 396675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397411:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:389607-389671:-1:exon

position:389607:-1
position: 389607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389671:-1
position: 389671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:387514-387590:-1:exon

position:387514:-1
position: 387514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387590:-1
position: 387590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:384231-384334:-1:exon

position:384231:-1
position: 384231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384334:-1
position: 384334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:376815-376968:-1:exon

position:376815:-1
position: 376815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376968:-1
position: 376968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:349939-350017:-1:exon

position:349939:-1
position: 349939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350017:-1
position: 350017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:347367-347538:-1:exon

position:347367:-1
position: 347367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347538:-1
position: 347538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:345095-345158:-1:exon

position:345095:-1
position: 345095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345158:-1
position: 345158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:343972-344014:-1:exon

position:343972:-1
position: 343972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344014:-1
position: 344014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:342852-343441:-1:exon

position:343441:-1
position: 343441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UIMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: UIMC1
product: ubiquitin interaction motif containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 210 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012787295.2
SIO_010081: UIMC1
subclass of: SO_0000673
so part of: UIMC1
location: complement(join(342852..343441,343972..344014,345095..345158,347367..347538,349939..350017,376815..376968,384231..384334,387514..387590,389607..389671,396675..397411,397714..397819,398528..398652,408029..408113,414901..415055,430315..430543))
location: region:342852-430543:-1
so has part: feature:430315-430543:-1:exon
so has part: feature:414901-415055:-1:exon
so has part: feature:408029-408113:-1:exon
so has part: feature:398528-398652:-1:exon
so has part: feature:397714-397819:-1:exon
so has part: feature:396675-397411:-1:exon
so has part: feature:389607-389671:-1:exon
so has part: feature:387514-387590:-1:exon
so has part: feature:384231-384334:-1:exon
so has part: feature:376815-376968:-1:exon
so has part: feature:349939-350017:-1:exon
so has part: feature:347367-347538:-1:exon
so has part: feature:345095-345158:-1:exon
so has part: feature:343972-344014:-1:exon
so has part: feature:342852-343441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430315-430543:-1:exon

position:430315:-1
position: 430315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414901-415055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:408029-408113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398528-398652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:397714-397819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:396675-397411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389607-389671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387514-387590:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:384231-384334:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:376815-376968:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:349939-350017:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:347367-347538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345095-345158:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:343972-344014:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:342852-343441:-1:exon

UIMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: UIMC1
product: ubiquitin interaction motif containing 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 145 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012787301.2
SIO_010081: UIMC1
subclass of: SO_0000673
so part of: UIMC1
location: complement(join(342852..343441,343972..344014,345095..345158,347367..347538,349939..350017,376815..376968,384231..384334,387514..387590,389607..389671,398528..398652,408029..408113,414901..415055,430315..430541))
location: region:342852-430541:-1
so has part: feature:430315-430541:-1:exon
so has part: feature:414901-415055:-1:exon
so has part: feature:408029-408113:-1:exon
so has part: feature:398528-398652:-1:exon
so has part: feature:389607-389671:-1:exon
so has part: feature:387514-387590:-1:exon
so has part: feature:384231-384334:-1:exon
so has part: feature:376815-376968:-1:exon
so has part: feature:349939-350017:-1:exon
so has part: feature:347367-347538:-1:exon
so has part: feature:345095-345158:-1:exon
so has part: feature:343972-344014:-1:exon
so has part: feature:342852-343441:-1:exon

position:430541:-1
position: 430541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430315-430541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:414901-415055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:408029-408113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398528-398652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389607-389671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387514-387590:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:384231-384334:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:376815-376968:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:349939-350017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:347367-347538:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:345095-345158:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:343972-344014:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:342852-343441:-1:exon

UIMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: UIMC1
product: ubiquitin interaction motif containing 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 177 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012787300.2
SIO_010081: UIMC1
subclass of: SO_0000673
so part of: UIMC1
location: complement(join(342852..343441,343972..344014,345095..345158,347367..347538,349939..350017,376815..376968,384231..384334,387514..387590,389607..389671,396675..396875,397173..397411,397714..397819,398528..398652,408029..408113,414901..415055,430315..430541))
location: region:342852-430541:-1
so has part: feature:430315-430541:-1:exon
so has part: feature:414901-415055:-1:exon
so has part: feature:408029-408113:-1:exon
so has part: feature:398528-398652:-1:exon
so has part: feature:397714-397819:-1:exon
so has part: feature:397173-397411:-1:exon
so has part: feature:396675-396875:-1:exon
so has part: feature:389607-389671:-1:exon
so has part: feature:387514-387590:-1:exon
so has part: feature:384231-384334:-1:exon
so has part: feature:376815-376968:-1:exon
so has part: feature:349939-350017:-1:exon
so has part: feature:347367-347538:-1:exon
so has part: feature:345095-345158:-1:exon
so has part: feature:343972-344014:-1:exon
so has part: feature:342852-343441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430315-430541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:414901-415055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:408029-408113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398528-398652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:397714-397819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:397173-397411:-1:exon

position:397173:-1
position: 397173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:396675-396875:-1:exon

position:396875:-1
position: 396875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:389607-389671:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:387514-387590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:384231-384334:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:376815-376968:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:349939-350017:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:347367-347538:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:345095-345158:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:343972-344014:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:342852-343441:-1:exon

UIMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: UIMC1
product: ubiquitin interaction motif containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 199 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012787297.2
SIO_010081: UIMC1
subclass of: SO_0000673
so part of: UIMC1
location: complement(join(342852..343441,343972..344014,345095..345158,347367..347538,349939..350017,376815..376968,384231..384334,387514..387590,389607..389671,396675..397411,397714..397819,398528..398652,408029..408113,414901..415055,427113..427211,430315..430411))
location: region:342852-430411:-1
so has part: feature:430315-430411:-1:exon
so has part: feature:427113-427211:-1:exon
so has part: feature:414901-415055:-1:exon
so has part: feature:408029-408113:-1:exon
so has part: feature:398528-398652:-1:exon
so has part: feature:397714-397819:-1:exon
so has part: feature:396675-397411:-1:exon
so has part: feature:389607-389671:-1:exon
so has part: feature:387514-387590:-1:exon
so has part: feature:384231-384334:-1:exon
so has part: feature:376815-376968:-1:exon
so has part: feature:349939-350017:-1:exon
so has part: feature:347367-347538:-1:exon
so has part: feature:345095-345158:-1:exon
so has part: feature:343972-344014:-1:exon
so has part: feature:342852-343441:-1:exon

position:430411:-1
position: 430411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430315-430411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:427113-427211:-1:exon

position:427113:-1
position: 427113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427211:-1
position: 427211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:414901-415055:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:408029-408113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:398528-398652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:397714-397819:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:396675-397411:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389607-389671:-1:exon

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SIO_000300: 9
SIO_000628: feature:387514-387590:-1:exon

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SIO_000300: 10
SIO_000628: feature:384231-384334:-1:exon

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SIO_000300: 11
SIO_000628: feature:376815-376968:-1:exon

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SIO_000300: 12
SIO_000628: feature:349939-350017:-1:exon

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SIO_000300: 13
SIO_000628: feature:347367-347538:-1:exon

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SIO_000300: 14
SIO_000628: feature:345095-345158:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:343972-344014:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:342852-343441:-1:exon

UIMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: UIMC1
product: ubiquitin interaction motif containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 199 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012787299.2
SIO_010081: UIMC1
subclass of: SO_0000673
so part of: UIMC1
location: complement(join(342852..343441,343972..344014,345095..345158,347367..347538,349939..350017,376815..376968,384231..384334,387514..387590,389607..389671,396675..397411,397714..397819,398528..398652,408029..408113,414901..415055,430249..430405))
location: region:342852-430405:-1
so has part: feature:430249-430405:-1:exon
so has part: feature:414901-415055:-1:exon
so has part: feature:408029-408113:-1:exon
so has part: feature:398528-398652:-1:exon
so has part: feature:397714-397819:-1:exon
so has part: feature:396675-397411:-1:exon
so has part: feature:389607-389671:-1:exon
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so has part: feature:384231-384334:-1:exon
so has part: feature:376815-376968:-1:exon
so has part: feature:349939-350017:-1:exon
so has part: feature:347367-347538:-1:exon
so has part: feature:345095-345158:-1:exon
so has part: feature:343972-344014:-1:exon
so has part: feature:342852-343441:-1:exon

position:430405:-1
position: 430405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430249-430405:-1:exon

position:430249:-1
position: 430249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414901-415055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:408029-408113:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:396675-397411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389607-389671:-1:exon

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SIO_000300: 8
SIO_000628: feature:387514-387590:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:384231-384334:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:376815-376968:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:349939-350017:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:347367-347538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345095-345158:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:343972-344014:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:342852-343441:-1:exon

UIMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: UIMC1
product: ubiquitin interaction motif containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 199 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012787298.2
SIO_010081: UIMC1
subclass of: SO_0000673
so part of: UIMC1
location: complement(join(342852..343441,343972..344014,345095..345158,347367..347538,349939..350017,376815..376968,384231..384334,387514..387590,389607..389671,396675..397411,397714..397819,398528..398652,408029..408113,414901..415055,417455..417547))
location: region:342852-417547:-1
so has part: feature:417455-417547:-1:exon
so has part: feature:414901-415055:-1:exon
so has part: feature:408029-408113:-1:exon
so has part: feature:398528-398652:-1:exon
so has part: feature:397714-397819:-1:exon
so has part: feature:396675-397411:-1:exon
so has part: feature:389607-389671:-1:exon
so has part: feature:387514-387590:-1:exon
so has part: feature:384231-384334:-1:exon
so has part: feature:376815-376968:-1:exon
so has part: feature:349939-350017:-1:exon
so has part: feature:347367-347538:-1:exon
so has part: feature:345095-345158:-1:exon
so has part: feature:343972-344014:-1:exon
so has part: feature:342852-343441:-1:exon

position:417547:-1
position: 417547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417455-417547:-1:exon

position:417455:-1
position: 417455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414901-415055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:408029-408113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398528-398652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:397714-397819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:396675-397411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389607-389671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387514-387590:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:384231-384334:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:376815-376968:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:349939-350017:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:347367-347538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345095-345158:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:343972-344014:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:342852-343441:-1:exon

UIMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: UIMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRCA1-A complex subunit RAP80 isoform X3
translation: MPRRKKKVKEASESQNLEKKGTETTSSVSVKRKRRLEDAFIVISDSDGEEPKEENGLQKAKTKQSNRAKCLAKRKIAQMTEEEQFALALKMSEQEAREVNSQEEEEEELLRKAIAESLNSSQGLFVEETSEEGNSVPASQSVAALTSKRSSVLTPESSAEEITVCPETQLSSPEILDPEREVSPGNRETSDEVRIIMADKEVANKGDAKKEVSISTFSSSTRVSCPLCDQGFPPTKIERHAMYCNGLKEQDTVLTRRQKEAKNKSDSGTAAQTSLDIDKNEKCYLCKSMIPLREYQCHVDSCLHLARGDHGDGPEESGRACSTVEGKWQQRLRNPKEKSHSEGRLLSLLEHSEYKTADAEIKTKSSETGAFRAPSLGVEEAGCSRQMQSSLTHLDLHESPIKSFVSISEATDCLVDFKKQLTVRPGSRTRTKAGRGRRRKS
SIO_010081: UIMC1
subclass of: SO_0000673
so part of: UIMC1
location: complement(join(343231..343441,343972..344014,345095..345158,347367..347538,349939..350017,376815..376968,384231..384334,387514..387590,389607..389671,398528..398652,408029..408113,414901..415047))
location: region:343231-415047:-1
so has part: feature:414901-415047:-1:exon
so has part: feature:408029-408113:-1:exon
so has part: feature:398528-398652:-1:exon
so has part: feature:389607-389671:-1:exon
so has part: feature:387514-387590:-1:exon
so has part: feature:384231-384334:-1:exon
so has part: feature:376815-376968:-1:exon
so has part: feature:349939-350017:-1:exon
so has part: feature:347367-347538:-1:exon
so has part: feature:345095-345158:-1:exon
so has part: feature:343972-344014:-1:exon
so has part: feature:343231-343441:-1:exon

XP_012642755.1
type: Protein
SIO_000068: ncbiprotein

position:343231:-1
position: 343231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415047:-1
position: 415047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414901-415047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408029-408113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398528-398652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389607-389671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387514-387590:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:384231-384334:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:376815-376968:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349939-350017:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:347367-347538:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:345095-345158:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:343972-344014:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:343231-343441:-1:exon

UIMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: UIMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRCA1-A complex subunit RAP80 isoform X2
translation: MPRRKKKVKEASESQNLEKKGTETTSSVSVKRKRRLEDAFIVISDSDGEEPKEENGLQKAKTKQSNRAKCLAKRKIAQMTEEEQFALALKMSEQEAREVNSQEEEEEELLRKAIAESLNSCRPSDASATRSRPLATGPSSQSHQEKTTDSETTEGIWQLVPPSLFKGSHISQGNEAEEREEPWDHTENTEEEPVSGSSGSWDQSSQPVFENENVKCFDRCTGHLAEHTQCGKPQNECGQGDQASEKNEGISEDKRNEDKEERQESRASVWHSKPKDFQESPVRSLKEKLLLEEEPTTSHGQSSQGLFVEETSEEGNSVPASQSVAALTSKRSSVLTPESSAEEITVCPETQLSSPEILDPEREVSPGNRETSDEVRIIMADKEVANKGDAKKEVSISTFSSSTRVSCPLCDQGFPPTKIERHAMYCNGLKEQDTVLTRRQKEAKNKSDSGTAAQTSLDIDKNEKCYLCKSMIPLREYQCHVDSCLHLARGDHGDGPEESGRACSTVEGKWQQRLRNPKEKSHSEGRLLSLLEHSEYKTADAEIKTKSSETGAFRAPSLGVEEAGCSRQMQSSLTHLDLHESPIKSFVSISEATDCLVDFKKQLTVRPGSRTRTKAGRGRRRKS
SIO_010081: UIMC1
subclass of: SO_0000673
so part of: UIMC1
location: complement(join(343231..343441,343972..344014,345095..345158,347367..347538,349939..350017,376815..376968,384231..384334,387514..387590,389607..389671,396675..396875,397173..397411,397714..397819,398528..398652,408029..408113,414901..415047))
location: region:343231-415047:-1
so has part: feature:414901-415047:-1:exon
so has part: feature:408029-408113:-1:exon
so has part: feature:398528-398652:-1:exon
so has part: feature:397714-397819:-1:exon
so has part: feature:397173-397411:-1:exon
so has part: feature:396675-396875:-1:exon
so has part: feature:389607-389671:-1:exon
so has part: feature:387514-387590:-1:exon
so has part: feature:384231-384334:-1:exon
so has part: feature:376815-376968:-1:exon
so has part: feature:349939-350017:-1:exon
so has part: feature:347367-347538:-1:exon
so has part: feature:345095-345158:-1:exon
so has part: feature:343972-344014:-1:exon
so has part: feature:343231-343441:-1:exon

XP_012642754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414901-415047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408029-408113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398528-398652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:397714-397819:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:397173-397411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:396675-396875:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389607-389671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387514-387590:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:384231-384334:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:376815-376968:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:349939-350017:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:347367-347538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345095-345158:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:343972-344014:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:343231-343441:-1:exon

UIMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: UIMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRCA1-A complex subunit RAP80 isoform X1
translation: MPRRKKKVKEASESQNLEKKGTETTSSVSVKRKRRLEDAFIVISDSDGEEPKEENGLQKAKTKQSNRAKCLAKRKIAQMTEEEQFALALKMSEQEAREVNSQEEEEEELLRKAIAESLNSCRPSDASATRSRPLATGPSSQSHQEKTTDSETTEGIWQLVPPSLFKGSHISQGNEAEEREEPWDHTENTEEEPVSGSSGSWDQSSQPVFENENVKCFDRCTGHLAEHTQCGKPQESTGRGCAFLKASQGRGDTFRHCLPTPSDAKGLQDIGGTVHYFWGIPFCPAGIDPNQYTKVILCQLEVYQKSLKMAQRQLFKKKGFGEPVLPRPPSLIQNECGQGDQASEKNEGISEDKRNEDKEERQESRASVWHSKPKDFQESPVRSLKEKLLLEEEPTTSHGQSSQGLFVEETSEEGNSVPASQSVAALTSKRSSVLTPESSAEEITVCPETQLSSPEILDPEREVSPGNRETSDEVRIIMADKEVANKGDAKKEVSISTFSSSTRVSCPLCDQGFPPTKIERHAMYCNGLKEQDTVLTRRQKEAKNKSDSGTAAQTSLDIDKNEKCYLCKSMIPLREYQCHVDSCLHLARGDHGDGPEESGRACSTVEGKWQQRLRNPKEKSHSEGRLLSLLEHSEYKTADAEIKTKSSETGAFRAPSLGVEEAGCSRQMQSSLTHLDLHESPIKSFVSISEATDCLVDFKKQLTVRPGSRTRTKAGRGRRRKS
SIO_010081: UIMC1
subclass of: SO_0000673
so part of: UIMC1
location: complement(join(343231..343441,343972..344014,345095..345158,347367..347538,349939..350017,376815..376968,384231..384334,387514..387590,389607..389671,396675..397411,397714..397819,398528..398652,408029..408113,414901..415047))
location: region:343231-415047:-1
so has part: feature:414901-415047:-1:exon
so has part: feature:408029-408113:-1:exon
so has part: feature:398528-398652:-1:exon
so has part: feature:397714-397819:-1:exon
so has part: feature:396675-397411:-1:exon
so has part: feature:389607-389671:-1:exon
so has part: feature:387514-387590:-1:exon
so has part: feature:384231-384334:-1:exon
so has part: feature:376815-376968:-1:exon
so has part: feature:349939-350017:-1:exon
so has part: feature:347367-347538:-1:exon
so has part: feature:345095-345158:-1:exon
so has part: feature:343972-344014:-1:exon
so has part: feature:343231-343441:-1:exon

XP_012642749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414901-415047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408029-408113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398528-398652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:397714-397819:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:396675-397411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389607-389671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387514-387590:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:384231-384334:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376815-376968:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:349939-350017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:347367-347538:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345095-345158:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343972-344014:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:343231-343441:-1:exon

UIMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: UIMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRCA1-A complex subunit RAP80 isoform X1
translation: MPRRKKKVKEASESQNLEKKGTETTSSVSVKRKRRLEDAFIVISDSDGEEPKEENGLQKAKTKQSNRAKCLAKRKIAQMTEEEQFALALKMSEQEAREVNSQEEEEEELLRKAIAESLNSCRPSDASATRSRPLATGPSSQSHQEKTTDSETTEGIWQLVPPSLFKGSHISQGNEAEEREEPWDHTENTEEEPVSGSSGSWDQSSQPVFENENVKCFDRCTGHLAEHTQCGKPQESTGRGCAFLKASQGRGDTFRHCLPTPSDAKGLQDIGGTVHYFWGIPFCPAGIDPNQYTKVILCQLEVYQKSLKMAQRQLFKKKGFGEPVLPRPPSLIQNECGQGDQASEKNEGISEDKRNEDKEERQESRASVWHSKPKDFQESPVRSLKEKLLLEEEPTTSHGQSSQGLFVEETSEEGNSVPASQSVAALTSKRSSVLTPESSAEEITVCPETQLSSPEILDPEREVSPGNRETSDEVRIIMADKEVANKGDAKKEVSISTFSSSTRVSCPLCDQGFPPTKIERHAMYCNGLKEQDTVLTRRQKEAKNKSDSGTAAQTSLDIDKNEKCYLCKSMIPLREYQCHVDSCLHLARGDHGDGPEESGRACSTVEGKWQQRLRNPKEKSHSEGRLLSLLEHSEYKTADAEIKTKSSETGAFRAPSLGVEEAGCSRQMQSSLTHLDLHESPIKSFVSISEATDCLVDFKKQLTVRPGSRTRTKAGRGRRRKS
SIO_010081: UIMC1
subclass of: SO_0000673
so part of: UIMC1
location: complement(join(343231..343441,343972..344014,345095..345158,347367..347538,349939..350017,376815..376968,384231..384334,387514..387590,389607..389671,396675..397411,397714..397819,398528..398652,408029..408113,414901..415047))
location: region:343231-415047:-1
so has part: feature:414901-415047:-1:exon
so has part: feature:408029-408113:-1:exon
so has part: feature:398528-398652:-1:exon
so has part: feature:397714-397819:-1:exon
so has part: feature:396675-397411:-1:exon
so has part: feature:389607-389671:-1:exon
so has part: feature:387514-387590:-1:exon
so has part: feature:384231-384334:-1:exon
so has part: feature:376815-376968:-1:exon
so has part: feature:349939-350017:-1:exon
so has part: feature:347367-347538:-1:exon
so has part: feature:345095-345158:-1:exon
so has part: feature:343972-344014:-1:exon
so has part: feature:343231-343441:-1:exon

XP_012642750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414901-415047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408029-408113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398528-398652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:397714-397819:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:396675-397411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389607-389671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387514-387590:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:384231-384334:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376815-376968:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:349939-350017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:347367-347538:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345095-345158:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343972-344014:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:343231-343441:-1:exon

UIMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: UIMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRCA1-A complex subunit RAP80 isoform X1
translation: MPRRKKKVKEASESQNLEKKGTETTSSVSVKRKRRLEDAFIVISDSDGEEPKEENGLQKAKTKQSNRAKCLAKRKIAQMTEEEQFALALKMSEQEAREVNSQEEEEEELLRKAIAESLNSCRPSDASATRSRPLATGPSSQSHQEKTTDSETTEGIWQLVPPSLFKGSHISQGNEAEEREEPWDHTENTEEEPVSGSSGSWDQSSQPVFENENVKCFDRCTGHLAEHTQCGKPQESTGRGCAFLKASQGRGDTFRHCLPTPSDAKGLQDIGGTVHYFWGIPFCPAGIDPNQYTKVILCQLEVYQKSLKMAQRQLFKKKGFGEPVLPRPPSLIQNECGQGDQASEKNEGISEDKRNEDKEERQESRASVWHSKPKDFQESPVRSLKEKLLLEEEPTTSHGQSSQGLFVEETSEEGNSVPASQSVAALTSKRSSVLTPESSAEEITVCPETQLSSPEILDPEREVSPGNRETSDEVRIIMADKEVANKGDAKKEVSISTFSSSTRVSCPLCDQGFPPTKIERHAMYCNGLKEQDTVLTRRQKEAKNKSDSGTAAQTSLDIDKNEKCYLCKSMIPLREYQCHVDSCLHLARGDHGDGPEESGRACSTVEGKWQQRLRNPKEKSHSEGRLLSLLEHSEYKTADAEIKTKSSETGAFRAPSLGVEEAGCSRQMQSSLTHLDLHESPIKSFVSISEATDCLVDFKKQLTVRPGSRTRTKAGRGRRRKS
SIO_010081: UIMC1
subclass of: SO_0000673
so part of: UIMC1
location: complement(join(343231..343441,343972..344014,345095..345158,347367..347538,349939..350017,376815..376968,384231..384334,387514..387590,389607..389671,396675..397411,397714..397819,398528..398652,408029..408113,414901..415047))
location: region:343231-415047:-1
so has part: feature:414901-415047:-1:exon
so has part: feature:408029-408113:-1:exon
so has part: feature:398528-398652:-1:exon
so has part: feature:397714-397819:-1:exon
so has part: feature:396675-397411:-1:exon
so has part: feature:389607-389671:-1:exon
so has part: feature:387514-387590:-1:exon
so has part: feature:384231-384334:-1:exon
so has part: feature:376815-376968:-1:exon
so has part: feature:349939-350017:-1:exon
so has part: feature:347367-347538:-1:exon
so has part: feature:345095-345158:-1:exon
so has part: feature:343972-344014:-1:exon
so has part: feature:343231-343441:-1:exon

XP_012642751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414901-415047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408029-408113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398528-398652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:397714-397819:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:396675-397411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389607-389671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387514-387590:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:384231-384334:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376815-376968:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:349939-350017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:347367-347538:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345095-345158:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343972-344014:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:343231-343441:-1:exon

UIMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: UIMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRCA1-A complex subunit RAP80 isoform X1
translation: MPRRKKKVKEASESQNLEKKGTETTSSVSVKRKRRLEDAFIVISDSDGEEPKEENGLQKAKTKQSNRAKCLAKRKIAQMTEEEQFALALKMSEQEAREVNSQEEEEEELLRKAIAESLNSCRPSDASATRSRPLATGPSSQSHQEKTTDSETTEGIWQLVPPSLFKGSHISQGNEAEEREEPWDHTENTEEEPVSGSSGSWDQSSQPVFENENVKCFDRCTGHLAEHTQCGKPQESTGRGCAFLKASQGRGDTFRHCLPTPSDAKGLQDIGGTVHYFWGIPFCPAGIDPNQYTKVILCQLEVYQKSLKMAQRQLFKKKGFGEPVLPRPPSLIQNECGQGDQASEKNEGISEDKRNEDKEERQESRASVWHSKPKDFQESPVRSLKEKLLLEEEPTTSHGQSSQGLFVEETSEEGNSVPASQSVAALTSKRSSVLTPESSAEEITVCPETQLSSPEILDPEREVSPGNRETSDEVRIIMADKEVANKGDAKKEVSISTFSSSTRVSCPLCDQGFPPTKIERHAMYCNGLKEQDTVLTRRQKEAKNKSDSGTAAQTSLDIDKNEKCYLCKSMIPLREYQCHVDSCLHLARGDHGDGPEESGRACSTVEGKWQQRLRNPKEKSHSEGRLLSLLEHSEYKTADAEIKTKSSETGAFRAPSLGVEEAGCSRQMQSSLTHLDLHESPIKSFVSISEATDCLVDFKKQLTVRPGSRTRTKAGRGRRRKS
SIO_010081: UIMC1
subclass of: SO_0000673
so part of: UIMC1
location: complement(join(343231..343441,343972..344014,345095..345158,347367..347538,349939..350017,376815..376968,384231..384334,387514..387590,389607..389671,396675..397411,397714..397819,398528..398652,408029..408113,414901..415047))
location: region:343231-415047:-1
so has part: feature:414901-415047:-1:exon
so has part: feature:408029-408113:-1:exon
so has part: feature:398528-398652:-1:exon
so has part: feature:397714-397819:-1:exon
so has part: feature:396675-397411:-1:exon
so has part: feature:389607-389671:-1:exon
so has part: feature:387514-387590:-1:exon
so has part: feature:384231-384334:-1:exon
so has part: feature:376815-376968:-1:exon
so has part: feature:349939-350017:-1:exon
so has part: feature:347367-347538:-1:exon
so has part: feature:345095-345158:-1:exon
so has part: feature:343972-344014:-1:exon
so has part: feature:343231-343441:-1:exon

XP_012642752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414901-415047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408029-408113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398528-398652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:397714-397819:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:396675-397411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389607-389671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387514-387590:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:384231-384334:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376815-376968:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:349939-350017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:347367-347538:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345095-345158:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343972-344014:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:343231-343441:-1:exon

UIMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: UIMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRCA1-A complex subunit RAP80 isoform X1
translation: MPRRKKKVKEASESQNLEKKGTETTSSVSVKRKRRLEDAFIVISDSDGEEPKEENGLQKAKTKQSNRAKCLAKRKIAQMTEEEQFALALKMSEQEAREVNSQEEEEEELLRKAIAESLNSCRPSDASATRSRPLATGPSSQSHQEKTTDSETTEGIWQLVPPSLFKGSHISQGNEAEEREEPWDHTENTEEEPVSGSSGSWDQSSQPVFENENVKCFDRCTGHLAEHTQCGKPQESTGRGCAFLKASQGRGDTFRHCLPTPSDAKGLQDIGGTVHYFWGIPFCPAGIDPNQYTKVILCQLEVYQKSLKMAQRQLFKKKGFGEPVLPRPPSLIQNECGQGDQASEKNEGISEDKRNEDKEERQESRASVWHSKPKDFQESPVRSLKEKLLLEEEPTTSHGQSSQGLFVEETSEEGNSVPASQSVAALTSKRSSVLTPESSAEEITVCPETQLSSPEILDPEREVSPGNRETSDEVRIIMADKEVANKGDAKKEVSISTFSSSTRVSCPLCDQGFPPTKIERHAMYCNGLKEQDTVLTRRQKEAKNKSDSGTAAQTSLDIDKNEKCYLCKSMIPLREYQCHVDSCLHLARGDHGDGPEESGRACSTVEGKWQQRLRNPKEKSHSEGRLLSLLEHSEYKTADAEIKTKSSETGAFRAPSLGVEEAGCSRQMQSSLTHLDLHESPIKSFVSISEATDCLVDFKKQLTVRPGSRTRTKAGRGRRRKS
SIO_010081: UIMC1
subclass of: SO_0000673
so part of: UIMC1
location: complement(join(343231..343441,343972..344014,345095..345158,347367..347538,349939..350017,376815..376968,384231..384334,387514..387590,389607..389671,396675..397411,397714..397819,398528..398652,408029..408113,414901..415047))
location: region:343231-415047:-1
so has part: feature:414901-415047:-1:exon
so has part: feature:408029-408113:-1:exon
so has part: feature:398528-398652:-1:exon
so has part: feature:397714-397819:-1:exon
so has part: feature:396675-397411:-1:exon
so has part: feature:389607-389671:-1:exon
so has part: feature:387514-387590:-1:exon
so has part: feature:384231-384334:-1:exon
so has part: feature:376815-376968:-1:exon
so has part: feature:349939-350017:-1:exon
so has part: feature:347367-347538:-1:exon
so has part: feature:345095-345158:-1:exon
so has part: feature:343972-344014:-1:exon
so has part: feature:343231-343441:-1:exon

XP_012642753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414901-415047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:408029-408113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398528-398652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:397714-397819:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:396675-397411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389607-389671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387514-387590:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:384231-384334:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376815-376968:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:349939-350017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:347367-347538:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345095-345158:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343972-344014:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:343231-343441:-1:exon

LOC105883847
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105883847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 405242..406354
location: region:405242-406354:1
so has part: feature:405242-406354:1:exon

105883847
type: Gene
SIO_000068: ncbigene

position:405242:1
position: 405242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406354:1
position: 406354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405242-406354:1:exon

LOC105883847
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: LOC105883847
product: nucleosome assembly protein 1-like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 14 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_001159949.2
SIO_010081: LOC105883847
so part of: LOC105883847
location: 405242..406354
location: region:405242-406354:1
so has part: feature:405242-406354:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405242-406354:1:exon

LOC105883846
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105883846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 420161..421557
location: region:420161-421557:1
so has part: feature:420161-421557:1:exon

105883846
type: Gene
SIO_000068: ncbigene

position:420161:1
position: 420161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421557:1
position: 421557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420161-421557:1:exon

LOC105883846
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105883846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105883846
subclass of: SO_0000673
so part of: LOC105883846
location: 420161..421557
location: region:420161-421557:1
so has part: feature:420161-421557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420161-421557:1:exon

ZNF346
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: ZNF346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 441873..487289
location: region:441873-487289:1
so has part: feature:441873-487289:1:exon
subclass of: SO_0000010

105883844
type: Gene
SIO_000068: ncbigene

position:441873:1
position: 441873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487289:1
position: 487289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441873-487289:1:exon

ZNF346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787309.2
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(441873..442345,443264..443341,459196..459299,459851..459943,462096..462240,466415..466648,478456..478601,485259..487289)
location: region:441873-487289:1
so has part: feature:441873-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466415-466648:1:exon
so has part: feature:478456-478601:1:exon
so has part: feature:485259-487289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

position:442345:1
position: 442345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

position:443264:1
position: 443264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443341:1
position: 443341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

position:459196:1
position: 459196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459299:1
position: 459299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

position:459851:1
position: 459851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459943:1
position: 459943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

position:462096:1
position: 462096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462240:1
position: 462240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:466415-466648:1:exon

position:466415:1
position: 466415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466648:1
position: 466648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:478456-478601:1:exon

position:478456:1
position: 478456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478601:1
position: 478601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:485259-487289:1:exon

position:485259:1
position: 485259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF346
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159946.2
SIO_010081: ZNF346
so part of: ZNF346
location: join(441873..442345,443264..443341,459196..459299,459851..459943,462096..462240,466415..466648,476455..476548,478456..478601,485259..487273)
location: region:441873-487273:1
so has part: feature:441873-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466415-466648:1:exon
so has part: feature:476455-476548:1:exon
so has part: feature:478456-478601:1:exon
so has part: feature:485259-487273:1:exon

position:487273:1
position: 487273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466415-466648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476455-476548:1:exon

position:476455:1
position: 476455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476548:1
position: 476548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:478456-478601:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:485259-487273:1:exon

ZNF346
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159948.2
SIO_010081: ZNF346
so part of: ZNF346
location: join(441873..442345,443264..443341,459196..459299,459851..459943,462096..462240,466415..466648,476455..476548,478456..478601,485259..485883,486790..487262)
location: region:441873-487262:1
so has part: feature:441873-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466415-466648:1:exon
so has part: feature:476455-476548:1:exon
so has part: feature:478456-478601:1:exon
so has part: feature:485259-485883:1:exon
so has part: feature:486790-487262:1:exon

position:487262:1
position: 487262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466415-466648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476455-476548:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478456-478601:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:485259-485883:1:exon

position:485883:1
position: 485883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:486790-487262:1:exon

position:486790:1
position: 486790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787303.1
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(441873..442345,443264..443341,459196..459299,459851..459943,462096..462240,466415..466648,478456..478601,479504..480585)
location: region:441873-480585:1
so has part: feature:441873-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466415-466648:1:exon
so has part: feature:478456-478601:1:exon
so has part: feature:479504-480585:1:exon

position:480585:1
position: 480585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466415-466648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478456-478601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:479504-480585:1:exon

position:479504:1
position: 479504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787304.1
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(441873..442345,443264..443341,459196..459299,459851..459943,462096..462240,466463..466648,478456..478601,479504..480585)
location: region:441873-480585:1
so has part: feature:441873-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466463-466648:1:exon
so has part: feature:478456-478601:1:exon
so has part: feature:479504-480585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466463-466648:1:exon

position:466463:1
position: 466463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:478456-478601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:479504-480585:1:exon

ZNF346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787305.1
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(441873..442345,459196..459299,459851..459943,462096..462240,466415..466648,478456..478601,479504..480585)
location: region:441873-480585:1
so has part: feature:441873-442345:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466415-466648:1:exon
so has part: feature:478456-478601:1:exon
so has part: feature:479504-480585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466415-466648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478456-478601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479504-480585:1:exon

ZNF346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787306.1
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(441873..442345,459196..459299,459851..459943,462096..462240,466463..466648,478456..478601,479504..480585)
location: region:441873-480585:1
so has part: feature:441873-442345:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466463-466648:1:exon
so has part: feature:478456-478601:1:exon
so has part: feature:479504-480585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466463-466648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478456-478601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479504-480585:1:exon

ZNF346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787307.1
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(441873..442345,443264..443341,459196..459299,459851..459943,462096..462240,466415..466648,478456..479597)
location: region:441873-479597:1
so has part: feature:441873-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466415-466648:1:exon
so has part: feature:478456-479597:1:exon

position:479597:1
position: 479597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466415-466648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478456-479597:1:exon

ZNF346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787310.1
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(441873..442345,443264..443341,459196..459299,459851..459943,462096..462240,466463..466648,478456..479597)
location: region:441873-479597:1
so has part: feature:441873-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466463-466648:1:exon
so has part: feature:478456-479597:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466463-466648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478456-479597:1:exon

ZNF346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 61 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012787313.1
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(441873..442345,459196..459299,459851..459943,462096..462240,466463..466648,476455..476548,478456..479597)
location: region:441873-479597:1
so has part: feature:441873-442345:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466463-466648:1:exon
so has part: feature:476455-476548:1:exon
so has part: feature:478456-479597:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466463-466648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476455-476548:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478456-479597:1:exon

ZNF346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012787314.1
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(441873..442345,459196..459299,459851..459943,462096..462240,476455..476548,478456..479597)
location: region:441873-479597:1
so has part: feature:441873-442345:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:476455-476548:1:exon
so has part: feature:478456-479597:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476455-476548:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478456-479597:1:exon

ZNF346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012787315.1
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(441873..442345,459196..459299,459851..459943,478456..479597)
location: region:441873-479597:1
so has part: feature:441873-442345:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:478456-479597:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:478456-479597:1:exon

ZNF346
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159947.1
SIO_010081: ZNF346
so part of: ZNF346
location: join(441873..442345,443264..443341,459196..459299,459851..459943,462096..462240,466415..466648,476455..476548,478456..478601,479504..479588)
location: region:441873-479588:1
so has part: feature:441873-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466415-466648:1:exon
so has part: feature:476455-476548:1:exon
so has part: feature:478456-478601:1:exon
so has part: feature:479504-479588:1:exon

position:479588:1
position: 479588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466415-466648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476455-476548:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478456-478601:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:479504-479588:1:exon

ZNF346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787308.2
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(441873..442345,443264..443341,459196..459299,459851..459943,462096..462240,466415..466648,476455..476548,478456..478645)
location: region:441873-478645:1
so has part: feature:441873-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466415-466648:1:exon
so has part: feature:476455-476548:1:exon
so has part: feature:478456-478645:1:exon

position:478645:1
position: 478645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466415-466648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476455-476548:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478456-478645:1:exon

ZNF346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787311.2
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(441873..442345,443264..443341,459196..459299,459851..459943,462096..462240,466463..466648,476455..476548,478456..478645)
location: region:441873-478645:1
so has part: feature:441873-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466463-466648:1:exon
so has part: feature:476455-476548:1:exon
so has part: feature:478456-478645:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466463-466648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476455-476548:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478456-478645:1:exon

ZNF346
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF346
product: zinc finger protein 346, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012787312.2
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(441873..442345,459196..459299,459851..459943,462096..462240,466415..466648,476455..476548,478456..478645)
location: region:441873-478645:1
so has part: feature:441873-442345:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466415-466648:1:exon
so has part: feature:476455-476548:1:exon
so has part: feature:478456-478645:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441873-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466415-466648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476455-476548:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478456-478645:1:exon

ZNF346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X7
translation: MEYSALGTVETADDRGAGPRHSSEEREGREPDGVRFDRERARSLWEAVSGAQPVGREEVLCRASYSTPTYVYKNYNWAFVLILSVEHMIEKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALSKRLTNPFLVASTLALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADSAVTDFSGHQKQRHRPWARFQCKGNPFRKSQPPWKTRDVSTQHPLFDQPRTSFLRLEPQNAEET
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(442171..442345,443264..443341,459196..459299,459851..459943,462096..462240,466415..466648,478456..478601,485259..485285)
location: region:442171-485285:1
so has part: feature:442171-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466415-466648:1:exon
so has part: feature:478456-478601:1:exon
so has part: feature:485259-485285:1:exon

XP_012642763.1
type: Protein
SIO_000068: ncbiprotein

position:442171:1
position: 442171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485285:1
position: 485285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442171-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466415-466648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478456-478601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485259-485285:1:exon

ZNF346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X1
translation: MEYSALGTVETADDRGAGPRHSSEEREGREPDGVRFDRERARSLWEAVSGAQPVGREEVLCRASYSTPTYVYKNYNWAFVLILSVEHMIEKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALSKRLTNPFLVASTLALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADSAVTDFSGHQKQRHRPWARFQCKGNPFRKSQPPWKTRDVSTQHPLFDQPRTSFLRLMIPQYQGAGWYPRERNGELIQVSTLRKQMFPRPQTQSSLIQLRLTAWDFTGSGFFLVVSSKNSRECHHQRLLFIGSKKPLAALMASFPYSPSPHLAMPLRIVCVRACVCLCSVSWSLKHPNKEFLPRASLQLNRPGAVLPLDLVRLS
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(442171..442345,443264..443341,459196..459299,459851..459943,462096..462240,466415..466648,478456..478601,479504..479947)
location: region:442171-479947:1
so has part: feature:442171-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466415-466648:1:exon
so has part: feature:478456-478601:1:exon
so has part: feature:479504-479947:1:exon

XP_012642757.1
type: Protein
SIO_000068: ncbiprotein

position:479947:1
position: 479947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442171-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466415-466648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478456-478601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:479504-479947:1:exon

ZNF346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X2
translation: MEYSALGTVETADDRGAGPRHSSEEREGREPDGVRFDRERARSLWEAVSGAQPVGREEVLCRASYSTPTYVYKNYNWAFVLILSVEHMIEKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADSAVTDFSGHQKQRHRPWARFQCKGNPFRKSQPPWKTRDVSTQHPLFDQPRTSFLRLMIPQYQGAGWYPRERNGELIQVSTLRKQMFPRPQTQSSLIQLRLTAWDFTGSGFFLVVSSKNSRECHHQRLLFIGSKKPLAALMASFPYSPSPHLAMPLRIVCVRACVCLCSVSWSLKHPNKEFLPRASLQLNRPGAVLPLDLVRLS
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(442171..442345,443264..443341,459196..459299,459851..459943,462096..462240,466463..466648,478456..478601,479504..479947)
location: region:442171-479947:1
so has part: feature:442171-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466463-466648:1:exon
so has part: feature:478456-478601:1:exon
so has part: feature:479504-479947:1:exon

XP_012642758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442171-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466463-466648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478456-478601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:479504-479947:1:exon

ZNF346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X3
translation: MEYSALGTVETADDRGAGPRHSSEEREGREPDGVRFDRERARSLWEAVSGAQPVGREEVEHMIEKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALSKRLTNPFLVASTLALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADSAVTDFSGHQKQRHRPWARFQCKGNPFRKSQPPWKTRDVSTQHPLFDQPRTSFLRLMIPQYQGAGWYPRERNGELIQVSTLRKQMFPRPQTQSSLIQLRLTAWDFTGSGFFLVVSSKNSRECHHQRLLFIGSKKPLAALMASFPYSPSPHLAMPLRIVCVRACVCLCSVSWSLKHPNKEFLPRASLQLNRPGAVLPLDLVRLS
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(442171..442345,459196..459299,459851..459943,462096..462240,466415..466648,478456..478601,479504..479947)
location: region:442171-479947:1
so has part: feature:442171-442345:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466415-466648:1:exon
so has part: feature:478456-478601:1:exon
so has part: feature:479504-479947:1:exon

XP_012642759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442171-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466415-466648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478456-478601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479504-479947:1:exon

ZNF346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X4
translation: MEYSALGTVETADDRGAGPRHSSEEREGREPDGVRFDRERARSLWEAVSGAQPVGREEVEHMIEKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADSAVTDFSGHQKQRHRPWARFQCKGNPFRKSQPPWKTRDVSTQHPLFDQPRTSFLRLMIPQYQGAGWYPRERNGELIQVSTLRKQMFPRPQTQSSLIQLRLTAWDFTGSGFFLVVSSKNSRECHHQRLLFIGSKKPLAALMASFPYSPSPHLAMPLRIVCVRACVCLCSVSWSLKHPNKEFLPRASLQLNRPGAVLPLDLVRLS
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(442171..442345,459196..459299,459851..459943,462096..462240,466463..466648,478456..478601,479504..479947)
location: region:442171-479947:1
so has part: feature:442171-442345:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466463-466648:1:exon
so has part: feature:478456-478601:1:exon
so has part: feature:479504-479947:1:exon

XP_012642760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442171-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466463-466648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478456-478601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479504-479947:1:exon

ZNF346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X13
translation: MEYSALGTVETADDRGAGPRHSSEEREGREPDGVRFDRERARSLWEAVSGAQPVGREEVEHMIEKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQVTKNNGIVPGPDSSAKATPSERVSLLGRLEMSLPSTPCLTSHEPASCDWSALGSLFLLSYTRRILRPEARLGHRQPLIGPG
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(442171..442345,459196..459299,459851..459943,478456..478701)
location: region:442171-478701:1
so has part: feature:442171-442345:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:478456-478701:1:exon

XP_012642769.1
type: Protein
SIO_000068: ncbiprotein

position:478701:1
position: 478701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442171-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:478456-478701:1:exon

ZNF346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X5
translation: MEYSALGTVETADDRGAGPRHSSEEREGREPDGVRFDRERARSLWEAVSGAQPVGREEVLCRASYSTPTYVYKNYNWAFVLILSVEHMIEKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALSKRLTNPFLVASTLALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADSAVTDFSGHQKQRHRPWARFQCKGNPFRKSQPPWKTRDVSTQHPLFDQPRTSFLRLVSPWLPLPPFLYQENT
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(442171..442345,443264..443341,459196..459299,459851..459943,462096..462240,466415..466648,478456..478652)
location: region:442171-478652:1
so has part: feature:442171-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466415-466648:1:exon
so has part: feature:478456-478652:1:exon

XP_012642761.1
type: Protein
SIO_000068: ncbiprotein

position:478652:1
position: 478652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442171-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466415-466648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478456-478652:1:exon

ZNF346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X8
translation: MEYSALGTVETADDRGAGPRHSSEEREGREPDGVRFDRERARSLWEAVSGAQPVGREEVLCRASYSTPTYVYKNYNWAFVLILSVEHMIEKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADSAVTDFSGHQKQRHRPWARFQCKGNPFRKSQPPWKTRDVSTQHPLFDQPRTSFLRLVSPWLPLPPFLYQENT
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(442171..442345,443264..443341,459196..459299,459851..459943,462096..462240,466463..466648,478456..478652)
location: region:442171-478652:1
so has part: feature:442171-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466463-466648:1:exon
so has part: feature:478456-478652:1:exon

XP_012642764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442171-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466463-466648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478456-478652:1:exon

ZNF346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X6
translation: MEYSALGTVETADDRGAGPRHSSEEREGREPDGVRFDRERARSLWEAVSGAQPVGREEVLCRASYSTPTYVYKNYNWAFVLILSVEHMIEKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALSKRLTNPFLVASTLALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADSAVTDFSAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTTASSLGQIPVQRQPLQKESASLED
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(442171..442345,443264..443341,459196..459299,459851..459943,462096..462240,466415..466648,476455..476548,478456..478543)
location: region:442171-478543:1
so has part: feature:442171-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466415-466648:1:exon
so has part: feature:476455-476548:1:exon
so has part: feature:478456-478543:1:exon

XP_012642762.1
type: Protein
SIO_000068: ncbiprotein

position:478543:1
position: 478543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442171-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466415-466648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476455-476548:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478456-478543:1:exon

ZNF346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X9
translation: MEYSALGTVETADDRGAGPRHSSEEREGREPDGVRFDRERARSLWEAVSGAQPVGREEVLCRASYSTPTYVYKNYNWAFVLILSVEHMIEKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADSAVTDFSAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTTASSLGQIPVQRQPLQKESASLED
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(442171..442345,443264..443341,459196..459299,459851..459943,462096..462240,466463..466648,476455..476548,478456..478543)
location: region:442171-478543:1
so has part: feature:442171-442345:1:exon
so has part: feature:443264-443341:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466463-466648:1:exon
so has part: feature:476455-476548:1:exon
so has part: feature:478456-478543:1:exon

XP_012642765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442171-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443264-443341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466463-466648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476455-476548:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478456-478543:1:exon

ZNF346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X10
translation: MEYSALGTVETADDRGAGPRHSSEEREGREPDGVRFDRERARSLWEAVSGAQPVGREEVEHMIEKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALSKRLTNPFLVASTLALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADSAVTDFSAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTTASSLGQIPVQRQPLQKESASLED
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(442171..442345,459196..459299,459851..459943,462096..462240,466415..466648,476455..476548,478456..478543)
location: region:442171-478543:1
so has part: feature:442171-442345:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466415-466648:1:exon
so has part: feature:476455-476548:1:exon
so has part: feature:478456-478543:1:exon

XP_012642766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442171-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466415-466648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476455-476548:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478456-478543:1:exon

ZNF346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X11
translation: MEYSALGTVETADDRGAGPRHSSEEREGREPDGVRFDRERARSLWEAVSGAQPVGREEVEHMIEKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADSAVTDFSAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTTASSLGQIPVQRQPLQKESASLED
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(442171..442345,459196..459299,459851..459943,462096..462240,466463..466648,476455..476548,478456..478543)
location: region:442171-478543:1
so has part: feature:442171-442345:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:466463-466648:1:exon
so has part: feature:476455-476548:1:exon
so has part: feature:478456-478543:1:exon

XP_012642767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442171-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466463-466648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476455-476548:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478456-478543:1:exon

ZNF346
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 346 isoform X12
translation: MEYSALGTVETADDRGAGPRHSSEEREGREPDGVRFDRERARSLWEAVSGAQPVGREEVEHMIEKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTTASSLGQIPVQRQPLQKESASLED
SIO_010081: ZNF346
subclass of: SO_0000673
so part of: ZNF346
location: join(442171..442345,459196..459299,459851..459943,462096..462240,476455..476548,478456..478543)
location: region:442171-478543:1
so has part: feature:442171-442345:1:exon
so has part: feature:459196-459299:1:exon
so has part: feature:459851-459943:1:exon
so has part: feature:462096-462240:1:exon
so has part: feature:476455-476548:1:exon
so has part: feature:478456-478543:1:exon

XP_012642768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442171-442345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459196-459299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459851-459943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:462096-462240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476455-476548:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478456-478543:1:exon

FGFR4
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: FGFR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 492255..502760
location: region:492255-502760:1
so has part: feature:492255-502760:1:exon
subclass of: SO_0000010

105883822
type: Gene
SIO_000068: ncbigene

position:492255:1
position: 492255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502760:1
position: 502760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492255-502760:1:exon

FGFR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FGFR4
product: fibroblast growth factor receptor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 70 ESTs, 77 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284810.1
SIO_010081: FGFR4
subclass of: SO_0000673
so part of: FGFR4
location: join(492255..492337,494254..494459,495121..495384,495478..495546,495675..495955,497317..497607,497737..497875,498179..498369,498445..498590,498689..498810,500013..500123,500203..500393,500710..500832,500927..500997,501263..501400,501862..501967,502051..502760)
location: region:492255-502760:1
so has part: feature:492255-492337:1:exon
so has part: feature:494254-494459:1:exon
so has part: feature:495121-495384:1:exon
so has part: feature:495478-495546:1:exon
so has part: feature:495675-495955:1:exon
so has part: feature:497317-497607:1:exon
so has part: feature:497737-497875:1:exon
so has part: feature:498179-498369:1:exon
so has part: feature:498445-498590:1:exon
so has part: feature:498689-498810:1:exon
so has part: feature:500013-500123:1:exon
so has part: feature:500203-500393:1:exon
so has part: feature:500710-500832:1:exon
so has part: feature:500927-500997:1:exon
so has part: feature:501263-501400:1:exon
so has part: feature:501862-501967:1:exon
so has part: feature:502051-502760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492255-492337:1:exon

position:492337:1
position: 492337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:494254-494459:1:exon

position:494254:1
position: 494254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494459:1
position: 494459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:495121-495384:1:exon

position:495121:1
position: 495121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495384:1
position: 495384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:495478-495546:1:exon

position:495478:1
position: 495478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495546:1
position: 495546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:495675-495955:1:exon

position:495675:1
position: 495675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495955:1
position: 495955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:497317-497607:1:exon

position:497317:1
position: 497317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497607:1
position: 497607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:497737-497875:1:exon

position:497737:1
position: 497737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497875:1
position: 497875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:498179-498369:1:exon

position:498179:1
position: 498179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498369:1
position: 498369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:498445-498590:1:exon

position:498445:1
position: 498445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498590:1
position: 498590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:498689-498810:1:exon

position:498689:1
position: 498689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498810:1
position: 498810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:500013-500123:1:exon

position:500013:1
position: 500013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500123:1
position: 500123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:500203-500393:1:exon

position:500203:1
position: 500203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500393:1
position: 500393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:500710-500832:1:exon

position:500710:1
position: 500710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500832:1
position: 500832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:500927-500997:1:exon

position:500927:1
position: 500927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500997:1
position: 500997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:501263-501400:1:exon

position:501263:1
position: 501263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501400:1
position: 501400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:501862-501967:1:exon

position:501862:1
position: 501862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501967:1
position: 501967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:502051-502760:1:exon

position:502051:1
position: 502051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGFR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FGFR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor receptor 4
translation: MWLLLALPGVLLVVPGAPALSLEASEEAELEPCLAPSLEQQEQELTVALGQPVRLCCGRAERGGHWYKEGSRLAPAGRVRGWRGRLEIASFLPEDAGHYLCLARGSMIVLHNLTLVVDDSLTSSNDNEDPKTQNGHTYPQQAPYWTHPQRMEKKLHAVPAGNTVKFRCPAAGNPSPTIRWLKDGQAFHGENRIGGIRVSLWVSGPSAPRSSSPHPSLHTYTLSPPATVCEEAGLSEGPSLGLGRGWGQVSREPLWVPPLSADSLAWPPERSPHRPILQAGLPANTTAVAGSDVELLCKVYSDAQPHIQWLKHVVINGSSLGADGFPYVQVLKTADINSSEVEVLYLRNVSAEDAGEYTCLAGNSIGLSYQSAWLTVLPEEDLTWTAAAEARYTDVILYASGSLAFVVLLLLAGLYRGQALHGRYPRQPAAVQKLSRFPLARQFSLESGSSGKSSSSLVRGVRLSSSGPPLLASLVSLDLPLDPLWEFPRDRLVLGKPLGEGCFGQVVRAEAFGMDPARPDQASTVAVKMLKDNASDKDLADLVSEMEVMKLIGRHKNIINLLGVCTQEGPLYVIVECAAKGNLREFLRARRPPGPDLSPDGPRSSEGPLSFPALVSCAYQVARGMQYLESRKCIHRDLAARNVLVTEDSVMKIADFGLARGVHHIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILLWEIFTLGGSPYPGIPVEELFSLLREGHRMDRPPHCPPELYGLMRECWHAAPSQRPTFKQLVEALDKVLLAVSEEYLDFRLTFGPCSPSGGDASSTCSSSDSVFSHDPLPLGPSPFPFPGAQT
SIO_010081: FGFR4
subclass of: SO_0000673
so part of: FGFR4
location: join(494369..494459,495121..495384,495478..495546,495675..495955,497317..497607,497737..497875,498179..498369,498445..498590,498689..498810,500013..500123,500203..500393,500710..500832,500927..500997,501263..501400,501862..501967,502051..502197)
location: region:494369-502197:1
so has part: feature:494369-494459:1:exon
so has part: feature:495121-495384:1:exon
so has part: feature:495478-495546:1:exon
so has part: feature:495675-495955:1:exon
so has part: feature:497317-497607:1:exon
so has part: feature:497737-497875:1:exon
so has part: feature:498179-498369:1:exon
so has part: feature:498445-498590:1:exon
so has part: feature:498689-498810:1:exon
so has part: feature:500013-500123:1:exon
so has part: feature:500203-500393:1:exon
so has part: feature:500710-500832:1:exon
so has part: feature:500927-500997:1:exon
so has part: feature:501263-501400:1:exon
so has part: feature:501862-501967:1:exon
so has part: feature:502051-502197:1:exon

XP_020140399.1
type: Protein
SIO_000068: ncbiprotein

position:494369:1
position: 494369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502197:1
position: 502197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494369-494459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:495121-495384:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495478-495546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:495675-495955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497317-497607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497737-497875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:498179-498369:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498445-498590:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498689-498810:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:500013-500123:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:500203-500393:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:500710-500832:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:500927-500997:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:501263-501400:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:501862-501967:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:502051-502197:1:exon

NSD1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: NSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 532087..738128
location: region:532087-738128:1
so has part: feature:532087-738128:1:exon
subclass of: SO_0000010

105883848
type: Gene
SIO_000068: ncbigene

position:532087:1
position: 532087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738128:1
position: 738128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532087-738128:1:exon

NSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NSD1
product: nuclear receptor binding SET domain protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 181 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012787320.2
SIO_010081: NSD1
subclass of: SO_0000673
so part of: NSD1
location: join(532087..532110,534571..535514,606250..606385,618263..618435,621240..623802,643838..643962,645930..646200,664302..664411,670439..670514,673384..673502,674433..674576,681207..681330,695749..695949,698999..699178,706424..706580,708185..708390,713373..713485,718805..719074,720425..720541,721878..722019,727084..727190,729002..729206,731682..738128)
location: region:532087-738128:1
so has part: feature:532087-532110:1:exon
so has part: feature:534571-535514:1:exon
so has part: feature:606250-606385:1:exon
so has part: feature:618263-618435:1:exon
so has part: feature:621240-623802:1:exon
so has part: feature:643838-643962:1:exon
so has part: feature:645930-646200:1:exon
so has part: feature:664302-664411:1:exon
so has part: feature:670439-670514:1:exon
so has part: feature:673384-673502:1:exon
so has part: feature:674433-674576:1:exon
so has part: feature:681207-681330:1:exon
so has part: feature:695749-695949:1:exon
so has part: feature:698999-699178:1:exon
so has part: feature:706424-706580:1:exon
so has part: feature:708185-708390:1:exon
so has part: feature:713373-713485:1:exon
so has part: feature:718805-719074:1:exon
so has part: feature:720425-720541:1:exon
so has part: feature:721878-722019:1:exon
so has part: feature:727084-727190:1:exon
so has part: feature:729002-729206:1:exon
so has part: feature:731682-738128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:532087-532110:1:exon

position:532110:1
position: 532110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534571-535514:1:exon

position:534571:1
position: 534571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535514:1
position: 535514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:606250-606385:1:exon

position:606250:1
position: 606250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606385:1
position: 606385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:618263-618435:1:exon

position:618263:1
position: 618263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618435:1
position: 618435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:621240-623802:1:exon

position:621240:1
position: 621240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623802:1
position: 623802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:643838-643962:1:exon

position:643838:1
position: 643838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643962:1
position: 643962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:645930-646200:1:exon

position:645930:1
position: 645930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646200:1
position: 646200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:664302-664411:1:exon

position:664302:1
position: 664302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664411:1
position: 664411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:670439-670514:1:exon

position:670439:1
position: 670439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670514:1
position: 670514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:673384-673502:1:exon

position:673384:1
position: 673384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673502:1
position: 673502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:674433-674576:1:exon

position:674433:1
position: 674433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674576:1
position: 674576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:681207-681330:1:exon

position:681207:1
position: 681207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681330:1
position: 681330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:695749-695949:1:exon

position:695749:1
position: 695749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695949:1
position: 695949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:698999-699178:1:exon

position:698999:1
position: 698999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699178:1
position: 699178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:706424-706580:1:exon

position:706424:1
position: 706424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706580:1
position: 706580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:708185-708390:1:exon

position:708185:1
position: 708185
reference: sequence
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position:708390:1
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reference: sequence
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urn:…
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SIO_000628: feature:713373-713485:1:exon

position:713373:1
position: 713373
reference: sequence
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position:713485:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:718805-719074:1:exon

position:718805:1
position: 718805
reference: sequence
type: ForwardStrandPosition
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position:719074:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:720425-720541:1:exon

position:720425:1
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reference: sequence
type: ForwardStrandPosition
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position:720541:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:721878-722019:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:722019:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:727084-727190:1:exon

position:727084:1
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reference: sequence
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position:727190:1
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urn:…
SIO_000300: 22
SIO_000628: feature:729002-729206:1:exon

position:729002:1
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reference: sequence
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position:729206:1
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urn:…
SIO_000300: 23
SIO_000628: feature:731682-738128:1:exon

position:731682:1
position: 731682
reference: sequence
type: ForwardStrandPosition
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NSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NSD1
product: nuclear receptor binding SET domain protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 182 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_012787318.2
SIO_010081: NSD1
subclass of: SO_0000673
so part of: NSD1
location: join(532420..532628,534571..535514,606250..606385,618263..618435,621240..623802,643838..643962,645930..646200,664302..664411,670439..670514,673384..673502,674433..674576,681207..681330,695749..695949,698999..699178,706424..706580,708185..708390,713373..713485,718805..719074,720425..720541,721878..722019,727084..727190,729002..729206,731682..738128)
location: region:532420-738128:1
so has part: feature:532420-532628:1:exon
so has part: feature:534571-535514:1:exon
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position:532420:1
position: 532420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532420-532628:1:exon

position:532628:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 11
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SIO_000300: 12
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SIO_000300: 13
SIO_000628: feature:695749-695949:1:exon

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SIO_000300: 14
SIO_000628: feature:698999-699178:1:exon

urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:708185-708390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:713373-713485:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:718805-719074:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:720425-720541:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:721878-722019:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:727084-727190:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:729002-729206:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:731682-738128:1:exon

NSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NSD1
product: nuclear receptor binding SET domain protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 183 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_012787324.2
SIO_010081: NSD1
subclass of: SO_0000673
so part of: NSD1
location: join(532426..532628,534571..534684,535425..535514,606250..606385,618263..618435,621240..623802,643838..643962,645930..646200,664302..664411,670439..670514,673384..673502,674433..674576,681207..681330,695749..695949,698999..699178,706424..706580,708185..708390,713373..713485,718805..719074,720425..720541,721878..722019,727084..727190,729002..729206,731682..738128)
location: region:532426-738128:1
so has part: feature:532426-532628:1:exon
so has part: feature:534571-534684:1:exon
so has part: feature:535425-535514:1:exon
so has part: feature:606250-606385:1:exon
so has part: feature:618263-618435:1:exon
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so has part: feature:727084-727190:1:exon
so has part: feature:729002-729206:1:exon
so has part: feature:731682-738128:1:exon

position:532426:1
position: 532426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532426-532628:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:534571-534684:1:exon

position:534684:1
position: 534684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:535425-535514:1:exon

position:535425:1
position: 535425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:606250-606385:1:exon

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SIO_000300: 5
SIO_000628: feature:618263-618435:1:exon

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SIO_000300: 6
SIO_000628: feature:621240-623802:1:exon

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SIO_000300: 7
SIO_000628: feature:643838-643962:1:exon

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SIO_000300: 8
SIO_000628: feature:645930-646200:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664302-664411:1:exon

urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:674433-674576:1:exon

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SIO_000300: 13
SIO_000628: feature:681207-681330:1:exon

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SIO_000300: 14
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SIO_000300: 15
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urn:…
SIO_000300: 16
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SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:713373-713485:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:718805-719074:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:720425-720541:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:721878-722019:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:727084-727190:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:729002-729206:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:731682-738128:1:exon

NSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NSD1
product: nuclear receptor binding SET domain protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 184 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_012787317.1
SIO_010081: NSD1
subclass of: SO_0000673
so part of: NSD1
location: join(533249..533436,534571..535514,606250..606385,618263..618435,621240..623802,643838..643962,645930..646200,664302..664411,670439..670514,673384..673502,674433..674576,681207..681330,695749..695949,698999..699178,706424..706580,708185..708390,713373..713485,718805..719074,720425..720541,721878..722019,727084..727190,729002..729206,731682..738128)
location: region:533249-738128:1
so has part: feature:533249-533436:1:exon
so has part: feature:534571-535514:1:exon
so has part: feature:606250-606385:1:exon
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so has part: feature:721878-722019:1:exon
so has part: feature:727084-727190:1:exon
so has part: feature:729002-729206:1:exon
so has part: feature:731682-738128:1:exon

position:533249:1
position: 533249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533249-533436:1:exon

position:533436:1
position: 533436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534571-535514:1:exon

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SIO_000300: 3
SIO_000628: feature:606250-606385:1:exon

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SIO_000300: 4
SIO_000628: feature:618263-618435:1:exon

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SIO_000300: 5
SIO_000628: feature:621240-623802:1:exon

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SIO_000300: 6
SIO_000628: feature:643838-643962:1:exon

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SIO_000300: 7
SIO_000628: feature:645930-646200:1:exon

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SIO_000300: 8
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SIO_000300: 11
SIO_000628: feature:674433-674576:1:exon

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SIO_000300: 12
SIO_000628: feature:681207-681330:1:exon

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SIO_000300: 13
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SIO_000300: 14
SIO_000628: feature:698999-699178:1:exon

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SIO_000300: 15
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SIO_000300: 16
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SIO_000300: 17
SIO_000628: feature:713373-713485:1:exon

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SIO_000300: 18
SIO_000628: feature:718805-719074:1:exon

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SIO_000300: 19
SIO_000628: feature:720425-720541:1:exon

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SIO_000300: 20
SIO_000628: feature:721878-722019:1:exon

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SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:729002-729206:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:731682-738128:1:exon

NSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NSD1
product: nuclear receptor binding SET domain protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 181 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012787319.1
SIO_010081: NSD1
subclass of: SO_0000673
so part of: NSD1
location: join(533249..533382,534571..535514,606250..606385,618263..618435,621240..623802,643838..643962,645930..646200,664302..664411,670439..670514,673384..673502,674433..674576,681207..681330,695749..695949,698999..699178,706424..706580,708185..708390,713373..713485,718805..719074,720425..720541,721878..722019,727084..727190,729002..729206,731682..738128)
location: region:533249-738128:1
so has part: feature:533249-533382:1:exon
so has part: feature:534571-535514:1:exon
so has part: feature:606250-606385:1:exon
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so has part: feature:727084-727190:1:exon
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so has part: feature:731682-738128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533249-533382:1:exon

position:533382:1
position: 533382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534571-535514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:606250-606385:1:exon

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SIO_000300: 4
SIO_000628: feature:618263-618435:1:exon

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SIO_000300: 5
SIO_000628: feature:621240-623802:1:exon

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SIO_000300: 8
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SIO_000300: 10
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SIO_000300: 11
SIO_000628: feature:674433-674576:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:681207-681330:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:695749-695949:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:698999-699178:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:706424-706580:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:708185-708390:1:exon

urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:718805-719074:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:720425-720541:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:721878-722019:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:727084-727190:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:729002-729206:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:731682-738128:1:exon

NSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NSD1
product: nuclear receptor binding SET domain protein 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 182 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012787325.1
SIO_010081: NSD1
subclass of: SO_0000673
so part of: NSD1
location: join(533650..533717,534571..534684,535425..535514,606250..606385,618263..618435,621240..623802,643838..643962,645930..646200,664302..664411,670439..670514,673384..673502,674433..674576,681207..681330,695749..695949,698999..699178,706424..706580,708185..708390,713373..713485,718805..719074,720425..720541,721878..722019,727084..727190,729002..729206,731682..738128)
location: region:533650-738128:1
so has part: feature:533650-533717:1:exon
so has part: feature:534571-534684:1:exon
so has part: feature:535425-535514:1:exon
so has part: feature:606250-606385:1:exon
so has part: feature:618263-618435:1:exon
so has part: feature:621240-623802:1:exon
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so has part: feature:698999-699178:1:exon
so has part: feature:706424-706580:1:exon
so has part: feature:708185-708390:1:exon
so has part: feature:713373-713485:1:exon
so has part: feature:718805-719074:1:exon
so has part: feature:720425-720541:1:exon
so has part: feature:721878-722019:1:exon
so has part: feature:727084-727190:1:exon
so has part: feature:729002-729206:1:exon
so has part: feature:731682-738128:1:exon

position:533650:1
position: 533650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533650-533717:1:exon

position:533717:1
position: 533717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534571-534684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535425-535514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:606250-606385:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618263-618435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621240-623802:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:643838-643962:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:645930-646200:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664302-664411:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:670439-670514:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:673384-673502:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:674433-674576:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:681207-681330:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:695749-695949:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:698999-699178:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:706424-706580:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:708185-708390:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:713373-713485:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:718805-719074:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:720425-720541:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:721878-722019:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:727084-727190:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:729002-729206:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:731682-738128:1:exon

NSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NSD1
product: nuclear receptor binding SET domain protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 181 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012787321.2
SIO_010081: NSD1
subclass of: SO_0000673
so part of: NSD1
location: join(533693..533717,534571..535514,606250..606385,618263..618435,621240..623802,643838..643962,645930..646200,664302..664411,670439..670514,673384..673502,674433..674576,681207..681330,695749..695949,698999..699178,706424..706580,708185..708390,713373..713485,718805..719074,720425..720541,721878..722019,727084..727190,729002..729206,731682..738128)
location: region:533693-738128:1
so has part: feature:533693-533717:1:exon
so has part: feature:534571-535514:1:exon
so has part: feature:606250-606385:1:exon
so has part: feature:618263-618435:1:exon
so has part: feature:621240-623802:1:exon
so has part: feature:643838-643962:1:exon
so has part: feature:645930-646200:1:exon
so has part: feature:664302-664411:1:exon
so has part: feature:670439-670514:1:exon
so has part: feature:673384-673502:1:exon
so has part: feature:674433-674576:1:exon
so has part: feature:681207-681330:1:exon
so has part: feature:695749-695949:1:exon
so has part: feature:698999-699178:1:exon
so has part: feature:706424-706580:1:exon
so has part: feature:708185-708390:1:exon
so has part: feature:713373-713485:1:exon
so has part: feature:718805-719074:1:exon
so has part: feature:720425-720541:1:exon
so has part: feature:721878-722019:1:exon
so has part: feature:727084-727190:1:exon
so has part: feature:729002-729206:1:exon
so has part: feature:731682-738128:1:exon

position:533693:1
position: 533693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533693-533717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:534571-535514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:606250-606385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:618263-618435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621240-623802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:643838-643962:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:645930-646200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:664302-664411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:670439-670514:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:673384-673502:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:674433-674576:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:681207-681330:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:695749-695949:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:698999-699178:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:706424-706580:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:708185-708390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:713373-713485:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:718805-719074:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:720425-720541:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:721878-722019:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:727084-727190:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:729002-729206:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:731682-738128:1:exon

NSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific isoform X1
translation: MDQTCELPRRNCLLPFSNPVNLDAPEDKDNPFGNGQSNFSEPLNGCTMQLSTASGTSQNAYGQDSPSCYIPLRRLQDLASMINVEYLNGSADGSESFQDPEKSDSRAQSPVVCTSLSPGGPTALAMKQEPSCNNSPELQVKVTKTIKNGFLHFENFTCVDDTDVDSEMDPEQPVTEDESIEEIYEETQTNATCNYEPKSENGVKMAMGSEQDSTPESRHGAVKSPFLPLAPQTETQKNKQRSEVDGSSEKAALLPTPFSLGDTNITIEEQLNSINLSFQDDPDSSTSTLGNMLELPGTSSSSTSQELPFCQPKKKSTPLKYEVGDLIWAKFKRRPWWPCRICSDPLINTHSKMKVSNRRPYRQYYVEAFGDPSEKAWVAGKAIVMFEGRHQFEELPVLRRRGKQKEKGYRHKVPQKILSKWEASVGLAEQYDVPKGSKNRKCVTSSIKLDSEEDMPFEDCTNDPESEHDILLNGCLKSLAFDSEHSADEKEKPCAKSRARKSSDNPKRTSVKKGLVQFEAHKEERGGKISENLGLNFISGDVSDKQASNELSRIASSLTGSSTAPGGFLFSSCGKNTAKKEFETSNCDSLLGLPEGALISKHSGEKKKPQRGLVCSSKVQLCYIGAGDEEKRSDSISICTTSDDGSSDLDPIEHSSESDNSVLEITDAFDRKENMLSMQKNEKIKYSRYPATNSRVKTKQKSLIANSHTDHLVDCTKTAEPRTETSAINLSDLTVSTLIHKSQSDFRNDGLPPKFNMSSSISSENSLMKGGTTNQALLHLKSKQPKFRNMKYKHKENPVIVEPPVTNEDCSLKYCSSDAKSSPLASMSKSGKVDGLKLLNNMHEKTRDSSDIETAVVKHVLSELKELSYRSLGEDVSDSGTSKPTKPLLFSSASSQNHLPIEPDYKFSTLLMMLKDMHDSKTKEQRLMTAPNLVSYRSPSRGDCSTSSPVGASKVLVSGGSTHKSEKNGDGTQDSANPSPSRGDGALSGELSASLPGFVSDRRDLPVSGKSRSNCVTRRNCGRSKPSSKLRDAFSAQMGKNTVNRKALKTERRRKLSRLPAVSLEPALQGDRESGDSLRGGIEGAGKEEPLQLVGHLTSEGAADLSDVHFHNKVKQPDPDTIPKKGPGLENRKGQELDSELNSENDEHSGVNQAVPKKRWQRLNQRRAKPRKRTNRFREKENSEGAFGILLPSDPVQERRDEFLEHRTPPSTNIPEDAQTDPNRAGHLDSVGSQLNICDKSSTSLGDMEKEPGIPSLTPQAELPEPAVRSEKKRLRKPSKWLLEYTEEYDQIFAPKKKQKKVQEQVHKVSSRCEEESLLARCRTSAQNKQVDENSLISTKEEPPVLEREAPFLEGPLAQSELGGGHAELPQLTLSVPVAPEVSPRPALESEELLVKTPGNYESKRQRKPTKKLLESNDLDPGFMPKKGDLGLSKKCYEAGHLENGITESGATSHLKEFGGGTAKIFDKPRKRKRQRHITAKAQCKKVRNDDSSKETPSSEGELMTHRTTGSPKETVEEGVEQDPGMPASKRMQGERGGGAALKENVCQNCEKVGELLLCEAQCCGAFHLECLGLTEMPRGKFICNECRTGIHTCFVCKENGEDVKRCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHICITCHAANPASVSASKGRLMRCVRCPVAYHANDFCLAAGSKILASNSIICPNHFTPRRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNIDIPEGNWYCNDCKAGKKPHYREIVWVKVGRYRWWPAEICHPRAVPSNIDKMRHDVGEFPVLFFGSNDYLWTHQARVFPYMEGDVSSKDKMGKGVDGTYKKALQEAAARFEELKAQKELRQLQEDRKNDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSECINRMLLYECHPTVCPAGGRCQNQCFSKRQYPDVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYML…
SIO_010081: NSD1
subclass of: SO_0000673
so part of: NSD1
location: join(534588..535514,606250..606385,618263..618435,621240..623802,643838..643962,645930..646200,664302..664411,670439..670514,673384..673502,674433..674576,681207..681330,695749..695949,698999..699178,706424..706580,708185..708390,713373..713485,718805..719074,720425..720541,721878..722019,727084..727190,729002..729206,731682..733309)
location: region:534588-733309:1
so has part: feature:534588-535514:1:exon
so has part: feature:606250-606385:1:exon
so has part: feature:618263-618435:1:exon
so has part: feature:621240-623802:1:exon
so has part: feature:643838-643962:1:exon
so has part: feature:645930-646200:1:exon
so has part: feature:664302-664411:1:exon
so has part: feature:670439-670514:1:exon
so has part: feature:673384-673502:1:exon
so has part: feature:674433-674576:1:exon
so has part: feature:681207-681330:1:exon
so has part: feature:695749-695949:1:exon
so has part: feature:698999-699178:1:exon
so has part: feature:706424-706580:1:exon
so has part: feature:708185-708390:1:exon
so has part: feature:713373-713485:1:exon
so has part: feature:718805-719074:1:exon
so has part: feature:720425-720541:1:exon
so has part: feature:721878-722019:1:exon
so has part: feature:727084-727190:1:exon
so has part: feature:729002-729206:1:exon
so has part: feature:731682-733309:1:exon

XP_012642771.1
type: Protein
SIO_000068: ncbiprotein

position:534588:1
position: 534588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733309:1
position: 733309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534588-535514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606250-606385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618263-618435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621240-623802:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:643838-643962:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645930-646200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664302-664411:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670439-670514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:673384-673502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:674433-674576:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:681207-681330:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:695749-695949:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:698999-699178:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:706424-706580:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:708185-708390:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:713373-713485:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:718805-719074:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:720425-720541:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:721878-722019:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:727084-727190:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:729002-729206:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:731682-733309:1:exon

NSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific isoform X1
translation: MDQTCELPRRNCLLPFSNPVNLDAPEDKDNPFGNGQSNFSEPLNGCTMQLSTASGTSQNAYGQDSPSCYIPLRRLQDLASMINVEYLNGSADGSESFQDPEKSDSRAQSPVVCTSLSPGGPTALAMKQEPSCNNSPELQVKVTKTIKNGFLHFENFTCVDDTDVDSEMDPEQPVTEDESIEEIYEETQTNATCNYEPKSENGVKMAMGSEQDSTPESRHGAVKSPFLPLAPQTETQKNKQRSEVDGSSEKAALLPTPFSLGDTNITIEEQLNSINLSFQDDPDSSTSTLGNMLELPGTSSSSTSQELPFCQPKKKSTPLKYEVGDLIWAKFKRRPWWPCRICSDPLINTHSKMKVSNRRPYRQYYVEAFGDPSEKAWVAGKAIVMFEGRHQFEELPVLRRRGKQKEKGYRHKVPQKILSKWEASVGLAEQYDVPKGSKNRKCVTSSIKLDSEEDMPFEDCTNDPESEHDILLNGCLKSLAFDSEHSADEKEKPCAKSRARKSSDNPKRTSVKKGLVQFEAHKEERGGKISENLGLNFISGDVSDKQASNELSRIASSLTGSSTAPGGFLFSSCGKNTAKKEFETSNCDSLLGLPEGALISKHSGEKKKPQRGLVCSSKVQLCYIGAGDEEKRSDSISICTTSDDGSSDLDPIEHSSESDNSVLEITDAFDRKENMLSMQKNEKIKYSRYPATNSRVKTKQKSLIANSHTDHLVDCTKTAEPRTETSAINLSDLTVSTLIHKSQSDFRNDGLPPKFNMSSSISSENSLMKGGTTNQALLHLKSKQPKFRNMKYKHKENPVIVEPPVTNEDCSLKYCSSDAKSSPLASMSKSGKVDGLKLLNNMHEKTRDSSDIETAVVKHVLSELKELSYRSLGEDVSDSGTSKPTKPLLFSSASSQNHLPIEPDYKFSTLLMMLKDMHDSKTKEQRLMTAPNLVSYRSPSRGDCSTSSPVGASKVLVSGGSTHKSEKNGDGTQDSANPSPSRGDGALSGELSASLPGFVSDRRDLPVSGKSRSNCVTRRNCGRSKPSSKLRDAFSAQMGKNTVNRKALKTERRRKLSRLPAVSLEPALQGDRESGDSLRGGIEGAGKEEPLQLVGHLTSEGAADLSDVHFHNKVKQPDPDTIPKKGPGLENRKGQELDSELNSENDEHSGVNQAVPKKRWQRLNQRRAKPRKRTNRFREKENSEGAFGILLPSDPVQERRDEFLEHRTPPSTNIPEDAQTDPNRAGHLDSVGSQLNICDKSSTSLGDMEKEPGIPSLTPQAELPEPAVRSEKKRLRKPSKWLLEYTEEYDQIFAPKKKQKKVQEQVHKVSSRCEEESLLARCRTSAQNKQVDENSLISTKEEPPVLEREAPFLEGPLAQSELGGGHAELPQLTLSVPVAPEVSPRPALESEELLVKTPGNYESKRQRKPTKKLLESNDLDPGFMPKKGDLGLSKKCYEAGHLENGITESGATSHLKEFGGGTAKIFDKPRKRKRQRHITAKAQCKKVRNDDSSKETPSSEGELMTHRTTGSPKETVEEGVEQDPGMPASKRMQGERGGGAALKENVCQNCEKVGELLLCEAQCCGAFHLECLGLTEMPRGKFICNECRTGIHTCFVCKENGEDVKRCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHICITCHAANPASVSASKGRLMRCVRCPVAYHANDFCLAAGSKILASNSIICPNHFTPRRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNIDIPEGNWYCNDCKAGKKPHYREIVWVKVGRYRWWPAEICHPRAVPSNIDKMRHDVGEFPVLFFGSNDYLWTHQARVFPYMEGDVSSKDKMGKGVDGTYKKALQEAAARFEELKAQKELRQLQEDRKNDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSECINRMLLYECHPTVCPAGGRCQNQCFSKRQYPDVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYML…
SIO_010081: NSD1
subclass of: SO_0000673
so part of: NSD1
location: join(534588..535514,606250..606385,618263..618435,621240..623802,643838..643962,645930..646200,664302..664411,670439..670514,673384..673502,674433..674576,681207..681330,695749..695949,698999..699178,706424..706580,708185..708390,713373..713485,718805..719074,720425..720541,721878..722019,727084..727190,729002..729206,731682..733309)
location: region:534588-733309:1
so has part: feature:534588-535514:1:exon
so has part: feature:606250-606385:1:exon
so has part: feature:618263-618435:1:exon
so has part: feature:621240-623802:1:exon
so has part: feature:643838-643962:1:exon
so has part: feature:645930-646200:1:exon
so has part: feature:664302-664411:1:exon
so has part: feature:670439-670514:1:exon
so has part: feature:673384-673502:1:exon
so has part: feature:674433-674576:1:exon
so has part: feature:681207-681330:1:exon
so has part: feature:695749-695949:1:exon
so has part: feature:698999-699178:1:exon
so has part: feature:706424-706580:1:exon
so has part: feature:708185-708390:1:exon
so has part: feature:713373-713485:1:exon
so has part: feature:718805-719074:1:exon
so has part: feature:720425-720541:1:exon
so has part: feature:721878-722019:1:exon
so has part: feature:727084-727190:1:exon
so has part: feature:729002-729206:1:exon
so has part: feature:731682-733309:1:exon

XP_012642772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534588-535514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606250-606385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618263-618435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621240-623802:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:643838-643962:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645930-646200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664302-664411:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670439-670514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:673384-673502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:674433-674576:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:681207-681330:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:695749-695949:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:698999-699178:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:706424-706580:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:708185-708390:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:713373-713485:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:718805-719074:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:720425-720541:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:721878-722019:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:727084-727190:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:729002-729206:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:731682-733309:1:exon

NSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific isoform X1
translation: MDQTCELPRRNCLLPFSNPVNLDAPEDKDNPFGNGQSNFSEPLNGCTMQLSTASGTSQNAYGQDSPSCYIPLRRLQDLASMINVEYLNGSADGSESFQDPEKSDSRAQSPVVCTSLSPGGPTALAMKQEPSCNNSPELQVKVTKTIKNGFLHFENFTCVDDTDVDSEMDPEQPVTEDESIEEIYEETQTNATCNYEPKSENGVKMAMGSEQDSTPESRHGAVKSPFLPLAPQTETQKNKQRSEVDGSSEKAALLPTPFSLGDTNITIEEQLNSINLSFQDDPDSSTSTLGNMLELPGTSSSSTSQELPFCQPKKKSTPLKYEVGDLIWAKFKRRPWWPCRICSDPLINTHSKMKVSNRRPYRQYYVEAFGDPSEKAWVAGKAIVMFEGRHQFEELPVLRRRGKQKEKGYRHKVPQKILSKWEASVGLAEQYDVPKGSKNRKCVTSSIKLDSEEDMPFEDCTNDPESEHDILLNGCLKSLAFDSEHSADEKEKPCAKSRARKSSDNPKRTSVKKGLVQFEAHKEERGGKISENLGLNFISGDVSDKQASNELSRIASSLTGSSTAPGGFLFSSCGKNTAKKEFETSNCDSLLGLPEGALISKHSGEKKKPQRGLVCSSKVQLCYIGAGDEEKRSDSISICTTSDDGSSDLDPIEHSSESDNSVLEITDAFDRKENMLSMQKNEKIKYSRYPATNSRVKTKQKSLIANSHTDHLVDCTKTAEPRTETSAINLSDLTVSTLIHKSQSDFRNDGLPPKFNMSSSISSENSLMKGGTTNQALLHLKSKQPKFRNMKYKHKENPVIVEPPVTNEDCSLKYCSSDAKSSPLASMSKSGKVDGLKLLNNMHEKTRDSSDIETAVVKHVLSELKELSYRSLGEDVSDSGTSKPTKPLLFSSASSQNHLPIEPDYKFSTLLMMLKDMHDSKTKEQRLMTAPNLVSYRSPSRGDCSTSSPVGASKVLVSGGSTHKSEKNGDGTQDSANPSPSRGDGALSGELSASLPGFVSDRRDLPVSGKSRSNCVTRRNCGRSKPSSKLRDAFSAQMGKNTVNRKALKTERRRKLSRLPAVSLEPALQGDRESGDSLRGGIEGAGKEEPLQLVGHLTSEGAADLSDVHFHNKVKQPDPDTIPKKGPGLENRKGQELDSELNSENDEHSGVNQAVPKKRWQRLNQRRAKPRKRTNRFREKENSEGAFGILLPSDPVQERRDEFLEHRTPPSTNIPEDAQTDPNRAGHLDSVGSQLNICDKSSTSLGDMEKEPGIPSLTPQAELPEPAVRSEKKRLRKPSKWLLEYTEEYDQIFAPKKKQKKVQEQVHKVSSRCEEESLLARCRTSAQNKQVDENSLISTKEEPPVLEREAPFLEGPLAQSELGGGHAELPQLTLSVPVAPEVSPRPALESEELLVKTPGNYESKRQRKPTKKLLESNDLDPGFMPKKGDLGLSKKCYEAGHLENGITESGATSHLKEFGGGTAKIFDKPRKRKRQRHITAKAQCKKVRNDDSSKETPSSEGELMTHRTTGSPKETVEEGVEQDPGMPASKRMQGERGGGAALKENVCQNCEKVGELLLCEAQCCGAFHLECLGLTEMPRGKFICNECRTGIHTCFVCKENGEDVKRCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHICITCHAANPASVSASKGRLMRCVRCPVAYHANDFCLAAGSKILASNSIICPNHFTPRRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNIDIPEGNWYCNDCKAGKKPHYREIVWVKVGRYRWWPAEICHPRAVPSNIDKMRHDVGEFPVLFFGSNDYLWTHQARVFPYMEGDVSSKDKMGKGVDGTYKKALQEAAARFEELKAQKELRQLQEDRKNDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSECINRMLLYECHPTVCPAGGRCQNQCFSKRQYPDVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYML…
SIO_010081: NSD1
subclass of: SO_0000673
so part of: NSD1
location: join(534588..535514,606250..606385,618263..618435,621240..623802,643838..643962,645930..646200,664302..664411,670439..670514,673384..673502,674433..674576,681207..681330,695749..695949,698999..699178,706424..706580,708185..708390,713373..713485,718805..719074,720425..720541,721878..722019,727084..727190,729002..729206,731682..733309)
location: region:534588-733309:1
so has part: feature:534588-535514:1:exon
so has part: feature:606250-606385:1:exon
so has part: feature:618263-618435:1:exon
so has part: feature:621240-623802:1:exon
so has part: feature:643838-643962:1:exon
so has part: feature:645930-646200:1:exon
so has part: feature:664302-664411:1:exon
so has part: feature:670439-670514:1:exon
so has part: feature:673384-673502:1:exon
so has part: feature:674433-674576:1:exon
so has part: feature:681207-681330:1:exon
so has part: feature:695749-695949:1:exon
so has part: feature:698999-699178:1:exon
so has part: feature:706424-706580:1:exon
so has part: feature:708185-708390:1:exon
so has part: feature:713373-713485:1:exon
so has part: feature:718805-719074:1:exon
so has part: feature:720425-720541:1:exon
so has part: feature:721878-722019:1:exon
so has part: feature:727084-727190:1:exon
so has part: feature:729002-729206:1:exon
so has part: feature:731682-733309:1:exon

XP_012642773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534588-535514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606250-606385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618263-618435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621240-623802:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:643838-643962:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645930-646200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664302-664411:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670439-670514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:673384-673502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:674433-674576:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:681207-681330:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:695749-695949:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:698999-699178:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:706424-706580:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:708185-708390:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:713373-713485:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:718805-719074:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:720425-720541:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:721878-722019:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:727084-727190:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:729002-729206:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:731682-733309:1:exon

NSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific isoform X1
translation: MDQTCELPRRNCLLPFSNPVNLDAPEDKDNPFGNGQSNFSEPLNGCTMQLSTASGTSQNAYGQDSPSCYIPLRRLQDLASMINVEYLNGSADGSESFQDPEKSDSRAQSPVVCTSLSPGGPTALAMKQEPSCNNSPELQVKVTKTIKNGFLHFENFTCVDDTDVDSEMDPEQPVTEDESIEEIYEETQTNATCNYEPKSENGVKMAMGSEQDSTPESRHGAVKSPFLPLAPQTETQKNKQRSEVDGSSEKAALLPTPFSLGDTNITIEEQLNSINLSFQDDPDSSTSTLGNMLELPGTSSSSTSQELPFCQPKKKSTPLKYEVGDLIWAKFKRRPWWPCRICSDPLINTHSKMKVSNRRPYRQYYVEAFGDPSEKAWVAGKAIVMFEGRHQFEELPVLRRRGKQKEKGYRHKVPQKILSKWEASVGLAEQYDVPKGSKNRKCVTSSIKLDSEEDMPFEDCTNDPESEHDILLNGCLKSLAFDSEHSADEKEKPCAKSRARKSSDNPKRTSVKKGLVQFEAHKEERGGKISENLGLNFISGDVSDKQASNELSRIASSLTGSSTAPGGFLFSSCGKNTAKKEFETSNCDSLLGLPEGALISKHSGEKKKPQRGLVCSSKVQLCYIGAGDEEKRSDSISICTTSDDGSSDLDPIEHSSESDNSVLEITDAFDRKENMLSMQKNEKIKYSRYPATNSRVKTKQKSLIANSHTDHLVDCTKTAEPRTETSAINLSDLTVSTLIHKSQSDFRNDGLPPKFNMSSSISSENSLMKGGTTNQALLHLKSKQPKFRNMKYKHKENPVIVEPPVTNEDCSLKYCSSDAKSSPLASMSKSGKVDGLKLLNNMHEKTRDSSDIETAVVKHVLSELKELSYRSLGEDVSDSGTSKPTKPLLFSSASSQNHLPIEPDYKFSTLLMMLKDMHDSKTKEQRLMTAPNLVSYRSPSRGDCSTSSPVGASKVLVSGGSTHKSEKNGDGTQDSANPSPSRGDGALSGELSASLPGFVSDRRDLPVSGKSRSNCVTRRNCGRSKPSSKLRDAFSAQMGKNTVNRKALKTERRRKLSRLPAVSLEPALQGDRESGDSLRGGIEGAGKEEPLQLVGHLTSEGAADLSDVHFHNKVKQPDPDTIPKKGPGLENRKGQELDSELNSENDEHSGVNQAVPKKRWQRLNQRRAKPRKRTNRFREKENSEGAFGILLPSDPVQERRDEFLEHRTPPSTNIPEDAQTDPNRAGHLDSVGSQLNICDKSSTSLGDMEKEPGIPSLTPQAELPEPAVRSEKKRLRKPSKWLLEYTEEYDQIFAPKKKQKKVQEQVHKVSSRCEEESLLARCRTSAQNKQVDENSLISTKEEPPVLEREAPFLEGPLAQSELGGGHAELPQLTLSVPVAPEVSPRPALESEELLVKTPGNYESKRQRKPTKKLLESNDLDPGFMPKKGDLGLSKKCYEAGHLENGITESGATSHLKEFGGGTAKIFDKPRKRKRQRHITAKAQCKKVRNDDSSKETPSSEGELMTHRTTGSPKETVEEGVEQDPGMPASKRMQGERGGGAALKENVCQNCEKVGELLLCEAQCCGAFHLECLGLTEMPRGKFICNECRTGIHTCFVCKENGEDVKRCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHICITCHAANPASVSASKGRLMRCVRCPVAYHANDFCLAAGSKILASNSIICPNHFTPRRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNIDIPEGNWYCNDCKAGKKPHYREIVWVKVGRYRWWPAEICHPRAVPSNIDKMRHDVGEFPVLFFGSNDYLWTHQARVFPYMEGDVSSKDKMGKGVDGTYKKALQEAAARFEELKAQKELRQLQEDRKNDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSECINRMLLYECHPTVCPAGGRCQNQCFSKRQYPDVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYML…
SIO_010081: NSD1
subclass of: SO_0000673
so part of: NSD1
location: join(534588..535514,606250..606385,618263..618435,621240..623802,643838..643962,645930..646200,664302..664411,670439..670514,673384..673502,674433..674576,681207..681330,695749..695949,698999..699178,706424..706580,708185..708390,713373..713485,718805..719074,720425..720541,721878..722019,727084..727190,729002..729206,731682..733309)
location: region:534588-733309:1
so has part: feature:534588-535514:1:exon
so has part: feature:606250-606385:1:exon
so has part: feature:618263-618435:1:exon
so has part: feature:621240-623802:1:exon
so has part: feature:643838-643962:1:exon
so has part: feature:645930-646200:1:exon
so has part: feature:664302-664411:1:exon
so has part: feature:670439-670514:1:exon
so has part: feature:673384-673502:1:exon
so has part: feature:674433-674576:1:exon
so has part: feature:681207-681330:1:exon
so has part: feature:695749-695949:1:exon
so has part: feature:698999-699178:1:exon
so has part: feature:706424-706580:1:exon
so has part: feature:708185-708390:1:exon
so has part: feature:713373-713485:1:exon
so has part: feature:718805-719074:1:exon
so has part: feature:720425-720541:1:exon
so has part: feature:721878-722019:1:exon
so has part: feature:727084-727190:1:exon
so has part: feature:729002-729206:1:exon
so has part: feature:731682-733309:1:exon

XP_012642774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534588-535514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606250-606385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618263-618435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621240-623802:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:643838-643962:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645930-646200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664302-664411:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670439-670514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:673384-673502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:674433-674576:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:681207-681330:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:695749-695949:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:698999-699178:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:706424-706580:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:708185-708390:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:713373-713485:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:718805-719074:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:720425-720541:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:721878-722019:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:727084-727190:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:729002-729206:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:731682-733309:1:exon

NSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific isoform X1
translation: MDQTCELPRRNCLLPFSNPVNLDAPEDKDNPFGNGQSNFSEPLNGCTMQLSTASGTSQNAYGQDSPSCYIPLRRLQDLASMINVEYLNGSADGSESFQDPEKSDSRAQSPVVCTSLSPGGPTALAMKQEPSCNNSPELQVKVTKTIKNGFLHFENFTCVDDTDVDSEMDPEQPVTEDESIEEIYEETQTNATCNYEPKSENGVKMAMGSEQDSTPESRHGAVKSPFLPLAPQTETQKNKQRSEVDGSSEKAALLPTPFSLGDTNITIEEQLNSINLSFQDDPDSSTSTLGNMLELPGTSSSSTSQELPFCQPKKKSTPLKYEVGDLIWAKFKRRPWWPCRICSDPLINTHSKMKVSNRRPYRQYYVEAFGDPSEKAWVAGKAIVMFEGRHQFEELPVLRRRGKQKEKGYRHKVPQKILSKWEASVGLAEQYDVPKGSKNRKCVTSSIKLDSEEDMPFEDCTNDPESEHDILLNGCLKSLAFDSEHSADEKEKPCAKSRARKSSDNPKRTSVKKGLVQFEAHKEERGGKISENLGLNFISGDVSDKQASNELSRIASSLTGSSTAPGGFLFSSCGKNTAKKEFETSNCDSLLGLPEGALISKHSGEKKKPQRGLVCSSKVQLCYIGAGDEEKRSDSISICTTSDDGSSDLDPIEHSSESDNSVLEITDAFDRKENMLSMQKNEKIKYSRYPATNSRVKTKQKSLIANSHTDHLVDCTKTAEPRTETSAINLSDLTVSTLIHKSQSDFRNDGLPPKFNMSSSISSENSLMKGGTTNQALLHLKSKQPKFRNMKYKHKENPVIVEPPVTNEDCSLKYCSSDAKSSPLASMSKSGKVDGLKLLNNMHEKTRDSSDIETAVVKHVLSELKELSYRSLGEDVSDSGTSKPTKPLLFSSASSQNHLPIEPDYKFSTLLMMLKDMHDSKTKEQRLMTAPNLVSYRSPSRGDCSTSSPVGASKVLVSGGSTHKSEKNGDGTQDSANPSPSRGDGALSGELSASLPGFVSDRRDLPVSGKSRSNCVTRRNCGRSKPSSKLRDAFSAQMGKNTVNRKALKTERRRKLSRLPAVSLEPALQGDRESGDSLRGGIEGAGKEEPLQLVGHLTSEGAADLSDVHFHNKVKQPDPDTIPKKGPGLENRKGQELDSELNSENDEHSGVNQAVPKKRWQRLNQRRAKPRKRTNRFREKENSEGAFGILLPSDPVQERRDEFLEHRTPPSTNIPEDAQTDPNRAGHLDSVGSQLNICDKSSTSLGDMEKEPGIPSLTPQAELPEPAVRSEKKRLRKPSKWLLEYTEEYDQIFAPKKKQKKVQEQVHKVSSRCEEESLLARCRTSAQNKQVDENSLISTKEEPPVLEREAPFLEGPLAQSELGGGHAELPQLTLSVPVAPEVSPRPALESEELLVKTPGNYESKRQRKPTKKLLESNDLDPGFMPKKGDLGLSKKCYEAGHLENGITESGATSHLKEFGGGTAKIFDKPRKRKRQRHITAKAQCKKVRNDDSSKETPSSEGELMTHRTTGSPKETVEEGVEQDPGMPASKRMQGERGGGAALKENVCQNCEKVGELLLCEAQCCGAFHLECLGLTEMPRGKFICNECRTGIHTCFVCKENGEDVKRCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHICITCHAANPASVSASKGRLMRCVRCPVAYHANDFCLAAGSKILASNSIICPNHFTPRRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNIDIPEGNWYCNDCKAGKKPHYREIVWVKVGRYRWWPAEICHPRAVPSNIDKMRHDVGEFPVLFFGSNDYLWTHQARVFPYMEGDVSSKDKMGKGVDGTYKKALQEAAARFEELKAQKELRQLQEDRKNDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSECINRMLLYECHPTVCPAGGRCQNQCFSKRQYPDVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYML…
SIO_010081: NSD1
subclass of: SO_0000673
so part of: NSD1
location: join(534588..535514,606250..606385,618263..618435,621240..623802,643838..643962,645930..646200,664302..664411,670439..670514,673384..673502,674433..674576,681207..681330,695749..695949,698999..699178,706424..706580,708185..708390,713373..713485,718805..719074,720425..720541,721878..722019,727084..727190,729002..729206,731682..733309)
location: region:534588-733309:1
so has part: feature:534588-535514:1:exon
so has part: feature:606250-606385:1:exon
so has part: feature:618263-618435:1:exon
so has part: feature:621240-623802:1:exon
so has part: feature:643838-643962:1:exon
so has part: feature:645930-646200:1:exon
so has part: feature:664302-664411:1:exon
so has part: feature:670439-670514:1:exon
so has part: feature:673384-673502:1:exon
so has part: feature:674433-674576:1:exon
so has part: feature:681207-681330:1:exon
so has part: feature:695749-695949:1:exon
so has part: feature:698999-699178:1:exon
so has part: feature:706424-706580:1:exon
so has part: feature:708185-708390:1:exon
so has part: feature:713373-713485:1:exon
so has part: feature:718805-719074:1:exon
so has part: feature:720425-720541:1:exon
so has part: feature:721878-722019:1:exon
so has part: feature:727084-727190:1:exon
so has part: feature:729002-729206:1:exon
so has part: feature:731682-733309:1:exon

XP_012642775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534588-535514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606250-606385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618263-618435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621240-623802:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:643838-643962:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645930-646200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664302-664411:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670439-670514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:673384-673502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:674433-674576:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:681207-681330:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:695749-695949:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:698999-699178:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:706424-706580:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:708185-708390:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:713373-713485:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:718805-719074:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:720425-720541:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:721878-722019:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:727084-727190:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:729002-729206:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:731682-733309:1:exon

NSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific isoform X2
translation: MPQKTRTTLSDDPDSSTSTLGNMLELPGTSSSSTSQELPFCQPKKKSTPLKYEVGDLIWAKFKRRPWWPCRICSDPLINTHSKMKVSNRRPYRQYYVEAFGDPSEKAWVAGKAIVMFEGRHQFEELPVLRRRGKQKEKGYRHKVPQKILSKWEASVGLAEQYDVPKGSKNRKCVTSSIKLDSEEDMPFEDCTNDPESEHDILLNGCLKSLAFDSEHSADEKEKPCAKSRARKSSDNPKRTSVKKGLVQFEAHKEERGGKISENLGLNFISGDVSDKQASNELSRIASSLTGSSTAPGGFLFSSCGKNTAKKEFETSNCDSLLGLPEGALISKHSGEKKKPQRGLVCSSKVQLCYIGAGDEEKRSDSISICTTSDDGSSDLDPIEHSSESDNSVLEITDAFDRKENMLSMQKNEKIKYSRYPATNSRVKTKQKSLIANSHTDHLVDCTKTAEPRTETSAINLSDLTVSTLIHKSQSDFRNDGLPPKFNMSSSISSENSLMKGGTTNQALLHLKSKQPKFRNMKYKHKENPVIVEPPVTNEDCSLKYCSSDAKSSPLASMSKSGKVDGLKLLNNMHEKTRDSSDIETAVVKHVLSELKELSYRSLGEDVSDSGTSKPTKPLLFSSASSQNHLPIEPDYKFSTLLMMLKDMHDSKTKEQRLMTAPNLVSYRSPSRGDCSTSSPVGASKVLVSGGSTHKSEKNGDGTQDSANPSPSRGDGALSGELSASLPGFVSDRRDLPVSGKSRSNCVTRRNCGRSKPSSKLRDAFSAQMGKNTVNRKALKTERRRKLSRLPAVSLEPALQGDRESGDSLRGGIEGAGKEEPLQLVGHLTSEGAADLSDVHFHNKVKQPDPDTIPKKGPGLENRKGQELDSELNSENDEHSGVNQAVPKKRWQRLNQRRAKPRKRTNRFREKENSEGAFGILLPSDPVQERRDEFLEHRTPPSTNIPEDAQTDPNRAGHLDSVGSQLNICDKSSTSLGDMEKEPGIPSLTPQAELPEPAVRSEKKRLRKPSKWLLEYTEEYDQIFAPKKKQKKVQEQVHKVSSRCEEESLLARCRTSAQNKQVDENSLISTKEEPPVLEREAPFLEGPLAQSELGGGHAELPQLTLSVPVAPEVSPRPALESEELLVKTPGNYESKRQRKPTKKLLESNDLDPGFMPKKGDLGLSKKCYEAGHLENGITESGATSHLKEFGGGTAKIFDKPRKRKRQRHITAKAQCKKVRNDDSSKETPSSEGELMTHRTTGSPKETVEEGVEQDPGMPASKRMQGERGGGAALKENVCQNCEKVGELLLCEAQCCGAFHLECLGLTEMPRGKFICNECRTGIHTCFVCKENGEDVKRCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHICITCHAANPASVSASKGRLMRCVRCPVAYHANDFCLAAGSKILASNSIICPNHFTPRRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNIDIPEGNWYCNDCKAGKKPHYREIVWVKVGRYRWWPAEICHPRAVPSNIDKMRHDVGEFPVLFFGSNDYLWTHQARVFPYMEGDVSSKDKMGKGVDGTYKKALQEAAARFEELKAQKELRQLQEDRKNDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSECINRMLLYECHPTVCPAGGRCQNQCFSKRQYPDVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLGVRPKNQPIATEEKSKKFKKKQQGKRRTQGEITKEREDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRPAGKWECPWHQCDICGKEAASFCEMCPSSFCKQHREGMLFISKLDGRLSCTEHDPCGPNPLEPGEIREYVPPPVPLPAGPSTHPAEPSSGVAAQGPKMSDKPPVDTNQTLSLSKKA…
SIO_010081: NSD1
subclass of: SO_0000673
so part of: NSD1
location: join(534655..534684,535425..535514,606250..606385,618263..618435,621240..623802,643838..643962,645930..646200,664302..664411,670439..670514,673384..673502,674433..674576,681207..681330,695749..695949,698999..699178,706424..706580,708185..708390,713373..713485,718805..719074,720425..720541,721878..722019,727084..727190,729002..729206,731682..733309)
location: region:534655-733309:1
so has part: feature:534655-534684:1:exon
so has part: feature:535425-535514:1:exon
so has part: feature:606250-606385:1:exon
so has part: feature:618263-618435:1:exon
so has part: feature:621240-623802:1:exon
so has part: feature:643838-643962:1:exon
so has part: feature:645930-646200:1:exon
so has part: feature:664302-664411:1:exon
so has part: feature:670439-670514:1:exon
so has part: feature:673384-673502:1:exon
so has part: feature:674433-674576:1:exon
so has part: feature:681207-681330:1:exon
so has part: feature:695749-695949:1:exon
so has part: feature:698999-699178:1:exon
so has part: feature:706424-706580:1:exon
so has part: feature:708185-708390:1:exon
so has part: feature:713373-713485:1:exon
so has part: feature:718805-719074:1:exon
so has part: feature:720425-720541:1:exon
so has part: feature:721878-722019:1:exon
so has part: feature:727084-727190:1:exon
so has part: feature:729002-729206:1:exon
so has part: feature:731682-733309:1:exon

XP_012642778.1
type: Protein
SIO_000068: ncbiprotein

position:534655:1
position: 534655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534655-534684:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535425-535514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:606250-606385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:618263-618435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621240-623802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:643838-643962:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:645930-646200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:664302-664411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:670439-670514:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:673384-673502:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:674433-674576:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:681207-681330:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:695749-695949:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:698999-699178:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:706424-706580:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:708185-708390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:713373-713485:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:718805-719074:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:720425-720541:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:721878-722019:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:727084-727190:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:729002-729206:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:731682-733309:1:exon

NSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific isoform X2
translation: MPQKTRTTLSDDPDSSTSTLGNMLELPGTSSSSTSQELPFCQPKKKSTPLKYEVGDLIWAKFKRRPWWPCRICSDPLINTHSKMKVSNRRPYRQYYVEAFGDPSEKAWVAGKAIVMFEGRHQFEELPVLRRRGKQKEKGYRHKVPQKILSKWEASVGLAEQYDVPKGSKNRKCVTSSIKLDSEEDMPFEDCTNDPESEHDILLNGCLKSLAFDSEHSADEKEKPCAKSRARKSSDNPKRTSVKKGLVQFEAHKEERGGKISENLGLNFISGDVSDKQASNELSRIASSLTGSSTAPGGFLFSSCGKNTAKKEFETSNCDSLLGLPEGALISKHSGEKKKPQRGLVCSSKVQLCYIGAGDEEKRSDSISICTTSDDGSSDLDPIEHSSESDNSVLEITDAFDRKENMLSMQKNEKIKYSRYPATNSRVKTKQKSLIANSHTDHLVDCTKTAEPRTETSAINLSDLTVSTLIHKSQSDFRNDGLPPKFNMSSSISSENSLMKGGTTNQALLHLKSKQPKFRNMKYKHKENPVIVEPPVTNEDCSLKYCSSDAKSSPLASMSKSGKVDGLKLLNNMHEKTRDSSDIETAVVKHVLSELKELSYRSLGEDVSDSGTSKPTKPLLFSSASSQNHLPIEPDYKFSTLLMMLKDMHDSKTKEQRLMTAPNLVSYRSPSRGDCSTSSPVGASKVLVSGGSTHKSEKNGDGTQDSANPSPSRGDGALSGELSASLPGFVSDRRDLPVSGKSRSNCVTRRNCGRSKPSSKLRDAFSAQMGKNTVNRKALKTERRRKLSRLPAVSLEPALQGDRESGDSLRGGIEGAGKEEPLQLVGHLTSEGAADLSDVHFHNKVKQPDPDTIPKKGPGLENRKGQELDSELNSENDEHSGVNQAVPKKRWQRLNQRRAKPRKRTNRFREKENSEGAFGILLPSDPVQERRDEFLEHRTPPSTNIPEDAQTDPNRAGHLDSVGSQLNICDKSSTSLGDMEKEPGIPSLTPQAELPEPAVRSEKKRLRKPSKWLLEYTEEYDQIFAPKKKQKKVQEQVHKVSSRCEEESLLARCRTSAQNKQVDENSLISTKEEPPVLEREAPFLEGPLAQSELGGGHAELPQLTLSVPVAPEVSPRPALESEELLVKTPGNYESKRQRKPTKKLLESNDLDPGFMPKKGDLGLSKKCYEAGHLENGITESGATSHLKEFGGGTAKIFDKPRKRKRQRHITAKAQCKKVRNDDSSKETPSSEGELMTHRTTGSPKETVEEGVEQDPGMPASKRMQGERGGGAALKENVCQNCEKVGELLLCEAQCCGAFHLECLGLTEMPRGKFICNECRTGIHTCFVCKENGEDVKRCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHICITCHAANPASVSASKGRLMRCVRCPVAYHANDFCLAAGSKILASNSIICPNHFTPRRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNIDIPEGNWYCNDCKAGKKPHYREIVWVKVGRYRWWPAEICHPRAVPSNIDKMRHDVGEFPVLFFGSNDYLWTHQARVFPYMEGDVSSKDKMGKGVDGTYKKALQEAAARFEELKAQKELRQLQEDRKNDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSECINRMLLYECHPTVCPAGGRCQNQCFSKRQYPDVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLGVRPKNQPIATEEKSKKFKKKQQGKRRTQGEITKEREDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRPAGKWECPWHQCDICGKEAASFCEMCPSSFCKQHREGMLFISKLDGRLSCTEHDPCGPNPLEPGEIREYVPPPVPLPAGPSTHPAEPSSGVAAQGPKMSDKPPVDTNQTLSLSKKA…
SIO_010081: NSD1
subclass of: SO_0000673
so part of: NSD1
location: join(534655..534684,535425..535514,606250..606385,618263..618435,621240..623802,643838..643962,645930..646200,664302..664411,670439..670514,673384..673502,674433..674576,681207..681330,695749..695949,698999..699178,706424..706580,708185..708390,713373..713485,718805..719074,720425..720541,721878..722019,727084..727190,729002..729206,731682..733309)
location: region:534655-733309:1
so has part: feature:534655-534684:1:exon
so has part: feature:535425-535514:1:exon
so has part: feature:606250-606385:1:exon
so has part: feature:618263-618435:1:exon
so has part: feature:621240-623802:1:exon
so has part: feature:643838-643962:1:exon
so has part: feature:645930-646200:1:exon
so has part: feature:664302-664411:1:exon
so has part: feature:670439-670514:1:exon
so has part: feature:673384-673502:1:exon
so has part: feature:674433-674576:1:exon
so has part: feature:681207-681330:1:exon
so has part: feature:695749-695949:1:exon
so has part: feature:698999-699178:1:exon
so has part: feature:706424-706580:1:exon
so has part: feature:708185-708390:1:exon
so has part: feature:713373-713485:1:exon
so has part: feature:718805-719074:1:exon
so has part: feature:720425-720541:1:exon
so has part: feature:721878-722019:1:exon
so has part: feature:727084-727190:1:exon
so has part: feature:729002-729206:1:exon
so has part: feature:731682-733309:1:exon

XP_012642779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534655-534684:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535425-535514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:606250-606385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:618263-618435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621240-623802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:643838-643962:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:645930-646200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:664302-664411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:670439-670514:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:673384-673502:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:674433-674576:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:681207-681330:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:695749-695949:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:698999-699178:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:706424-706580:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:708185-708390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:713373-713485:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:718805-719074:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:720425-720541:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:721878-722019:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:727084-727190:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:729002-729206:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:731682-733309:1:exon

LOC109730203
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730203
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(616012..616822)
location: region:616012-616822:-1
so has part: feature:616012-616822:-1:exon

109730203
type: Gene
SIO_000068: ncbigene

position:616012:-1
position: 616012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616822:-1
position: 616822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616012-616822:-1:exon

LOC109730203
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: LOC109730203
product: DNA-directed RNA polymerases I, II, and III subunit RPABC4 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_002222956.1
SIO_010081: LOC109730203
so part of: LOC109730203
location: complement(616012..616822)
location: region:616012-616822:-1
so has part: feature:616012-616822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616012-616822:-1:exon

RAB24
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: RAB24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(739336..741590)
location: region:739336-741590:-1
so has part: feature:739336-741590:-1:exon
subclass of: SO_0000010

105883849
type: Gene
SIO_000068: ncbigene

position:739336:-1
position: 739336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741590:-1
position: 741590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:739336-741590:-1:exon

RAB24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RAB24
product: RAB24, member RAS oncogene family, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 201 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012787327.1
SIO_010081: RAB24
subclass of: SO_0000673
so part of: RAB24
location: complement(join(739336..739694,739821..739883,740019..740069,740273..740372,740455..740522,740630..740708,740885..740953,741037..741590))
location: region:739336-741590:-1
so has part: feature:741037-741590:-1:exon
so has part: feature:740885-740953:-1:exon
so has part: feature:740630-740708:-1:exon
so has part: feature:740455-740522:-1:exon
so has part: feature:740273-740372:-1:exon
so has part: feature:740019-740069:-1:exon
so has part: feature:739821-739883:-1:exon
so has part: feature:739336-739694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:741037-741590:-1:exon

position:741037:-1
position: 741037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:740885-740953:-1:exon

position:740885:-1
position: 740885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740953:-1
position: 740953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:740630-740708:-1:exon

position:740630:-1
position: 740630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740708:-1
position: 740708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:740455-740522:-1:exon

position:740455:-1
position: 740455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740522:-1
position: 740522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:740273-740372:-1:exon

position:740273:-1
position: 740273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740372:-1
position: 740372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:740019-740069:-1:exon

position:740019:-1
position: 740019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740069:-1
position: 740069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:739821-739883:-1:exon

position:739821:-1
position: 739821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739883:-1
position: 739883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:739336-739694:-1:exon

position:739694:-1
position: 739694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RAB24
product: RAB24, member RAS oncogene family, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012787326.1
SIO_010081: RAB24
subclass of: SO_0000673
so part of: RAB24
location: complement(join(739336..739728,739821..739883,740019..740069,740273..740372,740455..740522,740630..740708,740885..740953,741037..741580))
location: region:739336-741580:-1
so has part: feature:741037-741580:-1:exon
so has part: feature:740885-740953:-1:exon
so has part: feature:740630-740708:-1:exon
so has part: feature:740455-740522:-1:exon
so has part: feature:740273-740372:-1:exon
so has part: feature:740019-740069:-1:exon
so has part: feature:739821-739883:-1:exon
so has part: feature:739336-739728:-1:exon

position:741580:-1
position: 741580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741037-741580:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740885-740953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740630-740708:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740455-740522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740273-740372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740019-740069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739821-739883:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739336-739728:-1:exon

position:739728:-1
position: 739728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RAB24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-24 isoform X1
translation: MSGQRVDVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQNTIGAAFVAKVMSVGDQTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKELRSLEEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDELFQKVAEDYVSVAAFQVMTECCQAATSLFDRGQGRGSGPEGKPIFLQLLSSLSHHSPGLGELKELLKGARPSFCLGLGGQMFELPQVPMAAEVAPACAGPWNRGSIGLTVGMRRGKG
SIO_010081: RAB24
subclass of: SO_0000673
so part of: RAB24
location: complement(join(739433..739728,739821..739883,740019..740069,740273..740372,740455..740522,740630..740708,740885..740953,741037..741153))
location: region:739433-741153:-1
so has part: feature:741037-741153:-1:exon
so has part: feature:740885-740953:-1:exon
so has part: feature:740630-740708:-1:exon
so has part: feature:740455-740522:-1:exon
so has part: feature:740273-740372:-1:exon
so has part: feature:740019-740069:-1:exon
so has part: feature:739821-739883:-1:exon
so has part: feature:739433-739728:-1:exon

XP_012642780.1
type: Protein
SIO_000068: ncbiprotein

position:739433:-1
position: 739433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741153:-1
position: 741153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741037-741153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740885-740953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740630-740708:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740455-740522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740273-740372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740019-740069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739821-739883:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739433-739728:-1:exon

RAB24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RAB24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-24 isoform X2
translation: MSGQRVDVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQNTIGAAFVAKVMSVGDQTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKELRSLEEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDELFQKVAEDYVSVAAFQVMTEDKGVDLGQKANPYFYSCCHH
SIO_010081: RAB24
subclass of: SO_0000673
so part of: RAB24
location: complement(join(739630..739694,739821..739883,740019..740069,740273..740372,740455..740522,740630..740708,740885..740953,741037..741153))
location: region:739630-741153:-1
so has part: feature:741037-741153:-1:exon
so has part: feature:740885-740953:-1:exon
so has part: feature:740630-740708:-1:exon
so has part: feature:740455-740522:-1:exon
so has part: feature:740273-740372:-1:exon
so has part: feature:740019-740069:-1:exon
so has part: feature:739821-739883:-1:exon
so has part: feature:739630-739694:-1:exon

XP_012642781.1
type: Protein
SIO_000068: ncbiprotein

position:739630:-1
position: 739630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741037-741153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740885-740953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740630-740708:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740455-740522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740273-740372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740019-740069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739821-739883:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739630-739694:-1:exon

PRELID1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: PRELID1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 741618..744665
location: region:741618-744665:1
so has part: feature:741618-744665:1:exon
subclass of: SO_0000010

105883850
type: Gene
SIO_000068: ncbigene

position:741618:1
position: 741618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744665:1
position: 744665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741618-744665:1:exon

PRELID1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PRELID1
product: PRELI domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 mRNAs, 426 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012787328.2
SIO_010081: PRELID1
subclass of: SO_0000673
so part of: PRELID1
location: join(741618..741916,742523..742748,743924..744037,744142..744220,744419..744665)
location: region:741618-744665:1
so has part: feature:741618-741916:1:exon
so has part: feature:742523-742748:1:exon
so has part: feature:743924-744037:1:exon
so has part: feature:744142-744220:1:exon
so has part: feature:744419-744665:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:741618-741916:1:exon

position:741916:1
position: 741916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:742523-742748:1:exon

position:742523:1
position: 742523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742748:1
position: 742748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:743924-744037:1:exon

position:743924:1
position: 743924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744037:1
position: 744037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:744142-744220:1:exon

position:744142:1
position: 744142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744220:1
position: 744220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:744419-744665:1:exon

position:744419:1
position: 744419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRELID1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PRELID1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRELI domain-containing protein 1, mitochondrial
translation: MVKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTNRMPRWAERLFPANVAHSVYILEDSIVDPQNQTMTTFTWNINHARLMMVEERCVYCVNSDNSGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKLQGEAPSRTLVETAKEAKEKAKETALAATEKAKDLANKAATKQQQQQQQFV
SIO_010081: PRELID1
subclass of: SO_0000673
so part of: PRELID1
location: join(741825..741916,742523..742748,743924..744037,744142..744220,744419..744567)
location: region:741825-744567:1
so has part: feature:741825-741916:1:exon
so has part: feature:742523-742748:1:exon
so has part: feature:743924-744037:1:exon
so has part: feature:744142-744220:1:exon
so has part: feature:744419-744567:1:exon

XP_012642782.1
type: Protein
SIO_000068: ncbiprotein

position:741825:1
position: 741825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744567:1
position: 744567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741825-741916:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742523-742748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743924-744037:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:744142-744220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:744419-744567:1:exon

MXD3
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: MXD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(745209..748879)
location: region:745209-748879:-1
so has part: feature:745209-748879:-1:exon
subclass of: SO_0000010

105883851
type: Gene
SIO_000068: ncbigene

position:745209:-1
position: 745209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748879:-1
position: 748879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745209-748879:-1:exon

MXD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MXD3
product: MAX dimerization protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787330.2
SIO_010081: MXD3
subclass of: SO_0000673
so part of: MXD3
location: complement(join(745209..745644,745716..745899,747570..747684,748418..748523,748724..748879))
location: region:745209-748879:-1
so has part: feature:748724-748879:-1:exon
so has part: feature:748418-748523:-1:exon
so has part: feature:747570-747684:-1:exon
so has part: feature:745716-745899:-1:exon
so has part: feature:745209-745644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:748724-748879:-1:exon

position:748724:-1
position: 748724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:748418-748523:-1:exon

position:748418:-1
position: 748418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748523:-1
position: 748523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:747570-747684:-1:exon

position:747570:-1
position: 747570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747684:-1
position: 747684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:745716-745899:-1:exon

position:745716:-1
position: 745716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745899:-1
position: 745899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:745209-745644:-1:exon

position:745644:-1
position: 745644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MXD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MXD3
product: MAX dimerization protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 24 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012787329.2
SIO_010081: MXD3
subclass of: SO_0000673
so part of: MXD3
location: complement(join(745209..745644,745716..745899,747570..747684,747811..747840,748418..748523,748724..748879))
location: region:745209-748879:-1
so has part: feature:748724-748879:-1:exon
so has part: feature:748418-748523:-1:exon
so has part: feature:747811-747840:-1:exon
so has part: feature:747570-747684:-1:exon
so has part: feature:745716-745899:-1:exon
so has part: feature:745209-745644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:748724-748879:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:748418-748523:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:747811-747840:-1:exon

position:747811:-1
position: 747811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747840:-1
position: 747840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:747570-747684:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:745716-745899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:745209-745644:-1:exon

MXD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MXD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: max dimerization protein 3 isoform X2
translation: MEPVATSIQVLLQAAEFLERREREAEHGYASLCPHRSPGPAHRRRTHPPQAAGALDSGRRAQLKRCLERLKQQMPLGADCARYTTLSLLRRARTHIQKLEEQEQRARQLKEQLRGEQRSLQRQLEQLRGLAAPGERERLRADSLDSSGLSSERSDSDQEELEVDVESLVFAGDAELLRGFGAGREHSYSHGAGAWL
SIO_010081: MXD3
subclass of: SO_0000673
so part of: MXD3
location: complement(join(745529..745644,745716..745899,747570..747684,748418..748523,748724..748793))
location: region:745529-748793:-1
so has part: feature:748724-748793:-1:exon
so has part: feature:748418-748523:-1:exon
so has part: feature:747570-747684:-1:exon
so has part: feature:745716-745899:-1:exon
so has part: feature:745529-745644:-1:exon

XP_012642784.1
type: Protein
SIO_000068: ncbiprotein

position:745529:-1
position: 745529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748793:-1
position: 748793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748724-748793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:748418-748523:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:747570-747684:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:745716-745899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:745529-745644:-1:exon

MXD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MXD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: max dimerization protein 3 isoform X1
translation: MEPVATSIQVLLQAAEFLERREREAEHGYASLCPHRSPGPAHRRRTHPPQAAGALDSGRSVHNELEKRRRAQLKRCLERLKQQMPLGADCARYTTLSLLRRARTHIQKLEEQEQRARQLKEQLRGEQRSLQRQLEQLRGLAAPGERERLRADSLDSSGLSSERSDSDQEELEVDVESLVFAGDAELLRGFGAGREHSYSHGAGAWL
SIO_010081: MXD3
subclass of: SO_0000673
so part of: MXD3
location: complement(join(745529..745644,745716..745899,747570..747684,747811..747840,748418..748523,748724..748793))
location: region:745529-748793:-1
so has part: feature:748724-748793:-1:exon
so has part: feature:748418-748523:-1:exon
so has part: feature:747811-747840:-1:exon
so has part: feature:747570-747684:-1:exon
so has part: feature:745716-745899:-1:exon
so has part: feature:745529-745644:-1:exon

XP_012642783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:748724-748793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:748418-748523:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:747811-747840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747570-747684:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:745716-745899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:745529-745644:-1:exon

LMAN2
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LMAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(755949..764675)
location: region:755949-764675:-1
so has part: feature:755949-764675:-1:exon
subclass of: SO_0000010

105883823
type: Gene
SIO_000068: ncbigene

position:755949:-1
position: 755949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764675:-1
position: 764675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755949-764675:-1:exon

LMAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LMAN2
product: lectin, mannose binding 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 335 ESTs, 7 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012787277.1
SIO_010081: LMAN2
subclass of: SO_0000673
so part of: LMAN2
location: complement(join(755949..756626,757533..757652,760534..760648,760789..760950,761135..761214,761908..762270,763093..763500,764561..764675))
location: region:755949-764675:-1
so has part: feature:764561-764675:-1:exon
so has part: feature:763093-763500:-1:exon
so has part: feature:761908-762270:-1:exon
so has part: feature:761135-761214:-1:exon
so has part: feature:760789-760950:-1:exon
so has part: feature:760534-760648:-1:exon
so has part: feature:757533-757652:-1:exon
so has part: feature:755949-756626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:764561-764675:-1:exon

position:764561:-1
position: 764561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:763093-763500:-1:exon

position:763093:-1
position: 763093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763500:-1
position: 763500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:761908-762270:-1:exon

position:761908:-1
position: 761908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762270:-1
position: 762270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:761135-761214:-1:exon

position:761135:-1
position: 761135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761214:-1
position: 761214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:760789-760950:-1:exon

position:760789:-1
position: 760789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760950:-1
position: 760950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:760534-760648:-1:exon

position:760534:-1
position: 760534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760648:-1
position: 760648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:757533-757652:-1:exon

position:757533:-1
position: 757533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757652:-1
position: 757652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:755949-756626:-1:exon

position:756626:-1
position: 756626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LMAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicular integral-membrane protein VIP36
translation: MTCRIWEGSGAFHSTRCCVALLALVVRAPGGQSQSRGPGPNSEIFVGFAARSAAAASAGRLPARGASPASSLGETASACSGFCAALQGSGPLLQGSGRLLQGSGRLQGSGRLLQGSGRLQGSGRLQGSGRLRGSGRLRGCDCSGFSPPAPLPCSLRPPVLATLAFVLLVSDIFKWQVSESRAQEQPGAWRLGLRQPCSLVALVPHLGSAASDSCGPAPGTVPLALSQCQAVVGAVPVPPPVSWKAPGALSRPCPPQPCFLKDWEMHVHFRVHGSGKKNLHGDGIALWYTRDRLAPGPVFGSKDNFHGLAIFLDTYPNDETTERVFPYISVMVNNGSLSYDHSKDGRWTELAGCTADFRNRDHDTFLAVRYSRGRLTVMTDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQLMVEHTPDEDSIDWTKIEPSVSFLKSPKDNVDDPTGNFRSGPLTGWRVFLLLLCALLGIIVCAVVGAVVFQKRQERNKRFY
SIO_010081: LMAN2
subclass of: SO_0000673
so part of: LMAN2
location: complement(join(756466..756626,757533..757652,760534..760648,760789..760950,761135..761214,761908..762270,763093..763500,764561..764675))
location: region:756466-764675:-1
so has part: feature:764561-764675:-1:exon
so has part: feature:763093-763500:-1:exon
so has part: feature:761908-762270:-1:exon
so has part: feature:761135-761214:-1:exon
so has part: feature:760789-760950:-1:exon
so has part: feature:760534-760648:-1:exon
so has part: feature:757533-757652:-1:exon
so has part: feature:756466-756626:-1:exon

XP_012642731.1
type: Protein
SIO_000068: ncbiprotein

position:756466:-1
position: 756466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764561-764675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:763093-763500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761908-762270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761135-761214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:760789-760950:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:760534-760648:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:757533-757652:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:756466-756626:-1:exon

RGS14
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: RGS14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 772887..791554
location: region:772887-791554:1
so has part: feature:772887-791554:1:exon
subclass of: SO_0000010

105883824
type: Gene
SIO_000068: ncbigene

position:772887:1
position: 772887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791554:1
position: 791554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:772887-791554:1:exon

RGS14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RGS14
product: regulator of G-protein signaling 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 122 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020284845.1
SIO_010081: RGS14
subclass of: SO_0000673
so part of: RGS14
location: join(772887..773622,776316..777417,783863..783884,784072..784250,785109..785201,785281..785424,785844..785987,786138..786249,786549..786661,787118..787321,789349..789425,789599..789722,789802..789883,789993..790232,790830..791554)
location: region:772887-791554:1
so has part: feature:772887-773622:1:exon
so has part: feature:776316-777417:1:exon
so has part: feature:783863-783884:1:exon
so has part: feature:784072-784250:1:exon
so has part: feature:785109-785201:1:exon
so has part: feature:785281-785424:1:exon
so has part: feature:785844-785987:1:exon
so has part: feature:786138-786249:1:exon
so has part: feature:786549-786661:1:exon
so has part: feature:787118-787321:1:exon
so has part: feature:789349-789425:1:exon
so has part: feature:789599-789722:1:exon
so has part: feature:789802-789883:1:exon
so has part: feature:789993-790232:1:exon
so has part: feature:790830-791554:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:772887-773622:1:exon

position:773622:1
position: 773622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:776316-777417:1:exon

position:776316:1
position: 776316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777417:1
position: 777417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:783863-783884:1:exon

position:783863:1
position: 783863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783884:1
position: 783884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:784072-784250:1:exon

position:784072:1
position: 784072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784250:1
position: 784250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:785109-785201:1:exon

position:785109:1
position: 785109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785201:1
position: 785201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:785281-785424:1:exon

position:785281:1
position: 785281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785424:1
position: 785424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:785844-785987:1:exon

position:785844:1
position: 785844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785987:1
position: 785987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:786138-786249:1:exon

position:786138:1
position: 786138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786249:1
position: 786249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:786549-786661:1:exon

position:786549:1
position: 786549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786661:1
position: 786661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:787118-787321:1:exon

position:787118:1
position: 787118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787321:1
position: 787321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:789349-789425:1:exon

position:789349:1
position: 789349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789425:1
position: 789425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:789599-789722:1:exon

position:789599:1
position: 789599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789722:1
position: 789722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:789802-789883:1:exon

position:789802:1
position: 789802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789883:1
position: 789883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:789993-790232:1:exon

position:789993:1
position: 789993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790232:1
position: 790232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:790830-791554:1:exon

position:790830:1
position: 790830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RGS14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RGS14
product: regulator of G-protein signaling 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 133 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020284846.1
SIO_010081: RGS14
subclass of: SO_0000673
so part of: RGS14
location: join(772888..773622,776316..777417,783863..783884,784072..784250,785109..785201,785281..785424,785844..785987,786138..786249,786549..786661,787118..787321,789349..789425,789599..789722,789802..789883,789993..790039,790118..790232,790830..791554)
location: region:772888-791554:1
so has part: feature:772888-773622:1:exon
so has part: feature:776316-777417:1:exon
so has part: feature:783863-783884:1:exon
so has part: feature:784072-784250:1:exon
so has part: feature:785109-785201:1:exon
so has part: feature:785281-785424:1:exon
so has part: feature:785844-785987:1:exon
so has part: feature:786138-786249:1:exon
so has part: feature:786549-786661:1:exon
so has part: feature:787118-787321:1:exon
so has part: feature:789349-789425:1:exon
so has part: feature:789599-789722:1:exon
so has part: feature:789802-789883:1:exon
so has part: feature:789993-790039:1:exon
so has part: feature:790118-790232:1:exon
so has part: feature:790830-791554:1:exon

position:772888:1
position: 772888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:772888-773622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:776316-777417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783863-783884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:784072-784250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:785109-785201:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:785281-785424:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:785844-785987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:786138-786249:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:786549-786661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:787118-787321:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789349-789425:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:789599-789722:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:789802-789883:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:789993-790039:1:exon

position:790039:1
position: 790039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:790118-790232:1:exon

position:790118:1
position: 790118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:790830-791554:1:exon

RGS14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RGS14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 14 isoform X1
translation: MPGKPKHLGVPNGRMVLAVSDGELSSVAGPQGQGEGRGSSLSIHSLPSGPSSPFPTEEQTVASWALSFERLLQDPLGLAYFTEFLKKEFSAENVTFWKACERFQQIPASDTQQLAQEARNIYQEFLSSQALSPVNIDRQAWLGEEVLAEPRPDMFRAQQLQIFNLMKFDSYARFVRSPLYRECLLAEAEGRPLREPGSSRRGSPDPTRKKPKLKPGKSLPLGVEDLGQLPPAEGAGGRPLRKSFRRELAGGAANSALRRESQGSLNSSASLDLGFLAFVSSKSESHRKSLGSTEGDSESRPGKYCCVYLPDGTASLALARPGLTIRDMLAGICEKRGLSIPDIKVYLVGNEQKALVLDQDCTVLADQEVRLENRVTFELELAPERVVRLSAKPTKRLQEALRPTLEKHGLTLQQVELRRPGEKQPLDLEKLVSSVAAQRLVLSTLPGAKISEAADVSPCRSQVSDSRGALFHRLLLPSCCGSDPTFSQGCLPRTQDKATHPPPVPPTSLAKVSSSVPGKRQTCDIEGLVELLNRLQSSGAHDQRGLLRREDLVLPEFLQLPAQGPSSREAPSQTESAAQPTGAASNSTARPAL
SIO_010081: RGS14
subclass of: SO_0000673
so part of: RGS14
location: join(777373..777417,783863..783884,784072..784250,785109..785201,785281..785424,785844..785987,786138..786249,786549..786661,787118..787321,789349..789425,789599..789722,789802..789883,789993..790232,790830..791032)
location: region:777373-791032:1
so has part: feature:777373-777417:1:exon
so has part: feature:783863-783884:1:exon
so has part: feature:784072-784250:1:exon
so has part: feature:785109-785201:1:exon
so has part: feature:785281-785424:1:exon
so has part: feature:785844-785987:1:exon
so has part: feature:786138-786249:1:exon
so has part: feature:786549-786661:1:exon
so has part: feature:787118-787321:1:exon
so has part: feature:789349-789425:1:exon
so has part: feature:789599-789722:1:exon
so has part: feature:789802-789883:1:exon
so has part: feature:789993-790232:1:exon
so has part: feature:790830-791032:1:exon

XP_020140434.1
type: Protein
SIO_000068: ncbiprotein

position:777373:1
position: 777373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791032:1
position: 791032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777373-777417:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783863-783884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:784072-784250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:785109-785201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:785281-785424:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:785844-785987:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:786138-786249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:786549-786661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:787118-787321:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:789349-789425:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789599-789722:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:789802-789883:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:789993-790232:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790830-791032:1:exon

RGS14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RGS14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 14 isoform X2
translation: MPGKPKHLGVPNGRMVLAVSDGELSSVAGPQGQGEGRGSSLSIHSLPSGPSSPFPTEEQTVASWALSFERLLQDPLGLAYFTEFLKKEFSAENVTFWKACERFQQIPASDTQQLAQEARNIYQEFLSSQALSPVNIDRQAWLGEEVLAEPRPDMFRAQQLQIFNLMKFDSYARFVRSPLYRECLLAEAEGRPLREPGSSRRGSPDPTRKKPKLKPGKSLPLGVEDLGQLPPAEGAGGRPLRKSFRRELAGGAANSALRRESQGSLNSSASLDLGFLAFVSSKSESHRKSLGSTEGDSESRPGKYCCVYLPDGTASLALARPGLTIRDMLAGICEKRGLSIPDIKVYLVGNEQKALVLDQDCTVLADQEVRLENRVTFELELAPERVVRLSAKPTKRLQEALRPTLEKHGLTLQQVELRRPGEKQPLDLEKLVSSVAAQRLVLSTLPGAKISEAADVSPCRSQGCLPRTQDKATHPPPVPPTSLAKVSSSVPGKRQTCDIEGLVELLNRLQSSGAHDQRGLLRREDLVLPEFLQLPAQGPSSREAPSQTESAAQPTGAASNSTARPAL
SIO_010081: RGS14
subclass of: SO_0000673
so part of: RGS14
location: join(777373..777417,783863..783884,784072..784250,785109..785201,785281..785424,785844..785987,786138..786249,786549..786661,787118..787321,789349..789425,789599..789722,789802..789883,789993..790039,790118..790232,790830..791032)
location: region:777373-791032:1
so has part: feature:777373-777417:1:exon
so has part: feature:783863-783884:1:exon
so has part: feature:784072-784250:1:exon
so has part: feature:785109-785201:1:exon
so has part: feature:785281-785424:1:exon
so has part: feature:785844-785987:1:exon
so has part: feature:786138-786249:1:exon
so has part: feature:786549-786661:1:exon
so has part: feature:787118-787321:1:exon
so has part: feature:789349-789425:1:exon
so has part: feature:789599-789722:1:exon
so has part: feature:789802-789883:1:exon
so has part: feature:789993-790039:1:exon
so has part: feature:790118-790232:1:exon
so has part: feature:790830-791032:1:exon

XP_020140435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:777373-777417:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783863-783884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:784072-784250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:785109-785201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:785281-785424:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:785844-785987:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:786138-786249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:786549-786661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:787118-787321:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:789349-789425:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789599-789722:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:789802-789883:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:789993-790039:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790118-790232:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:790830-791032:1:exon

SLC34A1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: SLC34A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 802925..816195
location: region:802925-816195:1
so has part: feature:802925-816195:1:exon
subclass of: SO_0000010

105883852
type: Gene
SIO_000068: ncbigene

position:802925:1
position: 802925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816195:1
position: 816195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802925-816195:1:exon

SLC34A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SLC34A1
product: solute carrier family 34 member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787332.1
SIO_010081: SLC34A1
subclass of: SO_0000673
so part of: SLC34A1
location: join(802925..802995,804057..804186,804307..804456,804547..804678,804751..804894,806469..806580,806701..806896,806986..807081,812616..812685,812916..813083,814162..814278,814379..814503,815178..816195)
location: region:802925-816195:1
so has part: feature:802925-802995:1:exon
so has part: feature:804057-804186:1:exon
so has part: feature:804307-804456:1:exon
so has part: feature:804547-804678:1:exon
so has part: feature:804751-804894:1:exon
so has part: feature:806469-806580:1:exon
so has part: feature:806701-806896:1:exon
so has part: feature:806986-807081:1:exon
so has part: feature:812616-812685:1:exon
so has part: feature:812916-813083:1:exon
so has part: feature:814162-814278:1:exon
so has part: feature:814379-814503:1:exon
so has part: feature:815178-816195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:802925-802995:1:exon

position:802995:1
position: 802995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:804057-804186:1:exon

position:804057:1
position: 804057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804186:1
position: 804186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:804307-804456:1:exon

position:804307:1
position: 804307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804456:1
position: 804456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:804547-804678:1:exon

position:804547:1
position: 804547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804678:1
position: 804678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:804751-804894:1:exon

position:804751:1
position: 804751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804894:1
position: 804894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:806469-806580:1:exon

position:806469:1
position: 806469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806580:1
position: 806580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:806701-806896:1:exon

position:806701:1
position: 806701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806896:1
position: 806896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:806986-807081:1:exon

position:806986:1
position: 806986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807081:1
position: 807081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:812616-812685:1:exon

position:812616:1
position: 812616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812685:1
position: 812685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:812916-813083:1:exon

position:812916:1
position: 812916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813083:1
position: 813083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:814162-814278:1:exon

position:814162:1
position: 814162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814278:1
position: 814278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:814379-814503:1:exon

position:814379:1
position: 814379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814503:1
position: 814503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:815178-816195:1:exon

position:815178:1
position: 815178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC34A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SLC34A1
product: solute carrier family 34 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787331.2
SIO_010081: SLC34A1
subclass of: SO_0000673
so part of: SLC34A1
location: join(803374..804186,804307..804456,804547..804678,804751..804894,806469..806580,806701..806896,806986..807081,812616..812685,812916..813083,814162..814278,814379..814503,815178..816195)
location: region:803374-816195:1
so has part: feature:803374-804186:1:exon
so has part: feature:804307-804456:1:exon
so has part: feature:804547-804678:1:exon
so has part: feature:804751-804894:1:exon
so has part: feature:806469-806580:1:exon
so has part: feature:806701-806896:1:exon
so has part: feature:806986-807081:1:exon
so has part: feature:812616-812685:1:exon
so has part: feature:812916-813083:1:exon
so has part: feature:814162-814278:1:exon
so has part: feature:814379-814503:1:exon
so has part: feature:815178-816195:1:exon

position:803374:1
position: 803374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803374-804186:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:804307-804456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:804547-804678:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:804751-804894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806469-806580:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:806701-806896:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:806986-807081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812616-812685:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:812916-813083:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:814162-814278:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:814379-814503:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:815178-816195:1:exon

SLC34A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SLC34A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transport protein 2A isoform X1
translation: MLAERMRERPNAQICMGHLRVCLGGRVLGGEVAGCALLGVCGVMQHGGCAPEPVWVQGACAGQQLRFSVAATPDPQASRRVPRMMSYGEGLGSPAMSPLPVHRGHVMRGAAFAYVPSPPVLHRIPGTSAYAFPSLGPVALAEHGCPCGEAPERRDPLPAKLALEEEQKPEPGLIPKLLRGAGATLLKVPLMLTFLYLFVCSLDVLSSAFQLAGGKVAGDIFKDNAILSNPVAGLVVGILVTVLVQSSSTSTSIVVSMVSSGLLEVSSAIPIIMGSNIGTSVTNTIVALMQAGDRTDFRRAFAGATVHDCFNWLSVLVLLPLEAATGYLHHVTGLVVASFNIRGGRDAPDLLKIITEPFTRLIIQLDKSVIAGIATGDESLRNHSLIRIWCQPDPTAAPTSTSRLEANTSQTLGNATMEKCNHLFVDTGLPDLAVGLILLAGSLVLLCTCLILLVKTLNSLLKGPVAKVIQKVINTDFPAPFTWATGYFAMVVGAGMTFVVQSSSVFTSAITPLIGLGVISIERAYPLTLGSNIGTTTTAILAALASPREKLSSSFQIALCHFFFNISGILLWYPVPCTRLPIRMAKALGKRTAKYRWFAVLYLLVCFLLLPSLVFGISMAGWQAMVGVGAPFGALLAFVVLVSVLQSRSPSRLPKWLQTWDFLPRWMHSLQPLDRLITRATLCYARPEPRSPSLPARVFLEELPPATPSPRLALPARHSATYL
SIO_010081: SLC34A1
subclass of: SO_0000673
so part of: SLC34A1
location: join(803829..804186,804307..804456,804547..804678,804751..804894,806469..806580,806701..806896,806986..807081,812616..812685,812916..813083,814162..814278,814379..814503,815178..815681)
location: region:803829-815681:1
so has part: feature:803829-804186:1:exon
so has part: feature:804307-804456:1:exon
so has part: feature:804547-804678:1:exon
so has part: feature:804751-804894:1:exon
so has part: feature:806469-806580:1:exon
so has part: feature:806701-806896:1:exon
so has part: feature:806986-807081:1:exon
so has part: feature:812616-812685:1:exon
so has part: feature:812916-813083:1:exon
so has part: feature:814162-814278:1:exon
so has part: feature:814379-814503:1:exon
so has part: feature:815178-815681:1:exon

XP_012642785.1
type: Protein
SIO_000068: ncbiprotein

position:803829:1
position: 803829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815681:1
position: 815681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803829-804186:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:804307-804456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:804547-804678:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:804751-804894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806469-806580:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:806701-806896:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:806986-807081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812616-812685:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:812916-813083:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:814162-814278:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:814379-814503:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:815178-815681:1:exon

SLC34A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SLC34A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transport protein 2A isoform X2
translation: MMSYGEGLGSPAMSPLPVHRGHVMRGAAFAYVPSPPVLHRIPGTSAYAFPSLGPVALAEHGCPCGEAPERRDPLPAKLALEEEQKPEPGLIPKLLRGAGATLLKVPLMLTFLYLFVCSLDVLSSAFQLAGGKVAGDIFKDNAILSNPVAGLVVGILVTVLVQSSSTSTSIVVSMVSSGLLEVSSAIPIIMGSNIGTSVTNTIVALMQAGDRTDFRRAFAGATVHDCFNWLSVLVLLPLEAATGYLHHVTGLVVASFNIRGGRDAPDLLKIITEPFTRLIIQLDKSVIAGIATGDESLRNHSLIRIWCQPDPTAAPTSTSRLEANTSQTLGNATMEKCNHLFVDTGLPDLAVGLILLAGSLVLLCTCLILLVKTLNSLLKGPVAKVIQKVINTDFPAPFTWATGYFAMVVGAGMTFVVQSSSVFTSAITPLIGLGVISIERAYPLTLGSNIGTTTTAILAALASPREKLSSSFQIALCHFFFNISGILLWYPVPCTRLPIRMAKALGKRTAKYRWFAVLYLLVCFLLLPSLVFGISMAGWQAMVGVGAPFGALLAFVVLVSVLQSRSPSRLPKWLQTWDFLPRWMHSLQPLDRLITRATLCYARPEPRSPSLPARVFLEELPPATPSPRLALPARHSATYL
SIO_010081: SLC34A1
subclass of: SO_0000673
so part of: SLC34A1
location: join(804078..804186,804307..804456,804547..804678,804751..804894,806469..806580,806701..806896,806986..807081,812616..812685,812916..813083,814162..814278,814379..814503,815178..815681)
location: region:804078-815681:1
so has part: feature:804078-804186:1:exon
so has part: feature:804307-804456:1:exon
so has part: feature:804547-804678:1:exon
so has part: feature:804751-804894:1:exon
so has part: feature:806469-806580:1:exon
so has part: feature:806701-806896:1:exon
so has part: feature:806986-807081:1:exon
so has part: feature:812616-812685:1:exon
so has part: feature:812916-813083:1:exon
so has part: feature:814162-814278:1:exon
so has part: feature:814379-814503:1:exon
so has part: feature:815178-815681:1:exon

XP_012642786.1
type: Protein
SIO_000068: ncbiprotein

position:804078:1
position: 804078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804078-804186:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:804307-804456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:804547-804678:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:804751-804894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806469-806580:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:806701-806896:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:806986-807081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812616-812685:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:812916-813083:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:814162-814278:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:814379-814503:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:815178-815681:1:exon

PFN3
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: PFN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(817421..818193)
location: region:817421-818193:-1
so has part: feature:817421-818193:-1:exon
subclass of: SO_0000010

105883834
type: Gene
SIO_000068: ncbigene

position:817421:-1
position: 817421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818193:-1
position: 818193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817421-818193:-1:exon

PFN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PFN3
product: profilin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012787288.1
SIO_010081: PFN3
subclass of: SO_0000673
so part of: PFN3
location: complement(817421..818193)
location: region:817421-818193:-1
so has part: feature:817421-818193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:817421-818193:-1:exon

PFN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PFN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: profilin-3
translation: MGDWKGYISAVLRDQRIDDVAIVGHADNRCVWASRPGGLLAAISPQEVGVLTGPDRRTFLQAGLSVAGRRCCVIRDHLLAEGDGVLDARTKGLDGRAVCVGHSPRALLVLMGRRGVHGGVLNKTVHELIRGLRTQGA
SIO_010081: PFN3
subclass of: SO_0000673
so part of: PFN3
location: complement(817519..817932)
location: region:817519-817932:-1
so has part: feature:817519-817932:-1:exon

XP_012642742.1
type: Protein
SIO_000068: ncbiprotein

position:817519:-1
position: 817519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817932:-1
position: 817932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817519-817932:-1:exon

F12
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: F12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(819563..830471)
location: region:819563-830471:-1
so has part: feature:819563-830471:-1:exon
subclass of: SO_0000010

105883825
type: Gene
SIO_000068: ncbigene

position:819563:-1
position: 819563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830471:-1
position: 830471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819563-830471:-1:exon

F12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: F12
product: coagulation factor XII, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284842.1
SIO_010081: F12
subclass of: SO_0000673
so part of: F12
location: complement(join(819563..820301,820393..820541,821063..821212,821304..821440,821625..821856,821962..822203,822301..822466,822835..822966,823104..823214,823514..823584,823732..823831,829978..830035,830369..830471))
location: region:819563-830471:-1
so has part: feature:830369-830471:-1:exon
so has part: feature:829978-830035:-1:exon
so has part: feature:823732-823831:-1:exon
so has part: feature:823514-823584:-1:exon
so has part: feature:823104-823214:-1:exon
so has part: feature:822835-822966:-1:exon
so has part: feature:822301-822466:-1:exon
so has part: feature:821962-822203:-1:exon
so has part: feature:821625-821856:-1:exon
so has part: feature:821304-821440:-1:exon
so has part: feature:821063-821212:-1:exon
so has part: feature:820393-820541:-1:exon
so has part: feature:819563-820301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:830369-830471:-1:exon

position:830369:-1
position: 830369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:829978-830035:-1:exon

position:829978:-1
position: 829978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830035:-1
position: 830035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:823732-823831:-1:exon

position:823732:-1
position: 823732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823831:-1
position: 823831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:823514-823584:-1:exon

position:823514:-1
position: 823514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823584:-1
position: 823584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:823104-823214:-1:exon

position:823104:-1
position: 823104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823214:-1
position: 823214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:822835-822966:-1:exon

position:822835:-1
position: 822835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822966:-1
position: 822966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:822301-822466:-1:exon

position:822301:-1
position: 822301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822466:-1
position: 822466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:821962-822203:-1:exon

position:821962:-1
position: 821962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822203:-1
position: 822203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:821625-821856:-1:exon

position:821625:-1
position: 821625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821856:-1
position: 821856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:821304-821440:-1:exon

position:821304:-1
position: 821304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821440:-1
position: 821440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:821063-821212:-1:exon

position:821063:-1
position: 821063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821212:-1
position: 821212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:820393-820541:-1:exon

position:820393:-1
position: 820393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820541:-1
position: 820541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:819563-820301:-1:exon

position:820301:-1
position: 820301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

F12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: F12
product: coagulation factor XII, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284841.1
SIO_010081: F12
subclass of: SO_0000673
so part of: F12
location: complement(join(819563..820301,820393..820541,821063..821212,821304..821440,821625..821856,821962..822203,822301..822466,822597..822701,822835..822966,823104..823214,823514..823584,823732..823831,829978..830035,830369..830471))
location: region:819563-830471:-1
so has part: feature:830369-830471:-1:exon
so has part: feature:829978-830035:-1:exon
so has part: feature:823732-823831:-1:exon
so has part: feature:823514-823584:-1:exon
so has part: feature:823104-823214:-1:exon
so has part: feature:822835-822966:-1:exon
so has part: feature:822597-822701:-1:exon
so has part: feature:822301-822466:-1:exon
so has part: feature:821962-822203:-1:exon
so has part: feature:821625-821856:-1:exon
so has part: feature:821304-821440:-1:exon
so has part: feature:821063-821212:-1:exon
so has part: feature:820393-820541:-1:exon
so has part: feature:819563-820301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:830369-830471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829978-830035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823732-823831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:823514-823584:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:823104-823214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822835-822966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:822597-822701:-1:exon

position:822597:-1
position: 822597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822701:-1
position: 822701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:822301-822466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:821962-822203:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:821625-821856:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:821304-821440:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:821063-821212:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:820393-820541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:819563-820301:-1:exon

F12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: F12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor XII isoform X2
translation: MRALLLLGSLLVHLESTLSAPPWKAPKEHKVKVDEHTVVVTVTGEPCHFPFQYHRRLHHKCIHKGQPGPRPWCATTPNFDQDQRWAYCLEPKNVKDHCSKHSPCQKGGTCVNTLTGPHCLCPEHLTGRHCQREKCFEPQLLQFFHEDEMWYRVEPPGVAKCRCRGPDAHCKPVASRDTEARCRDGRGLSYRGMAQTTLSGAPCQPWASETTYRNVTAEQALKWGLGGHPFCRNPDNDTRPWCFVWSGDRLSWEYCDLARCQPPVQAAPPLRVPAGRQDLPSPPQPPPSPPQHPPLLQKPQPTTQTQPQSQTPALLPKLEQRSPPAGTGQLGCGKRLRKRLSSLSRVVGGLVALPGAHPYIAALYWGQRFCAGSLIGPCWVLTAAHCLQDRPAAEELTVVLGQDRHNQSCKQCQTLAVRSYRLHEAFSPVSYQHDLALLRLQESADGSCALPSDYVQPVCLPSGAAPQAELQAALCQVAGWGHQFEGAEEYSSFLQEAQVPFISLERCSAPDVHGAAVLPGMLCAGFLEGGTDACQGDSGGPLVCEDEAAEQRLTLRGIVSWGSGCGDRNKPGVYTDVANYLAWIQEHTAS
SIO_010081: F12
subclass of: SO_0000673
so part of: F12
location: complement(join(820134..820301,820393..820541,821063..821212,821304..821440,821625..821856,821962..822203,822301..822466,822835..822966,823104..823214,823514..823584,823732..823831,829978..830035,830369..830425))
location: region:820134-830425:-1
so has part: feature:830369-830425:-1:exon
so has part: feature:829978-830035:-1:exon
so has part: feature:823732-823831:-1:exon
so has part: feature:823514-823584:-1:exon
so has part: feature:823104-823214:-1:exon
so has part: feature:822835-822966:-1:exon
so has part: feature:822301-822466:-1:exon
so has part: feature:821962-822203:-1:exon
so has part: feature:821625-821856:-1:exon
so has part: feature:821304-821440:-1:exon
so has part: feature:821063-821212:-1:exon
so has part: feature:820393-820541:-1:exon
so has part: feature:820134-820301:-1:exon

XP_020140431.1
type: Protein
SIO_000068: ncbiprotein

position:820134:-1
position: 820134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830425:-1
position: 830425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830369-830425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829978-830035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823732-823831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:823514-823584:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:823104-823214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822835-822966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:822301-822466:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821962-822203:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:821625-821856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:821304-821440:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:821063-821212:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:820393-820541:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:820134-820301:-1:exon

F12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: F12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor XII isoform X1
translation: MRALLLLGSLLVHLESTLSAPPWKAPKEHKVKVDEHTVVVTVTGEPCHFPFQYHRRLHHKCIHKGQPGPRPWCATTPNFDQDQRWAYCLEPKNVKDHCSKHSPCQKGGTCVNTLTGPHCLCPEHLTGRHCQREKCFEPQLLQFFHEDEMWYRVEPPGVAKCRCRGPDAHCKPVASRACRANPCLNRGRCLEAEGLRLCQCPEGYAGPFCDVDTEARCRDGRGLSYRGMAQTTLSGAPCQPWASETTYRNVTAEQALKWGLGGHPFCRNPDNDTRPWCFVWSGDRLSWEYCDLARCQPPVQAAPPLRVPAGRQDLPSPPQPPPSPPQHPPLLQKPQPTTQTQPQSQTPALLPKLEQRSPPAGTGQLGCGKRLRKRLSSLSRVVGGLVALPGAHPYIAALYWGQRFCAGSLIGPCWVLTAAHCLQDRPAAEELTVVLGQDRHNQSCKQCQTLAVRSYRLHEAFSPVSYQHDLALLRLQESADGSCALPSDYVQPVCLPSGAAPQAELQAALCQVAGWGHQFEGAEEYSSFLQEAQVPFISLERCSAPDVHGAAVLPGMLCAGFLEGGTDACQGDSGGPLVCEDEAAEQRLTLRGIVSWGSGCGDRNKPGVYTDVANYLAWIQEHTAS
SIO_010081: F12
subclass of: SO_0000673
so part of: F12
location: complement(join(820134..820301,820393..820541,821063..821212,821304..821440,821625..821856,821962..822203,822301..822466,822597..822701,822835..822966,823104..823214,823514..823584,823732..823831,829978..830035,830369..830425))
location: region:820134-830425:-1
so has part: feature:830369-830425:-1:exon
so has part: feature:829978-830035:-1:exon
so has part: feature:823732-823831:-1:exon
so has part: feature:823514-823584:-1:exon
so has part: feature:823104-823214:-1:exon
so has part: feature:822835-822966:-1:exon
so has part: feature:822597-822701:-1:exon
so has part: feature:822301-822466:-1:exon
so has part: feature:821962-822203:-1:exon
so has part: feature:821625-821856:-1:exon
so has part: feature:821304-821440:-1:exon
so has part: feature:821063-821212:-1:exon
so has part: feature:820393-820541:-1:exon
so has part: feature:820134-820301:-1:exon

XP_020140430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:830369-830425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829978-830035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823732-823831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:823514-823584:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:823104-823214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822835-822966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:822597-822701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:822301-822466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:821962-822203:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:821625-821856:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:821304-821440:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:821063-821212:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:820393-820541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:820134-820301:-1:exon

LOC109730201
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730201
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(833625..844433)
location: region:833625-844433:-1
so has part: feature:833625-844433:-1:exon
subclass of: SO_0000011

109730201
type: Gene
SIO_000068: ncbigene

position:833625:-1
position: 833625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844433:-1
position: 844433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833625-844433:-1:exon

LOC109730201
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC109730201
product: uncharacterized LOC109730201
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222955.1
SIO_010081: LOC109730201
subclass of: SO_0000673
so part of: LOC109730201
location: complement(join(833625..833683,842272..842434,844318..844433))
location: region:833625-844433:-1
so has part: feature:844318-844433:-1:exon
so has part: feature:842272-842434:-1:exon
so has part: feature:833625-833683:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:844318-844433:-1:exon

position:844318:-1
position: 844318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:842272-842434:-1:exon

position:842272:-1
position: 842272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842434:-1
position: 842434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:833625-833683:-1:exon

position:833683:-1
position: 833683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRK6
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: GRK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 853710..870441
location: region:853710-870441:1
so has part: feature:853710-870441:1:exon
subclass of: SO_0000010

105883855
type: Gene
SIO_000068: ncbigene

position:853710:1
position: 853710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870441:1
position: 870441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853710-870441:1:exon

GRK6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GRK6
product: G protein-coupled receptor kinase 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012787337.1
SIO_010081: GRK6
subclass of: SO_0000673
so part of: GRK6
location: join(853710..853908,858432..858527,859501..859613,859728..859805,860113..860213,860535..860627,860749..860812,860944..861084,861319..861509,862650..862687,862768..862857,863891..864099,864200..864325,868296..868433,868515..868649,869304..870441)
location: region:853710-870441:1
so has part: feature:853710-853908:1:exon
so has part: feature:858432-858527:1:exon
so has part: feature:859501-859613:1:exon
so has part: feature:859728-859805:1:exon
so has part: feature:860113-860213:1:exon
so has part: feature:860535-860627:1:exon
so has part: feature:860749-860812:1:exon
so has part: feature:860944-861084:1:exon
so has part: feature:861319-861509:1:exon
so has part: feature:862650-862687:1:exon
so has part: feature:862768-862857:1:exon
so has part: feature:863891-864099:1:exon
so has part: feature:864200-864325:1:exon
so has part: feature:868296-868433:1:exon
so has part: feature:868515-868649:1:exon
so has part: feature:869304-870441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853710-853908:1:exon

position:853908:1
position: 853908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:858432-858527:1:exon

position:858432:1
position: 858432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858527:1
position: 858527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:859501-859613:1:exon

position:859501:1
position: 859501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859613:1
position: 859613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:859728-859805:1:exon

position:859728:1
position: 859728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859805:1
position: 859805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:860113-860213:1:exon

position:860113:1
position: 860113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860213:1
position: 860213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:860535-860627:1:exon

position:860535:1
position: 860535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860627:1
position: 860627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:860749-860812:1:exon

position:860749:1
position: 860749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860812:1
position: 860812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:860944-861084:1:exon

position:860944:1
position: 860944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861084:1
position: 861084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:861319-861509:1:exon

position:861319:1
position: 861319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861509:1
position: 861509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:862650-862687:1:exon

position:862650:1
position: 862650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862687:1
position: 862687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:862768-862857:1:exon

position:862768:1
position: 862768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862857:1
position: 862857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:863891-864099:1:exon

position:863891:1
position: 863891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864099:1
position: 864099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:864200-864325:1:exon

position:864200:1
position: 864200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864325:1
position: 864325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:868296-868433:1:exon

position:868296:1
position: 868296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868433:1
position: 868433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:868515-868649:1:exon

position:868515:1
position: 868515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868649:1
position: 868649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:869304-870441:1:exon

position:869304:1
position: 869304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRK6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GRK6
product: G protein-coupled receptor kinase 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 157 ESTs, 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012787338.1
SIO_010081: GRK6
subclass of: SO_0000673
so part of: GRK6
location: join(853710..853908,858432..858527,859501..859613,859728..859805,860113..860213,860535..860627,860749..860812,860944..861084,861319..861509,862650..862687,862768..862857,863891..864099,864188..864325,868296..868433,868515..868649,869306..870440)
location: region:853710-870440:1
so has part: feature:853710-853908:1:exon
so has part: feature:858432-858527:1:exon
so has part: feature:859501-859613:1:exon
so has part: feature:859728-859805:1:exon
so has part: feature:860113-860213:1:exon
so has part: feature:860535-860627:1:exon
so has part: feature:860749-860812:1:exon
so has part: feature:860944-861084:1:exon
so has part: feature:861319-861509:1:exon
so has part: feature:862650-862687:1:exon
so has part: feature:862768-862857:1:exon
so has part: feature:863891-864099:1:exon
so has part: feature:864188-864325:1:exon
so has part: feature:868296-868433:1:exon
so has part: feature:868515-868649:1:exon
so has part: feature:869306-870440:1:exon

position:870440:1
position: 870440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853710-853908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:858432-858527:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859501-859613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859728-859805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860113-860213:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860535-860627:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:860749-860812:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:860944-861084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:861319-861509:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:862650-862687:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:862768-862857:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:863891-864099:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:864188-864325:1:exon

position:864188:1
position: 864188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:868296-868433:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:868515-868649:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:869306-870440:1:exon

position:869306:1
position: 869306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRK6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GRK6
product: G protein-coupled receptor kinase 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 112 ESTs, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012787339.1
SIO_010081: GRK6
subclass of: SO_0000673
so part of: GRK6
location: join(853710..853908,858432..858527,859501..859613,859728..859805,860113..860213,860535..860627,860749..860812,860944..861084,861319..861509,862650..862687,862768..862857,863891..864099,864188..864325,868296..868433,868515..868649,868827..869296)
location: region:853710-869296:1
so has part: feature:853710-853908:1:exon
so has part: feature:858432-858527:1:exon
so has part: feature:859501-859613:1:exon
so has part: feature:859728-859805:1:exon
so has part: feature:860113-860213:1:exon
so has part: feature:860535-860627:1:exon
so has part: feature:860749-860812:1:exon
so has part: feature:860944-861084:1:exon
so has part: feature:861319-861509:1:exon
so has part: feature:862650-862687:1:exon
so has part: feature:862768-862857:1:exon
so has part: feature:863891-864099:1:exon
so has part: feature:864188-864325:1:exon
so has part: feature:868296-868433:1:exon
so has part: feature:868515-868649:1:exon
so has part: feature:868827-869296:1:exon

position:869296:1
position: 869296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853710-853908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:858432-858527:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859501-859613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859728-859805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860113-860213:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860535-860627:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:860749-860812:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:860944-861084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:861319-861509:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:862650-862687:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:862768-862857:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:863891-864099:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:864188-864325:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:868296-868433:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:868515-868649:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:868827-869296:1:exon

position:868827:1
position: 868827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRK6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GRK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-coupled receptor kinase 6 isoform X1
translation: MELENIVANTVLLKAREGGGGNRKGKSKKWRQMLQFPHISQCEELRLSLERDYHSLCERQPIGRLLFREFCATRPELTRCVAFLDGVAEYEVTPDEKRKACGRRLVQNFLSHTGPDLIPEVPRQLVTNCAQRLEQGPCKDLFQELTRVTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQDPEERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVFGLDGSVPPDLDWKGQPPAPPKKGLLQRLFSRQRIAVGTAATVRKSSPPASSSLPASSPEPEAPTGTWR
SIO_010081: GRK6
subclass of: SO_0000673
so part of: GRK6
location: join(853857..853908,858432..858527,859501..859613,859728..859805,860113..860213,860535..860627,860749..860812,860944..861084,861319..861509,862650..862687,862768..862857,863891..864099,864200..864325,868296..868433,868515..868649,869304..869414)
location: region:853857-869414:1
so has part: feature:853857-853908:1:exon
so has part: feature:858432-858527:1:exon
so has part: feature:859501-859613:1:exon
so has part: feature:859728-859805:1:exon
so has part: feature:860113-860213:1:exon
so has part: feature:860535-860627:1:exon
so has part: feature:860749-860812:1:exon
so has part: feature:860944-861084:1:exon
so has part: feature:861319-861509:1:exon
so has part: feature:862650-862687:1:exon
so has part: feature:862768-862857:1:exon
so has part: feature:863891-864099:1:exon
so has part: feature:864200-864325:1:exon
so has part: feature:868296-868433:1:exon
so has part: feature:868515-868649:1:exon
so has part: feature:869304-869414:1:exon

XP_012642791.1
type: Protein
SIO_000068: ncbiprotein

position:853857:1
position: 853857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869414:1
position: 869414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853857-853908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:858432-858527:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859501-859613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859728-859805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860113-860213:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860535-860627:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:860749-860812:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:860944-861084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:861319-861509:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:862650-862687:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:862768-862857:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:863891-864099:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:864200-864325:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:868296-868433:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:868515-868649:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:869304-869414:1:exon

GRK6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GRK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-coupled receptor kinase 6 isoform X2
translation: MELENIVANTVLLKAREGGGGNRKGKSKKWRQMLQFPHISQCEELRLSLERDYHSLCERQPIGRLLFREFCATRPELTRCVAFLDGVAEYEVTPDEKRKACGRRLVQNFLSHTGPDLIPEVPRQLVTNCAQRLEQGPCKDLFQELTRVTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPEERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVFGLDGSVPPDLDWKGQPPAPPKKGLLQRLFSRQDCCGNCSDSEEELPTRLELPTRL
SIO_010081: GRK6
subclass of: SO_0000673
so part of: GRK6
location: join(853857..853908,858432..858527,859501..859613,859728..859805,860113..860213,860535..860627,860749..860812,860944..861084,861319..861509,862650..862687,862768..862857,863891..864099,864188..864325,868296..868433,868515..868649,869306..869377)
location: region:853857-869377:1
so has part: feature:853857-853908:1:exon
so has part: feature:858432-858527:1:exon
so has part: feature:859501-859613:1:exon
so has part: feature:859728-859805:1:exon
so has part: feature:860113-860213:1:exon
so has part: feature:860535-860627:1:exon
so has part: feature:860749-860812:1:exon
so has part: feature:860944-861084:1:exon
so has part: feature:861319-861509:1:exon
so has part: feature:862650-862687:1:exon
so has part: feature:862768-862857:1:exon
so has part: feature:863891-864099:1:exon
so has part: feature:864188-864325:1:exon
so has part: feature:868296-868433:1:exon
so has part: feature:868515-868649:1:exon
so has part: feature:869306-869377:1:exon

XP_012642792.1
type: Protein
SIO_000068: ncbiprotein

position:869377:1
position: 869377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853857-853908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:858432-858527:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859501-859613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859728-859805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860113-860213:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860535-860627:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:860749-860812:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:860944-861084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:861319-861509:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:862650-862687:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:862768-862857:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:863891-864099:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:864188-864325:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:868296-868433:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:868515-868649:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:869306-869377:1:exon

GRK6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GRK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-coupled receptor kinase 6 isoform X3
translation: MELENIVANTVLLKAREGGGGNRKGKSKKWRQMLQFPHISQCEELRLSLERDYHSLCERQPIGRLLFREFCATRPELTRCVAFLDGVAEYEVTPDEKRKACGRRLVQNFLSHTGPDLIPEVPRQLVTNCAQRLEQGPCKDLFQELTRVTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPEERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVFGLDGSVPPDLDWKGQPPAPPKKGLLQRLFSRQR
SIO_010081: GRK6
subclass of: SO_0000673
so part of: GRK6
location: join(853857..853908,858432..858527,859501..859613,859728..859805,860113..860213,860535..860627,860749..860812,860944..861084,861319..861509,862650..862687,862768..862857,863891..864099,864188..864325,868296..868433,868515..868649,868827..868832)
location: region:853857-868832:1
so has part: feature:853857-853908:1:exon
so has part: feature:858432-858527:1:exon
so has part: feature:859501-859613:1:exon
so has part: feature:859728-859805:1:exon
so has part: feature:860113-860213:1:exon
so has part: feature:860535-860627:1:exon
so has part: feature:860749-860812:1:exon
so has part: feature:860944-861084:1:exon
so has part: feature:861319-861509:1:exon
so has part: feature:862650-862687:1:exon
so has part: feature:862768-862857:1:exon
so has part: feature:863891-864099:1:exon
so has part: feature:864188-864325:1:exon
so has part: feature:868296-868433:1:exon
so has part: feature:868515-868649:1:exon
so has part: feature:868827-868832:1:exon

XP_012642793.1
type: Protein
SIO_000068: ncbiprotein

position:868832:1
position: 868832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853857-853908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:858432-858527:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859501-859613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859728-859805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860113-860213:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860535-860627:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:860749-860812:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:860944-861084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:861319-861509:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:862650-862687:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:862768-862857:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:863891-864099:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:864188-864325:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:868296-868433:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:868515-868649:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:868827-868832:1:exon

LOC105883857
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105883857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(870470..875771)
location: region:870470-875771:-1
so has part: feature:870470-875771:-1:exon
subclass of: SO_0000010

105883857
type: Gene
SIO_000068: ncbigene

position:870470:-1
position: 870470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875771:-1
position: 875771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870470-875771:-1:exon

LOC105883857
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: LOC105883857
product: uncharacterized LOC105883857, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159950.2
SIO_010081: LOC105883857
so part of: LOC105883857
location: complement(join(870470..870538,871209..871320,874551..875771))
location: region:870470-875771:-1
so has part: feature:874551-875771:-1:exon
so has part: feature:871209-871320:-1:exon
so has part: feature:870470-870538:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:874551-875771:-1:exon

position:874551:-1
position: 874551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:871209-871320:-1:exon

position:871209:-1
position: 871209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871320:-1
position: 871320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:870470-870538:-1:exon

position:870538:-1
position: 870538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105883857
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105883857
product: uncharacterized LOC105883857, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787350.2
SIO_010081: LOC105883857
subclass of: SO_0000673
so part of: LOC105883857
location: complement(join(870778..871320,874551..875771))
location: region:870778-875771:-1
so has part: feature:874551-875771:-1:exon
so has part: feature:870778-871320:-1:exon

position:870778:-1
position: 870778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874551-875771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870778-871320:-1:exon

LOC105883857
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105883857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105883857
translation: MPQVLVASGAQDTSLDEKPKGGCGPWHAGSEACEWGWHLLSQGWASWQEGPFSLQHAARRRGGWEGSQRSFPLSQRPSTSQRSSPEGLSTSMWCWPPCRPTCTPPSTVGALCSDKKGALVVQMTGWGAPVWPGLQLPWVSNVLSSAPAHSAPTPPRGTVARSAERTHRRPVPGRQEEGCELLASALVRNIASGQPARVRPCRGWAGGGSGWCPRWDGRRRPQTESPRLLLPRRAQGLGRPHVCSHPRSPAATAAATWEPARAHGPLAPAPTSDVPWRQAGTPRLAGEATLPPPRTPLPQCPRAAAPRGGREGEGRRRLAVALLGSATPLLWQPFPSEVVAARARLWLPRSPSLRCGLGEGLPAARAGVRAGDPGPGRRAAHSRGFSPGTVFRPRSVPARPAAAETGACAQPT
SIO_010081: LOC105883857
subclass of: SO_0000673
so part of: LOC105883857
location: complement(join(871294..871320,874551..875762))
location: region:871294-875762:-1
so has part: feature:874551-875762:-1:exon
so has part: feature:871294-871320:-1:exon

XP_012642804.2
type: Protein
SIO_000068: ncbiprotein

position:871294:-1
position: 871294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875762:-1
position: 875762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874551-875762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:871294-871320:-1:exon

PRR7
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: PRR7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 874376..883472
location: region:874376-883472:1
so has part: feature:874376-883472:1:exon
subclass of: SO_0000010

105883858
type: Gene
SIO_000068: ncbigene

position:874376:1
position: 874376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883472:1
position: 883472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874376-883472:1:exon

PRR7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PRR7
product: proline rich 7, synaptic, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 49 ESTs, 6 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787352.2
SIO_010081: PRR7
subclass of: SO_0000673
so part of: PRR7
location: join(874376..874542,882085..882728,882910..883472)
location: region:874376-883472:1
so has part: feature:874376-874542:1:exon
so has part: feature:882085-882728:1:exon
so has part: feature:882910-883472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:874376-874542:1:exon

position:874542:1
position: 874542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:882085-882728:1:exon

position:882085:1
position: 882085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882728:1
position: 882728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:882910-883472:1:exon

position:882910:1
position: 882910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRR7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PRR7
product: proline rich 7, synaptic, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 42 ESTs, 6 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012787351.2
SIO_010081: PRR7
subclass of: SO_0000673
so part of: PRR7
location: join(875177..875261,882085..882728,882910..883472)
location: region:875177-883472:1
so has part: feature:875177-875261:1:exon
so has part: feature:882085-882728:1:exon
so has part: feature:882910-883472:1:exon

position:875177:1
position: 875177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875177-875261:1:exon

position:875261:1
position: 875261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:882085-882728:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:882910-883472:1:exon

LOC105883826
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105883826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 877295..882290
location: region:877295-882290:1
so has part: feature:877295-882290:1:exon

105883826
type: Gene
SIO_000068: ncbigene

position:877295:1
position: 877295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882290:1
position: 882290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877295-882290:1:exon

LOC105883826
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105883826
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 33% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105883826
subclass of: SO_0000673
so part of: LOC105883826
location: 877295..877343
location: region:877295-877343:1
so has part: feature:877295-877343:1:exon

position:877343:1
position: 877343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877295-877343:1:exon

LOC105883826
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105883826
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 33% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105883826
subclass of: SO_0000673
so part of: LOC105883826
location: 878903..879156
location: region:878903-879156:1
so has part: feature:878903-879156:1:exon

position:878903:1
position: 878903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879156:1
position: 879156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878903-879156:1:exon

LOC105883826
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105883826
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 33% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105883826
subclass of: SO_0000673
so part of: LOC105883826
location: 879192..879335
location: region:879192-879335:1
so has part: feature:879192-879335:1:exon

position:879192:1
position: 879192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879335:1
position: 879335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879192-879335:1:exon

LOC105883826
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105883826
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 33% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105883826
subclass of: SO_0000673
so part of: LOC105883826
location: 881385..881442
location: region:881385-881442:1
so has part: feature:881385-881442:1:exon

position:881385:1
position: 881385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881442:1
position: 881442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881385-881442:1:exon

LOC105883826
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105883826
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 33% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105883826
subclass of: SO_0000673
so part of: LOC105883826
location: 882085..882290
location: region:882085-882290:1
so has part: feature:882085-882290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:882085-882290:1:exon

PRR7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PRR7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 7
translation: MVMSQGTYTFLTCFAGFWLIWGLIVLLCCFCSFLRRRLKRRQEERLREQNLRALELEPLDLEGSLAGSPPGLAPPPPPHRSRLEAPAHAHPHVHVHPLLHHGPAQPHAHAHHHALPHPPPPHLSVPPRPWSYPRQTESDMSKPPCYEEAVLMAEPPPPYSEVLTDTRGLYRKIVTPFLSRRDSAEKQEQPPPSYKPLFLDRGYTSALHLPSAPRPAPPCPALCLQAERARRVFPSWTDSELGSREPLEHGAWRLPVSIPLFGRTTAV
SIO_010081: PRR7
subclass of: SO_0000673
so part of: PRR7
location: join(882323..882728,882910..883307)
location: region:882323-883307:1
so has part: feature:882323-882728:1:exon
so has part: feature:882910-883307:1:exon

XP_012642805.1
type: Protein
SIO_000068: ncbiprotein

position:882323:1
position: 882323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883307:1
position: 883307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882323-882728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:882910-883307:1:exon

PRR7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PRR7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 7
translation: MVMSQGTYTFLTCFAGFWLIWGLIVLLCCFCSFLRRRLKRRQEERLREQNLRALELEPLDLEGSLAGSPPGLAPPPPPHRSRLEAPAHAHPHVHVHPLLHHGPAQPHAHAHHHALPHPPPPHLSVPPRPWSYPRQTESDMSKPPCYEEAVLMAEPPPPYSEVLTDTRGLYRKIVTPFLSRRDSAEKQEQPPPSYKPLFLDRGYTSALHLPSAPRPAPPCPALCLQAERARRVFPSWTDSELGSREPLEHGAWRLPVSIPLFGRTTAV
SIO_010081: PRR7
subclass of: SO_0000673
so part of: PRR7
location: join(882323..882728,882910..883307)
location: region:882323-883307:1
so has part: feature:882323-882728:1:exon
so has part: feature:882910-883307:1:exon

XP_012642806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:882323-882728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:882910-883307:1:exon

DBN1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: DBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(883745..899510)
location: region:883745-899510:-1
so has part: feature:883745-899510:-1:exon
subclass of: SO_0000010

105883854
type: Gene
SIO_000068: ncbigene

position:883745:-1
position: 883745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899510:-1
position: 899510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883745-899510:-1:exon

DBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: DBN1
product: drebrin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 567 ESTs, 9 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012787335.2
SIO_010081: DBN1
subclass of: SO_0000673
so part of: DBN1
location: complement(join(883745..884593,884746..884848,885147..885826,886227..886397,887545..887668,887755..887814,892386..892449,892525..892676,892884..892961,893443..893589,893709..893783,893956..894068,894697..894752,899215..899510))
location: region:883745-899510:-1
so has part: feature:899215-899510:-1:exon
so has part: feature:894697-894752:-1:exon
so has part: feature:893956-894068:-1:exon
so has part: feature:893709-893783:-1:exon
so has part: feature:893443-893589:-1:exon
so has part: feature:892884-892961:-1:exon
so has part: feature:892525-892676:-1:exon
so has part: feature:892386-892449:-1:exon
so has part: feature:887755-887814:-1:exon
so has part: feature:887545-887668:-1:exon
so has part: feature:886227-886397:-1:exon
so has part: feature:885147-885826:-1:exon
so has part: feature:884746-884848:-1:exon
so has part: feature:883745-884593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:899215-899510:-1:exon

position:899215:-1
position: 899215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:894697-894752:-1:exon

position:894697:-1
position: 894697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894752:-1
position: 894752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:893956-894068:-1:exon

position:893956:-1
position: 893956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894068:-1
position: 894068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:893709-893783:-1:exon

position:893709:-1
position: 893709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893783:-1
position: 893783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:893443-893589:-1:exon

position:893443:-1
position: 893443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893589:-1
position: 893589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:892884-892961:-1:exon

position:892884:-1
position: 892884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892961:-1
position: 892961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:892525-892676:-1:exon

position:892525:-1
position: 892525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892676:-1
position: 892676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:892386-892449:-1:exon

position:892386:-1
position: 892386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892449:-1
position: 892449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:887755-887814:-1:exon

position:887755:-1
position: 887755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887814:-1
position: 887814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:887545-887668:-1:exon

position:887545:-1
position: 887545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887668:-1
position: 887668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:886227-886397:-1:exon

position:886227:-1
position: 886227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886397:-1
position: 886397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:885147-885826:-1:exon

position:885147:-1
position: 885147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885826:-1
position: 885826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:884746-884848:-1:exon

position:884746:-1
position: 884746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884848:-1
position: 884848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:883745-884593:-1:exon

position:884593:-1
position: 884593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: DBN1
product: drebrin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 550 ESTs, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012787333.2
SIO_010081: DBN1
subclass of: SO_0000673
so part of: DBN1
location: complement(join(883745..884593,884746..884848,885147..885826,886227..886397,886730..886867,887545..887668,887755..887814,892386..892449,892525..892676,892884..892961,893443..893589,893709..893783,893956..894068,894697..894752,899215..899510))
location: region:883745-899510:-1
so has part: feature:899215-899510:-1:exon
so has part: feature:894697-894752:-1:exon
so has part: feature:893956-894068:-1:exon
so has part: feature:893709-893783:-1:exon
so has part: feature:893443-893589:-1:exon
so has part: feature:892884-892961:-1:exon
so has part: feature:892525-892676:-1:exon
so has part: feature:892386-892449:-1:exon
so has part: feature:887755-887814:-1:exon
so has part: feature:887545-887668:-1:exon
so has part: feature:886730-886867:-1:exon
so has part: feature:886227-886397:-1:exon
so has part: feature:885147-885826:-1:exon
so has part: feature:884746-884848:-1:exon
so has part: feature:883745-884593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:899215-899510:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:894697-894752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893956-894068:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893709-893783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:893443-893589:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:892884-892961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892525-892676:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892386-892449:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:887755-887814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:887545-887668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:886730-886867:-1:exon

position:886730:-1
position: 886730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886867:-1
position: 886867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:886227-886397:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:885147-885826:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:884746-884848:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:883745-884593:-1:exon

DBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: DBN1
product: drebrin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 123 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787334.2
SIO_010081: DBN1
subclass of: SO_0000673
so part of: DBN1
location: complement(join(883745..884593,884746..884848,885147..885826,886227..886397,886730..886867,887545..887668,887755..887814,892386..892449,892525..892676,892884..892961,893443..893589,893709..893783,893956..894068,894697..894752,894902..895069))
location: region:883745-895069:-1
so has part: feature:894902-895069:-1:exon
so has part: feature:894697-894752:-1:exon
so has part: feature:893956-894068:-1:exon
so has part: feature:893709-893783:-1:exon
so has part: feature:893443-893589:-1:exon
so has part: feature:892884-892961:-1:exon
so has part: feature:892525-892676:-1:exon
so has part: feature:892386-892449:-1:exon
so has part: feature:887755-887814:-1:exon
so has part: feature:887545-887668:-1:exon
so has part: feature:886730-886867:-1:exon
so has part: feature:886227-886397:-1:exon
so has part: feature:885147-885826:-1:exon
so has part: feature:884746-884848:-1:exon
so has part: feature:883745-884593:-1:exon

position:895069:-1
position: 895069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:894902-895069:-1:exon

position:894902:-1
position: 894902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:894697-894752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893956-894068:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893709-893783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:893443-893589:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:892884-892961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892525-892676:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892386-892449:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:887755-887814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:887545-887668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:886730-886867:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:886227-886397:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:885147-885826:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:884746-884848:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:883745-884593:-1:exon

DBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: DBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: drebrin isoform X3
translation: MAGVSFSGHRLELLAAYEEVIREESAADWALYTYEDGSDDLKLAASGEGGLQELSGHFENQKVMYGFCSVKDSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFFQGVDVIVNASSVEDIDAGAIGQRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEELRKEEERKKALDERLRFEQERMEQERQEQEERERRYREREQQIEEHRRKQQTLEAEEAKRRLKEQSIFGDQRDEEEETQMKKSESEVEEAAAIIAQRPDNPREFFKQQERVASASAGSCEVPLPFNHRPGSHLDSHRRMAPTPIPTRSPSDSSAASTPVTEQVERALDEVTPSQPPPLPPPPLPAQETEEPSPSLDREETRAAAPPAWAGPMEEPPQAQVPPRGQGRPEEDLTFLEECPEQAVSASPMEPAAADTTVADTSVADANVADTSESAAATADTTIANNVPPTTANLINLWPGDGEGASALQAEPLTPTPSSGTEVTLAEVPLLDEAAQEPLPPVGGGCTNLLNFDELPEPPATFCDPEEEAEGEPLAAPQVPALPSAFGELEQEQEPEPEPHLLTNGETTQKEGTQASEGYFSQSQEEEFAQSEELCAKVPPPVFYNKPPEIDITCWDADPVPEEEEGFEGGD
SIO_010081: DBN1
subclass of: SO_0000673
so part of: DBN1
location: complement(join(884523..884593,884746..884848,885147..885826,886227..886397,887545..887668,887755..887814,892386..892449,892525..892676,892884..892961,893443..893589,893709..893783,893956..894068,894697..894752,899215..899300))
location: region:884523-899300:-1
so has part: feature:899215-899300:-1:exon
so has part: feature:894697-894752:-1:exon
so has part: feature:893956-894068:-1:exon
so has part: feature:893709-893783:-1:exon
so has part: feature:893443-893589:-1:exon
so has part: feature:892884-892961:-1:exon
so has part: feature:892525-892676:-1:exon
so has part: feature:892386-892449:-1:exon
so has part: feature:887755-887814:-1:exon
so has part: feature:887545-887668:-1:exon
so has part: feature:886227-886397:-1:exon
so has part: feature:885147-885826:-1:exon
so has part: feature:884746-884848:-1:exon
so has part: feature:884523-884593:-1:exon

XP_012642789.1
type: Protein
SIO_000068: ncbiprotein

position:884523:-1
position: 884523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899300:-1
position: 899300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899215-899300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:894697-894752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893956-894068:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893709-893783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:893443-893589:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:892884-892961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892525-892676:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892386-892449:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:887755-887814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:887545-887668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:886227-886397:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:885147-885826:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:884746-884848:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:884523-884593:-1:exon

DBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: DBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: drebrin isoform X1
translation: MAGVSFSGHRLELLAAYEEVIREESAADWALYTYEDGSDDLKLAASGEGGLQELSGHFENQKVMYGFCSVKDSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFFQGVDVIVNASSVEDIDAGAIGQRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEELRKEEERKKALDERLRFEQERMEQERQEQEERERRYREREQQIEEHRRKQQTLEAEEAKRRLKEQSIFGDQRDEEEETQMKKSESEVEEAAAIIAQRPDNPREFFKQQERVASASAGSCEVPLPFNHRPGRPYCPFIKASDSGPSSSSSSSSSPPRTPFPYITCHRTPNLSSSLPCSHLDSHRRMAPTPIPTRSPSDSSAASTPVTEQVERALDEVTPSQPPPLPPPPLPAQETEEPSPSLDREETRAAAPPAWAGPMEEPPQAQVPPRGQGRPEEDLTFLEECPEQAVSASPMEPAAADTTVADTSVADANVADTSESAAATADTTIANNVPPTTANLINLWPGDGEGASALQAEPLTPTPSSGTEVTLAEVPLLDEAAQEPLPPVGGGCTNLLNFDELPEPPATFCDPEEEAEGEPLAAPQVPALPSAFGELEQEQEPEPEPHLLTNGETTQKEGTQASEGYFSQSQEEEFAQSEELCAKVPPPVFYNKPPEIDITCWDADPVPEEEEGFEGGD
SIO_010081: DBN1
subclass of: SO_0000673
so part of: DBN1
location: complement(join(884523..884593,884746..884848,885147..885826,886227..886397,886730..886867,887545..887668,887755..887814,892386..892449,892525..892676,892884..892961,893443..893589,893709..893783,893956..894068,894697..894752,899215..899300))
location: region:884523-899300:-1
so has part: feature:899215-899300:-1:exon
so has part: feature:894697-894752:-1:exon
so has part: feature:893956-894068:-1:exon
so has part: feature:893709-893783:-1:exon
so has part: feature:893443-893589:-1:exon
so has part: feature:892884-892961:-1:exon
so has part: feature:892525-892676:-1:exon
so has part: feature:892386-892449:-1:exon
so has part: feature:887755-887814:-1:exon
so has part: feature:887545-887668:-1:exon
so has part: feature:886730-886867:-1:exon
so has part: feature:886227-886397:-1:exon
so has part: feature:885147-885826:-1:exon
so has part: feature:884746-884848:-1:exon
so has part: feature:884523-884593:-1:exon

XP_012642787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:899215-899300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:894697-894752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893956-894068:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893709-893783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:893443-893589:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:892884-892961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892525-892676:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892386-892449:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:887755-887814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:887545-887668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:886730-886867:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:886227-886397:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:885147-885826:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:884746-884848:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884523-884593:-1:exon

DBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: DBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: drebrin isoform X2
translation: MKWALYTYEDGSDDLKLAASGEGGLQELSGHFENQKVMYGFCSVKDSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFFQGVDVIVNASSVEDIDAGAIGQRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEELRKEEERKKALDERLRFEQERMEQERQEQEERERRYREREQQIEEHRRKQQTLEAEEAKRRLKEQSIFGDQRDEEEETQMKKSESEVEEAAAIIAQRPDNPREFFKQQERVASASAGSCEVPLPFNHRPGRPYCPFIKASDSGPSSSSSSSSSPPRTPFPYITCHRTPNLSSSLPCSHLDSHRRMAPTPIPTRSPSDSSAASTPVTEQVERALDEVTPSQPPPLPPPPLPAQETEEPSPSLDREETRAAAPPAWAGPMEEPPQAQVPPRGQGRPEEDLTFLEECPEQAVSASPMEPAAADTTVADTSVADANVADTSESAAATADTTIANNVPPTTANLINLWPGDGEGASALQAEPLTPTPSSGTEVTLAEVPLLDEAAQEPLPPVGGGCTNLLNFDELPEPPATFCDPEEEAEGEPLAAPQVPALPSAFGELEQEQEPEPEPHLLTNGETTQKEGTQASEGYFSQSQEEEFAQSEELCAKVPPPVFYNKPPEIDITCWDADPVPEEEEGFEGGD
SIO_010081: DBN1
subclass of: SO_0000673
so part of: DBN1
location: complement(join(884523..884593,884746..884848,885147..885826,886227..886397,886730..886867,887545..887668,887755..887814,892386..892449,892525..892676,892884..892961,893443..893589,893709..893783,893956..894068,894697..894752,894902..894909))
location: region:884523-894909:-1
so has part: feature:894902-894909:-1:exon
so has part: feature:894697-894752:-1:exon
so has part: feature:893956-894068:-1:exon
so has part: feature:893709-893783:-1:exon
so has part: feature:893443-893589:-1:exon
so has part: feature:892884-892961:-1:exon
so has part: feature:892525-892676:-1:exon
so has part: feature:892386-892449:-1:exon
so has part: feature:887755-887814:-1:exon
so has part: feature:887545-887668:-1:exon
so has part: feature:886730-886867:-1:exon
so has part: feature:886227-886397:-1:exon
so has part: feature:885147-885826:-1:exon
so has part: feature:884746-884848:-1:exon
so has part: feature:884523-884593:-1:exon

XP_012642788.1
type: Protein
SIO_000068: ncbiprotein

position:894909:-1
position: 894909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:894902-894909:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:894697-894752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893956-894068:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893709-893783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:893443-893589:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:892884-892961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892525-892676:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892386-892449:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:887755-887814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:887545-887668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:886730-886867:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:886227-886397:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:885147-885826:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:884746-884848:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:884523-884593:-1:exon

PDLIM7
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: PDLIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(905326..923792)
location: region:905326-923792:-1
so has part: feature:905326-923792:-1:exon
subclass of: SO_0000010

105883856
type: Gene
SIO_000068: ncbigene

position:905326:-1
position: 905326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923792:-1
position: 923792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905326-923792:-1:exon

PDLIM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PDLIM7
product: PDZ and LIM domain 7, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 124 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_012787346.1
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(905326..905664,905764..905879,905973..906093,912865..913045,914278..914515,914677..914738,917462..917498,917593..917729,917968..917984,918831..918861,918943..919094,922661..922767,923716..923792))
location: region:905326-923792:-1
so has part: feature:923716-923792:-1:exon
so has part: feature:922661-922767:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:917968-917984:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:914677-914738:-1:exon
so has part: feature:914278-914515:-1:exon
so has part: feature:912865-913045:-1:exon
so has part: feature:905973-906093:-1:exon
so has part: feature:905764-905879:-1:exon
so has part: feature:905326-905664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:923716-923792:-1:exon

position:923716:-1
position: 923716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:922661-922767:-1:exon

position:922661:-1
position: 922661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922767:-1
position: 922767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:918943-919094:-1:exon

position:918943:-1
position: 918943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919094:-1
position: 919094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:918831-918861:-1:exon

position:918831:-1
position: 918831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918861:-1
position: 918861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:917968-917984:-1:exon

position:917968:-1
position: 917968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917984:-1
position: 917984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:917593-917729:-1:exon

position:917593:-1
position: 917593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917729:-1
position: 917729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:917462-917498:-1:exon

position:917462:-1
position: 917462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917498:-1
position: 917498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:914677-914738:-1:exon

position:914677:-1
position: 914677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914738:-1
position: 914738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:914278-914515:-1:exon

position:914278:-1
position: 914278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914515:-1
position: 914515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:912865-913045:-1:exon

position:912865:-1
position: 912865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913045:-1
position: 913045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:905973-906093:-1:exon

position:905973:-1
position: 905973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906093:-1
position: 906093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:905764-905879:-1:exon

position:905764:-1
position: 905764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905879:-1
position: 905879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:905326-905664:-1:exon

position:905664:-1
position: 905664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDLIM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PDLIM7
product: PDZ and LIM domain 7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 207 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_012787344.1
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(905326..905664,905764..905879,905973..906093,912865..913045,914278..914515,914677..914738,917462..917498,917593..917729,918308..918426,918831..918861,918943..919094,922661..922767,923716..923792))
location: region:905326-923792:-1
so has part: feature:923716-923792:-1:exon
so has part: feature:922661-922767:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:918308-918426:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:914677-914738:-1:exon
so has part: feature:914278-914515:-1:exon
so has part: feature:912865-913045:-1:exon
so has part: feature:905973-906093:-1:exon
so has part: feature:905764-905879:-1:exon
so has part: feature:905326-905664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:923716-923792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922661-922767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918308-918426:-1:exon

position:918308:-1
position: 918308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918426:-1
position: 918426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:914677-914738:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:914278-914515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912865-913045:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:905973-906093:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:905764-905879:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:905326-905664:-1:exon

PDLIM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PDLIM7
product: PDZ and LIM domain 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 124 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012787342.1
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(905326..905664,905764..905879,905973..906093,912865..913045,914278..914515,914677..914738,917462..917498,917593..917729,917964..917984,918308..918426,918831..918861,918943..919094,922661..922767,923716..923792))
location: region:905326-923792:-1
so has part: feature:923716-923792:-1:exon
so has part: feature:922661-922767:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:918308-918426:-1:exon
so has part: feature:917964-917984:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:914677-914738:-1:exon
so has part: feature:914278-914515:-1:exon
so has part: feature:912865-913045:-1:exon
so has part: feature:905973-906093:-1:exon
so has part: feature:905764-905879:-1:exon
so has part: feature:905326-905664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:923716-923792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922661-922767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918308-918426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917964-917984:-1:exon

position:917964:-1
position: 917964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:914677-914738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:914278-914515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:912865-913045:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:905973-906093:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:905764-905879:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:905326-905664:-1:exon

PDLIM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PDLIM7
product: PDZ and LIM domain 7, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 118 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012787345.2
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(905326..905664,905764..905879,905973..906093,912865..913045,914278..914515,914677..914738,917462..917498,917593..917729,917968..917984,918831..918861,918943..919094,922661..922767,922983..923155,923716..923776))
location: region:905326-923776:-1
so has part: feature:923716-923776:-1:exon
so has part: feature:922983-923155:-1:exon
so has part: feature:922661-922767:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:917968-917984:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:914677-914738:-1:exon
so has part: feature:914278-914515:-1:exon
so has part: feature:912865-913045:-1:exon
so has part: feature:905973-906093:-1:exon
so has part: feature:905764-905879:-1:exon
so has part: feature:905326-905664:-1:exon

position:923776:-1
position: 923776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923716-923776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922983-923155:-1:exon

position:922983:-1
position: 922983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923155:-1
position: 923155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:922661-922767:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917968-917984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:914677-914738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:914278-914515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:912865-913045:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:905973-906093:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:905764-905879:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:905326-905664:-1:exon

PDLIM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PDLIM7
product: PDZ and LIM domain 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 192 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012787341.2
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(905326..905664,905764..905879,905973..906093,912865..913045,914278..914515,914677..914738,917462..917498,917593..917729,918308..918426,918831..918861,918943..919094,922661..922767,922983..923155,923716..923776))
location: region:905326-923776:-1
so has part: feature:923716-923776:-1:exon
so has part: feature:922983-923155:-1:exon
so has part: feature:922661-922767:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:918308-918426:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:914677-914738:-1:exon
so has part: feature:914278-914515:-1:exon
so has part: feature:912865-913045:-1:exon
so has part: feature:905973-906093:-1:exon
so has part: feature:905764-905879:-1:exon
so has part: feature:905326-905664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:923716-923776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922983-923155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:922661-922767:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:918308-918426:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:914677-914738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:914278-914515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:912865-913045:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:905973-906093:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:905764-905879:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:905326-905664:-1:exon

PDLIM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PDLIM7
product: PDZ and LIM domain 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 112 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012787340.2
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(905326..905664,905764..905879,905973..906093,912865..913045,914278..914515,914677..914738,917462..917498,917593..917729,917964..917984,918308..918426,918831..918861,918943..919094,922661..922767,922983..923155,923716..923776))
location: region:905326-923776:-1
so has part: feature:923716-923776:-1:exon
so has part: feature:922983-923155:-1:exon
so has part: feature:922661-922767:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:918308-918426:-1:exon
so has part: feature:917964-917984:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:914677-914738:-1:exon
so has part: feature:914278-914515:-1:exon
so has part: feature:912865-913045:-1:exon
so has part: feature:905973-906093:-1:exon
so has part: feature:905764-905879:-1:exon
so has part: feature:905326-905664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:923716-923776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922983-923155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:922661-922767:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:918308-918426:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917964-917984:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:914677-914738:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:914278-914515:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:912865-913045:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:905973-906093:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:905764-905879:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:905326-905664:-1:exon

PDLIM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PDLIM7
product: PDZ and LIM domain 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 112 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012787343.1
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(905326..905664,905764..905879,905973..906093,912865..913045,914278..914515,914677..914738,917462..917498,917593..917729,917964..917984,918308..918426,918831..918861,918943..919094,922661..922767,922900..922992))
location: region:905326-922992:-1
so has part: feature:922900-922992:-1:exon
so has part: feature:922661-922767:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:918308-918426:-1:exon
so has part: feature:917964-917984:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:914677-914738:-1:exon
so has part: feature:914278-914515:-1:exon
so has part: feature:912865-913045:-1:exon
so has part: feature:905973-906093:-1:exon
so has part: feature:905764-905879:-1:exon
so has part: feature:905326-905664:-1:exon

position:922992:-1
position: 922992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922900-922992:-1:exon

position:922900:-1
position: 922900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:922661-922767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918308-918426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917964-917984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:914677-914738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:914278-914515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:912865-913045:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:905973-906093:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:905764-905879:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:905326-905664:-1:exon

PDLIM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PDLIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ and LIM domain protein 7 isoform X5
translation: MKRAPSLDAGASAMDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGGLTHIEAQNKIRACGERLSLGLSRAQPAQSKAQKVQTPAKQPLRPLAPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTESMQDPDEEHLKKSSQVPRMEAPAPASATPQEPWPGPTTPSPTSRPPWAVDPAFAERYAPDKTSTVLTRHSQPATPTPLQNRTSIVQAAAGGGAGGGSGSNGKTPVCHQCHKVIRGRYLVALGHAYHPEEFVCSQCGKVVEEGGFFEEKGAIFCPPCYDVRYAPSCAKCKKKIAGEIMHALKMTWHVHCFTCAACKTPIRNRAFYMEEGAPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCSICQINLEGKTFYSKKDKPLCKSHAFSHV
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(905578..905664,905764..905879,905973..906093,912865..913045,914278..914515,914677..914738,917462..917498,917593..917729,917968..917984,918831..918861,918943..919094,922661..922767,922983..923010))
location: region:905578-923010:-1
so has part: feature:922983-923010:-1:exon
so has part: feature:922661-922767:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:917968-917984:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:914677-914738:-1:exon
so has part: feature:914278-914515:-1:exon
so has part: feature:912865-913045:-1:exon
so has part: feature:905973-906093:-1:exon
so has part: feature:905764-905879:-1:exon
so has part: feature:905578-905664:-1:exon

XP_012642799.1
type: Protein
SIO_000068: ncbiprotein

position:905578:-1
position: 905578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923010:-1
position: 923010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922983-923010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922661-922767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917968-917984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:914677-914738:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:914278-914515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912865-913045:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:905973-906093:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:905764-905879:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:905578-905664:-1:exon

PDLIM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PDLIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ and LIM domain protein 7 isoform X2
translation: MKRAPSLDAGASAMDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGGLTHIEAQNKIRACGERLSLGLSRAQPAQSKAQKALAPAADPPRYTFAPSASLNKTARPFGAPLPADSAPQQNGQPLRPLAPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTESMQDPDEEHLKKSSQVPRMEAPAPASATPQEPWPGPTTPSPTSRPPWAVDPAFAERYAPDKTSTVLTRHSQPATPTPLQNRTSIVQAAAGGGAGGGSGSNGKTPVCHQCHKVIRGRYLVALGHAYHPEEFVCSQCGKVVEEGGFFEEKGAIFCPPCYDVRYAPSCAKCKKKIAGEIMHALKMTWHVHCFTCAACKTPIRNRAFYMEEGAPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCSICQINLEGKTFYSKKDKPLCKSHAFSHV
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(905578..905664,905764..905879,905973..906093,912865..913045,914278..914515,914677..914738,917462..917498,917593..917729,918308..918426,918831..918861,918943..919094,922661..922767,922983..923010))
location: region:905578-923010:-1
so has part: feature:922983-923010:-1:exon
so has part: feature:922661-922767:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:918308-918426:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:914677-914738:-1:exon
so has part: feature:914278-914515:-1:exon
so has part: feature:912865-913045:-1:exon
so has part: feature:905973-906093:-1:exon
so has part: feature:905764-905879:-1:exon
so has part: feature:905578-905664:-1:exon

XP_012642795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:922983-923010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922661-922767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918308-918426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:914677-914738:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:914278-914515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912865-913045:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:905973-906093:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:905764-905879:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:905578-905664:-1:exon

PDLIM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PDLIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ and LIM domain protein 7 isoform X1
translation: MKRAPSLDAGASAMDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGGLTHIEAQNKIRACGERLSLGLSRAQPAQSKAQKALAPAADPPRYTFAPSASLNKTARPFGAPLPADSAPQQNGCRPLPSQQPLRPLAPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTESMQDPDEEHLKKSSQVPRMEAPAPASATPQEPWPGPTTPSPTSRPPWAVDPAFAERYAPDKTSTVLTRHSQPATPTPLQNRTSIVQAAAGGGAGGGSGSNGKTPVCHQCHKVIRGRYLVALGHAYHPEEFVCSQCGKVVEEGGFFEEKGAIFCPPCYDVRYAPSCAKCKKKIAGEIMHALKMTWHVHCFTCAACKTPIRNRAFYMEEGAPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCSICQINLEGKTFYSKKDKPLCKSHAFSHV
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(905578..905664,905764..905879,905973..906093,912865..913045,914278..914515,914677..914738,917462..917498,917593..917729,917964..917984,918308..918426,918831..918861,918943..919094,922661..922767,922983..923010))
location: region:905578-923010:-1
so has part: feature:922983-923010:-1:exon
so has part: feature:922661-922767:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:918308-918426:-1:exon
so has part: feature:917964-917984:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:914677-914738:-1:exon
so has part: feature:914278-914515:-1:exon
so has part: feature:912865-913045:-1:exon
so has part: feature:905973-906093:-1:exon
so has part: feature:905764-905879:-1:exon
so has part: feature:905578-905664:-1:exon

XP_012642794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:922983-923010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922661-922767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918308-918426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917964-917984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:914677-914738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:914278-914515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:912865-913045:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:905973-906093:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:905764-905879:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:905578-905664:-1:exon

PDLIM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PDLIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ and LIM domain protein 7 isoform X6
translation: MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGGLTHIEAQNKIRACGERLSLGLSRAQPAQSKAQKVQTPAKQPLRPLAPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTESMQDPDEEHLKKSSQVPRMEAPAPASATPQEPWPGPTTPSPTSRPPWAVDPAFAERYAPDKTSTVLTRHSQPATPTPLQNRTSIVQAAAGGGAGGGSGSNGKTPVCHQCHKVIRGRYLVALGHAYHPEEFVCSQCGKVVEEGGFFEEKGAIFCPPCYDVRYAPSCAKCKKKIAGEIMHALKMTWHVHCFTCAACKTPIRNRAFYMEEGAPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCSICQINLEGKTFYSKKDKPLCKSHAFSHV
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(905578..905664,905764..905879,905973..906093,912865..913045,914278..914515,914677..914738,917462..917498,917593..917729,917968..917984,918831..918861,918943..919094,922661..922756))
location: region:905578-922756:-1
so has part: feature:922661-922756:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:917968-917984:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:914677-914738:-1:exon
so has part: feature:914278-914515:-1:exon
so has part: feature:912865-913045:-1:exon
so has part: feature:905973-906093:-1:exon
so has part: feature:905764-905879:-1:exon
so has part: feature:905578-905664:-1:exon

XP_012642800.1
type: Protein
SIO_000068: ncbiprotein

position:922756:-1
position: 922756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922661-922756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917968-917984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914677-914738:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:914278-914515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:912865-913045:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905973-906093:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:905764-905879:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:905578-905664:-1:exon

PDLIM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PDLIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ and LIM domain protein 7 isoform X4
translation: MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGGLTHIEAQNKIRACGERLSLGLSRAQPAQSKAQKALAPAADPPRYTFAPSASLNKTARPFGAPLPADSAPQQNGQPLRPLAPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTESMQDPDEEHLKKSSQVPRMEAPAPASATPQEPWPGPTTPSPTSRPPWAVDPAFAERYAPDKTSTVLTRHSQPATPTPLQNRTSIVQAAAGGGAGGGSGSNGKTPVCHQCHKVIRGRYLVALGHAYHPEEFVCSQCGKVVEEGGFFEEKGAIFCPPCYDVRYAPSCAKCKKKIAGEIMHALKMTWHVHCFTCAACKTPIRNRAFYMEEGAPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCSICQINLEGKTFYSKKDKPLCKSHAFSHV
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(905578..905664,905764..905879,905973..906093,912865..913045,914278..914515,914677..914738,917462..917498,917593..917729,918308..918426,918831..918861,918943..919094,922661..922756))
location: region:905578-922756:-1
so has part: feature:922661-922756:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:918308-918426:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:914677-914738:-1:exon
so has part: feature:914278-914515:-1:exon
so has part: feature:912865-913045:-1:exon
so has part: feature:905973-906093:-1:exon
so has part: feature:905764-905879:-1:exon
so has part: feature:905578-905664:-1:exon

XP_012642798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:922661-922756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918308-918426:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914677-914738:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:914278-914515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:912865-913045:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905973-906093:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:905764-905879:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:905578-905664:-1:exon

PDLIM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PDLIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ and LIM domain protein 7 isoform X3
translation: MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGGLTHIEAQNKIRACGERLSLGLSRAQPAQSKAQKALAPAADPPRYTFAPSASLNKTARPFGAPLPADSAPQQNGCRPLPSQQPLRPLAPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTESMQDPDEEHLKKSSQVPRMEAPAPASATPQEPWPGPTTPSPTSRPPWAVDPAFAERYAPDKTSTVLTRHSQPATPTPLQNRTSIVQAAAGGGAGGGSGSNGKTPVCHQCHKVIRGRYLVALGHAYHPEEFVCSQCGKVVEEGGFFEEKGAIFCPPCYDVRYAPSCAKCKKKIAGEIMHALKMTWHVHCFTCAACKTPIRNRAFYMEEGAPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCSICQINLEGKTFYSKKDKPLCKSHAFSHV
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(905578..905664,905764..905879,905973..906093,912865..913045,914278..914515,914677..914738,917462..917498,917593..917729,917964..917984,918308..918426,918831..918861,918943..919094,922661..922756))
location: region:905578-922756:-1
so has part: feature:922661-922756:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:918308-918426:-1:exon
so has part: feature:917964-917984:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:914677-914738:-1:exon
so has part: feature:914278-914515:-1:exon
so has part: feature:912865-913045:-1:exon
so has part: feature:905973-906093:-1:exon
so has part: feature:905764-905879:-1:exon
so has part: feature:905578-905664:-1:exon

XP_012642796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:922661-922756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918308-918426:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917964-917984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:914677-914738:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:914278-914515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912865-913045:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:905973-906093:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:905764-905879:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:905578-905664:-1:exon

PDLIM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PDLIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ and LIM domain protein 7 isoform X3
translation: MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGGLTHIEAQNKIRACGERLSLGLSRAQPAQSKAQKALAPAADPPRYTFAPSASLNKTARPFGAPLPADSAPQQNGCRPLPSQQPLRPLAPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTESMQDPDEEHLKKSSQVPRMEAPAPASATPQEPWPGPTTPSPTSRPPWAVDPAFAERYAPDKTSTVLTRHSQPATPTPLQNRTSIVQAAAGGGAGGGSGSNGKTPVCHQCHKVIRGRYLVALGHAYHPEEFVCSQCGKVVEEGGFFEEKGAIFCPPCYDVRYAPSCAKCKKKIAGEIMHALKMTWHVHCFTCAACKTPIRNRAFYMEEGAPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCSICQINLEGKTFYSKKDKPLCKSHAFSHV
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(905578..905664,905764..905879,905973..906093,912865..913045,914278..914515,914677..914738,917462..917498,917593..917729,917964..917984,918308..918426,918831..918861,918943..919094,922661..922756))
location: region:905578-922756:-1
so has part: feature:922661-922756:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:918308-918426:-1:exon
so has part: feature:917964-917984:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:914677-914738:-1:exon
so has part: feature:914278-914515:-1:exon
so has part: feature:912865-913045:-1:exon
so has part: feature:905973-906093:-1:exon
so has part: feature:905764-905879:-1:exon
so has part: feature:905578-905664:-1:exon

XP_012642797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:922661-922756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918308-918426:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917964-917984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:914677-914738:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:914278-914515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912865-913045:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:905973-906093:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:905764-905879:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:905578-905664:-1:exon

PDLIM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PDLIM7
product: PDZ and LIM domain 7, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 146 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_012787349.1
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(915147..915512,917462..917498,917593..917729,918308..918426,918831..918861,918943..919094,922661..922767,923716..923792))
location: region:915147-923792:-1
so has part: feature:923716-923792:-1:exon
so has part: feature:922661-922767:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:918308-918426:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:915147-915512:-1:exon

position:915147:-1
position: 915147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923716-923792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922661-922767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918308-918426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:915147-915512:-1:exon

position:915512:-1
position: 915512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDLIM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PDLIM7
product: PDZ and LIM domain 7, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 132 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012787348.1
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(915147..915512,917462..917498,917593..917729,918308..918426,918831..918861,918943..919094,922661..922767,922983..923155,923716..923769))
location: region:915147-923769:-1
so has part: feature:923716-923769:-1:exon
so has part: feature:922983-923155:-1:exon
so has part: feature:922661-922767:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:918308-918426:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:915147-915512:-1:exon

position:923769:-1
position: 923769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923716-923769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922983-923155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:922661-922767:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:918308-918426:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:915147-915512:-1:exon

PDLIM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PDLIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ and LIM domain protein 7 isoform X7
translation: MKRAPSLDAGASAMDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGGLTHIEAQNKIRACGERLSLGLSRAQPAQSKAQKALAPAADPPRYTFAPSASLNKTARPFGAPLPADSAPQQNGQPLRPLAPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTESMQDPDEEHLKKSREKYVLELQSPCYTRLRDWHHQRSAHVLNVRS
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(915416..915512,917462..917498,917593..917729,918308..918426,918831..918861,918943..919094,922661..922767,922983..923010))
location: region:915416-923010:-1
so has part: feature:922983-923010:-1:exon
so has part: feature:922661-922767:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:918308-918426:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:915416-915512:-1:exon

XP_012642802.1
type: Protein
SIO_000068: ncbiprotein

position:915416:-1
position: 915416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922983-923010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922661-922767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918308-918426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:915416-915512:-1:exon

PDLIM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PDLIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ and LIM domain protein 7 isoform X8
translation: MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGGLTHIEAQNKIRACGERLSLGLSRAQPAQSKAQKALAPAADPPRYTFAPSASLNKTARPFGAPLPADSAPQQNGQPLRPLAPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTESMQDPDEEHLKKSREKYVLELQSPCYTRLRDWHHQRSAHVLNVRS
SIO_010081: PDLIM7
subclass of: SO_0000673
so part of: PDLIM7
location: complement(join(915416..915512,917462..917498,917593..917729,918308..918426,918831..918861,918943..919094,922661..922756))
location: region:915416-922756:-1
so has part: feature:922661-922756:-1:exon
so has part: feature:918943-919094:-1:exon
so has part: feature:918831-918861:-1:exon
so has part: feature:918308-918426:-1:exon
so has part: feature:917593-917729:-1:exon
so has part: feature:917462-917498:-1:exon
so has part: feature:915416-915512:-1:exon

XP_012642803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:922661-922756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:918943-919094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918831-918861:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918308-918426:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917593-917729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917462-917498:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:915416-915512:-1:exon

DOK3
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: DOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(930808..945427)
location: region:930808-945427:-1
so has part: feature:930808-945427:-1:exon
subclass of: SO_0000010

105883859
type: Gene
SIO_000068: ncbigene

position:930808:-1
position: 930808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945427:-1
position: 945427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:930808-945427:-1:exon

DOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: DOK3
product: docking protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284839.1
SIO_010081: DOK3
subclass of: SO_0000673
so part of: DOK3
location: complement(join(930808..931714,931792..931964,932089..932188,945347..945427))
location: region:930808-945427:-1
so has part: feature:945347-945427:-1:exon
so has part: feature:932089-932188:-1:exon
so has part: feature:931792-931964:-1:exon
so has part: feature:930808-931714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:945347-945427:-1:exon

position:945347:-1
position: 945347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:932089-932188:-1:exon

position:932089:-1
position: 932089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932188:-1
position: 932188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:931792-931964:-1:exon

position:931792:-1
position: 931792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931964:-1
position: 931964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:930808-931714:-1:exon

position:931714:-1
position: 931714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: DOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: docking protein 3
translation: MEPVEVPVKDGILYQQHVKFGKGTGESASGPGPAESPRRGPVPMEENSIYSSWQEAGGFPVVVQRTEAAARCLLKGPYLLVLGRDAIQLRDRAGPQALYSWPYRFLRKFGSDKGVFSFEAGRRCDSGEGLFAFSSPRAPDICGAVAAAIARQRERLPGLTGPRPCPLPRATSLPSLDPPGELQEVPPPGPEPPTSRRLRLADSGPQSLPLLLGPAPGEPAAPVLYAVVCKRASGPPAAAEHLYENLCTPEAGPSPPDASPDPQEGPCARSPLASPVCHSSEDPTWPGPAQDSSLEAQYRRLLELELDEAGGTGRPGAQAGFKAKLVTLLSRERRKGPAPCERP
SIO_010081: DOK3
subclass of: SO_0000673
so part of: DOK3
location: complement(join(931022..931714,931792..931964,932089..932188,945347..945412))
location: region:931022-945412:-1
so has part: feature:945347-945412:-1:exon
so has part: feature:932089-932188:-1:exon
so has part: feature:931792-931964:-1:exon
so has part: feature:931022-931714:-1:exon

XP_020140428.1
type: Protein
SIO_000068: ncbiprotein

position:931022:-1
position: 931022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945412:-1
position: 945412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945347-945412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:932089-932188:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931792-931964:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:931022-931714:-1:exon

DDX41
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: DDX41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(947732..954134)
location: region:947732-954134:-1
so has part: feature:947732-954134:-1:exon
subclass of: SO_0000010

105883861
type: Gene
SIO_000068: ncbigene

position:947732:-1
position: 947732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954134:-1
position: 954134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947732-954134:-1:exon

DDX41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: DDX41
product: DEAD-box helicase 41
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 1105 ESTs, 14 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012787364.2
SIO_010081: DDX41
subclass of: SO_0000673
so part of: DDX41
location: complement(join(947732..948082,948243..948353,948468..948539,948630..948779,948915..949011,949142..949213,949490..949621,949806..949968,950829..950965,951043..951196,951329..951401,952277..952413,952531..952591,952721..952795,953225..953384,953672..953782,953873..954134))
location: region:947732-954134:-1
so has part: feature:953873-954134:-1:exon
so has part: feature:953672-953782:-1:exon
so has part: feature:953225-953384:-1:exon
so has part: feature:952721-952795:-1:exon
so has part: feature:952531-952591:-1:exon
so has part: feature:952277-952413:-1:exon
so has part: feature:951329-951401:-1:exon
so has part: feature:951043-951196:-1:exon
so has part: feature:950829-950965:-1:exon
so has part: feature:949806-949968:-1:exon
so has part: feature:949490-949621:-1:exon
so has part: feature:949142-949213:-1:exon
so has part: feature:948915-949011:-1:exon
so has part: feature:948630-948779:-1:exon
so has part: feature:948468-948539:-1:exon
so has part: feature:948243-948353:-1:exon
so has part: feature:947732-948082:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:953873-954134:-1:exon

position:953873:-1
position: 953873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:953672-953782:-1:exon

position:953672:-1
position: 953672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953782:-1
position: 953782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:953225-953384:-1:exon

position:953225:-1
position: 953225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953384:-1
position: 953384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:952721-952795:-1:exon

position:952721:-1
position: 952721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952795:-1
position: 952795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:952531-952591:-1:exon

position:952531:-1
position: 952531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952591:-1
position: 952591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:952277-952413:-1:exon

position:952277:-1
position: 952277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952413:-1
position: 952413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:951329-951401:-1:exon

position:951329:-1
position: 951329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951401:-1
position: 951401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:951043-951196:-1:exon

position:951043:-1
position: 951043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951196:-1
position: 951196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:950829-950965:-1:exon

position:950829:-1
position: 950829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950965:-1
position: 950965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:949806-949968:-1:exon

position:949806:-1
position: 949806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949968:-1
position: 949968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:949490-949621:-1:exon

position:949490:-1
position: 949490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949621:-1
position: 949621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:949142-949213:-1:exon

position:949142:-1
position: 949142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949213:-1
position: 949213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:948915-949011:-1:exon

position:948915:-1
position: 948915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949011:-1
position: 949011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:948630-948779:-1:exon

position:948630:-1
position: 948630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948779:-1
position: 948779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:948468-948539:-1:exon

position:948468:-1
position: 948468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948539:-1
position: 948539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:948243-948353:-1:exon

position:948243:-1
position: 948243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948353:-1
position: 948353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:947732-948082:-1:exon

position:948082:-1
position: 948082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDX41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: DDX41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX41
translation: MEESEPERKRARTDEVTAGGSHSEAEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAEEEQPDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYILSMSEGRHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAVLRGLKKKGIHHPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSLPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF
SIO_010081: DDX41
subclass of: SO_0000673
so part of: DDX41
location: complement(join(947946..948082,948243..948353,948468..948539,948630..948779,948915..949011,949142..949213,949490..949621,949806..949968,950829..950965,951043..951196,951329..951401,952277..952413,952531..952591,952721..952795,953225..953384,953672..953782,953873..953899))
location: region:947946-953899:-1
so has part: feature:953873-953899:-1:exon
so has part: feature:953672-953782:-1:exon
so has part: feature:953225-953384:-1:exon
so has part: feature:952721-952795:-1:exon
so has part: feature:952531-952591:-1:exon
so has part: feature:952277-952413:-1:exon
so has part: feature:951329-951401:-1:exon
so has part: feature:951043-951196:-1:exon
so has part: feature:950829-950965:-1:exon
so has part: feature:949806-949968:-1:exon
so has part: feature:949490-949621:-1:exon
so has part: feature:949142-949213:-1:exon
so has part: feature:948915-949011:-1:exon
so has part: feature:948630-948779:-1:exon
so has part: feature:948468-948539:-1:exon
so has part: feature:948243-948353:-1:exon
so has part: feature:947946-948082:-1:exon

XP_012642818.1
type: Protein
SIO_000068: ncbiprotein

position:947946:-1
position: 947946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953899:-1
position: 953899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953873-953899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:953672-953782:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:953225-953384:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:952721-952795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:952531-952591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:952277-952413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:951329-951401:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:951043-951196:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:950829-950965:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:949806-949968:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:949490-949621:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:949142-949213:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:948915-949011:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:948630-948779:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:948468-948539:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:948243-948353:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:947946-948082:-1:exon

FAM193B
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: FAM193B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(956337..991967)
location: region:956337-991967:-1
so has part: feature:956337-991967:-1:exon
subclass of: SO_0000010

105883860
type: Gene
SIO_000068: ncbigene

position:956337:-1
position: 956337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991967:-1
position: 991967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:956337-991967:-1:exon

FAM193B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FAM193B
product: family with sequence similarity 193 member B, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 86 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012787363.2
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(956337..956720,958489..958586,960021..960096,960246..961266,968743..968941,971691..972075,973604..973841,974414..974656,991661..991967))
location: region:956337-991967:-1
so has part: feature:991661-991967:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968941:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958489-958586:-1:exon
so has part: feature:956337-956720:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991967:-1:exon

position:991661:-1
position: 991661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

position:974414:-1
position: 974414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974656:-1
position: 974656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

position:973604:-1
position: 973604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973841:-1
position: 973841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:971691-972075:-1:exon

position:971691:-1
position: 971691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972075:-1
position: 972075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:968743-968941:-1:exon

position:968743:-1
position: 968743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968941:-1
position: 968941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:960246-961266:-1:exon

position:960246:-1
position: 960246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961266:-1
position: 961266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:960021-960096:-1:exon

position:960021:-1
position: 960021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960096:-1
position: 960096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:958489-958586:-1:exon

position:958489:-1
position: 958489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958586:-1
position: 958586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:956337-956720:-1:exon

position:956720:-1
position: 956720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM193B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: FAM193B
product: family with sequence similarity 193 member B, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_001159951.2
SIO_010081: FAM193B
so part of: FAM193B
location: complement(join(956337..956720,958489..958586,960021..960096,960835..961266,963843..963977,967590..967829,968743..968944,971691..972075,973604..973841,974414..974656,991661..991939))
location: region:956337-991939:-1
so has part: feature:991661-991939:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968944:-1:exon
so has part: feature:967590-967829:-1:exon
so has part: feature:963843-963977:-1:exon
so has part: feature:960835-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958489-958586:-1:exon
so has part: feature:956337-956720:-1:exon

position:991939:-1
position: 991939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971691-972075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968743-968944:-1:exon

position:968944:-1
position: 968944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:967590-967829:-1:exon

position:967590:-1
position: 967590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967829:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:963843-963977:-1:exon

position:963843:-1
position: 963843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963977:-1
position: 963977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:960835-961266:-1:exon

position:960835:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:958489-958586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:956337-956720:-1:exon

FAM193B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FAM193B
product: family with sequence similarity 193 member B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012787356.2
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(956337..956720,958489..958586,960021..960096,960246..961266,963843..963977,967590..967829,968743..968941,971691..972075,973604..973841,974414..974656,991661..991937))
location: region:956337-991937:-1
so has part: feature:991661-991937:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968941:-1:exon
so has part: feature:967590-967829:-1:exon
so has part: feature:963843-963977:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958489-958586:-1:exon
so has part: feature:956337-956720:-1:exon

position:991937:-1
position: 991937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971691-972075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968743-968941:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967590-967829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:963843-963977:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:958489-958586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:956337-956720:-1:exon

FAM193B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FAM193B
product: family with sequence similarity 193 member B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 77 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012787359.2
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(956337..956720,958489..958586,960021..960096,960246..961266,963843..963977,967590..967829,968743..968944,971691..971784,973604..973841,974414..974656,991661..991936))
location: region:956337-991936:-1
so has part: feature:991661-991936:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-971784:-1:exon
so has part: feature:968743-968944:-1:exon
so has part: feature:967590-967829:-1:exon
so has part: feature:963843-963977:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958489-958586:-1:exon
so has part: feature:956337-956720:-1:exon

position:991936:-1
position: 991936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971691-971784:-1:exon

position:971784:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:968743-968944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967590-967829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:963843-963977:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:958489-958586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:956337-956720:-1:exon

FAM193B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FAM193B
product: family with sequence similarity 193 member B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 99 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012787358.2
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(956337..956720,958489..958586,960021..960096,960246..961266,967590..967829,968743..968941,971691..972075,973604..973841,974414..974656,991661..991935))
location: region:956337-991935:-1
so has part: feature:991661-991935:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968941:-1:exon
so has part: feature:967590-967829:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958489-958586:-1:exon
so has part: feature:956337-956720:-1:exon

position:991935:-1
position: 991935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991935:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971691-972075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968743-968941:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967590-967829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:958489-958586:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:956337-956720:-1:exon

FAM193B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FAM193B
product: family with sequence similarity 193 member B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012787354.2
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(956337..956720,958489..958586,960021..960096,960246..961266,963843..963977,967590..967829,968743..968944,971691..972075,973604..973841,974414..974656,991661..991935))
location: region:956337-991935:-1
so has part: feature:991661-991935:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968944:-1:exon
so has part: feature:967590-967829:-1:exon
so has part: feature:963843-963977:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958489-958586:-1:exon
so has part: feature:956337-956720:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991935:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971691-972075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968743-968944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967590-967829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:963843-963977:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:958489-958586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:956337-956720:-1:exon

FAM193B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FAM193B
product: family with sequence similarity 193 member B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 94 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012787357.2
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(956337..956720,958489..958586,960021..960096,960246..961266,967590..967829,968743..968944,971691..972075,973604..973841,974414..974656,991661..991933))
location: region:956337-991933:-1
so has part: feature:991661-991933:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968944:-1:exon
so has part: feature:967590-967829:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958489-958586:-1:exon
so has part: feature:956337-956720:-1:exon

position:991933:-1
position: 991933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971691-972075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968743-968944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967590-967829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:958489-958586:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:956337-956720:-1:exon

FAM193B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FAM193B
product: family with sequence similarity 193 member B, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 83 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012787362.2
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(956337..956720,958489..958586,960021..960096,960246..961266,968743..968944,971691..972075,973604..973841,974414..974656,991661..991932))
location: region:956337-991932:-1
so has part: feature:991661-991932:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968944:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958489-958586:-1:exon
so has part: feature:956337-956720:-1:exon

position:991932:-1
position: 991932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991932:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971691-972075:-1:exon

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SIO_000300: 5
SIO_000628: feature:968743-968944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:958489-958586:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:956337-956720:-1:exon

FAM193B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FAM193B
product: family with sequence similarity 193 member B, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_012787360.1
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(956337..956720,958489..958586,960021..960096,960246..961266,963843..963977,967590..967829,968743..968944,971691..972075,973604..973841,974414..974656,990573..991048,991661..991751))
location: region:956337-991751:-1
so has part: feature:991661-991751:-1:exon
so has part: feature:990573-991048:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968944:-1:exon
so has part: feature:967590-967829:-1:exon
so has part: feature:963843-963977:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958489-958586:-1:exon
so has part: feature:956337-956720:-1:exon

position:991751:-1
position: 991751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991751:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:990573-991048:-1:exon

position:990573:-1
position: 990573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991048:-1
position: 991048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:973604-973841:-1:exon

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SIO_000300: 5
SIO_000628: feature:971691-972075:-1:exon

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SIO_000300: 6
SIO_000628: feature:968743-968944:-1:exon

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SIO_000300: 7
SIO_000628: feature:967590-967829:-1:exon

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SIO_000300: 8
SIO_000628: feature:963843-963977:-1:exon

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SIO_000300: 9
SIO_000628: feature:960246-961266:-1:exon

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SIO_000300: 10
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:958489-958586:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:956337-956720:-1:exon

FAM193B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FAM193B
product: family with sequence similarity 193 member B, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_012787361.2
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(956337..956720,958489..958586,960021..960096,960246..961266,963843..963977,967590..967829,968743..968944,971691..972075,973604..973841,974414..974656,990573..991640))
location: region:956337-991640:-1
so has part: feature:990573-991640:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968944:-1:exon
so has part: feature:967590-967829:-1:exon
so has part: feature:963843-963977:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958489-958586:-1:exon
so has part: feature:956337-956720:-1:exon

position:991640:-1
position: 991640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:990573-991640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971691-972075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968743-968944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967590-967829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:963843-963977:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:958489-958586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:956337-956720:-1:exon

FAM193B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FAM193B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM193B isoform X5
translation: MTRRRSRPSGGAGRRERARAVGPQKPQAPEPPPPPPCLEAGAGAGPPEVPAEPDRDGPREEDEPNLAPGPQVPLAASHSLQTCCLLCHRERKGWEEGPSHNGLVLQGEKLPPDFMPKLVKNLLGEMPLWVCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGGDSHLSSSSSSSSSSSSSSSSCHGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGCGHPCSGHCGGHCSGPLLPPPSSQPLPSTHSRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQRDGKFCDCCYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELPMKGGALGGIPGEPAVDHRDVDELLEFINSKEPKVPNSARAAKRARHKLKKKLMAPPSTLFLNQNHGHHPGDVHHSDQEQRTLELDHGLKLSSATLAEKEKAQLAADTLKQVNSVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGASEPEPQSLLPSNLSGSSEQRPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRAPPPGIIPENGLVRRLSTVPNLSRVIWVKTPKPGNPGSEEPSPKEVPSCKQELPEAVASCGKPRKGKRQGSQTKKSEVSLAPRAPVSLEALSAKGQSPGPKQPGKVPEPPKVGTCAEAGVGSRGSQPGPGWSGSPKTEKEKGSSWRNWPGEAKARPPEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPASSLDDVFLPKDMDGVEMDETDREVEYFKRFCLDSAKQTRQKVAVNWTNFSLKKTTPSTAQ
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(958490..958586,960021..960096,960246..961266,963843..963977,967590..967829,968743..968944,971691..971784,973604..973841,974414..974656,991661..991873))
location: region:958490-991873:-1
so has part: feature:991661-991873:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-971784:-1:exon
so has part: feature:968743-968944:-1:exon
so has part: feature:967590-967829:-1:exon
so has part: feature:963843-963977:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958490-958586:-1:exon

XP_012642813.1
type: Protein
SIO_000068: ncbiprotein

position:958490:-1
position: 958490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991873:-1
position: 991873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971691-971784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968743-968944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967590-967829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:963843-963977:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:958490-958586:-1:exon

FAM193B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FAM193B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM193B isoform X8
translation: MTRRRSRPSGGAGRRERARAVGPQKPQAPEPPPPPPCLEAGAGAGPPEVPAEPDRDGPREEDEPNLAPGPQVPLAASHSLQTCCLLCHRERKGWEEGPSHNGLVLQGEKLPPDFMPKLVKNLLGEMPLWVCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGGDSHLSSSSSSSSSSSSSSSSCHGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPILEHHQHSDLTAPPNSPTGHHPQPASLTPSHPGSCGSPPHPHLLPATPAAPFPAQASECPVAAAAPQTPGSCQSPHLPSTSMPLLKMPPPFSGCGHPCSGHCGGHCSGPLLPPPSSQPLPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQRDGKFCDCCYCEFFGHNAEKEKAQLAADTLKQVNSVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGASEPEPQSLLPSNLSGSSEQRPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRAPPPGIIPENGLVRRLSTVPNLSRVIWVKTPKPGNPGSEEPSPKEVPSCKQELPEAVASCGKPRKGKRQGSQTKKSEVSLAPRAPVSLEALSAKGQSPGPKQPGKVPEPPKVGTCAEAGVGSRGSQPGPGWSGSPKTEKEKGSSWRNWPGEAKARPPEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPASSLDDVFLPKDMDGVEMDETDREVEYFKRFCLDSAKQTRQKVAVNWTNFSLKKTTPSTAQ
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(958490..958586,960021..960096,960246..961266,968743..968941,971691..972075,973604..973841,974414..974656,991661..991873))
location: region:958490-991873:-1
so has part: feature:991661-991873:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968941:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958490-958586:-1:exon
SIO_000974: 70251602-1128-4427-8882-089628400607

XP_012642817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971691-972075:-1:exon

70251602-1128-4427-8882-089628400607
SIO_000300: 5
SIO_000628: feature:968743-968941:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:958490-958586:-1:exon

FAM193B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FAM193B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM193B isoform X4
translation: MTRRRSRPSGGAGRRERARAVGPQKPQAPEPPPPPPCLEAGAGAGPPEVPAEPDRDGPREEDEPNLAPGPQVPLAASHSLQTCCLLCHRERKGWEEGPSHNGLVLQGEKLPPDFMPKLVKNLLGEMPLWVCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGGDSHLSSSSSSSSSSSSSSSSCHGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPILEHHQHSDLTAPPNSPTGHHPQPASLTPSHPGSCGSPPHPHLLPATPAAPFPAQASECPVAAAAPQTPGSCQSPHLPSTSMPLLKMPPPFSGCGHPCSGHCGGHCSGPLLPPPSSQPLPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQRDGKFCDCCYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELPMKGGALGGIPGEPAVDHRDVDELLEFINSKEPKVPNSARAAKRARHKLKKKEKEKAQLAADTLKQVNSVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGASEPEPQSLLPSNLSGSSEQRPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRAPPPGIIPENGLVRRLSTVPNLSRVIWVKTPKPGNPGSEEPSPKEVPSCKQELPEAVASCGKPRKGKRQGSQTKKSEVSLAPRAPVSLEALSAKGQSPGPKQPGKVPEPPKVGTCAEAGVGSRGSQPGPGWSGSPKTEKEKGSSWRNWPGEAKARPPEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPASSLDDVFLPKDMDGVEMDETDREVEYFKRFCLDSAKQTRQKVAVNWTNFSLKKTTPSTAQ
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(958490..958586,960021..960096,960246..961266,967590..967829,968743..968941,971691..972075,973604..973841,974414..974656,991661..991873))
location: region:958490-991873:-1
so has part: feature:991661-991873:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968941:-1:exon
so has part: feature:967590-967829:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958490-958586:-1:exon

XP_012642812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971691-972075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968743-968941:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967590-967829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:958490-958586:-1:exon

FAM193B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FAM193B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM193B isoform X2
translation: MTRRRSRPSGGAGRRERARAVGPQKPQAPEPPPPPPCLEAGAGAGPPEVPAEPDRDGPREEDEPNLAPGPQVPLAASHSLQTCCLLCHRERKGWEEGPSHNGLVLQGEKLPPDFMPKLVKNLLGEMPLWVCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGGDSHLSSSSSSSSSSSSSSSSCHGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPILEHHQHSDLTAPPNSPTGHHPQPASLTPSHPGSCGSPPHPHLLPATPAAPFPAQASECPVAAAAPQTPGSCQSPHLPSTSMPLLKMPPPFSGCGHPCSGHCGGHCSGPLLPPPSSQPLPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQRDGKFCDCCYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELPMKGGALGGIPGEPAVDHRDVDELLEFINSKEPKVPNSARAAKRARHKLKKKLMAPPSTLFLNQNHGHHPGDVHHSDQEQRTLELDHGLKLSSATLAEKEKAQLAADTLKQVNSVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGASEPEPQSLLPSNLSGSSEQRPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRAPPPGIIPENGLVRRLSTVPNLSRVIWVKTPKPGNPGSEEPSPKEVPSCKQELPEAVASCGKPRKGKRQGSQTKKSEVSLAPRAPVSLEALSAKGQSPGPKQPGKVPEPPKVGTCAEAGVGSRGSQPGPGWSGSPKTEKEKGSSWRNWPGEAKARPPEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPASSLDDVFLPKDMDGVEMDETDREVEYFKRFCLDSAKQTRQKVAVNWTNFSLKKTTPSTAQ
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(958490..958586,960021..960096,960246..961266,963843..963977,967590..967829,968743..968941,971691..972075,973604..973841,974414..974656,991661..991873))
location: region:958490-991873:-1
so has part: feature:991661-991873:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968941:-1:exon
so has part: feature:967590-967829:-1:exon
so has part: feature:963843-963977:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958490-958586:-1:exon

XP_012642810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971691-972075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968743-968941:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967590-967829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:963843-963977:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:958490-958586:-1:exon

FAM193B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FAM193B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM193B isoform X7
translation: MTRRRSRPSGGAGRRERARAVGPQKPQAPEPPPPPPCLEAGAGAGPPEVPAEPDRDGPREEDEPNLAPGPQVPLAASHSLQTCCLLCHRERKGWEEGPSHNGLVLQGEKLPPDFMPKLVKNLLGEMPLWVCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGGDSHLSSSSSSSSSSSSSSSSCHGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPILEHHQHSDLTAPPNSPTGHHPQPASLTPSHPGSCGSPPHPHLLPATPAAPFPAQASECPVAAAAPQTPGSCQSPHLPSTSMPLLKMPPPFSGCGHPCSGHCGGHCSGPLLPPPSSQPLPSTHSRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQRDGKFCDCCYCEFFGHNAEKEKAQLAADTLKQVNSVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGASEPEPQSLLPSNLSGSSEQRPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRAPPPGIIPENGLVRRLSTVPNLSRVIWVKTPKPGNPGSEEPSPKEVPSCKQELPEAVASCGKPRKGKRQGSQTKKSEVSLAPRAPVSLEALSAKGQSPGPKQPGKVPEPPKVGTCAEAGVGSRGSQPGPGWSGSPKTEKEKGSSWRNWPGEAKARPPEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPASSLDDVFLPKDMDGVEMDETDREVEYFKRFCLDSAKQTRQKVAVNWTNFSLKKTTPSTAQ
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(958490..958586,960021..960096,960246..961266,968743..968944,971691..972075,973604..973841,974414..974656,991661..991873))
location: region:958490-991873:-1
so has part: feature:991661-991873:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968944:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958490-958586:-1:exon

XP_012642816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971691-972075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968743-968944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:958490-958586:-1:exon

FAM193B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FAM193B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM193B isoform X3
translation: MTRRRSRPSGGAGRRERARAVGPQKPQAPEPPPPPPCLEAGAGAGPPEVPAEPDRDGPREEDEPNLAPGPQVPLAASHSLQTCCLLCHRERKGWEEGPSHNGLVLQGEKLPPDFMPKLVKNLLGEMPLWVCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGGDSHLSSSSSSSSSSSSSSSSCHGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPILEHHQHSDLTAPPNSPTGHHPQPASLTPSHPGSCGSPPHPHLLPATPAAPFPAQASECPVAAAAPQTPGSCQSPHLPSTSMPLLKMPPPFSGCGHPCSGHCGGHCSGPLLPPPSSQPLPSTHSRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQRDGKFCDCCYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELPMKGGALGGIPGEPAVDHRDVDELLEFINSKEPKVPNSARAAKRARHKLKKKEKEKAQLAADTLKQVNSVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGASEPEPQSLLPSNLSGSSEQRPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRAPPPGIIPENGLVRRLSTVPNLSRVIWVKTPKPGNPGSEEPSPKEVPSCKQELPEAVASCGKPRKGKRQGSQTKKSEVSLAPRAPVSLEALSAKGQSPGPKQPGKVPEPPKVGTCAEAGVGSRGSQPGPGWSGSPKTEKEKGSSWRNWPGEAKARPPEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPASSLDDVFLPKDMDGVEMDETDREVEYFKRFCLDSAKQTRQKVAVNWTNFSLKKTTPSTAQ
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(958490..958586,960021..960096,960246..961266,967590..967829,968743..968944,971691..972075,973604..973841,974414..974656,991661..991873))
location: region:958490-991873:-1
so has part: feature:991661-991873:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968944:-1:exon
so has part: feature:967590-967829:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958490-958586:-1:exon

XP_012642811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971691-972075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968743-968944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967590-967829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:958490-958586:-1:exon

FAM193B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FAM193B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM193B isoform X1
translation: MTRRRSRPSGGAGRRERARAVGPQKPQAPEPPPPPPCLEAGAGAGPPEVPAEPDRDGPREEDEPNLAPGPQVPLAASHSLQTCCLLCHRERKGWEEGPSHNGLVLQGEKLPPDFMPKLVKNLLGEMPLWVCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGGDSHLSSSSSSSSSSSSSSSSCHGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPILEHHQHSDLTAPPNSPTGHHPQPASLTPSHPGSCGSPPHPHLLPATPAAPFPAQASECPVAAAAPQTPGSCQSPHLPSTSMPLLKMPPPFSGCGHPCSGHCGGHCSGPLLPPPSSQPLPSTHSRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQRDGKFCDCCYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELPMKGGALGGIPGEPAVDHRDVDELLEFINSKEPKVPNSARAAKRARHKLKKKLMAPPSTLFLNQNHGHHPGDVHHSDQEQRTLELDHGLKLSSATLAEKEKAQLAADTLKQVNSVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGASEPEPQSLLPSNLSGSSEQRPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRAPPPGIIPENGLVRRLSTVPNLSRVIWVKTPKPGNPGSEEPSPKEVPSCKQELPEAVASCGKPRKGKRQGSQTKKSEVSLAPRAPVSLEALSAKGQSPGPKQPGKVPEPPKVGTCAEAGVGSRGSQPGPGWSGSPKTEKEKGSSWRNWPGEAKARPPEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPASSLDDVFLPKDMDGVEMDETDREVEYFKRFCLDSAKQTRQKVAVNWTNFSLKKTTPSTAQ
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(958490..958586,960021..960096,960246..961266,963843..963977,967590..967829,968743..968944,971691..972075,973604..973841,974414..974656,991661..991873))
location: region:958490-991873:-1
so has part: feature:991661-991873:-1:exon
so has part: feature:974414-974656:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968944:-1:exon
so has part: feature:967590-967829:-1:exon
so has part: feature:963843-963977:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958490-958586:-1:exon

XP_012642808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:991661-991873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974414-974656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971691-972075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968743-968944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967590-967829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:963843-963977:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:958490-958586:-1:exon

FAM193B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FAM193B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM193B isoform X6
translation: MPKLVKNLLGEMPLWVCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGGDSHLSSSSSSSSSSSSSSSSCHGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPILEHHQHSDLTAPPNSPTGHHPQPASLTPSHPGSCGSPPHPHLLPATPAAPFPAQASECPVAAAAPQTPGSCQSPHLPSTSMPLLKMPPPFSGCGHPCSGHCGGHCSGPLLPPPSSQPLPSTHSRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQRDGKFCDCCYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELPMKGGALGGIPGEPAVDHRDVDELLEFINSKEPKVPNSARAAKRARHKLKKKLMAPPSTLFLNQNHGHHPGDVHHSDQEQRTLELDHGLKLSSATLAEKEKAQLAADTLKQVNSVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGASEPEPQSLLPSNLSGSSEQRPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRAPPPGIIPENGLVRRLSTVPNLSRVIWVKTPKPGNPGSEEPSPKEVPSCKQELPEAVASCGKPRKGKRQGSQTKKSEVSLAPRAPVSLEALSAKGQSPGPKQPGKVPEPPKVGTCAEAGVGSRGSQPGPGWSGSPKTEKEKGSSWRNWPGEAKARPPEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPASSLDDVFLPKDMDGVEMDETDREVEYFKRFCLDSAKQTRQKVAVNWTNFSLKKTTPSTAQ
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(958490..958586,960021..960096,960246..961266,963843..963977,967590..967829,968743..968944,971691..972075,973604..973841,974414..974527))
location: region:958490-974527:-1
so has part: feature:974414-974527:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968944:-1:exon
so has part: feature:967590-967829:-1:exon
so has part: feature:963843-963977:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958490-958586:-1:exon

XP_012642814.1
type: Protein
SIO_000068: ncbiprotein

position:974527:-1
position: 974527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:974414-974527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:971691-972075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968743-968944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:967590-967829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:963843-963977:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:958490-958586:-1:exon

FAM193B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FAM193B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM193B isoform X6
translation: MPKLVKNLLGEMPLWVCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGGDSHLSSSSSSSSSSSSSSSSCHGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPILEHHQHSDLTAPPNSPTGHHPQPASLTPSHPGSCGSPPHPHLLPATPAAPFPAQASECPVAAAAPQTPGSCQSPHLPSTSMPLLKMPPPFSGCGHPCSGHCGGHCSGPLLPPPSSQPLPSTHSRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQRDGKFCDCCYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELPMKGGALGGIPGEPAVDHRDVDELLEFINSKEPKVPNSARAAKRARHKLKKKLMAPPSTLFLNQNHGHHPGDVHHSDQEQRTLELDHGLKLSSATLAEKEKAQLAADTLKQVNSVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGASEPEPQSLLPSNLSGSSEQRPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRAPPPGIIPENGLVRRLSTVPNLSRVIWVKTPKPGNPGSEEPSPKEVPSCKQELPEAVASCGKPRKGKRQGSQTKKSEVSLAPRAPVSLEALSAKGQSPGPKQPGKVPEPPKVGTCAEAGVGSRGSQPGPGWSGSPKTEKEKGSSWRNWPGEAKARPPEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPASSLDDVFLPKDMDGVEMDETDREVEYFKRFCLDSAKQTRQKVAVNWTNFSLKKTTPSTAQ
SIO_010081: FAM193B
subclass of: SO_0000673
so part of: FAM193B
location: complement(join(958490..958586,960021..960096,960246..961266,963843..963977,967590..967829,968743..968944,971691..972075,973604..973841,974414..974527))
location: region:958490-974527:-1
so has part: feature:974414-974527:-1:exon
so has part: feature:973604-973841:-1:exon
so has part: feature:971691-972075:-1:exon
so has part: feature:968743-968944:-1:exon
so has part: feature:967590-967829:-1:exon
so has part: feature:963843-963977:-1:exon
so has part: feature:960246-961266:-1:exon
so has part: feature:960021-960096:-1:exon
so has part: feature:958490-958586:-1:exon

XP_012642815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:974414-974527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:973604-973841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:971691-972075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968743-968944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:967590-967829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:963843-963977:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960246-961266:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960021-960096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:958490-958586:-1:exon

TMED9
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TMED9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1000722..1004576
location: region:1000722-1004576:1
so has part: feature:1000722-1004576:1:exon
subclass of: SO_0000010

105883863
type: Gene
SIO_000068: ncbigene

position:1000722:1
position: 1000722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004576:1
position: 1004576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000722-1004576:1:exon

TMED9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TMED9
product: transmembrane p24 trafficking protein 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 696 ESTs, 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012787370.2
SIO_010081: TMED9
subclass of: SO_0000673
so part of: TMED9
location: join(1000722..1000977,1001166..1001266,1002162..1002287,1002642..1002788,1003723..1004576)
location: region:1000722-1004576:1
so has part: feature:1000722-1000977:1:exon
so has part: feature:1001166-1001266:1:exon
so has part: feature:1002162-1002287:1:exon
so has part: feature:1002642-1002788:1:exon
so has part: feature:1003723-1004576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1000722-1000977:1:exon

position:1000977:1
position: 1000977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1001166-1001266:1:exon

position:1001166:1
position: 1001166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001266:1
position: 1001266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1002162-1002287:1:exon

position:1002162:1
position: 1002162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002287:1
position: 1002287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1002642-1002788:1:exon

position:1002642:1
position: 1002642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002788:1
position: 1002788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1003723-1004576:1:exon

position:1003723:1
position: 1003723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMED9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TMED9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane emp24 domain-containing protein 9
translation: MAAERGVRGVRPPPGPRLGGMMRTLLLLLLWFAARGTALYFHIGETEKKCFIEEIPDETMVIGNYRTQLYDKQREEYQPATPGLGMFVEVKDPEDKVILARQYGSEGRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLRVHLDIQVGEHANDYAEIAAKDKLSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSILQTLILVAIGVWQMRHLKSFFEAKKLV
SIO_010081: TMED9
subclass of: SO_0000673
so part of: TMED9
location: join(1000791..1000977,1001166..1001266,1002162..1002287,1002642..1002788,1003723..1003872)
location: region:1000791-1003872:1
so has part: feature:1000791-1000977:1:exon
so has part: feature:1001166-1001266:1:exon
so has part: feature:1002162-1002287:1:exon
so has part: feature:1002642-1002788:1:exon
so has part: feature:1003723-1003872:1:exon

XP_012642824.1
type: Protein
SIO_000068: ncbiprotein

position:1000791:1
position: 1000791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003872:1
position: 1003872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000791-1000977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1001166-1001266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002162-1002287:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1002642-1002788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1003723-1003872:1:exon

B4GALT7
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: B4GALT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1007124..1017297
location: region:1007124-1017297:1
so has part: feature:1007124-1017297:1:exon
subclass of: SO_0000010

105883862
type: Gene
SIO_000068: ncbigene

position:1007124:1
position: 1007124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017297:1
position: 1017297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1007124-1017297:1:exon

B4GALT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: B4GALT7
product: beta-1,4-galactosyltransferase 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 60 ESTs, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012787367.2
SIO_010081: B4GALT7
subclass of: SO_0000673
so part of: B4GALT7
location: join(1007124..1007270,1011344..1011706,1014016..1014241,1015198..1015281,1015934..1016038,1016527..1017297)
location: region:1007124-1017297:1
so has part: feature:1007124-1007270:1:exon
so has part: feature:1011344-1011706:1:exon
so has part: feature:1014016-1014241:1:exon
so has part: feature:1015198-1015281:1:exon
so has part: feature:1015934-1016038:1:exon
so has part: feature:1016527-1017297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1007124-1007270:1:exon

position:1007270:1
position: 1007270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1011344-1011706:1:exon

position:1011344:1
position: 1011344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011706:1
position: 1011706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1014016-1014241:1:exon

position:1014016:1
position: 1014016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014241:1
position: 1014241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1015198-1015281:1:exon

position:1015198:1
position: 1015198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015281:1
position: 1015281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1015934-1016038:1:exon

position:1015934:1
position: 1015934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016038:1
position: 1016038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1016527-1017297:1:exon

position:1016527:1
position: 1016527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

B4GALT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: B4GALT7
product: beta-1,4-galactosyltransferase 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012787366.1
SIO_010081: B4GALT7
subclass of: SO_0000673
so part of: B4GALT7
location: join(1007140..1007270,1009581..1009736,1011344..1011706,1014016..1014241,1015198..1015281,1015934..1016038,1016527..1017297)
location: region:1007140-1017297:1
so has part: feature:1007140-1007270:1:exon
so has part: feature:1009581-1009736:1:exon
so has part: feature:1011344-1011706:1:exon
so has part: feature:1014016-1014241:1:exon
so has part: feature:1015198-1015281:1:exon
so has part: feature:1015934-1016038:1:exon
so has part: feature:1016527-1017297:1:exon

position:1007140:1
position: 1007140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1007140-1007270:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1009581-1009736:1:exon

position:1009581:1
position: 1009581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009736:1
position: 1009736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1011344-1011706:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1014016-1014241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015198-1015281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1015934-1016038:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1016527-1017297:1:exon

B4GALT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: B4GALT7
product: beta-1,4-galactosyltransferase 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787368.1
SIO_010081: B4GALT7
subclass of: SO_0000673
so part of: B4GALT7
location: join(1007140..1007270,1009581..1009736,1011344..1011706,1014016..1014241,1014971..1015080,1015198..1015281)
location: region:1007140-1015281:1
so has part: feature:1007140-1007270:1:exon
so has part: feature:1009581-1009736:1:exon
so has part: feature:1011344-1011706:1:exon
so has part: feature:1014016-1014241:1:exon
so has part: feature:1014971-1015080:1:exon
so has part: feature:1015198-1015281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1007140-1007270:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1009581-1009736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011344-1011706:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1014016-1014241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014971-1015080:1:exon

position:1014971:1
position: 1014971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015080:1
position: 1015080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1015198-1015281:1:exon

B4GALT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: B4GALT7
product: beta-1,4-galactosyltransferase 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_012787369.1
SIO_010081: B4GALT7
subclass of: SO_0000673
so part of: B4GALT7
location: join(1007187..1007270,1011444..1011706,1014016..1014241,1015198..1015281,1015934..1016038,1016527..1017297)
location: region:1007187-1017297:1
so has part: feature:1007187-1007270:1:exon
so has part: feature:1011444-1011706:1:exon
so has part: feature:1014016-1014241:1:exon
so has part: feature:1015198-1015281:1:exon
so has part: feature:1015934-1016038:1:exon
so has part: feature:1016527-1017297:1:exon

position:1007187:1
position: 1007187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1007187-1007270:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1011444-1011706:1:exon

position:1011444:1
position: 1011444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1014016-1014241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015198-1015281:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015934-1016038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1016527-1017297:1:exon

B4GALT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: B4GALT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,4-galactosyltransferase 7 isoform X1
translation: MFPARRKAAQLPWEDGRRDVTLYPSPQSVPHPQKEPRGRICRGSSLPGPLAGLGSAPPQQKPLPQHSGGSRLLPGGLPRKCSVFHLFVACLLLGFFSLLWLQLSCSGDVAQAARGQGQEASGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMHRFLSRKRVPHHIYVLNQVDHFRFNRAALINVGFLESGNGTDYIAMHDVDLLPLNEALDYGFPEAGPFHVASPELHPLYHYKTYVGGILLLSKQHYQLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRVAAQKQEQFKVDREGGLSTVKYRVDSRTALSVGGAPCTVLNIMLDCDKAATPWCTLG
SIO_010081: B4GALT7
subclass of: SO_0000673
so part of: B4GALT7
location: join(1007221..1007270,1009581..1009736,1011344..1011706,1014016..1014241,1015198..1015281,1015934..1016038,1016527..1016682)
location: region:1007221-1016682:1
so has part: feature:1007221-1007270:1:exon
so has part: feature:1009581-1009736:1:exon
so has part: feature:1011344-1011706:1:exon
so has part: feature:1014016-1014241:1:exon
so has part: feature:1015198-1015281:1:exon
so has part: feature:1015934-1016038:1:exon
so has part: feature:1016527-1016682:1:exon

XP_012642820.1
type: Protein
SIO_000068: ncbiprotein

position:1007221:1
position: 1007221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016682:1
position: 1016682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1007221-1007270:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1009581-1009736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011344-1011706:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1014016-1014241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015198-1015281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1015934-1016038:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1016527-1016682:1:exon

B4GALT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: B4GALT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,4-galactosyltransferase 7 isoform X2
translation: MFPARRKAAQLPWEDGRSRLLPGGLPRKCSVFHLFVACLLLGFFSLLWLQLSCSGDVAQAARGQGQEASGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMHRFLSRKRVPHHIYVLNQVDHFRFNRAALINVGFLESGNGTDYIAMHDVDLLPLNEALDYGFPEAGPFHVASPELHPLYHYKTYVGGILLLSKQHYQLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRVAAQKQEQFKVDREGGLSTVKYRVDSRTALSVGGAPCTVLNIMLDCDKAATPWCTLG
SIO_010081: B4GALT7
subclass of: SO_0000673
so part of: B4GALT7
location: join(1007221..1007270,1011344..1011706,1014016..1014241,1015198..1015281,1015934..1016038,1016527..1016682)
location: region:1007221-1016682:1
so has part: feature:1007221-1007270:1:exon
so has part: feature:1011344-1011706:1:exon
so has part: feature:1014016-1014241:1:exon
so has part: feature:1015198-1015281:1:exon
so has part: feature:1015934-1016038:1:exon
so has part: feature:1016527-1016682:1:exon

XP_012642821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1007221-1007270:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1011344-1011706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1014016-1014241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015198-1015281:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015934-1016038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1016527-1016682:1:exon

B4GALT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: B4GALT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,4-galactosyltransferase 7 isoform X3
translation: MFPARRKAAQLPWEDGRRDVTLYPSPQSVPHPQKEPRGRICRGSSLPGPLAGLGSAPPQQKPLPQHSGGSRLLPGGLPRKCSVFHLFVACLLLGFFSLLWLQLSCSGDVAQAARGQGQEASGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMHRFLSRKRVPHHIYVLNQVDHFRFNRAALINVGFLESGNGTDYIAMHDVDLLPLNEALDYGFPEAGPFHVASPELHPLYHYKTYVGGILLLSKQHYQLDTCEVTPTAVQGPIGTGRGTGRC
SIO_010081: B4GALT7
subclass of: SO_0000673
so part of: B4GALT7
location: join(1007221..1007270,1009581..1009736,1011344..1011706,1014016..1014241,1014971..1015042)
location: region:1007221-1015042:1
so has part: feature:1007221-1007270:1:exon
so has part: feature:1009581-1009736:1:exon
so has part: feature:1011344-1011706:1:exon
so has part: feature:1014016-1014241:1:exon
so has part: feature:1014971-1015042:1:exon

XP_012642822.1
type: Protein
SIO_000068: ncbiprotein

position:1015042:1
position: 1015042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1007221-1007270:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1009581-1009736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011344-1011706:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1014016-1014241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014971-1015042:1:exon

B4GALT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: B4GALT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,4-galactosyltransferase 7 isoform X4
translation: MHRFLSRKRVPHHIYVLNQVDHFRFNRAALINVGFLESGNGTDYIAMHDVDLLPLNEALDYGFPEAGPFHVASPELHPLYHYKTYVGGILLLSKQHYQLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRVAAQKQEQFKVDREGGLSTVKYRVDSRTALSVGGAPCTVLNIMLDCDKAATPWCTLG
SIO_010081: B4GALT7
subclass of: SO_0000673
so part of: B4GALT7
location: join(1011636..1011706,1014016..1014241,1015198..1015281,1015934..1016038,1016527..1016682)
location: region:1011636-1016682:1
so has part: feature:1011636-1011706:1:exon
so has part: feature:1014016-1014241:1:exon
so has part: feature:1015198-1015281:1:exon
so has part: feature:1015934-1016038:1:exon
so has part: feature:1016527-1016682:1:exon

XP_012642823.1
type: Protein
SIO_000068: ncbiprotein

position:1011636:1
position: 1011636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1011636-1011706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1014016-1014241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015198-1015281:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015934-1016038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1016527-1016682:1:exon

N4BP3
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: N4BP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1048519..1059377
location: region:1048519-1059377:1
so has part: feature:1048519-1059377:1:exon
subclass of: SO_0000010

105883864
type: Gene
SIO_000068: ncbigene

position:1048519:1
position: 1048519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059377:1
position: 1059377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048519-1059377:1:exon

N4BP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: N4BP3
product: NEDD4 binding protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012787371.1
SIO_010081: N4BP3
subclass of: SO_0000673
so part of: N4BP3
location: join(1048519..1048628,1052464..1052526,1053256..1053603,1053799..1054320,1055029..1055283,1055387..1059377)
location: region:1048519-1059377:1
so has part: feature:1048519-1048628:1:exon
so has part: feature:1052464-1052526:1:exon
so has part: feature:1053256-1053603:1:exon
so has part: feature:1053799-1054320:1:exon
so has part: feature:1055029-1055283:1:exon
so has part: feature:1055387-1059377:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1048519-1048628:1:exon

position:1048628:1
position: 1048628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1052464-1052526:1:exon

position:1052464:1
position: 1052464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052526:1
position: 1052526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1053256-1053603:1:exon

position:1053256:1
position: 1053256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1053603:1
position: 1053603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1053799-1054320:1:exon

position:1053799:1
position: 1053799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054320:1
position: 1054320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1055029-1055283:1:exon

position:1055029:1
position: 1055029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055283:1
position: 1055283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1055387-1059377:1:exon

position:1055387:1
position: 1055387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

N4BP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: N4BP3
product: NEDD4 binding protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012787372.1
SIO_010081: N4BP3
subclass of: SO_0000673
so part of: N4BP3
location: join(1048519..1048628,1053256..1053603,1053799..1054320,1055029..1055283,1055387..1059377)
location: region:1048519-1059377:1
so has part: feature:1048519-1048628:1:exon
so has part: feature:1053256-1053603:1:exon
so has part: feature:1053799-1054320:1:exon
so has part: feature:1055029-1055283:1:exon
so has part: feature:1055387-1059377:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1048519-1048628:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1053256-1053603:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1053799-1054320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1055029-1055283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1055387-1059377:1:exon

N4BP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: N4BP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-binding protein 3
translation: MATAPVPADIAMGSVGSLLERQDFSSEELRAALAGSRGSRQPDGLLRKGLGQRELFSYLHLPKKDGKTAKRAPRNEPADYATYYREHPWAGDFSKTSLPERGRFDKCRIRPSVFKPAAGNGKGVLSMQGLAAHKGQKLWRSNGSLHTLACHPPLSPGPRASQARAQLLHALSLDEGGPEPEPSLSDSSSGGSFGRSPGTGPSPFSSSLGHLNHLGGSLDRASRSPKEAGPLAVLSCLPEPPPPYEFSCPTTEEVVAGLPETCGELKRGLGVEDGPSAFTQVLEERQRLWLSELKRLYVERLHEVAQKAERSERSLQLQLFMAQQEQRRLHKELRAQQGLGPEPRPPGTFPEADPSTRPEEEARWEVCQKTAEISLLKQQLREAQAELAQKLAEIFSLKTQLRGSRAQAQAQDTELARLREAVRSLQEQAPREEAPGSCETDDCKSRGLLGEAGGSEARDGAEQLRAELLQERLRGQEQALRFEQERRTWQEEKERVLRYQREIQGGYMDMYRRNQALEQELRALREPPTPWSPRLESSKI
SIO_010081: N4BP3
subclass of: SO_0000673
so part of: N4BP3
location: join(1053286..1053603,1053799..1054320,1055029..1055283,1055387..1055914)
location: region:1053286-1055914:1
so has part: feature:1053286-1053603:1:exon
so has part: feature:1053799-1054320:1:exon
so has part: feature:1055029-1055283:1:exon
so has part: feature:1055387-1055914:1:exon

XP_012642825.1
type: Protein
SIO_000068: ncbiprotein

position:1053286:1
position: 1053286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055914:1
position: 1055914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1053286-1053603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1053799-1054320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1055029-1055283:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1055387-1055914:1:exon

N4BP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: N4BP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-binding protein 3
translation: MATAPVPADIAMGSVGSLLERQDFSSEELRAALAGSRGSRQPDGLLRKGLGQRELFSYLHLPKKDGKTAKRAPRNEPADYATYYREHPWAGDFSKTSLPERGRFDKCRIRPSVFKPAAGNGKGVLSMQGLAAHKGQKLWRSNGSLHTLACHPPLSPGPRASQARAQLLHALSLDEGGPEPEPSLSDSSSGGSFGRSPGTGPSPFSSSLGHLNHLGGSLDRASRSPKEAGPLAVLSCLPEPPPPYEFSCPTTEEVVAGLPETCGELKRGLGVEDGPSAFTQVLEERQRLWLSELKRLYVERLHEVAQKAERSERSLQLQLFMAQQEQRRLHKELRAQQGLGPEPRPPGTFPEADPSTRPEEEARWEVCQKTAEISLLKQQLREAQAELAQKLAEIFSLKTQLRGSRAQAQAQDTELARLREAVRSLQEQAPREEAPGSCETDDCKSRGLLGEAGGSEARDGAEQLRAELLQERLRGQEQALRFEQERRTWQEEKERVLRYQREIQGGYMDMYRRNQALEQELRALREPPTPWSPRLESSKI
SIO_010081: N4BP3
subclass of: SO_0000673
so part of: N4BP3
location: join(1053286..1053603,1053799..1054320,1055029..1055283,1055387..1055914)
location: region:1053286-1055914:1
so has part: feature:1053286-1053603:1:exon
so has part: feature:1053799-1054320:1:exon
so has part: feature:1055029-1055283:1:exon
so has part: feature:1055387-1055914:1:exon

XP_012642826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1053286-1053603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1053799-1054320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1055029-1055283:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1055387-1055914:1:exon

RMND5B
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: RMND5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1063169..1076540
location: region:1063169-1076540:1
so has part: feature:1063169-1076540:1:exon
subclass of: SO_0000010

105883865
type: Gene
SIO_000068: ncbigene

position:1063169:1
position: 1063169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076540:1
position: 1076540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063169-1076540:1:exon

RMND5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RMND5B
product: required for meiotic nuclear division 5 homolog B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 188 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_020284817.1
SIO_010081: RMND5B
subclass of: SO_0000673
so part of: RMND5B
location: join(1063169..1063225,1066999..1067149,1070314..1070459,1070563..1070703,1071669..1071769,1072303..1072469,1073702..1073867,1075562..1075664,1075754..1075908,1075993..1076540)
location: region:1063169-1076540:1
so has part: feature:1063169-1063225:1:exon
so has part: feature:1066999-1067149:1:exon
so has part: feature:1070314-1070459:1:exon
so has part: feature:1070563-1070703:1:exon
so has part: feature:1071669-1071769:1:exon
so has part: feature:1072303-1072469:1:exon
so has part: feature:1073702-1073867:1:exon
so has part: feature:1075562-1075664:1:exon
so has part: feature:1075754-1075908:1:exon
so has part: feature:1075993-1076540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1063169-1063225:1:exon

position:1063225:1
position: 1063225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1066999-1067149:1:exon

position:1066999:1
position: 1066999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067149:1
position: 1067149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1070314-1070459:1:exon

position:1070314:1
position: 1070314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070459:1
position: 1070459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1070563-1070703:1:exon

position:1070563:1
position: 1070563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070703:1
position: 1070703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1071669-1071769:1:exon

position:1071669:1
position: 1071669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071769:1
position: 1071769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1072303-1072469:1:exon

position:1072303:1
position: 1072303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072469:1
position: 1072469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1073702-1073867:1:exon

position:1073702:1
position: 1073702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073867:1
position: 1073867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1075562-1075664:1:exon

position:1075562:1
position: 1075562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075664:1
position: 1075664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1075754-1075908:1:exon

position:1075754:1
position: 1075754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075908:1
position: 1075908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1075993-1076540:1:exon

position:1075993:1
position: 1075993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RMND5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RMND5B
product: required for meiotic nuclear division 5 homolog B, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 46 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012787375.1
SIO_010081: RMND5B
subclass of: SO_0000673
so part of: RMND5B
location: join(1063232..1063403,1070314..1070459,1070563..1070703,1071669..1071769,1072303..1072469,1073702..1073867,1075562..1075664,1075754..1075908,1075993..1076540)
location: region:1063232-1076540:1
so has part: feature:1063232-1063403:1:exon
so has part: feature:1070314-1070459:1:exon
so has part: feature:1070563-1070703:1:exon
so has part: feature:1071669-1071769:1:exon
so has part: feature:1072303-1072469:1:exon
so has part: feature:1073702-1073867:1:exon
so has part: feature:1075562-1075664:1:exon
so has part: feature:1075754-1075908:1:exon
so has part: feature:1075993-1076540:1:exon

position:1063232:1
position: 1063232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063232-1063403:1:exon

position:1063403:1
position: 1063403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1070314-1070459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070563-1070703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1071669-1071769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072303-1072469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1073702-1073867:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1075562-1075664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075754-1075908:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075993-1076540:1:exon

RMND5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RMND5B
product: required for meiotic nuclear division 5 homolog B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 188 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012787373.2
SIO_010081: RMND5B
subclass of: SO_0000673
so part of: RMND5B
location: join(1063315..1063403,1066999..1067149,1070314..1070459,1070563..1070703,1071669..1071769,1072303..1072469,1073702..1073867,1075562..1075664,1075754..1075908,1075993..1076540)
location: region:1063315-1076540:1
so has part: feature:1063315-1063403:1:exon
so has part: feature:1066999-1067149:1:exon
so has part: feature:1070314-1070459:1:exon
so has part: feature:1070563-1070703:1:exon
so has part: feature:1071669-1071769:1:exon
so has part: feature:1072303-1072469:1:exon
so has part: feature:1073702-1073867:1:exon
so has part: feature:1075562-1075664:1:exon
so has part: feature:1075754-1075908:1:exon
so has part: feature:1075993-1076540:1:exon

position:1063315:1
position: 1063315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063315-1063403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1066999-1067149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070314-1070459:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070563-1070703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071669-1071769:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072303-1072469:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073702-1073867:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075562-1075664:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075754-1075908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1075993-1076540:1:exon

RMND5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RMND5B
product: required for meiotic nuclear division 5 homolog B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 174 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_020284818.1
SIO_010081: RMND5B
subclass of: SO_0000673
so part of: RMND5B
location: join(1063315..1063403,1066999..1067149,1070314..1070459,1070563..1070703,1071669..1071769,1072303..1072469,1073702..1073867,1075562..1075664,1075754..1075908,1076153..1076532)
location: region:1063315-1076532:1
so has part: feature:1063315-1063403:1:exon
so has part: feature:1066999-1067149:1:exon
so has part: feature:1070314-1070459:1:exon
so has part: feature:1070563-1070703:1:exon
so has part: feature:1071669-1071769:1:exon
so has part: feature:1072303-1072469:1:exon
so has part: feature:1073702-1073867:1:exon
so has part: feature:1075562-1075664:1:exon
so has part: feature:1075754-1075908:1:exon
so has part: feature:1076153-1076532:1:exon

position:1076532:1
position: 1076532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063315-1063403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1066999-1067149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070314-1070459:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070563-1070703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071669-1071769:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072303-1072469:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073702-1073867:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075562-1075664:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075754-1075908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076153-1076532:1:exon

position:1076153:1
position: 1076153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RMND5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RMND5B
product: required for meiotic nuclear division 5 homolog B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 188 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020284816.1
SIO_010081: RMND5B
subclass of: SO_0000673
so part of: RMND5B
location: join(1063419..1063473,1066999..1067149,1070314..1070459,1070563..1070703,1071669..1071769,1072303..1072469,1073702..1073867,1075562..1075664,1075754..1075908,1075993..1076540)
location: region:1063419-1076540:1
so has part: feature:1063419-1063473:1:exon
so has part: feature:1066999-1067149:1:exon
so has part: feature:1070314-1070459:1:exon
so has part: feature:1070563-1070703:1:exon
so has part: feature:1071669-1071769:1:exon
so has part: feature:1072303-1072469:1:exon
so has part: feature:1073702-1073867:1:exon
so has part: feature:1075562-1075664:1:exon
so has part: feature:1075754-1075908:1:exon
so has part: feature:1075993-1076540:1:exon

position:1063419:1
position: 1063419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063419-1063473:1:exon

position:1063473:1
position: 1063473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1066999-1067149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070314-1070459:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070563-1070703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071669-1071769:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072303-1072469:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073702-1073867:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075562-1075664:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075754-1075908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1075993-1076540:1:exon

RMND5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RMND5B
product: required for meiotic nuclear division 5 homolog B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 188 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_020284815.1
SIO_010081: RMND5B
subclass of: SO_0000673
so part of: RMND5B
location: join(1063481..1063889,1066999..1067149,1070314..1070459,1070563..1070703,1071669..1071769,1072303..1072469,1073702..1073867,1075562..1075664,1075754..1075908,1075993..1076540)
location: region:1063481-1076540:1
so has part: feature:1063481-1063889:1:exon
so has part: feature:1066999-1067149:1:exon
so has part: feature:1070314-1070459:1:exon
so has part: feature:1070563-1070703:1:exon
so has part: feature:1071669-1071769:1:exon
so has part: feature:1072303-1072469:1:exon
so has part: feature:1073702-1073867:1:exon
so has part: feature:1075562-1075664:1:exon
so has part: feature:1075754-1075908:1:exon
so has part: feature:1075993-1076540:1:exon

position:1063481:1
position: 1063481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063481-1063889:1:exon

position:1063889:1
position: 1063889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1066999-1067149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070314-1070459:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070563-1070703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071669-1071769:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072303-1072469:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073702-1073867:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075562-1075664:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075754-1075908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1075993-1076540:1:exon

RMND5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RMND5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RMD5 homolog B isoform X2
translation: MEQCACVERELDKVLQKFLTYGQHCEQSLEELLHYVGQLRAELASAALQGTPLSATLSLVMSQCCRKIKDTVQKLASDHKDIHSSVSRVGKAIDRNFDSEICGVVSDAVWDSREKQQQILQMAIVEHLYQQGMLSVAEELCQESTLNVDLDFKQPFLELNRIVEALHAQDLGPALEWAVSHRQRLLELNSSLEFKLHRLHFIRLLAGGPEKQLEALSYARHFQPFARLHQREIQVMMGSLVYLRLGLEKSPYCHLLDNSHWAEICETFTRDACSLLGLSVESPLSVSFASGCVALPVLMNIKAVIEQRQCTGVWSHKDELPIEIELGMKCWYHSVFACPILRQQTSDSNPPIKLICGHVISRDALNKLINGGKAPG
SIO_010081: RMND5B
subclass of: SO_0000673
so part of: RMND5B
location: join(1067011..1067149,1070314..1070459,1070563..1070703,1071669..1071769,1072303..1072469,1073702..1073867,1075562..1075664,1075754..1075908,1076153..1076165)
location: region:1067011-1076165:1
so has part: feature:1067011-1067149:1:exon
so has part: feature:1070314-1070459:1:exon
so has part: feature:1070563-1070703:1:exon
so has part: feature:1071669-1071769:1:exon
so has part: feature:1072303-1072469:1:exon
so has part: feature:1073702-1073867:1:exon
so has part: feature:1075562-1075664:1:exon
so has part: feature:1075754-1075908:1:exon
so has part: feature:1076153-1076165:1:exon

XP_020140407.1
type: Protein
SIO_000068: ncbiprotein

position:1067011:1
position: 1067011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076165:1
position: 1076165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1067011-1067149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070314-1070459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070563-1070703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1071669-1071769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072303-1072469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1073702-1073867:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1075562-1075664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075754-1075908:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1076153-1076165:1:exon

RMND5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RMND5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RMD5 homolog B isoform X1
translation: MEQCACVERELDKVLQKFLTYGQHCEQSLEELLHYVGQLRAELASAALQGTPLSATLSLVMSQCCRKIKDTVQKLASDHKDIHSSVSRVGKAIDRNFDSEICGVVSDAVWDSREKQQQILQMAIVEHLYQQGMLSVAEELCQESTLNVDLDFKQPFLELNRIVEALHAQDLGPALEWAVSHRQRLLELNSSLEFKLHRLHFIRLLAGGPEKQLEALSYARHFQPFARLHQREIQVMMGSLVYLRLGLEKSPYCHLLDNSHWAEICETFTRDACSLLGLSVESPLSVSFASGCVALPVLMNIKAVIEQRQCTGVWSHKDELPIEIELGMKCWYHSVFACPILRQQTSDSNPPIKLICGHVISRDALNKLINGGKLKCPYCPMEQNPADGKRIIF
SIO_010081: RMND5B
subclass of: SO_0000673
so part of: RMND5B
location: join(1067011..1067149,1070314..1070459,1070563..1070703,1071669..1071769,1072303..1072469,1073702..1073867,1075562..1075664,1075754..1075908,1075993..1076056)
location: region:1067011-1076056:1
so has part: feature:1067011-1067149:1:exon
so has part: feature:1070314-1070459:1:exon
so has part: feature:1070563-1070703:1:exon
so has part: feature:1071669-1071769:1:exon
so has part: feature:1072303-1072469:1:exon
so has part: feature:1073702-1073867:1:exon
so has part: feature:1075562-1075664:1:exon
so has part: feature:1075754-1075908:1:exon
so has part: feature:1075993-1076056:1:exon

XP_020140404.1
type: Protein
SIO_000068: ncbiprotein

position:1076056:1
position: 1076056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1067011-1067149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070314-1070459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070563-1070703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1071669-1071769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072303-1072469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1073702-1073867:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1075562-1075664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075754-1075908:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075993-1076056:1:exon

RMND5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RMND5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RMD5 homolog B isoform X1
translation: MEQCACVERELDKVLQKFLTYGQHCEQSLEELLHYVGQLRAELASAALQGTPLSATLSLVMSQCCRKIKDTVQKLASDHKDIHSSVSRVGKAIDRNFDSEICGVVSDAVWDSREKQQQILQMAIVEHLYQQGMLSVAEELCQESTLNVDLDFKQPFLELNRIVEALHAQDLGPALEWAVSHRQRLLELNSSLEFKLHRLHFIRLLAGGPEKQLEALSYARHFQPFARLHQREIQVMMGSLVYLRLGLEKSPYCHLLDNSHWAEICETFTRDACSLLGLSVESPLSVSFASGCVALPVLMNIKAVIEQRQCTGVWSHKDELPIEIELGMKCWYHSVFACPILRQQTSDSNPPIKLICGHVISRDALNKLINGGKLKCPYCPMEQNPADGKRIIF
SIO_010081: RMND5B
subclass of: SO_0000673
so part of: RMND5B
location: join(1067011..1067149,1070314..1070459,1070563..1070703,1071669..1071769,1072303..1072469,1073702..1073867,1075562..1075664,1075754..1075908,1075993..1076056)
location: region:1067011-1076056:1
so has part: feature:1067011-1067149:1:exon
so has part: feature:1070314-1070459:1:exon
so has part: feature:1070563-1070703:1:exon
so has part: feature:1071669-1071769:1:exon
so has part: feature:1072303-1072469:1:exon
so has part: feature:1073702-1073867:1:exon
so has part: feature:1075562-1075664:1:exon
so has part: feature:1075754-1075908:1:exon
so has part: feature:1075993-1076056:1:exon

XP_020140405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1067011-1067149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070314-1070459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070563-1070703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1071669-1071769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072303-1072469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1073702-1073867:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1075562-1075664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075754-1075908:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075993-1076056:1:exon

RMND5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RMND5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RMD5 homolog B isoform X1
translation: MEQCACVERELDKVLQKFLTYGQHCEQSLEELLHYVGQLRAELASAALQGTPLSATLSLVMSQCCRKIKDTVQKLASDHKDIHSSVSRVGKAIDRNFDSEICGVVSDAVWDSREKQQQILQMAIVEHLYQQGMLSVAEELCQESTLNVDLDFKQPFLELNRIVEALHAQDLGPALEWAVSHRQRLLELNSSLEFKLHRLHFIRLLAGGPEKQLEALSYARHFQPFARLHQREIQVMMGSLVYLRLGLEKSPYCHLLDNSHWAEICETFTRDACSLLGLSVESPLSVSFASGCVALPVLMNIKAVIEQRQCTGVWSHKDELPIEIELGMKCWYHSVFACPILRQQTSDSNPPIKLICGHVISRDALNKLINGGKLKCPYCPMEQNPADGKRIIF
SIO_010081: RMND5B
subclass of: SO_0000673
so part of: RMND5B
location: join(1067011..1067149,1070314..1070459,1070563..1070703,1071669..1071769,1072303..1072469,1073702..1073867,1075562..1075664,1075754..1075908,1075993..1076056)
location: region:1067011-1076056:1
so has part: feature:1067011-1067149:1:exon
so has part: feature:1070314-1070459:1:exon
so has part: feature:1070563-1070703:1:exon
so has part: feature:1071669-1071769:1:exon
so has part: feature:1072303-1072469:1:exon
so has part: feature:1073702-1073867:1:exon
so has part: feature:1075562-1075664:1:exon
so has part: feature:1075754-1075908:1:exon
so has part: feature:1075993-1076056:1:exon

XP_020140406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1067011-1067149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070314-1070459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070563-1070703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1071669-1071769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072303-1072469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1073702-1073867:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1075562-1075664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075754-1075908:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075993-1076056:1:exon

RMND5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RMND5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RMD5 homolog B isoform X1
translation: MEQCACVERELDKVLQKFLTYGQHCEQSLEELLHYVGQLRAELASAALQGTPLSATLSLVMSQCCRKIKDTVQKLASDHKDIHSSVSRVGKAIDRNFDSEICGVVSDAVWDSREKQQQILQMAIVEHLYQQGMLSVAEELCQESTLNVDLDFKQPFLELNRIVEALHAQDLGPALEWAVSHRQRLLELNSSLEFKLHRLHFIRLLAGGPEKQLEALSYARHFQPFARLHQREIQVMMGSLVYLRLGLEKSPYCHLLDNSHWAEICETFTRDACSLLGLSVESPLSVSFASGCVALPVLMNIKAVIEQRQCTGVWSHKDELPIEIELGMKCWYHSVFACPILRQQTSDSNPPIKLICGHVISRDALNKLINGGKLKCPYCPMEQNPADGKRIIF
SIO_010081: RMND5B
subclass of: SO_0000673
so part of: RMND5B
location: join(1067011..1067149,1070314..1070459,1070563..1070703,1071669..1071769,1072303..1072469,1073702..1073867,1075562..1075664,1075754..1075908,1075993..1076056)
location: region:1067011-1076056:1
so has part: feature:1067011-1067149:1:exon
so has part: feature:1070314-1070459:1:exon
so has part: feature:1070563-1070703:1:exon
so has part: feature:1071669-1071769:1:exon
so has part: feature:1072303-1072469:1:exon
so has part: feature:1073702-1073867:1:exon
so has part: feature:1075562-1075664:1:exon
so has part: feature:1075754-1075908:1:exon
so has part: feature:1075993-1076056:1:exon

XP_012642827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1067011-1067149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070314-1070459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070563-1070703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1071669-1071769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072303-1072469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1073702-1073867:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1075562-1075664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075754-1075908:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1075993-1076056:1:exon

RMND5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RMND5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RMD5 homolog B isoform X3
translation: MSQCCRKIKDTVQKLASDHKDIHSSVSRVGKAIDRNFDSEICGVVSDAVWDSREKQQQILQMAIVEHLYQQGMLSVAEELCQESTLNVDLDFKQPFLELNRIVEALHAQDLGPALEWAVSHRQRLLELNSSLEFKLHRLHFIRLLAGGPEKQLEALSYARHFQPFARLHQREIQVMMGSLVYLRLGLEKSPYCHLLDNSHWAEICETFTRDACSLLGLSVESPLSVSFASGCVALPVLMNIKAVIEQRQCTGVWSHKDELPIEIELGMKCWYHSVFACPILRQQTSDSNPPIKLICGHVISRDALNKLINGGKLKCPYCPMEQNPADGKRIIF
SIO_010081: RMND5B
subclass of: SO_0000673
so part of: RMND5B
location: join(1070355..1070459,1070563..1070703,1071669..1071769,1072303..1072469,1073702..1073867,1075562..1075664,1075754..1075908,1075993..1076056)
location: region:1070355-1076056:1
so has part: feature:1070355-1070459:1:exon
so has part: feature:1070563-1070703:1:exon
so has part: feature:1071669-1071769:1:exon
so has part: feature:1072303-1072469:1:exon
so has part: feature:1073702-1073867:1:exon
so has part: feature:1075562-1075664:1:exon
so has part: feature:1075754-1075908:1:exon
so has part: feature:1075993-1076056:1:exon

XP_012642829.1
type: Protein
SIO_000068: ncbiprotein

position:1070355:1
position: 1070355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1070355-1070459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070563-1070703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1071669-1071769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072303-1072469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1073702-1073867:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075562-1075664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1075754-1075908:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075993-1076056:1:exon

NHP2
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: NHP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1077344..1081318)
location: region:1077344-1081318:-1
so has part: feature:1077344-1081318:-1:exon
subclass of: SO_0000010

105883867
type: Gene
SIO_000068: ncbigene

position:1077344:-1
position: 1077344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081318:-1
position: 1081318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077344-1081318:-1:exon

NHP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NHP2
product: NHP2 ribonucleoprotein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 222 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012787376.1
SIO_010081: NHP2
subclass of: SO_0000673
so part of: NHP2
location: complement(join(1077344..1077700,1078677..1078782,1080857..1080926,1081012..1081318))
location: region:1077344-1081318:-1
so has part: feature:1081012-1081318:-1:exon
so has part: feature:1080857-1080926:-1:exon
so has part: feature:1078677-1078782:-1:exon
so has part: feature:1077344-1077700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1081012-1081318:-1:exon

position:1081012:-1
position: 1081012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1080857-1080926:-1:exon

position:1080857:-1
position: 1080857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080926:-1
position: 1080926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1078677-1078782:-1:exon

position:1078677:-1
position: 1078677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078782:-1
position: 1078782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1077344-1077700:-1:exon

position:1077700:-1
position: 1077700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NHP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NHP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H/ACA ribonucleoprotein complex subunit 2
translation: MTKIKADPDGPEAPAEACCGERTYHELLVNLNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYIYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQEAYDECLEEVRALPPPL
SIO_010081: NHP2
subclass of: SO_0000673
so part of: NHP2
location: complement(join(1077575..1077700,1078677..1078782,1080857..1080926,1081012..1081171))
location: region:1077575-1081171:-1
so has part: feature:1081012-1081171:-1:exon
so has part: feature:1080857-1080926:-1:exon
so has part: feature:1078677-1078782:-1:exon
so has part: feature:1077575-1077700:-1:exon

XP_012642830.1
type: Protein
SIO_000068: ncbiprotein

position:1077575:-1
position: 1077575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081171:-1
position: 1081171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081012-1081171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080857-1080926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078677-1078782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1077575-1077700:-1:exon

HNRNPAB
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: HNRNPAB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1102002..1108141
location: region:1102002-1108141:1
so has part: feature:1102002-1108141:1:exon
subclass of: SO_0000010

105883869
type: Gene
SIO_000068: ncbigene

position:1102002:1
position: 1102002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108141:1
position: 1108141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102002-1108141:1:exon

HNRNPAB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: HNRNPAB
product: heterogeneous nuclear ribonucleoprotein A/B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 665 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012787380.1
SIO_010081: HNRNPAB
subclass of: SO_0000673
so part of: HNRNPAB
location: join(1102002..1102263,1102345..1102576,1103158..1103326,1104054..1104212,1104414..1104545,1106300..1106417,1107090..1107230,1107509..1108141)
location: region:1102002-1108141:1
so has part: feature:1102002-1102263:1:exon
so has part: feature:1102345-1102576:1:exon
so has part: feature:1103158-1103326:1:exon
so has part: feature:1104054-1104212:1:exon
so has part: feature:1104414-1104545:1:exon
so has part: feature:1106300-1106417:1:exon
so has part: feature:1107090-1107230:1:exon
so has part: feature:1107509-1108141:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102002-1102263:1:exon

position:1102263:1
position: 1102263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1102345-1102576:1:exon

position:1102345:1
position: 1102345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102576:1
position: 1102576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1103158-1103326:1:exon

position:1103158:1
position: 1103158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103326:1
position: 1103326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1104054-1104212:1:exon

position:1104054:1
position: 1104054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104212:1
position: 1104212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1104414-1104545:1:exon

position:1104414:1
position: 1104414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104545:1
position: 1104545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1106300-1106417:1:exon

position:1106300:1
position: 1106300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106417:1
position: 1106417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1107090-1107230:1:exon

position:1107090:1
position: 1107090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107230:1
position: 1107230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1107509-1108141:1:exon

position:1107509:1
position: 1107509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HNRNPAB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: HNRNPAB
product: heterogeneous nuclear ribonucleoprotein A/B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 639 ESTs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012787382.1
SIO_010081: HNRNPAB
subclass of: SO_0000673
so part of: HNRNPAB
location: join(1102002..1102263,1102345..1102576,1103158..1103326,1104054..1104212,1104414..1104545,1106300..1106417,1107509..1108141)
location: region:1102002-1108141:1
so has part: feature:1102002-1102263:1:exon
so has part: feature:1102345-1102576:1:exon
so has part: feature:1103158-1103326:1:exon
so has part: feature:1104054-1104212:1:exon
so has part: feature:1104414-1104545:1:exon
so has part: feature:1106300-1106417:1:exon
so has part: feature:1107509-1108141:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1102002-1102263:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102345-1102576:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103158-1103326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1104054-1104212:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1104414-1104545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1106300-1106417:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1107509-1108141:1:exon

HNRNPAB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: HNRNPAB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein A/B isoform X1
translation: MSEAAEEQPMETTGATENGHEAAAEGEPPAGAGGGAAAGAGGGTAAPPGGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFRDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEVYQQQQYGSGGRGNRNRGNRGSGGGGGGGGQSQSWNQGYGNYWNQGYGYQQGYGPGYGGYDYSPYGYYGYGPGYDYSQGSTNYGKSQRRGGHQNNYKPY
SIO_010081: HNRNPAB
subclass of: SO_0000673
so part of: HNRNPAB
location: join(1102368..1102576,1103158..1103326,1104054..1104212,1104414..1104545,1106300..1106417,1107090..1107230,1107509..1107579)
location: region:1102368-1107579:1
so has part: feature:1102368-1102576:1:exon
so has part: feature:1103158-1103326:1:exon
so has part: feature:1104054-1104212:1:exon
so has part: feature:1104414-1104545:1:exon
so has part: feature:1106300-1106417:1:exon
so has part: feature:1107090-1107230:1:exon
so has part: feature:1107509-1107579:1:exon

XP_012642834.1
type: Protein
SIO_000068: ncbiprotein

position:1102368:1
position: 1102368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107579:1
position: 1107579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102368-1102576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1103158-1103326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104054-1104212:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1104414-1104545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1106300-1106417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1107090-1107230:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1107509-1107579:1:exon

HNRNPAB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: HNRNPAB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein A/B isoform X2
translation: MSEAAEEQPMETTGATENGHEAAAEGEPPAGAGGGAAAGAGGGTAAPPGGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFRDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEVYQQQQYGSGGRGNRNRGNRGSGGGGGGGGQGSTNYGKSQRRGGHQNNYKPY
SIO_010081: HNRNPAB
subclass of: SO_0000673
so part of: HNRNPAB
location: join(1102368..1102576,1103158..1103326,1104054..1104212,1104414..1104545,1106300..1106417,1107509..1107579)
location: region:1102368-1107579:1
so has part: feature:1102368-1102576:1:exon
so has part: feature:1103158-1103326:1:exon
so has part: feature:1104054-1104212:1:exon
so has part: feature:1104414-1104545:1:exon
so has part: feature:1106300-1106417:1:exon
so has part: feature:1107509-1107579:1:exon

XP_012642836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1102368-1102576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1103158-1103326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104054-1104212:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1104414-1104545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1106300-1106417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1107509-1107579:1:exon

PHYKPL
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: PHYKPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1104765..1125921)
location: region:1104765-1125921:-1
so has part: feature:1104765-1125921:-1:exon
subclass of: SO_0000010

105883868
type: Gene
SIO_000068: ncbigene

position:1104765:-1
position: 1104765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125921:-1
position: 1125921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104765-1125921:-1:exon

PHYKPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PHYKPL
product: 5-phosphohydroxy-L-lysine phospho-lyase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012787377.2
SIO_010081: PHYKPL
subclass of: SO_0000673
so part of: PHYKPL
location: complement(join(1104765..1105951,1108904..1108983,1109944..1110074,1111581..1111670,1112039..1112193,1116662..1116887,1117148..1117230,1118876..1118992,1119069..1119156,1120502..1120576,1123507..1123666,1124684..1124802,1125862..1125921))
location: region:1104765-1125921:-1
so has part: feature:1125862-1125921:-1:exon
so has part: feature:1124684-1124802:-1:exon
so has part: feature:1123507-1123666:-1:exon
so has part: feature:1120502-1120576:-1:exon
so has part: feature:1119069-1119156:-1:exon
so has part: feature:1118876-1118992:-1:exon
so has part: feature:1117148-1117230:-1:exon
so has part: feature:1116662-1116887:-1:exon
so has part: feature:1112039-1112193:-1:exon
so has part: feature:1111581-1111670:-1:exon
so has part: feature:1109944-1110074:-1:exon
so has part: feature:1108904-1108983:-1:exon
so has part: feature:1104765-1105951:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125862-1125921:-1:exon

position:1125862:-1
position: 1125862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1124684-1124802:-1:exon

position:1124684:-1
position: 1124684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124802:-1
position: 1124802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1123507-1123666:-1:exon

position:1123507:-1
position: 1123507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123666:-1
position: 1123666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1120502-1120576:-1:exon

position:1120502:-1
position: 1120502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120576:-1
position: 1120576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1119069-1119156:-1:exon

position:1119069:-1
position: 1119069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119156:-1
position: 1119156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1118876-1118992:-1:exon

position:1118876:-1
position: 1118876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118992:-1
position: 1118992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1117148-1117230:-1:exon

position:1117148:-1
position: 1117148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117230:-1
position: 1117230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1116662-1116887:-1:exon

position:1116662:-1
position: 1116662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116887:-1
position: 1116887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1112039-1112193:-1:exon

position:1112039:-1
position: 1112039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112193:-1
position: 1112193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1111581-1111670:-1:exon

position:1111581:-1
position: 1111581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111670:-1
position: 1111670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1109944-1110074:-1:exon

position:1109944:-1
position: 1109944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110074:-1
position: 1110074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1108904-1108983:-1:exon

position:1108904:-1
position: 1108904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108983:-1
position: 1108983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1104765-1105951:-1:exon

position:1105951:-1
position: 1105951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHYKPL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: PHYKPL
product: 5-phosphohydroxy-L-lysine phospho-lyase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001159952.2
SIO_010081: PHYKPL
so part of: PHYKPL
location: complement(join(1104765..1105951,1108209..1108268,1108904..1108983,1109944..1110074,1111581..1111670,1112039..1112193,1116662..1116887,1117148..1117230,1118876..1118992,1119069..1119156,1120502..1120576,1123507..1123666,1124684..1124802,1125862..1125921))
location: region:1104765-1125921:-1
so has part: feature:1125862-1125921:-1:exon
so has part: feature:1124684-1124802:-1:exon
so has part: feature:1123507-1123666:-1:exon
so has part: feature:1120502-1120576:-1:exon
so has part: feature:1119069-1119156:-1:exon
so has part: feature:1118876-1118992:-1:exon
so has part: feature:1117148-1117230:-1:exon
so has part: feature:1116662-1116887:-1:exon
so has part: feature:1112039-1112193:-1:exon
so has part: feature:1111581-1111670:-1:exon
so has part: feature:1109944-1110074:-1:exon
so has part: feature:1108904-1108983:-1:exon
so has part: feature:1108209-1108268:-1:exon
so has part: feature:1104765-1105951:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125862-1125921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1124684-1124802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1123507-1123666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1120502-1120576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1119069-1119156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1118876-1118992:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1117148-1117230:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1116662-1116887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1112039-1112193:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111581-1111670:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109944-1110074:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1108904-1108983:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1108209-1108268:-1:exon

position:1108209:-1
position: 1108209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108268:-1
position: 1108268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1104765-1105951:-1:exon

PHYKPL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: PHYKPL
product: 5-phosphohydroxy-L-lysine phospho-lyase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159953.2
SIO_010081: PHYKPL
so part of: PHYKPL
location: complement(join(1104765..1105951,1108209..1108268,1108669..1108782,1108904..1108983,1109944..1110074,1111581..1111670,1112039..1112193,1116662..1116887,1117148..1117230,1118876..1118992,1119069..1119156,1120502..1120576,1123507..1123666,1124684..1124802,1125862..1125921))
location: region:1104765-1125921:-1
so has part: feature:1125862-1125921:-1:exon
so has part: feature:1124684-1124802:-1:exon
so has part: feature:1123507-1123666:-1:exon
so has part: feature:1120502-1120576:-1:exon
so has part: feature:1119069-1119156:-1:exon
so has part: feature:1118876-1118992:-1:exon
so has part: feature:1117148-1117230:-1:exon
so has part: feature:1116662-1116887:-1:exon
so has part: feature:1112039-1112193:-1:exon
so has part: feature:1111581-1111670:-1:exon
so has part: feature:1109944-1110074:-1:exon
so has part: feature:1108904-1108983:-1:exon
so has part: feature:1108669-1108782:-1:exon
so has part: feature:1108209-1108268:-1:exon
so has part: feature:1104765-1105951:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125862-1125921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1124684-1124802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1123507-1123666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1120502-1120576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1119069-1119156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1118876-1118992:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1117148-1117230:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1116662-1116887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1112039-1112193:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111581-1111670:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109944-1110074:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1108904-1108983:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1108669-1108782:-1:exon

position:1108669:-1
position: 1108669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108782:-1
position: 1108782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1108209-1108268:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1104765-1105951:-1:exon

PHYKPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PHYKPL
product: 5-phosphohydroxy-L-lysine phospho-lyase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012787379.2
SIO_010081: PHYKPL
subclass of: SO_0000673
so part of: PHYKPL
location: complement(join(1104765..1105951,1108904..1108983,1109944..1110074,1111581..1111670,1112039..1112193,1116662..1116887,1117148..1117230,1118876..1118992,1119069..1119156,1120502..1120576,1123507..1123666,1124684..1124802,1125402..1125632))
location: region:1104765-1125632:-1
so has part: feature:1125402-1125632:-1:exon
so has part: feature:1124684-1124802:-1:exon
so has part: feature:1123507-1123666:-1:exon
so has part: feature:1120502-1120576:-1:exon
so has part: feature:1119069-1119156:-1:exon
so has part: feature:1118876-1118992:-1:exon
so has part: feature:1117148-1117230:-1:exon
so has part: feature:1116662-1116887:-1:exon
so has part: feature:1112039-1112193:-1:exon
so has part: feature:1111581-1111670:-1:exon
so has part: feature:1109944-1110074:-1:exon
so has part: feature:1108904-1108983:-1:exon
so has part: feature:1104765-1105951:-1:exon

position:1125632:-1
position: 1125632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125402-1125632:-1:exon

position:1125402:-1
position: 1125402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1124684-1124802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1123507-1123666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1120502-1120576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1119069-1119156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1118876-1118992:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1117148-1117230:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1116662-1116887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1112039-1112193:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111581-1111670:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109944-1110074:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1108904-1108983:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1104765-1105951:-1:exon

PHYKPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PHYKPL
product: 5-phosphohydroxy-L-lysine phospho-lyase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787378.1
SIO_010081: PHYKPL
subclass of: SO_0000673
so part of: PHYKPL
location: complement(join(1108282..1108782,1108904..1108983,1109944..1110074,1111581..1111670,1112039..1112193,1116662..1116887,1117148..1117230,1118876..1118992,1119069..1119156,1120502..1120576,1123507..1123666,1124684..1124802,1125862..1125921))
location: region:1108282-1125921:-1
so has part: feature:1125862-1125921:-1:exon
so has part: feature:1124684-1124802:-1:exon
so has part: feature:1123507-1123666:-1:exon
so has part: feature:1120502-1120576:-1:exon
so has part: feature:1119069-1119156:-1:exon
so has part: feature:1118876-1118992:-1:exon
so has part: feature:1117148-1117230:-1:exon
so has part: feature:1116662-1116887:-1:exon
so has part: feature:1112039-1112193:-1:exon
so has part: feature:1111581-1111670:-1:exon
so has part: feature:1109944-1110074:-1:exon
so has part: feature:1108904-1108983:-1:exon
so has part: feature:1108282-1108782:-1:exon

position:1108282:-1
position: 1108282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125862-1125921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1124684-1124802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1123507-1123666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1120502-1120576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1119069-1119156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1118876-1118992:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1117148-1117230:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1116662-1116887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1112039-1112193:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111581-1111670:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109944-1110074:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1108904-1108983:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1108282-1108782:-1:exon

PHYKPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PHYKPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-phosphohydroxy-L-lysine phospho-lyase isoform X1
translation: MAAARRAKADTLALRRRLLSSSCRLFFPEDPVKIVRAHGQYMYDEQGAEYLDCINNVAHVGHCHPRVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEKLCVFYFLNSGSEANDLALRLARQYTGHQDVVVLDHAYHGHLSSLIDISPYKFRSLDGQKEWVHVAPLPDTYRGPYREDHPNPAVAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSRVAEHIHGAGGVFVADEIQVGFGRVGKHFWAFQLQGDDFIPDIVTMGKSIGNGHPVACVATTQPVARAFEVTGVEYFNTFGGSPVSCAVGLAVLEVLEKEQLQAHAAHVGSFLMELLRQQKAKHPIIGDVRGVGLFVGVDLIKDEATRTPATEEADYLVSRLKENYILLSTDGPGRNVLKFKPPMCFSLDNARHVVAKLDAILTDMEEKVRSCETLRLQP
SIO_010081: PHYKPL
subclass of: SO_0000673
so part of: PHYKPL
location: complement(join(1108934..1108983,1109944..1110074,1111581..1111670,1112039..1112193,1116662..1116887,1117148..1117230,1118876..1118992,1119069..1119156,1120502..1120576,1123507..1123666,1124684..1124802,1125862..1125920))
location: region:1108934-1125920:-1
so has part: feature:1125862-1125920:-1:exon
so has part: feature:1124684-1124802:-1:exon
so has part: feature:1123507-1123666:-1:exon
so has part: feature:1120502-1120576:-1:exon
so has part: feature:1119069-1119156:-1:exon
so has part: feature:1118876-1118992:-1:exon
so has part: feature:1117148-1117230:-1:exon
so has part: feature:1116662-1116887:-1:exon
so has part: feature:1112039-1112193:-1:exon
so has part: feature:1111581-1111670:-1:exon
so has part: feature:1109944-1110074:-1:exon
so has part: feature:1108934-1108983:-1:exon

XP_012642831.1
type: Protein
SIO_000068: ncbiprotein

position:1108934:-1
position: 1108934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125920:-1
position: 1125920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125862-1125920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1124684-1124802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1123507-1123666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1120502-1120576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1119069-1119156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1118876-1118992:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1117148-1117230:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1116662-1116887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1112039-1112193:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111581-1111670:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109944-1110074:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1108934-1108983:-1:exon

PHYKPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PHYKPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-phosphohydroxy-L-lysine phospho-lyase isoform X1
translation: MAAARRAKADTLALRRRLLSSSCRLFFPEDPVKIVRAHGQYMYDEQGAEYLDCINNVAHVGHCHPRVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEKLCVFYFLNSGSEANDLALRLARQYTGHQDVVVLDHAYHGHLSSLIDISPYKFRSLDGQKEWVHVAPLPDTYRGPYREDHPNPAVAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSRVAEHIHGAGGVFVADEIQVGFGRVGKHFWAFQLQGDDFIPDIVTMGKSIGNGHPVACVATTQPVARAFEVTGVEYFNTFGGSPVSCAVGLAVLEVLEKEQLQAHAAHVGSFLMELLRQQKAKHPIIGDVRGVGLFVGVDLIKDEATRTPATEEADYLVSRLKENYILLSTDGPGRNVLKFKPPMCFSLDNARHVVAKLDAILTDMEEKVRSCETLRLQP
SIO_010081: PHYKPL
subclass of: SO_0000673
so part of: PHYKPL
location: complement(join(1108934..1108983,1109944..1110074,1111581..1111670,1112039..1112193,1116662..1116887,1117148..1117230,1118876..1118992,1119069..1119156,1120502..1120576,1123507..1123666,1124684..1124802,1125862..1125920))
location: region:1108934-1125920:-1
so has part: feature:1125862-1125920:-1:exon
so has part: feature:1124684-1124802:-1:exon
so has part: feature:1123507-1123666:-1:exon
so has part: feature:1120502-1120576:-1:exon
so has part: feature:1119069-1119156:-1:exon
so has part: feature:1118876-1118992:-1:exon
so has part: feature:1117148-1117230:-1:exon
so has part: feature:1116662-1116887:-1:exon
so has part: feature:1112039-1112193:-1:exon
so has part: feature:1111581-1111670:-1:exon
so has part: feature:1109944-1110074:-1:exon
so has part: feature:1108934-1108983:-1:exon

XP_012642832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1125862-1125920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1124684-1124802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1123507-1123666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1120502-1120576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1119069-1119156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1118876-1118992:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1117148-1117230:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1116662-1116887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1112039-1112193:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111581-1111670:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109944-1110074:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1108934-1108983:-1:exon

PHYKPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PHYKPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-phosphohydroxy-L-lysine phospho-lyase isoform X2
translation: MYDEQGAEYLDCINNVAHVGHCHPRVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEKLCVFYFLNSGSEANDLALRLARQYTGHQDVVVLDHAYHGHLSSLIDISPYKFRSLDGQKEWVHVAPLPDTYRGPYREDHPNPAVAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSRVAEHIHGAGGVFVADEIQVGFGRVGKHFWAFQLQGDDFIPDIVTMGKSIGNGHPVACVATTQPVARAFEVTGVEYFNTFGGSPVSCAVGLAVLEVLEKEQLQAHAAHVGSFLMELLRQQKAKHPIIGDVRGVGLFVGVDLIKDEATRTPATEEADYLVSRLKENYILLSTDGPGRNVLKFKPPMCFSLDNARHVVAKLDAILTDMEEKVRSCETLRLQP
SIO_010081: PHYKPL
subclass of: SO_0000673
so part of: PHYKPL
location: complement(join(1108934..1108983,1109944..1110074,1111581..1111670,1112039..1112193,1116662..1116887,1117148..1117230,1118876..1118992,1119069..1119156,1120502..1120576,1123507..1123666,1124684..1124738))
location: region:1108934-1124738:-1
so has part: feature:1124684-1124738:-1:exon
so has part: feature:1123507-1123666:-1:exon
so has part: feature:1120502-1120576:-1:exon
so has part: feature:1119069-1119156:-1:exon
so has part: feature:1118876-1118992:-1:exon
so has part: feature:1117148-1117230:-1:exon
so has part: feature:1116662-1116887:-1:exon
so has part: feature:1112039-1112193:-1:exon
so has part: feature:1111581-1111670:-1:exon
so has part: feature:1109944-1110074:-1:exon
so has part: feature:1108934-1108983:-1:exon

XP_012642833.1
type: Protein
SIO_000068: ncbiprotein

position:1124738:-1
position: 1124738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1124684-1124738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1123507-1123666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1120502-1120576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1119069-1119156:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1118876-1118992:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1117148-1117230:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1116662-1116887:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1112039-1112193:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1111581-1111670:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1109944-1110074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1108934-1108983:-1:exon

LOC105883828
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105883828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1127481..1157547)
location: region:1127481-1157547:-1
so has part: feature:1127481-1157547:-1:exon
subclass of: SO_0000010

105883828
type: Gene
SIO_000068: ncbigene

position:1127481:-1
position: 1127481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157547:-1
position: 1157547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1127481-1157547:-1:exon

LOC105883828
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105883828
product: collagen alpha-1(XXIII) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012787280.2
SIO_010081: LOC105883828
subclass of: SO_0000673
so part of: LOC105883828
location: complement(join(1127481..1131434,1131835..1131873,1133371..1133457,1133668..1133721,1136121..1136147,1136438..1136491,1136573..1136635,1137621..1137647,1137870..1137926,1138246..1138308,1139065..1139154,1140048..1140092,1140730..1140783,1143027..1143104,1143967..1144011,1144945..1145007,1145537..1145590,1145969..1145989,1148525..1148556,1148955..1148994,1150524..1150640,1154569..1154595,1156214..1156354,1156569..1156621,1157538..1157547))
location: region:1127481-1157547:-1
so has part: feature:1157538-1157547:-1:exon
so has part: feature:1156569-1156621:-1:exon
so has part: feature:1156214-1156354:-1:exon
so has part: feature:1154569-1154595:-1:exon
so has part: feature:1150524-1150640:-1:exon
so has part: feature:1148955-1148994:-1:exon
so has part: feature:1148525-1148556:-1:exon
so has part: feature:1145969-1145989:-1:exon
so has part: feature:1145537-1145590:-1:exon
so has part: feature:1144945-1145007:-1:exon
so has part: feature:1143967-1144011:-1:exon
so has part: feature:1143027-1143104:-1:exon
so has part: feature:1140730-1140783:-1:exon
so has part: feature:1140048-1140092:-1:exon
so has part: feature:1139065-1139154:-1:exon
so has part: feature:1138246-1138308:-1:exon
so has part: feature:1137870-1137926:-1:exon
so has part: feature:1137621-1137647:-1:exon
so has part: feature:1136573-1136635:-1:exon
so has part: feature:1136438-1136491:-1:exon
so has part: feature:1136121-1136147:-1:exon
so has part: feature:1133668-1133721:-1:exon
so has part: feature:1133371-1133457:-1:exon
so has part: feature:1131835-1131873:-1:exon
so has part: feature:1127481-1131434:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1157538-1157547:-1:exon

position:1157538:-1
position: 1157538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1156569-1156621:-1:exon

position:1156569:-1
position: 1156569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156621:-1
position: 1156621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1156214-1156354:-1:exon

position:1156214:-1
position: 1156214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156354:-1
position: 1156354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1154569-1154595:-1:exon

position:1154569:-1
position: 1154569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154595:-1
position: 1154595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1150524-1150640:-1:exon

position:1150524:-1
position: 1150524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150640:-1
position: 1150640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1148955-1148994:-1:exon

position:1148955:-1
position: 1148955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148994:-1
position: 1148994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1148525-1148556:-1:exon

position:1148525:-1
position: 1148525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148556:-1
position: 1148556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1145969-1145989:-1:exon

position:1145969:-1
position: 1145969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145989:-1
position: 1145989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1145537-1145590:-1:exon

position:1145537:-1
position: 1145537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145590:-1
position: 1145590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1144945-1145007:-1:exon

position:1144945:-1
position: 1144945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145007:-1
position: 1145007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1143967-1144011:-1:exon

position:1143967:-1
position: 1143967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144011:-1
position: 1144011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1143027-1143104:-1:exon

position:1143027:-1
position: 1143027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143104:-1
position: 1143104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1140730-1140783:-1:exon

position:1140730:-1
position: 1140730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140783:-1
position: 1140783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1140048-1140092:-1:exon

position:1140048:-1
position: 1140048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140092:-1
position: 1140092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1139065-1139154:-1:exon

position:1139065:-1
position: 1139065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139154:-1
position: 1139154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1138246-1138308:-1:exon

position:1138246:-1
position: 1138246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138308:-1
position: 1138308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1137870-1137926:-1:exon

position:1137870:-1
position: 1137870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137926:-1
position: 1137926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1137621-1137647:-1:exon

position:1137621:-1
position: 1137621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137647:-1
position: 1137647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1136573-1136635:-1:exon

position:1136573:-1
position: 1136573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136635:-1
position: 1136635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1136438-1136491:-1:exon

position:1136438:-1
position: 1136438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136491:-1
position: 1136491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1136121-1136147:-1:exon

position:1136121:-1
position: 1136121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136147:-1
position: 1136147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1133668-1133721:-1:exon

position:1133668:-1
position: 1133668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133721:-1
position: 1133721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1133371-1133457:-1:exon

position:1133371:-1
position: 1133371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133457:-1
position: 1133457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1131835-1131873:-1:exon

position:1131835:-1
position: 1131835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131873:-1
position: 1131873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1127481-1131434:-1:exon

position:1131434:-1
position: 1131434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105883828
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105883828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXIII) chain-like
translation: MGSYSRRAAWGQWSPPRQQVQLPTALLSLTGPGSRGEAGRAASLGLLAQACCFSTFLLQGLPGPKGEKGVPGDFGPRGDQGQDGAAGPPGPPGPPGARGPPGDTGKDGPRGAPGQAGPRGEPGRDGETVRPQGPPGPEASPAVPGKKGVDGTPGWPGLPGPPGPKGEPGSAGPRGENGVDGAPGLKGEPGHRGLDGAAGPRGPPGLKGEQGDTVVIDYDGRILDAFKGPPGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPRGPKGDPGEPGPTGLKGEAGEMGLSGLPGADGPKGEKGDSASDSLQESLAQIIVEPGPPGPPGPPGPMGLQGVQGPKGSDGAKGEKGASGERGPGGLPGPIGPPGLIGLPGTKGEKGRPGEPGLDGFPGPRGEKGDRSERGEKGDRGVPGRKGVKGQKGEPGPPGLDQPCPVGPDGLPVPGCWHK
SIO_010081: LOC105883828
subclass of: SO_0000673
so part of: LOC105883828
location: complement(join(1131432..1131434,1131835..1131873,1133371..1133457,1133668..1133721,1136121..1136147,1136438..1136491,1136573..1136635,1137621..1137647,1137870..1137926,1138246..1138308,1139065..1139154,1140048..1140092,1140730..1140783,1143027..1143104,1143967..1144011,1144945..1145007,1145537..1145590,1145969..1145989,1148525..1148556,1148955..1148994,1150524..1150640,1154569..1154595,1156214..1156354,1156569..1156621,1157538..1157547))
location: region:1131432-1157547:-1
so has part: feature:1157538-1157547:-1:exon
so has part: feature:1156569-1156621:-1:exon
so has part: feature:1156214-1156354:-1:exon
so has part: feature:1154569-1154595:-1:exon
so has part: feature:1150524-1150640:-1:exon
so has part: feature:1148955-1148994:-1:exon
so has part: feature:1148525-1148556:-1:exon
so has part: feature:1145969-1145989:-1:exon
so has part: feature:1145537-1145590:-1:exon
so has part: feature:1144945-1145007:-1:exon
so has part: feature:1143967-1144011:-1:exon
so has part: feature:1143027-1143104:-1:exon
so has part: feature:1140730-1140783:-1:exon
so has part: feature:1140048-1140092:-1:exon
so has part: feature:1139065-1139154:-1:exon
so has part: feature:1138246-1138308:-1:exon
so has part: feature:1137870-1137926:-1:exon
so has part: feature:1137621-1137647:-1:exon
so has part: feature:1136573-1136635:-1:exon
so has part: feature:1136438-1136491:-1:exon
so has part: feature:1136121-1136147:-1:exon
so has part: feature:1133668-1133721:-1:exon
so has part: feature:1133371-1133457:-1:exon
so has part: feature:1131835-1131873:-1:exon
so has part: feature:1131432-1131434:-1:exon

XP_012642734.1
type: Protein
SIO_000068: ncbiprotein

position:1131432:-1
position: 1131432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1157538-1157547:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1156569-1156621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1156214-1156354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1154569-1154595:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1150524-1150640:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1148955-1148994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1148525-1148556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1145969-1145989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1145537-1145590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1144945-1145007:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1143967-1144011:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1143027-1143104:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1140730-1140783:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1140048-1140092:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1139065-1139154:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1138246-1138308:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1137870-1137926:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1137621-1137647:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1136573-1136635:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1136438-1136491:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1136121-1136147:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1133668-1133721:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1133371-1133457:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1131835-1131873:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1131432-1131434:-1:exon

LOC105883829
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105883829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1157271..1327702)
location: region:1157271-1327702:-1
so has part: feature:1157271-1327702:-1:exon
subclass of: SO_0000010

105883829
type: Gene
SIO_000068: ncbigene

position:1157271:-1
position: 1157271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327702:-1
position: 1327702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1157271-1327702:-1:exon

LOC105883829
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105883829
product: collagen alpha-1(XXIII) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284811.1
SIO_010081: LOC105883829
subclass of: SO_0000673
so part of: LOC105883829
location: complement(join(1157271..1157852,1176285..1176311,1177769..1177776,1184596..1184640,1324939..1325005,1325441..1325574,1327612..1327702))
location: region:1157271-1327702:-1
so has part: feature:1327612-1327702:-1:exon
so has part: feature:1325441-1325574:-1:exon
so has part: feature:1324939-1325005:-1:exon
so has part: feature:1184596-1184640:-1:exon
so has part: feature:1177769-1177776:-1:exon
so has part: feature:1176285-1176311:-1:exon
so has part: feature:1157271-1157852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1327612-1327702:-1:exon

position:1327612:-1
position: 1327612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1325441-1325574:-1:exon

position:1325441:-1
position: 1325441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325574:-1
position: 1325574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1324939-1325005:-1:exon

position:1324939:-1
position: 1324939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325005:-1
position: 1325005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1184596-1184640:-1:exon

position:1184596:-1
position: 1184596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184640:-1
position: 1184640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1177769-1177776:-1:exon

position:1177769:-1
position: 1177769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177776:-1
position: 1177776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1176285-1176311:-1:exon

position:1176285:-1
position: 1176285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176311:-1
position: 1176311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1157271-1157852:-1:exon

position:1157852:-1
position: 1157852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105883829
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105883829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXIII) chain-like
translation: MTVPAALPGGFSTNSIFSFLRVYFRGMHSRLATHFCLHFCSNSFPFTQIGHRAGHVPGFLLSCTEPNFLGQGSPLKLDGLAKLRTVREAPSECVCPPGPPGRRGKPGKRGDPGPPGQPGRDGYPGPLGLDGKPVSVDKAILGGAGMALPLWGCE
SIO_010081: LOC105883829
subclass of: SO_0000673
so part of: LOC105883829
location: complement(join(1157760..1157852,1176285..1176311,1177769..1177776,1184596..1184640,1324939..1325005,1325441..1325574,1327612..1327702))
location: region:1157760-1327702:-1
so has part: feature:1327612-1327702:-1:exon
so has part: feature:1325441-1325574:-1:exon
so has part: feature:1324939-1325005:-1:exon
so has part: feature:1184596-1184640:-1:exon
so has part: feature:1177769-1177776:-1:exon
so has part: feature:1176285-1176311:-1:exon
so has part: feature:1157760-1157852:-1:exon

XP_020140400.1
type: Protein
SIO_000068: ncbiprotein

position:1157760:-1
position: 1157760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327612-1327702:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1325441-1325574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1324939-1325005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1184596-1184640:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1177769-1177776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1176285-1176311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1157760-1157852:-1:exon

LOC105883821
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105883821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1178639..1182032)
location: region:1178639-1182032:-1
so has part: feature:1178639-1182032:-1:exon

105883821
type: Gene
SIO_000068: ncbigene

position:1178639:-1
position: 1178639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182032:-1
position: 1182032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178639-1182032:-1:exon

LOC105883821
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105883821
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105883821
subclass of: SO_0000673
so part of: LOC105883821
location: complement(1178639..1178840)
location: region:1178639-1178840:-1
so has part: feature:1178639-1178840:-1:exon

position:1178840:-1
position: 1178840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178639-1178840:-1:exon

LOC105883821
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105883821
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105883821
subclass of: SO_0000673
so part of: LOC105883821
location: complement(1178984..1179110)
location: region:1178984-1179110:-1
so has part: feature:1178984-1179110:-1:exon

position:1178984:-1
position: 1178984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179110:-1
position: 1179110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178984-1179110:-1:exon

LOC105883821
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105883821
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105883821
subclass of: SO_0000673
so part of: LOC105883821
location: complement(1180544..1180983)
location: region:1180544-1180983:-1
so has part: feature:1180544-1180983:-1:exon

position:1180544:-1
position: 1180544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180983:-1
position: 1180983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1180544-1180983:-1:exon

LOC105883821
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105883821
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105883821
subclass of: SO_0000673
so part of: LOC105883821
location: complement(1181291..1181494)
location: region:1181291-1181494:-1
so has part: feature:1181291-1181494:-1:exon

position:1181291:-1
position: 1181291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181494:-1
position: 1181494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1181291-1181494:-1:exon

LOC105883821
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105883821
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105883821
subclass of: SO_0000673
so part of: LOC105883821
location: complement(1182018..1182032)
location: region:1182018-1182032:-1
so has part: feature:1182018-1182032:-1:exon

position:1182018:-1
position: 1182018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1182018-1182032:-1:exon

LOC105883870
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105883870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1218025..1221399
location: region:1218025-1221399:1
so has part: feature:1218025-1221399:1:exon
subclass of: SO_0000011

105883870
type: Gene
SIO_000068: ncbigene

position:1218025:1
position: 1218025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221399:1
position: 1221399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1218025-1221399:1:exon

LOC105883870
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105883870
product: uncharacterized LOC105883870
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159954.1
SIO_010081: LOC105883870
subclass of: SO_0000673
so part of: LOC105883870
location: join(1218025..1220187,1220500..1220883,1220984..1221399)
location: region:1218025-1221399:1
so has part: feature:1218025-1220187:1:exon
so has part: feature:1220500-1220883:1:exon
so has part: feature:1220984-1221399:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1218025-1220187:1:exon

position:1220187:1
position: 1220187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1220500-1220883:1:exon

position:1220500:1
position: 1220500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220883:1
position: 1220883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1220984-1221399:1:exon

position:1220984:1
position: 1220984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CLK4
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: CLK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1357972..1381886)
location: region:1357972-1381886:-1
so has part: feature:1357972-1381886:-1:exon
subclass of: SO_0000010

105883871
type: Gene
SIO_000068: ncbigene

position:1357972:-1
position: 1357972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381886:-1
position: 1381886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1357972-1381886:-1:exon

CLK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CLK4
product: CDC like kinase 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012787387.2
SIO_010081: CLK4
subclass of: SO_0000673
so part of: CLK4
location: complement(join(1357972..1358771,1358857..1358947,1359704..1359783,1362653..1362735,1363948..1364077,1364334..1364428,1364634..1364800,1364887..1365003,1367357..1367423,1367821..1367911,1369029..1369254,1373712..1373872,1381778..1381886))
location: region:1357972-1381886:-1
so has part: feature:1381778-1381886:-1:exon
so has part: feature:1373712-1373872:-1:exon
so has part: feature:1369029-1369254:-1:exon
so has part: feature:1367821-1367911:-1:exon
so has part: feature:1367357-1367423:-1:exon
so has part: feature:1364887-1365003:-1:exon
so has part: feature:1364634-1364800:-1:exon
so has part: feature:1364334-1364428:-1:exon
so has part: feature:1363948-1364077:-1:exon
so has part: feature:1362653-1362735:-1:exon
so has part: feature:1359704-1359783:-1:exon
so has part: feature:1358857-1358947:-1:exon
so has part: feature:1357972-1358771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1381778-1381886:-1:exon

position:1381778:-1
position: 1381778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1373712-1373872:-1:exon

position:1373712:-1
position: 1373712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1373872:-1
position: 1373872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1369029-1369254:-1:exon

position:1369029:-1
position: 1369029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1369254:-1
position: 1369254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1367821-1367911:-1:exon

position:1367821:-1
position: 1367821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367911:-1
position: 1367911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1367357-1367423:-1:exon

position:1367357:-1
position: 1367357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367423:-1
position: 1367423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1364887-1365003:-1:exon

position:1364887:-1
position: 1364887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365003:-1
position: 1365003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1364634-1364800:-1:exon

position:1364634:-1
position: 1364634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364800:-1
position: 1364800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1364334-1364428:-1:exon

position:1364334:-1
position: 1364334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364428:-1
position: 1364428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1363948-1364077:-1:exon

position:1363948:-1
position: 1363948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364077:-1
position: 1364077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1362653-1362735:-1:exon

position:1362653:-1
position: 1362653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362735:-1
position: 1362735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1359704-1359783:-1:exon

position:1359704:-1
position: 1359704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359783:-1
position: 1359783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1358857-1358947:-1:exon

position:1358857:-1
position: 1358857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358947:-1
position: 1358947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1357972-1358771:-1:exon

position:1358771:-1
position: 1358771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CLK4
product: CDC like kinase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012787384.2
SIO_010081: CLK4
subclass of: SO_0000673
so part of: CLK4
location: complement(join(1357972..1358771,1358857..1358947,1359704..1359783,1362653..1362735,1363948..1364077,1364334..1364428,1364634..1364800,1364887..1365003,1367357..1367423,1367821..1367911,1369029..1369254,1372786..1372852,1373712..1373872,1381778..1381886))
location: region:1357972-1381886:-1
so has part: feature:1381778-1381886:-1:exon
so has part: feature:1373712-1373872:-1:exon
so has part: feature:1372786-1372852:-1:exon
so has part: feature:1369029-1369254:-1:exon
so has part: feature:1367821-1367911:-1:exon
so has part: feature:1367357-1367423:-1:exon
so has part: feature:1364887-1365003:-1:exon
so has part: feature:1364634-1364800:-1:exon
so has part: feature:1364334-1364428:-1:exon
so has part: feature:1363948-1364077:-1:exon
so has part: feature:1362653-1362735:-1:exon
so has part: feature:1359704-1359783:-1:exon
so has part: feature:1358857-1358947:-1:exon
so has part: feature:1357972-1358771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1381778-1381886:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1373712-1373872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1372786-1372852:-1:exon

position:1372786:-1
position: 1372786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1372852:-1
position: 1372852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1369029-1369254:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1367821-1367911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1367357-1367423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1364887-1365003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1364634-1364800:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1364334-1364428:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1363948-1364077:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1362653-1362735:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1359704-1359783:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1358857-1358947:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1357972-1358771:-1:exon

CLK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CLK4
product: CDC like kinase 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 59 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012787386.1
SIO_010081: CLK4
subclass of: SO_0000673
so part of: CLK4
location: complement(join(1357972..1358771,1358857..1358947,1359704..1359783,1362653..1362735,1363948..1364077,1364334..1364428,1364634..1364800,1364887..1365003,1367357..1367423,1367821..1367911,1369029..1369254,1373712..1373872,1378287..1378473))
location: region:1357972-1378473:-1
so has part: feature:1378287-1378473:-1:exon
so has part: feature:1373712-1373872:-1:exon
so has part: feature:1369029-1369254:-1:exon
so has part: feature:1367821-1367911:-1:exon
so has part: feature:1367357-1367423:-1:exon
so has part: feature:1364887-1365003:-1:exon
so has part: feature:1364634-1364800:-1:exon
so has part: feature:1364334-1364428:-1:exon
so has part: feature:1363948-1364077:-1:exon
so has part: feature:1362653-1362735:-1:exon
so has part: feature:1359704-1359783:-1:exon
so has part: feature:1358857-1358947:-1:exon
so has part: feature:1357972-1358771:-1:exon

position:1378473:-1
position: 1378473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378287-1378473:-1:exon

position:1378287:-1
position: 1378287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1373712-1373872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1369029-1369254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1367821-1367911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1367357-1367423:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1364887-1365003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1364634-1364800:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1364334-1364428:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1363948-1364077:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1362653-1362735:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1359704-1359783:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1358857-1358947:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1357972-1358771:-1:exon

CLK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CLK4
product: CDC like kinase 4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012787392.2
SIO_010081: CLK4
subclass of: SO_0000673
so part of: CLK4
location: complement(join(1357972..1358771,1358857..1358947,1359704..1359783,1362653..1362735,1363948..1364077,1364334..1364428,1364634..1364800,1364887..1365003,1367357..1367423,1367821..1367911,1369029..1369254,1370353..1370411,1370596..1371199,1372786..1372852,1373712..1373872,1378287..1378459))
location: region:1357972-1378459:-1
so has part: feature:1378287-1378459:-1:exon
so has part: feature:1373712-1373872:-1:exon
so has part: feature:1372786-1372852:-1:exon
so has part: feature:1370596-1371199:-1:exon
so has part: feature:1370353-1370411:-1:exon
so has part: feature:1369029-1369254:-1:exon
so has part: feature:1367821-1367911:-1:exon
so has part: feature:1367357-1367423:-1:exon
so has part: feature:1364887-1365003:-1:exon
so has part: feature:1364634-1364800:-1:exon
so has part: feature:1364334-1364428:-1:exon
so has part: feature:1363948-1364077:-1:exon
so has part: feature:1362653-1362735:-1:exon
so has part: feature:1359704-1359783:-1:exon
so has part: feature:1358857-1358947:-1:exon
so has part: feature:1357972-1358771:-1:exon

position:1378459:-1
position: 1378459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378287-1378459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1373712-1373872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1372786-1372852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370596-1371199:-1:exon

position:1370596:-1
position: 1370596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371199:-1
position: 1371199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1370353-1370411:-1:exon

position:1370353:-1
position: 1370353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370411:-1
position: 1370411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1369029-1369254:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1367821-1367911:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1367357-1367423:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1364887-1365003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1364634-1364800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1364334-1364428:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1363948-1364077:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1362653-1362735:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1359704-1359783:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1358857-1358947:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1357972-1358771:-1:exon

CLK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CLK4
product: CDC like kinase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012787383.1
SIO_010081: CLK4
subclass of: SO_0000673
so part of: CLK4
location: complement(join(1357972..1358771,1358857..1358947,1359704..1359783,1362653..1362735,1363948..1364077,1364334..1364428,1364634..1364800,1364887..1365003,1367357..1367423,1367821..1367911,1369029..1369254,1372786..1372852,1373712..1373872,1378287..1378452))
location: region:1357972-1378452:-1
so has part: feature:1378287-1378452:-1:exon
so has part: feature:1373712-1373872:-1:exon
so has part: feature:1372786-1372852:-1:exon
so has part: feature:1369029-1369254:-1:exon
so has part: feature:1367821-1367911:-1:exon
so has part: feature:1367357-1367423:-1:exon
so has part: feature:1364887-1365003:-1:exon
so has part: feature:1364634-1364800:-1:exon
so has part: feature:1364334-1364428:-1:exon
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CLK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CLK4
product: CDC like kinase 4, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 44 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012787393.2
SIO_010081: CLK4
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CLK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CLK4
product: CDC like kinase 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012787389.2
SIO_010081: CLK4
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CLK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CLK4
product: CDC like kinase 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012787390.1
SIO_010081: CLK4
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CLK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CLK4
product: CDC like kinase 4, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 30 ESTs, 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012787394.1
SIO_010081: CLK4
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CLK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CLK4
product: CDC like kinase 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012787385.2
SIO_010081: CLK4
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CLK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CLK4
product: CDC like kinase 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 28 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012787388.2
SIO_010081: CLK4
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CLK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CLK4
product: CDC like kinase 4, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_020284819.1
SIO_010081: CLK4
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