Microcebus murinus isolate mixed chromosome 31, Mmur_3.0, whole genome shotgun sequence.
type: Entry
definition: Microcebus murinus isolate mixed chromosome 31, Mmur_3.0, whole genome shotgun sequence.
sequence version: NC_033690.1
sequence date: 2017-02-27
sequence: sequence
division: CON
label: NC_033690.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA285159
dblink: SAMN06275470
keyword: WGS
keyword: RefSeq
source: Microcebus murinus (gray mouse lemur)
organism: Microcebus murinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM007691.1.\nAssembly name: Mmur_3.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2017/02/06. The original whole-genome shotgun project has the\naccession ABDC00000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Date :: MAY-2015\nAssembly Method :: AllPathsLG v. 41070; Atlas Link v. 1.0;\n Atlas GapFill v. 2.0; PBJelly2 v. 14.9.9;\n Lachesis v. shendurelab-LACHESIS-2151de9;\n BioNano IrysSolve v. 2.1\nPolishing Method :: Pilon v 1.18\nAssembly Name :: Mmur_3.0\nGenome Coverage :: 221.6x\nSequencing Technology :: Illumina; PacBio RS; PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Microcebus murinus Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 47401472
topology: linear
so has quality: SO_0000987
location: 1..47401472
location: region:1-47401472:1
RO_0002162: 30608

NC_033690
type: RefSeq
SIO_000068: refseq

PRJNA285159
type: BioProject
SIO_000068: bioproject

SAMN06275470
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47401472:1
position: 47401472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-47401472:1:source
so part of: sequence
organism: Microcebus murinus
mol type: genomic DNA
isolate: mixed
chromosome: 31
sex: pooled male and female
tissue type: liver; kidney
note: three separate animals were used in this assembly: #8(Reference animal), 1886F (Citronella), 7006M (Rosehip)

30608
type: Taxonomy
SIO_000068: taxonomy

LOC105872738
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105872738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(37800..812888)
location: region:37800-812888:-1
so has part: feature:37800-812888:-1:exon
subclass of: SO_0000010

105872738
type: Gene
SIO_000068: ncbigene

position:37800:-1
position: 37800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812888:-1
position: 812888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37800-812888:-1:exon

LOC105872738
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105872738
product: ephrin type-A receptor 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_020284720.1
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(37800..38824,109547..109732,156577..156702,160072..160142,164180..164288,191543..191705,254301..254425,408735..409070,451223..451378,639641..640304,751995..752059,812421..812888))
location: region:37800-812888:-1
so has part: feature:812421-812888:-1:exon
so has part: feature:751995-752059:-1:exon
so has part: feature:639641-640304:-1:exon
so has part: feature:451223-451378:-1:exon
so has part: feature:408735-409070:-1:exon
so has part: feature:254301-254425:-1:exon
so has part: feature:191543-191705:-1:exon
so has part: feature:164180-164288:-1:exon
so has part: feature:160072-160142:-1:exon
so has part: feature:156577-156702:-1:exon
so has part: feature:109547-109732:-1:exon
so has part: feature:37800-38824:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:812421-812888:-1:exon

position:812421:-1
position: 812421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:751995-752059:-1:exon

position:751995:-1
position: 751995
reference: sequence
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position:752059:-1
position: 752059
reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:639641-640304:-1:exon

position:639641:-1
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reference: sequence
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position:640304:-1
position: 640304
reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:451223-451378:-1:exon

position:451223:-1
position: 451223
reference: sequence
type: ReverseStrandPosition
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position:451378:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:408735-409070:-1:exon

position:408735:-1
position: 408735
reference: sequence
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position:409070:-1
position: 409070
reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:254301-254425:-1:exon

position:254301:-1
position: 254301
reference: sequence
type: ReverseStrandPosition
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position:254425:-1
position: 254425
reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:191543-191705:-1:exon

position:191543:-1
position: 191543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191705:-1
position: 191705
reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:164180-164288:-1:exon

position:164180:-1
position: 164180
reference: sequence
type: ReverseStrandPosition
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position:164288:-1
position: 164288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:160072-160142:-1:exon

position:160072:-1
position: 160072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160142:-1
position: 160142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:156577-156702:-1:exon

position:156577:-1
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reference: sequence
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position:156702:-1
position: 156702
reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:109547-109732:-1:exon

position:109547:-1
position: 109547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109732:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:37800-38824:-1:exon

position:38824:-1
position: 38824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105872738
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105872738
product: ephrin type-A receptor 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_020284718.1
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(37800..38824,109547..109732,156577..156702,160072..160142,164180..164288,191543..191705,206918..206965,254301..254425,408735..409070,451223..451378,639641..640304,751995..752059,812421..812888))
location: region:37800-812888:-1
so has part: feature:812421-812888:-1:exon
so has part: feature:751995-752059:-1:exon
so has part: feature:639641-640304:-1:exon
so has part: feature:451223-451378:-1:exon
so has part: feature:408735-409070:-1:exon
so has part: feature:254301-254425:-1:exon
so has part: feature:206918-206965:-1:exon
so has part: feature:191543-191705:-1:exon
so has part: feature:164180-164288:-1:exon
so has part: feature:160072-160142:-1:exon
so has part: feature:156577-156702:-1:exon
so has part: feature:109547-109732:-1:exon
so has part: feature:37800-38824:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:812421-812888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751995-752059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639641-640304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451223-451378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408735-409070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254301-254425:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206918-206965:-1:exon

position:206918:-1
position: 206918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206965:-1
position: 206965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:191543-191705:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:164180-164288:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160072-160142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:156577-156702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109547-109732:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:37800-38824:-1:exon

LOC105872738
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105872738
product: ephrin type-A receptor 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284719.1
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(38673..38824,82210..82306,109547..109732,156577..156702,160072..160142,164180..164288,191543..191705,254301..254425,408735..409070,451223..451378,639641..640304,751995..752059,812421..812888))
location: region:38673-812888:-1
so has part: feature:812421-812888:-1:exon
so has part: feature:751995-752059:-1:exon
so has part: feature:639641-640304:-1:exon
so has part: feature:451223-451378:-1:exon
so has part: feature:408735-409070:-1:exon
so has part: feature:254301-254425:-1:exon
so has part: feature:191543-191705:-1:exon
so has part: feature:164180-164288:-1:exon
so has part: feature:160072-160142:-1:exon
so has part: feature:156577-156702:-1:exon
so has part: feature:109547-109732:-1:exon
so has part: feature:82210-82306:-1:exon
so has part: feature:38673-38824:-1:exon

position:38673:-1
position: 38673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812421-812888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751995-752059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639641-640304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451223-451378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408735-409070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254301-254425:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191543-191705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:164180-164288:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160072-160142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156577-156702:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109547-109732:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82210-82306:-1:exon

position:82210:-1
position: 82210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82306:-1
position: 82306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:38673-38824:-1:exon

LOC105872738
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105872738
product: ephrin type-A receptor 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284717.1
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(38673..38824,82210..82306,109547..109732,156577..156702,160072..160142,164180..164288,191543..191705,206918..206965,254301..254425,408735..409070,451223..451378,639641..640304,751995..752059,812421..812888))
location: region:38673-812888:-1
so has part: feature:812421-812888:-1:exon
so has part: feature:751995-752059:-1:exon
so has part: feature:639641-640304:-1:exon
so has part: feature:451223-451378:-1:exon
so has part: feature:408735-409070:-1:exon
so has part: feature:254301-254425:-1:exon
so has part: feature:206918-206965:-1:exon
so has part: feature:191543-191705:-1:exon
so has part: feature:164180-164288:-1:exon
so has part: feature:160072-160142:-1:exon
so has part: feature:156577-156702:-1:exon
so has part: feature:109547-109732:-1:exon
so has part: feature:82210-82306:-1:exon
so has part: feature:38673-38824:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:812421-812888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751995-752059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639641-640304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451223-451378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408735-409070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254301-254425:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206918-206965:-1:exon

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SIO_000300: 8
SIO_000628: feature:191543-191705:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:164180-164288:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160072-160142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:156577-156702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109547-109732:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82210-82306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:38673-38824:-1:exon

LOC105872738
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105872738
product: ephrin type-A receptor 6, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284721.1
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(38673..38824,82210..82306,109547..109732,156577..156702,160072..160142,164180..164288,191543..191705,206918..206965,254301..254425,408735..409070,451223..451378,639641..640304,718333..718409,751995..752059,812421..812835))
location: region:38673-812835:-1
so has part: feature:812421-812835:-1:exon
so has part: feature:751995-752059:-1:exon
so has part: feature:718333-718409:-1:exon
so has part: feature:639641-640304:-1:exon
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so has part: feature:408735-409070:-1:exon
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so has part: feature:191543-191705:-1:exon
so has part: feature:164180-164288:-1:exon
so has part: feature:160072-160142:-1:exon
so has part: feature:156577-156702:-1:exon
so has part: feature:109547-109732:-1:exon
so has part: feature:82210-82306:-1:exon
so has part: feature:38673-38824:-1:exon

position:812835:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:812421-812835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751995-752059:-1:exon

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SIO_000300: 3
SIO_000628: feature:718333-718409:-1:exon

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reference: sequence
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position:718409:-1
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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:639641-640304:-1:exon

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SIO_000628: feature:451223-451378:-1:exon

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SIO_000300: 8
SIO_000628: feature:206918-206965:-1:exon

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SIO_000300: 9
SIO_000628: feature:191543-191705:-1:exon

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SIO_000300: 10
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SIO_000300: 11
SIO_000628: feature:160072-160142:-1:exon

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SIO_000300: 12
SIO_000628: feature:156577-156702:-1:exon

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SIO_000300: 13
SIO_000628: feature:109547-109732:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82210-82306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:38673-38824:-1:exon

LOC105872738
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105872738
product: ephrin type-A receptor 6, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284722.1
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(38673..38824,82210..82306,109547..109732,156577..156702,160072..160142,164180..164288,191543..191705,206918..206965,254301..254425,408735..409070,451223..451378,639641..640304,692512..692631,751995..752059,812421..812439))
location: region:38673-812439:-1
so has part: feature:812421-812439:-1:exon
so has part: feature:751995-752059:-1:exon
so has part: feature:692512-692631:-1:exon
so has part: feature:639641-640304:-1:exon
so has part: feature:451223-451378:-1:exon
so has part: feature:408735-409070:-1:exon
so has part: feature:254301-254425:-1:exon
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so has part: feature:164180-164288:-1:exon
so has part: feature:160072-160142:-1:exon
so has part: feature:156577-156702:-1:exon
so has part: feature:109547-109732:-1:exon
so has part: feature:82210-82306:-1:exon
so has part: feature:38673-38824:-1:exon

position:812439:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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position:692512:-1
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urn:…
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urn:…
SIO_000300: 7
SIO_000628: feature:254301-254425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:206918-206965:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191543-191705:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:164180-164288:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:160072-160142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:156577-156702:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:109547-109732:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:82210-82306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:38673-38824:-1:exon

LOC105872738
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105872738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 6 isoform X4
translation: MQFRSPPASRSSPAPKAASSPEAAALAPGQPGPSCPAPGTSRGGRPGTPPAGRVEEEEEEEEDVGKDLHSIQNTYLRCCHLSLRRRRREPGRAMGGCEVREFLLQFGFFLPLLTAWPGDCSHVSNNQVVLLDTTTVLGELGWKTYPLNGWDAITEMDEHNRPIHTYQVCNVMEPNQNNWLRTNWISRDAAQKIYVEMKFTLRDCNSIPWVLGTCKETFNLYYMESDESHGIKFKPSQYTKIDTIAADESFTQMDLGDRILKLNTEIREVGPIERKGFYLAFQDIGACIALVSVRVFYKKCPFTVRNLAMFPDTIPRVDSSSLVEVRGSCVKSAEERDTPKLYCGADGDWLVPLGRCICSTGYEEVEGSCHACRPGFYKAFAGNTKCSKCPPHSLTYMEATSVCQCEKGYFRAEKDPPSMACTRPPSAPRNVIFNINETALILEWSPPSDTGGRKDLTYSVICKKCGLDTSQCEDCGGGLRFIPRHTGLINSSVIVLDFVSHVNYTFEIEAMNGVSELSFSPKPFTAITVTTDQDAPSLIGMVRKDWASQNSIALSWQAPAFSNGAILDYEIKYYEKEHEQLTYSSTRSKAPSVIITGLKPATKYIFHIRVRTATGYSGYSQKFEFETGDETSDMAAEQGQILVIATAAVGGFTLLVILTLFFLITGRCQWYIKAKMKSEEKRRNQLQNGHLRFPGIKTYIDPDTYEDPSLAVHEFAKEIDPSRIRIERVIGAGEFGEVCSGRLKTPGKREIPVAIKTLKGGHMDRQRRDFLREASIMGQFDHPNIIRLEGVVTKRSFPAIGVEAFCPSFLRAGFLNSIQAPPHPVPGGGSLPPRIPAGRYFR
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(38679..38824,109547..109732,156577..156702,160072..160142,164180..164288,191543..191705,254301..254425,408735..409070,451223..451378,639641..640304,751995..752059,812421..812802))
location: region:38679-812802:-1
so has part: feature:812421-812802:-1:exon
so has part: feature:751995-752059:-1:exon
so has part: feature:639641-640304:-1:exon
so has part: feature:451223-451378:-1:exon
so has part: feature:408735-409070:-1:exon
so has part: feature:254301-254425:-1:exon
so has part: feature:191543-191705:-1:exon
so has part: feature:164180-164288:-1:exon
so has part: feature:160072-160142:-1:exon
so has part: feature:156577-156702:-1:exon
so has part: feature:109547-109732:-1:exon
so has part: feature:38679-38824:-1:exon

XP_020140309.1
type: Protein
SIO_000068: ncbiprotein

position:38679:-1
position: 38679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812802:-1
position: 812802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812421-812802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751995-752059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639641-640304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451223-451378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408735-409070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254301-254425:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191543-191705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:164180-164288:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160072-160142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156577-156702:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109547-109732:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:38679-38824:-1:exon

LOC105872738
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105872738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 6 isoform X2
translation: MQFRSPPASRSSPAPKAASSPEAAALAPGQPGPSCPAPGTSRGGRPGTPPAGRVEEEEEEEEDVGKDLHSIQNTYLRCCHLSLRRRRREPGRAMGGCEVREFLLQFGFFLPLLTAWPGDCSHVSNNQVVLLDTTTVLGELGWKTYPLNGWDAITEMDEHNRPIHTYQVCNVMEPNQNNWLRTNWISRDAAQKIYVEMKFTLRDCNSIPWVLGTCKETFNLYYMESDESHGIKFKPSQYTKIDTIAADESFTQMDLGDRILKLNTEIREVGPIERKGFYLAFQDIGACIALVSVRVFYKKCPFTVRNLAMFPDTIPRVDSSSLVEVRGSCVKSAEERDTPKLYCGADGDWLVPLGRCICSTGYEEVEGSCHACRPGFYKAFAGNTKCSKCPPHSLTYMEATSVCQCEKGYFRAEKDPPSMACTRPPSAPRNVIFNINETALILEWSPPSDTGGRKDLTYSVICKKCGLDTSQCEDCGGGLRFIPRHTGLINSSVIVLDFVSHVNYTFEIEAMNGVSELSFSPKPFTAITVTTDQDAPSLIGMVRKDWASQNSIALSWQAPAFSNGAILDYEIKYYEKVYPRIAPAFWHYLRVEEHEQLTYSSTRSKAPSVIITGLKPATKYIFHIRVRTATGYSGYSQKFEFETGDETSDMAAEQGQILVIATAAVGGFTLLVILTLFFLITGRCQWYIKAKMKSEEKRRNQLQNGHLRFPGIKTYIDPDTYEDPSLAVHEFAKEIDPSRIRIERVIGAGEFGEVCSGRLKTPGKREIPVAIKTLKGGHMDRQRRDFLREASIMGQFDHPNIIRLEGVVTKRSFPAIGVEAFCPSFLRAGFLNSIQAPPHPVPGGGSLPPRIPAGRYFR
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(38679..38824,109547..109732,156577..156702,160072..160142,164180..164288,191543..191705,206918..206965,254301..254425,408735..409070,451223..451378,639641..640304,751995..752059,812421..812802))
location: region:38679-812802:-1
so has part: feature:812421-812802:-1:exon
so has part: feature:751995-752059:-1:exon
so has part: feature:639641-640304:-1:exon
so has part: feature:451223-451378:-1:exon
so has part: feature:408735-409070:-1:exon
so has part: feature:254301-254425:-1:exon
so has part: feature:206918-206965:-1:exon
so has part: feature:191543-191705:-1:exon
so has part: feature:164180-164288:-1:exon
so has part: feature:160072-160142:-1:exon
so has part: feature:156577-156702:-1:exon
so has part: feature:109547-109732:-1:exon
so has part: feature:38679-38824:-1:exon

XP_020140307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:812421-812802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751995-752059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639641-640304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451223-451378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408735-409070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254301-254425:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206918-206965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191543-191705:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:164180-164288:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160072-160142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:156577-156702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109547-109732:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38679-38824:-1:exon

LOC105872738
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105872738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 6 isoform X3
translation: MQFRSPPASRSSPAPKAASSPEAAALAPGQPGPSCPAPGTSRGGRPGTPPAGRVEEEEEEEEDVGKDLHSIQNTYLRCCHLSLRRRRREPGRAMGGCEVREFLLQFGFFLPLLTAWPGDCSHVSNNQVVLLDTTTVLGELGWKTYPLNGWDAITEMDEHNRPIHTYQVCNVMEPNQNNWLRTNWISRDAAQKIYVEMKFTLRDCNSIPWVLGTCKETFNLYYMESDESHGIKFKPSQYTKIDTIAADESFTQMDLGDRILKLNTEIREVGPIERKGFYLAFQDIGACIALVSVRVFYKKCPFTVRNLAMFPDTIPRVDSSSLVEVRGSCVKSAEERDTPKLYCGADGDWLVPLGRCICSTGYEEVEGSCHACRPGFYKAFAGNTKCSKCPPHSLTYMEATSVCQCEKGYFRAEKDPPSMACTRPPSAPRNVIFNINETALILEWSPPSDTGGRKDLTYSVICKKCGLDTSQCEDCGGGLRFIPRHTGLINSSVIVLDFVSHVNYTFEIEAMNGVSELSFSPKPFTAITVTTDQDAPSLIGMVRKDWASQNSIALSWQAPAFSNGAILDYEIKYYEKEHEQLTYSSTRSKAPSVIITGLKPATKYIFHIRVRTATGYSGYSQKFEFETGDETSDMAAEQGQILVIATAAVGGFTLLVILTLFFLITGRCQWYIKAKMKSEEKRRNQLQNGHLRFPGIKTYIDPDTYEDPSLAVHEFAKEIDPSRIRIERVIGAGEFGEVCSGRLKTPGKREIPVAIKTLKGGHMDRQRRDFLREASIMGQFDHPNIIRLEGVVTKNEPSPLVAQLSLLCSAPPNCSLRIQVEKFPKHRILPGHWGGGVLSQLPEGGVFK
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(38758..38824,82210..82306,109547..109732,156577..156702,160072..160142,164180..164288,191543..191705,254301..254425,408735..409070,451223..451378,639641..640304,751995..752059,812421..812802))
location: region:38758-812802:-1
so has part: feature:812421-812802:-1:exon
so has part: feature:751995-752059:-1:exon
so has part: feature:639641-640304:-1:exon
so has part: feature:451223-451378:-1:exon
so has part: feature:408735-409070:-1:exon
so has part: feature:254301-254425:-1:exon
so has part: feature:191543-191705:-1:exon
so has part: feature:164180-164288:-1:exon
so has part: feature:160072-160142:-1:exon
so has part: feature:156577-156702:-1:exon
so has part: feature:109547-109732:-1:exon
so has part: feature:82210-82306:-1:exon
so has part: feature:38758-38824:-1:exon

XP_020140308.1
type: Protein
SIO_000068: ncbiprotein

position:38758:-1
position: 38758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812421-812802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751995-752059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639641-640304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451223-451378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408735-409070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254301-254425:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191543-191705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:164180-164288:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160072-160142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156577-156702:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109547-109732:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82210-82306:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38758-38824:-1:exon

LOC105872738
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105872738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 6 isoform X1
translation: MQFRSPPASRSSPAPKAASSPEAAALAPGQPGPSCPAPGTSRGGRPGTPPAGRVEEEEEEEEDVGKDLHSIQNTYLRCCHLSLRRRRREPGRAMGGCEVREFLLQFGFFLPLLTAWPGDCSHVSNNQVVLLDTTTVLGELGWKTYPLNGWDAITEMDEHNRPIHTYQVCNVMEPNQNNWLRTNWISRDAAQKIYVEMKFTLRDCNSIPWVLGTCKETFNLYYMESDESHGIKFKPSQYTKIDTIAADESFTQMDLGDRILKLNTEIREVGPIERKGFYLAFQDIGACIALVSVRVFYKKCPFTVRNLAMFPDTIPRVDSSSLVEVRGSCVKSAEERDTPKLYCGADGDWLVPLGRCICSTGYEEVEGSCHACRPGFYKAFAGNTKCSKCPPHSLTYMEATSVCQCEKGYFRAEKDPPSMACTRPPSAPRNVIFNINETALILEWSPPSDTGGRKDLTYSVICKKCGLDTSQCEDCGGGLRFIPRHTGLINSSVIVLDFVSHVNYTFEIEAMNGVSELSFSPKPFTAITVTTDQDAPSLIGMVRKDWASQNSIALSWQAPAFSNGAILDYEIKYYEKVYPRIAPAFWHYLRVEEHEQLTYSSTRSKAPSVIITGLKPATKYIFHIRVRTATGYSGYSQKFEFETGDETSDMAAEQGQILVIATAAVGGFTLLVILTLFFLITGRCQWYIKAKMKSEEKRRNQLQNGHLRFPGIKTYIDPDTYEDPSLAVHEFAKEIDPSRIRIERVIGAGEFGEVCSGRLKTPGKREIPVAIKTLKGGHMDRQRRDFLREASIMGQFDHPNIIRLEGVVTKNEPSPLVAQLSLLCSAPPNCSLRIQVEKFPKHRILPGHWGGGVLSQLPEGGVFK
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(38758..38824,82210..82306,109547..109732,156577..156702,160072..160142,164180..164288,191543..191705,206918..206965,254301..254425,408735..409070,451223..451378,639641..640304,751995..752059,812421..812802))
location: region:38758-812802:-1
so has part: feature:812421-812802:-1:exon
so has part: feature:751995-752059:-1:exon
so has part: feature:639641-640304:-1:exon
so has part: feature:451223-451378:-1:exon
so has part: feature:408735-409070:-1:exon
so has part: feature:254301-254425:-1:exon
so has part: feature:206918-206965:-1:exon
so has part: feature:191543-191705:-1:exon
so has part: feature:164180-164288:-1:exon
so has part: feature:160072-160142:-1:exon
so has part: feature:156577-156702:-1:exon
so has part: feature:109547-109732:-1:exon
so has part: feature:82210-82306:-1:exon
so has part: feature:38758-38824:-1:exon

XP_020140306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:812421-812802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751995-752059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639641-640304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451223-451378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408735-409070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254301-254425:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206918-206965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191543-191705:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:164180-164288:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160072-160142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:156577-156702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109547-109732:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82210-82306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:38758-38824:-1:exon

LOC105872738
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105872738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 6 isoform X5
translation: MEDVSIKWDPAVSDFYSVLRPTLYVKWVKCQTSLWDAITEMDEHNRPIHTYQVCNVMEPNQNNWLRTNWISRDAAQKIYVEMKFTLRDCNSIPWVLGTCKETFNLYYMESDESHGIKFKPSQYTKIDTIAADESFTQMDLGDRILKLNTEIREVGPIERKGFYLAFQDIGACIALVSVRVFYKKCPFTVRNLAMFPDTIPRVDSSSLVEVRGSCVKSAEERDTPKLYCGADGDWLVPLGRCICSTGYEEVEGSCHACRPGFYKAFAGNTKCSKCPPHSLTYMEATSVCQCEKGYFRAEKDPPSMACTRPPSAPRNVIFNINETALILEWSPPSDTGGRKDLTYSVICKKCGLDTSQCEDCGGGLRFIPRHTGLINSSVIVLDFVSHVNYTFEIEAMNGVSELSFSPKPFTAITVTTDQDAPSLIGMVRKDWASQNSIALSWQAPAFSNGAILDYEIKYYEKVYPRIAPAFWHYLRVEEHEQLTYSSTRSKAPSVIITGLKPATKYIFHIRVRTATGYSGYSQKFEFETGDETSDMAAEQGQILVIATAAVGGFTLLVILTLFFLITGRCQWYIKAKMKSEEKRRNQLQNGHLRFPGIKTYIDPDTYEDPSLAVHEFAKEIDPSRIRIERVIGAGEFGEVCSGRLKTPGKREIPVAIKTLKGGHMDRQRRDFLREASIMGQFDHPNIIRLEGVVTKNEPSPLVAQLSLLCSAPPNCSLRIQVEKFPKHRILPGHWGGGVLSQLPEGGVFK
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(38758..38824,82210..82306,109547..109732,156577..156702,160072..160142,164180..164288,191543..191705,206918..206965,254301..254425,408735..409070,451223..451378,639641..640304,718333..718409,751995..752019))
location: region:38758-752019:-1
so has part: feature:751995-752019:-1:exon
so has part: feature:718333-718409:-1:exon
so has part: feature:639641-640304:-1:exon
so has part: feature:451223-451378:-1:exon
so has part: feature:408735-409070:-1:exon
so has part: feature:254301-254425:-1:exon
so has part: feature:206918-206965:-1:exon
so has part: feature:191543-191705:-1:exon
so has part: feature:164180-164288:-1:exon
so has part: feature:160072-160142:-1:exon
so has part: feature:156577-156702:-1:exon
so has part: feature:109547-109732:-1:exon
so has part: feature:82210-82306:-1:exon
so has part: feature:38758-38824:-1:exon

XP_020140310.1
type: Protein
SIO_000068: ncbiprotein

position:752019:-1
position: 752019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751995-752019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:718333-718409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639641-640304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451223-451378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408735-409070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254301-254425:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206918-206965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191543-191705:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:164180-164288:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160072-160142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:156577-156702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109547-109732:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:82210-82306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:38758-38824:-1:exon

LOC105872738
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105872738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 6 isoform X6
translation: MLLLLWMYMLQLHRSQWDAITEMDEHNRPIHTYQVCNVMEPNQNNWLRTNWISRDAAQKIYVEMKFTLRDCNSIPWVLGTCKETFNLYYMESDESHGIKFKPSQYTKIDTIAADESFTQMDLGDRILKLNTEIREVGPIERKGFYLAFQDIGACIALVSVRVFYKKCPFTVRNLAMFPDTIPRVDSSSLVEVRGSCVKSAEERDTPKLYCGADGDWLVPLGRCICSTGYEEVEGSCHACRPGFYKAFAGNTKCSKCPPHSLTYMEATSVCQCEKGYFRAEKDPPSMACTRPPSAPRNVIFNINETALILEWSPPSDTGGRKDLTYSVICKKCGLDTSQCEDCGGGLRFIPRHTGLINSSVIVLDFVSHVNYTFEIEAMNGVSELSFSPKPFTAITVTTDQDAPSLIGMVRKDWASQNSIALSWQAPAFSNGAILDYEIKYYEKVYPRIAPAFWHYLRVEEHEQLTYSSTRSKAPSVIITGLKPATKYIFHIRVRTATGYSGYSQKFEFETGDETSDMAAEQGQILVIATAAVGGFTLLVILTLFFLITGRCQWYIKAKMKSEEKRRNQLQNGHLRFPGIKTYIDPDTYEDPSLAVHEFAKEIDPSRIRIERVIGAGEFGEVCSGRLKTPGKREIPVAIKTLKGGHMDRQRRDFLREASIMGQFDHPNIIRLEGVVTKNEPSPLVAQLSLLCSAPPNCSLRIQVEKFPKHRILPGHWGGGVLSQLPEGGVFK
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(38758..38824,82210..82306,109547..109732,156577..156702,160072..160142,164180..164288,191543..191705,206918..206965,254301..254425,408735..409070,451223..451378,639641..640304,692512..692559))
location: region:38758-692559:-1
so has part: feature:692512-692559:-1:exon
so has part: feature:639641-640304:-1:exon
so has part: feature:451223-451378:-1:exon
so has part: feature:408735-409070:-1:exon
so has part: feature:254301-254425:-1:exon
so has part: feature:206918-206965:-1:exon
so has part: feature:191543-191705:-1:exon
so has part: feature:164180-164288:-1:exon
so has part: feature:160072-160142:-1:exon
so has part: feature:156577-156702:-1:exon
so has part: feature:109547-109732:-1:exon
so has part: feature:82210-82306:-1:exon
so has part: feature:38758-38824:-1:exon

XP_020140311.1
type: Protein
SIO_000068: ncbiprotein

position:692559:-1
position: 692559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692512-692559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639641-640304:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451223-451378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:408735-409070:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:254301-254425:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206918-206965:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191543-191705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:164180-164288:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160072-160142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156577-156702:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109547-109732:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82210-82306:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38758-38824:-1:exon

LOC105872738
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105872738
product: ephrin type-A receptor 6, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012767002.2
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(191633..191705,408735..409070,451223..451378,639641..640304,751995..752059,812421..812888))
location: region:191633-812888:-1
so has part: feature:812421-812888:-1:exon
so has part: feature:751995-752059:-1:exon
so has part: feature:639641-640304:-1:exon
so has part: feature:451223-451378:-1:exon
so has part: feature:408735-409070:-1:exon
so has part: feature:191633-191705:-1:exon

position:191633:-1
position: 191633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812421-812888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751995-752059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639641-640304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451223-451378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408735-409070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191633-191705:-1:exon

LOC105872738
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105872738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 6 isoform X7
translation: MQFRSPPASRSSPAPKAASSPEAAALAPGQPGPSCPAPGTSRGGRPGTPPAGRVEEEEEEEEDVGKDLHSIQNTYLRCCHLSLRRRRREPGRAMGGCEVREFLLQFGFFLPLLTAWPGDCSHVSNNQVVLLDTTTVLGELGWKTYPLNGWDAITEMDEHNRPIHTYQVCNVMEPNQNNWLRTNWISRDAAQKIYVEMKFTLRDCNSIPWVLGTCKETFNLYYMESDESHGIKFKPSQYTKIDTIAADESFTQMDLGDRILKLNTEIREVGPIERKGFYLAFQDIGACIALVSVRVFYKKCPFTVRNLAMFPDTIPRVDSSSLVEVRGSCVKSAEERDTPKLYCGADGDWLVPLGRCICSTGYEEVEGSCHACRPGFYKAFAGNTKCSKCPPHSLTYMEATSVCQCEKGYFRAEKDPPSMACTRPPSAPRNVIFNINETALILEWSPPSDTGGRKDLTYSVICKKCGLDTSQCEDCGGGLRFIPRHTGLINSSVIVLDFVSHVNYTFEIEAMNGVSELSFSPKPFTAITVTTDQDGA
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(191698..191705,408735..409070,451223..451378,639641..640304,751995..752059,812421..812802))
location: region:191698-812802:-1
so has part: feature:812421-812802:-1:exon
so has part: feature:751995-752059:-1:exon
so has part: feature:639641-640304:-1:exon
so has part: feature:451223-451378:-1:exon
so has part: feature:408735-409070:-1:exon
so has part: feature:191698-191705:-1:exon

XP_012622456.1
type: Protein
SIO_000068: ncbiprotein

position:191698:-1
position: 191698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812421-812802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751995-752059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639641-640304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451223-451378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408735-409070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191698-191705:-1:exon

LOC105872738
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105872738
product: ephrin type-A receptor 6, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284723.1
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(582135..587955,639641..640304,751995..752059,812421..812888))
location: region:582135-812888:-1
so has part: feature:812421-812888:-1:exon
so has part: feature:751995-752059:-1:exon
so has part: feature:639641-640304:-1:exon
so has part: feature:582135-587955:-1:exon

position:582135:-1
position: 582135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812421-812888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751995-752059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639641-640304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582135-587955:-1:exon

position:587955:-1
position: 587955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105872738
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105872738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 6 isoform X8
translation: MQFRSPPASRSSPAPKAASSPEAAALAPGQPGPSCPAPGTSRGGRPGTPPAGRVEEEEEEEEDVGKDLHSIQNTYLRCCHLSLRRRRREPGRAMGGCEVREFLLQFGFFLPLLTAWPGDCSHVSNNQVVLLDTTTVLGELGWKTYPLNGWDAITEMDEHNRPIHTYQVCNVMEPNQNNWLRTNWISRDAAQKIYVEMKFTLRDCNSIPWVLGTCKETFNLYYMESDESHGIKFKPSQYTKIDTIAADESFTQMDLGDRILKLNTEIREVGPIERKGFYLAFQDIGACIALVSVRVFYKKCPFTVRNLAMFPDTIPRVDSSSLVEVRGSCVKSAEERDTPKLYCGADGDWLVPLGRCICSTGYEEVEGSCHGMKELPVPIS
SIO_010081: LOC105872738
subclass of: SO_0000673
so part of: LOC105872738
location: complement(join(587924..587955,639641..640304,751995..752059,812421..812802))
location: region:587924-812802:-1
so has part: feature:812421-812802:-1:exon
so has part: feature:751995-752059:-1:exon
so has part: feature:639641-640304:-1:exon
so has part: feature:587924-587955:-1:exon

XP_020140312.1
type: Protein
SIO_000068: ncbiprotein

position:587924:-1
position: 587924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812421-812802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751995-752059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639641-640304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:587924-587955:-1:exon

LOC105872739
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105872739
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1957529..1959260
location: region:1957529-1959260:1
so has part: feature:1957529-1959260:1:exon

105872739
type: Gene
SIO_000068: ncbigene

position:1957529:1
position: 1957529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1959260:1
position: 1959260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1957529-1959260:1:exon

LOC105872739
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: LOC105872739
product: elongation factor 1-alpha 1 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2207 ESTs, 51 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_001154716.2
SIO_010081: LOC105872739
so part of: LOC105872739
location: 1957529..1959260
location: region:1957529-1959260:1
so has part: feature:1957529-1959260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1957529-1959260:1:exon

LOC105869312
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869312
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2939262..2959179)
location: region:2939262-2959179:-1
so has part: feature:2939262-2959179:-1:exon
subclass of: SO_0000011

105869312
type: Gene
SIO_000068: ncbigene

position:2939262:-1
position: 2939262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2959179:-1
position: 2959179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2939262-2959179:-1:exon

LOC105869312
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869312
product: uncharacterized LOC105869312
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001153108.1
SIO_010081: LOC105869312
subclass of: SO_0000673
so part of: LOC105869312
location: complement(join(2939262..2939346,2939904..2940077,2958855..2959179))
location: region:2939262-2959179:-1
so has part: feature:2958855-2959179:-1:exon
so has part: feature:2939904-2940077:-1:exon
so has part: feature:2939262-2939346:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2958855-2959179:-1:exon

position:2958855:-1
position: 2958855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2939904-2940077:-1:exon

position:2939904:-1
position: 2939904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2940077:-1
position: 2940077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2939262-2939346:-1:exon

position:2939346:-1
position: 2939346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105869311
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869311
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2966567..2989226)
location: region:2966567-2989226:-1
so has part: feature:2966567-2989226:-1:exon
subclass of: SO_0000011

105869311
type: Gene
SIO_000068: ncbigene

position:2966567:-1
position: 2966567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2989226:-1
position: 2989226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2966567-2989226:-1:exon

LOC105869311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869311
product: uncharacterized LOC105869311, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001153106.1
SIO_010081: LOC105869311
subclass of: SO_0000673
so part of: LOC105869311
location: complement(join(2966567..2966794,2967733..2967942,2987755..2987961,2988911..2989226))
location: region:2966567-2989226:-1
so has part: feature:2988911-2989226:-1:exon
so has part: feature:2987755-2987961:-1:exon
so has part: feature:2967733-2967942:-1:exon
so has part: feature:2966567-2966794:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2988911-2989226:-1:exon

position:2988911:-1
position: 2988911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2987755-2987961:-1:exon

position:2987755:-1
position: 2987755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2987961:-1
position: 2987961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2967733-2967942:-1:exon

position:2967733:-1
position: 2967733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2967942:-1
position: 2967942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2966567-2966794:-1:exon

position:2966794:-1
position: 2966794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105869311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869311
product: uncharacterized LOC105869311, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001153107.1
SIO_010081: LOC105869311
subclass of: SO_0000673
so part of: LOC105869311
location: complement(join(2966567..2966794,2967733..2967942,2987755..2987961,2988548..2988747))
location: region:2966567-2988747:-1
so has part: feature:2988548-2988747:-1:exon
so has part: feature:2987755-2987961:-1:exon
so has part: feature:2967733-2967942:-1:exon
so has part: feature:2966567-2966794:-1:exon

position:2988747:-1
position: 2988747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2988548-2988747:-1:exon

position:2988548:-1
position: 2988548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2987755-2987961:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2967733-2967942:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2966567-2966794:-1:exon

NSUN3
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: NSUN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3075535..3180274)
location: region:3075535-3180274:-1
so has part: feature:3075535-3180274:-1:exon
subclass of: SO_0000010

105869298
type: Gene
SIO_000068: ncbigene

position:3075535:-1
position: 3075535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3180274:-1
position: 3180274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3075535-3180274:-1:exon

NSUN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NSUN3
product: NOP2/Sun RNA methyltransferase family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012760987.2
SIO_010081: NSUN3
subclass of: SO_0000673
so part of: NSUN3
location: complement(join(3075535..3075901,3154776..3154897,3155666..3155820,3168134..3168477,3178908..3179017,3179834..3180274))
location: region:3075535-3180274:-1
so has part: feature:3179834-3180274:-1:exon
so has part: feature:3178908-3179017:-1:exon
so has part: feature:3168134-3168477:-1:exon
so has part: feature:3155666-3155820:-1:exon
so has part: feature:3154776-3154897:-1:exon
so has part: feature:3075535-3075901:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3179834-3180274:-1:exon

position:3179834:-1
position: 3179834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3178908-3179017:-1:exon

position:3178908:-1
position: 3178908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3179017:-1
position: 3179017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3168134-3168477:-1:exon

position:3168134:-1
position: 3168134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3168477:-1
position: 3168477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3155666-3155820:-1:exon

position:3155666:-1
position: 3155666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3155820:-1
position: 3155820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3154776-3154897:-1:exon

position:3154776:-1
position: 3154776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3154897:-1
position: 3154897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3075535-3075901:-1:exon

position:3075901:-1
position: 3075901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NSUN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NSUN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X2
translation: MILTRLKGKSDGKLTKQICKVVLDHFDKQYSKELGDAWNTVRDVLTSPSWWQYAVLFNRFNYPFKLEKDLHLKGYHTLFPGSIPYYPKSMKCYLSRTPDRLPSERHQIGNLKTYYLLNAASLLPVLALELRDGEKVLDLCAAPGGKSIALLQCACPGYLHCNEYDSLRLRWLRQTLESFIPQPLINAIKVSELDGREMGDVQPETFDKVLVDAPCSNDRSWLFSSDSQKAACRISQRRNLPVLQVELLRYSSWRLGYINEHNNFPALIRIAVQQEGQM
SIO_010081: NSUN3
subclass of: SO_0000673
so part of: NSUN3
location: complement(join(3075811..3075901,3154776..3154897,3155666..3155820,3168134..3168477,3178908..3179017,3179834..3179848))
location: region:3075811-3179848:-1
so has part: feature:3179834-3179848:-1:exon
so has part: feature:3178908-3179017:-1:exon
so has part: feature:3168134-3168477:-1:exon
so has part: feature:3155666-3155820:-1:exon
so has part: feature:3154776-3154897:-1:exon
so has part: feature:3075811-3075901:-1:exon

XP_012616441.1
type: Protein
SIO_000068: ncbiprotein

position:3075811:-1
position: 3075811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3179848:-1
position: 3179848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3179834-3179848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3178908-3179017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3168134-3168477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3155666-3155820:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3154776-3154897:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3075811-3075901:-1:exon

NSUN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NSUN3
product: NOP2/Sun RNA methyltransferase family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012760985.2
SIO_010081: NSUN3
subclass of: SO_0000673
so part of: NSUN3
location: complement(join(3105150..3107212,3154776..3154897,3155666..3155820,3168134..3168477,3178908..3179017,3179834..3180057))
location: region:3105150-3180057:-1
so has part: feature:3179834-3180057:-1:exon
so has part: feature:3178908-3179017:-1:exon
so has part: feature:3168134-3168477:-1:exon
so has part: feature:3155666-3155820:-1:exon
so has part: feature:3154776-3154897:-1:exon
so has part: feature:3105150-3107212:-1:exon

position:3105150:-1
position: 3105150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3180057:-1
position: 3180057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3179834-3180057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3178908-3179017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3168134-3168477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3155666-3155820:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3154776-3154897:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3105150-3107212:-1:exon

position:3107212:-1
position: 3107212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NSUN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NSUN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X1
translation: MILTRLKGKSDGKLTKQICKVVLDHFDKQYSKELGDAWNTVRDVLTSPSWWQYAVLFNRFNYPFKLEKDLHLKGYHTLFPGSIPYYPKSMKCYLSRTPDRLPSERHQIGNLKTYYLLNAASLLPVLALELRDGEKVLDLCAAPGGKSIALLQCACPGYLHCNEYDSLRLRWLRQTLESFIPQPLINAIKVSELDGREMGDVQPETFDKVLVDAPCSNDRSWLFSSDSQKAACRISQRRNLPVLQVELLRSAIKALRPGGLLVYSTCTLSKAENQDVISEILNSHNNIMPVDIKGIARTWSQDFTFAPIAQECGLLVIPDKGKAWGPMYVAKLKKS
SIO_010081: NSUN3
subclass of: SO_0000673
so part of: NSUN3
location: complement(join(3106951..3107212,3154776..3154897,3155666..3155820,3168134..3168477,3178908..3179017,3179834..3179848))
location: region:3106951-3179848:-1
so has part: feature:3179834-3179848:-1:exon
so has part: feature:3178908-3179017:-1:exon
so has part: feature:3168134-3168477:-1:exon
so has part: feature:3155666-3155820:-1:exon
so has part: feature:3154776-3154897:-1:exon
so has part: feature:3106951-3107212:-1:exon

XP_012616439.1
type: Protein
SIO_000068: ncbiprotein

position:3106951:-1
position: 3106951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3179834-3179848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3178908-3179017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3168134-3168477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3155666-3155820:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3154776-3154897:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3106951-3107212:-1:exon

NSUN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NSUN3
product: NOP2/Sun RNA methyltransferase family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012760988.2
SIO_010081: NSUN3
subclass of: SO_0000673
so part of: NSUN3
location: complement(join(3132362..3132700,3154776..3154897,3155666..3155820,3168134..3168477,3178908..3179017,3179834..3180274))
location: region:3132362-3180274:-1
so has part: feature:3179834-3180274:-1:exon
so has part: feature:3178908-3179017:-1:exon
so has part: feature:3168134-3168477:-1:exon
so has part: feature:3155666-3155820:-1:exon
so has part: feature:3154776-3154897:-1:exon
so has part: feature:3132362-3132700:-1:exon

position:3132362:-1
position: 3132362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3179834-3180274:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3178908-3179017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3168134-3168477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3155666-3155820:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3154776-3154897:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3132362-3132700:-1:exon

position:3132700:-1
position: 3132700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NSUN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NSUN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X3
translation: MILTRLKGKSDGKLTKQICKVVLDHFDKQYSKELGDAWNTVRDVLTSPSWWQYAVLFNRFNYPFKLEKDLHLKGYHTLFPGSIPYYPKSMKCYLSRTPDRLPSERHQIGNLKTYYLLNAASLLPVLALELRDGEKVLDLCAAPGGKSIALLQCACPGYLHCNEYDSLRLRWLRQTLESFIPQPLINAIKVSELDGREMGDVQPETFDKVLVDAPCSNDRSWLFSSDSQKAACRISQRRNLPVLQVELLSMKTLLEGIVLKGERSQKHMSSLYT
SIO_010081: NSUN3
subclass of: SO_0000673
so part of: NSUN3
location: complement(join(3132625..3132700,3154776..3154897,3155666..3155820,3168134..3168477,3178908..3179017,3179834..3179848))
location: region:3132625-3179848:-1
so has part: feature:3179834-3179848:-1:exon
so has part: feature:3178908-3179017:-1:exon
so has part: feature:3168134-3168477:-1:exon
so has part: feature:3155666-3155820:-1:exon
so has part: feature:3154776-3154897:-1:exon
so has part: feature:3132625-3132700:-1:exon

XP_012616442.1
type: Protein
SIO_000068: ncbiprotein

position:3132625:-1
position: 3132625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3179834-3179848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3178908-3179017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3168134-3168477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3155666-3155820:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3154776-3154897:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3132625-3132700:-1:exon

ARL13B
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: ARL13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3184699..3256330)
location: region:3184699-3256330:-1
so has part: feature:3184699-3256330:-1:exon
subclass of: SO_0000010

105869292
type: Gene
SIO_000068: ncbigene

position:3184699:-1
position: 3184699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3256330:-1
position: 3256330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3184699-3256330:-1:exon

ARL13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARL13B
product: ADP ribosylation factor like GTPase 13B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012760970.2
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(3184699..3186677,3191987..3192055,3193042..3193158,3196125..3196338,3201939..3202044,3204066..3204268,3205318..3205423,3224720..3224969,3231061..3231131,3255862..3256330))
location: region:3184699-3256330:-1
so has part: feature:3255862-3256330:-1:exon
so has part: feature:3231061-3231131:-1:exon
so has part: feature:3224720-3224969:-1:exon
so has part: feature:3205318-3205423:-1:exon
so has part: feature:3204066-3204268:-1:exon
so has part: feature:3201939-3202044:-1:exon
so has part: feature:3196125-3196338:-1:exon
so has part: feature:3193042-3193158:-1:exon
so has part: feature:3191987-3192055:-1:exon
so has part: feature:3184699-3186677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3255862-3256330:-1:exon

position:3255862:-1
position: 3255862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3231061-3231131:-1:exon

position:3231061:-1
position: 3231061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3231131:-1
position: 3231131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3224720-3224969:-1:exon

position:3224720:-1
position: 3224720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3224969:-1
position: 3224969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3205318-3205423:-1:exon

position:3205318:-1
position: 3205318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3205423:-1
position: 3205423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3204066-3204268:-1:exon

position:3204066:-1
position: 3204066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3204268:-1
position: 3204268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3201939-3202044:-1:exon

position:3201939:-1
position: 3201939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3202044:-1
position: 3202044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3196125-3196338:-1:exon

position:3196125:-1
position: 3196125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3196338:-1
position: 3196338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3193042-3193158:-1:exon

position:3193042:-1
position: 3193042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3193158:-1
position: 3193158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3191987-3192055:-1:exon

position:3191987:-1
position: 3191987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3192055:-1
position: 3192055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3184699-3186677:-1:exon

position:3186677:-1
position: 3186677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARL13B
product: ADP ribosylation factor like GTPase 13B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012760971.2
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(3184699..3186677,3193042..3193158,3196125..3196338,3201939..3202044,3204066..3204268,3205318..3205423,3224720..3224969,3231061..3231131,3255862..3256318))
location: region:3184699-3256318:-1
so has part: feature:3255862-3256318:-1:exon
so has part: feature:3231061-3231131:-1:exon
so has part: feature:3224720-3224969:-1:exon
so has part: feature:3205318-3205423:-1:exon
so has part: feature:3204066-3204268:-1:exon
so has part: feature:3201939-3202044:-1:exon
so has part: feature:3196125-3196338:-1:exon
so has part: feature:3193042-3193158:-1:exon
so has part: feature:3184699-3186677:-1:exon

position:3256318:-1
position: 3256318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3255862-3256318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3231061-3231131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3224720-3224969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3205318-3205423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3204066-3204268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3201939-3202044:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3196125-3196338:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3193042-3193158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3184699-3186677:-1:exon

ARL13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARL13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13B isoform X2
translation: MFSLMANCCSWFKRWREPVRKVTLVMVGLDNAGKTATAKGIQGEHPEDVAPTVGFSKIDLRQGKFEVTIFDLGGGKRIRGIWKNYYAESYGVIFVVDSSDEERMEETKETMSEVLRHPRISGKPVLVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAVLGYGKKIDKSIKKGLYWLLHIIARDFEALNERIQKDTTEQRALEEQEKRERAERVRKLQEERKQREEQAELDGTSDMAELDPEPMNPFQPIASVIIENEKKMEKEKKKQKMEKVSDGCHLKHKMEHEQIEPESKISDNGQKSNESGLVENYKKQLENEDETDQRSSESDNGKKKTKKLRMKRSHRVEPVNTDDSAPKSPTPPPPPPPNFYGKPLPPLAVRQRPNGDVHDVIS
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(3186601..3186677,3193042..3193158,3196125..3196338,3201939..3202044,3204066..3204268,3205318..3205423,3224720..3224969,3231061..3231131,3255862..3255920))
location: region:3186601-3255920:-1
so has part: feature:3255862-3255920:-1:exon
so has part: feature:3231061-3231131:-1:exon
so has part: feature:3224720-3224969:-1:exon
so has part: feature:3205318-3205423:-1:exon
so has part: feature:3204066-3204268:-1:exon
so has part: feature:3201939-3202044:-1:exon
so has part: feature:3196125-3196338:-1:exon
so has part: feature:3193042-3193158:-1:exon
so has part: feature:3186601-3186677:-1:exon

XP_012616425.1
type: Protein
SIO_000068: ncbiprotein

position:3186601:-1
position: 3186601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3255920:-1
position: 3255920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3255862-3255920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3231061-3231131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3224720-3224969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3205318-3205423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3204066-3204268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3201939-3202044:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3196125-3196338:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3193042-3193158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3186601-3186677:-1:exon

ARL13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARL13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13B isoform X1
translation: MFSLMANCCSWFKRWREPVRKVTLVMVGLDNAGKTATAKGIQGEHPEDVAPTVGFSKIDLRQGKFEVTIFDLGGGKRIRGIWKNYYAESYGVIFVVDSSDEERMEETKETMSEVLRHPRISGKPVLVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAVLGYGKKIDKSIKKGLYWLLHIIARDFEALNERIQKDTTEQRALEEQEKRERAERVRKLQEERKQREEQAELDGTSDMAELDPEPMNPFQPIASVIIENEKKMEKEKKKQKMEKVSDGCHLKHKMEHEQIEPESKISDNGQKSNESGLVENYKKQLENEDETDQRSSESDNGKKKTKKLRMKRSHRVEPVNTDDSAPKSPTPPPPPPPIGWGTPKVTRLPKLEPLGETRHNDFYGKPLPPLAVRQRPNGDVHDVIS
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(3186601..3186677,3191987..3192055,3193042..3193158,3196125..3196338,3201939..3202044,3204066..3204268,3205318..3205423,3224720..3224969,3231061..3231131,3255862..3255920))
location: region:3186601-3255920:-1
so has part: feature:3255862-3255920:-1:exon
so has part: feature:3231061-3231131:-1:exon
so has part: feature:3224720-3224969:-1:exon
so has part: feature:3205318-3205423:-1:exon
so has part: feature:3204066-3204268:-1:exon
so has part: feature:3201939-3202044:-1:exon
so has part: feature:3196125-3196338:-1:exon
so has part: feature:3193042-3193158:-1:exon
so has part: feature:3191987-3192055:-1:exon
so has part: feature:3186601-3186677:-1:exon

XP_012616424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3255862-3255920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3231061-3231131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3224720-3224969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3205318-3205423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3204066-3204268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3201939-3202044:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3196125-3196338:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3193042-3193158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3191987-3192055:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3186601-3186677:-1:exon

ARL13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARL13B
product: ADP ribosylation factor like GTPase 13B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012760972.2
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(3186647..3186677,3187596..3187647,3193042..3193158,3196125..3196338,3201939..3202044,3204066..3204268,3205318..3205423,3224720..3224969,3231061..3231131,3255862..3256321))
location: region:3186647-3256321:-1
so has part: feature:3255862-3256321:-1:exon
so has part: feature:3231061-3231131:-1:exon
so has part: feature:3224720-3224969:-1:exon
so has part: feature:3205318-3205423:-1:exon
so has part: feature:3204066-3204268:-1:exon
so has part: feature:3201939-3202044:-1:exon
so has part: feature:3196125-3196338:-1:exon
so has part: feature:3193042-3193158:-1:exon
so has part: feature:3187596-3187647:-1:exon
so has part: feature:3186647-3186677:-1:exon

position:3186647:-1
position: 3186647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3256321:-1
position: 3256321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3255862-3256321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3231061-3231131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3224720-3224969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3205318-3205423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3204066-3204268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3201939-3202044:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3196125-3196338:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3193042-3193158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3187596-3187647:-1:exon

position:3187596:-1
position: 3187596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3187647:-1
position: 3187647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3186647-3186677:-1:exon

ARL13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARL13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13B isoform X3
translation: MFSLMANCCSWFKRWREPVRKVTLVMVGLDNAGKTATAKGIQGEHPEDVAPTVGFSKIDLRQGKFEVTIFDLGGGKRIRGIWKNYYAESYGVIFVVDSSDEERMEETKETMSEVLRHPRISGKPVLVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAVLGYGKKIDKSIKKGLYWLLHIIARDFEALNERIQKDTTEQRALEEQEKRERAERVRKLQEERKQREEQAELDGTSDMAELDPEPMNPFQPIASVIIENEKKMEKEKKKQKMEKVSDGCHLKHKMEHEQIEPESKISDNGQKSNESGLVENYKKQLENEDETDQRSSESDNGKKKTKKLRMKRSHRVEPVNTDDSAPKSPTPPPPPPPMILNTYASRIILR
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(3187607..3187647,3193042..3193158,3196125..3196338,3201939..3202044,3204066..3204268,3205318..3205423,3224720..3224969,3231061..3231131,3255862..3255920))
location: region:3187607-3255920:-1
so has part: feature:3255862-3255920:-1:exon
so has part: feature:3231061-3231131:-1:exon
so has part: feature:3224720-3224969:-1:exon
so has part: feature:3205318-3205423:-1:exon
so has part: feature:3204066-3204268:-1:exon
so has part: feature:3201939-3202044:-1:exon
so has part: feature:3196125-3196338:-1:exon
so has part: feature:3193042-3193158:-1:exon
so has part: feature:3187607-3187647:-1:exon

XP_012616426.1
type: Protein
SIO_000068: ncbiprotein

position:3187607:-1
position: 3187607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3255862-3255920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3231061-3231131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3224720-3224969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3205318-3205423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3204066-3204268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3201939-3202044:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3196125-3196338:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3193042-3193158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3187607-3187647:-1:exon

STX19
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: STX19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3209679..3223403
location: region:3209679-3223403:1
so has part: feature:3209679-3223403:1:exon
subclass of: SO_0000010

105869293
type: Gene
SIO_000068: ncbigene

position:3209679:1
position: 3209679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3223403:1
position: 3223403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3209679-3223403:1:exon

STX19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: STX19
product: syntaxin 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012760974.1
SIO_010081: STX19
subclass of: SO_0000673
so part of: STX19
location: join(3209679..3210336,3220033..3223403)
location: region:3209679-3223403:1
so has part: feature:3209679-3210336:1:exon
so has part: feature:3220033-3223403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3209679-3210336:1:exon

position:3210336:1
position: 3210336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3220033-3223403:1:exon

position:3220033:1
position: 3220033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STX19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: STX19
product: syntaxin 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012760975.1
SIO_010081: STX19
subclass of: SO_0000673
so part of: STX19
location: join(3209679..3210336,3220036..3223403)
location: region:3209679-3223403:1
so has part: feature:3209679-3210336:1:exon
so has part: feature:3220036-3223403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3209679-3210336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3220036-3223403:1:exon

position:3220036:1
position: 3220036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STX19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: STX19
product: syntaxin 19, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012760976.2
SIO_010081: STX19
subclass of: SO_0000673
so part of: STX19
location: join(3209679..3210091,3210284..3210336,3220036..3223403)
location: region:3209679-3223403:1
so has part: feature:3209679-3210091:1:exon
so has part: feature:3210284-3210336:1:exon
so has part: feature:3220036-3223403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3209679-3210091:1:exon

position:3210091:1
position: 3210091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3210284-3210336:1:exon

position:3210284:1
position: 3210284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3220036-3223403:1:exon

STX19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: STX19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-19 isoform X1
translation: MKTLHEMIFRFSLKAGLQHRRWKTNKRNKTERRKGKMKDRLQELKQRTKEIELSRESHMSTTEEEQGVFLQQAVIYEREPVAERHLHEIQKLQESINNLADNVQKFGQQQKSLVASMRRFSLLKKESSITKEIKIQAEHINRSLDDLVKEVKKSEIENGPSSVVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFIFRQLEVAGKEVPEEEVNDMLHQGKWEVFNESLLTEINITKAQLSEIEQRHKELVNLENQIKDLRDLFIQISLLVEEQGESINNIEMIVNSTKEYVNNTKEKFGLAVKYKKRNPCRVLCCCCCPCCGSK
SIO_010081: STX19
subclass of: SO_0000673
so part of: STX19
location: join(3210242..3210336,3220033..3220927)
location: region:3210242-3220927:1
so has part: feature:3210242-3210336:1:exon
so has part: feature:3220033-3220927:1:exon

XP_012616428.1
type: Protein
SIO_000068: ncbiprotein

position:3210242:1
position: 3210242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3220927:1
position: 3220927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3210242-3210336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3220033-3220927:1:exon

STX19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: STX19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-19 isoform X2
translation: MKTLHEMIFRFSLKAGLQHRRWKTNKRNKTERKGKMKDRLQELKQRTKEIELSRESHMSTTEEEQGVFLQQAVIYEREPVAERHLHEIQKLQESINNLADNVQKFGQQQKSLVASMRRFSLLKKESSITKEIKIQAEHINRSLDDLVKEVKKSEIENGPSSVVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFIFRQLEVAGKEVPEEEVNDMLHQGKWEVFNESLLTEINITKAQLSEIEQRHKELVNLENQIKDLRDLFIQISLLVEEQGESINNIEMIVNSTKEYVNNTKEKFGLAVKYKKRNPCRVLCCCCCPCCGSK
SIO_010081: STX19
subclass of: SO_0000673
so part of: STX19
location: join(3210242..3210336,3220036..3220927)
location: region:3210242-3220927:1
so has part: feature:3210242-3210336:1:exon
so has part: feature:3220036-3220927:1:exon

XP_012616429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3210242-3210336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3220036-3220927:1:exon

STX19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: STX19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-19 isoform X3
translation: MKDRLQELKQRTKEIELSRESHMSTTEEEQGVFLQQAVIYEREPVAERHLHEIQKLQESINNLADNVQKFGQQQKSLVASMRRFSLLKKESSITKEIKIQAEHINRSLDDLVKEVKKSEIENGPSSVVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFIFRQLEVAGKEVPEEEVNDMLHQGKWEVFNESLLTEINITKAQLSEIEQRHKELVNLENQIKDLRDLFIQISLLVEEQGESINNIEMIVNSTKEYVNNTKEKFGLAVKYKKRNPCRVLCCCCCPCCGSK
SIO_010081: STX19
subclass of: SO_0000673
so part of: STX19
location: 3220046..3220927
location: region:3220046-3220927:1
so has part: feature:3220046-3220927:1:exon

XP_012616430.1
type: Protein
SIO_000068: ncbiprotein

position:3220046:1
position: 3220046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3220046-3220927:1:exon

PROS1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: PROS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3258662..3342487
location: region:3258662-3342487:1
so has part: feature:3258662-3342487:1:exon
subclass of: SO_0000010

105869291
type: Gene
SIO_000068: ncbigene

position:3258662:1
position: 3258662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3342487:1
position: 3342487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3258662-3342487:1:exon

PROS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PROS1
product: protein S (alpha), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 ESTs, 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284706.1
SIO_010081: PROS1
subclass of: SO_0000673
so part of: PROS1
location: join(3258662..3258754,3259846..3259915,3296365..3296522,3300180..3300204,3309631..3309717,3315272..3315394,3315494..3315625,3318405..3318530,3319469..3319590,3322585..3322700,3325660..3325849,3329788..3329955,3331617..3331785,3335489..3335637,3337652..3337877,3341117..3342173)
location: region:3258662-3342173:1
so has part: feature:3258662-3258754:1:exon
so has part: feature:3259846-3259915:1:exon
so has part: feature:3296365-3296522:1:exon
so has part: feature:3300180-3300204:1:exon
so has part: feature:3309631-3309717:1:exon
so has part: feature:3315272-3315394:1:exon
so has part: feature:3315494-3315625:1:exon
so has part: feature:3318405-3318530:1:exon
so has part: feature:3319469-3319590:1:exon
so has part: feature:3322585-3322700:1:exon
so has part: feature:3325660-3325849:1:exon
so has part: feature:3329788-3329955:1:exon
so has part: feature:3331617-3331785:1:exon
so has part: feature:3335489-3335637:1:exon
so has part: feature:3337652-3337877:1:exon
so has part: feature:3341117-3342173:1:exon

position:3342173:1
position: 3342173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3258662-3258754:1:exon

position:3258754:1
position: 3258754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3259846-3259915:1:exon

position:3259846:1
position: 3259846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3259915:1
position: 3259915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3296365-3296522:1:exon

position:3296365:1
position: 3296365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3296522:1
position: 3296522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3300180-3300204:1:exon

position:3300180:1
position: 3300180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3300204:1
position: 3300204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3309631-3309717:1:exon

position:3309631:1
position: 3309631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3309717:1
position: 3309717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3315272-3315394:1:exon

position:3315272:1
position: 3315272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3315394:1
position: 3315394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3315494-3315625:1:exon

position:3315494:1
position: 3315494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3315625:1
position: 3315625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3318405-3318530:1:exon

position:3318405:1
position: 3318405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3318530:1
position: 3318530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3319469-3319590:1:exon

position:3319469:1
position: 3319469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3319590:1
position: 3319590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3322585-3322700:1:exon

position:3322585:1
position: 3322585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3322700:1
position: 3322700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3325660-3325849:1:exon

position:3325660:1
position: 3325660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3325849:1
position: 3325849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3329788-3329955:1:exon

position:3329788:1
position: 3329788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3329955:1
position: 3329955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3331617-3331785:1:exon

position:3331617:1
position: 3331617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3331785:1
position: 3331785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3335489-3335637:1:exon

position:3335489:1
position: 3335489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3335637:1
position: 3335637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3337652-3337877:1:exon

position:3337652:1
position: 3337652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3337877:1
position: 3337877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3341117-3342173:1:exon

position:3341117:1
position: 3341117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PROS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PROS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin K-dependent protein S isoform X1
translation: MWIFLSVSGTILNTVFSKNTHNTSFIVCEKVIPMPLKSGMPCALLCPVKFLSKQHASQVLVRKRRANSLLEETKQGNLERECIEELCNKEEAREVFENDPETDYFYPKYLGCLGSFRAGLFTAARQSTNAHPDLRSCVNAIPDQCNPLPCNEDGYINCRDGQATFTCICKSGWQGERCEFDINECKDPSNINGGCSQICDNTPGSYHCSCKSGFVMLSNKKDCKDMDECSMKPSICGTAVCKNIPGDFECECPEGYRYDPKSKSCEDVDECSENMCAQLCINYPGGYSCYCDGKKGFKLAHDQKSCEAVPVCLPLNLNKNYELLYLAEQFVGVVLYLKFHLPEVTRFSAEFDFRTYDSEGVILYAESLDHSAWFLIALRDGKIEIQFKNEYTTKITIGGKVINNGLWNMVSVEELEHSVSVKIAKEAVMNINKPGSLFNPTNGFLETKVYFAGFPRKVENALIKQINPRLDGCIRGWNLMNQGASGVKEIIQEKQNKHCLVAVEKGSYYPGSGVAQFSIDYNNISSAEGWQVNVTLNIRPSAGTGIMLALVSGNTVPFALSLVDSTSEKFQDILVSVENTVILQIEAMSLCSGQQSFLEFRVNRNNLKVWTPLQEYTISSAHFERQFAILDKAMKGTVATYLGGIPDVPFNATPVNAFYNGCMETNINGVQLDLDEAISKHNDIRAHSCPSVQKDTKNS
SIO_010081: PROS1
subclass of: SO_0000673
so part of: PROS1
location: join(3258677..3258754,3259846..3259915,3296365..3296522,3300180..3300204,3309631..3309717,3315272..3315394,3315494..3315625,3318405..3318530,3319469..3319590,3322585..3322700,3325660..3325849,3329788..3329955,3331617..3331785,3335489..3335637,3337652..3337877,3341117..3341277)
location: region:3258677-3341277:1
so has part: feature:3258677-3258754:1:exon
so has part: feature:3259846-3259915:1:exon
so has part: feature:3296365-3296522:1:exon
so has part: feature:3300180-3300204:1:exon
so has part: feature:3309631-3309717:1:exon
so has part: feature:3315272-3315394:1:exon
so has part: feature:3315494-3315625:1:exon
so has part: feature:3318405-3318530:1:exon
so has part: feature:3319469-3319590:1:exon
so has part: feature:3322585-3322700:1:exon
so has part: feature:3325660-3325849:1:exon
so has part: feature:3329788-3329955:1:exon
so has part: feature:3331617-3331785:1:exon
so has part: feature:3335489-3335637:1:exon
so has part: feature:3337652-3337877:1:exon
so has part: feature:3341117-3341277:1:exon

XP_020140295.1
type: Protein
SIO_000068: ncbiprotein

position:3258677:1
position: 3258677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3341277:1
position: 3341277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3258677-3258754:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3259846-3259915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3296365-3296522:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3300180-3300204:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3309631-3309717:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3315272-3315394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3315494-3315625:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3318405-3318530:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3319469-3319590:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3322585-3322700:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3325660-3325849:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3329788-3329955:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3331617-3331785:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3335489-3335637:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3337652-3337877:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3341117-3341277:1:exon

PROS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PROS1
product: protein S (alpha), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 77 ESTs, 11 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_020284707.1
SIO_010081: PROS1
subclass of: SO_0000673
so part of: PROS1
location: join(3264566..3264976,3296365..3296522,3300180..3300204,3309631..3309717,3315272..3315394,3315494..3315625,3318405..3318530,3319469..3319590,3322585..3322700,3325660..3325849,3329788..3329955,3331617..3331785,3335489..3335637,3337652..3337877,3341117..3342487)
location: region:3264566-3342487:1
so has part: feature:3264566-3264976:1:exon
so has part: feature:3296365-3296522:1:exon
so has part: feature:3300180-3300204:1:exon
so has part: feature:3309631-3309717:1:exon
so has part: feature:3315272-3315394:1:exon
so has part: feature:3315494-3315625:1:exon
so has part: feature:3318405-3318530:1:exon
so has part: feature:3319469-3319590:1:exon
so has part: feature:3322585-3322700:1:exon
so has part: feature:3325660-3325849:1:exon
so has part: feature:3329788-3329955:1:exon
so has part: feature:3331617-3331785:1:exon
so has part: feature:3335489-3335637:1:exon
so has part: feature:3337652-3337877:1:exon
so has part: feature:3341117-3342487:1:exon

position:3264566:1
position: 3264566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3264566-3264976:1:exon

position:3264976:1
position: 3264976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3296365-3296522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3300180-3300204:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3309631-3309717:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3315272-3315394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3315494-3315625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3318405-3318530:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3319469-3319590:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3322585-3322700:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3325660-3325849:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3329788-3329955:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3331617-3331785:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3335489-3335637:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3337652-3337877:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3341117-3342487:1:exon

PROS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PROS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin K-dependent protein S isoform X2
translation: MRVSRGRCAALLACLALVLSVSEASFLSKQHASQVLVRKRRANSLLEETKQGNLERECIEELCNKEEAREVFENDPETDYFYPKYLGCLGSFRAGLFTAARQSTNAHPDLRSCVNAIPDQCNPLPCNEDGYINCRDGQATFTCICKSGWQGERCEFDINECKDPSNINGGCSQICDNTPGSYHCSCKSGFVMLSNKKDCKDMDECSMKPSICGTAVCKNIPGDFECECPEGYRYDPKSKSCEDVDECSENMCAQLCINYPGGYSCYCDGKKGFKLAHDQKSCEAVPVCLPLNLNKNYELLYLAEQFVGVVLYLKFHLPEVTRFSAEFDFRTYDSEGVILYAESLDHSAWFLIALRDGKIEIQFKNEYTTKITIGGKVINNGLWNMVSVEELEHSVSVKIAKEAVMNINKPGSLFNPTNGFLETKVYFAGFPRKVENALIKQINPRLDGCIRGWNLMNQGASGVKEIIQEKQNKHCLVAVEKGSYYPGSGVAQFSIDYNNISSAEGWQVNVTLNIRPSAGTGIMLALVSGNTVPFALSLVDSTSEKFQDILVSVENTVILQIEAMSLCSGQQSFLEFRVNRNNLKVWTPLQEYTISSAHFERQFAILDKAMKGTVATYLGGIPDVPFNATPVNAFYNGCMETNINGVQLDLDEAISKHNDIRAHSCPSVQKDTKNS
SIO_010081: PROS1
subclass of: SO_0000673
so part of: PROS1
location: join(3264901..3264976,3296365..3296522,3300180..3300204,3309631..3309717,3315272..3315394,3315494..3315625,3318405..3318530,3319469..3319590,3322585..3322700,3325660..3325849,3329788..3329955,3331617..3331785,3335489..3335637,3337652..3337877,3341117..3341277)
location: region:3264901-3341277:1
so has part: feature:3264901-3264976:1:exon
so has part: feature:3296365-3296522:1:exon
so has part: feature:3300180-3300204:1:exon
so has part: feature:3309631-3309717:1:exon
so has part: feature:3315272-3315394:1:exon
so has part: feature:3315494-3315625:1:exon
so has part: feature:3318405-3318530:1:exon
so has part: feature:3319469-3319590:1:exon
so has part: feature:3322585-3322700:1:exon
so has part: feature:3325660-3325849:1:exon
so has part: feature:3329788-3329955:1:exon
so has part: feature:3331617-3331785:1:exon
so has part: feature:3335489-3335637:1:exon
so has part: feature:3337652-3337877:1:exon
so has part: feature:3341117-3341277:1:exon

XP_020140296.1
type: Protein
SIO_000068: ncbiprotein

position:3264901:1
position: 3264901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3264901-3264976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3296365-3296522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3300180-3300204:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3309631-3309717:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3315272-3315394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3315494-3315625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3318405-3318530:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3319469-3319590:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3322585-3322700:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3325660-3325849:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3329788-3329955:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3331617-3331785:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3335489-3335637:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3337652-3337877:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3341117-3341277:1:exon

LOC105869271
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3265167..3295091
location: region:3265167-3295091:1
so has part: feature:3265167-3295091:1:exon

105869271
type: Gene
SIO_000068: ncbigene

position:3265167:1
position: 3265167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3295091:1
position: 3295091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3265167-3295091:1:exon

LOC105869271
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105869271
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105869271
subclass of: SO_0000673
so part of: LOC105869271
location: 3265167..3265280
location: region:3265167-3265280:1
so has part: feature:3265167-3265280:1:exon

position:3265280:1
position: 3265280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3265167-3265280:1:exon

LOC105869271
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105869271
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105869271
subclass of: SO_0000673
so part of: LOC105869271
location: 3293555..3295091
location: region:3293555-3295091:1
so has part: feature:3293555-3295091:1:exon

position:3293555:1
position: 3293555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3293555-3295091:1:exon

LOC105869294
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869294
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3343335..3347974
location: region:3343335-3347974:1
so has part: feature:3343335-3347974:1:exon
subclass of: SO_0000011

105869294
type: Gene
SIO_000068: ncbigene

position:3343335:1
position: 3343335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3347974:1
position: 3347974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3343335-3347974:1:exon

LOC105869294
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869294
product: uncharacterized LOC105869294
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001153099.2
SIO_010081: LOC105869294
subclass of: SO_0000673
so part of: LOC105869294
location: join(3343335..3345096,3347265..3347974)
location: region:3343335-3347974:1
so has part: feature:3343335-3345096:1:exon
so has part: feature:3347265-3347974:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3343335-3345096:1:exon

position:3345096:1
position: 3345096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3347265-3347974:1:exon

position:3347265:1
position: 3347265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EPHA3
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: EPHA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3988711..4328480)
location: region:3988711-4328480:-1
so has part: feature:3988711-4328480:-1:exon
subclass of: SO_0000010

105863647
type: Gene
SIO_000068: ncbigene

position:3988711:-1
position: 3988711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4328480:-1
position: 4328480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3988711-4328480:-1:exon

EPHA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: EPHA3
product: EPH receptor A3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 57 ESTs, 25 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012750987.1
SIO_010081: EPHA3
subclass of: SO_0000673
so part of: EPHA3
location: complement(join(3988711..3991440,3997849..3998004,4012297..4012490,4013291..4013440,4029556..4029765,4031382..4031443,4041130..4041315,4046458..4046583,4051641..4051708,4052401..4052503,4059302..4059464,4062332..4062456,4100443..4100778,4101473..4101628,4230604..4231264,4304959..4305023,4328169..4328480))
location: region:3988711-4328480:-1
so has part: feature:4328169-4328480:-1:exon
so has part: feature:4304959-4305023:-1:exon
so has part: feature:4230604-4231264:-1:exon
so has part: feature:4101473-4101628:-1:exon
so has part: feature:4100443-4100778:-1:exon
so has part: feature:4062332-4062456:-1:exon
so has part: feature:4059302-4059464:-1:exon
so has part: feature:4052401-4052503:-1:exon
so has part: feature:4051641-4051708:-1:exon
so has part: feature:4046458-4046583:-1:exon
so has part: feature:4041130-4041315:-1:exon
so has part: feature:4031382-4031443:-1:exon
so has part: feature:4029556-4029765:-1:exon
so has part: feature:4013291-4013440:-1:exon
so has part: feature:4012297-4012490:-1:exon
so has part: feature:3997849-3998004:-1:exon
so has part: feature:3988711-3991440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4328169-4328480:-1:exon

position:4328169:-1
position: 4328169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4304959-4305023:-1:exon

position:4304959:-1
position: 4304959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4305023:-1
position: 4305023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4230604-4231264:-1:exon

position:4230604:-1
position: 4230604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4231264:-1
position: 4231264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4101473-4101628:-1:exon

position:4101473:-1
position: 4101473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4101628:-1
position: 4101628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4100443-4100778:-1:exon

position:4100443:-1
position: 4100443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4100778:-1
position: 4100778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4062332-4062456:-1:exon

position:4062332:-1
position: 4062332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4062456:-1
position: 4062456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4059302-4059464:-1:exon

position:4059302:-1
position: 4059302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4059464:-1
position: 4059464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4052401-4052503:-1:exon

position:4052401:-1
position: 4052401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4052503:-1
position: 4052503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4051641-4051708:-1:exon

position:4051641:-1
position: 4051641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4051708:-1
position: 4051708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4046458-4046583:-1:exon

position:4046458:-1
position: 4046458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4046583:-1
position: 4046583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4041130-4041315:-1:exon

position:4041130:-1
position: 4041130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4041315:-1
position: 4041315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4031382-4031443:-1:exon

position:4031382:-1
position: 4031382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4031443:-1
position: 4031443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4029556-4029765:-1:exon

position:4029556:-1
position: 4029556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4029765:-1
position: 4029765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4013291-4013440:-1:exon

position:4013291:-1
position: 4013291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4013440:-1
position: 4013440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4012297-4012490:-1:exon

position:4012297:-1
position: 4012297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4012490:-1
position: 4012490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3997849-3998004:-1:exon

position:3997849:-1
position: 3997849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3998004:-1
position: 3998004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3988711-3991440:-1:exon

position:3991440:-1
position: 3991440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPHA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: EPHA3
product: EPH receptor A3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 57 ESTs, 25 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012750988.1
SIO_010081: EPHA3
subclass of: SO_0000673
so part of: EPHA3
location: complement(join(3988711..3991440,3997849..3998004,4012297..4012490,4013291..4013440,4029556..4029765,4031382..4031443,4041130..4041315,4046458..4046583,4051641..4051708,4052401..4052503,4059302..4059461,4062332..4062456,4100443..4100778,4101473..4101628,4230604..4231264,4304959..4305023,4328169..4328384))
location: region:3988711-4328384:-1
so has part: feature:4328169-4328384:-1:exon
so has part: feature:4304959-4305023:-1:exon
so has part: feature:4230604-4231264:-1:exon
so has part: feature:4101473-4101628:-1:exon
so has part: feature:4100443-4100778:-1:exon
so has part: feature:4062332-4062456:-1:exon
so has part: feature:4059302-4059461:-1:exon
so has part: feature:4052401-4052503:-1:exon
so has part: feature:4051641-4051708:-1:exon
so has part: feature:4046458-4046583:-1:exon
so has part: feature:4041130-4041315:-1:exon
so has part: feature:4031382-4031443:-1:exon
so has part: feature:4029556-4029765:-1:exon
so has part: feature:4013291-4013440:-1:exon
so has part: feature:4012297-4012490:-1:exon
so has part: feature:3997849-3998004:-1:exon
so has part: feature:3988711-3991440:-1:exon

position:4328384:-1
position: 4328384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4328169-4328384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4304959-4305023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4230604-4231264:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4101473-4101628:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4100443-4100778:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4062332-4062456:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4059302-4059461:-1:exon

position:4059461:-1
position: 4059461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4052401-4052503:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4051641-4051708:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4046458-4046583:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4041130-4041315:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4031382-4031443:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4029556-4029765:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4013291-4013440:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4012297-4012490:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3997849-3998004:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3988711-3991440:-1:exon

EPHA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: EPHA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 3 isoform X2
translation: MDCHLSILLLLSCSVLSCFGELILQPSNEVNLLDSKTIQGELGWISYPSHGWEEISGVDEHYTPIRTYQVCNVMDHSQNNWLRTNWVPRNSAQKIYVELKFTLRDCNSIPLVLGTCKETFNLYYMESDDDHGVKFREHQFTKIDTIAADESFTQMDLGDRILKLNTEIREVGPVNKKGFYLAFQDVGACVALVSVRVYFKKCPFTVKNLAMFPDTVPMDSQSLVEVRGSCVNNSKEEDPPRMYCSTEGEWLVPIGKCSCNAGYEERGLMCQACRPGFYKASDGNMKCAKCPPHSSTHEDGSMHCRCENNYFRADKDPPSMACTRPPSAPRNVISNINETSVILDWSWPLDTGGRKDVTFNIICKKCGWNVKQCEPCSPNVRFLPRQFGLTNTTVTVTDLLAHTNYTFEIDAINGVSELSSPPRQFAAVSITTNQAAPSPVMTIKKDRTSRNSISLSWQEPEHPNGIILDYEVKYYEKEQETSYTILRARGTNVTISSLKPDTTYVFQIRARTAAGYGTNSRKFEFETSPDSFSISGENSQVVMIAISAAVAIILLTVVIYVLIGRFCGYNKSKHGADEKRLHFGNGHLKLPGLRTYVDPHTYEDPTQAVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDWLNGIRTAHCKEIFTGVEYSSCDTIAKISTDDMKKVGVTVVGPQKKIISSIKALETQSKNGPVPV
SIO_010081: EPHA3
subclass of: SO_0000673
so part of: EPHA3
location: complement(join(3991335..3991440,3997849..3998004,4012297..4012490,4013291..4013440,4029556..4029765,4031382..4031443,4041130..4041315,4046458..4046583,4051641..4051708,4052401..4052503,4059302..4059461,4062332..4062456,4100443..4100778,4101473..4101628,4230604..4231264,4304959..4305023,4328169..4328256))
location: region:3991335-4328256:-1
so has part: feature:4328169-4328256:-1:exon
so has part: feature:4304959-4305023:-1:exon
so has part: feature:4230604-4231264:-1:exon
so has part: feature:4101473-4101628:-1:exon
so has part: feature:4100443-4100778:-1:exon
so has part: feature:4062332-4062456:-1:exon
so has part: feature:4059302-4059461:-1:exon
so has part: feature:4052401-4052503:-1:exon
so has part: feature:4051641-4051708:-1:exon
so has part: feature:4046458-4046583:-1:exon
so has part: feature:4041130-4041315:-1:exon
so has part: feature:4031382-4031443:-1:exon
so has part: feature:4029556-4029765:-1:exon
so has part: feature:4013291-4013440:-1:exon
so has part: feature:4012297-4012490:-1:exon
so has part: feature:3997849-3998004:-1:exon
so has part: feature:3991335-3991440:-1:exon

XP_012606442.1
type: Protein
SIO_000068: ncbiprotein

position:3991335:-1
position: 3991335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4328256:-1
position: 4328256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4328169-4328256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4304959-4305023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4230604-4231264:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4101473-4101628:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4100443-4100778:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4062332-4062456:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4059302-4059461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4052401-4052503:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4051641-4051708:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4046458-4046583:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4041130-4041315:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4031382-4031443:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4029556-4029765:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4013291-4013440:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4012297-4012490:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3997849-3998004:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3991335-3991440:-1:exon

EPHA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: EPHA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 3 isoform X1
translation: MDCHLSILLLLSCSVLSCFGELILQPSNEVNLLDSKTIQGELGWISYPSHGWEEISGVDEHYTPIRTYQVCNVMDHSQNNWLRTNWVPRNSAQKIYVELKFTLRDCNSIPLVLGTCKETFNLYYMESDDDHGVKFREHQFTKIDTIAADESFTQMDLGDRILKLNTEIREVGPVNKKGFYLAFQDVGACVALVSVRVYFKKCPFTVKNLAMFPDTVPMDSQSLVEVRGSCVNNSKEEDPPRMYCSTEGEWLVPIGKCSCNAGYEERGLMCQACRPGFYKASDGNMKCAKCPPHSSTHEDGSMHCRCENNYFRADKDPPSMACTRPPSAPRNVISNINETSVILDWSWPLDTGGRKDVTFNIICKKCGWNVKQCEPCSPNVRFLPRQFGLTNTTVTVTDLLAHTNYTFEIDAINGVSELSSPPRQFAAVSITTNQAAPSPVMTIKKDRTSRNSISLSWQEPEHPNGIILDYEVKYYEKQEQETSYTILRARGTNVTISSLKPDTTYVFQIRARTAAGYGTNSRKFEFETSPDSFSISGENSQVVMIAISAAVAIILLTVVIYVLIGRFCGYNKSKHGADEKRLHFGNGHLKLPGLRTYVDPHTYEDPTQAVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDWLNGIRTAHCKEIFTGVEYSSCDTIAKISTDDMKKVGVTVVGPQKKIISSIKALETQSKNGPVPV
SIO_010081: EPHA3
subclass of: SO_0000673
so part of: EPHA3
location: complement(join(3991335..3991440,3997849..3998004,4012297..4012490,4013291..4013440,4029556..4029765,4031382..4031443,4041130..4041315,4046458..4046583,4051641..4051708,4052401..4052503,4059302..4059464,4062332..4062456,4100443..4100778,4101473..4101628,4230604..4231264,4304959..4305023,4328169..4328256))
location: region:3991335-4328256:-1
so has part: feature:4328169-4328256:-1:exon
so has part: feature:4304959-4305023:-1:exon
so has part: feature:4230604-4231264:-1:exon
so has part: feature:4101473-4101628:-1:exon
so has part: feature:4100443-4100778:-1:exon
so has part: feature:4062332-4062456:-1:exon
so has part: feature:4059302-4059464:-1:exon
so has part: feature:4052401-4052503:-1:exon
so has part: feature:4051641-4051708:-1:exon
so has part: feature:4046458-4046583:-1:exon
so has part: feature:4041130-4041315:-1:exon
so has part: feature:4031382-4031443:-1:exon
so has part: feature:4029556-4029765:-1:exon
so has part: feature:4013291-4013440:-1:exon
so has part: feature:4012297-4012490:-1:exon
so has part: feature:3997849-3998004:-1:exon
so has part: feature:3991335-3991440:-1:exon

XP_012606441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4328169-4328256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4304959-4305023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4230604-4231264:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4101473-4101628:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4100443-4100778:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4062332-4062456:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4059302-4059464:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4052401-4052503:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4051641-4051708:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4046458-4046583:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4041130-4041315:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4031382-4031443:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4029556-4029765:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4013291-4013440:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4012297-4012490:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3997849-3998004:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3991335-3991440:-1:exon

LOC105863648
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105863648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4866612..4988830)
location: region:4866612-4988830:-1
so has part: feature:4866612-4988830:-1:exon
subclass of: SO_0000010

105863648
type: Gene
SIO_000068: ncbigene

position:4866612:-1
position: 4866612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4988830:-1
position: 4988830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4866612-4988830:-1:exon

LOC105863648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105863648
product: mucin-5AC, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012750992.2
SIO_010081: LOC105863648
subclass of: SO_0000673
so part of: LOC105863648
location: complement(join(4866612..4866727,4869056..4871355,4915337..4915462,4920456..4920618,4934392..4934542,4988584..4988830))
location: region:4866612-4988830:-1
so has part: feature:4988584-4988830:-1:exon
so has part: feature:4934392-4934542:-1:exon
so has part: feature:4920456-4920618:-1:exon
so has part: feature:4915337-4915462:-1:exon
so has part: feature:4869056-4871355:-1:exon
so has part: feature:4866612-4866727:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4988584-4988830:-1:exon

position:4988584:-1
position: 4988584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4934392-4934542:-1:exon

position:4934392:-1
position: 4934392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4934542:-1
position: 4934542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4920456-4920618:-1:exon

position:4920456:-1
position: 4920456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4920618:-1
position: 4920618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4915337-4915462:-1:exon

position:4915337:-1
position: 4915337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4915462:-1
position: 4915462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4869056-4871355:-1:exon

position:4869056:-1
position: 4869056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4871355:-1
position: 4871355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4866612-4866727:-1:exon

position:4866727:-1
position: 4866727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105863648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105863648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-5AC isoform X2
translation: MVPLAYYGQHFVPLDHSYQLATTNSLTHKYTSEKLNQLDNRPAAKVQSCSHHLAGSPLSSNKKVQSCSILPSPKSQHKLSQKLYNRALKSPLSHSTHQVTRSVNLHCRSSLLPSQRAVNSPLSHPKAQTTSSPHLNKTSSALKPNQTASRSRLPFPKPQTTSSSLDFCWTSSSLKSNQRTPSSSLTSLQNQDIPSLNTIWTSASLGTNQRALSSTLLQSKPQKTSSLDGLWTLLDHNQKSLSSPSLDTKHQSNDFLRTSPSLEPNQKALISPLPDSRPQKSSILSSKPSVLSLPLSYPRARKSSLPHSARQSQSLPLFQVKSQTVLKLDHNFQSPSSPICHSKFQNTALPNDKNRTTDLPSPYPKPSVSGQSLSSSKHCIRNTTASTLKSRLQSKTSFTFCAKTESNKEVPWILGYNQPYIVKGGTVPDDVVNKIVNSISKTKIQRDLCRQIIFRRMRGRPNPHPGPRLSSNYMVCLACASCIKSQCSHLTGKKDPRCATLYVIPTPQANSEGKIEVKLNFTLSLPETSFSSYLPFPMKENQTDGAPEENVEGVEKISQLLPTSESDIIQGLDRKKKLLTEAPENKVISQQPQAIDWLLYVKKSSNSQPQPRLPSSSSYSSSSSSSSSSAASACSASSSSSSSSSSTSPSSPPPLEDTTTSSRSDCILTKVKLHEQRSCVNFVHR
SIO_010081: LOC105863648
subclass of: SO_0000673
so part of: LOC105863648
location: complement(join(4866680..4866727,4869056..4871065))
location: region:4866680-4871065:-1
so has part: feature:4869056-4871065:-1:exon
so has part: feature:4866680-4866727:-1:exon

XP_012606446.1
type: Protein
SIO_000068: ncbiprotein

position:4866680:-1
position: 4866680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4871065:-1
position: 4871065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4869056-4871065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4866680-4866727:-1:exon

LOC105863648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105863648
product: mucin-5AC, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012750991.2
SIO_010081: LOC105863648
subclass of: SO_0000673
so part of: LOC105863648
location: complement(join(4868814..4871355,4915337..4915462,4920456..4920618,4988584..4988830))
location: region:4868814-4988830:-1
so has part: feature:4988584-4988830:-1:exon
so has part: feature:4920456-4920618:-1:exon
so has part: feature:4915337-4915462:-1:exon
so has part: feature:4868814-4871355:-1:exon

position:4868814:-1
position: 4868814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4988584-4988830:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4920456-4920618:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4915337-4915462:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4868814-4871355:-1:exon

LOC105863648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105863648
product: mucin-5AC, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012750990.2
SIO_010081: LOC105863648
subclass of: SO_0000673
so part of: LOC105863648
location: complement(join(4868814..4871355,4915337..4915462,4920456..4920618,4934392..4934542,4988584..4988830))
location: region:4868814-4988830:-1
so has part: feature:4988584-4988830:-1:exon
so has part: feature:4934392-4934542:-1:exon
so has part: feature:4920456-4920618:-1:exon
so has part: feature:4915337-4915462:-1:exon
so has part: feature:4868814-4871355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4988584-4988830:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4934392-4934542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4920456-4920618:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4915337-4915462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4868814-4871355:-1:exon

LOC105863648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105863648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-5AC isoform X1
translation: MVPLAYYGQHFVPLDHSYQLATTNSLTHKYTSEKLNQLDNRPAAKVQSCSHHLAGSPLSSNKKVQSCSILPSPKSQHKLSQKLYNRALKSPLSHSTHQVTRSVNLHCRSSLLPSQRAVNSPLSHPKAQTTSSPHLNKTSSALKPNQTASRSRLPFPKPQTTSSSLDFCWTSSSLKSNQRTPSSSLTSLQNQDIPSLNTIWTSASLGTNQRALSSTLLQSKPQKTSSLDGLWTLLDHNQKSLSSPSLDTKHQSNDFLRTSPSLEPNQKALISPLPDSRPQKSSILSSKPSVLSLPLSYPRARKSSLPHSARQSQSLPLFQVKSQTVLKLDHNFQSPSSPICHSKFQNTALPNDKNRTTDLPSPYPKPSVSGQSLSSSKHCIRNTTASTLKSRLQSKTSFTFCAKTESNKEVPWILGYNQPYIVKGGTVPDDVVNKIVNSISKTKIQRDLCRQIIFRRMRGRPNPHPGPRLSSNYMVCLACASCIKSQCSHLTGKKDPRCATLYVIPTPQANSEGKIEVKLNFTLSLPETSFSSYLPFPMKENQTDGAPEENVEGVEKISQLLPTSESDIIQGLDRKKKLLTEAPENKVISQQPQAIDWLLYVKKSSNSQPQPRLPSSSSYSSSSSSSSSSAASACSASSSSSSSSSSTSPSSPPPLEDTTTSSRSDCILTKVLSSHRLPPGVSWLEFIYSKDHQPLPEKPYQSRSSLLQTKPVRSSKALRGTKGPNIPFKFSRQSLKVRNTD
SIO_010081: LOC105863648
subclass of: SO_0000673
so part of: LOC105863648
location: complement(4868840..4871065)
location: region:4868840-4871065:-1
so has part: feature:4868840-4871065:-1:exon

XP_012606444.1
type: Protein
SIO_000068: ncbiprotein

position:4868840:-1
position: 4868840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4868840-4871065:-1:exon

LOC105863648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105863648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-5AC isoform X1
translation: MVPLAYYGQHFVPLDHSYQLATTNSLTHKYTSEKLNQLDNRPAAKVQSCSHHLAGSPLSSNKKVQSCSILPSPKSQHKLSQKLYNRALKSPLSHSTHQVTRSVNLHCRSSLLPSQRAVNSPLSHPKAQTTSSPHLNKTSSALKPNQTASRSRLPFPKPQTTSSSLDFCWTSSSLKSNQRTPSSSLTSLQNQDIPSLNTIWTSASLGTNQRALSSTLLQSKPQKTSSLDGLWTLLDHNQKSLSSPSLDTKHQSNDFLRTSPSLEPNQKALISPLPDSRPQKSSILSSKPSVLSLPLSYPRARKSSLPHSARQSQSLPLFQVKSQTVLKLDHNFQSPSSPICHSKFQNTALPNDKNRTTDLPSPYPKPSVSGQSLSSSKHCIRNTTASTLKSRLQSKTSFTFCAKTESNKEVPWILGYNQPYIVKGGTVPDDVVNKIVNSISKTKIQRDLCRQIIFRRMRGRPNPHPGPRLSSNYMVCLACASCIKSQCSHLTGKKDPRCATLYVIPTPQANSEGKIEVKLNFTLSLPETSFSSYLPFPMKENQTDGAPEENVEGVEKISQLLPTSESDIIQGLDRKKKLLTEAPENKVISQQPQAIDWLLYVKKSSNSQPQPRLPSSSSYSSSSSSSSSSAASACSASSSSSSSSSSTSPSSPPPLEDTTTSSRSDCILTKVLSSHRLPPGVSWLEFIYSKDHQPLPEKPYQSRSSLLQTKPVRSSKALRGTKGPNIPFKFSRQSLKVRNTD
SIO_010081: LOC105863648
subclass of: SO_0000673
so part of: LOC105863648
location: complement(4868840..4871065)
location: region:4868840-4871065:-1
so has part: feature:4868840-4871065:-1:exon

XP_012606445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4868840-4871065:-1:exon

LOC105863646
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105863646
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5086539..5087421
location: region:5086539-5087421:1
so has part: feature:5086539-5087421:1:exon
subclass of: SO_0000010

105863646
type: Gene
SIO_000068: ncbigene

position:5086539:1
position: 5086539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5087421:1
position: 5087421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5086539-5087421:1:exon

LOC105863646
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105863646
product: ATP synthase subunit gamma, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 ESTs, 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012750986.2
SIO_010081: LOC105863646
subclass of: SO_0000673
so part of: LOC105863646
location: 5086539..5087421
location: region:5086539-5087421:1
so has part: feature:5086539-5087421:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5086539-5087421:1:exon

LOC105863646
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105863646
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit gamma, mitochondrial-like
translation: MKMVAAAKYARAERDLKPARVYGIGSLALYEKADIKVPEDKKKHLIIDVSSDRGLCGAIHSSVAKQMKTEVASLTAAGKEVMIVGIGEKIKGILYRTHSDQFLVAFKEVGRKSPTFGDASVIALELLNSGYEFDEGFIIFNRFRSVISYKTEEKPIFSLNTIASAETMSIYDDIDSDVLQNYHEYNLADIIYYSLKESTTSEQSARMIAMDNTSKNAPDMIDKLTLTFNRTHQAVITKELIEIISGAAALD
SIO_010081: LOC105863646
subclass of: SO_0000673
so part of: LOC105863646
location: 5086635..5087390
location: region:5086635-5087390:1
so has part: feature:5086635-5087390:1:exon

XP_012606440.2
type: Protein
SIO_000068: ncbiprotein

position:5086635:1
position: 5086635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5087390:1
position: 5087390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5086635-5087390:1:exon

C31H3orf38
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: C31H3orf38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5118317..>5151282)
location: region:5118317-5151282:-1
so has part: feature:5118317-5151282:-1:exon
subclass of: SO_0000010

105863642
type: Gene
SIO_000068: ncbigene

position:5118317:-1
position: 5118317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5151282:-1
position: 5151282
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5118317-5151282:-1:exon

C31H3orf38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: C31H3orf38
product: chromosome 31 C3orf38 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_020284685.1
SIO_010081: C31H3orf38
subclass of: SO_0000673
so part of: C31H3orf38
location: complement(join(5118317..5118520,5148712..5149359,5151031..>5151282))
location: region:5118317-5151282:-1
so has part: feature:5151031-5151282:-1:exon
so has part: feature:5148712-5149359:-1:exon
so has part: feature:5118317-5118520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5151031-5151282:-1:exon

position:5151031:-1
position: 5151031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5148712-5149359:-1:exon

position:5148712:-1
position: 5148712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5149359:-1
position: 5149359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5118317-5118520:-1:exon

position:5118520:-1
position: 5118520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C31H3orf38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: C31H3orf38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C3orf38 homolog
translation: FLLDAIHAILVYSQSVEELLRRKKVHREVIFKYLATQGVVTPPTTEKHNLIQHAKDYWQKQSQLKLKETPEPVTKTEDIRLFQQAKEDKKAEKVDFRRLGEEFCHWFFGLLNSQNPFQGPPQDEWGPQHFWHDVKLRFYYNTSEQNVIDYHGAEIVSLRLLSLVKEEFLFLSPNLDSRGLKCASSPHGLVMVGVAGTVHRRDTCLGIFEQIFGLIRCPFVENTWKIKFINLRIIGENSLAPGTLLKPAITFEQSDLEAFYNVITLCGTNDVQLNVKQALDSGTGDQALCGGNEALLNKRENHHNLLNLEEILENINLHHLPYEE
SIO_010081: C31H3orf38
subclass of: SO_0000673
so part of: C31H3orf38
location: complement(join(5118446..5118520,5148712..5149359,5151031..>5151282))
location: region:5118446-5151282:-1
so has part: feature:5151031-5151282:-1:exon
so has part: feature:5148712-5149359:-1:exon
so has part: feature:5118446-5118520:-1:exon

XP_020140274.1
type: Protein
SIO_000068: ncbiprotein

position:5118446:-1
position: 5118446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5151031-5151282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5148712-5149359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5118446-5118520:-1:exon

LOC105863645
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105863645
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5154189..5203965
location: region:5154189-5203965:1
so has part: feature:5154189-5203965:1:exon
subclass of: SO_0000011

105863645
type: Gene
SIO_000068: ncbigene

position:5154189:1
position: 5154189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5203965:1
position: 5203965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5154189-5203965:1:exon

LOC105863645
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105863645
product: uncharacterized LOC105863645, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001150564.2
SIO_010081: LOC105863645
subclass of: SO_0000673
so part of: LOC105863645
location: join(5154189..5154416,5163129..5163210,5201746..5201834,5203930..5203965)
location: region:5154189-5203965:1
so has part: feature:5154189-5154416:1:exon
so has part: feature:5163129-5163210:1:exon
so has part: feature:5201746-5201834:1:exon
so has part: feature:5203930-5203965:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5154189-5154416:1:exon

position:5154416:1
position: 5154416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5163129-5163210:1:exon

position:5163129:1
position: 5163129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5163210:1
position: 5163210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5201746-5201834:1:exon

position:5201746:1
position: 5201746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5201834:1
position: 5201834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5203930-5203965:1:exon

position:5203930:1
position: 5203930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105863645
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105863645
product: uncharacterized LOC105863645, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222919.1
SIO_010081: LOC105863645
subclass of: SO_0000673
so part of: LOC105863645
location: join(5154189..5154416,5163129..5163210,5179222..5179291)
location: region:5154189-5179291:1
so has part: feature:5154189-5154416:1:exon
so has part: feature:5163129-5163210:1:exon
so has part: feature:5179222-5179291:1:exon

position:5179291:1
position: 5179291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5154189-5154416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5163129-5163210:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5179222-5179291:1:exon

position:5179222:1
position: 5179222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF654
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: ZNF654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5159675..5244752)
location: region:5159675-5244752:-1
so has part: feature:5159675-5244752:-1:exon
subclass of: SO_0000010

105863643
type: Gene
SIO_000068: ncbigene

position:5159675:-1
position: 5159675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5244752:-1
position: 5244752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5159675-5244752:-1:exon

ZNF654
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF654
product: zinc finger protein 654, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012750982.2
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(5159675..5162572,5163159..5165505,5169099..5169240,5179232..5179371,5179878..5180080,5184652..5184787,5198872..5198953,5217808..5217953,5244386..5244752))
location: region:5159675-5244752:-1
so has part: feature:5244386-5244752:-1:exon
so has part: feature:5217808-5217953:-1:exon
so has part: feature:5198872-5198953:-1:exon
so has part: feature:5184652-5184787:-1:exon
so has part: feature:5179878-5180080:-1:exon
so has part: feature:5179232-5179371:-1:exon
so has part: feature:5169099-5169240:-1:exon
so has part: feature:5163159-5165505:-1:exon
so has part: feature:5159675-5162572:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5244386-5244752:-1:exon

position:5244386:-1
position: 5244386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5217808-5217953:-1:exon

position:5217808:-1
position: 5217808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5217953:-1
position: 5217953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5198872-5198953:-1:exon

position:5198872:-1
position: 5198872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5198953:-1
position: 5198953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5184652-5184787:-1:exon

position:5184652:-1
position: 5184652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5184787:-1
position: 5184787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5179878-5180080:-1:exon

position:5179878:-1
position: 5179878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5180080:-1
position: 5180080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5179232-5179371:-1:exon

position:5179232:-1
position: 5179232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5179371:-1
position: 5179371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5169099-5169240:-1:exon

position:5169099:-1
position: 5169099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5169240:-1
position: 5169240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5163159-5165505:-1:exon

position:5163159:-1
position: 5163159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5165505:-1
position: 5165505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5159675-5162572:-1:exon

position:5162572:-1
position: 5162572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF654
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF654
product: zinc finger protein 654, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012750984.1
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(5159675..5162572,5163159..5165505,5169099..5169240,5179232..5179371,5179878..5180080,5184652..5184787,5198338..5198396,5198872..5198953,5217456..5217547,5217808..5217892))
location: region:5159675-5217892:-1
so has part: feature:5217808-5217892:-1:exon
so has part: feature:5217456-5217547:-1:exon
so has part: feature:5198872-5198953:-1:exon
so has part: feature:5198338-5198396:-1:exon
so has part: feature:5184652-5184787:-1:exon
so has part: feature:5179878-5180080:-1:exon
so has part: feature:5179232-5179371:-1:exon
so has part: feature:5169099-5169240:-1:exon
so has part: feature:5163159-5165505:-1:exon
so has part: feature:5159675-5162572:-1:exon

position:5217892:-1
position: 5217892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5217808-5217892:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5217456-5217547:-1:exon

position:5217456:-1
position: 5217456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5217547:-1
position: 5217547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5198872-5198953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5198338-5198396:-1:exon

position:5198338:-1
position: 5198338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5198396:-1
position: 5198396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5184652-5184787:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5179878-5180080:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5179232-5179371:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5169099-5169240:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5163159-5165505:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5159675-5162572:-1:exon

ZNF654
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF654
product: zinc finger protein 654, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284745.1
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(5159675..5162572,5163159..5165505,5169099..5169240,5179232..5179371,5179878..5180080,5184652..5184787,5198338..5198396,5198872..5198953,5217456..5217780))
location: region:5159675-5217780:-1
so has part: feature:5217456-5217780:-1:exon
so has part: feature:5198872-5198953:-1:exon
so has part: feature:5198338-5198396:-1:exon
so has part: feature:5184652-5184787:-1:exon
so has part: feature:5179878-5180080:-1:exon
so has part: feature:5179232-5179371:-1:exon
so has part: feature:5169099-5169240:-1:exon
so has part: feature:5163159-5165505:-1:exon
so has part: feature:5159675-5162572:-1:exon

position:5217780:-1
position: 5217780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5217456-5217780:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5198872-5198953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5198338-5198396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5184652-5184787:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5179878-5180080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5179232-5179371:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5169099-5169240:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5163159-5165505:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5159675-5162572:-1:exon

ZNF654
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZNF654
product: zinc finger protein 654, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012750983.2
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(5159675..5162572,5163159..5165505,5169099..5169240,5179232..5179371,5179878..5180080,5184652..5184787,5195652..5195779))
location: region:5159675-5195779:-1
so has part: feature:5195652-5195779:-1:exon
so has part: feature:5184652-5184787:-1:exon
so has part: feature:5179878-5180080:-1:exon
so has part: feature:5179232-5179371:-1:exon
so has part: feature:5169099-5169240:-1:exon
so has part: feature:5163159-5165505:-1:exon
so has part: feature:5159675-5162572:-1:exon

position:5195779:-1
position: 5195779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5195652-5195779:-1:exon

position:5195652:-1
position: 5195652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5184652-5184787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5179878-5180080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5179232-5179371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5169099-5169240:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5163159-5165505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5159675-5162572:-1:exon

ZNF654
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 654 isoform X1
translation: MAEEESDQEAERLGEELVAIVESPLGPVGLSSEDDGRSGAGGGSCGGCGGGVGISSRDYCRRFCQVVEDYAGRWQVPLPQLQVLQTALCCFTSASASFPDECEHVQYVLSSLAVSFFELLLFFGRDEFYEEPLKDILGSFQECQNHLRRYGNVNLELVTRIIRDGGPWEDPVLQAVLKAQPASQEIVNKYLSSENPLFFELRARYLIACERIPEAMALIKSCINHPEISKDLYFHQAFFTCLFMSPVEDQLFREHLLKTDCKSGIDIICNTEKEGKTMLALQLCESFLIPQLQNGDMYCIWELIFIWSKLQLKSNPSKQVFVDQCYQLLRTATNVRVIFPFMKIIKDEVEEEGLQICVEICGCALQLDLHDDPQTKCLIYKTIAHFLPNDLEILRICALSIFFLERSLEAYHTVEELYKRPDEEYNEGTSSVQNRVRFELLPILKKGLFFDPEFWNFVMIKKNCVALLSDKSAVRFLNESTLENSTDNLKKTMEQQGLDEGLDCLTDQSTGETDLDDVSGVQPKSHINTKKNLTAFNTSKVDHNVPRHRCMLCNKEFLGGHIVRHAQAHQKKGSFSCVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQQDDQEITILEEIDCSNSSISFENGNSDNQDLEVGTFTASSDGNKEVIPEHVAEFIEIPVSVPEDVIENIIENGSPDTSLNNVLKPLPECEDDYEEEEDEEGDYEDDDYDLNQETSVLHKINGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSETILWDVHSDSNPNHQEKDSSSNEKQTVNLPVSICKSRKDSTEPKTCIESMEKKTDSLVQNGNEHSDDTVSNISLIDQKMPDIEPNSENNYSSSDLVNGHSEMEQTPLVSSDPALKSDISRIRTENGSVLPNAVPQEHNTLPVSQAPSKPNLTSEPTSYGLILTKPYVRPLPPSYLDERYLSMPKRRKFLTDIVDACSDQDNIYKKPVKRLRCGKCLTTYCNAEALEAHLAQKKCQTLFGFESDDESA
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(5162565..5162572,5163159..5165505,5169099..5169240,5179232..5179371,5179878..5180080,5184652..5184787,5198872..5198953,5217808..5217953,5244386..5244580))
location: region:5162565-5244580:-1
so has part: feature:5244386-5244580:-1:exon
so has part: feature:5217808-5217953:-1:exon
so has part: feature:5198872-5198953:-1:exon
so has part: feature:5184652-5184787:-1:exon
so has part: feature:5179878-5180080:-1:exon
so has part: feature:5179232-5179371:-1:exon
so has part: feature:5169099-5169240:-1:exon
so has part: feature:5163159-5165505:-1:exon
so has part: feature:5162565-5162572:-1:exon

XP_012606436.1
type: Protein
SIO_000068: ncbiprotein

position:5162565:-1
position: 5162565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5244580:-1
position: 5244580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5244386-5244580:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5217808-5217953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5198872-5198953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5184652-5184787:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5179878-5180080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5179232-5179371:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5169099-5169240:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5163159-5165505:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5162565-5162572:-1:exon

ZNF654
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 654 isoform X3
translation: MTRFKSSSECQNHLRRYGNVNLELVTRIIRDGGPWEDPVLQAVLKAQPASQEIVNKYLSSENPLFFELRARYLIACERIPEAMALIKSCINHPEISKDLYFHQAFFTCLFMSPVEDQLFREHLLKTDCKSGIDIICNTEKEGKTMLALQLCESFLIPQLQNGDMYCIWELIFIWSKLQLKSNPSKQVFVDQCYQLLRTATNVRVIFPFMKIIKDEVEEEGLQICVEICGCALQLDLHDDPQTKCLIYKTIAHFLPNDLEILRICALSIFFLERSLEAYHTVEELYKRPDEEYNEGTSSVQNRVRFELLPILKKGLFFDPEFWNFVMIKKNCVALLSDKSAVRFLNESTLENSTDNLKKTMEQQGLDEGLDCLTDQSTGETDLDDVSGVQPKSHINTKKNLTAFNTSKVDHNVPRHRCMLCNKEFLGGHIVRHAQAHQKKGSFSCVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQQDDQEITILEEIDCSNSSISFENGNSDNQDLEVGTFTASSDGNKEVIPEHVAEFIEIPVSVPEDVIENIIENGSPDTSLNNVLKPLPECEDDYEEEEDEEGDYEDDDYDLNQETSVLHKINGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSETILWDVHSDSNPNHQEKDSSSNEKQTVNLPVSICKSRKDSTEPKTCIESMEKKTDSLVQNGNEHSDDTVSNISLIDQKMPDIEPNSENNYSSSDLVNGHSEMEQTPLVSSDPALKSDISRIRTENGSVLPNAVPQEHNTLPVSQAPSKPNLTSEPTSYGLILTKPYVRPLPPSYLDERYLSMPKRRKFLTDIVDACSDQDNIYKKPVKRLRCGKCLTTYCNAEALEAHLAQKKCQTLFGFESDDESA
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(5162565..5162572,5163159..5165505,5169099..5169240,5179232..5179371,5179878..5180080,5184652..5184787,5198338..5198361))
location: region:5162565-5198361:-1
so has part: feature:5198338-5198361:-1:exon
so has part: feature:5184652-5184787:-1:exon
so has part: feature:5179878-5180080:-1:exon
so has part: feature:5179232-5179371:-1:exon
so has part: feature:5169099-5169240:-1:exon
so has part: feature:5163159-5165505:-1:exon
so has part: feature:5162565-5162572:-1:exon

XP_020140334.1
type: Protein
SIO_000068: ncbiprotein

position:5198361:-1
position: 5198361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5198338-5198361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5184652-5184787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5179878-5180080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5179232-5179371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5169099-5169240:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5163159-5165505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5162565-5162572:-1:exon

ZNF654
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 654 isoform X3
translation: MTRFKSSSECQNHLRRYGNVNLELVTRIIRDGGPWEDPVLQAVLKAQPASQEIVNKYLSSENPLFFELRARYLIACERIPEAMALIKSCINHPEISKDLYFHQAFFTCLFMSPVEDQLFREHLLKTDCKSGIDIICNTEKEGKTMLALQLCESFLIPQLQNGDMYCIWELIFIWSKLQLKSNPSKQVFVDQCYQLLRTATNVRVIFPFMKIIKDEVEEEGLQICVEICGCALQLDLHDDPQTKCLIYKTIAHFLPNDLEILRICALSIFFLERSLEAYHTVEELYKRPDEEYNEGTSSVQNRVRFELLPILKKGLFFDPEFWNFVMIKKNCVALLSDKSAVRFLNESTLENSTDNLKKTMEQQGLDEGLDCLTDQSTGETDLDDVSGVQPKSHINTKKNLTAFNTSKVDHNVPRHRCMLCNKEFLGGHIVRHAQAHQKKGSFSCVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQQDDQEITILEEIDCSNSSISFENGNSDNQDLEVGTFTASSDGNKEVIPEHVAEFIEIPVSVPEDVIENIIENGSPDTSLNNVLKPLPECEDDYEEEEDEEGDYEDDDYDLNQETSVLHKINGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSETILWDVHSDSNPNHQEKDSSSNEKQTVNLPVSICKSRKDSTEPKTCIESMEKKTDSLVQNGNEHSDDTVSNISLIDQKMPDIEPNSENNYSSSDLVNGHSEMEQTPLVSSDPALKSDISRIRTENGSVLPNAVPQEHNTLPVSQAPSKPNLTSEPTSYGLILTKPYVRPLPPSYLDERYLSMPKRRKFLTDIVDACSDQDNIYKKPVKRLRCGKCLTTYCNAEALEAHLAQKKCQTLFGFESDDESA
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(5162565..5162572,5163159..5165505,5169099..5169240,5179232..5179371,5179878..5180080,5184652..5184787,5198338..5198361))
location: region:5162565-5198361:-1
so has part: feature:5198338-5198361:-1:exon
so has part: feature:5184652-5184787:-1:exon
so has part: feature:5179878-5180080:-1:exon
so has part: feature:5179232-5179371:-1:exon
so has part: feature:5169099-5169240:-1:exon
so has part: feature:5163159-5165505:-1:exon
so has part: feature:5162565-5162572:-1:exon

XP_012606438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5198338-5198361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5184652-5184787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5179878-5180080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5179232-5179371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5169099-5169240:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5163159-5165505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5162565-5162572:-1:exon

ZNF654
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZNF654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 654 isoform X2
translation: MGCIALLSILSIERIGSMIQTKCSLLQYPEECQNHLRRYGNVNLELVTRIIRDGGPWEDPVLQAVLKAQPASQEIVNKYLSSENPLFFELRARYLIACERIPEAMALIKSCINHPEISKDLYFHQAFFTCLFMSPVEDQLFREHLLKTDCKSGIDIICNTEKEGKTMLALQLCESFLIPQLQNGDMYCIWELIFIWSKLQLKSNPSKQVFVDQCYQLLRTATNVRVIFPFMKIIKDEVEEEGLQICVEICGCALQLDLHDDPQTKCLIYKTIAHFLPNDLEILRICALSIFFLERSLEAYHTVEELYKRPDEEYNEGTSSVQNRVRFELLPILKKGLFFDPEFWNFVMIKKNCVALLSDKSAVRFLNESTLENSTDNLKKTMEQQGLDEGLDCLTDQSTGETDLDDVSGVQPKSHINTKKNLTAFNTSKVDHNVPRHRCMLCNKEFLGGHIVRHAQAHQKKGSFSCVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQQDDQEITILEEIDCSNSSISFENGNSDNQDLEVGTFTASSDGNKEVIPEHVAEFIEIPVSVPEDVIENIIENGSPDTSLNNVLKPLPECEDDYEEEEDEEGDYEDDDYDLNQETSVLHKINGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSETILWDVHSDSNPNHQEKDSSSNEKQTVNLPVSICKSRKDSTEPKTCIESMEKKTDSLVQNGNEHSDDTVSNISLIDQKMPDIEPNSENNYSSSDLVNGHSEMEQTPLVSSDPALKSDISRIRTENGSVLPNAVPQEHNTLPVSQAPSKPNLTSEPTSYGLILTKPYVRPLPPSYLDERYLSMPKRRKFLTDIVDACSDQDNIYKKPVKRLRCGKCLTTYCNAEALEAHLAQKKCQTLFGFESDDESA
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(5162565..5162572,5163159..5165505,5169099..5169240,5179232..5179371,5179878..5180080,5184652..5184787,5195652..5195741))
location: region:5162565-5195741:-1
so has part: feature:5195652-5195741:-1:exon
so has part: feature:5184652-5184787:-1:exon
so has part: feature:5179878-5180080:-1:exon
so has part: feature:5179232-5179371:-1:exon
so has part: feature:5169099-5169240:-1:exon
so has part: feature:5163159-5165505:-1:exon
so has part: feature:5162565-5162572:-1:exon

XP_012606437.1
type: Protein
SIO_000068: ncbiprotein

position:5195741:-1
position: 5195741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5195652-5195741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5184652-5184787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5179878-5180080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5179232-5179371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5169099-5169240:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5163159-5165505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5162565-5162572:-1:exon

CGGBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: CGGBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5244852..5252031
location: region:5244852-5252031:1
so has part: feature:5244852-5252031:1:exon
subclass of: SO_0000010

105863644
type: Gene
SIO_000068: ncbigene

position:5244852:1
position: 5244852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5252031:1
position: 5252031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5244852-5252031:1:exon

CGGBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CGGBP1
product: CGG triplet repeat binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 325 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012750985.2
SIO_010081: CGGBP1
subclass of: SO_0000673
so part of: CGGBP1
location: join(5244852..5245082,5245674..5245875,5247872..5252031)
location: region:5244852-5252031:1
so has part: feature:5244852-5245082:1:exon
so has part: feature:5245674-5245875:1:exon
so has part: feature:5247872-5252031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5244852-5245082:1:exon

position:5245082:1
position: 5245082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5245674-5245875:1:exon

position:5245674:1
position: 5245674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5245875:1
position: 5245875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5247872-5252031:1:exon

position:5247872:1
position: 5247872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CGGBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CGGBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CGG triplet repeat-binding protein 1
translation: MERFVVTAPPARNRSKTALYVTPLDRVSEFGGELHEDGGKLFCTSCNVVLNHVRKSAISDHLKSKTHTKRKAEFEEQNVRKKQRPLTASLQCNSTAQTEKVSVIQDFVKMCLEANIPLEKADHPAVRAFLSRHVKNGGSIPKSDQLRRAYLPDGYENENQLLNSQDC
SIO_010081: CGGBP1
subclass of: SO_0000673
so part of: CGGBP1
location: 5247891..5248394
location: region:5247891-5248394:1
so has part: feature:5247891-5248394:1:exon

XP_012606439.1
type: Protein
SIO_000068: ncbiprotein

position:5247891:1
position: 5247891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5248394:1
position: 5248394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5247891-5248394:1:exon

HTR1F
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: HTR1F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5329086..5486846)
location: region:5329086-5486846:-1
so has part: feature:5329086-5486846:-1:exon
subclass of: SO_0000010

105859314
type: Gene
SIO_000068: ncbigene

position:5329086:-1
position: 5329086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5486846:-1
position: 5486846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5329086-5486846:-1:exon

HTR1F
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: HTR1F
product: 5-hydroxytryptamine receptor 1F, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012743026.1
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(join(5329086..5338815,5486668..5486846))
location: region:5329086-5486846:-1
so has part: feature:5486668-5486846:-1:exon
so has part: feature:5329086-5338815:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5486668-5486846:-1:exon

position:5486668:-1
position: 5486668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5329086-5338815:-1:exon

position:5338815:-1
position: 5338815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HTR1F
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: HTR1F
product: 5-hydroxytryptamine receptor 1F, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012743024.1
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(join(5329086..5338815,5453503..5453553,5458870..5458985,5465906..5466083))
location: region:5329086-5466083:-1
so has part: feature:5465906-5466083:-1:exon
so has part: feature:5458870-5458985:-1:exon
so has part: feature:5453503-5453553:-1:exon
so has part: feature:5329086-5338815:-1:exon

position:5466083:-1
position: 5466083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5465906-5466083:-1:exon

position:5465906:-1
position: 5465906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5458870-5458985:-1:exon

position:5458870:-1
position: 5458870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5458985:-1
position: 5458985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5453503-5453553:-1:exon

position:5453503:-1
position: 5453503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5453553:-1
position: 5453553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5329086-5338815:-1:exon

HTR1F
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: HTR1F
product: 5-hydroxytryptamine receptor 1F, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012743025.1
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(join(5329086..5338815,5339571..5339613,5453503..5453553,5458870..5458985,5465906..5466083))
location: region:5329086-5466083:-1
so has part: feature:5465906-5466083:-1:exon
so has part: feature:5458870-5458985:-1:exon
so has part: feature:5453503-5453553:-1:exon
so has part: feature:5339571-5339613:-1:exon
so has part: feature:5329086-5338815:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5465906-5466083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5458870-5458985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5453503-5453553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5339571-5339613:-1:exon

position:5339571:-1
position: 5339571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5339613:-1
position: 5339613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5329086-5338815:-1:exon

HTR1F
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: HTR1F
product: 5-hydroxytryptamine receptor 1F, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012743023.1
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(join(5329086..5339613,5453503..5453553,5458870..5458985,5465906..5466083))
location: region:5329086-5466083:-1
so has part: feature:5465906-5466083:-1:exon
so has part: feature:5458870-5458985:-1:exon
so has part: feature:5453503-5453553:-1:exon
so has part: feature:5329086-5339613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5465906-5466083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5458870-5458985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5453503-5453553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5329086-5339613:-1:exon

HTR1F
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: HTR1F
product: 5-hydroxytryptamine receptor 1F, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012743020.1
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(join(5329086..5339855,5453503..5453553,5458870..5458985,5465906..5466083))
location: region:5329086-5466083:-1
so has part: feature:5465906-5466083:-1:exon
so has part: feature:5458870-5458985:-1:exon
so has part: feature:5453503-5453553:-1:exon
so has part: feature:5329086-5339855:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5465906-5466083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5458870-5458985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5453503-5453553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5329086-5339855:-1:exon

position:5339855:-1
position: 5339855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HTR1F
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: HTR1F
product: 5-hydroxytryptamine receptor 1F, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012743022.1
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(join(5329086..5339613,5410220..5410296,5413924..5414376,5448994..5449068,5453503..5453553,5458870..5458985,5465732..5465780,5465906..5465915))
location: region:5329086-5465915:-1
so has part: feature:5465906-5465915:-1:exon
so has part: feature:5465732-5465780:-1:exon
so has part: feature:5458870-5458985:-1:exon
so has part: feature:5453503-5453553:-1:exon
so has part: feature:5448994-5449068:-1:exon
so has part: feature:5413924-5414376:-1:exon
so has part: feature:5410220-5410296:-1:exon
so has part: feature:5329086-5339613:-1:exon

position:5465915:-1
position: 5465915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5465906-5465915:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5465732-5465780:-1:exon

position:5465732:-1
position: 5465732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5465780:-1
position: 5465780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5458870-5458985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5453503-5453553:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5448994-5449068:-1:exon

position:5448994:-1
position: 5448994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5449068:-1
position: 5449068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5413924-5414376:-1:exon

position:5413924:-1
position: 5413924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5414376:-1
position: 5414376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5410220-5410296:-1:exon

position:5410220:-1
position: 5410220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5410296:-1
position: 5410296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5329086-5339613:-1:exon

HTR1F
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: HTR1F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 1F
translation: MEFLNSSDQNLTSEELLNKMLPKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITVVWIISVFISMPPLFWRHQGTSQDDECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEELNGQVLLESGEKSTRLVSTSYVLEKSLSDPSTDIDRIHNTVKSPRSEFKHEKSWRRQRISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVCEKCKISEEMSNFLTWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(5337673..5338773)
location: region:5337673-5338773:-1
so has part: feature:5337673-5338773:-1:exon

XP_012598474.1
type: Protein
SIO_000068: ncbiprotein

position:5337673:-1
position: 5337673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5338773:-1
position: 5338773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5337673-5338773:-1:exon

HTR1F
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: HTR1F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 1F
translation: MEFLNSSDQNLTSEELLNKMLPKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITVVWIISVFISMPPLFWRHQGTSQDDECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEELNGQVLLESGEKSTRLVSTSYVLEKSLSDPSTDIDRIHNTVKSPRSEFKHEKSWRRQRISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVCEKCKISEEMSNFLTWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(5337673..5338773)
location: region:5337673-5338773:-1
so has part: feature:5337673-5338773:-1:exon

XP_012598476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5337673-5338773:-1:exon

HTR1F
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: HTR1F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 1F
translation: MEFLNSSDQNLTSEELLNKMLPKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITVVWIISVFISMPPLFWRHQGTSQDDECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEELNGQVLLESGEKSTRLVSTSYVLEKSLSDPSTDIDRIHNTVKSPRSEFKHEKSWRRQRISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVCEKCKISEEMSNFLTWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(5337673..5338773)
location: region:5337673-5338773:-1
so has part: feature:5337673-5338773:-1:exon

XP_012598477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5337673-5338773:-1:exon

HTR1F
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: HTR1F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 1F
translation: MEFLNSSDQNLTSEELLNKMLPKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITVVWIISVFISMPPLFWRHQGTSQDDECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEELNGQVLLESGEKSTRLVSTSYVLEKSLSDPSTDIDRIHNTVKSPRSEFKHEKSWRRQRISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVCEKCKISEEMSNFLTWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(5337673..5338773)
location: region:5337673-5338773:-1
so has part: feature:5337673-5338773:-1:exon

XP_012598478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5337673-5338773:-1:exon

HTR1F
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: HTR1F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 1F
translation: MEFLNSSDQNLTSEELLNKMLPKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITVVWIISVFISMPPLFWRHQGTSQDDECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEELNGQVLLESGEKSTRLVSTSYVLEKSLSDPSTDIDRIHNTVKSPRSEFKHEKSWRRQRISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVCEKCKISEEMSNFLTWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(5337673..5338773)
location: region:5337673-5338773:-1
so has part: feature:5337673-5338773:-1:exon

XP_012598479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5337673-5338773:-1:exon

HTR1F
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: HTR1F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 1F
translation: MEFLNSSDQNLTSEELLNKMLPKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITVVWIISVFISMPPLFWRHQGTSQDDECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEELNGQVLLESGEKSTRLVSTSYVLEKSLSDPSTDIDRIHNTVKSPRSEFKHEKSWRRQRISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVCEKCKISEEMSNFLTWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(5337673..5338773)
location: region:5337673-5338773:-1
so has part: feature:5337673-5338773:-1:exon

XP_012598480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5337673-5338773:-1:exon

HTR1F
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: HTR1F
product: 5-hydroxytryptamine receptor 1F, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001148522.1
SIO_010081: HTR1F
so part of: HTR1F
location: complement(join(5403110..5403229,5410220..5410296,5413924..5414335,5453503..5453553,5458870..5458985,5465906..5466083))
location: region:5403110-5466083:-1
so has part: feature:5465906-5466083:-1:exon
so has part: feature:5458870-5458985:-1:exon
so has part: feature:5453503-5453553:-1:exon
so has part: feature:5413924-5414335:-1:exon
so has part: feature:5410220-5410296:-1:exon
so has part: feature:5403110-5403229:-1:exon

position:5403110:-1
position: 5403110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5465906-5466083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5458870-5458985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5453503-5453553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5413924-5414335:-1:exon

position:5414335:-1
position: 5414335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5410220-5410296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5403110-5403229:-1:exon

position:5403229:-1
position: 5403229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HTR1F
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: HTR1F
product: 5-hydroxytryptamine receptor 1F, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001148521.1
SIO_010081: HTR1F
so part of: HTR1F
location: complement(join(5409939..5410296,5413924..5413953,5453503..5453553,5458870..5458985,5465906..5466083))
location: region:5409939-5466083:-1
so has part: feature:5465906-5466083:-1:exon
so has part: feature:5458870-5458985:-1:exon
so has part: feature:5453503-5453553:-1:exon
so has part: feature:5413924-5413953:-1:exon
so has part: feature:5409939-5410296:-1:exon

position:5409939:-1
position: 5409939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5465906-5466083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5458870-5458985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5453503-5453553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5413924-5413953:-1:exon

position:5413953:-1
position: 5413953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5409939-5410296:-1:exon

LOC105859313
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105859313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<5500874..5502480)
location: region:5500874-5502480:-1
so has part: feature:5500874-5502480:-1:exon
subclass of: SO_0000010

105859313
type: Gene
SIO_000068: ncbigene

position:5500874:-1
position: 5500874
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:5502480:-1
position: 5502480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5500874-5502480:-1:exon

LOC105859313
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105859313
product: TNF receptor-associated factor 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012743019.2
SIO_010081: LOC105859313
subclass of: SO_0000673
so part of: LOC105859313
location: complement(join(<5500874..5501368,5501444..5502480))
location: region:5500874-5502480:-1
so has part: feature:5501444-5502480:-1:exon
so has part: feature:5500874-5501368:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5501444-5502480:-1:exon

position:5501444:-1
position: 5501444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5500874-5501368:-1:exon

position:5501368:-1
position: 5501368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105859313
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105859313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TNF receptor-associated factor 3-like
translation: MESSKKMDSAGPLQTNPPLKLHPDRSAGTSVFVPEQGGYKEKFVKAVEDKYKCEKCRLVLCNPKQTECGHRFCETCMAALLSSSSPKCTACQESIIKDKVFKDNCCKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCQFEELPCARADCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMITLQKHEDTECPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSSSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQ
SIO_010081: LOC105859313
subclass of: SO_0000673
so part of: LOC105859313
location: complement(join(<5500874..5501368,5501444..5502094))
location: region:5500874-5502094:-1
so has part: feature:5501444-5502094:-1:exon
so has part: feature:5500874-5501368:-1:exon

XP_012598473.2
type: Protein
SIO_000068: ncbiprotein

position:5502094:-1
position: 5502094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5501444-5502094:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5500874-5501368:-1:exon

POU1F1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: POU1F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5855688..5870245
location: region:5855688-5870245:1
so has part: feature:5855688-5870245:1:exon
subclass of: SO_0000010

105859316
type: Gene
SIO_000068: ncbigene

position:5855688:1
position: 5855688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5870245:1
position: 5870245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5855688-5870245:1:exon

POU1F1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: POU1F1
product: POU class 1 homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012743028.2
SIO_010081: POU1F1
subclass of: SO_0000673
so part of: POU1F1
location: join(5855688..5855915,5858728..5858877,5865796..5866020,5868051..5868215,5868955..5869015,5869881..5870245)
location: region:5855688-5870245:1
so has part: feature:5855688-5855915:1:exon
so has part: feature:5858728-5858877:1:exon
so has part: feature:5865796-5866020:1:exon
so has part: feature:5868051-5868215:1:exon
so has part: feature:5868955-5869015:1:exon
so has part: feature:5869881-5870245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5855688-5855915:1:exon

position:5855915:1
position: 5855915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5858728-5858877:1:exon

position:5858728:1
position: 5858728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5858877:1
position: 5858877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5865796-5866020:1:exon

position:5865796:1
position: 5865796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5866020:1
position: 5866020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5868051-5868215:1:exon

position:5868051:1
position: 5868051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5868215:1
position: 5868215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5868955-5869015:1:exon

position:5868955:1
position: 5868955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5869015:1
position: 5869015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5869881-5870245:1:exon

position:5869881:1
position: 5869881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POU1F1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: POU1F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pituitary-specific positive transcription factor 1
translation: MSCQSFTSADTFIPLNSDASATLPLIMHHSAAECLPVSNHATNVMSAVLPILSLIQTPKCLRTHSSVKTLGNTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHTLSHGFPPIHQPLLAEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEKVGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVKTSLNQSLFSISKEHLECR
SIO_010081: POU1F1
subclass of: SO_0000673
so part of: POU1F1
location: join(5855774..5855915,5858728..5858877,5865796..5866020,5868051..5868215,5868955..5869015,5869881..5870091)
location: region:5855774-5870091:1
so has part: feature:5855774-5855915:1:exon
so has part: feature:5858728-5858877:1:exon
so has part: feature:5865796-5866020:1:exon
so has part: feature:5868051-5868215:1:exon
so has part: feature:5868955-5869015:1:exon
so has part: feature:5869881-5870091:1:exon

XP_012598482.1
type: Protein
SIO_000068: ncbiprotein

position:5855774:1
position: 5855774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5870091:1
position: 5870091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5855774-5855915:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5858728-5858877:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5865796-5866020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5868051-5868215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5868955-5869015:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5869881-5870091:1:exon

CHMP2B
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: CHMP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5875030..5900004)
location: region:5875030-5900004:-1
so has part: feature:5875030-5900004:-1:exon
subclass of: SO_0000010

105859315
type: Gene
SIO_000068: ncbigene

position:5875030:-1
position: 5875030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5900004:-1
position: 5900004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5875030-5900004:-1:exon

CHMP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CHMP2B
product: charged multivesicular body protein 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 246 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012743027.1
SIO_010081: CHMP2B
subclass of: SO_0000673
so part of: CHMP2B
location: complement(join(5875030..5875532,5875725..5875831,5879708..5879810,5882364..5882558,5888349..5888440,5899713..5900004))
location: region:5875030-5900004:-1
so has part: feature:5899713-5900004:-1:exon
so has part: feature:5888349-5888440:-1:exon
so has part: feature:5882364-5882558:-1:exon
so has part: feature:5879708-5879810:-1:exon
so has part: feature:5875725-5875831:-1:exon
so has part: feature:5875030-5875532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5899713-5900004:-1:exon

position:5899713:-1
position: 5899713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5888349-5888440:-1:exon

position:5888349:-1
position: 5888349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5888440:-1
position: 5888440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5882364-5882558:-1:exon

position:5882364:-1
position: 5882364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5882558:-1
position: 5882558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5879708-5879810:-1:exon

position:5879708:-1
position: 5879708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5879810:-1
position: 5879810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5875725-5875831:-1:exon

position:5875725:-1
position: 5875725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5875831:-1
position: 5875831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5875030-5875532:-1:exon

position:5875532:-1
position: 5875532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHMP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CHMP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 2b
translation: MASLFKKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFEGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLLPSASTSKATISDEEIERQLKALGVD
SIO_010081: CHMP2B
subclass of: SO_0000673
so part of: CHMP2B
location: complement(join(5875419..5875532,5875725..5875831,5879708..5879810,5882364..5882558,5888349..5888440,5899713..5899746))
location: region:5875419-5899746:-1
so has part: feature:5899713-5899746:-1:exon
so has part: feature:5888349-5888440:-1:exon
so has part: feature:5882364-5882558:-1:exon
so has part: feature:5879708-5879810:-1:exon
so has part: feature:5875725-5875831:-1:exon
so has part: feature:5875419-5875532:-1:exon

XP_012598481.1
type: Protein
SIO_000068: ncbiprotein

position:5875419:-1
position: 5875419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5899746:-1
position: 5899746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5899713-5899746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5888349-5888440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5882364-5882558:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5879708-5879810:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5875725-5875831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5875419-5875532:-1:exon

LOC109730182
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6105167..6114322)
location: region:6105167-6114322:-1
so has part: feature:6105167-6114322:-1:exon
subclass of: SO_0000011

109730182
type: Gene
SIO_000068: ncbigene

position:6105167:-1
position: 6105167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6114322:-1
position: 6114322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6105167-6114322:-1:exon

LOC109730182
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC109730182
product: uncharacterized LOC109730182
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222908.1
SIO_010081: LOC109730182
subclass of: SO_0000673
so part of: LOC109730182
location: complement(join(6105167..6105298,6108523..6108652,6114233..6114322))
location: region:6105167-6114322:-1
so has part: feature:6114233-6114322:-1:exon
so has part: feature:6108523-6108652:-1:exon
so has part: feature:6105167-6105298:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6114233-6114322:-1:exon

position:6114233:-1
position: 6114233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6108523-6108652:-1:exon

position:6108523:-1
position: 6108523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6108652:-1
position: 6108652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6105167-6105298:-1:exon

position:6105298:-1
position: 6105298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VGLL3
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6113312..6294809
location: region:6113312-6294809:1
so has part: feature:6113312-6294809:1:exon
subclass of: SO_0000010

105859317
type: Gene
SIO_000068: ncbigene

position:6113312:1
position: 6113312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6294809:1
position: 6294809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6113312-6294809:1:exon

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: VGLL3
product: vestigial like family member 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012743033.2
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6113312..6114024,6125490..6125772,6140599..6141126,6179635..6179671,6199348..6199450,6200129..6203282)
location: region:6113312-6203282:1
so has part: feature:6113312-6114024:1:exon
so has part: feature:6125490-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199450:1:exon
so has part: feature:6200129-6203282:1:exon

position:6203282:1
position: 6203282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6113312-6114024:1:exon

position:6114024:1
position: 6114024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6125490-6125772:1:exon

position:6125490:1
position: 6125490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6125772:1
position: 6125772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

position:6140599:1
position: 6140599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6141126:1
position: 6141126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

position:6179635:1
position: 6179635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6179671:1
position: 6179671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199450:1:exon

position:6199348:1
position: 6199348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6199450:1
position: 6199450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6200129-6203282:1:exon

position:6200129:1
position: 6200129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: VGLL3
product: vestigial like family member 3, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012743036.2
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6113312..6114024,6125655..6125772,6140599..6141126,6179635..6179671,6199348..6199450,6200129..6203282)
location: region:6113312-6203282:1
so has part: feature:6113312-6114024:1:exon
so has part: feature:6125655-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199450:1:exon
so has part: feature:6200129-6203282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6113312-6114024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125655-6125772:1:exon

position:6125655:1
position: 6125655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6200129-6203282:1:exon

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: VGLL3
product: vestigial like family member 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012743032.2
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6113313..6114024,6125487..6125772,6140599..6141126,6179635..6179671,6199348..6199450,6200129..6203282)
location: region:6113313-6203282:1
so has part: feature:6113313-6114024:1:exon
so has part: feature:6125487-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199450:1:exon
so has part: feature:6200129-6203282:1:exon

position:6113313:1
position: 6113313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6113313-6114024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125487-6125772:1:exon

position:6125487:1
position: 6125487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6200129-6203282:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X4
translation: MSCAAVMYHPQPYGASQYLPNPVAAATCPTACYHPAPQPGQQKKLAVYSKMQDSLEVTLPSKQEEEEEEEDEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVDEHFSRALGQVSTLHPESTISKSKMGLTPLWRDSSALSSQRSSFPTSFWTSSYQPPPAPCLGGVHPDFQVTAPPGTFSAADPSPWPGHGLHQTGPAPPPPSSESWRYPLASQVSPSYSHMHDVYMRHHHPHAHMHHRHHHHHHHPPAGSALDPSYGSLLMPSVCTARIPAPQCDITKTDPTTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKSKESPWSRYCLLSTDPLPDLPVFHTASEED
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6113899..6114024,6125487..6125772,6140599..6141126,6179635..6179671,6199348..6199423)
location: region:6113899-6199423:1
so has part: feature:6113899-6114024:1:exon
so has part: feature:6125487-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199423:1:exon

XP_012598486.1
type: Protein
SIO_000068: ncbiprotein

position:6113899:1
position: 6113899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6199423:1
position: 6199423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6113899-6114024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125487-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199423:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X5
translation: MSCAAVMYHPQPYGASQYLPNPVAAATCPTACYHPAPQPGQQKLAVYSKMQDSLEVTLPSKQEEEEEEEDEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVDEHFSRALGQVSTLHPESTISKSKMGLTPLWRDSSALSSQRSSFPTSFWTSSYQPPPAPCLGGVHPDFQVTAPPGTFSAADPSPWPGHGLHQTGPAPPPPSSESWRYPLASQVSPSYSHMHDVYMRHHHPHAHMHHRHHHHHHHPPAGSALDPSYGSLLMPSVCTARIPAPQCDITKTDPTTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKSKESPWSRYCLLSTDPLPDLPVFHTASEED
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6113899..6114024,6125490..6125772,6140599..6141126,6179635..6179671,6199348..6199423)
location: region:6113899-6199423:1
so has part: feature:6113899-6114024:1:exon
so has part: feature:6125490-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199423:1:exon

XP_012598487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6113899-6114024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125490-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199423:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X8
translation: MSCAAVMYHPQPYGASQYLPNPVAAATCPTACYHPAPQPGQQGDIGSVVDEHFSRALGQVSTLHPESTISKSKMGLTPLWRDSSALSSQRSSFPTSFWTSSYQPPPAPCLGGVHPDFQVTAPPGTFSAADPSPWPGHGLHQTGPAPPPPSSESWRYPLASQVSPSYSHMHDVYMRHHHPHAHMHHRHHHHHHHPPAGSALDPSYGSLLMPSVCTARIPAPQCDITKTDPTTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKSKESPWSRYCLLSTDPLPDLPVFHTASEED
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6113899..6114024,6125655..6125772,6140599..6141126,6179635..6179671,6199348..6199423)
location: region:6113899-6199423:1
so has part: feature:6113899-6114024:1:exon
so has part: feature:6125655-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199423:1:exon

XP_012598490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6113899-6114024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125655-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199423:1:exon

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: VGLL3
product: vestigial like family member 3, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012743035.2
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6114249..6114351,6125487..6125772,6140599..6141126,6179635..6179671,6199348..6199450,6200129..6203282)
location: region:6114249-6203282:1
so has part: feature:6114249-6114351:1:exon
so has part: feature:6125487-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199450:1:exon
so has part: feature:6200129-6203282:1:exon

position:6114249:1
position: 6114249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6114249-6114351:1:exon

position:6114351:1
position: 6114351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6125487-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6200129-6203282:1:exon

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: VGLL3
product: vestigial like family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284737.1
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6114360..6114689,6125487..6125772,6140599..6141126,6179635..6179671,6199348..6199450,6294741..6294809)
location: region:6114360-6294809:1
so has part: feature:6114360-6114689:1:exon
so has part: feature:6125487-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199450:1:exon
so has part: feature:6294741-6294809:1:exon

position:6114360:1
position: 6114360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6114360-6114689:1:exon

position:6114689:1
position: 6114689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6125487-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6294741-6294809:1:exon

position:6294741:1
position: 6294741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: VGLL3
product: vestigial like family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284735.1
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6114360..6114689,6125487..6125772,6140599..6141126,6179635..6179671,6199348..6199450,6200129..6203282)
location: region:6114360-6203282:1
so has part: feature:6114360-6114689:1:exon
so has part: feature:6125487-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199450:1:exon
so has part: feature:6200129-6203282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6114360-6114689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125487-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6200129-6203282:1:exon

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: VGLL3
product: vestigial like family member 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012743030.2
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6114360..6114689,6125490..6125772,6140599..6141126,6179635..6179671,6199348..6199450,6200129..6203282)
location: region:6114360-6203282:1
so has part: feature:6114360-6114689:1:exon
so has part: feature:6125490-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199450:1:exon
so has part: feature:6200129-6203282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6114360-6114689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125490-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6200129-6203282:1:exon

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: VGLL3
product: vestigial like family member 3, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012743034.2
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6114360..6114689,6125655..6125772,6140599..6141126,6179635..6179671,6199348..6199450,6200129..6203282)
location: region:6114360-6203282:1
so has part: feature:6114360-6114689:1:exon
so has part: feature:6125655-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199450:1:exon
so has part: feature:6200129-6203282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6114360-6114689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125655-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6200129-6203282:1:exon

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: VGLL3
product: vestigial like family member 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012743031.2
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6114360..6114647,6125487..6125772,6140599..6141126,6179635..6179671,6199348..6199450,6200129..6203282)
location: region:6114360-6203282:1
so has part: feature:6114360-6114647:1:exon
so has part: feature:6125487-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199450:1:exon
so has part: feature:6200129-6203282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6114360-6114647:1:exon

position:6114647:1
position: 6114647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6125487-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6200129-6203282:1:exon

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: VGLL3
product: vestigial like family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284736.1
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6114360..6114689,6125487..6125772,6140599..6141126,6179635..6179671,6199348..6200099)
location: region:6114360-6200099:1
so has part: feature:6114360-6114689:1:exon
so has part: feature:6125487-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6200099:1:exon

position:6200099:1
position: 6200099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6114360-6114689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125487-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6200099:1:exon

VGLL3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: VGLL3
product: vestigial like family member 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222907.1
SIO_010081: VGLL3
so part of: VGLL3
location: join(6114360..6114689,6125487..6125772,6140599..6141126,6171328..6171409,6179635..6185661)
location: region:6114360-6185661:1
so has part: feature:6114360-6114689:1:exon
so has part: feature:6125487-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6171328-6171409:1:exon
so has part: feature:6179635-6185661:1:exon

position:6185661:1
position: 6185661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6114360-6114689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125487-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6171328-6171409:1:exon

position:6171328:1
position: 6171328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6171409:1
position: 6171409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6179635-6185661:1:exon

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: VGLL3
product: vestigial like family member 3, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284738.1
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6114361..6114689,6122404..6122447,6125487..6125772,6140599..6141126,6179635..6179671,6199348..6199450,6200129..6203282)
location: region:6114361-6203282:1
so has part: feature:6114361-6114689:1:exon
so has part: feature:6122404-6122447:1:exon
so has part: feature:6125487-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199450:1:exon
so has part: feature:6200129-6203282:1:exon

position:6114361:1
position: 6114361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6114361-6114689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6122404-6122447:1:exon

position:6122404:1
position: 6122404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6122447:1
position: 6122447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6125487-6125772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6199348-6199450:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6200129-6203282:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X1
translation: MVKQWSSVTSVRRCFNFSIESFSLRLWLTGQRWIAMLFIHFPIPASTELVVVSVQSVDSTSPSLEKKLAVYSKMQDSLEVTLPSKQEEEEEEEDEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVDEHFSRALGQVSTLHPESTISKSKMGLTPLWRDSSALSSQRSSFPTSFWTSSYQPPPAPCLGGVHPDFQVTAPPGTFSAADPSPWPGHGLHQTGPAPPPPSSESWRYPLASQVSPSYSHMHDVYMRHHHPHAHMHHRHHHHHHHPPAGSALDPSYGSLLMPSVCTARIPAPQCDITKTDPTTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKSKESPWSRYCLLSTDPLPDLPVFHTASEED
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6114495..6114689,6125487..6125772,6140599..6141126,6179635..6179671,6199348..6199423)
location: region:6114495-6199423:1
so has part: feature:6114495-6114689:1:exon
so has part: feature:6125487-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199423:1:exon

XP_020140324.1
type: Protein
SIO_000068: ncbiprotein

position:6114495:1
position: 6114495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6114495-6114689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125487-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199423:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X1
translation: MVKQWSSVTSVRRCFNFSIESFSLRLWLTGQRWIAMLFIHFPIPASTELVVVSVQSVDSTSPSLEKKLAVYSKMQDSLEVTLPSKQEEEEEEEDEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVDEHFSRALGQVSTLHPESTISKSKMGLTPLWRDSSALSSQRSSFPTSFWTSSYQPPPAPCLGGVHPDFQVTAPPGTFSAADPSPWPGHGLHQTGPAPPPPSSESWRYPLASQVSPSYSHMHDVYMRHHHPHAHMHHRHHHHHHHPPAGSALDPSYGSLLMPSVCTARIPAPQCDITKTDPTTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKSKESPWSRYCLLSTDPLPDLPVFHTASEED
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6114495..6114689,6125487..6125772,6140599..6141126,6179635..6179671,6199348..6199423)
location: region:6114495-6199423:1
so has part: feature:6114495-6114689:1:exon
so has part: feature:6125487-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199423:1:exon

XP_020140325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6114495-6114689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125487-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199423:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X1
translation: MVKQWSSVTSVRRCFNFSIESFSLRLWLTGQRWIAMLFIHFPIPASTELVVVSVQSVDSTSPSLEKKLAVYSKMQDSLEVTLPSKQEEEEEEEDEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVDEHFSRALGQVSTLHPESTISKSKMGLTPLWRDSSALSSQRSSFPTSFWTSSYQPPPAPCLGGVHPDFQVTAPPGTFSAADPSPWPGHGLHQTGPAPPPPSSESWRYPLASQVSPSYSHMHDVYMRHHHPHAHMHHRHHHHHHHPPAGSALDPSYGSLLMPSVCTARIPAPQCDITKTDPTTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKSKESPWSRYCLLSTDPLPDLPVFHTASEED
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6114495..6114689,6125487..6125772,6140599..6141126,6179635..6179671,6199348..6199423)
location: region:6114495-6199423:1
so has part: feature:6114495-6114689:1:exon
so has part: feature:6125487-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199423:1:exon

XP_020140326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6114495-6114689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125487-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199423:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X2
translation: MVKQWSSVTSVRRCFNFSIESFSLRLWLTGQRWIAMLFIHFPIPASTELVVVSVQSVDSTSPSLEKLAVYSKMQDSLEVTLPSKQEEEEEEEDEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVDEHFSRALGQVSTLHPESTISKSKMGLTPLWRDSSALSSQRSSFPTSFWTSSYQPPPAPCLGGVHPDFQVTAPPGTFSAADPSPWPGHGLHQTGPAPPPPSSESWRYPLASQVSPSYSHMHDVYMRHHHPHAHMHHRHHHHHHHPPAGSALDPSYGSLLMPSVCTARIPAPQCDITKTDPTTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKSKESPWSRYCLLSTDPLPDLPVFHTASEED
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6114495..6114689,6125490..6125772,6140599..6141126,6179635..6179671,6199348..6199423)
location: region:6114495-6199423:1
so has part: feature:6114495-6114689:1:exon
so has part: feature:6125490-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199423:1:exon

XP_012598484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6114495-6114689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125490-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199423:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X6
translation: MVKQWSSVTSVRRCFNFSIESFSLRLWLTGQRWIAMLFIHFPIPASTELVVVSVQSVDSTSPSLEGDIGSVVDEHFSRALGQVSTLHPESTISKSKMGLTPLWRDSSALSSQRSSFPTSFWTSSYQPPPAPCLGGVHPDFQVTAPPGTFSAADPSPWPGHGLHQTGPAPPPPSSESWRYPLASQVSPSYSHMHDVYMRHHHPHAHMHHRHHHHHHHPPAGSALDPSYGSLLMPSVCTARIPAPQCDITKTDPTTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKSKESPWSRYCLLSTDPLPDLPVFHTASEED
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6114495..6114689,6125655..6125772,6140599..6141126,6179635..6179671,6199348..6199423)
location: region:6114495-6199423:1
so has part: feature:6114495-6114689:1:exon
so has part: feature:6125655-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199423:1:exon

XP_012598488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6114495-6114689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125655-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199423:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X3
translation: MVKQWSSVTSVRRCFNFSIESFSLRLWLTGQRWIAMLFIHFPIPASTELVVKKLAVYSKMQDSLEVTLPSKQEEEEEEEDEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVDEHFSRALGQVSTLHPESTISKSKMGLTPLWRDSSALSSQRSSFPTSFWTSSYQPPPAPCLGGVHPDFQVTAPPGTFSAADPSPWPGHGLHQTGPAPPPPSSESWRYPLASQVSPSYSHMHDVYMRHHHPHAHMHHRHHHHHHHPPAGSALDPSYGSLLMPSVCTARIPAPQCDITKTDPTTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKSKESPWSRYCLLSTDPLPDLPVFHTASEED
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6114495..6114647,6125487..6125772,6140599..6141126,6179635..6179671,6199348..6199423)
location: region:6114495-6199423:1
so has part: feature:6114495-6114647:1:exon
so has part: feature:6125487-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199423:1:exon

XP_012598485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6114495-6114647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125487-6125772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199348-6199423:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X7
translation: MQDSLEVTLPSKQEEEEEEEDEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVDEHFSRALGQVSTLHPESTISKSKMGLTPLWRDSSALSSQRSSFPTSFWTSSYQPPPAPCLGGVHPDFQVTAPPGTFSAADPSPWPGHGLHQTGPAPPPPSSESWRYPLASQVSPSYSHMHDVYMRHHHPHAHMHHRHHHHHHHPPAGSALDPSYGSLLMPSVCTARIPAPQCDITKTDPTTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKSKESPWSRYCLLSTDPLPDLPVFHTASEED
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6125511..6125772,6140599..6141126,6179635..6179671,6199348..6199423)
location: region:6125511-6199423:1
so has part: feature:6125511-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199423:1:exon

XP_020140327.1
type: Protein
SIO_000068: ncbiprotein

position:6125511:1
position: 6125511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6125511-6125772:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6199348-6199423:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X7
translation: MQDSLEVTLPSKQEEEEEEEDEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVDEHFSRALGQVSTLHPESTISKSKMGLTPLWRDSSALSSQRSSFPTSFWTSSYQPPPAPCLGGVHPDFQVTAPPGTFSAADPSPWPGHGLHQTGPAPPPPSSESWRYPLASQVSPSYSHMHDVYMRHHHPHAHMHHRHHHHHHHPPAGSALDPSYGSLLMPSVCTARIPAPQCDITKTDPTTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKSKESPWSRYCLLSTDPLPDLPVFHTASEED
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(6125511..6125772,6140599..6141126,6179635..6179671,6199348..6199423)
location: region:6125511-6199423:1
so has part: feature:6125511-6125772:1:exon
so has part: feature:6140599-6141126:1:exon
so has part: feature:6179635-6179671:1:exon
so has part: feature:6199348-6199423:1:exon

XP_012598489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6125511-6125772:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6140599-6141126:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6179635-6179671:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6199348-6199423:1:exon

LOC105859318
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105859318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6133431..6140590)
location: region:6133431-6140590:-1
so has part: feature:6133431-6140590:-1:exon
subclass of: SO_0000011

105859318
type: Gene
SIO_000068: ncbigene

position:6133431:-1
position: 6133431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6140590:-1
position: 6140590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6133431-6140590:-1:exon

LOC105859318
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105859318
product: uncharacterized LOC105859318, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001148525.1
SIO_010081: LOC105859318
subclass of: SO_0000673
so part of: LOC105859318
location: complement(join(6133431..6134355,6138657..6138735,6139405..6140590))
location: region:6133431-6140590:-1
so has part: feature:6139405-6140590:-1:exon
so has part: feature:6138657-6138735:-1:exon
so has part: feature:6133431-6134355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6139405-6140590:-1:exon

position:6139405:-1
position: 6139405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6138657-6138735:-1:exon

position:6138657:-1
position: 6138657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6138735:-1
position: 6138735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6133431-6134355:-1:exon

position:6134355:-1
position: 6134355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105859318
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105859318
product: uncharacterized LOC105859318, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001148523.1
SIO_010081: LOC105859318
subclass of: SO_0000673
so part of: LOC105859318
location: complement(join(6133431..6134355,6138657..6138735,6138875..6139015,6139405..6140590))
location: region:6133431-6140590:-1
so has part: feature:6139405-6140590:-1:exon
so has part: feature:6138875-6139015:-1:exon
so has part: feature:6138657-6138735:-1:exon
so has part: feature:6133431-6134355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6139405-6140590:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6138875-6139015:-1:exon

position:6138875:-1
position: 6138875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6139015:-1
position: 6139015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6138657-6138735:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6133431-6134355:-1:exon

CADM2
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: CADM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6991719..8073890)
location: region:6991719-8073890:-1
so has part: feature:6991719-8073890:-1:exon
subclass of: SO_0000010

105858050
type: Gene
SIO_000068: ncbigene

position:6991719:-1
position: 6991719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8073890:-1
position: 8073890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6991719-8073890:-1:exon

CADM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CADM2
product: cell adhesion molecule 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 88 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012740909.1
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(6991719..6999465,7000260..7000385,7068626..7068745,7087393..7087571,7110750..7110840,7129187..7129357,7149882..7150019,7152290..7152442,7236567..7236716,8073208..8073890))
location: region:6991719-8073890:-1
so has part: feature:8073208-8073890:-1:exon
so has part: feature:7236567-7236716:-1:exon
so has part: feature:7152290-7152442:-1:exon
so has part: feature:7149882-7150019:-1:exon
so has part: feature:7129187-7129357:-1:exon
so has part: feature:7110750-7110840:-1:exon
so has part: feature:7087393-7087571:-1:exon
so has part: feature:7068626-7068745:-1:exon
so has part: feature:7000260-7000385:-1:exon
so has part: feature:6991719-6999465:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8073208-8073890:-1:exon

position:8073208:-1
position: 8073208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7236567-7236716:-1:exon

position:7236567:-1
position: 7236567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7236716:-1
position: 7236716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7152290-7152442:-1:exon

position:7152290:-1
position: 7152290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7152442:-1
position: 7152442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7149882-7150019:-1:exon

position:7149882:-1
position: 7149882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7150019:-1
position: 7150019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7129187-7129357:-1:exon

position:7129187:-1
position: 7129187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7129357:-1
position: 7129357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7110750-7110840:-1:exon

position:7110750:-1
position: 7110750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7110840:-1
position: 7110840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7087393-7087571:-1:exon

position:7087393:-1
position: 7087393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7087571:-1
position: 7087571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7068626-7068745:-1:exon

position:7068626:-1
position: 7068626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7068745:-1
position: 7068745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7000260-7000385:-1:exon

position:7000260:-1
position: 7000260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7000385:-1
position: 7000385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6991719-6999465:-1:exon

position:6999465:-1
position: 6999465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CADM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CADM2
product: cell adhesion molecule 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 88 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012740910.1
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(6991719..6999465,7000260..7000385,7087393..7087571,7110750..7110840,7129187..7129357,7149882..7150019,7152290..7152442,7236567..7236716,7304194..7304220,8073208..8073890))
location: region:6991719-8073890:-1
so has part: feature:8073208-8073890:-1:exon
so has part: feature:7304194-7304220:-1:exon
so has part: feature:7236567-7236716:-1:exon
so has part: feature:7152290-7152442:-1:exon
so has part: feature:7149882-7150019:-1:exon
so has part: feature:7129187-7129357:-1:exon
so has part: feature:7110750-7110840:-1:exon
so has part: feature:7087393-7087571:-1:exon
so has part: feature:7000260-7000385:-1:exon
so has part: feature:6991719-6999465:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8073208-8073890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7304194-7304220:-1:exon

position:7304194:-1
position: 7304194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7304220:-1
position: 7304220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7236567-7236716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7152290-7152442:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7149882-7150019:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7129187-7129357:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7110750-7110840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7087393-7087571:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7000260-7000385:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6991719-6999465:-1:exon

CADM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CADM2
product: cell adhesion molecule 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 88 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012740908.1
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(6991719..6999465,7000260..7000385,7068626..7068745,7087393..7087571,7110750..7110840,7129187..7129357,7149882..7150019,7152290..7152442,7236567..7236716,7304194..7304220,8073208..8073890))
location: region:6991719-8073890:-1
so has part: feature:8073208-8073890:-1:exon
so has part: feature:7304194-7304220:-1:exon
so has part: feature:7236567-7236716:-1:exon
so has part: feature:7152290-7152442:-1:exon
so has part: feature:7149882-7150019:-1:exon
so has part: feature:7129187-7129357:-1:exon
so has part: feature:7110750-7110840:-1:exon
so has part: feature:7087393-7087571:-1:exon
so has part: feature:7068626-7068745:-1:exon
so has part: feature:7000260-7000385:-1:exon
so has part: feature:6991719-6999465:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8073208-8073890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7304194-7304220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7236567-7236716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7152290-7152442:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7149882-7150019:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7129187-7129357:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7110750-7110840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7087393-7087571:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7068626-7068745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7000260-7000385:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6991719-6999465:-1:exon

CADM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CADM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 2 isoform X2
translation: MIWKRSAVLRFYSVCGLLLQGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAVICRVDHESLNATPQVAMQVLEIHYTPSVKIIPSTPFPQEGQPLILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNILFLNKTDNGTYRCEATNTIGQSSAEYVLIVHDVPNTLLPTTIIPSLTTATVTTTVAITTSPTTSATTSSIRDPNALAGQTGPDHALIGGIVAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(6999347..6999465,7000260..7000385,7068626..7068745,7087393..7087571,7110750..7110840,7129187..7129357,7149882..7150019,7152290..7152442,7236567..7236716,8073208..8073268))
location: region:6999347-8073268:-1
so has part: feature:8073208-8073268:-1:exon
so has part: feature:7236567-7236716:-1:exon
so has part: feature:7152290-7152442:-1:exon
so has part: feature:7149882-7150019:-1:exon
so has part: feature:7129187-7129357:-1:exon
so has part: feature:7110750-7110840:-1:exon
so has part: feature:7087393-7087571:-1:exon
so has part: feature:7068626-7068745:-1:exon
so has part: feature:7000260-7000385:-1:exon
so has part: feature:6999347-6999465:-1:exon

XP_012596363.1
type: Protein
SIO_000068: ncbiprotein

position:6999347:-1
position: 6999347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8073268:-1
position: 8073268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8073208-8073268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7236567-7236716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7152290-7152442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7149882-7150019:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7129187-7129357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7110750-7110840:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7087393-7087571:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7068626-7068745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7000260-7000385:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6999347-6999465:-1:exon

CADM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CADM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 2 isoform X3
translation: MIWKRSAVLRFYSVCGLLLQAAASKNKVKGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAVICRVDHESLNATPQVAMQVLEIHYTPSVKIIPSTPFPQEGQPLILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNILFLNKTDNGTYRCEATNTIGQSSAEYVLIVHDPNALAGQTGPDHALIGGIVAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(6999347..6999465,7000260..7000385,7087393..7087571,7110750..7110840,7129187..7129357,7149882..7150019,7152290..7152442,7236567..7236716,7304194..7304220,8073208..8073268))
location: region:6999347-8073268:-1
so has part: feature:8073208-8073268:-1:exon
so has part: feature:7304194-7304220:-1:exon
so has part: feature:7236567-7236716:-1:exon
so has part: feature:7152290-7152442:-1:exon
so has part: feature:7149882-7150019:-1:exon
so has part: feature:7129187-7129357:-1:exon
so has part: feature:7110750-7110840:-1:exon
so has part: feature:7087393-7087571:-1:exon
so has part: feature:7000260-7000385:-1:exon
so has part: feature:6999347-6999465:-1:exon

XP_012596364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8073208-8073268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7304194-7304220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7236567-7236716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7152290-7152442:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7149882-7150019:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7129187-7129357:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7110750-7110840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7087393-7087571:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7000260-7000385:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6999347-6999465:-1:exon

CADM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CADM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 2 isoform X1
translation: MIWKRSAVLRFYSVCGLLLQAAASKNKVKGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAVICRVDHESLNATPQVAMQVLEIHYTPSVKIIPSTPFPQEGQPLILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNILFLNKTDNGTYRCEATNTIGQSSAEYVLIVHDVPNTLLPTTIIPSLTTATVTTTVAITTSPTTSATTSSIRDPNALAGQTGPDHALIGGIVAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(6999347..6999465,7000260..7000385,7068626..7068745,7087393..7087571,7110750..7110840,7129187..7129357,7149882..7150019,7152290..7152442,7236567..7236716,7304194..7304220,8073208..8073268))
location: region:6999347-8073268:-1
so has part: feature:8073208-8073268:-1:exon
so has part: feature:7304194-7304220:-1:exon
so has part: feature:7236567-7236716:-1:exon
so has part: feature:7152290-7152442:-1:exon
so has part: feature:7149882-7150019:-1:exon
so has part: feature:7129187-7129357:-1:exon
so has part: feature:7110750-7110840:-1:exon
so has part: feature:7087393-7087571:-1:exon
so has part: feature:7068626-7068745:-1:exon
so has part: feature:7000260-7000385:-1:exon
so has part: feature:6999347-6999465:-1:exon

XP_012596362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8073208-8073268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7304194-7304220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7236567-7236716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7152290-7152442:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7149882-7150019:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7129187-7129357:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7110750-7110840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7087393-7087571:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7068626-7068745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7000260-7000385:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6999347-6999465:-1:exon

LOC105858052
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105858052
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7020888..7023628
location: region:7020888-7023628:1
so has part: feature:7020888-7023628:1:exon

105858052
type: Gene
SIO_000068: ncbigene

position:7020888:1
position: 7020888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7023628:1
position: 7023628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7020888-7023628:1:exon

LOC105858052
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105858052
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105858052
subclass of: SO_0000673
so part of: LOC105858052
location: 7020888..7023628
location: region:7020888-7023628:1
so has part: feature:7020888-7023628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7020888-7023628:1:exon

LOC109730177
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7598580..7644463
location: region:7598580-7644463:1
so has part: feature:7598580-7644463:1:exon
subclass of: SO_0000011

109730177
type: Gene
SIO_000068: ncbigene

position:7598580:1
position: 7598580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7644463:1
position: 7644463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7598580-7644463:1:exon

LOC109730177
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC109730177
product: uncharacterized LOC109730177
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222900.1
SIO_010081: LOC109730177
subclass of: SO_0000673
so part of: LOC109730177
location: join(7598580..7598673,7608550..7608596,7644412..7644463)
location: region:7598580-7644463:1
so has part: feature:7598580-7598673:1:exon
so has part: feature:7608550-7608596:1:exon
so has part: feature:7644412-7644463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7598580-7598673:1:exon

position:7598673:1
position: 7598673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7608550-7608596:1:exon

position:7608550:1
position: 7608550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7608596:1
position: 7608596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7644412-7644463:1:exon

position:7644412:1
position: 7644412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109730171
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8186244..8187066)
location: region:8186244-8187066:-1
so has part: feature:8186244-8187066:-1:exon

109730171
type: Gene
SIO_000068: ncbigene

position:8186244:-1
position: 8186244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8187066:-1
position: 8187066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8186244-8187066:-1:exon

LOC109730171
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: LOC109730171
product: 40S ribosomal protein S4, X isoform-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 52 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_002222898.1
SIO_010081: LOC109730171
so part of: LOC109730171
location: complement(8186244..8187066)
location: region:8186244-8187066:-1
so has part: feature:8186244-8187066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8186244-8187066:-1:exon

LOC105882828
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105882828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9243333..9357387
location: region:9243333-9357387:1
so has part: feature:9243333-9357387:1:exon
subclass of: SO_0000011

105882828
type: Gene
SIO_000068: ncbigene

position:9243333:1
position: 9243333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9357387:1
position: 9357387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9243333-9357387:1:exon

LOC105882828
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105882828
product: uncharacterized LOC105882828, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159482.1
SIO_010081: LOC105882828
subclass of: SO_0000673
so part of: LOC105882828
location: join(9243333..9243430,9255376..9256323,9260191..9260247,9276324..9276404,9357169..9357387)
location: region:9243333-9357387:1
so has part: feature:9243333-9243430:1:exon
so has part: feature:9255376-9256323:1:exon
so has part: feature:9260191-9260247:1:exon
so has part: feature:9276324-9276404:1:exon
so has part: feature:9357169-9357387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9243333-9243430:1:exon

position:9243430:1
position: 9243430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9255376-9256323:1:exon

position:9255376:1
position: 9255376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9256323:1
position: 9256323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9260191-9260247:1:exon

position:9260191:1
position: 9260191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9260247:1
position: 9260247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9276324-9276404:1:exon

position:9276324:1
position: 9276324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9276404:1
position: 9276404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9357169-9357387:1:exon

position:9357169:1
position: 9357169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105882828
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105882828
product: uncharacterized LOC105882828, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159480.1
SIO_010081: LOC105882828
subclass of: SO_0000673
so part of: LOC105882828
location: join(9243335..9243430,9255376..9256323,9260191..9260247,9276324..9276596)
location: region:9243335-9276596:1
so has part: feature:9243335-9243430:1:exon
so has part: feature:9255376-9256323:1:exon
so has part: feature:9260191-9260247:1:exon
so has part: feature:9276324-9276596:1:exon

position:9243335:1
position: 9243335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9276596:1
position: 9276596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9243335-9243430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9255376-9256323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9260191-9260247:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9276324-9276596:1:exon

LOC105882828
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105882828
product: uncharacterized LOC105882828, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159483.1
SIO_010081: LOC105882828
subclass of: SO_0000673
so part of: LOC105882828
location: join(9243439..9243568,9255376..9256323,9260191..9260247,9276324..9276596)
location: region:9243439-9276596:1
so has part: feature:9243439-9243568:1:exon
so has part: feature:9255376-9256323:1:exon
so has part: feature:9260191-9260247:1:exon
so has part: feature:9276324-9276596:1:exon

position:9243439:1
position: 9243439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9243439-9243568:1:exon

position:9243568:1
position: 9243568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9255376-9256323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9260191-9260247:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9276324-9276596:1:exon

LOC105882828
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105882828
product: uncharacterized LOC105882828, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159481.1
SIO_010081: LOC105882828
subclass of: SO_0000673
so part of: LOC105882828
location: join(9254661..9254813,9255376..9256323,9260191..9260247,9276324..9276596)
location: region:9254661-9276596:1
so has part: feature:9254661-9254813:1:exon
so has part: feature:9255376-9256323:1:exon
so has part: feature:9260191-9260247:1:exon
so has part: feature:9276324-9276596:1:exon

position:9254661:1
position: 9254661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9254661-9254813:1:exon

position:9254813:1
position: 9254813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9255376-9256323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9260191-9260247:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9276324-9276596:1:exon

LOC105882826
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105882826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10545134..10545525)
location: region:10545134-10545525:-1
so has part: feature:10545134-10545525:-1:exon
subclass of: SO_0000010

105882826
type: Gene
SIO_000068: ncbigene

position:10545134:-1
position: 10545134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10545525:-1
position: 10545525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10545134-10545525:-1:exon

LOC105882826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105882826
product: transcription elongation factor B polypeptide 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012785520.1
SIO_010081: LOC105882826
subclass of: SO_0000673
so part of: LOC105882826
location: complement(join(10545134..10545197,10545262..10545525))
location: region:10545134-10545525:-1
so has part: feature:10545262-10545525:-1:exon
so has part: feature:10545134-10545197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10545262-10545525:-1:exon

position:10545262:-1
position: 10545262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10545134-10545197:-1:exon

position:10545197:-1
position: 10545197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105882826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105882826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor B polypeptide 1-like
translation: MNGEEKTYGGCEGPDAMYVKLTSSDGHEFIVKGEHVLRSGTIKASPGHLLADEANEVNFREIPSHVLSKLRMYFTYKVCYTNSSIPKSSIALKIALELLMVANFLDC
SIO_010081: LOC105882826
subclass of: SO_0000673
so part of: LOC105882826
location: complement(join(10545134..10545197,10545262..10545521))
location: region:10545134-10545521:-1
so has part: feature:10545262-10545521:-1:exon
so has part: feature:10545134-10545197:-1:exon

XP_012640974.1
type: Protein
SIO_000068: ncbiprotein

position:10545521:-1
position: 10545521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10545262-10545521:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10545134-10545197:-1:exon

LOC109730188
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 10874298..10875003
location: region:10874298-10875003:1
so has part: feature:10874298-10875003:1:exon

109730188
type: Gene
SIO_000068: ncbigene

position:10874298:1
position: 10874298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10875003:1
position: 10875003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10874298-10875003:1:exon

LOC109730188
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: LOC109730188
product: barrier-to-autointegration factor pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_002222921.1
SIO_010081: LOC109730188
so part of: LOC109730188
location: 10874298..10875003
location: region:10874298-10875003:1
so has part: feature:10874298-10875003:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10874298-10875003:1:exon

GBE1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: GBE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10897993..11212257
location: region:10897993-11212257:1
so has part: feature:10897993-11212257:1:exon
subclass of: SO_0000010

105882827
type: Gene
SIO_000068: ncbigene

position:10897993:1
position: 10897993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11212257:1
position: 11212257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10897993-11212257:1:exon

GBE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GBE1
product: 1,4-alpha-glucan branching enzyme 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 198 ESTs, 13 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012785521.2
SIO_010081: GBE1
subclass of: SO_0000673
so part of: GBE1
location: join(10897993..10898289,10947048..10947217,11008767..11008882,11051438..11051563,11052394..11052529,11055981..11056071,11059535..11059744,11105228..11105343,11106638..11106765,11109603..11109606,11114368..11114393,11117784..11117869,11125239..11125349,11128738..11128909,11161774..11161958,11163564..11163694,11203698..11203815,11211480..11212257)
location: region:10897993-11212257:1
so has part: feature:10897993-10898289:1:exon
so has part: feature:10947048-10947217:1:exon
so has part: feature:11008767-11008882:1:exon
so has part: feature:11051438-11051563:1:exon
so has part: feature:11052394-11052529:1:exon
so has part: feature:11055981-11056071:1:exon
so has part: feature:11059535-11059744:1:exon
so has part: feature:11105228-11105343:1:exon
so has part: feature:11106638-11106765:1:exon
so has part: feature:11109603-11109606:1:exon
so has part: feature:11114368-11114393:1:exon
so has part: feature:11117784-11117869:1:exon
so has part: feature:11125239-11125349:1:exon
so has part: feature:11128738-11128909:1:exon
so has part: feature:11161774-11161958:1:exon
so has part: feature:11163564-11163694:1:exon
so has part: feature:11203698-11203815:1:exon
so has part: feature:11211480-11212257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10897993-10898289:1:exon

position:10898289:1
position: 10898289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10947048-10947217:1:exon

position:10947048:1
position: 10947048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10947217:1
position: 10947217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11008767-11008882:1:exon

position:11008767:1
position: 11008767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11008882:1
position: 11008882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11051438-11051563:1:exon

position:11051438:1
position: 11051438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11051563:1
position: 11051563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11052394-11052529:1:exon

position:11052394:1
position: 11052394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11052529:1
position: 11052529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11055981-11056071:1:exon

position:11055981:1
position: 11055981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11056071:1
position: 11056071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11059535-11059744:1:exon

position:11059535:1
position: 11059535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11059744:1
position: 11059744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11105228-11105343:1:exon

position:11105228:1
position: 11105228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11105343:1
position: 11105343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11106638-11106765:1:exon

position:11106638:1
position: 11106638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11106765:1
position: 11106765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11109603-11109606:1:exon

position:11109603:1
position: 11109603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11109606:1
position: 11109606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11114368-11114393:1:exon

position:11114368:1
position: 11114368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11114393:1
position: 11114393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11117784-11117869:1:exon

position:11117784:1
position: 11117784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11117869:1
position: 11117869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11125239-11125349:1:exon

position:11125239:1
position: 11125239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11125349:1
position: 11125349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:11128738-11128909:1:exon

position:11128738:1
position: 11128738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11128909:1
position: 11128909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:11161774-11161958:1:exon

position:11161774:1
position: 11161774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11161958:1
position: 11161958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:11163564-11163694:1:exon

position:11163564:1
position: 11163564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11163694:1
position: 11163694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:11203698-11203815:1:exon

position:11203698:1
position: 11203698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11203815:1
position: 11203815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:11211480-11212257:1:exon

position:11211480:1
position: 11211480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GBE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GBE1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 1,4-alpha-glucan-branching enzyme
translation: MADSATPAAGAPDSEAALAAALADVPELARLLEVDPYLKPFAVDFQRRYKRFCQSLNNIGENEGGIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFNGWNPFSHPYKKLDFGKWELYIPPKQDRSVPVPHVSKLKVVVTSKSGEILYRISPWAKYVAREGDNVNYDWIHWDPEHSYKFKHSRPKKPRSLRIYESHVGISSHEGKVASYKHFTCNVLPRIKDLGYNCIQLMAIMEHAYYASFGYQITSFFAASSRYGTPEELKELVDTAHSMGIIVLLDVVHSHASKNSEDGLNMFDGTDSCYFHSGSKGTHDLWDSRLFAYSSWEVLRFLLSNIRWWLEEYGFDGFRFDGVTSMLYHHHGIGQGFSGGYHEYFGLQVDEDALIYLMLANHLVHTLYPDSITIAEDIFYIPALCSECHSVVPNFPGGVGFDYRLXMAIPDKWIQLLKEFKDEDWNMGNIVFTLTNRRYLEKCIAYAESHDQALVGDKTLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMGNEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNRLEERCGWLSAPQAYVSEKHEDNKVIAFERAGLVFIFNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGHQRLDHNTDFFSEAFEHNGRPHSLLVYIPSRVALILQNVDLPN
SIO_010081: GBE1
subclass of: SO_0000673
so part of: GBE1
location: join(10898147..10898289,10947048..10947217,11008767..11008882,11051438..11051563,11052394..11052529,11055981..11056071,11059535..11059744,11105228..11105343,11106638..11106765,11109603..11109606,11114368..11114393,11117784..11117869,11125239..11125349,11128738..11128909,11161774..11161958,11163564..11163694,11203698..11203815,11211480..11211536)
location: region:10898147-11211536:1
so has part: feature:10898147-10898289:1:exon
so has part: feature:10947048-10947217:1:exon
so has part: feature:11008767-11008882:1:exon
so has part: feature:11051438-11051563:1:exon
so has part: feature:11052394-11052529:1:exon
so has part: feature:11055981-11056071:1:exon
so has part: feature:11059535-11059744:1:exon
so has part: feature:11105228-11105343:1:exon
so has part: feature:11106638-11106765:1:exon
so has part: feature:11109603-11109606:1:exon
so has part: feature:11114368-11114393:1:exon
so has part: feature:11117784-11117869:1:exon
so has part: feature:11125239-11125349:1:exon
so has part: feature:11128738-11128909:1:exon
so has part: feature:11161774-11161958:1:exon
so has part: feature:11163564-11163694:1:exon
so has part: feature:11203698-11203815:1:exon
so has part: feature:11211480-11211536:1:exon

XP_012640975.1
type: Protein
SIO_000068: ncbiprotein

position:10898147:1
position: 10898147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11211536:1
position: 11211536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10898147-10898289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10947048-10947217:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11008767-11008882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11051438-11051563:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11052394-11052529:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11055981-11056071:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11059535-11059744:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11105228-11105343:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11106638-11106765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11109603-11109606:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11114368-11114393:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11117784-11117869:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11125239-11125349:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11128738-11128909:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11161774-11161958:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11163564-11163694:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11203698-11203815:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11211480-11211536:1:exon

LOC105856240
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105856240
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11241360..11264685
location: region:11241360-11264685:1
so has part: feature:11241360-11264685:1:exon
subclass of: SO_0000011

105856240
type: Gene
SIO_000068: ncbigene

position:11241360:1
position: 11241360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11264685:1
position: 11264685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11241360-11264685:1:exon

LOC105856240
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105856240
product: uncharacterized LOC105856240
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001147043.2
SIO_010081: LOC105856240
subclass of: SO_0000673
so part of: LOC105856240
location: join(11241360..11242317,11259033..11259198,11260788..11264685)
location: region:11241360-11264685:1
so has part: feature:11241360-11242317:1:exon
so has part: feature:11259033-11259198:1:exon
so has part: feature:11260788-11264685:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11241360-11242317:1:exon

position:11242317:1
position: 11242317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11259033-11259198:1:exon

position:11259033:1
position: 11259033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11259198:1
position: 11259198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11260788-11264685:1:exon

position:11260788:1
position: 11260788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105856241
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105856241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11266436..11293424
location: region:11266436-11293424:1
so has part: feature:11266436-11293424:1:exon
subclass of: SO_0000011

105856241
type: Gene
SIO_000068: ncbigene

position:11266436:1
position: 11266436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11293424:1
position: 11293424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11266436-11293424:1:exon

LOC105856241
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105856241
product: uncharacterized LOC105856241, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001147045.1
SIO_010081: LOC105856241
subclass of: SO_0000673
so part of: LOC105856241
location: join(11266436..11269317,11286359..11286468,11291792..11291956,11293055..11293424)
location: region:11266436-11293424:1
so has part: feature:11266436-11269317:1:exon
so has part: feature:11286359-11286468:1:exon
so has part: feature:11291792-11291956:1:exon
so has part: feature:11293055-11293424:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11266436-11269317:1:exon

position:11269317:1
position: 11269317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11286359-11286468:1:exon

position:11286359:1
position: 11286359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11286468:1
position: 11286468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11291792-11291956:1:exon

position:11291792:1
position: 11291792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11291956:1
position: 11291956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11293055-11293424:1:exon

position:11293055:1
position: 11293055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105856241
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105856241
product: uncharacterized LOC105856241, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001147044.1
SIO_010081: LOC105856241
subclass of: SO_0000673
so part of: LOC105856241
location: join(11266436..11269317,11286359..11286468,11291792..11292631)
location: region:11266436-11292631:1
so has part: feature:11266436-11269317:1:exon
so has part: feature:11286359-11286468:1:exon
so has part: feature:11291792-11292631:1:exon

position:11292631:1
position: 11292631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11266436-11269317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11286359-11286468:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11291792-11292631:1:exon

LOC105856239
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105856239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(11278349..11284542)
location: region:11278349-11284542:-1
so has part: feature:11278349-11284542:-1:exon

105856239
type: Gene
SIO_000068: ncbigene

position:11278349:-1
position: 11278349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11284542:-1
position: 11284542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11278349-11284542:-1:exon

LOC105856239
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105856239
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105856239
subclass of: SO_0000673
so part of: LOC105856239
location: complement(11278349..11284542)
location: region:11278349-11284542:-1
so has part: feature:11278349-11284542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11278349-11284542:-1:exon

LOC105856244
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105856244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11602166..11608393)
location: region:11602166-11608393:-1
so has part: feature:11602166-11608393:-1:exon
subclass of: SO_0000011

105856244
type: Gene
SIO_000068: ncbigene

position:11602166:-1
position: 11602166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11608393:-1
position: 11608393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11602166-11608393:-1:exon

LOC105856244
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105856244
product: uncharacterized LOC105856244
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 46% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001147046.2
SIO_010081: LOC105856244
subclass of: SO_0000673
so part of: LOC105856244
location: complement(join(11602166..11602695,11605834..11605980,11608314..11608393))
location: region:11602166-11608393:-1
so has part: feature:11608314-11608393:-1:exon
so has part: feature:11605834-11605980:-1:exon
so has part: feature:11602166-11602695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11608314-11608393:-1:exon

position:11608314:-1
position: 11608314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11605834-11605980:-1:exon

position:11605834:-1
position: 11605834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11605980:-1
position: 11605980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11602166-11602695:-1:exon

position:11602695:-1
position: 11602695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105856243
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105856243
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 12576560..12579823
location: region:12576560-12579823:1
so has part: feature:12576560-12579823:1:exon

105856243
type: Gene
SIO_000068: ncbigene

position:12576560:1
position: 12576560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12579823:1
position: 12579823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12576560-12579823:1:exon

LOC105856243
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105856243
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105856243
subclass of: SO_0000673
so part of: LOC105856243
location: 12576560..12577604
location: region:12576560-12577604:1
so has part: feature:12576560-12577604:1:exon

position:12577604:1
position: 12577604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12576560-12577604:1:exon

LOC105856243
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105856243
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105856243
subclass of: SO_0000673
so part of: LOC105856243
location: 12578818..12579317
location: region:12578818-12579317:1
so has part: feature:12578818-12579317:1:exon

position:12578818:1
position: 12578818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12579317:1
position: 12579317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12578818-12579317:1:exon

LOC105856243
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105856243
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105856243
subclass of: SO_0000673
so part of: LOC105856243
location: 12579591..12579823
location: region:12579591-12579823:1
so has part: feature:12579591-12579823:1:exon

position:12579591:1
position: 12579591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12579591-12579823:1:exon

ROBO1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12690444..13873996
location: region:12690444-13873996:1
so has part: feature:12690444-13873996:1:exon
subclass of: SO_0000010

105855900
type: Gene
SIO_000068: ncbigene

position:12690444:1
position: 12690444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13873996:1
position: 13873996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12690444-13873996:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 158 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020284809.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(12690444..12690733,12857706..12857844,13350428..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13873996)
location: region:12690444-13873996:1
so has part: feature:12690444-12690733:1:exon
so has part: feature:12857706-12857844:1:exon
so has part: feature:13350428-13350511:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13825011-13825037:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835556-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13873996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12690444-12690733:1:exon

position:12690733:1
position: 12690733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12857706-12857844:1:exon

position:12857706:1
position: 12857706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12857844:1
position: 12857844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13350428-13350511:1:exon

position:13350428:1
position: 13350428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13350511:1
position: 13350511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13539806-13540132:1:exon

position:13539806:1
position: 13539806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13540132:1
position: 13540132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13728893-13729050:1:exon

position:13728893:1
position: 13728893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13729050:1
position: 13729050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13756337-13756457:1:exon

position:13756337:1
position: 13756337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13756457:1
position: 13756457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13756838-13756976:1:exon

position:13756838:1
position: 13756838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13756976:1
position: 13756976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13759033-13759160:1:exon

position:13759033:1
position: 13759033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13759160:1
position: 13759160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13786104-13786228:1:exon

position:13786104:1
position: 13786104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13786228:1
position: 13786228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13788426-13788597:1:exon

position:13788426:1
position: 13788426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13788597:1
position: 13788597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13801802-13802007:1:exon

position:13801802:1
position: 13801802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13802007:1
position: 13802007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13803571-13803652:1:exon

position:13803571:1
position: 13803571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13803652:1
position: 13803652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13803836-13804004:1:exon

position:13803836:1
position: 13803836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13804004:1
position: 13804004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13804103-13804269:1:exon

position:13804103:1
position: 13804103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13804269:1
position: 13804269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:13810400-13810521:1:exon

position:13810400:1
position: 13810400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13810521:1
position: 13810521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:13811185-13811416:1:exon

position:13811185:1
position: 13811185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13811416:1
position: 13811416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:13812365-13812486:1:exon

position:13812365:1
position: 13812365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13812486:1
position: 13812486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:13816005-13816176:1:exon

position:13816005:1
position: 13816005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13816176:1
position: 13816176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:13820710-13820907:1:exon

position:13820710:1
position: 13820710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13820907:1
position: 13820907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:13825011-13825037:1:exon

position:13825011:1
position: 13825011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13825037:1
position: 13825037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:13826437-13826479:1:exon

position:13826437:1
position: 13826437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13826479:1
position: 13826479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:13833063-13833217:1:exon

position:13833063:1
position: 13833063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13833217:1
position: 13833217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:13835556-13835891:1:exon

position:13835556:1
position: 13835556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13835891:1
position: 13835891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:13837985-13838092:1:exon

position:13837985:1
position: 13837985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13838092:1
position: 13838092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:13840707-13840851:1:exon

position:13840707:1
position: 13840707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13840851:1
position: 13840851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:13844108-13844356:1:exon

position:13844108:1
position: 13844108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13844356:1
position: 13844356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:13853047-13853453:1:exon

position:13853047:1
position: 13853047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13853453:1
position: 13853453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:13856850-13857002:1:exon

position:13856850:1
position: 13856850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13857002:1
position: 13857002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:13865074-13865382:1:exon

position:13865074:1
position: 13865074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13865382:1
position: 13865382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:13870898-13871094:1:exon

position:13870898:1
position: 13870898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13871094:1
position: 13871094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:13872328-13873996:1:exon

position:13872328:1
position: 13872328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 157 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020284808.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(12690445..12690733,12857706..12857844,13350428..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13873995)
location: region:12690445-13873995:1
so has part: feature:12690445-12690733:1:exon
so has part: feature:12857706-12857844:1:exon
so has part: feature:13350428-13350511:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13782757-13782765:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13825011-13825037:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835556-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13873995:1:exon

position:12690445:1
position: 12690445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13873995:1
position: 13873995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12690445-12690733:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12857706-12857844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13350428-13350511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13539806-13540132:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13728893-13729050:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13756337-13756457:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13756838-13756976:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13759033-13759160:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13782757-13782765:1:exon

position:13782757:1
position: 13782757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13782765:1
position: 13782765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13786104-13786228:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13788426-13788597:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13801802-13802007:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13803571-13803652:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13803836-13804004:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13804103-13804269:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13810400-13810521:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13811185-13811416:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13812365-13812486:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13816005-13816176:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13820710-13820907:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13825011-13825037:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13826437-13826479:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13833063-13833217:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13835556-13835891:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13837985-13838092:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13840707-13840851:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13844108-13844356:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13853047-13853453:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13856850-13857002:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:13865074-13865382:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:13872328-13873995:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X5
translation: MKWKHLPFLVIISLLSLSKNHLFPAQLIPDPEDLERGNDNGTPIPTSDNDDNSLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPLPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANYGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSDPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHLQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLPSVEARTDRSSDRKGGSYKGREVLDGRQVAEMRTNLGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(12857757..12857844,13350428..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13872342)
location: region:12857757-13872342:1
so has part: feature:12857757-12857844:1:exon
so has part: feature:13350428-13350511:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13782757-13782765:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13825011-13825037:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835556-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13872342:1:exon

XP_020140397.1
type: Protein
SIO_000068: ncbiprotein

position:12857757:1
position: 12857757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13872342:1
position: 13872342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12857757-12857844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13350428-13350511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13539806-13540132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13728893-13729050:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13756337-13756457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13756838-13756976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13759033-13759160:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13782757-13782765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13786104-13786228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13788426-13788597:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13801802-13802007:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13803571-13803652:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13803836-13804004:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13804103-13804269:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13810400-13810521:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13811185-13811416:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13812365-13812486:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13816005-13816176:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13820710-13820907:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13825011-13825037:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13826437-13826479:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13833063-13833217:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13835556-13835891:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13837985-13838092:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13840707-13840851:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13844108-13844356:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13853047-13853453:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13856850-13857002:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13865074-13865382:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:13872328-13872342:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X6
translation: MKWKHLPFLVIISLLSLSKNHLFPAQLIPDPEDLERGNDNGTPIPTSDNDDNSLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPLPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANYGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSDPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHLQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLPSVEARTDRSSDRKGGSYKGREVLDGRQVAEMRTNLGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(12857757..12857844,13350428..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13872342)
location: region:12857757-13872342:1
so has part: feature:12857757-12857844:1:exon
so has part: feature:13350428-13350511:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13825011-13825037:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835556-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13872342:1:exon

XP_020140398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12857757-12857844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13350428-13350511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13539806-13540132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13728893-13729050:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13756337-13756457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13756838-13756976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13759033-13759160:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13786104-13786228:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13788426-13788597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13801802-13802007:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13803571-13803652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13803836-13804004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13804103-13804269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13810400-13810521:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13811185-13811416:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13812365-13812486:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13816005-13816176:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13820710-13820907:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13825011-13825037:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13826437-13826479:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13833063-13833217:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13835556-13835891:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13837985-13838092:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13840707-13840851:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13844108-13844356:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13853047-13853453:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13856850-13857002:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13865074-13865382:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:13872328-13872342:1:exon

LOC105856242
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105856242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(13016453..13018526)
location: region:13016453-13018526:-1
so has part: feature:13016453-13018526:-1:exon

105856242
type: Gene
SIO_000068: ncbigene

position:13016453:-1
position: 13016453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13018526:-1
position: 13018526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13016453-13018526:-1:exon

LOC105856242
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105856242
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105856242
subclass of: SO_0000673
so part of: LOC105856242
location: complement(13016453..13018526)
location: region:13016453-13018526:-1
so has part: feature:13016453-13018526:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13016453-13018526:-1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 154 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284807.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13055745..13055958,13350428..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13873995)
location: region:13055745-13873995:1
so has part: feature:13055745-13055958:1:exon
so has part: feature:13350428-13350511:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13782757-13782765:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13825011-13825037:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835556-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13873995:1:exon

position:13055745:1
position: 13055745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13055745-13055958:1:exon

position:13055958:1
position: 13055958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13350428-13350511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13539806-13540132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13728893-13729050:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13756337-13756457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13756838-13756976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13759033-13759160:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13782757-13782765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13786104-13786228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13788426-13788597:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13801802-13802007:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13803571-13803652:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13803836-13804004:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13804103-13804269:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13810400-13810521:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13811185-13811416:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13812365-13812486:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13816005-13816176:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13820710-13820907:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13825011-13825037:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13826437-13826479:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13833063-13833217:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13835556-13835891:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13837985-13838092:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13840707-13840851:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13844108-13844356:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13853047-13853453:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13856850-13857002:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13865074-13865382:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:13872328-13873995:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X4
translation: MAVLLLMLLLLMAEITSPVGVSGRMKAGSRWRGEKNHPEDLERGNDNGTPIPTSDNDDNSLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPLPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANYGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSDPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHLQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLPSVEARTDRSSDRKGGSYKGREVLDGRQVAEMRTNLGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13055850..13055958,13350428..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13872342)
location: region:13055850-13872342:1
so has part: feature:13055850-13055958:1:exon
so has part: feature:13350428-13350511:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13782757-13782765:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13825011-13825037:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835556-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13872342:1:exon

XP_020140396.1
type: Protein
SIO_000068: ncbiprotein

position:13055850:1
position: 13055850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13055850-13055958:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13350428-13350511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13539806-13540132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13728893-13729050:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13756337-13756457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13756838-13756976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13759033-13759160:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13782757-13782765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13786104-13786228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13788426-13788597:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13801802-13802007:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13803571-13803652:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13803836-13804004:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13804103-13804269:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13810400-13810521:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13811185-13811416:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13812365-13812486:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13816005-13816176:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13820710-13820907:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13825011-13825037:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13826437-13826479:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13833063-13833217:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13835556-13835891:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13837985-13838092:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13840707-13840851:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13844108-13844356:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13853047-13853453:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13856850-13857002:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13865074-13865382:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:13872328-13872342:1:exon

LOC105861461
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105861461
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13129437..13132781)
location: region:13129437-13132781:-1
so has part: feature:13129437-13132781:-1:exon
subclass of: SO_0000011

105861461
type: Gene
SIO_000068: ncbigene

position:13129437:-1
position: 13129437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13132781:-1
position: 13132781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13129437-13132781:-1:exon

LOC105861461
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105861461
product: uncharacterized LOC105861461
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001149558.2
SIO_010081: LOC105861461
subclass of: SO_0000673
so part of: LOC105861461
location: complement(join(13129437..13129779,13130386..13130509,13130688..13130801,13132738..13132781))
location: region:13129437-13132781:-1
so has part: feature:13132738-13132781:-1:exon
so has part: feature:13130688-13130801:-1:exon
so has part: feature:13130386-13130509:-1:exon
so has part: feature:13129437-13129779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13132738-13132781:-1:exon

position:13132738:-1
position: 13132738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13130688-13130801:-1:exon

position:13130688:-1
position: 13130688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13130801:-1
position: 13130801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13130386-13130509:-1:exon

position:13130386:-1
position: 13130386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13130509:-1
position: 13130509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13129437-13129779:-1:exon

position:13129779:-1
position: 13129779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 154 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012737155.2
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13350118..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13873995)
location: region:13350118-13873995:1
so has part: feature:13350118-13350511:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13782757-13782765:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13825011-13825037:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835556-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13873995:1:exon

position:13350118:1
position: 13350118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13350118-13350511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13539806-13540132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13728893-13729050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13756337-13756457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13756838-13756976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13759033-13759160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13782757-13782765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13786104-13786228:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13788426-13788597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13801802-13802007:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13803571-13803652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13803836-13804004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13804103-13804269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13810400-13810521:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13811185-13811416:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13812365-13812486:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13816005-13816176:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13820710-13820907:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13825011-13825037:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13826437-13826479:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13833063-13833217:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13835556-13835891:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13837985-13838092:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13840707-13840851:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13844108-13844356:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13853047-13853453:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13856850-13857002:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13865074-13865382:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:13872328-13873995:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 145 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012737158.2
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13350118..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835721..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13873995)
location: region:13350118-13873995:1
so has part: feature:13350118-13350511:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13782757-13782765:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13825011-13825037:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835721-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13873995:1:exon

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position:13835721:1
position: 13835721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 30
SIO_000628: feature:13872328-13873995:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 153 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012737157.2
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13350118..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13873995)
location: region:13350118-13873995:1
so has part: feature:13350118-13350511:1:exon
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SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13872328-13873995:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 144 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012737159.2
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13350118..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13826437..13826479,13833063..13833217,13835721..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13873995)
location: region:13350118-13873995:1
so has part: feature:13350118-13350511:1:exon
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SIO_000628: feature:13872328-13873995:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 155 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012737156.2
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13350118..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13873995)
location: region:13350118-13873995:1
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ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X1
translation: MMQRPSRGLVCRSRGKDEVCCVLSLCVFLSHVDLLVSGHAVIEMATTVTTVTPSAALVLFPTDPEDLERGNDNGTPIPTSDNDDNSLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPLPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANYGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSDPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHLQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLPSVEARTDRSSDRKGGSYKGREVLDGRQVAEMRTNLGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13350241..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13872342)
location: region:13350241-13872342:1
so has part: feature:13350241-13350511:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13782757-13782765:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13825011-13825037:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835556-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13872342:1:exon

XP_012592609.1
type: Protein
SIO_000068: ncbiprotein

position:13350241:1
position: 13350241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13350241-13350511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13539806-13540132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13728893-13729050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13756337-13756457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13756838-13756976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13759033-13759160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13782757-13782765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13786104-13786228:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13788426-13788597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13801802-13802007:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13803571-13803652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13803836-13804004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13804103-13804269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13810400-13810521:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13811185-13811416:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13812365-13812486:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13816005-13816176:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13820710-13820907:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13825011-13825037:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13826437-13826479:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13833063-13833217:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13835556-13835891:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13837985-13838092:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13840707-13840851:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13844108-13844356:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13853047-13853453:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13856850-13857002:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13865074-13865382:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:13872328-13872342:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X7
translation: MMQRPSRGLVCRSRGKDEVCCVLSLCVFLSHVDLLVSGHAVIEMATTVTTVTPSAALVLFPTDPEDLERGNDNGTPIPTSDNDDNSLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPLPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANYGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSDPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHLQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLPSVEARTDRSSDRKGGSYKGREVLDGRQVAEMRTNLGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13350241..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835721..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13872342)
location: region:13350241-13872342:1
so has part: feature:13350241-13350511:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13782757-13782765:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13825011-13825037:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835721-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13872342:1:exon

XP_012592612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13350241-13350511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13539806-13540132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13728893-13729050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13756337-13756457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13756838-13756976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13759033-13759160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13782757-13782765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13786104-13786228:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13788426-13788597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13801802-13802007:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13803571-13803652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13803836-13804004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13804103-13804269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13810400-13810521:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13811185-13811416:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13812365-13812486:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13816005-13816176:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13820710-13820907:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13825011-13825037:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13826437-13826479:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13833063-13833217:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13835721-13835891:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13837985-13838092:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13840707-13840851:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13844108-13844356:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13853047-13853453:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13856850-13857002:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13865074-13865382:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:13872328-13872342:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X3
translation: MMQRPSRGLVCRSRGKDEVCCVLSLCVFLSHVDLLVSGHAVIEMATTVTTVTPSAALVLFPTDPEDLERGNDNGTPIPTSDNDDNSLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPLPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANYGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSDPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHLQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLPSVEARTDRSSDRKGGSYKGREVLDGRQVAEMRTNLGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13350241..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13872342)
location: region:13350241-13872342:1
so has part: feature:13350241-13350511:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13782757-13782765:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835556-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13872342:1:exon

XP_012592611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13350241-13350511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13539806-13540132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13728893-13729050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13756337-13756457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13756838-13756976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13759033-13759160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13782757-13782765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13786104-13786228:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13788426-13788597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13801802-13802007:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13803571-13803652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13803836-13804004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13804103-13804269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13810400-13810521:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13811185-13811416:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13812365-13812486:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13816005-13816176:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13820710-13820907:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13826437-13826479:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13833063-13833217:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13835556-13835891:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13837985-13838092:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13840707-13840851:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13844108-13844356:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13853047-13853453:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13856850-13857002:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13865074-13865382:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13872328-13872342:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X8
translation: MMQRPSRGLVCRSRGKDEVCCVLSLCVFLSHVDLLVSGHAVIEMATTVTTVTPSAALVLFPTDPEDLERGNDNGTPIPTSDNDDNSLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPLPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANYGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSDPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHLQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLPSVEARTDRSSDRKGGSYKGREVLDGRQVAEMRTNLGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13350241..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13826437..13826479,13833063..13833217,13835721..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13872342)
location: region:13350241-13872342:1
so has part: feature:13350241-13350511:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13782757-13782765:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835721-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13872342:1:exon

XP_012592613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13350241-13350511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13539806-13540132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13728893-13729050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13756337-13756457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13756838-13756976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13759033-13759160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13782757-13782765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13786104-13786228:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13788426-13788597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13801802-13802007:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13803571-13803652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13803836-13804004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13804103-13804269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13810400-13810521:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13811185-13811416:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13812365-13812486:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13816005-13816176:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13820710-13820907:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13826437-13826479:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13833063-13833217:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13835721-13835891:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13837985-13838092:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13840707-13840851:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13844108-13844356:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13853047-13853453:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13856850-13857002:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13865074-13865382:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13872328-13872342:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X2
translation: MMQRPSRGLVCRSRGKDEVCCVLSLCVFLSHVDLLVSGHAVIEMATTVTTVTPSAALVLFPTDPEDLERGNDNGTPIPTSDNDDNSLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPLPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANYGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSDPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHLQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLPSVEARTDRSSDRKGGSYKGREVLDGRQVAEMRTNLGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13350241..13350511,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13872342)
location: region:13350241-13872342:1
so has part: feature:13350241-13350511:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13825011-13825037:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835556-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13872342:1:exon

XP_012592610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13350241-13350511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13539806-13540132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13728893-13729050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13756337-13756457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13756838-13756976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13759033-13759160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13786104-13786228:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13788426-13788597:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13801802-13802007:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13803571-13803652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13803836-13804004:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13804103-13804269:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13810400-13810521:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13811185-13811416:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13812365-13812486:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13816005-13816176:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13820710-13820907:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13825011-13825037:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13826437-13826479:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13833063-13833217:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13835556-13835891:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13837985-13838092:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13840707-13840851:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13844108-13844356:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13853047-13853453:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13856850-13857002:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13865074-13865382:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13872328-13872342:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 176 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012737160.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13459067..13460159,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13873995)
location: region:13459067-13873995:1
so has part: feature:13459067-13460159:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13782757-13782765:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13825011-13825037:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835556-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13873995:1:exon

position:13459067:1
position: 13459067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13459067-13460159:1:exon

position:13460159:1
position: 13460159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 30
SIO_000628: feature:13872328-13873995:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 177 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012737161.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13459067..13460159,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13873995)
location: region:13459067-13873995:1
so has part: feature:13459067-13460159:1:exon
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SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13872328-13873995:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 174 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012737162.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13459095..13460159,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13873996)
location: region:13459095-13873996:1
so has part: feature:13459095-13460159:1:exon
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so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13873996:1:exon

position:13459095:1
position: 13459095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 29
SIO_000628: feature:13872328-13873996:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 165 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012737163.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13459095..13460159,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13826437..13826479,13833063..13833217,13835721..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13873996)
location: region:13459095-13873996:1
so has part: feature:13459095-13460159:1:exon
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ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X9
translation: MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPLPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANYGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSDPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHLQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLPSVEARTDRSSDRKGGSYKGREVLDGRQVAEMRTNLGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13460105..13460159,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13872342)
location: region:13460105-13872342:1
so has part: feature:13460105-13460159:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13782757-13782765:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13825011-13825037:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835556-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13872342:1:exon

XP_012592614.1
type: Protein
SIO_000068: ncbiprotein

position:13460105:1
position: 13460105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13460105-13460159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13539806-13540132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13728893-13729050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13756337-13756457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13756838-13756976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13759033-13759160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13782757-13782765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13786104-13786228:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13788426-13788597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13801802-13802007:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13803571-13803652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13803836-13804004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13804103-13804269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13810400-13810521:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13811185-13811416:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13812365-13812486:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13816005-13816176:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13820710-13820907:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13825011-13825037:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13826437-13826479:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13833063-13833217:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13835556-13835891:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13837985-13838092:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13840707-13840851:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13844108-13844356:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13853047-13853453:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13856850-13857002:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13865074-13865382:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:13872328-13872342:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X11
translation: MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPLPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANYGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSDPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHLQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLPSVEARTDRSSDRKGGSYKGREVLDGRQVAEMRTNLGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13460105..13460159,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13872342)
location: region:13460105-13872342:1
so has part: feature:13460105-13460159:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13782757-13782765:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835556-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13872342:1:exon

XP_012592616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13460105-13460159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13539806-13540132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13728893-13729050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13756337-13756457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13756838-13756976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13759033-13759160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13782757-13782765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13786104-13786228:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13788426-13788597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13801802-13802007:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13803571-13803652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13803836-13804004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13804103-13804269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13810400-13810521:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13811185-13811416:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13812365-13812486:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13816005-13816176:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13820710-13820907:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13826437-13826479:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13833063-13833217:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13835556-13835891:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13837985-13838092:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13840707-13840851:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13844108-13844356:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13853047-13853453:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13856850-13857002:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13865074-13865382:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13872328-13872342:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X12
translation: MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPLPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANYGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSDPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHLQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLPSVEARTDRSSDRKGGSYKGREVLDGRQVAEMRTNLGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13460105..13460159,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13782757..13782765,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13826437..13826479,13833063..13833217,13835721..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13872342)
location: region:13460105-13872342:1
so has part: feature:13460105-13460159:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13782757-13782765:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835721-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13872342:1:exon

XP_012592617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13460105-13460159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13539806-13540132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13728893-13729050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13756337-13756457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13756838-13756976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13759033-13759160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13782757-13782765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13786104-13786228:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13788426-13788597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13801802-13802007:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13803571-13803652:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13803836-13804004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13804103-13804269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13810400-13810521:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13811185-13811416:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13812365-13812486:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13816005-13816176:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13820710-13820907:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13826437-13826479:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13833063-13833217:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13835721-13835891:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13837985-13838092:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13840707-13840851:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13844108-13844356:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13853047-13853453:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13856850-13857002:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13865074-13865382:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13872328-13872342:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X10
translation: MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPLPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANYGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSDPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHLQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLPSVEARTDRSSDRKGGSYKGREVLDGRQVAEMRTNLGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(13460105..13460159,13539806..13540132,13728893..13729050,13756337..13756457,13756838..13756976,13759033..13759160,13786104..13786228,13788426..13788597,13801802..13802007,13803571..13803652,13803836..13804004,13804103..13804269,13810400..13810521,13811185..13811416,13812365..13812486,13816005..13816176,13820710..13820907,13825011..13825037,13826437..13826479,13833063..13833217,13835556..13835891,13837985..13838092,13840707..13840851,13844108..13844356,13853047..13853453,13856850..13857002,13865074..13865382,13870898..13871094,13872328..13872342)
location: region:13460105-13872342:1
so has part: feature:13460105-13460159:1:exon
so has part: feature:13539806-13540132:1:exon
so has part: feature:13728893-13729050:1:exon
so has part: feature:13756337-13756457:1:exon
so has part: feature:13756838-13756976:1:exon
so has part: feature:13759033-13759160:1:exon
so has part: feature:13786104-13786228:1:exon
so has part: feature:13788426-13788597:1:exon
so has part: feature:13801802-13802007:1:exon
so has part: feature:13803571-13803652:1:exon
so has part: feature:13803836-13804004:1:exon
so has part: feature:13804103-13804269:1:exon
so has part: feature:13810400-13810521:1:exon
so has part: feature:13811185-13811416:1:exon
so has part: feature:13812365-13812486:1:exon
so has part: feature:13816005-13816176:1:exon
so has part: feature:13820710-13820907:1:exon
so has part: feature:13825011-13825037:1:exon
so has part: feature:13826437-13826479:1:exon
so has part: feature:13833063-13833217:1:exon
so has part: feature:13835556-13835891:1:exon
so has part: feature:13837985-13838092:1:exon
so has part: feature:13840707-13840851:1:exon
so has part: feature:13844108-13844356:1:exon
so has part: feature:13853047-13853453:1:exon
so has part: feature:13856850-13857002:1:exon
so has part: feature:13865074-13865382:1:exon
so has part: feature:13870898-13871094:1:exon
so has part: feature:13872328-13872342:1:exon

XP_012592615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13460105-13460159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13539806-13540132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13728893-13729050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13756337-13756457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13756838-13756976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13759033-13759160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13786104-13786228:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13788426-13788597:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13801802-13802007:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13803571-13803652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13803836-13804004:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13804103-13804269:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13810400-13810521:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13811185-13811416:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13812365-13812486:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13816005-13816176:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13820710-13820907:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13825011-13825037:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13826437-13826479:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13833063-13833217:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13835556-13835891:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13837985-13838092:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13840707-13840851:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13844108-13844356:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13853047-13853453:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13856850-13857002:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13865074-13865382:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:13870898-13871094:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:13872328-13872342:1:exon

LOC105855906
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105855906
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(13899339..13906779)
location: region:13899339-13906779:-1
so has part: feature:13899339-13906779:-1:exon

105855906
type: Gene
SIO_000068: ncbigene

position:13899339:-1
position: 13899339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13906779:-1
position: 13906779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13899339-13906779:-1:exon

LOC105855906
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105855906
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC105855906
subclass of: SO_0000673
so part of: LOC105855906
location: complement(13899339..13900269)
location: region:13899339-13900269:-1
so has part: feature:13899339-13900269:-1:exon

position:13900269:-1
position: 13900269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13899339-13900269:-1:exon

LOC105855906
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105855906
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC105855906
subclass of: SO_0000673
so part of: LOC105855906
location: complement(13906756..13906779)
location: region:13906756-13906779:-1
so has part: feature:13906756-13906779:-1:exon

position:13906756:-1
position: 13906756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13906756-13906779:-1:exon

LOC105855907
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105855907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(13940026..13940427)
location: region:13940026-13940427:-1
so has part: feature:13940026-13940427:-1:exon

105855907
type: Gene
SIO_000068: ncbigene

position:13940026:-1
position: 13940026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13940427:-1
position: 13940427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13940026-13940427:-1:exon

LOC105855907
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105855907
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC105855907
subclass of: SO_0000673
so part of: LOC105855907
location: complement(13940026..13940427)
location: region:13940026-13940427:-1
so has part: feature:13940026-13940427:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13940026-13940427:-1:exon

ROBO2
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(14764926..16124593)
location: region:14764926-16124593:-1
so has part: feature:14764926-16124593:-1:exon
subclass of: SO_0000010

105855902
type: Gene
SIO_000068: ncbigene

position:14764926:-1
position: 14764926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16124593:-1
position: 16124593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14764926-16124593:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 72 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284756.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14764926..14768789,14770089..14770289,14779217..14779390,14781616..14781798,14790477..14790682,14795159..14795419,14809616..14809772,14815215..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14906018,14943865..14944003,14962284..14962404,14965825..14965982,15320547..15320873,16113735..16124593))
location: region:14764926-16124593:-1
so has part: feature:16113735-16124593:-1:exon
so has part: feature:15320547-15320873:-1:exon
so has part: feature:14965825-14965982:-1:exon
so has part: feature:14962284-14962404:-1:exon
so has part: feature:14943865-14944003:-1:exon
so has part: feature:14905891-14906018:-1:exon
so has part: feature:14901472-14901483:-1:exon
so has part: feature:14884911-14885035:-1:exon
so has part: feature:14880588-14880759:-1:exon
so has part: feature:14871510-14871715:-1:exon
so has part: feature:14867230-14867311:-1:exon
so has part: feature:14866632-14866794:-1:exon
so has part: feature:14864843-14865009:-1:exon
so has part: feature:14861602-14861723:-1:exon
so has part: feature:14853653-14853884:-1:exon
so has part: feature:14850793-14850917:-1:exon
so has part: feature:14848290-14848461:-1:exon
so has part: feature:14828728-14828910:-1:exon
so has part: feature:14822602-14822644:-1:exon
so has part: feature:14821025-14821152:-1:exon
so has part: feature:14815215-14815496:-1:exon
so has part: feature:14809616-14809772:-1:exon
so has part: feature:14795159-14795419:-1:exon
so has part: feature:14790477-14790682:-1:exon
so has part: feature:14781616-14781798:-1:exon
so has part: feature:14779217-14779390:-1:exon
so has part: feature:14770089-14770289:-1:exon
so has part: feature:14764926-14768789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16113735-16124593:-1:exon

position:16113735:-1
position: 16113735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15320547-15320873:-1:exon

position:15320547:-1
position: 15320547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15320873:-1
position: 15320873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14965825-14965982:-1:exon

position:14965825:-1
position: 14965825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14965982:-1
position: 14965982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14962284-14962404:-1:exon

position:14962284:-1
position: 14962284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14962404:-1
position: 14962404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14943865-14944003:-1:exon

position:14943865:-1
position: 14943865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14944003:-1
position: 14944003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14905891-14906018:-1:exon

position:14905891:-1
position: 14905891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14906018:-1
position: 14906018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14901472-14901483:-1:exon

position:14901472:-1
position: 14901472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14901483:-1
position: 14901483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14884911-14885035:-1:exon

position:14884911:-1
position: 14884911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14885035:-1
position: 14885035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:14880588-14880759:-1:exon

position:14880588:-1
position: 14880588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14880759:-1
position: 14880759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:14871510-14871715:-1:exon

position:14871510:-1
position: 14871510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14871715:-1
position: 14871715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:14867230-14867311:-1:exon

position:14867230:-1
position: 14867230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14867311:-1
position: 14867311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:14866632-14866794:-1:exon

position:14866632:-1
position: 14866632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14866794:-1
position: 14866794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:14864843-14865009:-1:exon

position:14864843:-1
position: 14864843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14865009:-1
position: 14865009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:14861602-14861723:-1:exon

position:14861602:-1
position: 14861602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14861723:-1
position: 14861723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:14853653-14853884:-1:exon

position:14853653:-1
position: 14853653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14853884:-1
position: 14853884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:14850793-14850917:-1:exon

position:14850793:-1
position: 14850793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14850917:-1
position: 14850917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:14848290-14848461:-1:exon

position:14848290:-1
position: 14848290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14848461:-1
position: 14848461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:14828728-14828910:-1:exon

position:14828728:-1
position: 14828728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14828910:-1
position: 14828910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:14822602-14822644:-1:exon

position:14822602:-1
position: 14822602
reference: sequence
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type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO2
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note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 62 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284749.1
SIO_010081: ROBO2
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ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 60 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284748.1
SIO_010081: ROBO2
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ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 54 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284750.1
SIO_010081: ROBO2
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ROBO2
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subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 58 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284747.1
SIO_010081: ROBO2
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ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 60 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284752.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14764926..14768789,14770089..14770289,14772133..14772405,14779217..14779390,14781616..14781798,14790477..14790682,14795159..14795419,14809616..14809772,14815224..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14906274))
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ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 62 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020284751.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14764926..14768789,14770089..14770289,14772133..14772405,14779217..14779390,14781616..14781798,14790477..14790682,14795159..14795419,14809616..14809772,14815215..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14906274))
location: region:14764926-14906274:-1
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ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 63 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284746.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14764926..14768789,14770089..14770289,14772133..14772405,14779217..14779390,14781616..14781798,14790477..14790682,14795159..14795419,14809616..14809772,14814662..14814787,14815215..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14906274))
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ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 68 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284755.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14764926..14768789,14770098..14770289,14779217..14779390,14781616..14781798,14790477..14790682,14795159..14795419,14809616..14809772,14814662..14814787,14815215..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14906273))
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position:14906273:-1
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ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 67 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284754.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
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so has part: feature:14864843-14865009:-1:exon
so has part: feature:14861602-14861723:-1:exon
so has part: feature:14853653-14853884:-1:exon
so has part: feature:14850793-14850917:-1:exon
so has part: feature:14848290-14848461:-1:exon
so has part: feature:14828728-14828910:-1:exon
so has part: feature:14822602-14822644:-1:exon
so has part: feature:14821025-14821152:-1:exon
so has part: feature:14815215-14815496:-1:exon
so has part: feature:14814662-14814787:-1:exon
so has part: feature:14809616-14809772:-1:exon
so has part: feature:14795159-14795419:-1:exon
so has part: feature:14790477-14790682:-1:exon
so has part: feature:14781616-14781798:-1:exon
so has part: feature:14779217-14779390:-1:exon
so has part: feature:14770089-14770289:-1:exon
so has part: feature:14764926-14768789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14905891-14906273:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14901472-14901483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14884911-14885035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14880588-14880759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14871510-14871715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14867230-14867311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14866632-14866794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14864843-14865009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14861602-14861723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14853653-14853884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14850793-14850917:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14848290-14848461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14828728-14828910:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14822602-14822644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14821025-14821152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14815215-14815496:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14814662-14814787:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14809616-14809772:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14795159-14795419:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14790477-14790682:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14781616-14781798:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14779217-14779390:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14770089-14770289:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14764926-14768789:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 63 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020284753.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14764926..14768789,14770089..14770289,14772133..14772405,14779217..14779390,14790477..14790682,14795159..14795419,14809616..14809772,14814662..14814787,14815215..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14906272))
location: region:14764926-14906272:-1
so has part: feature:14905891-14906272:-1:exon
so has part: feature:14901472-14901483:-1:exon
so has part: feature:14884911-14885035:-1:exon
so has part: feature:14880588-14880759:-1:exon
so has part: feature:14871510-14871715:-1:exon
so has part: feature:14867230-14867311:-1:exon
so has part: feature:14866632-14866794:-1:exon
so has part: feature:14864843-14865009:-1:exon
so has part: feature:14861602-14861723:-1:exon
so has part: feature:14853653-14853884:-1:exon
so has part: feature:14850793-14850917:-1:exon
so has part: feature:14848290-14848461:-1:exon
so has part: feature:14828728-14828910:-1:exon
so has part: feature:14822602-14822644:-1:exon
so has part: feature:14821025-14821152:-1:exon
so has part: feature:14815215-14815496:-1:exon
so has part: feature:14814662-14814787:-1:exon
so has part: feature:14809616-14809772:-1:exon
so has part: feature:14795159-14795419:-1:exon
so has part: feature:14790477-14790682:-1:exon
so has part: feature:14779217-14779390:-1:exon
so has part: feature:14772133-14772405:-1:exon
so has part: feature:14770089-14770289:-1:exon
so has part: feature:14764926-14768789:-1:exon

position:14906272:-1
position: 14906272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14905891-14906272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14901472-14901483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14884911-14885035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14880588-14880759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14871510-14871715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14867230-14867311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14866632-14866794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14864843-14865009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14861602-14861723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14853653-14853884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14850793-14850917:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14848290-14848461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14828728-14828910:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14822602-14822644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14821025-14821152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14815215-14815496:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14814662-14814787:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14809616-14809772:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14795159-14795419:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14790477-14790682:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14779217-14779390:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14772133-14772405:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14770089-14770289:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14764926-14768789:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X5
translation: MSTDEGTYMCIAENRVGKVEATATLTVRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRYSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKSTLYTVRGLRPNTVYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDHQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGRRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPSYPWLADSWPATSLPVNNSNSGPNEIGNFSRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGNNALLYIPDYRLAEGLSNRMPHNQSQDFSTTSSHNSSERSGSLSGGKGGKKKKNKNSSKPQKNNGSTWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHMQSNNQPPQPPVPPLGYVSGALISDLETDVADDDADDEEEALEIPRPLRALDQTPGSSMDNLDSSVTGSMVNGWGSASDEDRNFSSHRSSVGSSSDGSIFANGSFAQALVAAADKAGFRLDGTSLTRTGKAFTSSQRPRPTSPFSTDSNTSAALNQSQRPRPTKKHKGGRMDQQPALPHRREGMTDDLPPPPDPPPGQGLRQQIGPSQHAGNVENSAERKGNSLERQHASNLEDTKSSLDCPARTSLEWQRQTQEWINSTERQEDIRKTPHKQGVGSEEALVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAESN
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14768781..14768789,14770183..14770289,14772133..14772405,14779217..14779390,14781616..14781798,14790477..14790682,14795159..14795419,14809616..14809772,14814662..14814787,14815215..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14905975))
location: region:14768781-14905975:-1
so has part: feature:14905891-14905975:-1:exon
so has part: feature:14901472-14901483:-1:exon
so has part: feature:14884911-14885035:-1:exon
so has part: feature:14880588-14880759:-1:exon
so has part: feature:14871510-14871715:-1:exon
so has part: feature:14867230-14867311:-1:exon
so has part: feature:14866632-14866794:-1:exon
so has part: feature:14864843-14865009:-1:exon
so has part: feature:14861602-14861723:-1:exon
so has part: feature:14853653-14853884:-1:exon
so has part: feature:14850793-14850917:-1:exon
so has part: feature:14848290-14848461:-1:exon
so has part: feature:14828728-14828910:-1:exon
so has part: feature:14822602-14822644:-1:exon
so has part: feature:14821025-14821152:-1:exon
so has part: feature:14815215-14815496:-1:exon
so has part: feature:14814662-14814787:-1:exon
so has part: feature:14809616-14809772:-1:exon
so has part: feature:14795159-14795419:-1:exon
so has part: feature:14790477-14790682:-1:exon
so has part: feature:14781616-14781798:-1:exon
so has part: feature:14779217-14779390:-1:exon
so has part: feature:14772133-14772405:-1:exon
so has part: feature:14770183-14770289:-1:exon
so has part: feature:14768781-14768789:-1:exon

XP_020140339.1
type: Protein
SIO_000068: ncbiprotein

position:14768781:-1
position: 14768781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14905975:-1
position: 14905975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14905891-14905975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14901472-14901483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14884911-14885035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14880588-14880759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14871510-14871715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14867230-14867311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14866632-14866794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14864843-14865009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14861602-14861723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14853653-14853884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14850793-14850917:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14848290-14848461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14828728-14828910:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14822602-14822644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14821025-14821152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14815215-14815496:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14814662-14814787:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14809616-14809772:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14795159-14795419:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14790477-14790682:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14781616-14781798:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14779217-14779390:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14772133-14772405:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14770183-14770289:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:14768781-14768789:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X10
translation: MSTDEGTYMCIAENRVGKVEATATLTVRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRYSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKSTLYTVRGLRPNTVYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDHQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGRRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPSYPWLADSWPATSLPVNNSNSGPNEIGNFSRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGNNALLYIPDYRLAEGLSNRMPHNQSQDFSTTSSHNSSERSGSLSGGKGGKKKKNKNSSKPQKNNGSTWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHMQSNNQPPQPPVPPLGYVSGALISDLETDVADDDADDEEEALEIPRPLRALDQTPGSSMDNLDSSVTGSMVNGWGSASDEDRNFSSHRSSVGSSSDGSIFANGSFAQALVAAADKAGFRLDGTSLTRTGKAFTSSQRPRPTSPFSTDSNTSAALNQSQRPRPTKKHKGGRMDQQPALPHRREGMTDEEALVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAEVLRGGHQRNASDLLDIGYMGSNSQGQFTE
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14768785..14768789,14770098..14770289,14779217..14779390,14781616..14781798,14790477..14790682,14795159..14795419,14809616..14809772,14814662..14814787,14815215..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14905975))
location: region:14768785-14905975:-1
so has part: feature:14905891-14905975:-1:exon
so has part: feature:14901472-14901483:-1:exon
so has part: feature:14884911-14885035:-1:exon
so has part: feature:14880588-14880759:-1:exon
so has part: feature:14871510-14871715:-1:exon
so has part: feature:14867230-14867311:-1:exon
so has part: feature:14866632-14866794:-1:exon
so has part: feature:14864843-14865009:-1:exon
so has part: feature:14861602-14861723:-1:exon
so has part: feature:14853653-14853884:-1:exon
so has part: feature:14850793-14850917:-1:exon
so has part: feature:14848290-14848461:-1:exon
so has part: feature:14828728-14828910:-1:exon
so has part: feature:14822602-14822644:-1:exon
so has part: feature:14821025-14821152:-1:exon
so has part: feature:14815215-14815496:-1:exon
so has part: feature:14814662-14814787:-1:exon
so has part: feature:14809616-14809772:-1:exon
so has part: feature:14795159-14795419:-1:exon
so has part: feature:14790477-14790682:-1:exon
so has part: feature:14781616-14781798:-1:exon
so has part: feature:14779217-14779390:-1:exon
so has part: feature:14770098-14770289:-1:exon
so has part: feature:14768785-14768789:-1:exon

XP_020140344.1
type: Protein
SIO_000068: ncbiprotein

position:14768785:-1
position: 14768785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14905891-14905975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14901472-14901483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14884911-14885035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14880588-14880759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14871510-14871715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14867230-14867311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14866632-14866794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14864843-14865009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14861602-14861723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14853653-14853884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14850793-14850917:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14848290-14848461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14828728-14828910:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14822602-14822644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14821025-14821152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14815215-14815496:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14814662-14814787:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14809616-14809772:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14795159-14795419:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14790477-14790682:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14781616-14781798:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14779217-14779390:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14770098-14770289:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14768785-14768789:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X2
translation: MSTDEGTYMCIAENRVGKVEATATLTVRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRYSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKSTLYTVRGLRPNTVYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDHQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGRRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPSYPWLADSWPATSLPVNNSNSGPNEIGNFSRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGNNALLYIPDYRLAEGLSNRMPHNQSQDFSTTSSHNSSERSGSLSGGKGGKKKKNKNSSKPQKNNGSTWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHMQSNNQPPQPPVPPLGYVSGALISDLETDVADDDADDEEEALEIPRPLRALDQTPGSSMDNLDSSVTGSMVNGWGSASDEDRNFSSHRSSVGSSSDGSIFANGSFAQALVAAADKAGFRLDGTSLTRTGKAFTSSQRPRPTSPFSTDSNTSAALNQSQRPRPTKKHKGGRMDQQPALPHRREGMTDDLPPPPDPPPGQGLRQQIGPSQHAGNVENSAERKGNSLERQHASNLEDTKSSLDCPARTSLEWQRQTQEWINSTERQEDIRKTPHKQGVGSEEALVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAEVLRGGHQRNASDLLDIGYMGSNSQGQFTE
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14768785..14768789,14770098..14770289,14772133..14772405,14779217..14779390,14781616..14781798,14790477..14790682,14795159..14795419,14809616..14809772,14814662..14814787,14815215..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14905975))
location: region:14768785-14905975:-1
so has part: feature:14905891-14905975:-1:exon
so has part: feature:14901472-14901483:-1:exon
so has part: feature:14884911-14885035:-1:exon
so has part: feature:14880588-14880759:-1:exon
so has part: feature:14871510-14871715:-1:exon
so has part: feature:14867230-14867311:-1:exon
so has part: feature:14866632-14866794:-1:exon
so has part: feature:14864843-14865009:-1:exon
so has part: feature:14861602-14861723:-1:exon
so has part: feature:14853653-14853884:-1:exon
so has part: feature:14850793-14850917:-1:exon
so has part: feature:14848290-14848461:-1:exon
so has part: feature:14828728-14828910:-1:exon
so has part: feature:14822602-14822644:-1:exon
so has part: feature:14821025-14821152:-1:exon
so has part: feature:14815215-14815496:-1:exon
so has part: feature:14814662-14814787:-1:exon
so has part: feature:14809616-14809772:-1:exon
so has part: feature:14795159-14795419:-1:exon
so has part: feature:14790477-14790682:-1:exon
so has part: feature:14781616-14781798:-1:exon
so has part: feature:14779217-14779390:-1:exon
so has part: feature:14772133-14772405:-1:exon
so has part: feature:14770098-14770289:-1:exon
so has part: feature:14768785-14768789:-1:exon

XP_020140336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14905891-14905975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14901472-14901483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14884911-14885035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14880588-14880759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14871510-14871715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14867230-14867311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14866632-14866794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14864843-14865009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14861602-14861723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14853653-14853884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14850793-14850917:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14848290-14848461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14828728-14828910:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14822602-14822644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14821025-14821152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14815215-14815496:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14814662-14814787:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14809616-14809772:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14795159-14795419:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14790477-14790682:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14781616-14781798:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14779217-14779390:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14772133-14772405:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14770098-14770289:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:14768785-14768789:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X11
translation: MLPSEKVGKITRLELLFVLMLFFSGPTLSKLTRTPWKGKPWKGGSRLRQEDFPPRIVEHPSDVIVSKGEPTTLNCKAEGRPTPTIEWYKDGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSRNASLEVALLRDDFRQNPTDVVVAAGEPAILECQPPRGHPEPTIYWKKDKVRIDDKEERISIRGGKLMISNTRKSDAGMYTCVGTNMVGERDSDPAELTVFERPTFLRRPINQVVLEEEIVEFRCQVQGDPQPTVRWKKDDADLPRGRYDIRDDYTLRIKKAMSTDEGTYMCIAENRVGKVEATATLTVRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRYSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKSTLYTVRGLRPNTVYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDHQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGRRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPSYPWLADSWPATSLPVNNSNSGPNEIGNFSRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGNNGGKGGKKKKNKNSSKPQKNNGSTWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHMQSNNQPPQPPVPPLGYVSGALISDLETDVADDDADDEEEALEIPRPLRALDQTPGSSMDNLDSSVTGSMVNGWGSASDEDRNFSSHRSSVGSSSDGSIFANGSFAQALVAAADKAGFRLDGTSLTRTGKAFTSSQRPRPTSPFSTDSNTSAALNQSQRPRPTKKHKGGRMDQQPALPHRREGMTDEEALVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAEVLRGGHQRNASDLLDIGYMGSNSQGQFTGEL
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14768788..14768789,14770089..14770289,14779217..14779390,14781616..14781798,14790477..14790682,14795159..14795419,14809616..14809772,14815215..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14906018,14943865..14944003,14962284..14962404,14965825..14965982,15320547..15320873,16113735..16113864))
location: region:14768788-16113864:-1
so has part: feature:16113735-16113864:-1:exon
so has part: feature:15320547-15320873:-1:exon
so has part: feature:14965825-14965982:-1:exon
so has part: feature:14962284-14962404:-1:exon
so has part: feature:14943865-14944003:-1:exon
so has part: feature:14905891-14906018:-1:exon
so has part: feature:14901472-14901483:-1:exon
so has part: feature:14884911-14885035:-1:exon
so has part: feature:14880588-14880759:-1:exon
so has part: feature:14871510-14871715:-1:exon
so has part: feature:14867230-14867311:-1:exon
so has part: feature:14866632-14866794:-1:exon
so has part: feature:14864843-14865009:-1:exon
so has part: feature:14861602-14861723:-1:exon
so has part: feature:14853653-14853884:-1:exon
so has part: feature:14850793-14850917:-1:exon
so has part: feature:14848290-14848461:-1:exon
so has part: feature:14828728-14828910:-1:exon
so has part: feature:14822602-14822644:-1:exon
so has part: feature:14821025-14821152:-1:exon
so has part: feature:14815215-14815496:-1:exon
so has part: feature:14809616-14809772:-1:exon
so has part: feature:14795159-14795419:-1:exon
so has part: feature:14790477-14790682:-1:exon
so has part: feature:14781616-14781798:-1:exon
so has part: feature:14779217-14779390:-1:exon
so has part: feature:14770089-14770289:-1:exon
so has part: feature:14768788-14768789:-1:exon

XP_020140345.1
type: Protein
SIO_000068: ncbiprotein

position:14768788:-1
position: 14768788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16113864:-1
position: 16113864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16113735-16113864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15320547-15320873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14965825-14965982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14962284-14962404:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14943865-14944003:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14905891-14906018:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14901472-14901483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14884911-14885035:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14880588-14880759:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14871510-14871715:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14867230-14867311:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14866632-14866794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14864843-14865009:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14861602-14861723:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14853653-14853884:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14850793-14850917:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14848290-14848461:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14828728-14828910:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14822602-14822644:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14821025-14821152:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14815215-14815496:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14809616-14809772:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14795159-14795419:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14790477-14790682:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:14781616-14781798:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:14779217-14779390:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:14770089-14770289:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:14768788-14768789:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X4
translation: MSTDEGTYMCIAENRVGKVEATATLTVRAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRYSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKSTLYTVRGLRPNTVYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDHQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGRRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPSYPWLADSWPATSLPVNNSNSGPNEIGNFSRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGNNALLYIPDYRLAEGLSNRMPHNQSQDFSTTSSHNSSERSGSLSGGKGGKKKKNKNSSKPQKNNGSTWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHMQSNNQPPQPPVPPLGYVSGALISDLETDVADDDADDEEEALEIPRPLRALDQTPGSSMDNLDSSVTGSMVNGWGSASDEDRNFSSHRSSVGSSSDGSIFANGSFAQALVAAADKAGFRLDGTSLTRTGKAFTSSQRPRPTSPFSTDSNTSAALNQSQRPRPTKKHKGGRMDQQPALPHRREGMTDDLPPPPDPPPGQGLRQQIGPSQHAGNVENSAERKGNSLERQHASNLEDTKSSLDCPARTSLEWQRQTQEWINSTERQEDIRKTPHKQGVGSEEALVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAEVLRGGHQRNASDLLDIGYMGSNSQGQFTGEL
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14768788..14768789,14770089..14770289,14772133..14772405,14779217..14779390,14781616..14781798,14790477..14790682,14795159..14795419,14809616..14809772,14814662..14814787,14815215..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14905891..14905975))
location: region:14768788-14905975:-1
so has part: feature:14905891-14905975:-1:exon
so has part: feature:14884911-14885035:-1:exon
so has part: feature:14880588-14880759:-1:exon
so has part: feature:14871510-14871715:-1:exon
so has part: feature:14867230-14867311:-1:exon
so has part: feature:14866632-14866794:-1:exon
so has part: feature:14864843-14865009:-1:exon
so has part: feature:14861602-14861723:-1:exon
so has part: feature:14853653-14853884:-1:exon
so has part: feature:14850793-14850917:-1:exon
so has part: feature:14848290-14848461:-1:exon
so has part: feature:14828728-14828910:-1:exon
so has part: feature:14822602-14822644:-1:exon
so has part: feature:14821025-14821152:-1:exon
so has part: feature:14815215-14815496:-1:exon
so has part: feature:14814662-14814787:-1:exon
so has part: feature:14809616-14809772:-1:exon
so has part: feature:14795159-14795419:-1:exon
so has part: feature:14790477-14790682:-1:exon
so has part: feature:14781616-14781798:-1:exon
so has part: feature:14779217-14779390:-1:exon
so has part: feature:14772133-14772405:-1:exon
so has part: feature:14770089-14770289:-1:exon
so has part: feature:14768788-14768789:-1:exon

XP_020140338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14905891-14905975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14884911-14885035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14880588-14880759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14871510-14871715:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14867230-14867311:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14866632-14866794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14864843-14865009:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14861602-14861723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14853653-14853884:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14850793-14850917:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14848290-14848461:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14828728-14828910:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14822602-14822644:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14821025-14821152:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14815215-14815496:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14814662-14814787:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14809616-14809772:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14795159-14795419:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14790477-14790682:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14781616-14781798:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14779217-14779390:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14772133-14772405:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14770089-14770289:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14768788-14768789:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X7
translation: MSTDEGTYMCIAENRVGKVEATATLTVRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRYSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKSTLYTVRGLRPNTVYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDHQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGRRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPSYPWLADSWPATSLPVNNSNSGPNEIGNFSRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGGKGGKKKKNKNSSKPQKNNGSTWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHMQSNNQPPQPPVPPLGYVSGALISDLETDVADDDADDEEEALEIPRPLRALDQTPGSSMDNLDSSVTGSMVNGWGSASDEDRNFSSHRSSVGSSSDGSIFANGSFAQALVAAADKAGFRLDGTSLTRTGKAFTSSQRPRPTSPFSTDSNTSAALNQSQRPRPTKKHKGGRMDQQPALPHRREGMTDDLPPPPDPPPGQGLRQQIGPSQHAGNVENSAERKGNSLERQHASNLEDTKSSLDCPARTSLEWQRQTQEWINSTERQEDIRKTPHKQGVGSEEALVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAEVLRGGHQRNASDLLDIGYMGSNSQGQFTGEL
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14768788..14768789,14770089..14770289,14772133..14772405,14779217..14779390,14781616..14781798,14790477..14790682,14795159..14795419,14809616..14809772,14815224..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14905975))
location: region:14768788-14905975:-1
so has part: feature:14905891-14905975:-1:exon
so has part: feature:14901472-14901483:-1:exon
so has part: feature:14884911-14885035:-1:exon
so has part: feature:14880588-14880759:-1:exon
so has part: feature:14871510-14871715:-1:exon
so has part: feature:14867230-14867311:-1:exon
so has part: feature:14866632-14866794:-1:exon
so has part: feature:14864843-14865009:-1:exon
so has part: feature:14861602-14861723:-1:exon
so has part: feature:14853653-14853884:-1:exon
so has part: feature:14850793-14850917:-1:exon
so has part: feature:14848290-14848461:-1:exon
so has part: feature:14828728-14828910:-1:exon
so has part: feature:14822602-14822644:-1:exon
so has part: feature:14821025-14821152:-1:exon
so has part: feature:14815224-14815496:-1:exon
so has part: feature:14809616-14809772:-1:exon
so has part: feature:14795159-14795419:-1:exon
so has part: feature:14790477-14790682:-1:exon
so has part: feature:14781616-14781798:-1:exon
so has part: feature:14779217-14779390:-1:exon
so has part: feature:14772133-14772405:-1:exon
so has part: feature:14770089-14770289:-1:exon
so has part: feature:14768788-14768789:-1:exon

XP_020140341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14905891-14905975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14901472-14901483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14884911-14885035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14880588-14880759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14871510-14871715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14867230-14867311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14866632-14866794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14864843-14865009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14861602-14861723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14853653-14853884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14850793-14850917:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14848290-14848461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14828728-14828910:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14822602-14822644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14821025-14821152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14815224-14815496:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14809616-14809772:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14795159-14795419:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14790477-14790682:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14781616-14781798:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14779217-14779390:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14772133-14772405:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14770089-14770289:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14768788-14768789:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X3
translation: MSTDEGTYMCIAENRVGKVEATATLTVRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRYSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKSTLYTVRGLRPNTVYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDHQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGRRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPSYPWLADSWPATSLPVNNSNSGPNEIGNFSRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKALLYIPDYRLAEGLSNRMPHNQSQDFSTTSSHNSSERSGSLSGGKGGKKKKNKNSSKPQKNNGSTWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHMQSNNQPPQPPVPPLGYVSGALISDLETDVADDDADDEEEALEIPRPLRALDQTPGSSMDNLDSSVTGSMVNGWGSASDEDRNFSSHRSSVGSSSDGSIFANGSFAQALVAAADKAGFRLDGTSLTRTGKAFTSSQRPRPTSPFSTDSNTSAALNQSQRPRPTKKHKGGRMDQQPALPHRREGMTDDLPPPPDPPPGQGLRQQIGPSQHAGNVENSAERKGNSLERQHASNLEDTKSSLDCPARTSLEWQRQTQEWINSTERQEDIRKTPHKQGVGSEEALVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAEVLRGGHQRNASDLLDIGYMGSNSQGQFTGEL
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14768788..14768789,14770089..14770289,14772133..14772405,14779217..14779390,14781616..14781798,14790477..14790682,14795159..14795419,14809616..14809772,14814662..14814787,14815224..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14905975))
location: region:14768788-14905975:-1
so has part: feature:14905891-14905975:-1:exon
so has part: feature:14901472-14901483:-1:exon
so has part: feature:14884911-14885035:-1:exon
so has part: feature:14880588-14880759:-1:exon
so has part: feature:14871510-14871715:-1:exon
so has part: feature:14867230-14867311:-1:exon
so has part: feature:14866632-14866794:-1:exon
so has part: feature:14864843-14865009:-1:exon
so has part: feature:14861602-14861723:-1:exon
so has part: feature:14853653-14853884:-1:exon
so has part: feature:14850793-14850917:-1:exon
so has part: feature:14848290-14848461:-1:exon
so has part: feature:14828728-14828910:-1:exon
so has part: feature:14822602-14822644:-1:exon
so has part: feature:14821025-14821152:-1:exon
so has part: feature:14815224-14815496:-1:exon
so has part: feature:14814662-14814787:-1:exon
so has part: feature:14809616-14809772:-1:exon
so has part: feature:14795159-14795419:-1:exon
so has part: feature:14790477-14790682:-1:exon
so has part: feature:14781616-14781798:-1:exon
so has part: feature:14779217-14779390:-1:exon
so has part: feature:14772133-14772405:-1:exon
so has part: feature:14770089-14770289:-1:exon
so has part: feature:14768788-14768789:-1:exon

XP_020140337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14905891-14905975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14901472-14901483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14884911-14885035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14880588-14880759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14871510-14871715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14867230-14867311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14866632-14866794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14864843-14865009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14861602-14861723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14853653-14853884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14850793-14850917:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14848290-14848461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14828728-14828910:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14822602-14822644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14821025-14821152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14815224-14815496:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14814662-14814787:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14809616-14809772:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14795159-14795419:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14790477-14790682:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14781616-14781798:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14779217-14779390:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14772133-14772405:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14770089-14770289:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:14768788-14768789:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X6
translation: MSTDEGTYMCIAENRVGKVEATATLTVRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRYSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKSTLYTVRGLRPNTVYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDHQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGRRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPSYPWLADSWPATSLPVNNSNSGPNEIGNFSRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGNNGGKGGKKKKNKNSSKPQKNNGSTWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHMQSNNQPPQPPVPPLGYVSGALISDLETDVADDDADDEEEALEIPRPLRALDQTPGSSMDNLDSSVTGSMVNGWGSASDEDRNFSSHRSSVGSSSDGSIFANGSFAQALVAAADKAGFRLDGTSLTRTGKAFTSSQRPRPTSPFSTDSNTSAALNQSQRPRPTKKHKGGRMDQQPALPHRREGMTDDLPPPPDPPPGQGLRQQIGPSQHAGNVENSAERKGNSLERQHASNLEDTKSSLDCPARTSLEWQRQTQEWINSTERQEDIRKTPHKQGVGSEEALVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAEVLRGGHQRNASDLLDIGYMGSNSQGQFTGEL
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14768788..14768789,14770089..14770289,14772133..14772405,14779217..14779390,14781616..14781798,14790477..14790682,14795159..14795419,14809616..14809772,14815215..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14905975))
location: region:14768788-14905975:-1
so has part: feature:14905891-14905975:-1:exon
so has part: feature:14901472-14901483:-1:exon
so has part: feature:14884911-14885035:-1:exon
so has part: feature:14880588-14880759:-1:exon
so has part: feature:14871510-14871715:-1:exon
so has part: feature:14867230-14867311:-1:exon
so has part: feature:14866632-14866794:-1:exon
so has part: feature:14864843-14865009:-1:exon
so has part: feature:14861602-14861723:-1:exon
so has part: feature:14853653-14853884:-1:exon
so has part: feature:14850793-14850917:-1:exon
so has part: feature:14848290-14848461:-1:exon
so has part: feature:14828728-14828910:-1:exon
so has part: feature:14822602-14822644:-1:exon
so has part: feature:14821025-14821152:-1:exon
so has part: feature:14815215-14815496:-1:exon
so has part: feature:14809616-14809772:-1:exon
so has part: feature:14795159-14795419:-1:exon
so has part: feature:14790477-14790682:-1:exon
so has part: feature:14781616-14781798:-1:exon
so has part: feature:14779217-14779390:-1:exon
so has part: feature:14772133-14772405:-1:exon
so has part: feature:14770089-14770289:-1:exon
so has part: feature:14768788-14768789:-1:exon

XP_020140340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14905891-14905975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14901472-14901483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14884911-14885035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14880588-14880759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14871510-14871715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14867230-14867311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14866632-14866794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14864843-14865009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14861602-14861723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14853653-14853884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14850793-14850917:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14848290-14848461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14828728-14828910:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14822602-14822644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14821025-14821152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14815215-14815496:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14809616-14809772:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14795159-14795419:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14790477-14790682:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14781616-14781798:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14779217-14779390:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14772133-14772405:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14770089-14770289:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14768788-14768789:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X8
translation: MSTDEGTYMCIAENRVGKVEATATLTVRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRYSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKSTLYTVRGLRPNTVYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDHQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGRRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPSYPWLADSWPATSLPVNNSNSGPNEIGNFSRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGNNALLYIPDYRLAEGLSNRMPHNQSQDFSTTSSHNSSERSGSLSGGKGGKKKKNKNSSKPQKNNGSTWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHMQSNNQPPQPPVPPLGYVSGALISDLETDVADDDADDEEEALEIPRPLRALDQTPGSSMDNLDSSVTGKAFTSSQRPRPTSPFSTDSNTSAALNQSQRPRPTKKHKGGRMDQQPALPHRREGMTDDLPPPPDPPPGQGLRQQIGPSQHAGNVENSAERKGNSLERQHASNLEDTKSSLDCPARTSLEWQRQTQEWINSTERQEDIRKTPHKQGVGSEEALVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAEVLRGGHQRNASDLLDIGYMGSNSQGQFTGEL
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14768788..14768789,14770089..14770289,14772133..14772405,14779217..14779390,14790477..14790682,14795159..14795419,14809616..14809772,14814662..14814787,14815215..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14905975))
location: region:14768788-14905975:-1
so has part: feature:14905891-14905975:-1:exon
so has part: feature:14901472-14901483:-1:exon
so has part: feature:14884911-14885035:-1:exon
so has part: feature:14880588-14880759:-1:exon
so has part: feature:14871510-14871715:-1:exon
so has part: feature:14867230-14867311:-1:exon
so has part: feature:14866632-14866794:-1:exon
so has part: feature:14864843-14865009:-1:exon
so has part: feature:14861602-14861723:-1:exon
so has part: feature:14853653-14853884:-1:exon
so has part: feature:14850793-14850917:-1:exon
so has part: feature:14848290-14848461:-1:exon
so has part: feature:14828728-14828910:-1:exon
so has part: feature:14822602-14822644:-1:exon
so has part: feature:14821025-14821152:-1:exon
so has part: feature:14815215-14815496:-1:exon
so has part: feature:14814662-14814787:-1:exon
so has part: feature:14809616-14809772:-1:exon
so has part: feature:14795159-14795419:-1:exon
so has part: feature:14790477-14790682:-1:exon
so has part: feature:14779217-14779390:-1:exon
so has part: feature:14772133-14772405:-1:exon
so has part: feature:14770089-14770289:-1:exon
so has part: feature:14768788-14768789:-1:exon

XP_020140342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14905891-14905975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14901472-14901483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14884911-14885035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14880588-14880759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14871510-14871715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14867230-14867311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14866632-14866794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14864843-14865009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14861602-14861723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14853653-14853884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14850793-14850917:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14848290-14848461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14828728-14828910:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14822602-14822644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14821025-14821152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14815215-14815496:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14814662-14814787:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14809616-14809772:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14795159-14795419:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14790477-14790682:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14779217-14779390:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14772133-14772405:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14770089-14770289:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14768788-14768789:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X9
translation: MSTDEGTYMCIAENRVGKVEATATLTVRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRYSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKSTLYTVRGLRPNTVYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDHQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGRRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPSYPWLADSWPATSLPVNNSNSGPNEIGNFSRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGNNALLYIPDYRLAEGLSNRMPHNQSQDFSTTSSHNSSERSGSLSGGKGGKKKKNKNSSKPQKNNGSTWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHMQSNNQPPQPPVPPLGYVSGALISDLETDVADDDADDEEEALEIPRPLRALDQTPGSSMDNLDSSVTGSMVNGWGSASDEDRNFSSHRSSVGSSSDGSIFANGSFAQALVAAADKAGFRLDGTSLTRTGKAFTSSQRPRPTSPFSTDSNTSAALNQSQRPRPTKKHKGGRMDQQPALPHRREGMTDEEALVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAEVLRGGHQRNASDLLDIGYMGSNSQGQFTGEL
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14768788..14768789,14770089..14770289,14779217..14779390,14781616..14781798,14790477..14790682,14795159..14795419,14809616..14809772,14814662..14814787,14815215..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14905975))
location: region:14768788-14905975:-1
so has part: feature:14905891-14905975:-1:exon
so has part: feature:14901472-14901483:-1:exon
so has part: feature:14884911-14885035:-1:exon
so has part: feature:14880588-14880759:-1:exon
so has part: feature:14871510-14871715:-1:exon
so has part: feature:14867230-14867311:-1:exon
so has part: feature:14866632-14866794:-1:exon
so has part: feature:14864843-14865009:-1:exon
so has part: feature:14861602-14861723:-1:exon
so has part: feature:14853653-14853884:-1:exon
so has part: feature:14850793-14850917:-1:exon
so has part: feature:14848290-14848461:-1:exon
so has part: feature:14828728-14828910:-1:exon
so has part: feature:14822602-14822644:-1:exon
so has part: feature:14821025-14821152:-1:exon
so has part: feature:14815215-14815496:-1:exon
so has part: feature:14814662-14814787:-1:exon
so has part: feature:14809616-14809772:-1:exon
so has part: feature:14795159-14795419:-1:exon
so has part: feature:14790477-14790682:-1:exon
so has part: feature:14781616-14781798:-1:exon
so has part: feature:14779217-14779390:-1:exon
so has part: feature:14770089-14770289:-1:exon
so has part: feature:14768788-14768789:-1:exon

XP_020140343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14905891-14905975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14901472-14901483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14884911-14885035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14880588-14880759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14871510-14871715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14867230-14867311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14866632-14866794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14864843-14865009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14861602-14861723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14853653-14853884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14850793-14850917:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14848290-14848461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14828728-14828910:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14822602-14822644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14821025-14821152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14815215-14815496:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14814662-14814787:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14809616-14809772:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14795159-14795419:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14790477-14790682:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14781616-14781798:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14779217-14779390:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14770089-14770289:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14768788-14768789:-1:exon

ROBO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ROBO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2 isoform X1
translation: MSTDEGTYMCIAENRVGKVEATATLTVRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRYSVSPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFLGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKSTLYTVRGLRPNTVYLFMVRAINPQGLSDPSPMSDPVRTQDISPPAQGVDHRQVQKELGDVIVRLHTPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPPDHQNGIIQEYKIWCLGNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGRRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAVTFQRGDGGLMSNGSRPGLLNAGDPSYPWLADSWPATSLPVNNSNSGPNEIGNFSRGDVLPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGNNALLYIPDYRLAEGLSNRMPHNQSQDFSTTSSHNSSERSGSLSGGKGGKKKKNKNSSKPQKNNGSTWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLPVQTYLHQGMEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHMQSNNQPPQPPVPPLGYVSGALISDLETDVADDDADDEEEALEIPRPLRALDQTPGSSMDNLDSSVTGSMVNGWGSASDEDRNFSSHRSSVGSSSDGSIFANGSFAQALVAAADKAGFRLDGTSLTRTGKAFTSSQRPRPTSPFSTDSNTSAALNQSQRPRPTKKHKGGRMDQQPALPHRREGMTDDLPPPPDPPPGQGLRQQIGPSQHAGNVENSAERKGNSLERQHASNLEDTKSSLDCPARTSLEWQRQTQEWINSTERQEDIRKTPHKQGVGSEEALVPYSKPSFPSPGGHSSSGTASSKGSTGPRKAEVLRGGHQRNASDLLDIGYMGSNSQGQFTGEL
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(14768788..14768789,14770089..14770289,14772133..14772405,14779217..14779390,14781616..14781798,14790477..14790682,14795159..14795419,14809616..14809772,14814662..14814787,14815215..14815496,14821025..14821152,14822602..14822644,14828728..14828910,14848290..14848461,14850793..14850917,14853653..14853884,14861602..14861723,14864843..14865009,14866632..14866794,14867230..14867311,14871510..14871715,14880588..14880759,14884911..14885035,14901472..14901483,14905891..14905975))
location: region:14768788-14905975:-1
so has part: feature:14905891-14905975:-1:exon
so has part: feature:14901472-14901483:-1:exon
so has part: feature:14884911-14885035:-1:exon
so has part: feature:14880588-14880759:-1:exon
so has part: feature:14871510-14871715:-1:exon
so has part: feature:14867230-14867311:-1:exon
so has part: feature:14866632-14866794:-1:exon
so has part: feature:14864843-14865009:-1:exon
so has part: feature:14861602-14861723:-1:exon
so has part: feature:14853653-14853884:-1:exon
so has part: feature:14850793-14850917:-1:exon
so has part: feature:14848290-14848461:-1:exon
so has part: feature:14828728-14828910:-1:exon
so has part: feature:14822602-14822644:-1:exon
so has part: feature:14821025-14821152:-1:exon
so has part: feature:14815215-14815496:-1:exon
so has part: feature:14814662-14814787:-1:exon
so has part: feature:14809616-14809772:-1:exon
so has part: feature:14795159-14795419:-1:exon
so has part: feature:14790477-14790682:-1:exon
so has part: feature:14781616-14781798:-1:exon
so has part: feature:14779217-14779390:-1:exon
so has part: feature:14772133-14772405:-1:exon
so has part: feature:14770089-14770289:-1:exon
so has part: feature:14768788-14768789:-1:exon

XP_020140335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14905891-14905975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14901472-14901483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14884911-14885035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14880588-14880759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14871510-14871715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14867230-14867311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14866632-14866794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14864843-14865009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14861602-14861723:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14853653-14853884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14850793-14850917:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14848290-14848461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14828728-14828910:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14822602-14822644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14821025-14821152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14815215-14815496:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14814662-14814787:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14809616-14809772:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14795159-14795419:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14790477-14790682:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14781616-14781798:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14779217-14779390:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14772133-14772405:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14770089-14770289:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:14768788-14768789:-1:exon

LOC105855905
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105855905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 15536234..15542771
location: region:15536234-15542771:1
so has part: feature:15536234-15542771:1:exon

105855905
type: Gene
SIO_000068: ncbigene

position:15536234:1
position: 15536234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15542771:1
position: 15542771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15536234-15542771:1:exon

LOC105855905
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105855905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105855905
subclass of: SO_0000673
so part of: LOC105855905
location: 15536234..15542771
location: region:15536234-15542771:1
so has part: feature:15536234-15542771:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15536234-15542771:1:exon

LOC105883114
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105883114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16304825..16406629
location: region:16304825-16406629:1
so has part: feature:16304825-16406629:1:exon
subclass of: SO_0000011

105883114
type: Gene
SIO_000068: ncbigene

position:16304825:1
position: 16304825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16406629:1
position: 16406629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16304825-16406629:1:exon

LOC105883114
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105883114
product: uncharacterized LOC105883114, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222920.1
SIO_010081: LOC105883114
subclass of: SO_0000673
so part of: LOC105883114
location: join(16304825..16305141,16374550..16374581,16375330..16375392,16406474..16406629)
location: region:16304825-16406629:1
so has part: feature:16304825-16305141:1:exon
so has part: feature:16374550-16374581:1:exon
so has part: feature:16375330-16375392:1:exon
so has part: feature:16406474-16406629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16304825-16305141:1:exon

position:16305141:1
position: 16305141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16374550-16374581:1:exon

position:16374550:1
position: 16374550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16374581:1
position: 16374581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16375330-16375392:1:exon

position:16375330:1
position: 16375330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16375392:1
position: 16375392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16406474-16406629:1:exon

position:16406474:1
position: 16406474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105883114
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105883114
product: uncharacterized LOC105883114, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159642.2
SIO_010081: LOC105883114
subclass of: SO_0000673
so part of: LOC105883114
location: join(16304825..16305141,16374550..16374581,16375330..16376988)
location: region:16304825-16376988:1
so has part: feature:16304825-16305141:1:exon
so has part: feature:16374550-16374581:1:exon
so has part: feature:16375330-16376988:1:exon

position:16376988:1
position: 16376988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16304825-16305141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16374550-16374581:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16375330-16376988:1:exon

LIPI
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LIPI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16562178..16621469)
location: region:16562178-16621469:-1
so has part: feature:16562178-16621469:-1:exon
subclass of: SO_0000010

105883098
type: Gene
SIO_000068: ncbigene

position:16562178:-1
position: 16562178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16621469:-1
position: 16621469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16562178-16621469:-1:exon

LIPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LIPI
product: lipase I, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012785987.1
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(16562178..16562443,16575336..16575512,16580429..16580540,16593553..16593657,16595385..16595552,16601950..16602051,16604936..16605044,16606666..16607051,16621383..16621469))
location: region:16562178-16621469:-1
so has part: feature:16621383-16621469:-1:exon
so has part: feature:16606666-16607051:-1:exon
so has part: feature:16604936-16605044:-1:exon
so has part: feature:16601950-16602051:-1:exon
so has part: feature:16595385-16595552:-1:exon
so has part: feature:16593553-16593657:-1:exon
so has part: feature:16580429-16580540:-1:exon
so has part: feature:16575336-16575512:-1:exon
so has part: feature:16562178-16562443:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16621383-16621469:-1:exon

position:16621383:-1
position: 16621383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16606666-16607051:-1:exon

position:16606666:-1
position: 16606666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16607051:-1
position: 16607051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16604936-16605044:-1:exon

position:16604936:-1
position: 16604936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16605044:-1
position: 16605044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16601950-16602051:-1:exon

position:16601950:-1
position: 16601950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16602051:-1
position: 16602051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16595385-16595552:-1:exon

position:16595385:-1
position: 16595385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16595552:-1
position: 16595552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16593553-16593657:-1:exon

position:16593553:-1
position: 16593553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16593657:-1
position: 16593657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:16580429-16580540:-1:exon

position:16580429:-1
position: 16580429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16580540:-1
position: 16580540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:16575336-16575512:-1:exon

position:16575336:-1
position: 16575336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16575512:-1
position: 16575512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:16562178-16562443:-1:exon

position:16562443:-1
position: 16562443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LIPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LIPI
product: lipase I, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012785985.1
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(16562178..16562443,16575336..16575512,16580429..16580540,16593571..16593657,16595385..16595552,16596460..16596549,16601950..16602051,16604936..16605044,16606666..16607051,16621383..16621469))
location: region:16562178-16621469:-1
so has part: feature:16621383-16621469:-1:exon
so has part: feature:16606666-16607051:-1:exon
so has part: feature:16604936-16605044:-1:exon
so has part: feature:16601950-16602051:-1:exon
so has part: feature:16596460-16596549:-1:exon
so has part: feature:16595385-16595552:-1:exon
so has part: feature:16593571-16593657:-1:exon
so has part: feature:16580429-16580540:-1:exon
so has part: feature:16575336-16575512:-1:exon
so has part: feature:16562178-16562443:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16621383-16621469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16606666-16607051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16604936-16605044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16601950-16602051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16596460-16596549:-1:exon

position:16596460:-1
position: 16596460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16596549:-1
position: 16596549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16595385-16595552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16593571-16593657:-1:exon

position:16593571:-1
position: 16593571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:16580429-16580540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16575336-16575512:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16562178-16562443:-1:exon

LIPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LIPI
product: lipase I, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012785984.1
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(16562178..16562443,16575336..16575512,16580429..16580540,16593553..16593657,16595385..16595552,16596460..16596549,16601950..16602051,16604936..16605044,16606666..16607051,16621383..16621469))
location: region:16562178-16621469:-1
so has part: feature:16621383-16621469:-1:exon
so has part: feature:16606666-16607051:-1:exon
so has part: feature:16604936-16605044:-1:exon
so has part: feature:16601950-16602051:-1:exon
so has part: feature:16596460-16596549:-1:exon
so has part: feature:16595385-16595552:-1:exon
so has part: feature:16593553-16593657:-1:exon
so has part: feature:16580429-16580540:-1:exon
so has part: feature:16575336-16575512:-1:exon
so has part: feature:16562178-16562443:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16621383-16621469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16606666-16607051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16604936-16605044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16601950-16602051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16596460-16596549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16595385-16595552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16593553-16593657:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16580429-16580540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16575336-16575512:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16562178-16562443:-1:exon

LIPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LIPI
product: lipase I, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 47% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012785988.1
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(16562251..16562443,16575336..16575512,16580429..16580540,16593553..16593657,16595385..16595447,16596460..16596549,16601950..16602051,16604936..16605044,16606666..16607051,16621383..16621469))
location: region:16562251-16621469:-1
so has part: feature:16621383-16621469:-1:exon
so has part: feature:16606666-16607051:-1:exon
so has part: feature:16604936-16605044:-1:exon
so has part: feature:16601950-16602051:-1:exon
so has part: feature:16596460-16596549:-1:exon
so has part: feature:16595385-16595447:-1:exon
so has part: feature:16593553-16593657:-1:exon
so has part: feature:16580429-16580540:-1:exon
so has part: feature:16575336-16575512:-1:exon
so has part: feature:16562251-16562443:-1:exon

position:16562251:-1
position: 16562251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16621383-16621469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16606666-16607051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16604936-16605044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16601950-16602051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16596460-16596549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16595385-16595447:-1:exon

position:16595447:-1
position: 16595447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:16593553-16593657:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16580429-16580540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16575336-16575512:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16562251-16562443:-1:exon

LIPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LIPI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member I isoform X3
translation: MRVYIFLCLMCWVRSDNKRPCLEFSQLNVKDSFKDLFNPRIEIILMVYTRNNLNCAEPLFDQNNSLNINFNTQKKTVWLIHGYRPMGSTPSWLRNFLRILLNEEDVNIIVVDWNRGATTFIYNRAVKNTRKVAENLSRHIKNLLKHGASLDNFHFIGVSLGAHISGFVGKTFHGQLGRITGLDPAGPKFSGKPSYSRLDYTDAKFVDVIHSDSNGIEYIKCDHQRAVYLFMASLETHCNFISFPCHSYKDYKTSLCVDCDRFNEKSCPWLGYQAELLKGVLKERMQEGTLRTTVFLDTSGRYPFCTYYFVLSIIVLDETMKYGYISFKLLNQFGMTEEPKLYKRNQPFYKLQEVKILAQFLNDVVNISSIGLTYFQSSNLQCSTCQYRIRSLMLKSLTYPERPPLCRYNIALKENEEVFLNLDTCIPKKT
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(16562356..16562443,16575336..16575512,16580429..16580540,16593553..16593657,16595385..16595552,16601950..16602051,16604936..16605044,16606666..16607051,16621383..16621428))
location: region:16562356-16621428:-1
so has part: feature:16621383-16621428:-1:exon
so has part: feature:16606666-16607051:-1:exon
so has part: feature:16604936-16605044:-1:exon
so has part: feature:16601950-16602051:-1:exon
so has part: feature:16595385-16595552:-1:exon
so has part: feature:16593553-16593657:-1:exon
so has part: feature:16580429-16580540:-1:exon
so has part: feature:16575336-16575512:-1:exon
so has part: feature:16562356-16562443:-1:exon

XP_012641441.1
type: Protein
SIO_000068: ncbiprotein

position:16562356:-1
position: 16562356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16621428:-1
position: 16621428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16621383-16621428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16606666-16607051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16604936-16605044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16601950-16602051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16595385-16595552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16593553-16593657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16580429-16580540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16575336-16575512:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16562356-16562443:-1:exon

LIPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LIPI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member I isoform X4
translation: MRVYIFLCLMCWVRSDNKRPCLEFSQLNVKDSFKDLFNPRIEIILMVYTRNNLNCAEPLFDQNNSLNINFNTQKKTVWLIHGYRPMGSTPSWLRNFLRILLNEEDVNIIVVDWNRGATTFIYNRAVKNTRKVAENLSRHIKNLLKHGASLDNFHFIGVSLGAHISGFVGKTFHGQLGRITGLDPAGPKFSGKPSYSRLDYTDAKFVDVIHSDSNGLGIKEPLGHIDFYPNGGTKQPGCPKSIFSDYKTSLCVDCDRFNEKSCPWLGYQAELLKGVLKERMQEGTLRTTVFLDTSGRYPFCTYYFVLSIIVLDETMKYGYISFKLLNQFGMTEEPKLYKRNQPFYKLQEVKILAQFLNDVVNISSIGLTYFQSSNLQCSTCQYRIRSLMLKSLTYPERPPLCRYNIALKENEEVFLNLDTCIPKKT
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(16562356..16562443,16575336..16575512,16580429..16580540,16593553..16593657,16595385..16595447,16596460..16596549,16601950..16602051,16604936..16605044,16606666..16607051,16621383..16621428))
location: region:16562356-16621428:-1
so has part: feature:16621383-16621428:-1:exon
so has part: feature:16606666-16607051:-1:exon
so has part: feature:16604936-16605044:-1:exon
so has part: feature:16601950-16602051:-1:exon
so has part: feature:16596460-16596549:-1:exon
so has part: feature:16595385-16595447:-1:exon
so has part: feature:16593553-16593657:-1:exon
so has part: feature:16580429-16580540:-1:exon
so has part: feature:16575336-16575512:-1:exon
so has part: feature:16562356-16562443:-1:exon

XP_012641442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16621383-16621428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16606666-16607051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16604936-16605044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16601950-16602051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16596460-16596549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16595385-16595447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16593553-16593657:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16580429-16580540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16575336-16575512:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16562356-16562443:-1:exon

LIPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LIPI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member I isoform X2
translation: MRVYIFLCLMCWVRSDNKRPCLEFSQLNVKDSFKDLFNPRIEIILMVYTRNNLNCAEPLFDQNNSLNINFNTQKKTVWLIHGYRPMGSTPSWLRNFLRILLNEEDVNIIVVDWNRGATTFIYNRAVKNTRKVAENLSRHIKNLLKHGASLDNFHFIGVSLGAHISGFVGKTFHGQLGRITGLDPAGPKFSGKPSYSRLDYTDAKFVDVIHSDSNGLGIKEPLGHIDFYPNGGTKQPGCPKSIFSGIEYIKCDHQRAVYLFMASLETHCNFISFPCHSYKDYKTSLCVDCDRFNEKSCPWLGYQAELLKGVLKERMQEGTLRTTVFLDTSAYYFVLSIIVLDETMKYGYISFKLLNQFGMTEEPKLYKRNQPFYKLQEVKILAQFLNDVVNISSIGLTYFQSSNLQCSTCQYRIRSLMLKSLTYPERPPLCRYNIALKENEEVFLNLDTCIPKKT
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(16562356..16562443,16575336..16575512,16580429..16580540,16593571..16593657,16595385..16595552,16596460..16596549,16601950..16602051,16604936..16605044,16606666..16607051,16621383..16621428))
location: region:16562356-16621428:-1
so has part: feature:16621383-16621428:-1:exon
so has part: feature:16606666-16607051:-1:exon
so has part: feature:16604936-16605044:-1:exon
so has part: feature:16601950-16602051:-1:exon
so has part: feature:16596460-16596549:-1:exon
so has part: feature:16595385-16595552:-1:exon
so has part: feature:16593571-16593657:-1:exon
so has part: feature:16580429-16580540:-1:exon
so has part: feature:16575336-16575512:-1:exon
so has part: feature:16562356-16562443:-1:exon

XP_012641439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16621383-16621428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16606666-16607051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16604936-16605044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16601950-16602051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16596460-16596549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16595385-16595552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16593571-16593657:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16580429-16580540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16575336-16575512:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16562356-16562443:-1:exon

LIPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LIPI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member I isoform X1
translation: MRVYIFLCLMCWVRSDNKRPCLEFSQLNVKDSFKDLFNPRIEIILMVYTRNNLNCAEPLFDQNNSLNINFNTQKKTVWLIHGYRPMGSTPSWLRNFLRILLNEEDVNIIVVDWNRGATTFIYNRAVKNTRKVAENLSRHIKNLLKHGASLDNFHFIGVSLGAHISGFVGKTFHGQLGRITGLDPAGPKFSGKPSYSRLDYTDAKFVDVIHSDSNGLGIKEPLGHIDFYPNGGTKQPGCPKSIFSGIEYIKCDHQRAVYLFMASLETHCNFISFPCHSYKDYKTSLCVDCDRFNEKSCPWLGYQAELLKGVLKERMQEGTLRTTVFLDTSGRYPFCTYYFVLSIIVLDETMKYGYISFKLLNQFGMTEEPKLYKRNQPFYKLQEVKILAQFLNDVVNISSIGLTYFQSSNLQCSTCQYRIRSLMLKSLTYPERPPLCRYNIALKENEEVFLNLDTCIPKKT
SIO_010081: LIPI
subclass of: SO_0000673
so part of: LIPI
location: complement(join(16562356..16562443,16575336..16575512,16580429..16580540,16593553..16593657,16595385..16595552,16596460..16596549,16601950..16602051,16604936..16605044,16606666..16607051,16621383..16621428))
location: region:16562356-16621428:-1
so has part: feature:16621383-16621428:-1:exon
so has part: feature:16606666-16607051:-1:exon
so has part: feature:16604936-16605044:-1:exon
so has part: feature:16601950-16602051:-1:exon
so has part: feature:16596460-16596549:-1:exon
so has part: feature:16595385-16595552:-1:exon
so has part: feature:16593553-16593657:-1:exon
so has part: feature:16580429-16580540:-1:exon
so has part: feature:16575336-16575512:-1:exon
so has part: feature:16562356-16562443:-1:exon

XP_012641438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16621383-16621428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16606666-16607051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16604936-16605044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16601950-16602051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16596460-16596549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16595385-16595552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16593553-16593657:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16580429-16580540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16575336-16575512:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16562356-16562443:-1:exon

RBM11
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: RBM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16626863..16641415
location: region:16626863-16641415:1
so has part: feature:16626863-16641415:1:exon
subclass of: SO_0000010

105883113
type: Gene
SIO_000068: ncbigene

position:16626863:1
position: 16626863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16641415:1
position: 16641415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16626863-16641415:1:exon

RBM11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RBM11
product: RNA binding motif protein 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012786030.1
SIO_010081: RBM11
subclass of: SO_0000673
so part of: RBM11
location: join(16626863..16627032,16630413..16630575,16632151..16632223,16637603..16637699,16639347..16641413)
location: region:16626863-16641413:1
so has part: feature:16626863-16627032:1:exon
so has part: feature:16630413-16630575:1:exon
so has part: feature:16632151-16632223:1:exon
so has part: feature:16637603-16637699:1:exon
so has part: feature:16639347-16641413:1:exon

position:16641413:1
position: 16641413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16626863-16627032:1:exon

position:16627032:1
position: 16627032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16630413-16630575:1:exon

position:16630413:1
position: 16630413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16630575:1
position: 16630575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16632151-16632223:1:exon

position:16632151:1
position: 16632151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16632223:1
position: 16632223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16637603-16637699:1:exon

position:16637603:1
position: 16637603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16637699:1
position: 16637699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16639347-16641413:1:exon

position:16639347:1
position: 16639347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBM11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RBM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing regulator RBM11 isoform X1
translation: MFPAQEEADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALLNGIRLYGRPINVQYRFGSSRSCEPANQSFESCVKINSQSYRNEEMVGRSSFPMQFFPINNTALPQEYFFFQKMQWHAYNPVLQLPYYEMTAPLPNSTSVSSSQNHVPDLEAGPSSYEWTHQQPSDSDLYQVNKRKRQKQTSDSDSSTENNRGNEYSQKFRKCKKKKRY
SIO_010081: RBM11
subclass of: SO_0000673
so part of: RBM11
location: join(16626937..16627032,16630413..16630575,16632151..16632223,16637603..16637699,16639347..16639634)
location: region:16626937-16639634:1
so has part: feature:16626937-16627032:1:exon
so has part: feature:16630413-16630575:1:exon
so has part: feature:16632151-16632223:1:exon
so has part: feature:16637603-16637699:1:exon
so has part: feature:16639347-16639634:1:exon

XP_012641484.1
type: Protein
SIO_000068: ncbiprotein

position:16626937:1
position: 16626937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16639634:1
position: 16639634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16626937-16627032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16630413-16630575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16632151-16632223:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16637603-16637699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16639347-16639634:1:exon

RBM11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RBM11
product: RNA binding motif protein 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012786031.1
SIO_010081: RBM11
subclass of: SO_0000673
so part of: RBM11
location: join(16627168..16627232,16630413..16630575,16632151..16632223,16637603..16637699,16639347..16641415)
location: region:16627168-16641415:1
so has part: feature:16627168-16627232:1:exon
so has part: feature:16630413-16630575:1:exon
so has part: feature:16632151-16632223:1:exon
so has part: feature:16637603-16637699:1:exon
so has part: feature:16639347-16641415:1:exon

position:16627168:1
position: 16627168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16627168-16627232:1:exon

position:16627232:1
position: 16627232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16630413-16630575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16632151-16632223:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16637603-16637699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16639347-16641415:1:exon

RBM11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RBM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing regulator RBM11 isoform X2
translation: MAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALLNGIRLYGRPINVQYRFGSSRSCEPANQSFESCVKINSQSYRNEEMVGRSSFPMQFFPINNTALPQEYFFFQKMQWHAYNPVLQLPYYEMTAPLPNSTSVSSSQNHVPDLEAGPSSYEWTHQQPSDSDLYQVNKRKRQKQTSDSDSSTENNRGNEYSQKFRKCKKKKRY
SIO_010081: RBM11
subclass of: SO_0000673
so part of: RBM11
location: join(16627230..16627232,16630413..16630575,16632151..16632223,16637603..16637699,16639347..16639634)
location: region:16627230-16639634:1
so has part: feature:16627230-16627232:1:exon
so has part: feature:16630413-16630575:1:exon
so has part: feature:16632151-16632223:1:exon
so has part: feature:16637603-16637699:1:exon
so has part: feature:16639347-16639634:1:exon

XP_012641485.1
type: Protein
SIO_000068: ncbiprotein

position:16627230:1
position: 16627230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16627230-16627232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16630413-16630575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16632151-16632223:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16637603-16637699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16639347-16639634:1:exon

LOC105883097
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105883097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16661460..16672133)
location: region:16661460-16672133:-1
so has part: feature:16661460-16672133:-1:exon
subclass of: SO_0000011

105883097
type: Gene
SIO_000068: ncbigene

position:16661460:-1
position: 16661460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16672133:-1
position: 16672133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16661460-16672133:-1:exon

LOC105883097
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105883097
product: uncharacterized LOC105883097
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159632.1
SIO_010081: LOC105883097
subclass of: SO_0000673
so part of: LOC105883097
location: complement(join(16661460..16661644,16662318..16662472,16672018..16672133))
location: region:16661460-16672133:-1
so has part: feature:16672018-16672133:-1:exon
so has part: feature:16662318-16662472:-1:exon
so has part: feature:16661460-16661644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16672018-16672133:-1:exon

position:16672018:-1
position: 16672018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16662318-16662472:-1:exon

position:16662318:-1
position: 16662318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16662472:-1
position: 16662472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16661460-16661644:-1:exon

position:16661644:-1
position: 16661644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105883091
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105883091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16679141..16758271
location: region:16679141-16758271:1
so has part: feature:16679141-16758271:1:exon
subclass of: SO_0000010

105883091
type: Gene
SIO_000068: ncbigene

position:16679141:1
position: 16679141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16758271:1
position: 16758271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16679141-16758271:1:exon

LOC105883091
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105883091
product: multidrug resistance-associated protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284744.1
SIO_010081: LOC105883091
subclass of: SO_0000673
so part of: LOC105883091
location: join(16679141..16679267,16687156..16687217,16693327..16693474,16694193..16694335,16698948..16699125,16706661..16706915,16708984..16709049,16711442..16711579,16713286..16713432,16715947..16716031,16716127..16716193,16716566..16716692,16720605..16720781,16723853..16724020,16725168..16725330,16729630..16729705,16735880..16735940,16736487..16736706,16742786..16742940,16744677..16744832,16747042..16747241,16748000..16748126,16749494..16749595,16752568..16752711,16754287..16754445,16756095..16756261,16757387..16757581,16757916..16758271)
location: region:16679141-16758271:1
so has part: feature:16679141-16679267:1:exon
so has part: feature:16687156-16687217:1:exon
so has part: feature:16693327-16693474:1:exon
so has part: feature:16694193-16694335:1:exon
so has part: feature:16698948-16699125:1:exon
so has part: feature:16706661-16706915:1:exon
so has part: feature:16708984-16709049:1:exon
so has part: feature:16711442-16711579:1:exon
so has part: feature:16713286-16713432:1:exon
so has part: feature:16715947-16716031:1:exon
so has part: feature:16716127-16716193:1:exon
so has part: feature:16716566-16716692:1:exon
so has part: feature:16720605-16720781:1:exon
so has part: feature:16723853-16724020:1:exon
so has part: feature:16725168-16725330:1:exon
so has part: feature:16729630-16729705:1:exon
so has part: feature:16735880-16735940:1:exon
so has part: feature:16736487-16736706:1:exon
so has part: feature:16742786-16742940:1:exon
so has part: feature:16744677-16744832:1:exon
so has part: feature:16747042-16747241:1:exon
so has part: feature:16748000-16748126:1:exon
so has part: feature:16749494-16749595:1:exon
so has part: feature:16752568-16752711:1:exon
so has part: feature:16754287-16754445:1:exon
so has part: feature:16756095-16756261:1:exon
so has part: feature:16757387-16757581:1:exon
so has part: feature:16757916-16758271:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16679141-16679267:1:exon

position:16679267:1
position: 16679267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16687156-16687217:1:exon

position:16687156:1
position: 16687156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16687217:1
position: 16687217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16693327-16693474:1:exon

position:16693327:1
position: 16693327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16693474:1
position: 16693474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16694193-16694335:1:exon

position:16694193:1
position: 16694193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16694335:1
position: 16694335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16698948-16699125:1:exon

position:16698948:1
position: 16698948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16699125:1
position: 16699125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16706661-16706915:1:exon

position:16706661:1
position: 16706661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16706915:1
position: 16706915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:16708984-16709049:1:exon

position:16708984:1
position: 16708984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16709049:1
position: 16709049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:16711442-16711579:1:exon

position:16711442:1
position: 16711442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16711579:1
position: 16711579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:16713286-16713432:1:exon

position:16713286:1
position: 16713286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16713432:1
position: 16713432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:16715947-16716031:1:exon

position:16715947:1
position: 16715947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16716031:1
position: 16716031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:16716127-16716193:1:exon

position:16716127:1
position: 16716127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16716193:1
position: 16716193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:16716566-16716692:1:exon

position:16716566:1
position: 16716566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16716692:1
position: 16716692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:16720605-16720781:1:exon

position:16720605:1
position: 16720605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16720781:1
position: 16720781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:16723853-16724020:1:exon

position:16723853:1
position: 16723853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16724020:1
position: 16724020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:16725168-16725330:1:exon

position:16725168:1
position: 16725168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16725330:1
position: 16725330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:16729630-16729705:1:exon

position:16729630:1
position: 16729630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16729705:1
position: 16729705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:16735880-16735940:1:exon

position:16735880:1
position: 16735880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16735940:1
position: 16735940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:16736487-16736706:1:exon

position:16736487:1
position: 16736487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16736706:1
position: 16736706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:16742786-16742940:1:exon

position:16742786:1
position: 16742786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16742940:1
position: 16742940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:16744677-16744832:1:exon

position:16744677:1
position: 16744677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16744832:1
position: 16744832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:16747042-16747241:1:exon

position:16747042:1
position: 16747042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16747241:1
position: 16747241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:16748000-16748126:1:exon

position:16748000:1
position: 16748000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16748126:1
position: 16748126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:16749494-16749595:1:exon

position:16749494:1
position: 16749494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16749595:1
position: 16749595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:16752568-16752711:1:exon

position:16752568:1
position: 16752568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16752711:1
position: 16752711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:16754287-16754445:1:exon

position:16754287:1
position: 16754287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16754445:1
position: 16754445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:16756095-16756261:1:exon

position:16756095:1
position: 16756095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16756261:1
position: 16756261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:16757387-16757581:1:exon

position:16757387:1
position: 16757387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16757581:1
position: 16757581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:16757916-16758271:1:exon

position:16757916:1
position: 16757916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105883091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105883091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multidrug resistance-associated protein 1-like
translation: MFSSLQRWDTRGSYKQVPGMLDAQKCGSEKSASFFSKVTYSWFSSLITLGYKKPLEREDLFEINDSDSSYVVYPIFEKQWRKEVLRNQERQKVKASFCKEACTRKPSLLYALWNTFKSALIQVALFRVFADILFFTSPLIMKQMIIFCEHSSDFGWIGYGYAVALFVVVFLQTLILQQYQRFNTLTSAKIKTAVIGLIYKKSLLLSNVSRKKFSTGQIINLMSADAQQLMDFTANLNLLWSGPFQILMAIYLLWQELGSAVLAGVAVLVFVIPINALAATRVKKLKKSQKKNKDKQIKLLKEILHGIKILKLYAWEPFYQNKIIEIRDEELEFQKSARYLTVFSRLALTCIPFLVSLVTFRVYFLLDEENILTATKVFTSMSLFNILRIPLFELPQVISTVVQTRISLDRLEDFLNDEELLPQNIETNYIGDHAIGFTNASFSWDKTGIPVLKDLNIKIPEGALVAVVGPVGSGKSSVLSAILGEMEKLTGVVQRKGSVAYVSQQAWIQNCVLQENILFGSVMQKQFYERVLEACALLPDLEQLPNGDQTEIGERGVNISGGQKHRVSLARAVYSGADIYLLDDPLSAVDVHVGKQLFEKVIGSLGLLKDKTRILVTNNLTLLPQMDLIVVMESGRVAHMGTYQELISKTKSLTNLLEVFSEQEKAHAPKQVSVINSRTILKEQILEQKDRSSLDQGKQFSMKKENIPTGGVKFSIILKYLQSFNWLWVWLVLVTYLGQNLTSIGQNLWLSAWAREAKHMNEFTEWKQIRSYKLNIYGLLGLIQGLFVCSGAYVVTKGSLTASRTMYAQLLNNVLHLPLQFFETTPIGQIVSRFTKDMFVIDTRFHYYFRMWMNCTLDVVGTVLVIAGALPLFILGIIPLVFFYFSIQRYYMASSRQIRRLAGASRSPIISHLSETLSGVSTIRAFGHEHRFIQQNKEVVNENLVCFYNNVISNRWLSVRLEFLGNIMVFFAALLAVLAGNSIDSAIVGLSISYALNITHSLNFWVKQACEIESNAVSIERVCEYENMDKEAPWIMSRRPPLQWPNKGIVEFINYQARYRDDLGLALQDITFKTREEEKIGIVGRTGAGKSTLSNCLFRIVERSGGKIIIDGIDISTIGLHDLRGKLNIIPQDPVLFSGTLQMNLDPLNNCSDSELWEVLELCHLKEFVQSLPEKLLHKISEGGENLSVGQRQLVCLARALLRKTKILILDEATASIDFKTDSLVQTTIRKEFSDCTILTIAHRLHSIIDADRVLVLDSGRIMEFEAPQNLIDQKGLFFEMATEAGITPDSRTKK
SIO_010081: LOC105883091
subclass of: SO_0000673
so part of: LOC105883091
location: join(16679196..16679267,16687156..16687217,16693327..16693474,16694193..16694335,16698948..16699125,16706661..16706915,16708984..16709049,16711442..16711579,16713286..16713432,16715947..16716031,16716127..16716193,16716566..16716692,16720605..16720781,16723853..16724020,16725168..16725330,16729630..16729705,16735880..16735940,16736487..16736706,16742786..16742940,16744677..16744832,16747042..16747241,16748000..16748126,16749494..16749595,16752568..16752711,16754287..16754445,16756095..16756261,16757387..16757581,16757916..16758045)
location: region:16679196-16758045:1
so has part: feature:16679196-16679267:1:exon
so has part: feature:16687156-16687217:1:exon
so has part: feature:16693327-16693474:1:exon
so has part: feature:16694193-16694335:1:exon
so has part: feature:16698948-16699125:1:exon
so has part: feature:16706661-16706915:1:exon
so has part: feature:16708984-16709049:1:exon
so has part: feature:16711442-16711579:1:exon
so has part: feature:16713286-16713432:1:exon
so has part: feature:16715947-16716031:1:exon
so has part: feature:16716127-16716193:1:exon
so has part: feature:16716566-16716692:1:exon
so has part: feature:16720605-16720781:1:exon
so has part: feature:16723853-16724020:1:exon
so has part: feature:16725168-16725330:1:exon
so has part: feature:16729630-16729705:1:exon
so has part: feature:16735880-16735940:1:exon
so has part: feature:16736487-16736706:1:exon
so has part: feature:16742786-16742940:1:exon
so has part: feature:16744677-16744832:1:exon
so has part: feature:16747042-16747241:1:exon
so has part: feature:16748000-16748126:1:exon
so has part: feature:16749494-16749595:1:exon
so has part: feature:16752568-16752711:1:exon
so has part: feature:16754287-16754445:1:exon
so has part: feature:16756095-16756261:1:exon
so has part: feature:16757387-16757581:1:exon
so has part: feature:16757916-16758045:1:exon

XP_020140333.1
type: Protein
SIO_000068: ncbiprotein

position:16679196:1
position: 16679196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16758045:1
position: 16758045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16679196-16679267:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16687156-16687217:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16693327-16693474:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16694193-16694335:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16698948-16699125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16706661-16706915:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16708984-16709049:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16711442-16711579:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16713286-16713432:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16715947-16716031:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16716127-16716193:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:16716566-16716692:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:16720605-16720781:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:16723853-16724020:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:16725168-16725330:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16729630-16729705:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:16735880-16735940:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:16736487-16736706:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:16742786-16742940:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:16744677-16744832:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:16747042-16747241:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:16748000-16748126:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:16749494-16749595:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:16752568-16752711:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:16754287-16754445:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:16756095-16756261:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:16757387-16757581:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:16757916-16758045:1:exon

HSPA13
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: HSPA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16764829..16776181)
location: region:16764829-16776181:-1
so has part: feature:16764829-16776181:-1:exon
subclass of: SO_0000010

105883109
type: Gene
SIO_000068: ncbigene

position:16764829:-1
position: 16764829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16776181:-1
position: 16776181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16764829-16776181:-1:exon

HSPA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: HSPA13
product: heat shock protein family A (Hsp70) member 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 329 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012786023.1
SIO_010081: HSPA13
subclass of: SO_0000673
so part of: HSPA13
location: complement(join(16764829..16767994,16769636..16769803,16771617..16771830,16774105..16774445,16775954..16776181))
location: region:16764829-16776181:-1
so has part: feature:16775954-16776181:-1:exon
so has part: feature:16774105-16774445:-1:exon
so has part: feature:16771617-16771830:-1:exon
so has part: feature:16769636-16769803:-1:exon
so has part: feature:16764829-16767994:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16775954-16776181:-1:exon

position:16775954:-1
position: 16775954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16774105-16774445:-1:exon

position:16774105:-1
position: 16774105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16774445:-1
position: 16774445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16771617-16771830:-1:exon

position:16771617:-1
position: 16771617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16771830:-1
position: 16771830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16769636-16769803:-1:exon

position:16769636:-1
position: 16769636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16769803:-1
position: 16769803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16764829-16767994:-1:exon

position:16767994:-1
position: 16767994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSPA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: HSPA13
product: heat shock protein family A (Hsp70) member 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012786024.2
SIO_010081: HSPA13
subclass of: SO_0000673
so part of: HSPA13
location: complement(join(16767326..16767994,16769636..16769803,16771617..16771830,16774105..16774445,16775833..16775921))
location: region:16767326-16775921:-1
so has part: feature:16775833-16775921:-1:exon
so has part: feature:16774105-16774445:-1:exon
so has part: feature:16771617-16771830:-1:exon
so has part: feature:16769636-16769803:-1:exon
so has part: feature:16767326-16767994:-1:exon

position:16767326:-1
position: 16767326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16775921:-1
position: 16775921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16775833-16775921:-1:exon

position:16775833:-1
position: 16775833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16774105-16774445:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16771617-16771830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16769636-16769803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16767326-16767994:-1:exon

HSPA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: HSPA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 13 isoform X1
translation: MAGEMTILGSAVLTLLLAGYLAQQYLPLPTPKVLGIDLGTTYCSVGVFFPGTGKVKVIPDENGHISIPSMVSFTDSDVYVGYESLELADSNPQNTIYDAKRFIGKIFTPEELEAEIGRYPFKVLNKNGMVEFSVTSNETITVSPEYVGSRLLLKLKEMAEEYLGMPVANAVISVPAEFDLKQRNSTIEAANLAGLKILRVINEPTAAAMAYGLHKADVFHVLVIDLGGGTLDVSLLNKQGGMFLTRAMSGNNKLGGQDFNQRLLQYLYKQIYQAYGFIPSRKEEIHRLRQAVEMVKLNLTLHQSAQLSVLLTVEENNRKEPQSSDPELPKDRLSPADGHHVNSGFGPGLIEKKSGESQVLFETEISRKLFDTLNEDLFQKILVPIQQVLKEGHLEKTEIDEVVLVGGSTRIPRIRQVIQEFFGKDPNTSVDPDLAVVTGVAIQAGIDGGSWPLQVSALEIPNKHLQKTNFN
SIO_010081: HSPA13
subclass of: SO_0000673
so part of: HSPA13
location: complement(join(16767327..16767994,16769636..16769803,16771617..16771830,16774105..16774445,16775954..16775978))
location: region:16767327-16775978:-1
so has part: feature:16775954-16775978:-1:exon
so has part: feature:16774105-16774445:-1:exon
so has part: feature:16771617-16771830:-1:exon
so has part: feature:16769636-16769803:-1:exon
so has part: feature:16767327-16767994:-1:exon

XP_012641477.1
type: Protein
SIO_000068: ncbiprotein

position:16767327:-1
position: 16767327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16775978:-1
position: 16775978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16775954-16775978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16774105-16774445:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16771617-16771830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16769636-16769803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16767327-16767994:-1:exon

HSPA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: HSPA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 13 isoform X2
translation: MVSFTDSDVYVGYESLELADSNPQNTIYDAKRFIGKIFTPEELEAEIGRYPFKVLNKNGMVEFSVTSNETITVSPEYVGSRLLLKLKEMAEEYLGMPVANAVISVPAEFDLKQRNSTIEAANLAGLKILRVINEPTAAAMAYGLHKADVFHVLVIDLGGGTLDVSLLNKQGGMFLTRAMSGNNKLGGQDFNQRLLQYLYKQIYQAYGFIPSRKEEIHRLRQAVEMVKLNLTLHQSAQLSVLLTVEENNRKEPQSSDPELPKDRLSPADGHHVNSGFGPGLIEKKSGESQVLFETEISRKLFDTLNEDLFQKILVPIQQVLKEGHLEKTEIDEVVLVGGSTRIPRIRQVIQEFFGKDPNTSVDPDLAVVTGVAIQAGIDGGSWPLQVSALEIPNKHLQKTNFN
SIO_010081: HSPA13
subclass of: SO_0000673
so part of: HSPA13
location: complement(join(16767327..16767994,16769636..16769803,16771617..16771830,16774105..16774263))
location: region:16767327-16774263:-1
so has part: feature:16774105-16774263:-1:exon
so has part: feature:16771617-16771830:-1:exon
so has part: feature:16769636-16769803:-1:exon
so has part: feature:16767327-16767994:-1:exon

XP_012641478.1
type: Protein
SIO_000068: ncbiprotein

position:16774263:-1
position: 16774263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16774105-16774263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16771617-16771830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16769636-16769803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16767327-16767994:-1:exon

LOC105883111
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105883111
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16880237..16885760
location: region:16880237-16885760:1
so has part: feature:16880237-16885760:1:exon
subclass of: SO_0000011

105883111
type: Gene
SIO_000068: ncbigene

position:16880237:1
position: 16880237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16885760:1
position: 16885760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16880237-16885760:1:exon

LOC105883111
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105883111
product: uncharacterized LOC105883111
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222896.1
SIO_010081: LOC105883111
subclass of: SO_0000673
so part of: LOC105883111
location: join(16880237..16881376,16883927..16884033,16885676..16885760)
location: region:16880237-16885760:1
so has part: feature:16880237-16881376:1:exon
so has part: feature:16883927-16884033:1:exon
so has part: feature:16885676-16885760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16880237-16881376:1:exon

position:16881376:1
position: 16881376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16883927-16884033:1:exon

position:16883927:1
position: 16883927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16884033:1
position: 16884033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16885676-16885760:1:exon

position:16885676:1
position: 16885676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SAMSN1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: SAMSN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16881762..17009635)
location: region:16881762-17009635:-1
so has part: feature:16881762-17009635:-1:exon
subclass of: SO_0000010

105883110
type: Gene
SIO_000068: ncbigene

position:16881762:-1
position: 16881762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17009635:-1
position: 17009635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16881762-17009635:-1:exon

SAMSN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SAMSN1
product: SAM domain, SH3 domain and nuclear localization signals 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284681.1
SIO_010081: SAMSN1
subclass of: SO_0000673
so part of: SAMSN1
location: complement(join(16881762..16882626,16893849..16893999,16895948..16896154,16899883..16900034,16901895..16902024,16905910..16906059,16909586..16909657,16978276..16978628,16979885..16980011,16997948..16998027,17004767..17004853,17006903..17006940,17009602..17009635))
location: region:16881762-17009635:-1
so has part: feature:17009602-17009635:-1:exon
so has part: feature:17006903-17006940:-1:exon
so has part: feature:17004767-17004853:-1:exon
so has part: feature:16997948-16998027:-1:exon
so has part: feature:16979885-16980011:-1:exon
so has part: feature:16978276-16978628:-1:exon
so has part: feature:16909586-16909657:-1:exon
so has part: feature:16905910-16906059:-1:exon
so has part: feature:16901895-16902024:-1:exon
so has part: feature:16899883-16900034:-1:exon
so has part: feature:16895948-16896154:-1:exon
so has part: feature:16893849-16893999:-1:exon
so has part: feature:16881762-16882626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17009602-17009635:-1:exon

position:17009602:-1
position: 17009602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17006903-17006940:-1:exon

position:17006903:-1
position: 17006903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17006940:-1
position: 17006940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17004767-17004853:-1:exon

position:17004767:-1
position: 17004767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17004853:-1
position: 17004853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16997948-16998027:-1:exon

position:16997948:-1
position: 16997948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16998027:-1
position: 16998027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16979885-16980011:-1:exon

position:16979885:-1
position: 16979885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16980011:-1
position: 16980011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16978276-16978628:-1:exon

position:16978276:-1
position: 16978276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16978628:-1
position: 16978628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:16909586-16909657:-1:exon

position:16909586:-1
position: 16909586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16909657:-1
position: 16909657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:16905910-16906059:-1:exon

position:16905910:-1
position: 16905910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16906059:-1
position: 16906059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:16901895-16902024:-1:exon

position:16901895:-1
position: 16901895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16902024:-1
position: 16902024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:16899883-16900034:-1:exon

position:16899883:-1
position: 16899883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16900034:-1
position: 16900034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:16895948-16896154:-1:exon

position:16895948:-1
position: 16895948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16896154:-1
position: 16896154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:16893849-16893999:-1:exon

position:16893849:-1
position: 16893849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16893999:-1
position: 16893999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:16881762-16882626:-1:exon

position:16882626:-1
position: 16882626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SAMSN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SAMSN1
product: SAM domain, SH3 domain and nuclear localization signals 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 51 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012786025.2
SIO_010081: SAMSN1
subclass of: SO_0000673
so part of: SAMSN1
location: complement(join(16881762..16882626,16893849..16893999,16895948..16896154,16899883..16900034,16901895..16902024,16905910..16906059,16909586..16909657,16938601..16938756))
location: region:16881762-16938756:-1
so has part: feature:16938601-16938756:-1:exon
so has part: feature:16909586-16909657:-1:exon
so has part: feature:16905910-16906059:-1:exon
so has part: feature:16901895-16902024:-1:exon
so has part: feature:16899883-16900034:-1:exon
so has part: feature:16895948-16896154:-1:exon
so has part: feature:16893849-16893999:-1:exon
so has part: feature:16881762-16882626:-1:exon

position:16938756:-1
position: 16938756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16938601-16938756:-1:exon

position:16938601:-1
position: 16938601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16909586-16909657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16905910-16906059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16901895-16902024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16899883-16900034:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16895948-16896154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16893849-16893999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16881762-16882626:-1:exon

SAMSN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SAMSN1
product: SAM domain, SH3 domain and nuclear localization signals 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012786026.1
SIO_010081: SAMSN1
subclass of: SO_0000673
so part of: SAMSN1
location: complement(join(16881762..16882626,16893849..16893999,16895948..16896154,16899883..16900034,16901895..16902024,16905910..16906059,16909586..16909657,16934226..16934337,16938601..16938696))
location: region:16881762-16938696:-1
so has part: feature:16938601-16938696:-1:exon
so has part: feature:16934226-16934337:-1:exon
so has part: feature:16909586-16909657:-1:exon
so has part: feature:16905910-16906059:-1:exon
so has part: feature:16901895-16902024:-1:exon
so has part: feature:16899883-16900034:-1:exon
so has part: feature:16895948-16896154:-1:exon
so has part: feature:16893849-16893999:-1:exon
so has part: feature:16881762-16882626:-1:exon

position:16938696:-1
position: 16938696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16938601-16938696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16934226-16934337:-1:exon

position:16934226:-1
position: 16934226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16934337:-1
position: 16934337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16909586-16909657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16905910-16906059:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16901895-16902024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16899883-16900034:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16895948-16896154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16893849-16893999:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16881762-16882626:-1:exon

SAMSN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SAMSN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SAM domain-containing protein SAMSN-1 isoform X3
translation: MSENKIFEGKTVNDKIWQETSKPENDSYIRRPCQLQDQNDDDFLLSNTIHTLQGKKLQRTSDQAIKSEGDPVESMRTLKRLQKLVWSKKARVPSLDEAKPTLINLQDEDDTLISCLKLTKSQGKKVSNISTRRKEEMEIGLGSLSASLSRSSTSNECNLEHMLVHCEGEVHMWHSWKPFPENPIWPYVDFQISQFGSWDHSSSCIHHPHLKSSCSDMDLLHSWRSSSFGNFDRFRNNPTSKPDDLTEKHNGEPINESGEQNKTSSNGGGLGKKVRAISWTMKKKVGKKYIKALSEEKDEEDGEGVLPYRNSDPVMGTHTEKFSLKASESMDSLYSGQSSSSGITSCSDGTSNRDSFRLDDDGPYSGPFCGRARVHTDFTPSPYDTDSLKIKKGDIIDIICKTPMGMWTGMLNNKVGNFKFIYVDVISEEEAAPRKIKVHQRSKREKPKSLQEFLEKIHLQEYTSTLLLNGYETLEDLKDIKESHLIELNIENPEDRMRLLSAAENLLDEETVQEQENEPVPLSLSPDISSNKSQLDDCPRDSGCYISSGNSDNGKEDLDSENLPDMVHKISITEPSD
SIO_010081: SAMSN1
subclass of: SO_0000673
so part of: SAMSN1
location: complement(join(16882424..16882626,16893849..16893999,16895948..16896154,16899883..16900034,16901895..16902024,16905910..16906059,16909586..16909657,16978276..16978628,16979885..16980011,16997948..16998027,17004767..17004853,17006903..17006924))
location: region:16882424-17006924:-1
so has part: feature:17006903-17006924:-1:exon
so has part: feature:17004767-17004853:-1:exon
so has part: feature:16997948-16998027:-1:exon
so has part: feature:16979885-16980011:-1:exon
so has part: feature:16978276-16978628:-1:exon
so has part: feature:16909586-16909657:-1:exon
so has part: feature:16905910-16906059:-1:exon
so has part: feature:16901895-16902024:-1:exon
so has part: feature:16899883-16900034:-1:exon
so has part: feature:16895948-16896154:-1:exon
so has part: feature:16893849-16893999:-1:exon
so has part: feature:16882424-16882626:-1:exon

XP_020140270.1
type: Protein
SIO_000068: ncbiprotein

position:16882424:-1
position: 16882424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17006924:-1
position: 17006924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17006903-17006924:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17004767-17004853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16997948-16998027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16979885-16980011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16978276-16978628:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16909586-16909657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16905910-16906059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16901895-16902024:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16899883-16900034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16895948-16896154:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16893849-16893999:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:16882424-16882626:-1:exon

SAMSN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SAMSN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SAM domain-containing protein SAMSN-1 isoform X1
translation: MLKRKPSNVSEKEKHQKPKRSSSFGNFDRFRNNPTSKPDDLTEKHNGEPINESGEQNKTSSNGGGLGKKVRAISWTMKKKVGKKYIKALSEEKDEEDGEGVLPYRNSDPVMGTHTEKFSLKASESMDSLYSGQSSSSGITSCSDGTSNRDSFRLDDDGPYSGPFCGRARVHTDFTPSPYDTDSLKIKKGDIIDIICKTPMGMWTGMLNNKVGNFKFIYVDVISEEEAAPRKIKVHQRSKREKPKSLQEFLEKIHLQEYTSTLLLNGYETLEDLKDIKESHLIELNIENPEDRMRLLSAAENLLDEETVQEQENEPVPLSLSPDISSNKSQLDDCPRDSGCYISSGNSDNGKEDLDSENLPDMVHKISITEPSD
SIO_010081: SAMSN1
subclass of: SO_0000673
so part of: SAMSN1
location: complement(join(16882424..16882626,16893849..16893999,16895948..16896154,16899883..16900034,16901895..16902024,16905910..16906059,16909586..16909657,16938601..16938657))
location: region:16882424-16938657:-1
so has part: feature:16938601-16938657:-1:exon
so has part: feature:16909586-16909657:-1:exon
so has part: feature:16905910-16906059:-1:exon
so has part: feature:16901895-16902024:-1:exon
so has part: feature:16899883-16900034:-1:exon
so has part: feature:16895948-16896154:-1:exon
so has part: feature:16893849-16893999:-1:exon
so has part: feature:16882424-16882626:-1:exon

XP_012641479.1
type: Protein
SIO_000068: ncbiprotein

position:16938657:-1
position: 16938657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16938601-16938657:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16909586-16909657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16905910-16906059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16901895-16902024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16899883-16900034:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16895948-16896154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16893849-16893999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16882424-16882626:-1:exon

SAMSN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SAMSN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SAM domain-containing protein SAMSN-1 isoform X2
translation: MKKKVGKKYIKALSEEKDEEDGEGVLPYRNSDPVMGTHTEKFSLKASESMDSLYSGQSSSSGITSCSDGTSNRDSFRLDDDGPYSGPFCGRARVHTDFTPSPYDTDSLKIKKGDIIDIICKTPMGMWTGMLNNKVGNFKFIYVDVISEEEAAPRKIKVHQRSKREKPKSLQEFLEKIHLQEYTSTLLLNGYETLEDLKDIKESHLIELNIENPEDRMRLLSAAENLLDEETVQEQENEPVPLSLSPDISSNKSQLDDCPRDSGCYISSGNSDNGKEDLDSENLPDMVHKISITEPSD
SIO_010081: SAMSN1
subclass of: SO_0000673
so part of: SAMSN1
location: complement(join(16882424..16882626,16893849..16893999,16895948..16896154,16899883..16900034,16901895..16902024,16905910..16905960))
location: region:16882424-16905960:-1
so has part: feature:16905910-16905960:-1:exon
so has part: feature:16901895-16902024:-1:exon
so has part: feature:16899883-16900034:-1:exon
so has part: feature:16895948-16896154:-1:exon
so has part: feature:16893849-16893999:-1:exon
so has part: feature:16882424-16882626:-1:exon

XP_012641480.1
type: Protein
SIO_000068: ncbiprotein

position:16905960:-1
position: 16905960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16905910-16905960:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16901895-16902024:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16899883-16900034:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16895948-16896154:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16893849-16893999:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16882424-16882626:-1:exon

LOC105883112
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105883112
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17049722..17075002)
location: region:17049722-17075002:-1
so has part: feature:17049722-17075002:-1:exon
subclass of: SO_0000011

105883112
type: Gene
SIO_000068: ncbigene

position:17049722:-1
position: 17049722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17075002:-1
position: 17075002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17049722-17075002:-1:exon

LOC105883112
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105883112
product: uncharacterized LOC105883112
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159641.1
SIO_010081: LOC105883112
subclass of: SO_0000673
so part of: LOC105883112
location: complement(join(17049722..17050003,17059083..17059258,17074947..17075002))
location: region:17049722-17075002:-1
so has part: feature:17074947-17075002:-1:exon
so has part: feature:17059083-17059258:-1:exon
so has part: feature:17049722-17050003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17074947-17075002:-1:exon

position:17074947:-1
position: 17074947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17059083-17059258:-1:exon

position:17059083:-1
position: 17059083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17059258:-1
position: 17059258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17049722-17050003:-1:exon

position:17050003:-1
position: 17050003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NRIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: NRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17274182..17365549)
location: region:17274182-17365549:-1
so has part: feature:17274182-17365549:-1:exon
subclass of: SO_0000010

105883108
type: Gene
SIO_000068: ncbigene

position:17274182:-1
position: 17274182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17365549:-1
position: 17365549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17274182-17365549:-1:exon

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NRIP1
product: nuclear receptor interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 237 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012786016.2
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(17274182..17281438,17320539..17320661,17343493..17343574,17365025..17365549))
location: region:17274182-17365549:-1
so has part: feature:17365025-17365549:-1:exon
so has part: feature:17343493-17343574:-1:exon
so has part: feature:17320539-17320661:-1:exon
so has part: feature:17274182-17281438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17365025-17365549:-1:exon

position:17365025:-1
position: 17365025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17343493-17343574:-1:exon

position:17343493:-1
position: 17343493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17343574:-1
position: 17343574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17320539-17320661:-1:exon

position:17320539:-1
position: 17320539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17320661:-1
position: 17320661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17274182-17281438:-1:exon

position:17281438:-1
position: 17281438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NRIP1
product: nuclear receptor interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 238 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012786015.1
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(17274182..17281438,17320539..17320661,17343493..17343574,17364055..17364226))
location: region:17274182-17364226:-1
so has part: feature:17364055-17364226:-1:exon
so has part: feature:17343493-17343574:-1:exon
so has part: feature:17320539-17320661:-1:exon
so has part: feature:17274182-17281438:-1:exon

position:17364226:-1
position: 17364226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17364055-17364226:-1:exon

position:17364055:-1
position: 17364055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17343493-17343574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17320539-17320661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17274182-17281438:-1:exon

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NRIP1
product: nuclear receptor interacting protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 236 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012786017.2
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(17274182..17281438,17320539..17320661,17343493..17343574,17363409..17363564))
location: region:17274182-17363564:-1
so has part: feature:17363409-17363564:-1:exon
so has part: feature:17343493-17343574:-1:exon
so has part: feature:17320539-17320661:-1:exon
so has part: feature:17274182-17281438:-1:exon

position:17363564:-1
position: 17363564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17363409-17363564:-1:exon

position:17363409:-1
position: 17363409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17343493-17343574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17320539-17320661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17274182-17281438:-1:exon

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NRIP1
product: nuclear receptor interacting protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 236 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012786021.1
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(17274182..17281438,17320539..17320661,17343493..17343574,17363077..17363390))
location: region:17274182-17363390:-1
so has part: feature:17363077-17363390:-1:exon
so has part: feature:17343493-17343574:-1:exon
so has part: feature:17320539-17320661:-1:exon
so has part: feature:17274182-17281438:-1:exon

position:17363390:-1
position: 17363390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17363077-17363390:-1:exon

position:17363077:-1
position: 17363077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17343493-17343574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17320539-17320661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17274182-17281438:-1:exon

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NRIP1
product: nuclear receptor interacting protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 236 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012786018.2
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(17274182..17281438,17320539..17320661,17343493..17343574,17355299..17355787))
location: region:17274182-17355787:-1
so has part: feature:17355299-17355787:-1:exon
so has part: feature:17343493-17343574:-1:exon
so has part: feature:17320539-17320661:-1:exon
so has part: feature:17274182-17281438:-1:exon

position:17355787:-1
position: 17355787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17355299-17355787:-1:exon

position:17355299:-1
position: 17355299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17343493-17343574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17320539-17320661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17274182-17281438:-1:exon

NRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NRIP1
product: nuclear receptor interacting protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 236 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012786020.2
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(join(17274182..17281438,17320539..17320661,17343493..17343574,17349026..17353591))
location: region:17274182-17353591:-1
so has part: feature:17349026-17353591:-1:exon
so has part: feature:17343493-17343574:-1:exon
so has part: feature:17320539-17320661:-1:exon
so has part: feature:17274182-17281438:-1:exon

position:17353591:-1
position: 17353591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17349026-17353591:-1:exon

position:17349026:-1
position: 17349026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17343493-17343574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17320539-17320661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17274182-17281438:-1:exon

NRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1
translation: MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNISGSAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIVNLNVKKEALLAGMVDNVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKAKDQKPDTSLPEVTKNLIRDRFVESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSFQLSKGMSGHLNGQARTSSSRLMASKSNATTFQNPVGIVPSSPKNAGYKNSLDKNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEDSSTPTTVDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRIEKPESDQPVSLDNLTQSLLNTWDPKVPDVDSKEDQDTSNNSKLNSHQKVTLLQLLLGHKNEGNVEKNASPQGVHCDVTKFNTQNYTRTSVIESPSANRTTPVSTPPLLTSAKAESPINLSQHSLVIKWNSPPYACSTQSEKPTNTASNHSMDLTKSKESQGEKPAPNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRASKQMLSVNTDKPVGMIDRLNSPLLSNKTNAVEENKAFSSQPIGPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKIPLRDESTQEHTDRALSEQILMVKIKSEPCDDLHIHNTNMHLSHDAKSAPFLGMAPTVQRSTAALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQESYLADDSDRSHRNNELTLLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNSSAPEVLYGPLLNQEELKFSRNDLEFKYPAGHGSASENEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSNSVIDSKKKGHKNNVTNSKPEFSFSSLNGLMYSSTQPNNVMDNRTFSYPGVLKTPMSPPFPEHLGCAGSRPEPGHLNGCSVPSEKGPIKWVITDVDKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQDRDIWRDPSSAESVSQVTIKEELVPAAETKASFFNLRSPYNSHMGNNASRPHSANGEVYGLLGNVLTIKKESE
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(17277617..17281087)
location: region:17277617-17281087:-1
so has part: feature:17277617-17281087:-1:exon

XP_012641469.1
type: Protein
SIO_000068: ncbiprotein

position:17277617:-1
position: 17277617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17281087:-1
position: 17281087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17277617-17281087:-1:exon

NRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1
translation: MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNISGSAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIVNLNVKKEALLAGMVDNVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKAKDQKPDTSLPEVTKNLIRDRFVESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSFQLSKGMSGHLNGQARTSSSRLMASKSNATTFQNPVGIVPSSPKNAGYKNSLDKNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEDSSTPTTVDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRIEKPESDQPVSLDNLTQSLLNTWDPKVPDVDSKEDQDTSNNSKLNSHQKVTLLQLLLGHKNEGNVEKNASPQGVHCDVTKFNTQNYTRTSVIESPSANRTTPVSTPPLLTSAKAESPINLSQHSLVIKWNSPPYACSTQSEKPTNTASNHSMDLTKSKESQGEKPAPNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRASKQMLSVNTDKPVGMIDRLNSPLLSNKTNAVEENKAFSSQPIGPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKIPLRDESTQEHTDRALSEQILMVKIKSEPCDDLHIHNTNMHLSHDAKSAPFLGMAPTVQRSTAALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQESYLADDSDRSHRNNELTLLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNSSAPEVLYGPLLNQEELKFSRNDLEFKYPAGHGSASENEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSNSVIDSKKKGHKNNVTNSKPEFSFSSLNGLMYSSTQPNNVMDNRTFSYPGVLKTPMSPPFPEHLGCAGSRPEPGHLNGCSVPSEKGPIKWVITDVDKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQDRDIWRDPSSAESVSQVTIKEELVPAAETKASFFNLRSPYNSHMGNNASRPHSANGEVYGLLGNVLTIKKESE
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(17277617..17281087)
location: region:17277617-17281087:-1
so has part: feature:17277617-17281087:-1:exon

XP_012641470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17277617-17281087:-1:exon

NRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1
translation: MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNISGSAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIVNLNVKKEALLAGMVDNVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKAKDQKPDTSLPEVTKNLIRDRFVESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSFQLSKGMSGHLNGQARTSSSRLMASKSNATTFQNPVGIVPSSPKNAGYKNSLDKNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEDSSTPTTVDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRIEKPESDQPVSLDNLTQSLLNTWDPKVPDVDSKEDQDTSNNSKLNSHQKVTLLQLLLGHKNEGNVEKNASPQGVHCDVTKFNTQNYTRTSVIESPSANRTTPVSTPPLLTSAKAESPINLSQHSLVIKWNSPPYACSTQSEKPTNTASNHSMDLTKSKESQGEKPAPNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRASKQMLSVNTDKPVGMIDRLNSPLLSNKTNAVEENKAFSSQPIGPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKIPLRDESTQEHTDRALSEQILMVKIKSEPCDDLHIHNTNMHLSHDAKSAPFLGMAPTVQRSTAALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQESYLADDSDRSHRNNELTLLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNSSAPEVLYGPLLNQEELKFSRNDLEFKYPAGHGSASENEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSNSVIDSKKKGHKNNVTNSKPEFSFSSLNGLMYSSTQPNNVMDNRTFSYPGVLKTPMSPPFPEHLGCAGSRPEPGHLNGCSVPSEKGPIKWVITDVDKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQDRDIWRDPSSAESVSQVTIKEELVPAAETKASFFNLRSPYNSHMGNNASRPHSANGEVYGLLGNVLTIKKESE
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(17277617..17281087)
location: region:17277617-17281087:-1
so has part: feature:17277617-17281087:-1:exon

XP_012641471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17277617-17281087:-1:exon

NRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1
translation: MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNISGSAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIVNLNVKKEALLAGMVDNVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKAKDQKPDTSLPEVTKNLIRDRFVESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSFQLSKGMSGHLNGQARTSSSRLMASKSNATTFQNPVGIVPSSPKNAGYKNSLDKNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEDSSTPTTVDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRIEKPESDQPVSLDNLTQSLLNTWDPKVPDVDSKEDQDTSNNSKLNSHQKVTLLQLLLGHKNEGNVEKNASPQGVHCDVTKFNTQNYTRTSVIESPSANRTTPVSTPPLLTSAKAESPINLSQHSLVIKWNSPPYACSTQSEKPTNTASNHSMDLTKSKESQGEKPAPNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRASKQMLSVNTDKPVGMIDRLNSPLLSNKTNAVEENKAFSSQPIGPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKIPLRDESTQEHTDRALSEQILMVKIKSEPCDDLHIHNTNMHLSHDAKSAPFLGMAPTVQRSTAALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQESYLADDSDRSHRNNELTLLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNSSAPEVLYGPLLNQEELKFSRNDLEFKYPAGHGSASENEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSNSVIDSKKKGHKNNVTNSKPEFSFSSLNGLMYSSTQPNNVMDNRTFSYPGVLKTPMSPPFPEHLGCAGSRPEPGHLNGCSVPSEKGPIKWVITDVDKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQDRDIWRDPSSAESVSQVTIKEELVPAAETKASFFNLRSPYNSHMGNNASRPHSANGEVYGLLGNVLTIKKESE
SIO_010081: NRIP1
subclass of: SO_0000673
so part of: NRIP1
location: complement(17277617..17281087)
location: region:17277617-17281087:-1
so has part: feature:17277617-17281087:-1:exon

XP_012641472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17277617-17281087:-1:exon