Microcebus murinus isolate mixed chromosome 30, Mmur_3.0, whole genome shotgun sequence.
type: Entry
definition: Microcebus murinus isolate mixed chromosome 30, Mmur_3.0, whole genome shotgun sequence.
sequence version: NC_033689.1
sequence date: 2017-02-27
sequence: sequence
division: CON
label: NC_033689.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA285159
dblink: SAMN06275470
keyword: WGS
keyword: RefSeq
source: Microcebus murinus (gray mouse lemur)
organism: Microcebus murinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM007690.1.\nAssembly name: Mmur_3.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2017/02/06. The original whole-genome shotgun project has the\naccession ABDC00000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Date :: MAY-2015\nAssembly Method :: AllPathsLG v. 41070; Atlas Link v. 1.0;\n Atlas GapFill v. 2.0; PBJelly2 v. 14.9.9;\n Lachesis v. shendurelab-LACHESIS-2151de9;\n BioNano IrysSolve v. 2.1\nPolishing Method :: Pilon v 1.18\nAssembly Name :: Mmur_3.0\nGenome Coverage :: 221.6x\nSequencing Technology :: Illumina; PacBio RS; PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Microcebus murinus Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 12810044
topology: linear
so has quality: SO_0000987
location: 1..12810044
location: region:1-12810044:1
RO_0002162: 30608

NC_033689
type: RefSeq
SIO_000068: refseq

PRJNA285159
type: BioProject
SIO_000068: bioproject

SAMN06275470
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12810044:1
position: 12810044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-12810044:1:source
so part of: sequence
organism: Microcebus murinus
mol type: genomic DNA
isolate: mixed
chromosome: 30
sex: pooled male and female
tissue type: liver; kidney
note: three separate animals were used in this assembly: #8(Reference animal), 1886F (Citronella), 7006M (Rosehip)

30608
type: Taxonomy
SIO_000068: taxonomy

LOC105885377
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105885377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 128170..157597
location: region:128170-157597:1
so has part: feature:128170-157597:1:exon
subclass of: SO_0000011

105885377
type: Gene
SIO_000068: ncbigene

position:128170:1
position: 128170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157597:1
position: 157597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128170-157597:1:exon

LOC105885377
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105885377
product: uncharacterized LOC105885377
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001160655.1
SIO_010081: LOC105885377
subclass of: SO_0000673
so part of: LOC105885377
location: join(128170..128338,151417..151516,157383..157597)
location: region:128170-157597:1
so has part: feature:128170-128338:1:exon
so has part: feature:151417-151516:1:exon
so has part: feature:157383-157597:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128170-128338:1:exon

position:128338:1
position: 128338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:151417-151516:1:exon

position:151417:1
position: 151417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151516:1
position: 151516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:157383-157597:1:exon

position:157383:1
position: 157383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105862203
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105862203
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(709794..723491)
location: region:709794-723491:-1
so has part: feature:709794-723491:-1:exon
subclass of: SO_0000011

105862203
type: Gene
SIO_000068: ncbigene

position:709794:-1
position: 709794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723491:-1
position: 723491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709794-723491:-1:exon

LOC105862203
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105862203
product: uncharacterized LOC105862203
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001149943.1
SIO_010081: LOC105862203
subclass of: SO_0000673
so part of: LOC105862203
location: complement(join(709794..710178,721433..721505,723433..723491))
location: region:709794-723491:-1
so has part: feature:723433-723491:-1:exon
so has part: feature:721433-721505:-1:exon
so has part: feature:709794-710178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:723433-723491:-1:exon

position:723433:-1
position: 723433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:721433-721505:-1:exon

position:721433:-1
position: 721433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721505:-1
position: 721505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:709794-710178:-1:exon

position:710178:-1
position: 710178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105862210
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105862210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1407931..1433344)
location: region:1407931-1433344:-1
so has part: feature:1407931-1433344:-1:exon
subclass of: SO_0000011

105862210
type: Gene
SIO_000068: ncbigene

position:1407931:-1
position: 1407931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433344:-1
position: 1433344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1407931-1433344:-1:exon

LOC105862210
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105862210
product: uncharacterized LOC105862210, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001149952.1
SIO_010081: LOC105862210
subclass of: SO_0000673
so part of: LOC105862210
location: complement(join(1407931..1408118,1417009..1417141,1433265..1433344))
location: region:1407931-1433344:-1
so has part: feature:1433265-1433344:-1:exon
so has part: feature:1417009-1417141:-1:exon
so has part: feature:1407931-1408118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1433265-1433344:-1:exon

position:1433265:-1
position: 1433265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1417009-1417141:-1:exon

position:1417009:-1
position: 1417009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1417141:-1
position: 1417141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1407931-1408118:-1:exon

position:1408118:-1
position: 1408118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105862210
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105862210
product: uncharacterized LOC105862210, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001149951.1
SIO_010081: LOC105862210
subclass of: SO_0000673
so part of: LOC105862210
location: complement(join(1414822..1415537,1417009..1417141,1433265..1433344))
location: region:1414822-1433344:-1
so has part: feature:1433265-1433344:-1:exon
so has part: feature:1417009-1417141:-1:exon
so has part: feature:1414822-1415537:-1:exon

position:1414822:-1
position: 1414822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433265-1433344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417009-1417141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1414822-1415537:-1:exon

position:1415537:-1
position: 1415537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105862208
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105862208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1884373..1885226
location: region:1884373-1885226:1
so has part: feature:1884373-1885226:1:exon

105862208
type: Gene
SIO_000068: ncbigene

position:1884373:1
position: 1884373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1885226:1
position: 1885226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1884373-1885226:1:exon

LOC105862208
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105862208
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105862208
subclass of: SO_0000673
so part of: LOC105862208
location: 1884373..1885226
location: region:1884373-1885226:1
so has part: feature:1884373-1885226:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1884373-1885226:1:exon

LOC105862195
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105862195
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1889297..1890875
location: region:1889297-1890875:1
so has part: feature:1889297-1890875:1:exon

105862195
type: Gene
SIO_000068: ncbigene

position:1889297:1
position: 1889297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1890875:1
position: 1890875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1889297-1890875:1:exon

LOC105862195
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105862195
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105862195
subclass of: SO_0000673
so part of: LOC105862195
location: 1889297..1890002
location: region:1889297-1890002:1
so has part: feature:1889297-1890002:1:exon

position:1890002:1
position: 1890002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1889297-1890002:1:exon

LOC105862195
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105862195
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105862195
subclass of: SO_0000673
so part of: LOC105862195
location: 1890817..1890875
location: region:1890817-1890875:1
so has part: feature:1890817-1890875:1:exon

position:1890817:1
position: 1890817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1890817-1890875:1:exon

LOC105862205
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105862205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2074728..2145579
location: region:2074728-2145579:1
so has part: feature:2074728-2145579:1:exon
subclass of: SO_0000011

105862205
type: Gene
SIO_000068: ncbigene

position:2074728:1
position: 2074728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2145579:1
position: 2145579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2074728-2145579:1:exon

LOC105862205
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105862205
product: uncharacterized LOC105862205, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222888.1
SIO_010081: LOC105862205
subclass of: SO_0000673
so part of: LOC105862205
location: join(2074728..2074870,2091242..2091361,2093912..2094012,2094698..2094878,2107636..2107715,2108920..2109108,2134858..2134983,2141287..2141413,2144702..2145579)
location: region:2074728-2145579:1
so has part: feature:2074728-2074870:1:exon
so has part: feature:2091242-2091361:1:exon
so has part: feature:2093912-2094012:1:exon
so has part: feature:2094698-2094878:1:exon
so has part: feature:2107636-2107715:1:exon
so has part: feature:2108920-2109108:1:exon
so has part: feature:2134858-2134983:1:exon
so has part: feature:2141287-2141413:1:exon
so has part: feature:2144702-2145579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2074728-2074870:1:exon

position:2074870:1
position: 2074870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2091242-2091361:1:exon

position:2091242:1
position: 2091242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2091361:1
position: 2091361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2093912-2094012:1:exon

position:2093912:1
position: 2093912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2094012:1
position: 2094012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2094698-2094878:1:exon

position:2094698:1
position: 2094698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2094878:1
position: 2094878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2107636-2107715:1:exon

position:2107636:1
position: 2107636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2107715:1
position: 2107715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2108920-2109108:1:exon

position:2108920:1
position: 2108920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2109108:1
position: 2109108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2134858-2134983:1:exon

position:2134858:1
position: 2134858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2134983:1
position: 2134983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2141287-2141413:1:exon

position:2141287:1
position: 2141287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2141413:1
position: 2141413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2144702-2145579:1:exon

position:2144702:1
position: 2144702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105862205
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105862205
product: uncharacterized LOC105862205, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222886.1
SIO_010081: LOC105862205
subclass of: SO_0000673
so part of: LOC105862205
location: join(2074728..2074870,2091242..2091361,2093912..2094012,2094698..2094878,2107636..2107715,2108920..2109108,2134858..2134983,2144702..2145579)
location: region:2074728-2145579:1
so has part: feature:2074728-2074870:1:exon
so has part: feature:2091242-2091361:1:exon
so has part: feature:2093912-2094012:1:exon
so has part: feature:2094698-2094878:1:exon
so has part: feature:2107636-2107715:1:exon
so has part: feature:2108920-2109108:1:exon
so has part: feature:2134858-2134983:1:exon
so has part: feature:2144702-2145579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2074728-2074870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2091242-2091361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2093912-2094012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2094698-2094878:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2107636-2107715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2108920-2109108:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2134858-2134983:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2144702-2145579:1:exon

LOC105862205
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105862205
product: uncharacterized LOC105862205, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222887.1
SIO_010081: LOC105862205
subclass of: SO_0000673
so part of: LOC105862205
location: join(2074728..2074870,2091242..2091361,2093912..2094012,2094698..2094878,2107636..2107715,2134858..2134983,2144702..2145579)
location: region:2074728-2145579:1
so has part: feature:2074728-2074870:1:exon
so has part: feature:2091242-2091361:1:exon
so has part: feature:2093912-2094012:1:exon
so has part: feature:2094698-2094878:1:exon
so has part: feature:2107636-2107715:1:exon
so has part: feature:2134858-2134983:1:exon
so has part: feature:2144702-2145579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2074728-2074870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2091242-2091361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2093912-2094012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2094698-2094878:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2107636-2107715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2134858-2134983:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2144702-2145579:1:exon

LOC105862205
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105862205
product: uncharacterized LOC105862205, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222890.1
SIO_010081: LOC105862205
subclass of: SO_0000673
so part of: LOC105862205
location: join(2074728..2074870,2091242..2091361,2093912..2094012,2094722..2094878,2107636..2107715,2108920..2109108,2134858..2134983,2144702..2145579)
location: region:2074728-2145579:1
so has part: feature:2074728-2074870:1:exon
so has part: feature:2091242-2091361:1:exon
so has part: feature:2093912-2094012:1:exon
so has part: feature:2094722-2094878:1:exon
so has part: feature:2107636-2107715:1:exon
so has part: feature:2108920-2109108:1:exon
so has part: feature:2134858-2134983:1:exon
so has part: feature:2144702-2145579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2074728-2074870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2091242-2091361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2093912-2094012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2094722-2094878:1:exon

position:2094722:1
position: 2094722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2107636-2107715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2108920-2109108:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2134858-2134983:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2144702-2145579:1:exon

LOC105862205
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105862205
product: uncharacterized LOC105862205, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222889.1
SIO_010081: LOC105862205
subclass of: SO_0000673
so part of: LOC105862205
location: join(2074728..2074870,2091242..2091361,2093912..2094012,2094698..2094878,2107636..2107715,2108920..2109108,2134858..2134983,2136824..2136876)
location: region:2074728-2136876:1
so has part: feature:2074728-2074870:1:exon
so has part: feature:2091242-2091361:1:exon
so has part: feature:2093912-2094012:1:exon
so has part: feature:2094698-2094878:1:exon
so has part: feature:2107636-2107715:1:exon
so has part: feature:2108920-2109108:1:exon
so has part: feature:2134858-2134983:1:exon
so has part: feature:2136824-2136876:1:exon

position:2136876:1
position: 2136876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2074728-2074870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2091242-2091361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2093912-2094012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2094698-2094878:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2107636-2107715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2108920-2109108:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2134858-2134983:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2136824-2136876:1:exon

position:2136824:1
position: 2136824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105862207
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105862207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2113007..2122577)
location: region:2113007-2122577:-1
so has part: feature:2113007-2122577:-1:exon
subclass of: SO_0000011

105862207
type: Gene
SIO_000068: ncbigene

position:2113007:-1
position: 2113007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2122577:-1
position: 2122577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2113007-2122577:-1:exon

LOC105862207
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105862207
product: uncharacterized LOC105862207
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001149948.1
SIO_010081: LOC105862207
subclass of: SO_0000673
so part of: LOC105862207
location: complement(join(2113007..2113652,2114944..2115803,2121721..2122577))
location: region:2113007-2122577:-1
so has part: feature:2121721-2122577:-1:exon
so has part: feature:2114944-2115803:-1:exon
so has part: feature:2113007-2113652:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2121721-2122577:-1:exon

position:2121721:-1
position: 2121721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2114944-2115803:-1:exon

position:2114944:-1
position: 2114944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2115803:-1
position: 2115803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2113007-2113652:-1:exon

position:2113652:-1
position: 2113652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105862202
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105862202
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2152548..2167445
location: region:2152548-2167445:1
so has part: feature:2152548-2167445:1:exon
subclass of: SO_0000011

105862202
type: Gene
SIO_000068: ncbigene

position:2152548:1
position: 2152548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2167445:1
position: 2167445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2152548-2167445:1:exon

LOC105862202
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105862202
product: uncharacterized LOC105862202
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001149942.2
SIO_010081: LOC105862202
subclass of: SO_0000673
so part of: LOC105862202
location: join(2152548..2152747,2164858..2165771,2167362..2167445)
location: region:2152548-2167445:1
so has part: feature:2152548-2152747:1:exon
so has part: feature:2164858-2165771:1:exon
so has part: feature:2167362-2167445:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2152548-2152747:1:exon

position:2152747:1
position: 2152747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2164858-2165771:1:exon

position:2164858:1
position: 2164858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2165771:1
position: 2165771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2167362-2167445:1:exon

position:2167362:1
position: 2167362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTPRG
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: PTPRG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2169815..2930229
location: region:2169815-2930229:1
so has part: feature:2169815-2930229:1:exon
subclass of: SO_0000010

105862196
type: Gene
SIO_000068: ncbigene

position:2169815:1
position: 2169815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2930229:1
position: 2930229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2169815-2930229:1:exon

PTPRG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PTPRG
product: protein tyrosine phosphatase, receptor type G, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 151 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012748370.2
SIO_010081: PTPRG
subclass of: SO_0000673
so part of: PTPRG
location: join(2169815..2170036,2402019..2402123,2628617..2628796,2639641..2639789,2710145..2710240,2759328..2759394,2781172..2781329,2792292..2792484,2814057..2814241,2818241..2818349,2824212..2824261,2826405..2827191,2841548..2841677,2857001..2857087,2870942..2871033,2882502..2882593,2890459..2890555,2896561..2896643,2896836..2896970,2898102..2898236,2900403..2900575,2902415..2902550,2903122..2903268,2905872..2905965,2906822..2906898,2907373..2907501,2913272..2913418,2914094..2914236,2925101..2925236,2925809..2930229)
location: region:2169815-2930229:1
so has part: feature:2169815-2170036:1:exon
so has part: feature:2402019-2402123:1:exon
so has part: feature:2628617-2628796:1:exon
so has part: feature:2639641-2639789:1:exon
so has part: feature:2710145-2710240:1:exon
so has part: feature:2759328-2759394:1:exon
so has part: feature:2781172-2781329:1:exon
so has part: feature:2792292-2792484:1:exon
so has part: feature:2814057-2814241:1:exon
so has part: feature:2818241-2818349:1:exon
so has part: feature:2824212-2824261:1:exon
so has part: feature:2826405-2827191:1:exon
so has part: feature:2841548-2841677:1:exon
so has part: feature:2857001-2857087:1:exon
so has part: feature:2870942-2871033:1:exon
so has part: feature:2882502-2882593:1:exon
so has part: feature:2890459-2890555:1:exon
so has part: feature:2896561-2896643:1:exon
so has part: feature:2896836-2896970:1:exon
so has part: feature:2898102-2898236:1:exon
so has part: feature:2900403-2900575:1:exon
so has part: feature:2902415-2902550:1:exon
so has part: feature:2903122-2903268:1:exon
so has part: feature:2905872-2905965:1:exon
so has part: feature:2906822-2906898:1:exon
so has part: feature:2907373-2907501:1:exon
so has part: feature:2913272-2913418:1:exon
so has part: feature:2914094-2914236:1:exon
so has part: feature:2925101-2925236:1:exon
so has part: feature:2925809-2930229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2169815-2170036:1:exon

position:2170036:1
position: 2170036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2402019-2402123:1:exon

position:2402019:1
position: 2402019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2402123:1
position: 2402123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2628617-2628796:1:exon

position:2628617:1
position: 2628617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2628796:1
position: 2628796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2639641-2639789:1:exon

position:2639641:1
position: 2639641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2639789:1
position: 2639789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2710145-2710240:1:exon

position:2710145:1
position: 2710145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2710240:1
position: 2710240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2759328-2759394:1:exon

position:2759328:1
position: 2759328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2759394:1
position: 2759394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2781172-2781329:1:exon

position:2781172:1
position: 2781172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2781329:1
position: 2781329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2792292-2792484:1:exon

position:2792292:1
position: 2792292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2792484:1
position: 2792484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2814057-2814241:1:exon

position:2814057:1
position: 2814057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2814241:1
position: 2814241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2818241-2818349:1:exon

position:2818241:1
position: 2818241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2818349:1
position: 2818349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2824212-2824261:1:exon

position:2824212:1
position: 2824212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2824261:1
position: 2824261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2826405-2827191:1:exon

position:2826405:1
position: 2826405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2827191:1
position: 2827191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2841548-2841677:1:exon

position:2841548:1
position: 2841548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2841677:1
position: 2841677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2857001-2857087:1:exon

position:2857001:1
position: 2857001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2857087:1
position: 2857087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2870942-2871033:1:exon

position:2870942:1
position: 2870942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2871033:1
position: 2871033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2882502-2882593:1:exon

position:2882502:1
position: 2882502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2882593:1
position: 2882593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2890459-2890555:1:exon

position:2890459:1
position: 2890459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2890555:1
position: 2890555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2896561-2896643:1:exon

position:2896561:1
position: 2896561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2896643:1
position: 2896643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2896836-2896970:1:exon

position:2896836:1
position: 2896836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2896970:1
position: 2896970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2898102-2898236:1:exon

position:2898102:1
position: 2898102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2898236:1
position: 2898236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2900403-2900575:1:exon

position:2900403:1
position: 2900403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2900575:1
position: 2900575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2902415-2902550:1:exon

position:2902415:1
position: 2902415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2902550:1
position: 2902550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2903122-2903268:1:exon

position:2903122:1
position: 2903122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2903268:1
position: 2903268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2905872-2905965:1:exon

position:2905872:1
position: 2905872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2905965:1
position: 2905965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2906822-2906898:1:exon

position:2906822:1
position: 2906822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2906898:1
position: 2906898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2907373-2907501:1:exon

position:2907373:1
position: 2907373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2907501:1
position: 2907501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2913272-2913418:1:exon

position:2913272:1
position: 2913272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2913418:1
position: 2913418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2914094-2914236:1:exon

position:2914094:1
position: 2914094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2914236:1
position: 2914236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2925101-2925236:1:exon

position:2925101:1
position: 2925101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2925236:1
position: 2925236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2925809-2930229:1:exon

position:2925809:1
position: 2925809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTPRG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PTPRG
product: protein tyrosine phosphatase, receptor type G, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 149 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012748369.1
SIO_010081: PTPRG
subclass of: SO_0000673
so part of: PTPRG
location: join(2169815..2170036,2402019..2402123,2628617..2628796,2639641..2639789,2710145..2710240,2759328..2759394,2781172..2781329,2792292..2792484,2814057..2814241,2818241..2818349,2824212..2824261,2826405..2827191,2841548..2841677,2870942..2871033,2882502..2882593,2890459..2890555,2896561..2896643,2896836..2896970,2898102..2898236,2900403..2900575,2902415..2902550,2903122..2903268,2905872..2905965,2906822..2906898,2907373..2907501,2913272..2913418,2914094..2914236,2925101..2925236,2925809..2930229)
location: region:2169815-2930229:1
so has part: feature:2169815-2170036:1:exon
so has part: feature:2402019-2402123:1:exon
so has part: feature:2628617-2628796:1:exon
so has part: feature:2639641-2639789:1:exon
so has part: feature:2710145-2710240:1:exon
so has part: feature:2759328-2759394:1:exon
so has part: feature:2781172-2781329:1:exon
so has part: feature:2792292-2792484:1:exon
so has part: feature:2814057-2814241:1:exon
so has part: feature:2818241-2818349:1:exon
so has part: feature:2824212-2824261:1:exon
so has part: feature:2826405-2827191:1:exon
so has part: feature:2841548-2841677:1:exon
so has part: feature:2870942-2871033:1:exon
so has part: feature:2882502-2882593:1:exon
so has part: feature:2890459-2890555:1:exon
so has part: feature:2896561-2896643:1:exon
so has part: feature:2896836-2896970:1:exon
so has part: feature:2898102-2898236:1:exon
so has part: feature:2900403-2900575:1:exon
so has part: feature:2902415-2902550:1:exon
so has part: feature:2903122-2903268:1:exon
so has part: feature:2905872-2905965:1:exon
so has part: feature:2906822-2906898:1:exon
so has part: feature:2907373-2907501:1:exon
so has part: feature:2913272-2913418:1:exon
so has part: feature:2914094-2914236:1:exon
so has part: feature:2925101-2925236:1:exon
so has part: feature:2925809-2930229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2169815-2170036:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2402019-2402123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2628617-2628796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2639641-2639789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2710145-2710240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2759328-2759394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2781172-2781329:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2792292-2792484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2814057-2814241:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2818241-2818349:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2824212-2824261:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2826405-2827191:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2841548-2841677:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2870942-2871033:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2882502-2882593:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2890459-2890555:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2896561-2896643:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2896836-2896970:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2898102-2898236:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2900403-2900575:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2902415-2902550:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2903122-2903268:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2905872-2905965:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2906822-2906898:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2907373-2907501:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2913272-2913418:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2914094-2914236:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2925101-2925236:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2925809-2930229:1:exon

PTPRG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PTPRG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase gamma isoform X1
translation: MRRLLEPCWWILFLKITSSVLHYVVCFPALTEGYTGALHENRHGSSVQIRRRKASGDPYWAYSGAYGPEHWVTSSVSCGGRHQSPIDILDQHARVGEEYQELQLDGFDNESSNKTWMKNTGKTVAILLKDDYFVSGAGLPGRFKAEKVEFHWGHSNGSAGSEHSINGRRFPVEMQIFFYNPDDFDSFQTAISENRIIGAMAIFFQVSPRDNSALDPIIHGLKGVVHHEKETFLDPFVLRDLLPASLGSYYRYTGSLTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLRNNFRPQQDLNNRVVSKSAVRDAWNHDMTDFLENPLGTEASKVCSSPPVHMKVQPLNQTALQVSWSQPETVYHPPIMNYMISYSWTKNEDEKEKTFTKDSDKDLKATISHVSPDSLYLFRVQAVCRNDMRSDFSQTMLFQANTTRIFQGTRIVKTGVPTVSPASSADMAPISSGSSTWTSSGIPFSFVSMATGMGPSSSGSQATVASVVTSTLLAGLGFGGGGISSFPSTVWPTRLPTAAAASKQAGRPVLATTEAAASPGPDNDSAPTKDGEGAEDGGGKDEKGESEDGEREHEEDSDKDSEKKEKGAVTQATEERTQAEPSPTAASPSRTAQDGGHQTIPGRGPAHTPAVPTDWPGGRRDAGPGLGPGSVTSTQVPATATEEQFTAGDPRRPEAPSKKPASRGDRFSEDSRFITVNPEKNTSGMISRPAPGRMEWIIPLIVVSALTFVCLVLLIAVLVYWRGCNKIKSKGFPRRFREVPSSGETGEKGSRKCFQTAHFYVEDSNSPRVVPNESIPIIPIPDDMEAIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNAGVIIMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKVHACYTVRRFSVRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARTPDMGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNILGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLHSYVNSILIPGVGGKTRLEKQFKLVTQCNAKYVECFSAQKECNKEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQSLAEDEFVYWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEALTRDGPTIVHDEYGAVSAGTLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFVYKAMLSLVSTKENGNGPMTVDRNGAVLIADESDPAESMESLV
SIO_010081: PTPRG
subclass of: SO_0000673
so part of: PTPRG
location: join(2169952..2170036,2402019..2402123,2628617..2628796,2639641..2639789,2710145..2710240,2759328..2759394,2781172..2781329,2792292..2792484,2814057..2814241,2818241..2818349,2824212..2824261,2826405..2827191,2841548..2841677,2857001..2857087,2870942..2871033,2882502..2882593,2890459..2890555,2896561..2896643,2896836..2896970,2898102..2898236,2900403..2900575,2902415..2902550,2903122..2903268,2905872..2905965,2906822..2906898,2907373..2907501,2913272..2913418,2914094..2914236,2925101..2925236,2925809..2925955)
location: region:2169952-2925955:1
so has part: feature:2169952-2170036:1:exon
so has part: feature:2402019-2402123:1:exon
so has part: feature:2628617-2628796:1:exon
so has part: feature:2639641-2639789:1:exon
so has part: feature:2710145-2710240:1:exon
so has part: feature:2759328-2759394:1:exon
so has part: feature:2781172-2781329:1:exon
so has part: feature:2792292-2792484:1:exon
so has part: feature:2814057-2814241:1:exon
so has part: feature:2818241-2818349:1:exon
so has part: feature:2824212-2824261:1:exon
so has part: feature:2826405-2827191:1:exon
so has part: feature:2841548-2841677:1:exon
so has part: feature:2857001-2857087:1:exon
so has part: feature:2870942-2871033:1:exon
so has part: feature:2882502-2882593:1:exon
so has part: feature:2890459-2890555:1:exon
so has part: feature:2896561-2896643:1:exon
so has part: feature:2896836-2896970:1:exon
so has part: feature:2898102-2898236:1:exon
so has part: feature:2900403-2900575:1:exon
so has part: feature:2902415-2902550:1:exon
so has part: feature:2903122-2903268:1:exon
so has part: feature:2905872-2905965:1:exon
so has part: feature:2906822-2906898:1:exon
so has part: feature:2907373-2907501:1:exon
so has part: feature:2913272-2913418:1:exon
so has part: feature:2914094-2914236:1:exon
so has part: feature:2925101-2925236:1:exon
so has part: feature:2925809-2925955:1:exon

XP_012603824.1
type: Protein
SIO_000068: ncbiprotein

position:2169952:1
position: 2169952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2925955:1
position: 2925955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2169952-2170036:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2402019-2402123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2628617-2628796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2639641-2639789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2710145-2710240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2759328-2759394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2781172-2781329:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2792292-2792484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2814057-2814241:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2818241-2818349:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2824212-2824261:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2826405-2827191:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2841548-2841677:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2857001-2857087:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2870942-2871033:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2882502-2882593:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2890459-2890555:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2896561-2896643:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2896836-2896970:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2898102-2898236:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2900403-2900575:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2902415-2902550:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2903122-2903268:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2905872-2905965:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2906822-2906898:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2907373-2907501:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2913272-2913418:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2914094-2914236:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2925101-2925236:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2925809-2925955:1:exon

PTPRG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PTPRG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase gamma isoform X2
translation: MRRLLEPCWWILFLKITSSVLHYVVCFPALTEGYTGALHENRHGSSVQIRRRKASGDPYWAYSGAYGPEHWVTSSVSCGGRHQSPIDILDQHARVGEEYQELQLDGFDNESSNKTWMKNTGKTVAILLKDDYFVSGAGLPGRFKAEKVEFHWGHSNGSAGSEHSINGRRFPVEMQIFFYNPDDFDSFQTAISENRIIGAMAIFFQVSPRDNSALDPIIHGLKGVVHHEKETFLDPFVLRDLLPASLGSYYRYTGSLTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLRNNFRPQQDLNNRVVSKSAVRDAWNHDMTDFLENPLGTEASKVCSSPPVHMKVQPLNQTALQVSWSQPETVYHPPIMNYMISYSWTKNEDEKEKTFTKDSDKDLKATISHVSPDSLYLFRVQAVCRNDMRSDFSQTMLFQANTTRIFQGTRIVKTGVPTVSPASSADMAPISSGSSTWTSSGIPFSFVSMATGMGPSSSGSQATVASVVTSTLLAGLGFGGGGISSFPSTVWPTRLPTAAAASKQAGRPVLATTEAAASPGPDNDSAPTKDGEGAEDGGGKDEKGESEDGEREHEEDSDKDSEKKEKGAVTQATEERTQAEPSPTAASPSRTAQDGGHQTIPGRGPAHTPAVPTDWPGGRRDAGPGLGPGSVTSTQVPATATEEQFTAGDPRRPEAPSKKPASRGDRFSEDSRFITVNPEKNTSGMISRPAPGRMEWIIPLIVVSALTFVCLVLLIAVLVYWRKCFQTAHFYVEDSNSPRVVPNESIPIIPIPDDMEAIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNAGVIIMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKVHACYTVRRFSVRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARTPDMGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNILGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLHSYVNSILIPGVGGKTRLEKQFKLVTQCNAKYVECFSAQKECNKEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQSLAEDEFVYWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEALTRDGPTIVHDEYGAVSAGTLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFVYKAMLSLVSTKENGNGPMTVDRNGAVLIADESDPAESMESLV
SIO_010081: PTPRG
subclass of: SO_0000673
so part of: PTPRG
location: join(2169952..2170036,2402019..2402123,2628617..2628796,2639641..2639789,2710145..2710240,2759328..2759394,2781172..2781329,2792292..2792484,2814057..2814241,2818241..2818349,2824212..2824261,2826405..2827191,2841548..2841677,2870942..2871033,2882502..2882593,2890459..2890555,2896561..2896643,2896836..2896970,2898102..2898236,2900403..2900575,2902415..2902550,2903122..2903268,2905872..2905965,2906822..2906898,2907373..2907501,2913272..2913418,2914094..2914236,2925101..2925236,2925809..2925955)
location: region:2169952-2925955:1
so has part: feature:2169952-2170036:1:exon
so has part: feature:2402019-2402123:1:exon
so has part: feature:2628617-2628796:1:exon
so has part: feature:2639641-2639789:1:exon
so has part: feature:2710145-2710240:1:exon
so has part: feature:2759328-2759394:1:exon
so has part: feature:2781172-2781329:1:exon
so has part: feature:2792292-2792484:1:exon
so has part: feature:2814057-2814241:1:exon
so has part: feature:2818241-2818349:1:exon
so has part: feature:2824212-2824261:1:exon
so has part: feature:2826405-2827191:1:exon
so has part: feature:2841548-2841677:1:exon
so has part: feature:2870942-2871033:1:exon
so has part: feature:2882502-2882593:1:exon
so has part: feature:2890459-2890555:1:exon
so has part: feature:2896561-2896643:1:exon
so has part: feature:2896836-2896970:1:exon
so has part: feature:2898102-2898236:1:exon
so has part: feature:2900403-2900575:1:exon
so has part: feature:2902415-2902550:1:exon
so has part: feature:2903122-2903268:1:exon
so has part: feature:2905872-2905965:1:exon
so has part: feature:2906822-2906898:1:exon
so has part: feature:2907373-2907501:1:exon
so has part: feature:2913272-2913418:1:exon
so has part: feature:2914094-2914236:1:exon
so has part: feature:2925101-2925236:1:exon
so has part: feature:2925809-2925955:1:exon

XP_012603823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2169952-2170036:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2402019-2402123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2628617-2628796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2639641-2639789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2710145-2710240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2759328-2759394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2781172-2781329:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2792292-2792484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2814057-2814241:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2818241-2818349:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2824212-2824261:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2826405-2827191:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2841548-2841677:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2870942-2871033:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2882502-2882593:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2890459-2890555:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2896561-2896643:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2896836-2896970:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2898102-2898236:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2900403-2900575:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2902415-2902550:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2903122-2903268:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2905872-2905965:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2906822-2906898:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2907373-2907501:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2913272-2913418:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2914094-2914236:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2925101-2925236:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2925809-2925955:1:exon

PTPRG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PTPRG
product: protein tyrosine phosphatase, receptor type G, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 150 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012748371.2
SIO_010081: PTPRG
subclass of: SO_0000673
so part of: PTPRG
location: join(2269905..2270242,2402019..2402123,2628617..2628796,2639641..2639789,2710145..2710240,2759328..2759394,2781172..2781329,2792292..2792484,2814057..2814241,2818241..2818349,2824212..2824261,2826405..2827191,2841548..2841677,2857001..2857087,2870942..2871033,2882502..2882593,2890459..2890555,2896561..2896643,2896836..2896970,2898102..2898236,2900403..2900575,2902415..2902550,2903122..2903268,2905872..2905965,2906822..2906898,2907373..2907501,2913272..2913418,2914094..2914236,2925101..2925236,2925809..2930229)
location: region:2269905-2930229:1
so has part: feature:2269905-2270242:1:exon
so has part: feature:2402019-2402123:1:exon
so has part: feature:2628617-2628796:1:exon
so has part: feature:2639641-2639789:1:exon
so has part: feature:2710145-2710240:1:exon
so has part: feature:2759328-2759394:1:exon
so has part: feature:2781172-2781329:1:exon
so has part: feature:2792292-2792484:1:exon
so has part: feature:2814057-2814241:1:exon
so has part: feature:2818241-2818349:1:exon
so has part: feature:2824212-2824261:1:exon
so has part: feature:2826405-2827191:1:exon
so has part: feature:2841548-2841677:1:exon
so has part: feature:2857001-2857087:1:exon
so has part: feature:2870942-2871033:1:exon
so has part: feature:2882502-2882593:1:exon
so has part: feature:2890459-2890555:1:exon
so has part: feature:2896561-2896643:1:exon
so has part: feature:2896836-2896970:1:exon
so has part: feature:2898102-2898236:1:exon
so has part: feature:2900403-2900575:1:exon
so has part: feature:2902415-2902550:1:exon
so has part: feature:2903122-2903268:1:exon
so has part: feature:2905872-2905965:1:exon
so has part: feature:2906822-2906898:1:exon
so has part: feature:2907373-2907501:1:exon
so has part: feature:2913272-2913418:1:exon
so has part: feature:2914094-2914236:1:exon
so has part: feature:2925101-2925236:1:exon
so has part: feature:2925809-2930229:1:exon

position:2269905:1
position: 2269905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2269905-2270242:1:exon

position:2270242:1
position: 2270242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2402019-2402123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2628617-2628796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2639641-2639789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2710145-2710240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2759328-2759394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2781172-2781329:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2792292-2792484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2814057-2814241:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2818241-2818349:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2824212-2824261:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2826405-2827191:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2841548-2841677:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2857001-2857087:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2870942-2871033:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2882502-2882593:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2890459-2890555:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2896561-2896643:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2896836-2896970:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2898102-2898236:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2900403-2900575:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2902415-2902550:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2903122-2903268:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2905872-2905965:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2906822-2906898:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2907373-2907501:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2913272-2913418:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2914094-2914236:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2925101-2925236:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2925809-2930229:1:exon

LOC105862198
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105862198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2505998..2519065
location: region:2505998-2519065:1
so has part: feature:2505998-2519065:1:exon
subclass of: SO_0000011

105862198
type: Gene
SIO_000068: ncbigene

position:2505998:1
position: 2505998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2519065:1
position: 2519065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2505998-2519065:1:exon

LOC105862198
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105862198
product: uncharacterized LOC105862198
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001149940.2
SIO_010081: LOC105862198
subclass of: SO_0000673
so part of: LOC105862198
location: join(2505998..2513792,2515365..2519065)
location: region:2505998-2519065:1
so has part: feature:2505998-2513792:1:exon
so has part: feature:2515365-2519065:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2505998-2513792:1:exon

position:2513792:1
position: 2513792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2515365-2519065:1:exon

position:2515365:1
position: 2515365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTPRG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PTPRG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase gamma isoform X3
translation: MKNTGKTVAILLKDDYFVSGAGLPGRFKAEKVEFHWGHSNGSAGSEHSINGRRFPVEMQIFFYNPDDFDSFQTAISENRIIGAMAIFFQVSPRDNSALDPIIHGLKGVVHHEKETFLDPFVLRDLLPASLGSYYRYTGSLTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLRNNFRPQQDLNNRVVSKSAVRDAWNHDMTDFLENPLGTEASKVCSSPPVHMKVQPLNQTALQVSWSQPETVYHPPIMNYMISYSWTKNEDEKEKTFTKDSDKDLKATISHVSPDSLYLFRVQAVCRNDMRSDFSQTMLFQANTTRIFQGTRIVKTGVPTVSPASSADMAPISSGSSTWTSSGIPFSFVSMATGMGPSSSGSQATVASVVTSTLLAGLGFGGGGISSFPSTVWPTRLPTAAAASKQAGRPVLATTEAAASPGPDNDSAPTKDGEGAEDGGGKDEKGESEDGEREHEEDSDKDSEKKEKGAVTQATEERTQAEPSPTAASPSRTAQDGGHQTIPGRGPAHTPAVPTDWPGGRRDAGPGLGPGSVTSTQVPATATEEQFTAGDPRRPEAPSKKPASRGDRFSEDSRFITVNPEKNTSGMISRPAPGRMEWIIPLIVVSALTFVCLVLLIAVLVYWRGCNKIKSKGFPRRFREVPSSGETGEKGSRKCFQTAHFYVEDSNSPRVVPNESIPIIPIPDDMEAIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNAGVIIMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKVHACYTVRRFSVRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARTPDMGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNILGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLHSYVNSILIPGVGGKTRLEKQFKLVTQCNAKYVECFSAQKECNKEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQSLAEDEFVYWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEALTRDGPTIVHDEYGAVSAGTLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFVYKAMLSLVSTKENGNGPMTVDRNGAVLIADESDPAESMESLV
SIO_010081: PTPRG
subclass of: SO_0000673
so part of: PTPRG
location: join(2628775..2628796,2639641..2639789,2710145..2710240,2759328..2759394,2781172..2781329,2792292..2792484,2814057..2814241,2818241..2818349,2824212..2824261,2826405..2827191,2841548..2841677,2857001..2857087,2870942..2871033,2882502..2882593,2890459..2890555,2896561..2896643,2896836..2896970,2898102..2898236,2900403..2900575,2902415..2902550,2903122..2903268,2905872..2905965,2906822..2906898,2907373..2907501,2913272..2913418,2914094..2914236,2925101..2925236,2925809..2925955)
location: region:2628775-2925955:1
so has part: feature:2628775-2628796:1:exon
so has part: feature:2639641-2639789:1:exon
so has part: feature:2710145-2710240:1:exon
so has part: feature:2759328-2759394:1:exon
so has part: feature:2781172-2781329:1:exon
so has part: feature:2792292-2792484:1:exon
so has part: feature:2814057-2814241:1:exon
so has part: feature:2818241-2818349:1:exon
so has part: feature:2824212-2824261:1:exon
so has part: feature:2826405-2827191:1:exon
so has part: feature:2841548-2841677:1:exon
so has part: feature:2857001-2857087:1:exon
so has part: feature:2870942-2871033:1:exon
so has part: feature:2882502-2882593:1:exon
so has part: feature:2890459-2890555:1:exon
so has part: feature:2896561-2896643:1:exon
so has part: feature:2896836-2896970:1:exon
so has part: feature:2898102-2898236:1:exon
so has part: feature:2900403-2900575:1:exon
so has part: feature:2902415-2902550:1:exon
so has part: feature:2903122-2903268:1:exon
so has part: feature:2905872-2905965:1:exon
so has part: feature:2906822-2906898:1:exon
so has part: feature:2907373-2907501:1:exon
so has part: feature:2913272-2913418:1:exon
so has part: feature:2914094-2914236:1:exon
so has part: feature:2925101-2925236:1:exon
so has part: feature:2925809-2925955:1:exon

XP_012603825.1
type: Protein
SIO_000068: ncbiprotein

position:2628775:1
position: 2628775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2628775-2628796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2639641-2639789:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2710145-2710240:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2759328-2759394:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2781172-2781329:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2792292-2792484:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2814057-2814241:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2818241-2818349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2824212-2824261:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2826405-2827191:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2841548-2841677:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2857001-2857087:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2870942-2871033:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2882502-2882593:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2890459-2890555:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2896561-2896643:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2896836-2896970:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2898102-2898236:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2900403-2900575:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2902415-2902550:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2903122-2903268:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2905872-2905965:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2906822-2906898:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2907373-2907501:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2913272-2913418:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2914094-2914236:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2925101-2925236:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2925809-2925955:1:exon

PTPRG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PTPRG
product: protein tyrosine phosphatase, receptor type G, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 148 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012748372.2
SIO_010081: PTPRG
subclass of: SO_0000673
so part of: PTPRG
location: join(2650714..2650790,2710145..2710240,2759328..2759394,2781172..2781329,2792292..2792484,2814057..2814241,2818241..2818349,2824212..2824261,2826405..2827191,2841548..2841677,2857001..2857087,2870942..2871033,2882502..2882593,2890459..2890555,2896561..2896643,2896836..2896970,2898102..2898236,2900403..2900575,2902415..2902550,2903122..2903268,2905872..2905965,2906822..2906898,2907373..2907501,2913272..2913418,2914094..2914236,2925101..2925236,2925809..2930229)
location: region:2650714-2930229:1
so has part: feature:2650714-2650790:1:exon
so has part: feature:2710145-2710240:1:exon
so has part: feature:2759328-2759394:1:exon
so has part: feature:2781172-2781329:1:exon
so has part: feature:2792292-2792484:1:exon
so has part: feature:2814057-2814241:1:exon
so has part: feature:2818241-2818349:1:exon
so has part: feature:2824212-2824261:1:exon
so has part: feature:2826405-2827191:1:exon
so has part: feature:2841548-2841677:1:exon
so has part: feature:2857001-2857087:1:exon
so has part: feature:2870942-2871033:1:exon
so has part: feature:2882502-2882593:1:exon
so has part: feature:2890459-2890555:1:exon
so has part: feature:2896561-2896643:1:exon
so has part: feature:2896836-2896970:1:exon
so has part: feature:2898102-2898236:1:exon
so has part: feature:2900403-2900575:1:exon
so has part: feature:2902415-2902550:1:exon
so has part: feature:2903122-2903268:1:exon
so has part: feature:2905872-2905965:1:exon
so has part: feature:2906822-2906898:1:exon
so has part: feature:2907373-2907501:1:exon
so has part: feature:2913272-2913418:1:exon
so has part: feature:2914094-2914236:1:exon
so has part: feature:2925101-2925236:1:exon
so has part: feature:2925809-2930229:1:exon

position:2650714:1
position: 2650714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2650714-2650790:1:exon

position:2650790:1
position: 2650790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2710145-2710240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2759328-2759394:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2781172-2781329:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2792292-2792484:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2814057-2814241:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2818241-2818349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2824212-2824261:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2826405-2827191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2841548-2841677:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2857001-2857087:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2870942-2871033:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2882502-2882593:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2890459-2890555:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2896561-2896643:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2896836-2896970:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2898102-2898236:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2900403-2900575:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2902415-2902550:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2903122-2903268:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2905872-2905965:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2906822-2906898:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2907373-2907501:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2913272-2913418:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2914094-2914236:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2925101-2925236:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2925809-2930229:1:exon

PTPRG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PTPRG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase gamma isoform X4
translation: MQIFFYNPDDFDSFQTAISENRIIGAMAIFFQVSPRDNSALDPIIHGLKGVVHHEKETFLDPFVLRDLLPASLGSYYRYTGSLTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLRNNFRPQQDLNNRVVSKSAVRDAWNHDMTDFLENPLGTEASKVCSSPPVHMKVQPLNQTALQVSWSQPETVYHPPIMNYMISYSWTKNEDEKEKTFTKDSDKDLKATISHVSPDSLYLFRVQAVCRNDMRSDFSQTMLFQANTTRIFQGTRIVKTGVPTVSPASSADMAPISSGSSTWTSSGIPFSFVSMATGMGPSSSGSQATVASVVTSTLLAGLGFGGGGISSFPSTVWPTRLPTAAAASKQAGRPVLATTEAAASPGPDNDSAPTKDGEGAEDGGGKDEKGESEDGEREHEEDSDKDSEKKEKGAVTQATEERTQAEPSPTAASPSRTAQDGGHQTIPGRGPAHTPAVPTDWPGGRRDAGPGLGPGSVTSTQVPATATEEQFTAGDPRRPEAPSKKPASRGDRFSEDSRFITVNPEKNTSGMISRPAPGRMEWIIPLIVVSALTFVCLVLLIAVLVYWRGCNKIKSKGFPRRFREVPSSGETGEKGSRKCFQTAHFYVEDSNSPRVVPNESIPIIPIPDDMEAIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNAGVIIMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKVHACYTVRRFSVRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARTPDMGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNILGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLHSYVNSILIPGVGGKTRLEKQFKLVTQCNAKYVECFSAQKECNKEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQSLAEDEFVYWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEALTRDGPTIVHDEYGAVSAGTLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFVYKAMLSLVSTKENGNGPMTVDRNGAVLIADESDPAESMESLV
SIO_010081: PTPRG
subclass of: SO_0000673
so part of: PTPRG
location: join(2710145..2710240,2759328..2759394,2781172..2781329,2792292..2792484,2814057..2814241,2818241..2818349,2824212..2824261,2826405..2827191,2841548..2841677,2857001..2857087,2870942..2871033,2882502..2882593,2890459..2890555,2896561..2896643,2896836..2896970,2898102..2898236,2900403..2900575,2902415..2902550,2903122..2903268,2905872..2905965,2906822..2906898,2907373..2907501,2913272..2913418,2914094..2914236,2925101..2925236,2925809..2925955)
location: region:2710145-2925955:1
so has part: feature:2710145-2710240:1:exon
so has part: feature:2759328-2759394:1:exon
so has part: feature:2781172-2781329:1:exon
so has part: feature:2792292-2792484:1:exon
so has part: feature:2814057-2814241:1:exon
so has part: feature:2818241-2818349:1:exon
so has part: feature:2824212-2824261:1:exon
so has part: feature:2826405-2827191:1:exon
so has part: feature:2841548-2841677:1:exon
so has part: feature:2857001-2857087:1:exon
so has part: feature:2870942-2871033:1:exon
so has part: feature:2882502-2882593:1:exon
so has part: feature:2890459-2890555:1:exon
so has part: feature:2896561-2896643:1:exon
so has part: feature:2896836-2896970:1:exon
so has part: feature:2898102-2898236:1:exon
so has part: feature:2900403-2900575:1:exon
so has part: feature:2902415-2902550:1:exon
so has part: feature:2903122-2903268:1:exon
so has part: feature:2905872-2905965:1:exon
so has part: feature:2906822-2906898:1:exon
so has part: feature:2907373-2907501:1:exon
so has part: feature:2913272-2913418:1:exon
so has part: feature:2914094-2914236:1:exon
so has part: feature:2925101-2925236:1:exon
so has part: feature:2925809-2925955:1:exon

XP_012603826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2710145-2710240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2759328-2759394:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2781172-2781329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2792292-2792484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2814057-2814241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2818241-2818349:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2824212-2824261:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2826405-2827191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2841548-2841677:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2857001-2857087:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2870942-2871033:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2882502-2882593:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2890459-2890555:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2896561-2896643:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2896836-2896970:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2898102-2898236:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2900403-2900575:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2902415-2902550:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2903122-2903268:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2905872-2905965:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2906822-2906898:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2907373-2907501:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2913272-2913418:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2914094-2914236:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2925101-2925236:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2925809-2925955:1:exon

LOC105862199
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105862199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2906668..2989147)
location: region:2906668-2989147:-1
so has part: feature:2906668-2989147:-1:exon
subclass of: SO_0000011

105862199
type: Gene
SIO_000068: ncbigene

position:2906668:-1
position: 2906668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2989147:-1
position: 2989147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2906668-2989147:-1:exon

LOC105862199
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105862199
product: uncharacterized LOC105862199, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001149941.2
SIO_010081: LOC105862199
subclass of: SO_0000673
so part of: LOC105862199
location: complement(join(2906668..2906854,2924922..2924977,2927370..2927448,2989026..2989147))
location: region:2906668-2989147:-1
so has part: feature:2989026-2989147:-1:exon
so has part: feature:2927370-2927448:-1:exon
so has part: feature:2924922-2924977:-1:exon
so has part: feature:2906668-2906854:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2989026-2989147:-1:exon

position:2989026:-1
position: 2989026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2927370-2927448:-1:exon

position:2927370:-1
position: 2927370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2927448:-1
position: 2927448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2924922-2924977:-1:exon

position:2924922:-1
position: 2924922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2924977:-1
position: 2924977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2906668-2906854:-1:exon

position:2906854:-1
position: 2906854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105862199
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105862199
product: uncharacterized LOC105862199, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222884.1
SIO_010081: LOC105862199
subclass of: SO_0000673
so part of: LOC105862199
location: complement(join(2906668..2906854,2924922..2924977,2927370..2927448,2942869..2943160))
location: region:2906668-2943160:-1
so has part: feature:2942869-2943160:-1:exon
so has part: feature:2927370-2927448:-1:exon
so has part: feature:2924922-2924977:-1:exon
so has part: feature:2906668-2906854:-1:exon

position:2943160:-1
position: 2943160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2942869-2943160:-1:exon

position:2942869:-1
position: 2942869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2927370-2927448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2924922-2924977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2906668-2906854:-1:exon

C30H3orf14
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: C30H3orf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2947475..2964797
location: region:2947475-2964797:1
so has part: feature:2947475-2964797:1:exon
subclass of: SO_0000010

105862197
type: Gene
SIO_000068: ncbigene

position:2947475:1
position: 2947475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2964797:1
position: 2964797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2947475-2964797:1:exon

C30H3orf14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: C30H3orf14
product: chromosome 30 C3orf14 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012748374.2
SIO_010081: C30H3orf14
subclass of: SO_0000673
so part of: C30H3orf14
location: join(2947475..2947825,2948440..2948523,2949871..2949994,2961438..2961512,2963774..2964797)
location: region:2947475-2964797:1
so has part: feature:2947475-2947825:1:exon
so has part: feature:2948440-2948523:1:exon
so has part: feature:2949871-2949994:1:exon
so has part: feature:2961438-2961512:1:exon
so has part: feature:2963774-2964797:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2947475-2947825:1:exon

position:2947825:1
position: 2947825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2948440-2948523:1:exon

position:2948440:1
position: 2948440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2948523:1
position: 2948523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2949871-2949994:1:exon

position:2949871:1
position: 2949871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2949994:1
position: 2949994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2961438-2961512:1:exon

position:2961438:1
position: 2961438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2961512:1
position: 2961512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2963774-2964797:1:exon

position:2963774:1
position: 2963774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C30H3orf14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: C30H3orf14
product: chromosome 30 C3orf14 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012748373.2
SIO_010081: C30H3orf14
subclass of: SO_0000673
so part of: C30H3orf14
location: join(2947479..2947825,2948443..2948523,2949871..2949994,2961438..2961512,2963774..2964797)
location: region:2947479-2964797:1
so has part: feature:2947479-2947825:1:exon
so has part: feature:2948443-2948523:1:exon
so has part: feature:2949871-2949994:1:exon
so has part: feature:2961438-2961512:1:exon
so has part: feature:2963774-2964797:1:exon

position:2947479:1
position: 2947479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2947479-2947825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2948443-2948523:1:exon

position:2948443:1
position: 2948443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2949871-2949994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2961438-2961512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2963774-2964797:1:exon

C30H3orf14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: C30H3orf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C3orf14 homolog
translation: MTSLFVQEIRLSKRHEEIVSQRLMLLQQMENKCGDQNTEKASQLKAAETAFKRNLSLLKDIEAAEKSLETRIHPIPRPEVVSLETRYWASVEEHIPKWEQFLLGRAPYPIDVENQNEAEKSIQNEAQQ
SIO_010081: C30H3orf14
subclass of: SO_0000673
so part of: C30H3orf14
location: join(2948471..2948523,2949871..2949994,2961438..2961512,2963774..2963908)
location: region:2948471-2963908:1
so has part: feature:2948471-2948523:1:exon
so has part: feature:2949871-2949994:1:exon
so has part: feature:2961438-2961512:1:exon
so has part: feature:2963774-2963908:1:exon

XP_012603827.1
type: Protein
SIO_000068: ncbiprotein

position:2948471:1
position: 2948471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2963908:1
position: 2963908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2948471-2948523:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2949871-2949994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2961438-2961512:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2963774-2963908:1:exon

C30H3orf14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: C30H3orf14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C3orf14 homolog
translation: MTSLFVQEIRLSKRHEEIVSQRLMLLQQMENKCGDQNTEKASQLKAAETAFKRNLSLLKDIEAAEKSLETRIHPIPRPEVVSLETRYWASVEEHIPKWEQFLLGRAPYPIDVENQNEAEKSIQNEAQQ
SIO_010081: C30H3orf14
subclass of: SO_0000673
so part of: C30H3orf14
location: join(2948471..2948523,2949871..2949994,2961438..2961512,2963774..2963908)
location: region:2948471-2963908:1
so has part: feature:2948471-2948523:1:exon
so has part: feature:2949871-2949994:1:exon
so has part: feature:2961438-2961512:1:exon
so has part: feature:2963774-2963908:1:exon

XP_012603828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2948471-2948523:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2949871-2949994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2961438-2961512:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2963774-2963908:1:exon

FEZF2
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: FEZF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2996907..3001880)
location: region:2996907-3001880:-1
so has part: feature:2996907-3001880:-1:exon
subclass of: SO_0000010

105862200
type: Gene
SIO_000068: ncbigene

position:2996907:-1
position: 2996907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3001880:-1
position: 3001880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2996907-3001880:-1:exon

FEZF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FEZF2
product: FEZ family zinc finger 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 32 ESTs, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012748375.2
SIO_010081: FEZF2
subclass of: SO_0000673
so part of: FEZF2
location: complement(join(2996907..2997590,2998492..2998624,2998847..2998981,2999324..3000224,3000596..3000732,3001622..3001880))
location: region:2996907-3001880:-1
so has part: feature:3001622-3001880:-1:exon
so has part: feature:3000596-3000732:-1:exon
so has part: feature:2999324-3000224:-1:exon
so has part: feature:2998847-2998981:-1:exon
so has part: feature:2998492-2998624:-1:exon
so has part: feature:2996907-2997590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3001622-3001880:-1:exon

position:3001622:-1
position: 3001622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3000596-3000732:-1:exon

position:3000596:-1
position: 3000596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3000732:-1
position: 3000732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2999324-3000224:-1:exon

position:2999324:-1
position: 2999324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3000224:-1
position: 3000224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2998847-2998981:-1:exon

position:2998847:-1
position: 2998847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2998981:-1
position: 2998981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2998492-2998624:-1:exon

position:2998492:-1
position: 2998492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2998624:-1
position: 2998624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2996907-2997590:-1:exon

position:2997590:-1
position: 2997590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FEZF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FEZF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fez family zinc finger protein 2
translation: MASSASLETMVPPACPRAGASPATSKTLAFSIERIMAKTSEPRAPFEPRPGALEADGSQSKKLLNLCSPLPCMIPLQPLGYEVPSKTLLSYSELWKSSLRAGGGGGGGGGGGGGAPVCGASGLCKTNCGVCCKAELGLAPSALPTGRVIKPQVINQAVGLPASGSLYYFNYLDSAAYPPSELLGGHLFPSGLLNAQAPAALAAHPKLFLLENAKLAGLAADKFPHPAPYPHKERLPAPLEQVLKENSALGAERGGVKGHSKLPGASADGKPKNFTCEVCGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTQEKPHKCNQCGKAFNRSSTLNTHIRIHAGYKPFVCEFCGKGFHQKGNYKNHKLTHSGEKQYKCTICNKAFHQVYNLTFHMHTHNDKKPFTCATCGKGFCRNFDLKKHVRKLHDSVGPAAPSAKDPTRTAQS
SIO_010081: FEZF2
subclass of: SO_0000673
so part of: FEZF2
location: complement(join(2997331..2997590,2998492..2998624,2998847..2998981,2999324..3000166))
location: region:2997331-3000166:-1
so has part: feature:2999324-3000166:-1:exon
so has part: feature:2998847-2998981:-1:exon
so has part: feature:2998492-2998624:-1:exon
so has part: feature:2997331-2997590:-1:exon

XP_012603829.1
type: Protein
SIO_000068: ncbiprotein

position:2997331:-1
position: 2997331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3000166:-1
position: 3000166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2999324-3000166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2998847-2998981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2998492-2998624:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2997331-2997590:-1:exon

CADPS
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: CADPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3030315..3573901)
location: region:3030315-3573901:-1
so has part: feature:3030315-3573901:-1:exon
subclass of: SO_0000010

105862204
type: Gene
SIO_000068: ncbigene

position:3030315:-1
position: 3030315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3573901:-1
position: 3573901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3030315-3573901:-1:exon

CADPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CADPS
product: calcium dependent secretion activator
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 40 ESTs, 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284645.1
SIO_010081: CADPS
subclass of: SO_0000673
so part of: CADPS
location: complement(join(3030315..3031606,3034895..3034999,3081352..3081459,3089156..3089188,3115196..3115279,3116174..3116248,3124252..3124399,3128880..3129035,3132435..3132581,3141841..3141982,3142963..3143119,3149990..3150096,3164011..3164028,3164906..3164974,3166996..3167119,3176105..3176168,3179456..3179557,3194506..3194693,3208734..3208870,3222626..3222838,3227996..3228104,3241182..3241248,3253815..3253954,3271614..3271725,3325266..3325387,3331569..3331802,3348121..3348201,3448097..3448429,3459188..3459301,3572593..3573901))
location: region:3030315-3573901:-1
so has part: feature:3572593-3573901:-1:exon
so has part: feature:3459188-3459301:-1:exon
so has part: feature:3448097-3448429:-1:exon
so has part: feature:3348121-3348201:-1:exon
so has part: feature:3331569-3331802:-1:exon
so has part: feature:3325266-3325387:-1:exon
so has part: feature:3271614-3271725:-1:exon
so has part: feature:3253815-3253954:-1:exon
so has part: feature:3241182-3241248:-1:exon
so has part: feature:3227996-3228104:-1:exon
so has part: feature:3222626-3222838:-1:exon
so has part: feature:3208734-3208870:-1:exon
so has part: feature:3194506-3194693:-1:exon
so has part: feature:3179456-3179557:-1:exon
so has part: feature:3176105-3176168:-1:exon
so has part: feature:3166996-3167119:-1:exon
so has part: feature:3164906-3164974:-1:exon
so has part: feature:3164011-3164028:-1:exon
so has part: feature:3149990-3150096:-1:exon
so has part: feature:3142963-3143119:-1:exon
so has part: feature:3141841-3141982:-1:exon
so has part: feature:3132435-3132581:-1:exon
so has part: feature:3128880-3129035:-1:exon
so has part: feature:3124252-3124399:-1:exon
so has part: feature:3116174-3116248:-1:exon
so has part: feature:3115196-3115279:-1:exon
so has part: feature:3089156-3089188:-1:exon
so has part: feature:3081352-3081459:-1:exon
so has part: feature:3034895-3034999:-1:exon
so has part: feature:3030315-3031606:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3572593-3573901:-1:exon

position:3572593:-1
position: 3572593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3459188-3459301:-1:exon

position:3459188:-1
position: 3459188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3459301:-1
position: 3459301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3448097-3448429:-1:exon

position:3448097:-1
position: 3448097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3448429:-1
position: 3448429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3348121-3348201:-1:exon

position:3348121:-1
position: 3348121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3348201:-1
position: 3348201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3331569-3331802:-1:exon

position:3331569:-1
position: 3331569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3331802:-1
position: 3331802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3325266-3325387:-1:exon

position:3325266:-1
position: 3325266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3325387:-1
position: 3325387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3271614-3271725:-1:exon

position:3271614:-1
position: 3271614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3271725:-1
position: 3271725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3253815-3253954:-1:exon

position:3253815:-1
position: 3253815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3253954:-1
position: 3253954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3241182-3241248:-1:exon

position:3241182:-1
position: 3241182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3241248:-1
position: 3241248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3227996-3228104:-1:exon

position:3227996:-1
position: 3227996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3228104:-1
position: 3228104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3222626-3222838:-1:exon

position:3222626:-1
position: 3222626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3222838:-1
position: 3222838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3208734-3208870:-1:exon

position:3208734:-1
position: 3208734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3208870:-1
position: 3208870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3194506-3194693:-1:exon

position:3194506:-1
position: 3194506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3194693:-1
position: 3194693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3179456-3179557:-1:exon

position:3179456:-1
position: 3179456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3179557:-1
position: 3179557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3176105-3176168:-1:exon

position:3176105:-1
position: 3176105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3176168:-1
position: 3176168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3166996-3167119:-1:exon

position:3166996:-1
position: 3166996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3167119:-1
position: 3167119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3164906-3164974:-1:exon

position:3164906:-1
position: 3164906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3164974:-1
position: 3164974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3164011-3164028:-1:exon

position:3164011:-1
position: 3164011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3164028:-1
position: 3164028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3149990-3150096:-1:exon

position:3149990:-1
position: 3149990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3150096:-1
position: 3150096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3142963-3143119:-1:exon

position:3142963:-1
position: 3142963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3143119:-1
position: 3143119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3141841-3141982:-1:exon

position:3141841:-1
position: 3141841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3141982:-1
position: 3141982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3132435-3132581:-1:exon

position:3132435:-1
position: 3132435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3132581:-1
position: 3132581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3128880-3129035:-1:exon

position:3128880:-1
position: 3128880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3129035:-1
position: 3129035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3124252-3124399:-1:exon

position:3124252:-1
position: 3124252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3124399:-1
position: 3124399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3116174-3116248:-1:exon

position:3116174:-1
position: 3116174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3116248:-1
position: 3116248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3115196-3115279:-1:exon

position:3115196:-1
position: 3115196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3115279:-1
position: 3115279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3089156-3089188:-1:exon

position:3089156:-1
position: 3089156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3089188:-1
position: 3089188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3081352-3081459:-1:exon

position:3081352:-1
position: 3081352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3081459:-1
position: 3081459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3034895-3034999:-1:exon

position:3034895:-1
position: 3034895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3034999:-1
position: 3034999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3030315-3031606:-1:exon

position:3031606:-1
position: 3031606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CADPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CADPS
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: calcium-dependent secretion activator 1
translation: MLDPSSSEEESDEIVEEESGKEVLGSAASGARLSPSRTSEGSAGSAGLGWRAAGAGPGRRRRGGSGGASGFGRGGLQPSSRAGGGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDRVARMVQSGGCSANDSREVFKKHIEKRVRSLPEIDGLSKETVLSSWMAKFDAIYRGEEDPRKQQARMTASAASELILSKEQLYEMFQNILGIKKFEHQLLYNACQLDNPDEQAAQIRRELDGRLQMADQIARERKFPKFVSKEMENTYIEELKSSVNLLMANLESMPVSKGGEFKLQKLKRSHNASIIDMGEESENQLSKSDVVLSFSLEVVIMEVQGLKSLAPNRIVYCTMEVEGGEKLQTDQAEASKPTWGTQGDFSTTHALPAVKVKLFTESTGVLALEDKELGRVILHPTPNSPKQSEWHKMTVSKNCPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQDLLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLNAKGGNVPQLDAPISQFYADRAQKHGMDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERAENGAMIDPTLLHYSFAFCASHVHGNRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKATLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEGKKREMYEHPVFCLASQVMDLTIQNQKDAENVGRLITPAKKLEDTIRLAELVIEVLQQNEEHHAEAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRTDYNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPVKSLTSNLPNVNLPNVNLPRVPNLPVNIPLGIPQMPTFSAPSWMAAIYDVDNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCVKRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLVAKFVTILEGVLAKLSRYDEGTLFSSFLSFTVKAASKYVDVPKPGMDVADAYVTFVRHSQDVLRDKVNEEMYIERLFDQWYNSSMNVICTWLTDRMDLQLHIYQLKTLIRMVKKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEEATASVSEGGGLQGISMKDSDEEDEEDD
SIO_010081: CADPS
subclass of: SO_0000673
so part of: CADPS
location: complement(join(3031427..3031606,3034895..3034999,3081352..3081459,3089156..3089188,3115196..3115279,3116174..3116248,3124252..3124399,3128880..3129035,3132435..3132581,3141841..3141982,3142963..3143119,3149990..3150096,3164011..3164028,3164906..3164974,3166996..3167119,3176105..3176168,3179456..3179557,3194506..3194693,3208734..3208870,3222626..3222838,3227996..3228104,3241182..3241248,3253815..3253954,3271614..3271725,3325266..3325387,3331569..3331802,3348121..3348201,3448097..3448429,3459188..3459301,3572593..3573028))
location: region:3031427-3573028:-1
so has part: feature:3572593-3573028:-1:exon
so has part: feature:3459188-3459301:-1:exon
so has part: feature:3448097-3448429:-1:exon
so has part: feature:3348121-3348201:-1:exon
so has part: feature:3331569-3331802:-1:exon
so has part: feature:3325266-3325387:-1:exon
so has part: feature:3271614-3271725:-1:exon
so has part: feature:3253815-3253954:-1:exon
so has part: feature:3241182-3241248:-1:exon
so has part: feature:3227996-3228104:-1:exon
so has part: feature:3222626-3222838:-1:exon
so has part: feature:3208734-3208870:-1:exon
so has part: feature:3194506-3194693:-1:exon
so has part: feature:3179456-3179557:-1:exon
so has part: feature:3176105-3176168:-1:exon
so has part: feature:3166996-3167119:-1:exon
so has part: feature:3164906-3164974:-1:exon
so has part: feature:3164011-3164028:-1:exon
so has part: feature:3149990-3150096:-1:exon
so has part: feature:3142963-3143119:-1:exon
so has part: feature:3141841-3141982:-1:exon
so has part: feature:3132435-3132581:-1:exon
so has part: feature:3128880-3129035:-1:exon
so has part: feature:3124252-3124399:-1:exon
so has part: feature:3116174-3116248:-1:exon
so has part: feature:3115196-3115279:-1:exon
so has part: feature:3089156-3089188:-1:exon
so has part: feature:3081352-3081459:-1:exon
so has part: feature:3034895-3034999:-1:exon
so has part: feature:3031427-3031606:-1:exon

XP_020140234.1
type: Protein
SIO_000068: ncbiprotein

position:3031427:-1
position: 3031427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3573028:-1
position: 3573028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3572593-3573028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3459188-3459301:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3448097-3448429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3348121-3348201:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3331569-3331802:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3325266-3325387:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3271614-3271725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3253815-3253954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3241182-3241248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3227996-3228104:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3222626-3222838:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3208734-3208870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3194506-3194693:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3179456-3179557:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3176105-3176168:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3166996-3167119:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3164906-3164974:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3164011-3164028:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3149990-3150096:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3142963-3143119:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3141841-3141982:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3132435-3132581:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3128880-3129035:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3124252-3124399:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3116174-3116248:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3115196-3115279:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3089156-3089188:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3081352-3081459:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3034895-3034999:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3031427-3031606:-1:exon

LOC105874273
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105874273
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3716252..3725899)
location: region:3716252-3725899:-1
so has part: feature:3716252-3725899:-1:exon
subclass of: SO_0000011

105874273
type: Gene
SIO_000068: ncbigene

position:3716252:-1
position: 3716252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3725899:-1
position: 3725899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3716252-3725899:-1:exon

LOC105874273
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105874273
product: uncharacterized LOC105874273
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001155439.1
SIO_010081: LOC105874273
subclass of: SO_0000673
so part of: LOC105874273
location: complement(join(3716252..3716298,3725136..3725238,3725757..3725899))
location: region:3716252-3725899:-1
so has part: feature:3725757-3725899:-1:exon
so has part: feature:3725136-3725238:-1:exon
so has part: feature:3716252-3716298:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3725757-3725899:-1:exon

position:3725757:-1
position: 3725757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3725136-3725238:-1:exon

position:3725136:-1
position: 3725136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3725238:-1
position: 3725238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3716252-3716298:-1:exon

position:3716298:-1
position: 3716298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105874269
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105874269
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3813887..3876422)
location: region:3813887-3876422:-1
so has part: feature:3813887-3876422:-1:exon
subclass of: SO_0000011

105874269
type: Gene
SIO_000068: ncbigene

position:3813887:-1
position: 3813887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3876422:-1
position: 3876422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3813887-3876422:-1:exon

LOC105874269
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105874269
product: uncharacterized LOC105874269
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001155438.2
SIO_010081: LOC105874269
subclass of: SO_0000673
so part of: LOC105874269
location: complement(join(3813887..3814271,3868040..3868093,3876346..3876422))
location: region:3813887-3876422:-1
so has part: feature:3876346-3876422:-1:exon
so has part: feature:3868040-3868093:-1:exon
so has part: feature:3813887-3814271:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3876346-3876422:-1:exon

position:3876346:-1
position: 3876346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3868040-3868093:-1:exon

position:3868040:-1
position: 3868040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3868093:-1
position: 3868093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3813887-3814271:-1:exon

position:3814271:-1
position: 3814271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYNPR
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: SYNPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3876635..4126006
location: region:3876635-4126006:1
so has part: feature:3876635-4126006:1:exon
subclass of: SO_0000010

105874268
type: Gene
SIO_000068: ncbigene

position:3876635:1
position: 3876635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4126006:1
position: 4126006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3876635-4126006:1:exon

SYNPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SYNPR
product: synaptoporin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 101 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012769924.2
SIO_010081: SYNPR
subclass of: SO_0000673
so part of: SYNPR
location: join(3876635..3876862,3876994..3877059,4036527..4036651,4082872..4083070,4118342..4118533,4124272..4126006)
location: region:3876635-4126006:1
so has part: feature:3876635-3876862:1:exon
so has part: feature:3876994-3877059:1:exon
so has part: feature:4036527-4036651:1:exon
so has part: feature:4082872-4083070:1:exon
so has part: feature:4118342-4118533:1:exon
so has part: feature:4124272-4126006:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3876635-3876862:1:exon

position:3876862:1
position: 3876862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3876994-3877059:1:exon

position:3876994:1
position: 3876994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3877059:1
position: 3877059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4036527-4036651:1:exon

position:4036527:1
position: 4036527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4036651:1
position: 4036651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4082872-4083070:1:exon

position:4082872:1
position: 4082872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4083070:1
position: 4083070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4118342-4118533:1:exon

position:4118342:1
position: 4118342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4118533:1
position: 4118533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4124272-4126006:1:exon

position:4124272:1
position: 4124272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYNPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SYNPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptoporin isoform X1
translation: MDPVSQLASAGAFRALKEPLAFLRALELLFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPTCEGKERQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIVTVVFSFLWLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAVHSPVMSSLNTSVVFGFLNFILWAGNIWFVFKETGWHSSGQRYLSDPMEKHSSSYTQGGYNQDSYGSSSGYGQQVSLGPSSDEFGQQPSGPTSFTNQI
SIO_010081: SYNPR
subclass of: SO_0000673
so part of: SYNPR
location: join(3876845..3876862,3876994..3877059,4036527..4036651,4082872..4083070,4118342..4118533,4124272..4124529)
location: region:3876845-4124529:1
so has part: feature:3876845-3876862:1:exon
so has part: feature:3876994-3877059:1:exon
so has part: feature:4036527-4036651:1:exon
so has part: feature:4082872-4083070:1:exon
so has part: feature:4118342-4118533:1:exon
so has part: feature:4124272-4124529:1:exon

XP_012625378.1
type: Protein
SIO_000068: ncbiprotein

position:3876845:1
position: 3876845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4124529:1
position: 4124529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3876845-3876862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3876994-3877059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4036527-4036651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4082872-4083070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4118342-4118533:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4124272-4124529:1:exon

SYNPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SYNPR
product: synaptoporin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 241 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012769925.2
SIO_010081: SYNPR
subclass of: SO_0000673
so part of: SYNPR
location: join(4004188..4004588,4036527..4036651,4082872..4083070,4118342..4118533,4124272..4126006)
location: region:4004188-4126006:1
so has part: feature:4004188-4004588:1:exon
so has part: feature:4036527-4036651:1:exon
so has part: feature:4082872-4083070:1:exon
so has part: feature:4118342-4118533:1:exon
so has part: feature:4124272-4126006:1:exon

position:4004188:1
position: 4004188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4004188-4004588:1:exon

position:4004588:1
position: 4004588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4036527-4036651:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4082872-4083070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4118342-4118533:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4124272-4126006:1:exon

SYNPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SYNPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptoporin isoform X2
translation: MCMVIFAPLFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPTCEGKERQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIVTVVFSFLWLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAVHSPVMSSLNTSVVFGFLNFILWAGNIWFVFKETGWHSSGQRYLSDPMEKHSSSYTQGGYNQDSYGSSSGYGQQVSLGPSSDEFGQQPSGPTSFTNQI
SIO_010081: SYNPR
subclass of: SO_0000673
so part of: SYNPR
location: join(4004565..4004588,4036527..4036651,4082872..4083070,4118342..4118533,4124272..4124529)
location: region:4004565-4124529:1
so has part: feature:4004565-4004588:1:exon
so has part: feature:4036527-4036651:1:exon
so has part: feature:4082872-4083070:1:exon
so has part: feature:4118342-4118533:1:exon
so has part: feature:4124272-4124529:1:exon

XP_012625379.1
type: Protein
SIO_000068: ncbiprotein

position:4004565:1
position: 4004565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4004565-4004588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4036527-4036651:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4082872-4083070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4118342-4118533:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4124272-4124529:1:exon

LOC105874263
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105874263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4156033..4231601)
location: region:4156033-4231601:-1
so has part: feature:4156033-4231601:-1:exon
subclass of: SO_0000010

105874263
type: Gene
SIO_000068: ncbigene

position:4156033:-1
position: 4156033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4231601:-1
position: 4231601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4156033-4231601:-1:exon

LOC105874263
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: LOC105874263
product: cadherin-related family member 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001155430.2
SIO_010081: LOC105874263
so part of: LOC105874263
location: complement(join(4156033..4156161,4162573..4162765,4169424..4169488,4169592..4169611,4170365..4170564,4171613..4171857,4173043..4173214,4176441..4176673,4183422..4183520,4187389..4187491,4189627..4189789,4192206..4192383,4194661..4194848,4195653..4195760,4198449..4198543,4217584..4217672,4221955..4222126,4227655..4227851,4230770..4231601))
location: region:4156033-4231601:-1
so has part: feature:4230770-4231601:-1:exon
so has part: feature:4227655-4227851:-1:exon
so has part: feature:4221955-4222126:-1:exon
so has part: feature:4217584-4217672:-1:exon
so has part: feature:4198449-4198543:-1:exon
so has part: feature:4195653-4195760:-1:exon
so has part: feature:4194661-4194848:-1:exon
so has part: feature:4192206-4192383:-1:exon
so has part: feature:4189627-4189789:-1:exon
so has part: feature:4187389-4187491:-1:exon
so has part: feature:4183422-4183520:-1:exon
so has part: feature:4176441-4176673:-1:exon
so has part: feature:4173043-4173214:-1:exon
so has part: feature:4171613-4171857:-1:exon
so has part: feature:4170365-4170564:-1:exon
so has part: feature:4169592-4169611:-1:exon
so has part: feature:4169424-4169488:-1:exon
so has part: feature:4162573-4162765:-1:exon
so has part: feature:4156033-4156161:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4230770-4231601:-1:exon

position:4230770:-1
position: 4230770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4227655-4227851:-1:exon

position:4227655:-1
position: 4227655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4227851:-1
position: 4227851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4221955-4222126:-1:exon

position:4221955:-1
position: 4221955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4222126:-1
position: 4222126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4217584-4217672:-1:exon

position:4217584:-1
position: 4217584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4217672:-1
position: 4217672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4198449-4198543:-1:exon

position:4198449:-1
position: 4198449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4198543:-1
position: 4198543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4195653-4195760:-1:exon

position:4195653:-1
position: 4195653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4195760:-1
position: 4195760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4194661-4194848:-1:exon

position:4194661:-1
position: 4194661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4194848:-1
position: 4194848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4192206-4192383:-1:exon

position:4192206:-1
position: 4192206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4192383:-1
position: 4192383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4189627-4189789:-1:exon

position:4189627:-1
position: 4189627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4189789:-1
position: 4189789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4187389-4187491:-1:exon

position:4187389:-1
position: 4187389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4187491:-1
position: 4187491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4183422-4183520:-1:exon

position:4183422:-1
position: 4183422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4183520:-1
position: 4183520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4176441-4176673:-1:exon

position:4176441:-1
position: 4176441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4176673:-1
position: 4176673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4173043-4173214:-1:exon

position:4173043:-1
position: 4173043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4173214:-1
position: 4173214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4171613-4171857:-1:exon

position:4171613:-1
position: 4171613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4171857:-1
position: 4171857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4170365-4170564:-1:exon

position:4170365:-1
position: 4170365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4170564:-1
position: 4170564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4169592-4169611:-1:exon

position:4169592:-1
position: 4169592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4169611:-1
position: 4169611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4169424-4169488:-1:exon

position:4169424:-1
position: 4169424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4169488:-1
position: 4169488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4162573-4162765:-1:exon

position:4162573:-1
position: 4162573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4162765:-1
position: 4162765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4156033-4156161:-1:exon

position:4156161:-1
position: 4156161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105874263
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874263
product: cadherin-related family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012769909.2
SIO_010081: LOC105874263
subclass of: SO_0000673
so part of: LOC105874263
location: complement(join(4156033..4156161,4162573..4162765,4168058..4168106,4169424..4169488,4169592..4169611,4170365..4170564,4171613..4171857,4173043..4173214,4176441..4176673,4183422..4183520,4187389..4187491,4189627..4189789,4192206..4192383,4194661..4194848,4195653..4195760,4198449..4198543,4217584..4217672,4221955..4222126,4227655..4227851,4230770..4231601))
location: region:4156033-4231601:-1
so has part: feature:4230770-4231601:-1:exon
so has part: feature:4227655-4227851:-1:exon
so has part: feature:4221955-4222126:-1:exon
so has part: feature:4217584-4217672:-1:exon
so has part: feature:4198449-4198543:-1:exon
so has part: feature:4195653-4195760:-1:exon
so has part: feature:4194661-4194848:-1:exon
so has part: feature:4192206-4192383:-1:exon
so has part: feature:4189627-4189789:-1:exon
so has part: feature:4187389-4187491:-1:exon
so has part: feature:4183422-4183520:-1:exon
so has part: feature:4176441-4176673:-1:exon
so has part: feature:4173043-4173214:-1:exon
so has part: feature:4171613-4171857:-1:exon
so has part: feature:4170365-4170564:-1:exon
so has part: feature:4169592-4169611:-1:exon
so has part: feature:4169424-4169488:-1:exon
so has part: feature:4168058-4168106:-1:exon
so has part: feature:4162573-4162765:-1:exon
so has part: feature:4156033-4156161:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4230770-4231601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4227655-4227851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4221955-4222126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4217584-4217672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4198449-4198543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4195653-4195760:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4194661-4194848:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4192206-4192383:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4189627-4189789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4187389-4187491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4183422-4183520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4176441-4176673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4173043-4173214:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4171613-4171857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4170365-4170564:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4169592-4169611:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4169424-4169488:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4168058-4168106:-1:exon

position:4168058:-1
position: 4168058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4168106:-1
position: 4168106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4162573-4162765:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4156033-4156161:-1:exon

LOC105874263
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874263
product: cadherin-related family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012769910.2
SIO_010081: LOC105874263
subclass of: SO_0000673
so part of: LOC105874263
location: complement(join(4162273..4162765,4169424..4169488,4169592..4169611,4170365..4170564,4171613..4171857,4173043..4173214,4176441..4176673,4183422..4183520,4187389..4187491,4189627..4189789,4192206..4192383,4194661..4194848,4195653..4195760,4198449..4198543,4217584..4217672,4221955..4222126,4227655..4227851,4230770..4231601))
location: region:4162273-4231601:-1
so has part: feature:4230770-4231601:-1:exon
so has part: feature:4227655-4227851:-1:exon
so has part: feature:4221955-4222126:-1:exon
so has part: feature:4217584-4217672:-1:exon
so has part: feature:4198449-4198543:-1:exon
so has part: feature:4195653-4195760:-1:exon
so has part: feature:4194661-4194848:-1:exon
so has part: feature:4192206-4192383:-1:exon
so has part: feature:4189627-4189789:-1:exon
so has part: feature:4187389-4187491:-1:exon
so has part: feature:4183422-4183520:-1:exon
so has part: feature:4176441-4176673:-1:exon
so has part: feature:4173043-4173214:-1:exon
so has part: feature:4171613-4171857:-1:exon
so has part: feature:4170365-4170564:-1:exon
so has part: feature:4169592-4169611:-1:exon
so has part: feature:4169424-4169488:-1:exon
so has part: feature:4162273-4162765:-1:exon

position:4162273:-1
position: 4162273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4230770-4231601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4227655-4227851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4221955-4222126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4217584-4217672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4198449-4198543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4195653-4195760:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4194661-4194848:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4192206-4192383:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4189627-4189789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4187389-4187491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4183422-4183520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4176441-4176673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4173043-4173214:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4171613-4171857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4170365-4170564:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4169592-4169611:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4169424-4169488:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4162273-4162765:-1:exon

LOC105874263
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874263
product: cadherin-related family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012769908.2
SIO_010081: LOC105874263
subclass of: SO_0000673
so part of: LOC105874263
location: complement(join(4162273..4162765,4168058..4168106,4169424..4169488,4169592..4169611,4170365..4170564,4171613..4171857,4173043..4173214,4176441..4176673,4183422..4183520,4187389..4187491,4189627..4189789,4192206..4192383,4194661..4194848,4195653..4195760,4198449..4198543,4217584..4217672,4221955..4222126,4227655..4227851,4230770..4231601))
location: region:4162273-4231601:-1
so has part: feature:4230770-4231601:-1:exon
so has part: feature:4227655-4227851:-1:exon
so has part: feature:4221955-4222126:-1:exon
so has part: feature:4217584-4217672:-1:exon
so has part: feature:4198449-4198543:-1:exon
so has part: feature:4195653-4195760:-1:exon
so has part: feature:4194661-4194848:-1:exon
so has part: feature:4192206-4192383:-1:exon
so has part: feature:4189627-4189789:-1:exon
so has part: feature:4187389-4187491:-1:exon
so has part: feature:4183422-4183520:-1:exon
so has part: feature:4176441-4176673:-1:exon
so has part: feature:4173043-4173214:-1:exon
so has part: feature:4171613-4171857:-1:exon
so has part: feature:4170365-4170564:-1:exon
so has part: feature:4169592-4169611:-1:exon
so has part: feature:4169424-4169488:-1:exon
so has part: feature:4168058-4168106:-1:exon
so has part: feature:4162273-4162765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4230770-4231601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4227655-4227851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4221955-4222126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4217584-4217672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4198449-4198543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4195653-4195760:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4194661-4194848:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4192206-4192383:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4189627-4189789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4187389-4187491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4183422-4183520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4176441-4176673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4173043-4173214:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4171613-4171857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4170365-4170564:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4169592-4169611:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4169424-4169488:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4168058-4168106:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4162273-4162765:-1:exon

LOC105874263
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-related family member 3 isoform X1
translation: MFLLKGLLPQGGNSLEVSEGTSWSKVTLKTQEAFKQIMSFFHLLFVLAAAPGLLAFPNFVIENVSPLLENASEHTRVARITVSVSPGASLVGDPVIINANPAVHPFVLSRRSTRLWELSTTGVPKLDFETVKIYSLVIYAKDNQGTTASQAILIQIADVNEPPTFSGSLAQRDQVTEIYIREDTAPGTVIYRATAKDPEDAVLEYFISPEGSGFTVDSVGTISTAVAFDFESKATSFSLVIKVVDPQGLFTDGNLKIFLINVNNKDPILTCSLEGAVSSVTSINSSLHNKVNITLDEEIPIGKRIGVCQATDEDNLGDLTFELDPWNVDFIVDKERGTVVTATRLDVERAGFAGVQPFSIKACDGDRRCAAIPVTAHIHGINDNSPFCDRYLIRYTGKEVITKGTVVARLSCHDLDEPPDTIHYAPSSGPVGSGQLFEQVPNADNCIQVARELDYEDPELVTAGHIYEMMISVFDDLRPSHTVTVTVIVEIAPANDFSPEFKAAHYSFSIPETSGAFYKVGRVTAIDEDHPPNCVTYKITNGDIEVVQRFWIHPLSGMIELTTQPDYESVKQYNLTVEAVDCDRFRPRTAMATVTVDIEDENDEAPVCTPSLYKAVIFDNAVAGTNVNGFKLNCHDRDSQDFEMRFEMVSGNENHHFGFDPTRGSNTPKLIVKNPFNFESRAELQRQYHLVVHVIDDNLKYGRSTKPRTGTAIIDIYVTRANMPPPPTTSSEQRKGLTVVYTAINTFKSSDWYIPFIFTLMAVFFVGFVSWVCFLLWKYGNIMGCCQKMAKEVSKPIPKGMKYITGDRNPKGKTVIGNRNKNLELLTETIVCETVFDGEAIDPVSGNVYEYNSRTGARKWKKSPRHQEESLANIYSLPEPVSSEESTSLNIPLQG
SIO_010081: LOC105874263
subclass of: SO_0000673
so part of: LOC105874263
location: complement(join(4162608..4162765,4168058..4168106,4169424..4169488,4169592..4169611,4170365..4170564,4171613..4171857,4173043..4173214,4176441..4176673,4183422..4183520,4187389..4187491,4189627..4189789,4192206..4192383,4194661..4194848,4195653..4195760,4198449..4198543,4217584..4217672,4221955..4222126,4227655..4227851,4230770..4230923))
location: region:4162608-4230923:-1
so has part: feature:4230770-4230923:-1:exon
so has part: feature:4227655-4227851:-1:exon
so has part: feature:4221955-4222126:-1:exon
so has part: feature:4217584-4217672:-1:exon
so has part: feature:4198449-4198543:-1:exon
so has part: feature:4195653-4195760:-1:exon
so has part: feature:4194661-4194848:-1:exon
so has part: feature:4192206-4192383:-1:exon
so has part: feature:4189627-4189789:-1:exon
so has part: feature:4187389-4187491:-1:exon
so has part: feature:4183422-4183520:-1:exon
so has part: feature:4176441-4176673:-1:exon
so has part: feature:4173043-4173214:-1:exon
so has part: feature:4171613-4171857:-1:exon
so has part: feature:4170365-4170564:-1:exon
so has part: feature:4169592-4169611:-1:exon
so has part: feature:4169424-4169488:-1:exon
so has part: feature:4168058-4168106:-1:exon
so has part: feature:4162608-4162765:-1:exon

XP_012625362.2
type: Protein
SIO_000068: ncbiprotein

position:4162608:-1
position: 4162608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4230923:-1
position: 4230923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4230770-4230923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4227655-4227851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4221955-4222126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4217584-4217672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4198449-4198543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4195653-4195760:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4194661-4194848:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4192206-4192383:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4189627-4189789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4187389-4187491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4183422-4183520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4176441-4176673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4173043-4173214:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4171613-4171857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4170365-4170564:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4169592-4169611:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4169424-4169488:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4168058-4168106:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4162608-4162765:-1:exon

LOC105874263
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-related family member 3 isoform X1
translation: MFLLKGLLPQGGNSLEVSEGTSWSKVTLKTQEAFKQIMSFFHLLFVLAAAPGLLAFPNFVIENVSPLLENASEHTRVARITVSVSPGASLVGDPVIINANPAVHPFVLSRRSTRLWELSTTGVPKLDFETVKIYSLVIYAKDNQGTTASQAILIQIADVNEPPTFSGSLAQRDQVTEIYIREDTAPGTVIYRATAKDPEDAVLEYFISPEGSGFTVDSVGTISTAVAFDFESKATSFSLVIKVVDPQGLFTDGNLKIFLINVNNKDPILTCSLEGAVSSVTSINSSLHNKVNITLDEEIPIGKRIGVCQATDEDNLGDLTFELDPWNVDFIVDKERGTVVTATRLDVERAGFAGVQPFSIKACDGDRRCAAIPVTAHIHGINDNSPFCDRYLIRYTGKEVITKGTVVARLSCHDLDEPPDTIHYAPSSGPVGSGQLFEQVPNADNCIQVARELDYEDPELVTAGHIYEMMISVFDDLRPSHTVTVTVIVEIAPANDFSPEFKAAHYSFSIPETSGAFYKVGRVTAIDEDHPPNCVTYKITNGDIEVVQRFWIHPLSGMIELTTQPDYESVKQYNLTVEAVDCDRFRPRTAMATVTVDIEDENDEAPVCTPSLYKAVIFDNAVAGTNVNGFKLNCHDRDSQDFEMRFEMVSGNENHHFGFDPTRGSNTPKLIVKNPFNFESRAELQRQYHLVVHVIDDNLKYGRSTKPRTGTAIIDIYVTRANMPPPPTTSSEQRKGLTVVYTAINTFKSSDWYIPFIFTLMAVFFVGFVSWVCFLLWKYGNIMGCCQKMAKEVSKPIPKGMKYITGDRNPKGKTVIGNRNKNLELLTETIVCETVFDGEAIDPVSGNVYEYNSRTGARKWKKSPRHQEESLANIYSLPEPVSSEESTSLNIPLQG
SIO_010081: LOC105874263
subclass of: SO_0000673
so part of: LOC105874263
location: complement(join(4162608..4162765,4168058..4168106,4169424..4169488,4169592..4169611,4170365..4170564,4171613..4171857,4173043..4173214,4176441..4176673,4183422..4183520,4187389..4187491,4189627..4189789,4192206..4192383,4194661..4194848,4195653..4195760,4198449..4198543,4217584..4217672,4221955..4222126,4227655..4227851,4230770..4230923))
location: region:4162608-4230923:-1
so has part: feature:4230770-4230923:-1:exon
so has part: feature:4227655-4227851:-1:exon
so has part: feature:4221955-4222126:-1:exon
so has part: feature:4217584-4217672:-1:exon
so has part: feature:4198449-4198543:-1:exon
so has part: feature:4195653-4195760:-1:exon
so has part: feature:4194661-4194848:-1:exon
so has part: feature:4192206-4192383:-1:exon
so has part: feature:4189627-4189789:-1:exon
so has part: feature:4187389-4187491:-1:exon
so has part: feature:4183422-4183520:-1:exon
so has part: feature:4176441-4176673:-1:exon
so has part: feature:4173043-4173214:-1:exon
so has part: feature:4171613-4171857:-1:exon
so has part: feature:4170365-4170564:-1:exon
so has part: feature:4169592-4169611:-1:exon
so has part: feature:4169424-4169488:-1:exon
so has part: feature:4168058-4168106:-1:exon
so has part: feature:4162608-4162765:-1:exon

XP_012625363.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4230770-4230923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4227655-4227851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4221955-4222126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4217584-4217672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4198449-4198543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4195653-4195760:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4194661-4194848:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4192206-4192383:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4189627-4189789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4187389-4187491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4183422-4183520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4176441-4176673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4173043-4173214:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4171613-4171857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4170365-4170564:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4169592-4169611:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4169424-4169488:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4168058-4168106:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4162608-4162765:-1:exon

LOC105874263
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-related family member 3 isoform X2
translation: MFLLKGLLPQGGNSLEVSEGTSWSKVTLKTQEAFKQIMSFFHLLFVLAAAPGLLAFPNFVIENVSPLLENASEHTRVARITVSVSPGASLVGDPVIINANPAVHPFVLSRRSTRLWELSTTGVPKLDFETVKIYSLVIYAKDNQGTTASQAILIQIADVNEPPTFSGSLAQRDQVTEIYIREDTAPGTVIYRATAKDPEDAVLEYFISPEGSGFTVDSVGTISTAVAFDFESKATSFSLVIKVVDPQGLFTDGNLKIFLINVNNKDPILTCSLEGAVSSVTSINSSLHNKVNITLDEEIPIGKRIGVCQATDEDNLGDLTFELDPWNVDFIVDKERGTVVTATRLDVERAGFAGVQPFSIKACDGDRRCAAIPVTAHIHGINDNSPFCDRYLIRYTGKEVITKGTVVARLSCHDLDEPPDTIHYAPSSGPVGSGQLFEQVPNADNCIQVARELDYEDPELVTAGHIYEMMISVFDDLRPSHTVTVTVIVEIAPANDFSPEFKAAHYSFSIPETSGAFYKVGRVTAIDEDHPPNCVTYKITNGDIEVVQRFWIHPLSGMIELTTQPDYESVKQYNLTVEAVDCDRFRPRTAMATVTVDIEDENDEAPVCTPSLYKAVIFDNAVAGTNVNGFKLNCHDRDSQDFEMRFEMVSGNENHHFGFDPTRGSNTPKLIVKNPFNFESRAELQRQYHLVVHVIDDNLKYGRSTKPRTGTAIIDIYVTRANMPPPPTTSSEQRKGLTVVYTAINTFKSSDWYIPFIFTLMAVFFVGFVSWVCFLLWKYGNIMGCCQKMAKEVSKPIPKGMKYITGDRNPKGKTVIGNRNKNLELLTSPGTFMNITAEQVQESGKSPPGTRRSPWQTYTPSQNQSLLRNLHP
SIO_010081: LOC105874263
subclass of: SO_0000673
so part of: LOC105874263
location: complement(join(4162628..4162765,4169424..4169488,4169592..4169611,4170365..4170564,4171613..4171857,4173043..4173214,4176441..4176673,4183422..4183520,4187389..4187491,4189627..4189789,4192206..4192383,4194661..4194848,4195653..4195760,4198449..4198543,4217584..4217672,4221955..4222126,4227655..4227851,4230770..4230923))
location: region:4162628-4230923:-1
so has part: feature:4230770-4230923:-1:exon
so has part: feature:4227655-4227851:-1:exon
so has part: feature:4221955-4222126:-1:exon
so has part: feature:4217584-4217672:-1:exon
so has part: feature:4198449-4198543:-1:exon
so has part: feature:4195653-4195760:-1:exon
so has part: feature:4194661-4194848:-1:exon
so has part: feature:4192206-4192383:-1:exon
so has part: feature:4189627-4189789:-1:exon
so has part: feature:4187389-4187491:-1:exon
so has part: feature:4183422-4183520:-1:exon
so has part: feature:4176441-4176673:-1:exon
so has part: feature:4173043-4173214:-1:exon
so has part: feature:4171613-4171857:-1:exon
so has part: feature:4170365-4170564:-1:exon
so has part: feature:4169592-4169611:-1:exon
so has part: feature:4169424-4169488:-1:exon
so has part: feature:4162628-4162765:-1:exon

XP_012625364.2
type: Protein
SIO_000068: ncbiprotein

position:4162628:-1
position: 4162628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4230770-4230923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4227655-4227851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4221955-4222126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4217584-4217672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4198449-4198543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4195653-4195760:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4194661-4194848:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4192206-4192383:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4189627-4189789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4187389-4187491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4183422-4183520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4176441-4176673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4173043-4173214:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4171613-4171857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4170365-4170564:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4169592-4169611:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4169424-4169488:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4162628-4162765:-1:exon

LOC105874263
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: LOC105874263
product: cadherin-related family member 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001155432.2
SIO_010081: LOC105874263
so part of: LOC105874263
location: complement(join(4162746..4162765,4169424..4169488,4169592..4169611,4171613..4171857,4173043..4173214,4176441..4176673,4183422..4183520,4187389..4187491,4189627..4189789,4192206..4192383,4194661..4194848,4195653..4195760,4198449..4198543,4217584..4217672,4221955..4222126,4227655..4227851,4230770..4231601))
location: region:4162746-4231601:-1
so has part: feature:4230770-4231601:-1:exon
so has part: feature:4227655-4227851:-1:exon
so has part: feature:4221955-4222126:-1:exon
so has part: feature:4217584-4217672:-1:exon
so has part: feature:4198449-4198543:-1:exon
so has part: feature:4195653-4195760:-1:exon
so has part: feature:4194661-4194848:-1:exon
so has part: feature:4192206-4192383:-1:exon
so has part: feature:4189627-4189789:-1:exon
so has part: feature:4187389-4187491:-1:exon
so has part: feature:4183422-4183520:-1:exon
so has part: feature:4176441-4176673:-1:exon
so has part: feature:4173043-4173214:-1:exon
so has part: feature:4171613-4171857:-1:exon
so has part: feature:4169592-4169611:-1:exon
so has part: feature:4169424-4169488:-1:exon
so has part: feature:4162746-4162765:-1:exon

position:4162746:-1
position: 4162746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4230770-4231601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4227655-4227851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4221955-4222126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4217584-4217672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4198449-4198543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4195653-4195760:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4194661-4194848:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4192206-4192383:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4189627-4189789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4187389-4187491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4183422-4183520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4176441-4176673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4173043-4173214:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4171613-4171857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4169592-4169611:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4169424-4169488:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4162746-4162765:-1:exon

LOC105874263
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: LOC105874263
product: cadherin-related family member 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001155431.2
SIO_010081: LOC105874263
so part of: LOC105874263
location: complement(join(4168089..4168106,4169424..4169488,4169592..4169611,4171613..4171857,4173043..4173214,4176441..4176673,4183422..4183520,4187389..4187491,4189627..4189789,4192206..4192383,4194661..4194848,4195653..4195760,4198449..4198543,4217584..4217672,4221955..4222126,4227655..4227851,4230770..4231601))
location: region:4168089-4231601:-1
so has part: feature:4230770-4231601:-1:exon
so has part: feature:4227655-4227851:-1:exon
so has part: feature:4221955-4222126:-1:exon
so has part: feature:4217584-4217672:-1:exon
so has part: feature:4198449-4198543:-1:exon
so has part: feature:4195653-4195760:-1:exon
so has part: feature:4194661-4194848:-1:exon
so has part: feature:4192206-4192383:-1:exon
so has part: feature:4189627-4189789:-1:exon
so has part: feature:4187389-4187491:-1:exon
so has part: feature:4183422-4183520:-1:exon
so has part: feature:4176441-4176673:-1:exon
so has part: feature:4173043-4173214:-1:exon
so has part: feature:4171613-4171857:-1:exon
so has part: feature:4169592-4169611:-1:exon
so has part: feature:4169424-4169488:-1:exon
so has part: feature:4168089-4168106:-1:exon

position:4168089:-1
position: 4168089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4230770-4231601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4227655-4227851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4221955-4222126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4217584-4217672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4198449-4198543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4195653-4195760:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4194661-4194848:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4192206-4192383:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4189627-4189789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4187389-4187491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4183422-4183520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4176441-4176673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4173043-4173214:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4171613-4171857:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4169592-4169611:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4169424-4169488:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4168089-4168106:-1:exon

LOC105874267
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105874267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4173127..4183408
location: region:4173127-4183408:1
so has part: feature:4173127-4183408:1:exon
subclass of: SO_0000011

105874267
type: Gene
SIO_000068: ncbigene

position:4173127:1
position: 4173127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4183408:1
position: 4183408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4173127-4183408:1:exon

LOC105874267
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105874267
product: uncharacterized LOC105874267, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001155436.2
SIO_010081: LOC105874267
subclass of: SO_0000673
so part of: LOC105874267
location: join(4173127..4173285,4182478..4182662,4182831..4183408)
location: region:4173127-4183408:1
so has part: feature:4173127-4173285:1:exon
so has part: feature:4182478-4182662:1:exon
so has part: feature:4182831-4183408:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4173127-4173285:1:exon

position:4173285:1
position: 4173285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4182478-4182662:1:exon

position:4182478:1
position: 4182478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4182662:1
position: 4182662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4182831-4183408:1:exon

position:4182831:1
position: 4182831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105874267
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105874267
product: uncharacterized LOC105874267, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001155437.2
SIO_010081: LOC105874267
subclass of: SO_0000673
so part of: LOC105874267
location: join(4173127..4173285,4182478..4182662,4182831..4182946,4183218..4183408)
location: region:4173127-4183408:1
so has part: feature:4173127-4173285:1:exon
so has part: feature:4182478-4182662:1:exon
so has part: feature:4182831-4182946:1:exon
so has part: feature:4183218-4183408:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4173127-4173285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4182478-4182662:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4182831-4182946:1:exon

position:4182946:1
position: 4182946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4183218-4183408:1:exon

position:4183218:1
position: 4183218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105874264
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4204405..4254982
location: region:4204405-4254982:1
so has part: feature:4204405-4254982:1:exon
subclass of: SO_0000010

105874264
type: Gene
SIO_000068: ncbigene

position:4204405:1
position: 4204405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4254982:1
position: 4254982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4204405-4254982:1:exon

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284640.1
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4204405..4204500,4215447..4215531,4227664..4227946,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254365)
location: region:4204405-4254365:1
so has part: feature:4204405-4204500:1:exon
so has part: feature:4215447-4215531:1:exon
so has part: feature:4227664-4227946:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254365:1:exon

position:4254365:1
position: 4254365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4204405-4204500:1:exon

position:4204500:1
position: 4204500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4215447-4215531:1:exon

position:4215447:1
position: 4215447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4215531:1
position: 4215531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4227664-4227946:1:exon

position:4227664:1
position: 4227664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4227946:1
position: 4227946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4240707-4241029:1:exon

position:4240707:1
position: 4240707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4241029:1
position: 4241029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4242204-4242331:1:exon

position:4242204:1
position: 4242204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4242331:1
position: 4242331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4245815-4245928:1:exon

position:4245815:1
position: 4245815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4245928:1
position: 4245928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4246381-4246545:1:exon

position:4246381:1
position: 4246381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4246545:1
position: 4246545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4254192-4254365:1:exon

position:4254192:1
position: 4254192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284641.1
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4204405..4204500,4215447..4215531,4227664..4227749,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254365)
location: region:4204405-4254365:1
so has part: feature:4204405-4204500:1:exon
so has part: feature:4215447-4215531:1:exon
so has part: feature:4227664-4227749:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204405-4204500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4215447-4215531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4227664-4227749:1:exon

position:4227749:1
position: 4227749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4254192-4254365:1:exon

LOC105874264
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001155433.2
SIO_010081: LOC105874264
so part of: LOC105874264
location: join(4204405..4204500,4215447..4215531,4227664..4227749,4235240..4236406,4240707..4241029,4242180..4242331,4245815..4245928,4246381..4246773)
location: region:4204405-4246773:1
so has part: feature:4204405-4204500:1:exon
so has part: feature:4215447-4215531:1:exon
so has part: feature:4227664-4227749:1:exon
so has part: feature:4235240-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242180-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246773:1:exon

position:4246773:1
position: 4246773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4204405-4204500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4215447-4215531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4227664-4227749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4235240-4236406:1:exon

position:4235240:1
position: 4235240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4236406:1
position: 4236406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4242180-4242331:1:exon

position:4242180:1
position: 4242180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4246381-4246773:1:exon

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012769913.2
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4204406..4204500,4215447..4215531,4227664..4227946,4235240..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254260,4254825..4254982)
location: region:4204406-4254982:1
so has part: feature:4204406-4204500:1:exon
so has part: feature:4215447-4215531:1:exon
so has part: feature:4227664-4227946:1:exon
so has part: feature:4235240-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254260:1:exon
so has part: feature:4254825-4254982:1:exon

position:4204406:1
position: 4204406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4204406-4204500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4215447-4215531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4227664-4227946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4235240-4236406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4254192-4254260:1:exon

position:4254260:1
position: 4254260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4254825-4254982:1:exon

position:4254825:1
position: 4254825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284639.1
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4204406..4204500,4215447..4215531,4227664..4227946,4235240..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246456,4254825..4254981)
location: region:4204406-4254981:1
so has part: feature:4204406-4204500:1:exon
so has part: feature:4215447-4215531:1:exon
so has part: feature:4227664-4227946:1:exon
so has part: feature:4235240-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246456:1:exon
so has part: feature:4254825-4254981:1:exon

position:4254981:1
position: 4254981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4204406-4204500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4215447-4215531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4227664-4227946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4235240-4236406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4246381-4246456:1:exon

position:4246456:1
position: 4246456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4254825-4254981:1:exon

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012769919.2
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4204406..4204500,4215447..4215531,4227664..4227946,4235240..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246456,4254829..4254981)
location: region:4204406-4254981:1
so has part: feature:4204406-4204500:1:exon
so has part: feature:4215447-4215531:1:exon
so has part: feature:4227664-4227946:1:exon
so has part: feature:4235240-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246456:1:exon
so has part: feature:4254829-4254981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204406-4204500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4215447-4215531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4227664-4227946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4235240-4236406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4246381-4246456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4254829-4254981:1:exon

position:4254829:1
position: 4254829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284632.1
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4204406..4204500,4215447..4215602,4227664..4227946,4235240..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254365)
location: region:4204406-4254365:1
so has part: feature:4204406-4204500:1:exon
so has part: feature:4215447-4215602:1:exon
so has part: feature:4227664-4227946:1:exon
so has part: feature:4235240-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204406-4204500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4215447-4215602:1:exon

position:4215602:1
position: 4215602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4227664-4227946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4235240-4236406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4254192-4254365:1:exon

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012769921.2
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4204406..4204500,4215447..4215531,4227664..4227946,4235240..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246456,4254188..4254365)
location: region:4204406-4254365:1
so has part: feature:4204406-4204500:1:exon
so has part: feature:4215447-4215531:1:exon
so has part: feature:4227664-4227946:1:exon
so has part: feature:4235240-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246456:1:exon
so has part: feature:4254188-4254365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204406-4204500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4215447-4215531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4227664-4227946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4235240-4236406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4246381-4246456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4254188-4254365:1:exon

position:4254188:1
position: 4254188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012769918.2
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4204406..4204500,4215447..4215531,4227664..4227946,4235240..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246456,4254192..4254365)
location: region:4204406-4254365:1
so has part: feature:4204406-4204500:1:exon
so has part: feature:4215447-4215531:1:exon
so has part: feature:4227664-4227946:1:exon
so has part: feature:4235240-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246456:1:exon
so has part: feature:4254192-4254365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204406-4204500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4215447-4215531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4227664-4227946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4235240-4236406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4246381-4246456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4254192-4254365:1:exon

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284635.1
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4204406..4204500,4215447..4215531,4227664..4227946,4235240..4235377,4235861..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254365)
location: region:4204406-4254365:1
so has part: feature:4204406-4204500:1:exon
so has part: feature:4215447-4215531:1:exon
so has part: feature:4227664-4227946:1:exon
so has part: feature:4235240-4235377:1:exon
so has part: feature:4235861-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204406-4204500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4215447-4215531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4227664-4227946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4235240-4235377:1:exon

position:4235377:1
position: 4235377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4235861-4236406:1:exon

position:4235861:1
position: 4235861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4254192-4254365:1:exon

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284637.1
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4204406..4204500,4215447..4215531,4227664..4227946,4235240..4235377,4235995..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254365)
location: region:4204406-4254365:1
so has part: feature:4204406-4204500:1:exon
so has part: feature:4215447-4215531:1:exon
so has part: feature:4227664-4227946:1:exon
so has part: feature:4235240-4235377:1:exon
so has part: feature:4235995-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204406-4204500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4215447-4215531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4227664-4227946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4235240-4235377:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4235995-4236406:1:exon

position:4235995:1
position: 4235995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4254192-4254365:1:exon

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012769916.2
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4204406..4204500,4215447..4215531,4227664..4227946,4235861..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254365)
location: region:4204406-4254365:1
so has part: feature:4204406-4204500:1:exon
so has part: feature:4215447-4215531:1:exon
so has part: feature:4227664-4227946:1:exon
so has part: feature:4235861-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204406-4204500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4215447-4215531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4227664-4227946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4235861-4236406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4254192-4254365:1:exon

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284634.1
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4204406..4204500,4215447..4215531,4227664..4227749,4235227..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254365)
location: region:4204406-4254365:1
so has part: feature:4204406-4204500:1:exon
so has part: feature:4215447-4215531:1:exon
so has part: feature:4227664-4227749:1:exon
so has part: feature:4235227-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204406-4204500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4215447-4215531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4227664-4227749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4235227-4236406:1:exon

position:4235227:1
position: 4235227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4254192-4254365:1:exon

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284633.1
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4204406..4204500,4215447..4215531,4227664..4227749,4235240..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254365)
location: region:4204406-4254365:1
so has part: feature:4204406-4204500:1:exon
so has part: feature:4215447-4215531:1:exon
so has part: feature:4227664-4227749:1:exon
so has part: feature:4235240-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204406-4204500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4215447-4215531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4227664-4227749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4235240-4236406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4254192-4254365:1:exon

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284636.1
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4204406..4204500,4215447..4215531,4227664..4227749,4235861..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254365)
location: region:4204406-4254365:1
so has part: feature:4204406-4204500:1:exon
so has part: feature:4215447-4215531:1:exon
so has part: feature:4227664-4227749:1:exon
so has part: feature:4235861-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4204406-4204500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4215447-4215531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4227664-4227749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4235861-4236406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4254192-4254365:1:exon

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284638.1
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4215636..4215897,4227664..4227946,4235240..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254365)
location: region:4215636-4254365:1
so has part: feature:4215636-4215897:1:exon
so has part: feature:4227664-4227946:1:exon
so has part: feature:4235240-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254365:1:exon

position:4215636:1
position: 4215636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4215636-4215897:1:exon

position:4215897:1
position: 4215897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4227664-4227946:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4235240-4236406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4254192-4254365:1:exon

LOC105874264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874264
product: putative uncharacterized protein C3orf49, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012769914.2
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4227363..4227403,4227664..4227946,4235240..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254365)
location: region:4227363-4254365:1
so has part: feature:4227363-4227403:1:exon
so has part: feature:4227664-4227946:1:exon
so has part: feature:4235240-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254365:1:exon

position:4227363:1
position: 4227363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4227363-4227403:1:exon

position:4227403:1
position: 4227403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4227664-4227946:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4235240-4236406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4254192-4254365:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X3
translation: MAHPQLSLPEPFKVAYEKVGQSRRLQQLKKKNGSFKRKGIERWHRAVSTNLVKQNVLVPKEESSSDSDIGFHESQQNQKKNLMKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQCL
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4236282..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246456,4254829..4254836)
location: region:4236282-4254836:1
so has part: feature:4236282-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246456:1:exon
so has part: feature:4254829-4254836:1:exon

XP_012625373.1
type: Protein
SIO_000068: ncbiprotein

position:4236282:1
position: 4236282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4254836:1
position: 4254836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4236282-4236406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4246381-4246456:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4254829-4254836:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X5
translation: MAHPQLSLPEPFKVAYEKVGQSRRLQQLKKKNGSFKRKGIERWHRAVSTNLVKQNVLVPKEESSSDSDIGFHESQQNQKKNLMKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQ
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4236282..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246456,4254825..4254826)
location: region:4236282-4254826:1
so has part: feature:4236282-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246456:1:exon
so has part: feature:4254825-4254826:1:exon

XP_020140228.1
type: Protein
SIO_000068: ncbiprotein

position:4254826:1
position: 4254826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4236282-4236406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4246381-4246456:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4254825-4254826:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X1
translation: MAHPQLSLPEPFKVAYEKVGQSRRLQQLKKKNGSFKRKGIERWHRAVSTNLVKQNVLVPKEESSSDSDIGFHESQQNQKKNLMKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQCEFLGDEILQSSKQFQRISKRTMRKYKLKNASEEKARKIYS
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4236282..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254227)
location: region:4236282-4254227:1
so has part: feature:4236282-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254227:1:exon

XP_020140221.1
type: Protein
SIO_000068: ncbiprotein

position:4254227:1
position: 4254227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4236282-4236406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4254192-4254227:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X1
translation: MAHPQLSLPEPFKVAYEKVGQSRRLQQLKKKNGSFKRKGIERWHRAVSTNLVKQNVLVPKEESSSDSDIGFHESQQNQKKNLMKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQCEFLGDEILQSSKQFQRISKRTMRKYKLKNASEEKARKIYS
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4236282..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254227)
location: region:4236282-4254227:1
so has part: feature:4236282-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254227:1:exon

XP_020140222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4236282-4236406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4254192-4254227:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X1
translation: MAHPQLSLPEPFKVAYEKVGQSRRLQQLKKKNGSFKRKGIERWHRAVSTNLVKQNVLVPKEESSSDSDIGFHESQQNQKKNLMKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQCEFLGDEILQSSKQFQRISKRTMRKYKLKNASEEKARKIYS
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4236282..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254227)
location: region:4236282-4254227:1
so has part: feature:4236282-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254227:1:exon

XP_020140223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4236282-4236406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4254192-4254227:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X1
translation: MAHPQLSLPEPFKVAYEKVGQSRRLQQLKKKNGSFKRKGIERWHRAVSTNLVKQNVLVPKEESSSDSDIGFHESQQNQKKNLMKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQCEFLGDEILQSSKQFQRISKRTMRKYKLKNASEEKARKIYS
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4236282..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254227)
location: region:4236282-4254227:1
so has part: feature:4236282-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254227:1:exon

XP_020140224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4236282-4236406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4254192-4254227:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X1
translation: MAHPQLSLPEPFKVAYEKVGQSRRLQQLKKKNGSFKRKGIERWHRAVSTNLVKQNVLVPKEESSSDSDIGFHESQQNQKKNLMKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQCEFLGDEILQSSKQFQRISKRTMRKYKLKNASEEKARKIYS
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4236282..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254227)
location: region:4236282-4254227:1
so has part: feature:4236282-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254227:1:exon

XP_020140225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4236282-4236406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4254192-4254227:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X1
translation: MAHPQLSLPEPFKVAYEKVGQSRRLQQLKKKNGSFKRKGIERWHRAVSTNLVKQNVLVPKEESSSDSDIGFHESQQNQKKNLMKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQCEFLGDEILQSSKQFQRISKRTMRKYKLKNASEEKARKIYS
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4236282..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254227)
location: region:4236282-4254227:1
so has part: feature:4236282-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254227:1:exon

XP_020140226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4236282-4236406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4254192-4254227:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X1
translation: MAHPQLSLPEPFKVAYEKVGQSRRLQQLKKKNGSFKRKGIERWHRAVSTNLVKQNVLVPKEESSSDSDIGFHESQQNQKKNLMKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQCEFLGDEILQSSKQFQRISKRTMRKYKLKNASEEKARKIYS
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4236282..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254227)
location: region:4236282-4254227:1
so has part: feature:4236282-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254227:1:exon

XP_020140227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4236282-4236406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4254192-4254227:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X1
translation: MAHPQLSLPEPFKVAYEKVGQSRRLQQLKKKNGSFKRKGIERWHRAVSTNLVKQNVLVPKEESSSDSDIGFHESQQNQKKNLMKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQCEFLGDEILQSSKQFQRISKRTMRKYKLKNASEEKARKIYS
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4236282..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254227)
location: region:4236282-4254227:1
so has part: feature:4236282-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254227:1:exon

XP_012625367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4236282-4236406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4254192-4254227:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X1
translation: MAHPQLSLPEPFKVAYEKVGQSRRLQQLKKKNGSFKRKGIERWHRAVSTNLVKQNVLVPKEESSSDSDIGFHESQQNQKKNLMKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQCEFLGDEILQSSKQFQRISKRTMRKYKLKNASEEKARKIYS
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4236282..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254227)
location: region:4236282-4254227:1
so has part: feature:4236282-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254227:1:exon

XP_012625368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4236282-4236406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4254192-4254227:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X1
translation: MAHPQLSLPEPFKVAYEKVGQSRRLQQLKKKNGSFKRKGIERWHRAVSTNLVKQNVLVPKEESSSDSDIGFHESQQNQKKNLMKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQCEFLGDEILQSSKQFQRISKRTMRKYKLKNASEEKARKIYS
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4236282..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254227)
location: region:4236282-4254227:1
so has part: feature:4236282-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254227:1:exon

XP_012625370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4236282-4236406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4254192-4254227:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X2
translation: MAHPQLSLPEPFKVAYEKVGQSRRLQQLKKKNGSFKRKGIERWHRAVSTNLVKQNVLVPKEESSSDSDIGFHESQQNQKKNLMKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQCL
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4236282..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246456,4254192..4254199)
location: region:4236282-4254199:1
so has part: feature:4236282-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246456:1:exon
so has part: feature:4254192-4254199:1:exon

XP_012625372.1
type: Protein
SIO_000068: ncbiprotein

position:4254199:1
position: 4254199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4236282-4236406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4246381-4246456:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4254192-4254199:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X4
translation: MAHPQLSLPEPFKVAYEKVGQSRRLQQLKKKNGSFKRKGIERWHRAVSTNLVKQNVLVPKEESSSDSDIGFHESQQNQKKNLMKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQ
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4236282..4236406,4240707..4241029,4242204..4242331,4245815..4245928,4246381..4246456,4254188..4254189)
location: region:4236282-4254189:1
so has part: feature:4236282-4236406:1:exon
so has part: feature:4240707-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246456:1:exon
so has part: feature:4254188-4254189:1:exon

XP_012625375.1
type: Protein
SIO_000068: ncbiprotein

position:4254189:1
position: 4254189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4236282-4236406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240707-4241029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4246381-4246456:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4254188-4254189:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X6
translation: MKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQCEFLGDEILQSSKQFQRISKRTMRKYKLKNASEEKARKIYS
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4240828..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254227)
location: region:4240828-4254227:1
so has part: feature:4240828-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254227:1:exon

XP_020140229.1
type: Protein
SIO_000068: ncbiprotein

position:4240828:1
position: 4240828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4240828-4241029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4254192-4254227:1:exon

LOC105874264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein C3orf49 isoform X6
translation: MKKMKTALGRMLSYKHRSKPATTSKGGSTDQKEALLSNMQSLLLRGGRELSSPKLFTKPKMRKLAENEATIQLDVVEAETEEITQGNTLLRARRTTKRLSVTSLPSGLQKVPYSPKKRPHFPALKKKKHGMKNILRKSDLSVGKLQMQVDDLIETVADKSMKLLAQRHAELQQCEFLGDEILQSSKQFQRISKRTMRKYKLKNASEEKARKIYS
SIO_010081: LOC105874264
subclass of: SO_0000673
so part of: LOC105874264
location: join(4240828..4241029,4242204..4242331,4245815..4245928,4246381..4246545,4254192..4254227)
location: region:4240828-4254227:1
so has part: feature:4240828-4241029:1:exon
so has part: feature:4242204-4242331:1:exon
so has part: feature:4245815-4245928:1:exon
so has part: feature:4246381-4246545:1:exon
so has part: feature:4254192-4254227:1:exon

XP_020140230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4240828-4241029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4242204-4242331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4245815-4245928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4246381-4246545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4254192-4254227:1:exon

THOC7
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: THOC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4248219..4255108)
location: region:4248219-4255108:-1
so has part: feature:4248219-4255108:-1:exon
subclass of: SO_0000010

105874265
type: Gene
SIO_000068: ncbigene

position:4248219:-1
position: 4248219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4255108:-1
position: 4255108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4248219-4255108:-1:exon

THOC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: THOC7
product: THO complex 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 183 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012769923.2
SIO_010081: THOC7
subclass of: SO_0000673
so part of: THOC7
location: complement(join(4248219..4248553,4249857..4249926,4250008..4250074,4251338..4251395,4253048..4253134,4253462..4253589,4254991..4255108))
location: region:4248219-4255108:-1
so has part: feature:4254991-4255108:-1:exon
so has part: feature:4253462-4253589:-1:exon
so has part: feature:4253048-4253134:-1:exon
so has part: feature:4251338-4251395:-1:exon
so has part: feature:4250008-4250074:-1:exon
so has part: feature:4249857-4249926:-1:exon
so has part: feature:4248219-4248553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4254991-4255108:-1:exon

position:4254991:-1
position: 4254991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4253462-4253589:-1:exon

position:4253462:-1
position: 4253462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4253589:-1
position: 4253589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4253048-4253134:-1:exon

position:4253048:-1
position: 4253048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4253134:-1
position: 4253134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4251338-4251395:-1:exon

position:4251338:-1
position: 4251338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4251395:-1
position: 4251395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4250008-4250074:-1:exon

position:4250008:-1
position: 4250008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4250074:-1
position: 4250074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4249857-4249926:-1:exon

position:4249857:-1
position: 4249857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4249926:-1
position: 4249926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4248219-4248553:-1:exon

position:4248553:-1
position: 4248553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

THOC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: THOC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THO complex subunit 7 homolog
translation: MLSTLSQCEFSMGKTLLVYDMNLREMENYEKIYKEIECSIAGAHEKIAECKKQILQAKRIRKNRQEYDALAKVIQHHPDRHETLKELEALGKELEHLSHIKESVEDKLELRRKQFHVLLSTIHELQQTLENDEKLSEVEEAQGTSMETDPKP
SIO_010081: THOC7
subclass of: SO_0000673
so part of: THOC7
location: complement(join(4248486..4248553,4249857..4249926,4250008..4250074,4251338..4251395,4253048..4253134,4253462..4253570))
location: region:4248486-4253570:-1
so has part: feature:4253462-4253570:-1:exon
so has part: feature:4253048-4253134:-1:exon
so has part: feature:4251338-4251395:-1:exon
so has part: feature:4250008-4250074:-1:exon
so has part: feature:4249857-4249926:-1:exon
so has part: feature:4248486-4248553:-1:exon

XP_012625377.1
type: Protein
SIO_000068: ncbiprotein

position:4248486:-1
position: 4248486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4253570:-1
position: 4253570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4253462-4253570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4253048-4253134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4251338-4251395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4250008-4250074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4249857-4249926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4248486-4248553:-1:exon

ATXN7
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: ATXN7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4292832..4432801
location: region:4292832-4432801:1
so has part: feature:4292832-4432801:1:exon
subclass of: SO_0000010

105874260
type: Gene
SIO_000068: ncbigene

position:4292832:1
position: 4292832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4432801:1
position: 4432801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4292832-4432801:1:exon

ATXN7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ATXN7
product: ataxin 7
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 87 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_020284677.1
SIO_010081: ATXN7
subclass of: SO_0000673
so part of: ATXN7
location: join(4292832..4295605,4309774..4310033,4310245..4310313,4377979..4378083,4406547..4406799,4409061..4409320,4410277..4410359,4416472..4416737,4418923..4419121,4419360..4419481,4424400..4425345,4429067..4432801)
location: region:4292832-4432801:1
so has part: feature:4292832-4295605:1:exon
so has part: feature:4309774-4310033:1:exon
so has part: feature:4310245-4310313:1:exon
so has part: feature:4377979-4378083:1:exon
so has part: feature:4406547-4406799:1:exon
so has part: feature:4409061-4409320:1:exon
so has part: feature:4410277-4410359:1:exon
so has part: feature:4416472-4416737:1:exon
so has part: feature:4418923-4419121:1:exon
so has part: feature:4419360-4419481:1:exon
so has part: feature:4424400-4425345:1:exon
so has part: feature:4429067-4432801:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4292832-4295605:1:exon

position:4295605:1
position: 4295605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4309774-4310033:1:exon

position:4309774:1
position: 4309774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4310033:1
position: 4310033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4310245-4310313:1:exon

position:4310245:1
position: 4310245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4310313:1
position: 4310313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4377979-4378083:1:exon

position:4377979:1
position: 4377979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4378083:1
position: 4378083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4406547-4406799:1:exon

position:4406547:1
position: 4406547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4406799:1
position: 4406799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4409061-4409320:1:exon

position:4409061:1
position: 4409061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4409320:1
position: 4409320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4410277-4410359:1:exon

position:4410277:1
position: 4410277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4410359:1
position: 4410359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4416472-4416737:1:exon

position:4416472:1
position: 4416472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4416737:1
position: 4416737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4418923-4419121:1:exon

position:4418923:1
position: 4418923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4419121:1
position: 4419121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4419360-4419481:1:exon

position:4419360:1
position: 4419360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4419481:1
position: 4419481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4424400-4425345:1:exon

position:4424400:1
position: 4424400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4425345:1
position: 4425345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4429067-4432801:1:exon

position:4429067:1
position: 4429067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATXN7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ATXN7
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ataxin-7
translation: MSERAAADVRARAAAGGAAXAAPPPAPPRRPAPPPPRRPGRGRRPGAAAMATAAERRPLPSPDALLGQPWNLWVEAAKLPGKDGSELDESLKESGKSREVTGLCREDMPIFGFCPAHDDFYLVVCNDCNQVVKPQAFQSHYERRHSSSSKPSLAVPPTSVFSFFPSLSKSKGGSASGSNRSSSGGVLSTSSSTSKLSKSPKEKPPLRGNTRPMHPIQQSRAPHSRIMTPSVKVEKIHPKVDGAPLKSAVGPPCPATVSSSVKPGLNCPSIPKPTLPSPGQILNGKGLPAPPALEKKSEDSSNNRKFLNKRLSEREFDPDIHCGVIDLDTKKPCTRSLTCKTHSLTQRRAVQGRRKRFDVLLAEHKNKTREKELIRHLDSQQLPQPLRDPHPAPPRPSQEPHPNPHGVTPAESKPFIASKPKPHTPSLPRPPGCPAPQGGSAPVDPPPVHESPHPPLPATEPASRLSSEEGEGDDKEESVEKLDCHYSGHHPQPASFCTFGSRQIGRGYYVFDSRWNRLRCALNLMVEKHLNAQLWKKIPPMPSTAPPVSTRAPHRANAAPPSQCGLSCLAAATASASPVLLSPTCVSPNGKSVPAHGTTLNAQPAASGAMDPVCGMQSRQVSSSSASPSTASGLSSVPSSPMSRKPQKLKSSKALRPKESSGSSTNCHNASSSASGGSGKKRKSSSPLSVHSSSSSCSSSHSMESFRKNCVAHSGPPYPSTVTSPHGVGLNCVAHRANAAGLRHDQPGRGPLGGSPAEPIKRVSVMVNSSDSTLSLGPFVHQSDDGFPHPHAPLDKLLGKKRKCSPSSGGLSGGGKPTKVARVPAMNHVHMKHTATIPGAQGLANSSLLHQPKARP
SIO_010081: ATXN7
subclass of: SO_0000673
so part of: ATXN7
location: join(4309785..4310033,4310245..4310313,4377979..4378083,4406547..4406799,4409061..4409320,4410277..4410359,4416472..4416737,4418923..4419121,4419360..4419481,4424400..4425345,4429067..4429084)
location: region:4309785-4429084:1
so has part: feature:4309785-4310033:1:exon
so has part: feature:4310245-4310313:1:exon
so has part: feature:4377979-4378083:1:exon
so has part: feature:4406547-4406799:1:exon
so has part: feature:4409061-4409320:1:exon
so has part: feature:4410277-4410359:1:exon
so has part: feature:4416472-4416737:1:exon
so has part: feature:4418923-4419121:1:exon
so has part: feature:4419360-4419481:1:exon
so has part: feature:4424400-4425345:1:exon
so has part: feature:4429067-4429084:1:exon

XP_020140266.1
type: Protein
SIO_000068: ncbiprotein

position:4309785:1
position: 4309785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4429084:1
position: 4429084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4309785-4310033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4310245-4310313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4377979-4378083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4406547-4406799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4409061-4409320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4410277-4410359:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4416472-4416737:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4418923-4419121:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4419360-4419481:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4424400-4425345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4429067-4429084:1:exon

LOC105874261
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105874261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4355989..4357322)
location: region:4355989-4357322:-1
so has part: feature:4355989-4357322:-1:exon

105874261
type: Gene
SIO_000068: ncbigene

position:4355989:-1
position: 4355989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4357322:-1
position: 4357322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4355989-4357322:-1:exon

LOC105874261
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105874261
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105874261
subclass of: SO_0000673
so part of: LOC105874261
location: complement(4355989..4357322)
location: region:4355989-4357322:-1
so has part: feature:4355989-4357322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4355989-4357322:-1:exon

LOC109730163
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730163
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4445116..4447857)
location: region:4445116-4447857:-1
so has part: feature:4445116-4447857:-1:exon
subclass of: SO_0000010

109730163
type: Gene
SIO_000068: ncbigene

position:4445116:-1
position: 4445116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4447857:-1
position: 4447857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4445116-4447857:-1:exon

LOC109730163
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC109730163
product: 26S proteasome non-ATPase regulatory subunit 6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 160 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_020284647.1
SIO_010081: LOC109730163
subclass of: SO_0000673
so part of: LOC109730163
location: complement(join(4445116..4445324,4445471..4445548,4447698..4447857))
location: region:4445116-4447857:-1
so has part: feature:4447698-4447857:-1:exon
so has part: feature:4445471-4445548:-1:exon
so has part: feature:4445116-4445324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4447698-4447857:-1:exon

position:4447698:-1
position: 4447698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4445471-4445548:-1:exon

position:4445471:-1
position: 4445471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4445548:-1
position: 4445548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4445116-4445324:-1:exon

position:4445324:-1
position: 4445324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109730163
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC109730163
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 6-like
translation: MKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM
SIO_010081: LOC109730163
subclass of: SO_0000673
so part of: LOC109730163
location: complement(join(4445228..4445324,4445471..4445548,4447698..4447849))
location: region:4445228-4447849:-1
so has part: feature:4447698-4447849:-1:exon
so has part: feature:4445471-4445548:-1:exon
so has part: feature:4445228-4445324:-1:exon

XP_020140236.1
type: Protein
SIO_000068: ncbiprotein

position:4445228:-1
position: 4445228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4447849:-1
position: 4447849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4447698-4447849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4445471-4445548:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4445228-4445324:-1:exon

LOC109730160
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5091939..5132357)
location: region:5091939-5132357:-1
so has part: feature:5091939-5132357:-1:exon
subclass of: SO_0000010

109730160
type: Gene
SIO_000068: ncbigene

position:5091939:-1
position: 5091939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5132357:-1
position: 5132357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5091939-5132357:-1:exon

LOC109730160
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC109730160
product: A disintegrin and metalloproteinase with thrombospondin motifs 9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_020284621.1
SIO_010081: LOC109730160
subclass of: SO_0000673
so part of: LOC109730160
location: complement(join(5091939..5092020,5096972..5097077,5097225..5097265,5098763..5098878,5098982..5099065,5101446..5101735,5124677..5124839,5131205..5131602,5132183..5132357))
location: region:5091939-5132357:-1
so has part: feature:5132183-5132357:-1:exon
so has part: feature:5131205-5131602:-1:exon
so has part: feature:5124677-5124839:-1:exon
so has part: feature:5101446-5101735:-1:exon
so has part: feature:5098982-5099065:-1:exon
so has part: feature:5098763-5098878:-1:exon
so has part: feature:5097225-5097265:-1:exon
so has part: feature:5096972-5097077:-1:exon
so has part: feature:5091939-5092020:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5132183-5132357:-1:exon

position:5132183:-1
position: 5132183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5131205-5131602:-1:exon

position:5131205:-1
position: 5131205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5131602:-1
position: 5131602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5124677-5124839:-1:exon

position:5124677:-1
position: 5124677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5124839:-1
position: 5124839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5101446-5101735:-1:exon

position:5101446:-1
position: 5101446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5101735:-1
position: 5101735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5098982-5099065:-1:exon

position:5098982:-1
position: 5098982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5099065:-1
position: 5099065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5098763-5098878:-1:exon

position:5098763:-1
position: 5098763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5098878:-1
position: 5098878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5097225-5097265:-1:exon

position:5097225:-1
position: 5097225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5097265:-1
position: 5097265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5096972-5097077:-1:exon

position:5096972:-1
position: 5096972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5097077:-1
position: 5097077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5091939-5092020:-1:exon

position:5092020:-1
position: 5092020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109730160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC109730160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A disintegrin and metalloproteinase with thrombospondin motifs 9-like
translation: MQFVPWATLLTLLLRDLAEMRSPDAAAAVRKDRLHPRQAKLLETLGEYEIASPVRVDALGEPFPTDVHFKRRRRSVNAATDPWPASSSSSSSSSPRAHYRLSAFGQQFLFNLTAHSGFIAPLFTVTLLGAPGANQTGFYSEEETALEHCFYKGHVNTRAEHTAVISLCSGMLGTFRSHDGDYFIEPLLSTGEQEDTEEQNKPHIIYRRSTPQREPATGRHACGTPEHKSSRHKDKRKPGAIKWGGRSNLAEDVAELSLGLATKGLSAYGNKTESAGGPRTHSRTKRFLSYPRFVEVMVVADNKMVLYHGANLQHYILTLMSIVASIYKDPSIGNLINIVIVNLVVIHNEQDGPSISFNAQTTLKNFCLWQHSKNYPGGIHHDTAVLVTRQDICRAHDKCDTLGLAELGTICDPYRSCSITEDSGLSTAFTIAHELGHVFNMPHDDNNKCKEEGVKSPQHVMAPT
SIO_010081: LOC109730160
subclass of: SO_0000673
so part of: LOC109730160
location: complement(join(5091939..5092020,5096972..5097077,5097225..5097265,5098763..5098878,5098982..5099065,5101446..5101735,5124677..5124839,5131205..5131602,5132183..5132297))
location: region:5091939-5132297:-1
so has part: feature:5132183-5132297:-1:exon
so has part: feature:5131205-5131602:-1:exon
so has part: feature:5124677-5124839:-1:exon
so has part: feature:5101446-5101735:-1:exon
so has part: feature:5098982-5099065:-1:exon
so has part: feature:5098763-5098878:-1:exon
so has part: feature:5097225-5097265:-1:exon
so has part: feature:5096972-5097077:-1:exon
so has part: feature:5091939-5092020:-1:exon

XP_020140210.1
type: Protein
SIO_000068: ncbiprotein

position:5132297:-1
position: 5132297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5132183-5132297:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5131205-5131602:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5124677-5124839:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5101446-5101735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5098982-5099065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5098763-5098878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5097225-5097265:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5096972-5097077:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5091939-5092020:-1:exon

LOC105879128
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105879128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5159787..5399420
location: region:5159787-5399420:1
so has part: feature:5159787-5399420:1:exon
subclass of: SO_0000011

105879128
type: Gene
SIO_000068: ncbigene

position:5159787:1
position: 5159787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5399420:1
position: 5399420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5159787-5399420:1:exon

LOC105879128
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105879128
product: uncharacterized LOC105879128, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001157646.1
SIO_010081: LOC105879128
subclass of: SO_0000673
so part of: LOC105879128
location: join(5159787..5160767,5162235..5162459,5213234..5213490,5304542..5304596,5396056..5399420)
location: region:5159787-5399420:1
so has part: feature:5159787-5160767:1:exon
so has part: feature:5162235-5162459:1:exon
so has part: feature:5213234-5213490:1:exon
so has part: feature:5304542-5304596:1:exon
so has part: feature:5396056-5399420:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5159787-5160767:1:exon

position:5160767:1
position: 5160767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5162235-5162459:1:exon

position:5162235:1
position: 5162235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5162459:1
position: 5162459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5213234-5213490:1:exon

position:5213234:1
position: 5213234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5213490:1
position: 5213490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5304542-5304596:1:exon

position:5304542:1
position: 5304542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5304596:1
position: 5304596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5396056-5399420:1:exon

position:5396056:1
position: 5396056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105879128
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105879128
product: uncharacterized LOC105879128, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_001157648.2
SIO_010081: LOC105879128
subclass of: SO_0000673
so part of: LOC105879128
location: join(5209194..5209600,5213234..5213490,5304542..5304596,5396056..5399420)
location: region:5209194-5399420:1
so has part: feature:5209194-5209600:1:exon
so has part: feature:5213234-5213490:1:exon
so has part: feature:5304542-5304596:1:exon
so has part: feature:5396056-5399420:1:exon

position:5209194:1
position: 5209194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5209194-5209600:1:exon

position:5209600:1
position: 5209600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5213234-5213490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5304542-5304596:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5396056-5399420:1:exon

LOC109730168
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5406544..5410815)
location: region:5406544-5410815:-1
so has part: feature:5406544-5410815:-1:exon
subclass of: SO_0000011

109730168
type: Gene
SIO_000068: ncbigene

position:5406544:-1
position: 5406544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5410815:-1
position: 5410815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5406544-5410815:-1:exon

LOC109730168
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC109730168
product: uncharacterized LOC109730168
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222894.1
SIO_010081: LOC109730168
subclass of: SO_0000673
so part of: LOC109730168
location: complement(join(5406544..5406888,5410373..5410815))
location: region:5406544-5410815:-1
so has part: feature:5410373-5410815:-1:exon
so has part: feature:5406544-5406888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5410373-5410815:-1:exon

position:5410373:-1
position: 5410373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5406544-5406888:-1:exon

position:5406888:-1
position: 5406888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109730167
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730167
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5446503..5464075
location: region:5446503-5464075:1
so has part: feature:5446503-5464075:1:exon
subclass of: SO_0000011

109730167
type: Gene
SIO_000068: ncbigene

position:5446503:1
position: 5446503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5464075:1
position: 5464075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5446503-5464075:1:exon

LOC109730167
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC109730167
product: uncharacterized LOC109730167, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222892.1
SIO_010081: LOC109730167
subclass of: SO_0000673
so part of: LOC109730167
location: join(5446503..5446700,5449269..5449483,5450990..5451081,5453490..5454537,5463776..5464075)
location: region:5446503-5464075:1
so has part: feature:5446503-5446700:1:exon
so has part: feature:5449269-5449483:1:exon
so has part: feature:5450990-5451081:1:exon
so has part: feature:5453490-5454537:1:exon
so has part: feature:5463776-5464075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5446503-5446700:1:exon

position:5446700:1
position: 5446700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5449269-5449483:1:exon

position:5449269:1
position: 5449269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5449483:1
position: 5449483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5450990-5451081:1:exon

position:5450990:1
position: 5450990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5451081:1
position: 5451081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5453490-5454537:1:exon

position:5453490:1
position: 5453490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5454537:1
position: 5454537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5463776-5464075:1:exon

position:5463776:1
position: 5463776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109730167
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC109730167
product: uncharacterized LOC109730167, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002222893.1
SIO_010081: LOC109730167
subclass of: SO_0000673
so part of: LOC109730167
location: join(5446503..5446700,5449269..5449483,5450990..5451081,5463776..5464075)
location: region:5446503-5464075:1
so has part: feature:5446503-5446700:1:exon
so has part: feature:5449269-5449483:1:exon
so has part: feature:5450990-5451081:1:exon
so has part: feature:5463776-5464075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5446503-5446700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5449269-5449483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5450990-5451081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5463776-5464075:1:exon

LOC105879120
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105879120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5493853..5524602
location: region:5493853-5524602:1
so has part: feature:5493853-5524602:1:exon
subclass of: SO_0000011

105879120
type: Gene
SIO_000068: ncbigene

position:5493853:1
position: 5493853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5524602:1
position: 5524602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5493853-5524602:1:exon

LOC105879120
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105879120
product: uncharacterized LOC105879120
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001157642.1
SIO_010081: LOC105879120
subclass of: SO_0000673
so part of: LOC105879120
location: join(5493853..5494046,5518927..5519088,5524181..5524602)
location: region:5493853-5524602:1
so has part: feature:5493853-5494046:1:exon
so has part: feature:5518927-5519088:1:exon
so has part: feature:5524181-5524602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5493853-5494046:1:exon

position:5494046:1
position: 5494046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5518927-5519088:1:exon

position:5518927:1
position: 5518927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5519088:1
position: 5519088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5524181-5524602:1:exon

position:5524181:1
position: 5524181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105879139
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105879139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5658451..5660806)
location: region:5658451-5660806:-1
so has part: feature:5658451-5660806:-1:exon

105879139
type: Gene
SIO_000068: ncbigene

position:5658451:-1
position: 5658451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5660806:-1
position: 5660806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5658451-5660806:-1:exon

LOC105879139
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105879139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC105879139
subclass of: SO_0000673
so part of: LOC105879139
location: complement(5658451..5658986)
location: region:5658451-5658986:-1
so has part: feature:5658451-5658986:-1:exon

position:5658986:-1
position: 5658986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5658451-5658986:-1:exon

LOC105879139
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105879139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC105879139
subclass of: SO_0000673
so part of: LOC105879139
location: complement(5660604..5660806)
location: region:5660604-5660806:-1
so has part: feature:5660604-5660806:-1:exon

position:5660604:-1
position: 5660604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5660604-5660806:-1:exon

MAGI1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5694201..6487706)
location: region:5694201-6487706:-1
so has part: feature:5694201-6487706:-1:exon
subclass of: SO_0000010

105879085
type: Gene
SIO_000068: ncbigene

position:5694201:-1
position: 5694201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6487706:-1
position: 6487706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5694201-6487706:-1:exon

MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_020284662.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5694201..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831512,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487706))
location: region:5694201-6487706:-1
so has part: feature:6487372-6487706:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831512:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815939:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5694201-5697814:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487706:-1:exon

position:6487372:-1
position: 6487372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

position:6015075:-1
position: 6015075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6015191:-1
position: 6015191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

position:5860081:-1
position: 5860081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5860200:-1
position: 5860200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

position:5840368:-1
position: 5840368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5840574:-1
position: 5840574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831512:-1:exon

position:5831308:-1
position: 5831308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5831512:-1
position: 5831512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

position:5820493:-1
position: 5820493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5820575:-1
position: 5820575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815939:-1:exon

position:5815901:-1
position: 5815901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5815939:-1
position: 5815939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

position:5810340:-1
position: 5810340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5810397:-1
position: 5810397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

position:5807405:-1
position: 5807405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5807508:-1
position: 5807508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

position:5805413:-1
position: 5805413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5805505:-1
position: 5805505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

position:5798402:-1
position: 5798402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5798584:-1
position: 5798584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

position:5796892:-1
position: 5796892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5797512:-1
position: 5797512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

position:5766488:-1
position: 5766488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5766519:-1
position: 5766519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

position:5756443:-1
position: 5756443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5756659:-1
position: 5756659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5752366-5752449:-1:exon

position:5752366:-1
position: 5752366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5752449:-1
position: 5752449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5749030-5749121:-1:exon

position:5749030:-1
position: 5749030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5749121:-1
position: 5749121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5747374-5747566:-1:exon

position:5747374:-1
position: 5747374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5747566:-1
position: 5747566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5744042-5744338:-1:exon

position:5744042:-1
position: 5744042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5744338:-1
position: 5744338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5705866-5705959:-1:exon

position:5705866:-1
position: 5705866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5705959:-1
position: 5705959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5705679-5705733:-1:exon

position:5705679:-1
position: 5705679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5705733:-1
position: 5705733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5704366-5704509:-1:exon

position:5704366:-1
position: 5704366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5704509:-1
position: 5704509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5701746-5701884:-1:exon

position:5701746:-1
position: 5701746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5701884:-1
position: 5701884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5694201-5697814:-1:exon

position:5697814:-1
position: 5697814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020284665.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5694201..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5744042..5744338,5747374..5747566,5749030..5749121,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487705))
location: region:5694201-6487705:-1
so has part: feature:6487372-6487705:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5694201-5697814:-1:exon

position:6487705:-1
position: 6487705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

position:5831509:-1
position: 5831509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5694201-5697814:-1:exon

MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020284658.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5694201..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739688,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487705))
location: region:5694201-6487705:-1
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020284657.1
SIO_010081: MAGI1
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_020284651.1
SIO_010081: MAGI1
subclass of: SO_0000673
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020284655.1
SIO_010081: MAGI1
subclass of: SO_0000673
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_020284650.1
SIO_010081: MAGI1
subclass of: SO_0000673
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020284659.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
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location: region:5694201-6487705:-1
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_020284654.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5694201..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739655,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831512,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487705))
location: region:5694201-6487705:-1
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position:5739655:-1
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type: ReverseStrandPosition
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 66 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_020284652.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5694201..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739688,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831512,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487705))
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_020284649.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 81 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_020284661.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
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position:6487704:-1
position: 6487704
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 80 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020284660.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5694201..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815936,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487704))
location: region:5694201-6487704:-1
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urn:…
SIO_000300: 23
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 79 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_020284656.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5694201..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739655,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815936,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487704))
location: region:5694201-6487704:-1
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urn:…
SIO_000300: 24
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 80 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_020284653.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5694201..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815936,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487704))
location: region:5694201-6487704:-1
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284663.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5694201..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831512,5840368..5840574,5860081..5860200,6015075..6015191,6021995..6022373))
location: region:5694201-6022373:-1
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position:6022373:-1
position: 6022373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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position:6021995:-1
position: 6021995
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type: ReverseStrandPosition
type: ExactPosition

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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020284667.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5694201..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,5924244..5924435))
location: region:5694201-5924435:-1
so has part: feature:5924244-5924435:-1:exon
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position:5924435:-1
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type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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position:5924244:-1
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reference: sequence
type: ReverseStrandPosition
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SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:5694201-5697814:-1:exon

MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284664.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5694201..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831512,5840368..5840574,5860081..5860200,5860640..5861017))
location: region:5694201-5861017:-1
so has part: feature:5860640-5861017:-1:exon
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position:5861017:-1
position: 5861017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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position:5860640:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 23
SIO_000628: feature:5694201-5697814:-1:exon

MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284668.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5694201..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,5860304..5860561))
location: region:5694201-5860561:-1
so has part: feature:5860304-5860561:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
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so has part: feature:5694201-5697814:-1:exon

position:5860561:-1
position: 5860561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5860304-5860561:-1:exon

position:5860304:-1
position: 5860304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:5694201-5697814:-1:exon

MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_020284666.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5694201..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831512,5840368..5840574,5853425..5853531))
location: region:5694201-5853531:-1
so has part: feature:5853425-5853531:-1:exon
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so has part: feature:5694201-5697814:-1:exon

position:5853531:-1
position: 5853531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5853425-5853531:-1:exon

position:5853425:-1
position: 5853425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 22
SIO_000628: feature:5694201-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X17
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRLPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5744042..5744338,5747374..5747566,5749030..5749121,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5696934-6487660:-1
so has part: feature:6487372-6487660:-1:exon
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so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140254.1
type: Protein
SIO_000068: ncbiprotein

position:5696934:-1
position: 5696934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6487660:-1
position: 6487660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

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SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X10
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739688,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5696934-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739688:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5739488-5739688:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X9
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5696934-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X13
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRLPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739688,5744042..5744338,5747374..5747566,5749030..5749121,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815936,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5696934-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815936:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739688:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5739488-5739688:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X12
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRLPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815936,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5696934-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815936:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X8
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739655,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815936,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5696934-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815936:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739655:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5739488-5739655:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X5
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815936,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5696934-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815936:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X3
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5696934-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815939:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X7
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTAADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5820493..5820575,5831308..5831512,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5696934-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831512:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X2
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTAADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815936,5820493..5820575,5831308..5831512,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5696934-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831512:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815936:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X11
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTAADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRLPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831512,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5696934-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831512:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815939:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X14
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTAADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831512,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5696934-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831512:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815939:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X6
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTAADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739655,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831512,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5696934-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831512:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815939:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739655:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5739488-5739655:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X4
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTAADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739688,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831512,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5696934-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831512:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815939:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739688:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5739488-5739688:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X1
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTAADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831512,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5696934-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831512:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815939:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X15
translation: MGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTAADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831512,5840368..5840574,5860081..5860200,6015075..6015191,6021995..6021998))
location: region:5696934-6021998:-1
so has part: feature:6021995-6021998:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831512:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815939:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140252.1
type: Protein
SIO_000068: ncbiprotein

position:6021998:-1
position: 6021998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6021995-6021998:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X16
translation: MSNHRSWAIAFLQWRVDAVGVIFFKGLITSELAGGTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTAADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831512,5840368..5840574,5860081..5860200,5860640..5860742))
location: region:5696934-5860742:-1
so has part: feature:5860640-5860742:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831512:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815939:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140253.1
type: Protein
SIO_000068: ncbiprotein

position:5860742:-1
position: 5860742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5860640-5860742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5831308-5831512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5815901-5815939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X19
translation: MQNAGVVPAENEEEDDVPEMNSSFTADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831509,5840368..5840443))
location: region:5696934-5840443:-1
so has part: feature:5840368-5840443:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815939:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140256.1
type: Protein
SIO_000068: ncbiprotein

position:5840443:-1
position: 5840443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5840368-5840443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5815901-5815939:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X19
translation: MQNAGVVPAENEEEDDVPEMNSSFTADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831509,5840368..5840443))
location: region:5696934-5840443:-1
so has part: feature:5840368-5840443:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815939:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5696934-5697814:-1:exon

XP_020140257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5840368-5840443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5815901-5815939:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5696934-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X18
translation: MQNAGVVPAENEEEDDVPEMNSSFTAADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYDPSSERGGPAGPPGVAEVRAAPGGRRRPASPESGCAPEPRVSPQRGDRRAHGKDARGGREHHTWNGACRRPGGGARRDAERRDPERTATERRDAERTATERRDPERTATERRDPERTATERRDPERTATECRDPERTATERTATERTATERRDPERRDARATERTATAGPGRRPPEKRADGTRSADTTLERRDRPERRRERSPTRRRDGSPGRRRRSLERPPDPRSPERRAKSSDRRRERSLDKRGGEDRAGPRDRDRDRDDAHPRHEAGRSSRHAPEHRRRPYKECSTDLSI
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5696934..5697814,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831512,5840368..5840443))
location: region:5696934-5840443:-1
so has part: feature:5840368-5840443:-1:exon
so has part: feature:5831308-5831512:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815939:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
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XP_020140255.1
type: Protein
SIO_000068: ncbiprotein

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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020284669.1
SIO_010081: MAGI1
subclass of: SO_0000673
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X26
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284675.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 42 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020284670.1
SIO_010081: MAGI1
subclass of: SO_0000673
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MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 40 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020284673.1
SIO_010081: MAGI1
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urn:…
SIO_000300: 22
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5699650-5699738:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5697703-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X25
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRLPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYAMIPPNIAACMRIEKPGEACFHLMGHNQTTTPAASAAAPPGHQALRK
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5697761..5697814,5699650..5699738,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5744042..5744338,5747374..5747566,5749030..5749121,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5697761-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5699650-5699738:-1:exon
so has part: feature:5697761-5697814:-1:exon

XP_020140264.1
type: Protein
SIO_000068: ncbiprotein

position:5697761:-1
position: 5697761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5699650-5699738:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5697761-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X21
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYAMIPPNIAACMRIEKPGEACFHLMGHNQTTTPAASAAAPPGHQALRK
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5697761..5697814,5699650..5699738,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739688,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815936,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5697761-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815936:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739688:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5699650-5699738:-1:exon
so has part: feature:5697761-5697814:-1:exon

XP_020140259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5739488-5739688:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5699650-5699738:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5697761-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X24
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYAMIPPNIAACMRIEKPGEACFHLMGHNQTTTPAASAAAPPGHQALRK
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5697761..5697814,5699650..5699738,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815936,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5697761-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815936:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5699650-5699738:-1:exon
so has part: feature:5697761-5697814:-1:exon

XP_020140262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5699650-5699738:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5697761-5697814:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X20
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTAADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYAMIPPNIAACMRIEKPGEACFHLMGHNQTTTPAASAAAPPGHQALRK
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5697761..5697814,5699650..5699738,5701746..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815939,5820493..5820575,5831308..5831512,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5697761-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831512:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815939:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701746-5701884:-1:exon
so has part: feature:5699650-5699738:-1:exon
so has part: feature:5697761-5697814:-1:exon

XP_020140258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5701746-5701884:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5699650-5699738:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5697761-5697814:-1:exon

MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 37 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020284672.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5700929..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5744042..5744338,5747374..5747566,5749030..5749121,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815936,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487702))
location: region:5700929-6487702:-1
so has part: feature:6487372-6487702:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815936:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5700929-5701884:-1:exon

position:5700929:-1
position: 5700929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487702:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5700929-5701884:-1:exon

MAGI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAGI1
product: membrane associated guanylate kinase, WW and PDZ domain containing 1, transcript variant X23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 40 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_020284671.1
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5700929..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815936,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487701))
location: region:5700929-6487701:-1
so has part: feature:6487372-6487701:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815936:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5700929-5701884:-1:exon

position:6487701:-1
position: 6487701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487701:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5700929-5701884:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X23
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRLPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYGGSNYENAPSFPGMTP
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5701696..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5744042..5744338,5747374..5747566,5749030..5749121,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815936,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5701696-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815936:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701696-5701884:-1:exon

XP_020140261.1
type: Protein
SIO_000068: ncbiprotein

position:5701696:-1
position: 5701696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5701696-5701884:-1:exon

MAGI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAGI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X22
translation: MSKVIQKKSHWTGRVRECTVRRGPRGELGLAVLGGAEHGEFAFVGAAEAAARAAGLGEGELLLEVQGVRVSGLPRYDVLGVLGSCGDAVTFKAVRQGGRLNKDLRHFLSQRFQKGSPDHELQQTIRDNLYRHAVPCTTRSPREGEVPGVDYNFLTVKEFLDLEQSGTLLEVGTYEGNYYGTPKPPNQPVSGKVITTDALQSLQSGSKQATPKRTKSYNDMQNAGVVPAENEEEDDVPEMNSSFTADSGEQDEHTLQETALPPANSSILAAPITDPSQKFPQYLPLSAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQQKPLEECEDDEGVHTEELDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQQQQPQQPQPQQKTEEWTEEHSSLVPPVIPNHPPSNPEPAREPPLQGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAISDKEPIIVNGQETYDSPASHSSKTGKANGTKDARPSSPADMAPDGPHGYPSDTVSLASSIATQPELITVHIIKGPMGFGFTIADSPGGGGQRVKQIVDSPRCRGLKEGDLIVEVNKKNVQALTHNQVVDMLIECPKGSEVTLLVQRGGLPVPKKSPKSQPLERKDSQNSSQHSVSSHRSLHTASPSHSTQALPAFPPVEAPAADQTDSSGQKKPDPFKIWAQSRSMYENRPMSPSPASGLSKGEREREVNSTSFGECQIPDYQEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRRKAVFAAPKAESEAPSPASSQHSGTQPASLAEGKRTPQGSQNSLSTVSSGSGSTSGIGSGGGGGSGVVSAALVQPYDVDIRRGDSEGFGFVIVSSVSRPEAGTTFAGNACAAMPHKIGRIIERSPADRCGRLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNATLLTNAEKIATITTTHAPSQQGAQETRSTTKPKQESQFEFKASTQEQDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELIKSGGRRVRLFLMRGDGSVPEYGGSNYENAPSFPGMTP
SIO_010081: MAGI1
subclass of: SO_0000673
so part of: MAGI1
location: complement(join(5701696..5701884,5704366..5704509,5705679..5705733,5705866..5705959,5739488..5739691,5744042..5744338,5747374..5747566,5749030..5749121,5752366..5752449,5756443..5756659,5766488..5766519,5796892..5797512,5798402..5798584,5805413..5805505,5807405..5807508,5810340..5810397,5815901..5815936,5820493..5820575,5831308..5831509,5840368..5840574,5860081..5860200,6015075..6015191,6487372..6487660))
location: region:5701696-6487660:-1
so has part: feature:6487372-6487660:-1:exon
so has part: feature:6015075-6015191:-1:exon
so has part: feature:5860081-5860200:-1:exon
so has part: feature:5840368-5840574:-1:exon
so has part: feature:5831308-5831509:-1:exon
so has part: feature:5820493-5820575:-1:exon
so has part: feature:5815901-5815936:-1:exon
so has part: feature:5810340-5810397:-1:exon
so has part: feature:5807405-5807508:-1:exon
so has part: feature:5805413-5805505:-1:exon
so has part: feature:5798402-5798584:-1:exon
so has part: feature:5796892-5797512:-1:exon
so has part: feature:5766488-5766519:-1:exon
so has part: feature:5756443-5756659:-1:exon
so has part: feature:5752366-5752449:-1:exon
so has part: feature:5749030-5749121:-1:exon
so has part: feature:5747374-5747566:-1:exon
so has part: feature:5744042-5744338:-1:exon
so has part: feature:5739488-5739691:-1:exon
so has part: feature:5705866-5705959:-1:exon
so has part: feature:5705679-5705733:-1:exon
so has part: feature:5704366-5704509:-1:exon
so has part: feature:5701696-5701884:-1:exon

XP_020140260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6487372-6487660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6015075-6015191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860081-5860200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5840368-5840574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831308-5831509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5820493-5820575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5815901-5815936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5810340-5810397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5807405-5807508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5805413-5805505:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5798402-5798584:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796892-5797512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5766488-5766519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5756443-5756659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5752366-5752449:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5749030-5749121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5747374-5747566:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5744042-5744338:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5739488-5739691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5705866-5705959:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5705679-5705733:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5704366-5704509:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5701696-5701884:-1:exon

LOC105879074
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105879074
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6515161..6616128
location: region:6515161-6616128:1
so has part: feature:6515161-6616128:1:exon
subclass of: SO_0000011

105879074
type: Gene
SIO_000068: ncbigene

position:6515161:1
position: 6515161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6616128:1
position: 6616128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6515161-6616128:1:exon

LOC105879074
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105879074
product: uncharacterized LOC105879074, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001157626.2
SIO_010081: LOC105879074
subclass of: SO_0000673
so part of: LOC105879074
location: join(6515161..6515785,6522590..6522689,6538213..6538279,6579346..6579449,6589233..6589362,6616063..6616128)
location: region:6515161-6616128:1
so has part: feature:6515161-6515785:1:exon
so has part: feature:6522590-6522689:1:exon
so has part: feature:6538213-6538279:1:exon
so has part: feature:6579346-6579449:1:exon
so has part: feature:6589233-6589362:1:exon
so has part: feature:6616063-6616128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6515161-6515785:1:exon

position:6515785:1
position: 6515785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6522590-6522689:1:exon

position:6522590:1
position: 6522590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6522689:1
position: 6522689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6538213-6538279:1:exon

position:6538213:1
position: 6538213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6538279:1
position: 6538279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6579346-6579449:1:exon

position:6579346:1
position: 6579346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6579449:1
position: 6579449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6589233-6589362:1:exon

position:6589233:1
position: 6589233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6589362:1
position: 6589362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6616063-6616128:1:exon

position:6616063:1
position: 6616063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105879074
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105879074
product: uncharacterized LOC105879074, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001157627.2
SIO_010081: LOC105879074
subclass of: SO_0000673
so part of: LOC105879074
location: join(6515161..6515785,6522590..6522689,6538213..6538279,6579346..6579449,6589238..6589362,6616063..6616128)
location: region:6515161-6616128:1
so has part: feature:6515161-6515785:1:exon
so has part: feature:6522590-6522689:1:exon
so has part: feature:6538213-6538279:1:exon
so has part: feature:6579346-6579449:1:exon
so has part: feature:6589238-6589362:1:exon
so has part: feature:6616063-6616128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6515161-6515785:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6522590-6522689:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6538213-6538279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6579346-6579449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6589238-6589362:1:exon

position:6589238:1
position: 6589238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6616063-6616128:1:exon

LOC109730164
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6616241..6622931)
location: region:6616241-6622931:-1
so has part: feature:6616241-6622931:-1:exon
subclass of: SO_0000011

109730164
type: Gene
SIO_000068: ncbigene

position:6616241:-1
position: 6616241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6622931:-1
position: 6622931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6616241-6622931:-1:exon

LOC109730164
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC109730164
product: uncharacterized LOC109730164
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002222885.1
SIO_010081: LOC109730164
subclass of: SO_0000673
so part of: LOC109730164
location: complement(join(6616241..6616303,6618169..6618211,6622870..6622931))
location: region:6616241-6622931:-1
so has part: feature:6622870-6622931:-1:exon
so has part: feature:6618169-6618211:-1:exon
so has part: feature:6616241-6616303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6622870-6622931:-1:exon

position:6622870:-1
position: 6622870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6618169-6618211:-1:exon

position:6618169:-1
position: 6618169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6618211:-1
position: 6618211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6616241-6616303:-1:exon

position:6616303:-1
position: 6616303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105878883
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105878883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6670220..6717816)
location: region:6670220-6717816:-1
so has part: feature:6670220-6717816:-1:exon
subclass of: SO_0000010

105878883
type: Gene
SIO_000068: ncbigene

position:6670220:-1
position: 6670220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6717816:-1
position: 6717816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6670220-6717816:-1:exon

LOC105878883
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105878883
product: adenomatous polyposis coli protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284622.1
SIO_010081: LOC105878883
subclass of: SO_0000673
so part of: LOC105878883
location: complement(join(6670220..6670363,6672799..6672886,6673170..6673251,6673361..6673411,6674667..6674922,6676475..6676605,6678255..6678520,6678637..6678711,6703617..6703806,6706781..6707193,6717218..6717657,6717706..6717816))
location: region:6670220-6717816:-1
so has part: feature:6717706-6717816:-1:exon
so has part: feature:6717218-6717657:-1:exon
so has part: feature:6706781-6707193:-1:exon
so has part: feature:6703617-6703806:-1:exon
so has part: feature:6678637-6678711:-1:exon
so has part: feature:6678255-6678520:-1:exon
so has part: feature:6676475-6676605:-1:exon
so has part: feature:6674667-6674922:-1:exon
so has part: feature:6673361-6673411:-1:exon
so has part: feature:6673170-6673251:-1:exon
so has part: feature:6672799-6672886:-1:exon
so has part: feature:6670220-6670363:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6717706-6717816:-1:exon

position:6717706:-1
position: 6717706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6717218-6717657:-1:exon

position:6717218:-1
position: 6717218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6717657:-1
position: 6717657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6706781-6707193:-1:exon

position:6706781:-1
position: 6706781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6707193:-1
position: 6707193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6703617-6703806:-1:exon

position:6703617:-1
position: 6703617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6703806:-1
position: 6703806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6678637-6678711:-1:exon

position:6678637:-1
position: 6678637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6678711:-1
position: 6678711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6678255-6678520:-1:exon

position:6678255:-1
position: 6678255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6678520:-1
position: 6678520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6676475-6676605:-1:exon

position:6676475:-1
position: 6676475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6676605:-1
position: 6676605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6674667-6674922:-1:exon

position:6674667:-1
position: 6674667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6674922:-1
position: 6674922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6673361-6673411:-1:exon

position:6673361:-1
position: 6673361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6673411:-1
position: 6673411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6673170-6673251:-1:exon

position:6673170:-1
position: 6673170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6673251:-1
position: 6673251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6672799-6672886:-1:exon

position:6672799:-1
position: 6672799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6672886:-1
position: 6672886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6670220-6670363:-1:exon

position:6670363:-1
position: 6670363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105878883
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105878883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenomatous polyposis coli protein 2-like
translation: MEGDLSDLELQLGHATQQATEAQVATWLLQAQLKEEQAQALERWAALSASELEELWAALKQGERRLAEQELLEATKRLNLLHSQNTGLLNQKKQLKVDLAHLSGEAEKAKKAITNATMMAEELKKEQDTSAHLERKTLEQMMWELQAQLEAEQAALRGERQVPMGVLVQTVGPWQRPVACLSKRGREAEEREAPPRPLARLREASRKNPGDRPPRLQPARRGAGSESASPASTALFSARAPRHRPGAARAAEGCPAAWCPRPRAKPTARASLREPRDAAPASALPPAGGSQAVAAARCGNRAFEPAPRGRLPLVPAGRPVLANADGTRRLSHRARCSRGPSEQASTRLRTGAHVQRQNGDGQSARTPLPPHRPPTAQTPPAGALGSASFPQGTGAASLARRSVAVQTPACWGPPGRPGDSPAGAEAGREDVCTPGRPSSTLCRELGGLRLLGVGVPATPLSARAALRTFLLDSSHRARAGAAPGHGTLPATASRGRPRACSCGTCSKSPRGAVSAGWSAASMREPGGAFPVGRVNQGPQKTQPGKAAPGRPDSASSEEAYVFVHPGPCASLASEREGADVRVSTSPGRRHSALHGSLPTALPGHRGPSQGRELLPPPVDRSLKPGQKSTVGSEDVTLRPVTVGKDPAPLSLRSVAVVGECSSTSPATRSGPGRSSPSHGPVPAQTGAGAASGDSAGSPEPVPPQSAVPPHEEVHYVQVDEEKTQALQKTAQDWARLRQAAEPSRGAEL
SIO_010081: LOC105878883
subclass of: SO_0000673
so part of: LOC105878883
location: complement(join(6670220..6670363,6672799..6672886,6673170..6673251,6673361..6673411,6674667..6674922,6676475..6676605,6678255..6678520,6678637..6678711,6703617..6703806,6706781..6707193,6717218..6717657,6717706..6717816))
location: region:6670220-6717816:-1
so has part: feature:6717706-6717816:-1:exon
so has part: feature:6717218-6717657:-1:exon
so has part: feature:6706781-6707193:-1:exon
so has part: feature:6703617-6703806:-1:exon
so has part: feature:6678637-6678711:-1:exon
so has part: feature:6678255-6678520:-1:exon
so has part: feature:6676475-6676605:-1:exon
so has part: feature:6674667-6674922:-1:exon
so has part: feature:6673361-6673411:-1:exon
so has part: feature:6673170-6673251:-1:exon
so has part: feature:6672799-6672886:-1:exon
so has part: feature:6670220-6670363:-1:exon

XP_020140211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6717706-6717816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6717218-6717657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6706781-6707193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6703617-6703806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6678637-6678711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6678255-6678520:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6676475-6676605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6674667-6674922:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6673361-6673411:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6673170-6673251:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6672799-6672886:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6670220-6670363:-1:exon

LOC109730169
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730169
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6907876..6914058)
location: region:6907876-6914058:-1
so has part: feature:6907876-6914058:-1:exon
subclass of: SO_0000011

109730169
type: Gene
SIO_000068: ncbigene

position:6907876:-1
position: 6907876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6914058:-1
position: 6914058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6907876-6914058:-1:exon

LOC109730169
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC109730169
product: uncharacterized LOC109730169
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002222895.1
SIO_010081: LOC109730169
subclass of: SO_0000673
so part of: LOC109730169
location: complement(join(6907876..6908181,6913897..6914058))
location: region:6907876-6914058:-1
so has part: feature:6913897-6914058:-1:exon
so has part: feature:6907876-6908181:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6913897-6914058:-1:exon

position:6913897:-1
position: 6913897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6907876-6908181:-1:exon

position:6908181:-1
position: 6908181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105885881
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105885881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7044153..7045450
location: region:7044153-7045450:1
so has part: feature:7044153-7045450:1:exon

105885881
type: Gene
SIO_000068: ncbigene

position:7044153:1
position: 7044153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7045450:1
position: 7045450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7044153-7045450:1:exon

LOC105885881
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105885881
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105885881
subclass of: SO_0000673
so part of: LOC105885881
location: 7044153..7045450
location: region:7044153-7045450:1
so has part: feature:7044153-7045450:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7044153-7045450:1:exon

LOC105856207
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105856207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7532180..7533497
location: region:7532180-7533497:1
so has part: feature:7532180-7533497:1:exon
subclass of: SO_0000011

105856207
type: Gene
SIO_000068: ncbigene

position:7532180:1
position: 7532180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7533497:1
position: 7533497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7532180-7533497:1:exon

LOC105856207
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105856207
product: uncharacterized LOC105856207
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001147015.1
SIO_010081: LOC105856207
subclass of: SO_0000673
so part of: LOC105856207
location: join(7532180..7532453,7533417..7533497)
location: region:7532180-7533497:1
so has part: feature:7532180-7532453:1:exon
so has part: feature:7533417-7533497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7532180-7532453:1:exon

position:7532453:1
position: 7532453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7533417-7533497:1:exon

position:7533417:1
position: 7533417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105869743
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869743
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8110986..8113977)
location: region:8110986-8113977:-1
so has part: feature:8110986-8113977:-1:exon
subclass of: SO_0000011

105869743
type: Gene
SIO_000068: ncbigene

position:8110986:-1
position: 8110986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8113977:-1
position: 8113977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8110986-8113977:-1:exon

LOC105869743
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869743
product: uncharacterized LOC105869743, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001153252.1
SIO_010081: LOC105869743
subclass of: SO_0000673
so part of: LOC105869743
location: complement(join(8110986..8111246,8111575..8111726,8113929..8113977))
location: region:8110986-8113977:-1
so has part: feature:8113929-8113977:-1:exon
so has part: feature:8111575-8111726:-1:exon
so has part: feature:8110986-8111246:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8113929-8113977:-1:exon

position:8113929:-1
position: 8113929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8111575-8111726:-1:exon

position:8111575:-1
position: 8111575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8111726:-1
position: 8111726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8110986-8111246:-1:exon

position:8111246:-1
position: 8111246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105869743
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869743
product: uncharacterized LOC105869743, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001153253.1
SIO_010081: LOC105869743
subclass of: SO_0000673
so part of: LOC105869743
location: complement(join(8110986..8111246,8111575..8111726,8113060..8113139))
location: region:8110986-8113139:-1
so has part: feature:8113060-8113139:-1:exon
so has part: feature:8111575-8111726:-1:exon
so has part: feature:8110986-8111246:-1:exon

position:8113139:-1
position: 8113139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8113060-8113139:-1:exon

position:8113060:-1
position: 8113060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8111575-8111726:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8110986-8111246:-1:exon

GSX2
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: GSX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8112405..8114165
location: region:8112405-8114165:1
so has part: feature:8112405-8114165:1:exon
subclass of: SO_0000010

105869742
type: Gene
SIO_000068: ncbigene

position:8112405:1
position: 8112405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8114165:1
position: 8114165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8112405-8114165:1:exon

GSX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GSX2
product: GS homeobox 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 4 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012761779.2
SIO_010081: GSX2
subclass of: SO_0000673
so part of: GSX2
location: join(8112405..8113122,8113789..8114165)
location: region:8112405-8114165:1
so has part: feature:8112405-8113122:1:exon
so has part: feature:8113789-8114165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8112405-8113122:1:exon

position:8113122:1
position: 8113122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8113789-8114165:1:exon

position:8113789:1
position: 8113789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GSX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GSX2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: GS homeobox 2
translation: MSRSFYVDSLIIKDSSRPAPSLPNLHPGPDFFIPLGMPSPLVMSVSGPGCPSRKSGAFCVCPLCVTSHLHSSRGPVGAGGGGAAAGGTGAGGSGAAGGAGALPLLKSQFSSGPGDAQFCPRVGHAHHHHHPAQQPGSPRRRRGAGAAAXRAALGHPQHHAPVCAATTYNVADPRRFHCLTMGGSDASQVPSGKRMRTAFTSSQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGTQRNSHAGCKCVGGQAHVARSEDEDSLSPASANDDKEISPL
SIO_010081: GSX2
subclass of: SO_0000673
so part of: GSX2
location: join(8112581..8113122,8113789..8114129)
location: region:8112581-8114129:1
so has part: feature:8112581-8113122:1:exon
so has part: feature:8113789-8114129:1:exon

XP_012617233.2
type: Protein
SIO_000068: ncbiprotein

position:8112581:1
position: 8112581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8114129:1
position: 8114129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8112581-8113122:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8113789-8114129:1:exon

CHIC2
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: CHIC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8192671..8228446
location: region:8192671-8228446:1
so has part: feature:8192671-8228446:1:exon
subclass of: SO_0000010

105869735
type: Gene
SIO_000068: ncbigene

position:8192671:1
position: 8192671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8228446:1
position: 8228446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8192671-8228446:1:exon

CHIC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CHIC2
product: cysteine rich hydrophobic domain 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 85 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012761770.2
SIO_010081: CHIC2
subclass of: SO_0000673
so part of: CHIC2
location: join(8192671..8192998,8206693..8206747,8206883..8207038,8221425..8221481,8221648..8221707,8225572..8228446)
location: region:8192671-8228446:1
so has part: feature:8192671-8192998:1:exon
so has part: feature:8206693-8206747:1:exon
so has part: feature:8206883-8207038:1:exon
so has part: feature:8221425-8221481:1:exon
so has part: feature:8221648-8221707:1:exon
so has part: feature:8225572-8228446:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8192671-8192998:1:exon

position:8192998:1
position: 8192998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8206693-8206747:1:exon

position:8206693:1
position: 8206693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8206747:1
position: 8206747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8206883-8207038:1:exon

position:8206883:1
position: 8206883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8207038:1
position: 8207038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8221425-8221481:1:exon

position:8221425:1
position: 8221425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8221481:1
position: 8221481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8221648-8221707:1:exon

position:8221648:1
position: 8221648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8221707:1
position: 8221707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8225572-8228446:1:exon

position:8225572:1
position: 8225572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHIC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CHIC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich hydrophobic domain-containing protein 2
translation: MADFDEIYEEEEDEERALEEQLLKYSPDPVVVRGSGHVTVFGLSNKFESEFPSSLTGKVAPEEFKASINRVNSCLKKNLPVNVRWLLCGCLCCCCTLGCSMWPVICLSKRTRRSIEKLLEWENNRLYHKLCLHWRLSKRKCETNNMMEYVILIEFLPKTPIFRPD
SIO_010081: CHIC2
subclass of: SO_0000673
so part of: CHIC2
location: join(8192880..8192998,8206693..8206747,8206883..8207038,8221425..8221481,8221648..8221707,8225572..8225622)
location: region:8192880-8225622:1
so has part: feature:8192880-8192998:1:exon
so has part: feature:8206693-8206747:1:exon
so has part: feature:8206883-8207038:1:exon
so has part: feature:8221425-8221481:1:exon
so has part: feature:8221648-8221707:1:exon
so has part: feature:8225572-8225622:1:exon

XP_012617224.1
type: Protein
SIO_000068: ncbiprotein

position:8192880:1
position: 8192880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8225622:1
position: 8225622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8192880-8192998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8206693-8206747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8206883-8207038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8221425-8221481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8221648-8221707:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8225572-8225622:1:exon

LOC105869744
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869744
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8354585..8359311
location: region:8354585-8359311:1
so has part: feature:8354585-8359311:1:exon
subclass of: SO_0000011

105869744
type: Gene
SIO_000068: ncbigene

position:8354585:1
position: 8354585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8359311:1
position: 8359311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8354585-8359311:1:exon

LOC105869744
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869744
product: uncharacterized LOC105869744
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001153254.1
SIO_010081: LOC105869744
subclass of: SO_0000673
so part of: LOC105869744
location: join(8354585..8354673,8355892..8355963,8358711..8359311)
location: region:8354585-8359311:1
so has part: feature:8354585-8354673:1:exon
so has part: feature:8355892-8355963:1:exon
so has part: feature:8358711-8359311:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8354585-8354673:1:exon

position:8354673:1
position: 8354673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8355892-8355963:1:exon

position:8355892:1
position: 8355892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8355963:1
position: 8355963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8358711-8359311:1:exon

position:8358711:1
position: 8358711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105869745
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8401785..8421178)
location: region:8401785-8421178:-1
so has part: feature:8401785-8421178:-1:exon
subclass of: SO_0000011

105869745
type: Gene
SIO_000068: ncbigene

position:8401785:-1
position: 8401785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8421178:-1
position: 8421178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8401785-8421178:-1:exon

LOC105869745
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869745
product: uncharacterized LOC105869745
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001153255.2
SIO_010081: LOC105869745
subclass of: SO_0000673
so part of: LOC105869745
location: complement(join(8401785..8401934,8418333..8418617,8420432..8421178))
location: region:8401785-8421178:-1
so has part: feature:8420432-8421178:-1:exon
so has part: feature:8418333-8418617:-1:exon
so has part: feature:8401785-8401934:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8420432-8421178:-1:exon

position:8420432:-1
position: 8420432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8418333-8418617:-1:exon

position:8418333:-1
position: 8418333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8418617:-1
position: 8418617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8401785-8401934:-1:exon

position:8401934:-1
position: 8401934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LNX1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LNX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8650455..8737838
location: region:8650455-8737838:1
so has part: feature:8650455-8737838:1:exon
subclass of: SO_0000010

105869739
type: Gene
SIO_000068: ncbigene

position:8650455:1
position: 8650455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8737838:1
position: 8737838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8650455-8737838:1:exon

LNX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LNX1
product: ligand of numb-protein X 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 1 Protein, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284623.1
SIO_010081: LNX1
subclass of: SO_0000673
so part of: LNX1
location: join(8650455..8651221,8695949..8696058,8701831..8701956,8702476..8702629,8705741..8705977,8722630..8722763,8726208..8726385,8727990..8728218,8736757..8736915,8737271..8737838)
location: region:8650455-8737838:1
so has part: feature:8650455-8651221:1:exon
so has part: feature:8695949-8696058:1:exon
so has part: feature:8701831-8701956:1:exon
so has part: feature:8702476-8702629:1:exon
so has part: feature:8705741-8705977:1:exon
so has part: feature:8722630-8722763:1:exon
so has part: feature:8726208-8726385:1:exon
so has part: feature:8727990-8728218:1:exon
so has part: feature:8736757-8736915:1:exon
so has part: feature:8737271-8737838:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8650455-8651221:1:exon

position:8651221:1
position: 8651221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8695949-8696058:1:exon

position:8695949:1
position: 8695949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8696058:1
position: 8696058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8701831-8701956:1:exon

position:8701831:1
position: 8701831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8701956:1
position: 8701956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8702476-8702629:1:exon

position:8702476:1
position: 8702476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8702629:1
position: 8702629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8705741-8705977:1:exon

position:8705741:1
position: 8705741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8705977:1
position: 8705977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8722630-8722763:1:exon

position:8722630:1
position: 8722630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8722763:1
position: 8722763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8726208-8726385:1:exon

position:8726208:1
position: 8726208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8726385:1
position: 8726385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8727990-8728218:1:exon

position:8727990:1
position: 8727990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8728218:1
position: 8728218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8736757-8736915:1:exon

position:8736757:1
position: 8736757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8736915:1
position: 8736915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8737271-8737838:1:exon

position:8737271:1
position: 8737271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LNX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LNX1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase LNX
translation: MKALLLLILPWLSPANYIDNVGNLYFLYSELCKVASHYGLTEDRKXRPGDGCGDGHVSLTATALSPETSAAATISLMTDEPGLDNPATCHGXGQPAAHCLNDSGRSSRARARPFERSSVRSRSFKKINRALSVLRRTKSGSAVANQADQNRENSHNPATPEAFPRLYHLIPDGEITSIRIRRVDPNESLSIRLVGGSETPLVHIIIQHIYRDGAVARDGRLLPGDVILKVDATAVWLGRGSQRETRPSVVSRQVRQQSPDVLEELGWDGSGGQCPGPVPGSSTPKPLRPAVGCREKVVSVRKEPDESLGMTVSGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVNGVELTEVSRSEAVALLKSTSSSVVLKALEVTEREPQADCGSPATLDSNHNVTPPSDWSPSWVMWLELPRYLYNCKDVILRRNTAGSLGFCIVGGYEEYNGDQPFFIKSIVEGTPAYNDGRIRCGDILLAVNGRSTSGMIHASLARMLKELKGRITLTIVSWPGTFL
SIO_010081: LNX1
subclass of: SO_0000673
so part of: LNX1
location: join(8651130..8651221,8695949..8696058,8701831..8701956,8702476..8702629,8705741..8705977,8722630..8722763,8726208..8726385,8727990..8728218,8736757..8736915,8737271..8737406)
location: region:8651130-8737406:1
so has part: feature:8651130-8651221:1:exon
so has part: feature:8695949-8696058:1:exon
so has part: feature:8701831-8701956:1:exon
so has part: feature:8702476-8702629:1:exon
so has part: feature:8705741-8705977:1:exon
so has part: feature:8722630-8722763:1:exon
so has part: feature:8726208-8726385:1:exon
so has part: feature:8727990-8728218:1:exon
so has part: feature:8736757-8736915:1:exon
so has part: feature:8737271-8737406:1:exon

XP_020140212.1
type: Protein
SIO_000068: ncbiprotein

position:8651130:1
position: 8651130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8737406:1
position: 8737406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8651130-8651221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8695949-8696058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8701831-8701956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8702476-8702629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8705741-8705977:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8722630-8722763:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8726208-8726385:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8727990-8728218:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8736757-8736915:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8737271-8737406:1:exon

FIP1L1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: FIP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8738600..8824868)
location: region:8738600-8824868:-1
so has part: feature:8738600-8824868:-1:exon
subclass of: SO_0000010

105869736
type: Gene
SIO_000068: ncbigene

position:8738600:-1
position: 8738600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8824868:-1
position: 8824868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8738600-8824868:-1:exon

FIP1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FIP1L1
product: factor interacting with PAPOLA and CPSF1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 159 ESTs, 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012761773.2
SIO_010081: FIP1L1
subclass of: SO_0000673
so part of: FIP1L1
location: complement(join(8738600..8738918,8739912..8740049,8740785..8740833,8740866..8740909,8746208..8746331,8761051..8761059,8765384..8765439,8766787..8766841,8780205..8780361,8783894..8783987,8803140..8803249,8810511..8810641,8811070..8811177,8811540..8811604,8816788..8816891,8818150..8818207,8823015..8823054,8824364..8824868))
location: region:8738600-8824868:-1
so has part: feature:8824364-8824868:-1:exon
so has part: feature:8823015-8823054:-1:exon
so has part: feature:8818150-8818207:-1:exon
so has part: feature:8816788-8816891:-1:exon
so has part: feature:8811540-8811604:-1:exon
so has part: feature:8811070-8811177:-1:exon
so has part: feature:8810511-8810641:-1:exon
so has part: feature:8803140-8803249:-1:exon
so has part: feature:8783894-8783987:-1:exon
so has part: feature:8780205-8780361:-1:exon
so has part: feature:8766787-8766841:-1:exon
so has part: feature:8765384-8765439:-1:exon
so has part: feature:8761051-8761059:-1:exon
so has part: feature:8746208-8746331:-1:exon
so has part: feature:8740866-8740909:-1:exon
so has part: feature:8740785-8740833:-1:exon
so has part: feature:8739912-8740049:-1:exon
so has part: feature:8738600-8738918:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8824364-8824868:-1:exon

position:8824364:-1
position: 8824364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8823015-8823054:-1:exon

position:8823015:-1
position: 8823015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8823054:-1
position: 8823054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8818150-8818207:-1:exon

position:8818150:-1
position: 8818150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8818207:-1
position: 8818207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8816788-8816891:-1:exon

position:8816788:-1
position: 8816788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8816891:-1
position: 8816891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8811540-8811604:-1:exon

position:8811540:-1
position: 8811540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8811604:-1
position: 8811604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8811070-8811177:-1:exon

position:8811070:-1
position: 8811070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8811177:-1
position: 8811177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8810511-8810641:-1:exon

position:8810511:-1
position: 8810511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8810641:-1
position: 8810641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8803140-8803249:-1:exon

position:8803140:-1
position: 8803140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8803249:-1
position: 8803249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8783894-8783987:-1:exon

position:8783894:-1
position: 8783894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8783987:-1
position: 8783987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8780205-8780361:-1:exon

position:8780205:-1
position: 8780205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8780361:-1
position: 8780361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8766787-8766841:-1:exon

position:8766787:-1
position: 8766787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8766841:-1
position: 8766841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8765384-8765439:-1:exon

position:8765384:-1
position: 8765384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8765439:-1
position: 8765439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8761051-8761059:-1:exon

position:8761051:-1
position: 8761051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8761059:-1
position: 8761059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8746208-8746331:-1:exon

position:8746208:-1
position: 8746208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8746331:-1
position: 8746331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8740866-8740909:-1:exon

position:8740866:-1
position: 8740866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8740909:-1
position: 8740909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8740785-8740833:-1:exon

position:8740785:-1
position: 8740785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8740833:-1
position: 8740833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8739912-8740049:-1:exon

position:8739912:-1
position: 8739912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8740049:-1
position: 8740049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8738600-8738918:-1:exon

position:8738918:-1
position: 8738918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FIP1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FIP1L1
product: factor interacting with PAPOLA and CPSF1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 163 ESTs, 4 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012761772.2
SIO_010081: FIP1L1
subclass of: SO_0000673
so part of: FIP1L1
location: complement(join(8738600..8738918,8739912..8740049,8740785..8740833,8740866..8740909,8746208..8746331,8761051..8761059,8765384..8765439,8766787..8766841,8768891..8768917,8780205..8780361,8783894..8783987,8793821..8793928,8803140..8803249,8810148..8810216,8810511..8810641,8811070..8811177,8811540..8811604,8816788..8816891,8818150..8818207,8823015..8823054,8824364..8824867))
location: region:8738600-8824867:-1
so has part: feature:8824364-8824867:-1:exon
so has part: feature:8823015-8823054:-1:exon
so has part: feature:8818150-8818207:-1:exon
so has part: feature:8816788-8816891:-1:exon
so has part: feature:8811540-8811604:-1:exon
so has part: feature:8811070-8811177:-1:exon
so has part: feature:8810511-8810641:-1:exon
so has part: feature:8810148-8810216:-1:exon
so has part: feature:8803140-8803249:-1:exon
so has part: feature:8793821-8793928:-1:exon
so has part: feature:8783894-8783987:-1:exon
so has part: feature:8780205-8780361:-1:exon
so has part: feature:8768891-8768917:-1:exon
so has part: feature:8766787-8766841:-1:exon
so has part: feature:8765384-8765439:-1:exon
so has part: feature:8761051-8761059:-1:exon
so has part: feature:8746208-8746331:-1:exon
so has part: feature:8740866-8740909:-1:exon
so has part: feature:8740785-8740833:-1:exon
so has part: feature:8739912-8740049:-1:exon
so has part: feature:8738600-8738918:-1:exon

position:8824867:-1
position: 8824867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8824364-8824867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8823015-8823054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8818150-8818207:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8816788-8816891:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8811540-8811604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8811070-8811177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8810511-8810641:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8810148-8810216:-1:exon

position:8810148:-1
position: 8810148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8810216:-1
position: 8810216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8803140-8803249:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8793821-8793928:-1:exon

position:8793821:-1
position: 8793821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8793928:-1
position: 8793928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8783894-8783987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8780205-8780361:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8768891-8768917:-1:exon

position:8768891:-1
position: 8768891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8768917:-1
position: 8768917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8766787-8766841:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8765384-8765439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8761051-8761059:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8746208-8746331:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8740866-8740909:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8740785-8740833:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8739912-8740049:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8738600-8738918:-1:exon

FIP1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FIP1L1
product: factor interacting with PAPOLA and CPSF1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 178 ESTs, 4 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012761771.2
SIO_010081: FIP1L1
subclass of: SO_0000673
so part of: FIP1L1
location: complement(join(8738600..8738918,8739912..8740049,8740785..8740833,8740866..8740909,8746208..8746331,8761051..8761059,8765384..8765439,8766787..8766841,8780205..8780361,8783894..8783987,8793821..8793928,8803140..8803249,8810148..8810216,8810511..8810641,8811070..8811177,8811540..8811604,8816788..8816891,8818150..8818207,8823015..8823054,8823150..8823194,8824364..8824865))
location: region:8738600-8824865:-1
so has part: feature:8824364-8824865:-1:exon
so has part: feature:8823150-8823194:-1:exon
so has part: feature:8823015-8823054:-1:exon
so has part: feature:8818150-8818207:-1:exon
so has part: feature:8816788-8816891:-1:exon
so has part: feature:8811540-8811604:-1:exon
so has part: feature:8811070-8811177:-1:exon
so has part: feature:8810511-8810641:-1:exon
so has part: feature:8810148-8810216:-1:exon
so has part: feature:8803140-8803249:-1:exon
so has part: feature:8793821-8793928:-1:exon
so has part: feature:8783894-8783987:-1:exon
so has part: feature:8780205-8780361:-1:exon
so has part: feature:8766787-8766841:-1:exon
so has part: feature:8765384-8765439:-1:exon
so has part: feature:8761051-8761059:-1:exon
so has part: feature:8746208-8746331:-1:exon
so has part: feature:8740866-8740909:-1:exon
so has part: feature:8740785-8740833:-1:exon
so has part: feature:8739912-8740049:-1:exon
so has part: feature:8738600-8738918:-1:exon

position:8824865:-1
position: 8824865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8824364-8824865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8823150-8823194:-1:exon

position:8823150:-1
position: 8823150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8823194:-1
position: 8823194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8823015-8823054:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8818150-8818207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8816788-8816891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8811540-8811604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8811070-8811177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8810511-8810641:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8810148-8810216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8803140-8803249:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8793821-8793928:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8783894-8783987:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8780205-8780361:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8766787-8766841:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8765384-8765439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8761051-8761059:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8746208-8746331:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8740866-8740909:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8740785-8740833:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8739912-8740049:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8738600-8738918:-1:exon

FIP1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FIP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA 3'-end-processing factor FIP1 isoform X3
translation: MSAGEVERLVSELSGGTAGDEEEEWLYGDENEVERPEEENASANPPSGVEDETAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLNIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITVQQGRTGNSEKETALPSTKAEFTSPPSLFKTGLPPSRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFFPPGAPPTHLPPPPFLPPPPSVSTAPPLIPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYSNVAFPHLPGSAPSWPSLVDTSKQWDYYARREKDRDRERDRDTRTRSEDRDRERDRDRERDQRERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAAPAE
SIO_010081: FIP1L1
subclass of: SO_0000673
so part of: FIP1L1
location: complement(join(8738771..8738918,8739912..8740049,8740785..8740833,8740866..8740909,8746208..8746331,8761051..8761059,8765384..8765439,8766787..8766841,8780205..8780361,8783894..8783987,8803140..8803249,8810511..8810641,8811070..8811177,8811540..8811604,8816788..8816891,8818150..8818207,8823015..8823054,8824364..8824448))
location: region:8738771-8824448:-1
so has part: feature:8824364-8824448:-1:exon
so has part: feature:8823015-8823054:-1:exon
so has part: feature:8818150-8818207:-1:exon
so has part: feature:8816788-8816891:-1:exon
so has part: feature:8811540-8811604:-1:exon
so has part: feature:8811070-8811177:-1:exon
so has part: feature:8810511-8810641:-1:exon
so has part: feature:8803140-8803249:-1:exon
so has part: feature:8783894-8783987:-1:exon
so has part: feature:8780205-8780361:-1:exon
so has part: feature:8766787-8766841:-1:exon
so has part: feature:8765384-8765439:-1:exon
so has part: feature:8761051-8761059:-1:exon
so has part: feature:8746208-8746331:-1:exon
so has part: feature:8740866-8740909:-1:exon
so has part: feature:8740785-8740833:-1:exon
so has part: feature:8739912-8740049:-1:exon
so has part: feature:8738771-8738918:-1:exon

XP_012617227.1
type: Protein
SIO_000068: ncbiprotein

position:8738771:-1
position: 8738771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8824448:-1
position: 8824448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8824364-8824448:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8823015-8823054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8818150-8818207:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8816788-8816891:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8811540-8811604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8811070-8811177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8810511-8810641:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8803140-8803249:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8783894-8783987:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8780205-8780361:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8766787-8766841:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8765384-8765439:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8761051-8761059:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8746208-8746331:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8740866-8740909:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8740785-8740833:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8739912-8740049:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8738771-8738918:-1:exon

FIP1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FIP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA 3'-end-processing factor FIP1 isoform X2
translation: MSAGEVERLVSELSGGTAGDEEEEWLYGDENEVERPEEENASANPPSGVEDETAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLNIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGRTGNSEKETALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKANSSVGKWQDRYGRAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFFPPGAPPTHLPPPPFLPPPPSVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYSNVAFPHLPGSAPSWPSLVDTSKQWDYYARREKDRDRERDRDTRTRSEDRDRERDRDRERDQRERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAAPAE
SIO_010081: FIP1L1
subclass of: SO_0000673
so part of: FIP1L1
location: complement(join(8738771..8738918,8739912..8740049,8740785..8740833,8740866..8740909,8746208..8746331,8761051..8761059,8765384..8765439,8766787..8766841,8768891..8768917,8780205..8780361,8783894..8783987,8793821..8793928,8803140..8803249,8810148..8810216,8810511..8810641,8811070..8811177,8811540..8811604,8816788..8816891,8818150..8818207,8823015..8823054,8824364..8824448))
location: region:8738771-8824448:-1
so has part: feature:8824364-8824448:-1:exon
so has part: feature:8823015-8823054:-1:exon
so has part: feature:8818150-8818207:-1:exon
so has part: feature:8816788-8816891:-1:exon
so has part: feature:8811540-8811604:-1:exon
so has part: feature:8811070-8811177:-1:exon
so has part: feature:8810511-8810641:-1:exon
so has part: feature:8810148-8810216:-1:exon
so has part: feature:8803140-8803249:-1:exon
so has part: feature:8793821-8793928:-1:exon
so has part: feature:8783894-8783987:-1:exon
so has part: feature:8780205-8780361:-1:exon
so has part: feature:8768891-8768917:-1:exon
so has part: feature:8766787-8766841:-1:exon
so has part: feature:8765384-8765439:-1:exon
so has part: feature:8761051-8761059:-1:exon
so has part: feature:8746208-8746331:-1:exon
so has part: feature:8740866-8740909:-1:exon
so has part: feature:8740785-8740833:-1:exon
so has part: feature:8739912-8740049:-1:exon
so has part: feature:8738771-8738918:-1:exon

XP_012617226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8824364-8824448:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8823015-8823054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8818150-8818207:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8816788-8816891:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8811540-8811604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8811070-8811177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8810511-8810641:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8810148-8810216:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8803140-8803249:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8793821-8793928:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8783894-8783987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8780205-8780361:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8768891-8768917:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8766787-8766841:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8765384-8765439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8761051-8761059:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8746208-8746331:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8740866-8740909:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8740785-8740833:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8739912-8740049:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8738771-8738918:-1:exon

FIP1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FIP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA 3'-end-processing factor FIP1 isoform X1
translation: MSAGEVERLVSELSGGTAGDEEEEWLYGGPWDVHVHRDLAKDLDENEVERPEEENASANPPSGVEDETAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLNIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGRTGNSEKETALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKANSSVGKWQDRYGRAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFFPPGAPPTHLPPPPFLPPPPSVSTAPPLIPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYSNVAFPHLPGSAPSWPSLVDTSKQWDYYARREKDRDRERDRDTRTRSEDRDRERDRDRERDQRERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAAPAE
SIO_010081: FIP1L1
subclass of: SO_0000673
so part of: FIP1L1
location: complement(join(8738771..8738918,8739912..8740049,8740785..8740833,8740866..8740909,8746208..8746331,8761051..8761059,8765384..8765439,8766787..8766841,8780205..8780361,8783894..8783987,8793821..8793928,8803140..8803249,8810148..8810216,8810511..8810641,8811070..8811177,8811540..8811604,8816788..8816891,8818150..8818207,8823015..8823054,8823150..8823194,8824364..8824448))
location: region:8738771-8824448:-1
so has part: feature:8824364-8824448:-1:exon
so has part: feature:8823150-8823194:-1:exon
so has part: feature:8823015-8823054:-1:exon
so has part: feature:8818150-8818207:-1:exon
so has part: feature:8816788-8816891:-1:exon
so has part: feature:8811540-8811604:-1:exon
so has part: feature:8811070-8811177:-1:exon
so has part: feature:8810511-8810641:-1:exon
so has part: feature:8810148-8810216:-1:exon
so has part: feature:8803140-8803249:-1:exon
so has part: feature:8793821-8793928:-1:exon
so has part: feature:8783894-8783987:-1:exon
so has part: feature:8780205-8780361:-1:exon
so has part: feature:8766787-8766841:-1:exon
so has part: feature:8765384-8765439:-1:exon
so has part: feature:8761051-8761059:-1:exon
so has part: feature:8746208-8746331:-1:exon
so has part: feature:8740866-8740909:-1:exon
so has part: feature:8740785-8740833:-1:exon
so has part: feature:8739912-8740049:-1:exon
so has part: feature:8738771-8738918:-1:exon

XP_012617225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8824364-8824448:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8823150-8823194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8823015-8823054:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8818150-8818207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8816788-8816891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8811540-8811604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8811070-8811177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8810511-8810641:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8810148-8810216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8803140-8803249:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8793821-8793928:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8783894-8783987:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8780205-8780361:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8766787-8766841:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8765384-8765439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8761051-8761059:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8746208-8746331:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8740866-8740909:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8740785-8740833:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8739912-8740049:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8738771-8738918:-1:exon

SCFD2
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: SCFD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8836925..9214939
location: region:8836925-9214939:1
so has part: feature:8836925-9214939:1:exon
subclass of: SO_0000010

105869740
type: Gene
SIO_000068: ncbigene

position:8836925:1
position: 8836925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9214939:1
position: 9214939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8836925-9214939:1:exon

SCFD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SCFD2
product: sec1 family domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 118 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284617.1
SIO_010081: SCFD2
subclass of: SO_0000673
so part of: SCFD2
location: join(8836925..8837910,8840905..8841073,8862177..8862304,8874279..8874454,8947325..8947574,9153285..9153430,9177742..9177876,9191079..9191198,9214787..9214939)
location: region:8836925-9214939:1
so has part: feature:8836925-8837910:1:exon
so has part: feature:8840905-8841073:1:exon
so has part: feature:8862177-8862304:1:exon
so has part: feature:8874279-8874454:1:exon
so has part: feature:8947325-8947574:1:exon
so has part: feature:9153285-9153430:1:exon
so has part: feature:9177742-9177876:1:exon
so has part: feature:9191079-9191198:1:exon
so has part: feature:9214787-9214939:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8836925-8837910:1:exon

position:8837910:1
position: 8837910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8840905-8841073:1:exon

position:8840905:1
position: 8840905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8841073:1
position: 8841073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8862177-8862304:1:exon

position:8862177:1
position: 8862177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8862304:1
position: 8862304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8874279-8874454:1:exon

position:8874279:1
position: 8874279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8874454:1
position: 8874454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8947325-8947574:1:exon

position:8947325:1
position: 8947325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8947574:1
position: 8947574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9153285-9153430:1:exon

position:9153285:1
position: 9153285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9153430:1
position: 9153430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9177742-9177876:1:exon

position:9177742:1
position: 9177742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9177876:1
position: 9177876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9191079-9191198:1:exon

position:9191079:1
position: 9191079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9191198:1
position: 9191198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9214787-9214939:1:exon

position:9214787:1
position: 9214787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCFD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SCFD2
product: sec1 family domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 118 ESTs, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284618.1
SIO_010081: SCFD2
subclass of: SO_0000673
so part of: SCFD2
location: join(8836925..8837910,8840905..8841073,8862177..8862304,8874279..8874454,8947325..8947574,9153285..9153430,9177742..9177876,9191079..9191198,9201206..9201466)
location: region:8836925-9201466:1
so has part: feature:8836925-8837910:1:exon
so has part: feature:8840905-8841073:1:exon
so has part: feature:8862177-8862304:1:exon
so has part: feature:8874279-8874454:1:exon
so has part: feature:8947325-8947574:1:exon
so has part: feature:9153285-9153430:1:exon
so has part: feature:9177742-9177876:1:exon
so has part: feature:9191079-9191198:1:exon
so has part: feature:9201206-9201466:1:exon

position:9201466:1
position: 9201466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8836925-8837910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8840905-8841073:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8862177-8862304:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8874279-8874454:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8947325-8947574:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9153285-9153430:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9177742-9177876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9191079-9191198:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9201206-9201466:1:exon

position:9201206:1
position: 9201206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCFD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SCFD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sec1 family domain-containing protein 2 isoform X1
translation: MSAPGVLSFTQQGWEQVLAKVKRSVVYLDAACAESLHWGCGSARLLEAVGVPACHLREFEPDAPGGGAGQPKAAFVLSGLLKGRTVETLRDIIRRSHFQYCVVVTAVGHAVHLTANHVPAAAAAELEGQHPVFEQLEEKLCEWMGNMNYTAEVLHVPLLLAPAAPHLALTPAFASLFPLLPQDVHLLNSARPDKRRLGSLGEVDAAALTPELLLQIRCLVSGLSSLCEHLGVREECFAVGSLSRVIAADLANYAPAKNRRKTAAGRASVVFVDRTLDLTGAVGHHGDNLVEKIISALPQLPGHTNDVMVSMVELTALQNMEENHSVVAPGCLAQANDPSAKTLWEALLNSKHKEAVMEVRRHLVETASREQLPIKMSMGRVTAGQLTSYIQLFRNNLEALMNHCGLLQLGLATAQTLKHPQSAKWDNFLAFERLLLQSLGESAMAVVLNQLLPMIKPSNQRTQDDYSPEELLVLLVYIYSVTGEPPVDKELGEAEEKVKKALAQVFCEESELSPLLQKITGCDSSINLTFQKSKIATDELFASLRDIAGARNLMKQFKSVYVPGNHTHQASYKPLLKQIVEEIFNPEKPDPVDIEHMSSGLTDLLKTGFSMFMKVSRPLPSDHPLLILFVVGGVTVSEAKMVKDLVASLKPGTQHKKLREQESNSTAMWVPLLPSISKHLTWIPGVS
SIO_010081: SCFD2
subclass of: SO_0000673
so part of: SCFD2
location: join(8837073..8837910,8840905..8841073,8862177..8862304,8874279..8874454,8947325..8947574,9153285..9153430,9177742..9177876,9191079..9191198,9214787..9214888)
location: region:8837073-9214888:1
so has part: feature:8837073-8837910:1:exon
so has part: feature:8840905-8841073:1:exon
so has part: feature:8862177-8862304:1:exon
so has part: feature:8874279-8874454:1:exon
so has part: feature:8947325-8947574:1:exon
so has part: feature:9153285-9153430:1:exon
so has part: feature:9177742-9177876:1:exon
so has part: feature:9191079-9191198:1:exon
so has part: feature:9214787-9214888:1:exon

XP_020140206.1
type: Protein
SIO_000068: ncbiprotein

position:8837073:1
position: 8837073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9214888:1
position: 9214888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8837073-8837910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8840905-8841073:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8862177-8862304:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8874279-8874454:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8947325-8947574:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9153285-9153430:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9177742-9177876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9191079-9191198:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9214787-9214888:1:exon

SCFD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SCFD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sec1 family domain-containing protein 2 isoform X2
translation: MSAPGVLSFTQQGWEQVLAKVKRSVVYLDAACAESLHWGCGSARLLEAVGVPACHLREFEPDAPGGGAGQPKAAFVLSGLLKGRTVETLRDIIRRSHFQYCVVVTAVGHAVHLTANHVPAAAAAELEGQHPVFEQLEEKLCEWMGNMNYTAEVLHVPLLLAPAAPHLALTPAFASLFPLLPQDVHLLNSARPDKRRLGSLGEVDAAALTPELLLQIRCLVSGLSSLCEHLGVREECFAVGSLSRVIAADLANYAPAKNRRKTAAGRASVVFVDRTLDLTGAVGHHGDNLVEKIISALPQLPGHTNDVMVSMVELTALQNMEENHSVVAPGCLAQANDPSAKTLWEALLNSKHKEAVMEVRRHLVETASREQLPIKMSMGRVTAGQLTSYIQLFRNNLEALMNHCGLLQLGLATAQTLKHPQSAKWDNFLAFERLLLQSLGESAMAVVLNQLLPMIKPSNQRTQDDYSPEELLVLLVYIYSVTGEPPVDKELGEAEEKVKKALAQVFCEESELSPLLQKITGCDSSINLTFQKSKIATDELFASLRDIAGARNLMKQFKSVYVPGNHTHQASYKPLLKQIVEEIFNPEKPDPVDIEHMSSGLTDLLKTGFSMFMKVSRPLPSDHPLLILFVVGGVTVSEAKMVKDLVASLKPGTQVMAACPRRLPGKPLNIPELLFATDRLHPDLGI
SIO_010081: SCFD2
subclass of: SO_0000673
so part of: SCFD2
location: join(8837073..8837910,8840905..8841073,8862177..8862304,8874279..8874454,8947325..8947574,9153285..9153430,9177742..9177876,9191079..9191198,9201206..9201304)
location: region:8837073-9201304:1
so has part: feature:8837073-8837910:1:exon
so has part: feature:8840905-8841073:1:exon
so has part: feature:8862177-8862304:1:exon
so has part: feature:8874279-8874454:1:exon
so has part: feature:8947325-8947574:1:exon
so has part: feature:9153285-9153430:1:exon
so has part: feature:9177742-9177876:1:exon
so has part: feature:9191079-9191198:1:exon
so has part: feature:9201206-9201304:1:exon

XP_020140207.1
type: Protein
SIO_000068: ncbiprotein

position:9201304:1
position: 9201304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8837073-8837910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8840905-8841073:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8862177-8862304:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8874279-8874454:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8947325-8947574:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9153285-9153430:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9177742-9177876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9191079-9191198:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9201206-9201304:1:exon

RASL11B
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: RASL11B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9213039..9216853)
location: region:9213039-9216853:-1
so has part: feature:9213039-9216853:-1:exon
subclass of: SO_0000010

105869741
type: Gene
SIO_000068: ncbigene

position:9213039:-1
position: 9213039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9216853:-1
position: 9216853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9213039-9216853:-1:exon

RASL11B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RASL11B
product: RAS like family 11 member B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_020284619.1
SIO_010081: RASL11B
subclass of: SO_0000673
so part of: RASL11B
location: complement(join(9213039..9214071,9214867..9214943,9216078..9216134,9216622..9216853))
location: region:9213039-9216853:-1
so has part: feature:9216622-9216853:-1:exon
so has part: feature:9216078-9216134:-1:exon
so has part: feature:9214867-9214943:-1:exon
so has part: feature:9213039-9214071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9216622-9216853:-1:exon

position:9216622:-1
position: 9216622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9216078-9216134:-1:exon

position:9216078:-1
position: 9216078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9216134:-1
position: 9216134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9214867-9214943:-1:exon

position:9214867:-1
position: 9214867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9214943:-1
position: 9214943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9213039-9214071:-1:exon

position:9214071:-1
position: 9214071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RASL11B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RASL11B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-like protein family member 11B
translation: MRLIQNMCTIAEYPAPGSAAAAECWPGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLAIQVQDTPGIQVHENGLGCSEQLNRCIRWADAVVMVFSITDHQSYELIGQLHQHVQQLHPGTRLPVVVVANKADLLHVKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSGTPEKRRSSLIPRPKSPNMQDLKRRFKQALSAKVRTVTSV
SIO_010081: RASL11B
subclass of: SO_0000673
so part of: RASL11B
location: complement(join(9213601..9214071,9214867..9214943,9216078..9216134,9216622..9216763))
location: region:9213601-9216763:-1
so has part: feature:9216622-9216763:-1:exon
so has part: feature:9216078-9216134:-1:exon
so has part: feature:9214867-9214943:-1:exon
so has part: feature:9213601-9214071:-1:exon

XP_020140208.1
type: Protein
SIO_000068: ncbiprotein

position:9213601:-1
position: 9213601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9216763:-1
position: 9216763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9216622-9216763:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9216078-9216134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9214867-9214943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9213601-9214071:-1:exon

LOC105869737
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869737
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9226982..9234537)
location: region:9226982-9234537:-1
so has part: feature:9226982-9234537:-1:exon
subclass of: SO_0000011

105869737
type: Gene
SIO_000068: ncbigene

position:9226982:-1
position: 9226982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9234537:-1
position: 9234537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9226982-9234537:-1:exon

LOC105869737
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869737
product: uncharacterized LOC105869737
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001153251.2
SIO_010081: LOC105869737
subclass of: SO_0000673
so part of: LOC105869737
location: complement(join(9226982..9227765,9230218..9230750,9233439..9234537))
location: region:9226982-9234537:-1
so has part: feature:9233439-9234537:-1:exon
so has part: feature:9230218-9230750:-1:exon
so has part: feature:9226982-9227765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9233439-9234537:-1:exon

position:9233439:-1
position: 9233439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9230218-9230750:-1:exon

position:9230218:-1
position: 9230218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9230750:-1
position: 9230750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9226982-9227765:-1:exon

position:9227765:-1
position: 9227765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109730165
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9255281..9264874)
location: region:9255281-9264874:-1
so has part: feature:9255281-9264874:-1:exon
subclass of: SO_0000011

109730165
type: Gene
SIO_000068: ncbigene

position:9255281:-1
position: 9255281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9264874:-1
position: 9264874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9255281-9264874:-1:exon

LOC109730165
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC109730165
product: uncharacterized LOC109730165
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002222891.1
SIO_010081: LOC109730165
subclass of: SO_0000673
so part of: LOC109730165
location: complement(join(9255281..9255572,9264789..9264874))
location: region:9255281-9264874:-1
so has part: feature:9264789-9264874:-1:exon
so has part: feature:9255281-9255572:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9264789-9264874:-1:exon

position:9264789:-1
position: 9264789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9255281-9255572:-1:exon

position:9255572:-1
position: 9255572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPATA18
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: SPATA18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9578469..9610067)
location: region:9578469-9610067:-1
so has part: feature:9578469-9610067:-1:exon
subclass of: SO_0000010

105873649
type: Gene
SIO_000068: ncbigene

position:9578469:-1
position: 9578469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9610067:-1
position: 9610067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9578469-9610067:-1:exon

SPATA18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SPATA18
product: spermatogenesis associated 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012768761.2
SIO_010081: SPATA18
subclass of: SO_0000673
so part of: SPATA18
location: complement(join(9578469..9578647,9578944..9578989,9579628..9579643,9582020..9582103,9584289..9584412,9586984..9587159,9587992..9588150,9589897..9590194,9592321..9592569,9594574..9594669,9600499..9600611,9601912..9602027,9602161..9602266,9609742..9610067))
location: region:9578469-9610067:-1
so has part: feature:9609742-9610067:-1:exon
so has part: feature:9602161-9602266:-1:exon
so has part: feature:9601912-9602027:-1:exon
so has part: feature:9600499-9600611:-1:exon
so has part: feature:9594574-9594669:-1:exon
so has part: feature:9592321-9592569:-1:exon
so has part: feature:9589897-9590194:-1:exon
so has part: feature:9587992-9588150:-1:exon
so has part: feature:9586984-9587159:-1:exon
so has part: feature:9584289-9584412:-1:exon
so has part: feature:9582020-9582103:-1:exon
so has part: feature:9579628-9579643:-1:exon
so has part: feature:9578944-9578989:-1:exon
so has part: feature:9578469-9578647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9609742-9610067:-1:exon

position:9609742:-1
position: 9609742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9602161-9602266:-1:exon

position:9602161:-1
position: 9602161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9602266:-1
position: 9602266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9601912-9602027:-1:exon

position:9601912:-1
position: 9601912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9602027:-1
position: 9602027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9600499-9600611:-1:exon

position:9600499:-1
position: 9600499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9600611:-1
position: 9600611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9594574-9594669:-1:exon

position:9594574:-1
position: 9594574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9594669:-1
position: 9594669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9592321-9592569:-1:exon

position:9592321:-1
position: 9592321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9592569:-1
position: 9592569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9589897-9590194:-1:exon

position:9589897:-1
position: 9589897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9590194:-1
position: 9590194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9587992-9588150:-1:exon

position:9587992:-1
position: 9587992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9588150:-1
position: 9588150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9586984-9587159:-1:exon

position:9586984:-1
position: 9586984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9587159:-1
position: 9587159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9584289-9584412:-1:exon

position:9584289:-1
position: 9584289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9584412:-1
position: 9584412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9582020-9582103:-1:exon

position:9582020:-1
position: 9582020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9582103:-1
position: 9582103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9579628-9579643:-1:exon

position:9579628:-1
position: 9579628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9579643:-1
position: 9579643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9578944-9578989:-1:exon

position:9578944:-1
position: 9578944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9578989:-1
position: 9578989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9578469-9578647:-1:exon

position:9578647:-1
position: 9578647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPATA18
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: SPATA18
product: spermatogenesis associated 18, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001155152.2
SIO_010081: SPATA18
so part of: SPATA18
location: complement(join(9578469..9578647,9578944..9578989,9582020..9582103,9584239..9584412,9586984..9587159,9587992..9588150,9589897..9590194,9592321..9592569,9594574..9594669,9600499..9600611,9601912..9602027,9602161..9602266,9609742..9610067))
location: region:9578469-9610067:-1
so has part: feature:9609742-9610067:-1:exon
so has part: feature:9602161-9602266:-1:exon
so has part: feature:9601912-9602027:-1:exon
so has part: feature:9600499-9600611:-1:exon
so has part: feature:9594574-9594669:-1:exon
so has part: feature:9592321-9592569:-1:exon
so has part: feature:9589897-9590194:-1:exon
so has part: feature:9587992-9588150:-1:exon
so has part: feature:9586984-9587159:-1:exon
so has part: feature:9584239-9584412:-1:exon
so has part: feature:9582020-9582103:-1:exon
so has part: feature:9578944-9578989:-1:exon
so has part: feature:9578469-9578647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9609742-9610067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9602161-9602266:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9601912-9602027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9600499-9600611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9594574-9594669:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9592321-9592569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9589897-9590194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9587992-9588150:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9586984-9587159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9584239-9584412:-1:exon

position:9584239:-1
position: 9584239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9582020-9582103:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9578944-9578989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9578469-9578647:-1:exon

SPATA18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SPATA18
product: spermatogenesis associated 18, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012768762.2
SIO_010081: SPATA18
subclass of: SO_0000673
so part of: SPATA18
location: complement(join(9578469..9578647,9578944..9578989,9582020..9582103,9584289..9584412,9586984..9587159,9587992..9588150,9589897..9590194,9592321..9592569,9600499..9600611,9601912..9602027,9602161..9602266,9609742..9610066))
location: region:9578469-9610066:-1
so has part: feature:9609742-9610066:-1:exon
so has part: feature:9602161-9602266:-1:exon
so has part: feature:9601912-9602027:-1:exon
so has part: feature:9600499-9600611:-1:exon
so has part: feature:9592321-9592569:-1:exon
so has part: feature:9589897-9590194:-1:exon
so has part: feature:9587992-9588150:-1:exon
so has part: feature:9586984-9587159:-1:exon
so has part: feature:9584289-9584412:-1:exon
so has part: feature:9582020-9582103:-1:exon
so has part: feature:9578944-9578989:-1:exon
so has part: feature:9578469-9578647:-1:exon

position:9610066:-1
position: 9610066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9609742-9610066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9602161-9602266:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9601912-9602027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9600499-9600611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9592321-9592569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9589897-9590194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9587992-9588150:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9586984-9587159:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9584289-9584412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9582020-9582103:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9578944-9578989:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9578469-9578647:-1:exon

SPATA18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SPATA18
product: spermatogenesis associated 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012768760.2
SIO_010081: SPATA18
subclass of: SO_0000673
so part of: SPATA18
location: complement(join(9578469..9578647,9578944..9578989,9582020..9582103,9584289..9584412,9586984..9587159,9587992..9588150,9589897..9590194,9592321..9592569,9594574..9594669,9600499..9600611,9601912..9602027,9602161..9602266,9609742..9610066))
location: region:9578469-9610066:-1
so has part: feature:9609742-9610066:-1:exon
so has part: feature:9602161-9602266:-1:exon
so has part: feature:9601912-9602027:-1:exon
so has part: feature:9600499-9600611:-1:exon
so has part: feature:9594574-9594669:-1:exon
so has part: feature:9592321-9592569:-1:exon
so has part: feature:9589897-9590194:-1:exon
so has part: feature:9587992-9588150:-1:exon
so has part: feature:9586984-9587159:-1:exon
so has part: feature:9584289-9584412:-1:exon
so has part: feature:9582020-9582103:-1:exon
so has part: feature:9578944-9578989:-1:exon
so has part: feature:9578469-9578647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9609742-9610066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9602161-9602266:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9601912-9602027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9600499-9600611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9594574-9594669:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9592321-9592569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9589897-9590194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9587992-9588150:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9586984-9587159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9584289-9584412:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9582020-9582103:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9578944-9578989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9578469-9578647:-1:exon

SPATA18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SPATA18
product: spermatogenesis associated 18, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284644.1
SIO_010081: SPATA18
subclass of: SO_0000673
so part of: SPATA18
location: complement(join(9578469..9578647,9578944..9578989,9582020..9582103,9584289..9584412,9586984..9587159,9587992..9588150,9589897..9590194,9592321..9592569,9600488..9600505))
location: region:9578469-9600505:-1
so has part: feature:9600488-9600505:-1:exon
so has part: feature:9592321-9592569:-1:exon
so has part: feature:9589897-9590194:-1:exon
so has part: feature:9587992-9588150:-1:exon
so has part: feature:9586984-9587159:-1:exon
so has part: feature:9584289-9584412:-1:exon
so has part: feature:9582020-9582103:-1:exon
so has part: feature:9578944-9578989:-1:exon
so has part: feature:9578469-9578647:-1:exon

position:9600505:-1
position: 9600505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9600488-9600505:-1:exon

position:9600488:-1
position: 9600488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9592321-9592569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9589897-9590194:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9587992-9588150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9586984-9587159:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9584289-9584412:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9582020-9582103:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9578944-9578989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9578469-9578647:-1:exon

SPATA18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SPATA18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondria-eating protein isoform X3
translation: MADNLRRLVSSECVRTLQEKLCCWLEEYNTNTCDQNLNICLELIEQVAKVQGQLFGILTTAAQEGGHNDGVETIKSRLLPWLENSFTAASMGKPVDSRVPSLQDTFDKERHKDSGSRDRDLQQLDSDLNSTRNQLNKVQDELKSLQSQEKARHRSSDCRDLDSRRPEPRSSPRSSPRVTTKHSSSRRSSEQRDADPSSRYESQMRNLKDEIAVLSSEKSPLQRRPSRSRSPSPDPCSHSRSHSRSHSRSRSRSRSRSGSPSTHLKIRTPSPNRSKLSNVARKAALLSRFSDAYSQARLDAQCLLRRCIDKAETVQRIIYIATVEAFHVAKMAFRHFKIRVRKSLTPSYAGSNDFENAVSDYIICHLDSYDVQSSVNDVIRAMNINPKISFPPEVDFCILSDFIREICCIAFAMQALEPPLDIAFGADGEVFNDYKYRRSYDSDFTAPLVLYHVWPALMENDCVIMKGEAVTRRGAFWSSVRSVSRCRSRSLSPICSRSRIGLSAISRSRSPSPIRCVLPRF
SIO_010081: SPATA18
subclass of: SO_0000673
so part of: SPATA18
location: complement(join(9578640..9578647,9578944..9578989,9582020..9582103,9584289..9584412,9586984..9587159,9587992..9588150,9589897..9590194,9592321..9592569,9600499..9600611,9601912..9602027,9602161..9602266,9609742..9609828))
location: region:9578640-9609828:-1
so has part: feature:9609742-9609828:-1:exon
so has part: feature:9602161-9602266:-1:exon
so has part: feature:9601912-9602027:-1:exon
so has part: feature:9600499-9600611:-1:exon
so has part: feature:9592321-9592569:-1:exon
so has part: feature:9589897-9590194:-1:exon
so has part: feature:9587992-9588150:-1:exon
so has part: feature:9586984-9587159:-1:exon
so has part: feature:9584289-9584412:-1:exon
so has part: feature:9582020-9582103:-1:exon
so has part: feature:9578944-9578989:-1:exon
so has part: feature:9578640-9578647:-1:exon

XP_012624216.1
type: Protein
SIO_000068: ncbiprotein

position:9578640:-1
position: 9578640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9609828:-1
position: 9609828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9609742-9609828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9602161-9602266:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9601912-9602027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9600499-9600611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9592321-9592569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9589897-9590194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9587992-9588150:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9586984-9587159:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9584289-9584412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9582020-9582103:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9578944-9578989:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9578640-9578647:-1:exon

SPATA18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SPATA18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondria-eating protein isoform X1
translation: MADNLRRLVSSECVRTLQEKLCCWLEEYNTNTCDQNLNICLELIEQVAKVQGQLFGILTTAAQEGGHNDGVETIKSRLLPWLENSFTAASMGKPVDSRVPSLQDTFDKERHKDSGSRDRDLQQLDSDLNSTRNQLNKVQDDLAETEKTLEETKTRSAISLLAAEEEINQLKKQLKSLQSQEKARHRSSDCRDLDSRRPEPRSSPRSSPRVTTKHSSSRRSSEQRDADPSSRYESQMRNLKDEIAVLSSEKSPLQRRPSRSRSPSPDPCSHSRSHSRSHSRSRSRSRSRSGSPSTHLKIRTPSPNRSKLSNVARKAALLSRFSDAYSQARLDAQCLLRRCIDKAETVQRIIYIATVEAFHVAKMAFRHFKIRVRKSLTPSYAGSNDFENAVSDYIICHLDSYDVQSSVNDVIRAMNINPKISFPPEVDFCILSDFIREICCIAFAMQALEPPLDIAFGADGEVFNDYKYRRSYDSDFTAPLVLYHVWPALMENDCVIMKGEAVTRRGAFWSSVRSVSRCRSRSLSPICSRSRIGLSAISRSRSPSPIRCVLPRF
SIO_010081: SPATA18
subclass of: SO_0000673
so part of: SPATA18
location: complement(join(9578640..9578647,9578944..9578989,9582020..9582103,9584289..9584412,9586984..9587159,9587992..9588150,9589897..9590194,9592321..9592569,9594574..9594669,9600499..9600611,9601912..9602027,9602161..9602266,9609742..9609828))
location: region:9578640-9609828:-1
so has part: feature:9609742-9609828:-1:exon
so has part: feature:9602161-9602266:-1:exon
so has part: feature:9601912-9602027:-1:exon
so has part: feature:9600499-9600611:-1:exon
so has part: feature:9594574-9594669:-1:exon
so has part: feature:9592321-9592569:-1:exon
so has part: feature:9589897-9590194:-1:exon
so has part: feature:9587992-9588150:-1:exon
so has part: feature:9586984-9587159:-1:exon
so has part: feature:9584289-9584412:-1:exon
so has part: feature:9582020-9582103:-1:exon
so has part: feature:9578944-9578989:-1:exon
so has part: feature:9578640-9578647:-1:exon

XP_012624214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9609742-9609828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9602161-9602266:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9601912-9602027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9600499-9600611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9594574-9594669:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9592321-9592569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9589897-9590194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9587992-9588150:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9586984-9587159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9584289-9584412:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9582020-9582103:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9578944-9578989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9578640-9578647:-1:exon

SPATA18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SPATA18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondria-eating protein isoform X4
translation: MLKSLQSQEKARHRSSDCRDLDSRRPEPRSSPRSSPRVTTKHSSSRRSSEQRDADPSSRYESQMRNLKDEIAVLSSEKSPLQRRPSRSRSPSPDPCSHSRSHSRSHSRSRSRSRSRSGSPSTHLKIRTPSPNRSKLSNVARKAALLSRFSDAYSQARLDAQCLLRRCIDKAETVQRIIYIATVEAFHVAKMAFRHFKIRVRKSLTPSYAGSNDFENAVSDYIICHLDSYDVQSSVNDVIRAMNINPKISFPPEVDFCILSDFIREICCIAFAMQALEPPLDIAFGADGEVFNDYKYRRSYDSDFTAPLVLYHVWPALMENDCVIMKGEAVTRRGAFWSSVRSVSRCRSRSLSPICSRSRIGLSAISRSRSPSPIRCVLPRF
SIO_010081: SPATA18
subclass of: SO_0000673
so part of: SPATA18
location: complement(join(9578640..9578647,9578944..9578989,9582020..9582103,9584289..9584412,9586984..9587159,9587992..9588150,9589897..9590194,9592321..9592569,9600488..9600489))
location: region:9578640-9600489:-1
so has part: feature:9600488-9600489:-1:exon
so has part: feature:9592321-9592569:-1:exon
so has part: feature:9589897-9590194:-1:exon
so has part: feature:9587992-9588150:-1:exon
so has part: feature:9586984-9587159:-1:exon
so has part: feature:9584289-9584412:-1:exon
so has part: feature:9582020-9582103:-1:exon
so has part: feature:9578944-9578989:-1:exon
so has part: feature:9578640-9578647:-1:exon

XP_020140233.1
type: Protein
SIO_000068: ncbiprotein

position:9600489:-1
position: 9600489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9600488-9600489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9592321-9592569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9589897-9590194:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9587992-9588150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9586984-9587159:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9584289-9584412:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9582020-9582103:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9578944-9578989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9578640-9578647:-1:exon

SPATA18
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: SPATA18
product: spermatogenesis associated 18, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001155153.2
SIO_010081: SPATA18
so part of: SPATA18
location: complement(join(9578954..9578989,9579628..9579643,9582020..9582103,9584239..9584412,9586984..9587159,9587992..9588150,9589897..9590194,9592321..9592569,9594574..9594669,9600499..9600611,9601912..9602027,9602161..9602266,9609742..9610067))
location: region:9578954-9610067:-1
so has part: feature:9609742-9610067:-1:exon
so has part: feature:9602161-9602266:-1:exon
so has part: feature:9601912-9602027:-1:exon
so has part: feature:9600499-9600611:-1:exon
so has part: feature:9594574-9594669:-1:exon
so has part: feature:9592321-9592569:-1:exon
so has part: feature:9589897-9590194:-1:exon
so has part: feature:9587992-9588150:-1:exon
so has part: feature:9586984-9587159:-1:exon
so has part: feature:9584239-9584412:-1:exon
so has part: feature:9582020-9582103:-1:exon
so has part: feature:9579628-9579643:-1:exon
so has part: feature:9578954-9578989:-1:exon

position:9578954:-1
position: 9578954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9609742-9610067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9602161-9602266:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9601912-9602027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9600499-9600611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9594574-9594669:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9592321-9592569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9589897-9590194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9587992-9588150:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9586984-9587159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9584239-9584412:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9582020-9582103:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9579628-9579643:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9578954-9578989:-1:exon

SPATA18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SPATA18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondria-eating protein isoform X2
translation: MADNLRRLVSSECVRTLQEKLCCWLEEYNTNTCDQNLNICLELIEQVAKVQGQLFGILTTAAQEGGHNDGVETIKSRLLPWLENSFTAASMGKPVDSRVPSLQDTFDKERHKDSGSRDRDLQQLDSDLNSTRNQLNKVQDDLAETEKTLEETKTRSAISLLAAEEEINQLKKQLKSLQSQEKARHRSSDCRDLDSRRPEPRSSPRSSPRVTTKHSSSRRSSEQRDADPSSRYESQMRNLKDEIAVLSSEKSPLQRRPSRSRSPSPDPCSHSRSHSRSHSRSRSRSRSRSGSPSTHLKIRTPSPNRSKLSNVARKAALLSRFSDAYSQARLDAQCLLRRCIDKAETVQRIIYIATVEAFHVAKMAFRHFKIRVRKSLTPSYAGSNDFENAVSDYIICHLDSYDVQSSVNDVIRAMNINPKISFPPEVDFCILSDFIREICCIAFAMQALEPPLDIAFGADGEVFNDYKYRRSYDSDFTAPLVLYHVWPALMENDCVIMKGEAVTRRGAFWSSVRSVSRCRSRSLSPICSRSRIGLSAVWLI
SIO_010081: SPATA18
subclass of: SO_0000673
so part of: SPATA18
location: complement(join(9579629..9579643,9582020..9582103,9584289..9584412,9586984..9587159,9587992..9588150,9589897..9590194,9592321..9592569,9594574..9594669,9600499..9600611,9601912..9602027,9602161..9602266,9609742..9609828))
location: region:9579629-9609828:-1
so has part: feature:9609742-9609828:-1:exon
so has part: feature:9602161-9602266:-1:exon
so has part: feature:9601912-9602027:-1:exon
so has part: feature:9600499-9600611:-1:exon
so has part: feature:9594574-9594669:-1:exon
so has part: feature:9592321-9592569:-1:exon
so has part: feature:9589897-9590194:-1:exon
so has part: feature:9587992-9588150:-1:exon
so has part: feature:9586984-9587159:-1:exon
so has part: feature:9584289-9584412:-1:exon
so has part: feature:9582020-9582103:-1:exon
so has part: feature:9579629-9579643:-1:exon

XP_012624215.1
type: Protein
SIO_000068: ncbiprotein

position:9579629:-1
position: 9579629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9609742-9609828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9602161-9602266:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9601912-9602027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9600499-9600611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9594574-9594669:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9592321-9592569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9589897-9590194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9587992-9588150:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9586984-9587159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9584289-9584412:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9582020-9582103:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9579629-9579643:-1:exon

SGCB
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: SGCB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9618785..9628818
location: region:9618785-9628818:1
so has part: feature:9618785-9628818:1:exon
subclass of: SO_0000010

105873648
type: Gene
SIO_000068: ncbigene

position:9618785:1
position: 9618785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9628818:1
position: 9628818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9618785-9628818:1:exon

SGCB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SGCB
product: sarcoglycan beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 89 ESTs, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012768759.2
SIO_010081: SGCB
subclass of: SO_0000673
so part of: SGCB
location: join(9618785..9618838,9621166..9621375,9623881..9624066,9624750..9624941,9625269..9625400,9628506..9628818)
location: region:9618785-9628818:1
so has part: feature:9618785-9618838:1:exon
so has part: feature:9621166-9621375:1:exon
so has part: feature:9623881-9624066:1:exon
so has part: feature:9624750-9624941:1:exon
so has part: feature:9625269-9625400:1:exon
so has part: feature:9628506-9628818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9618785-9618838:1:exon

position:9618838:1
position: 9618838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9621166-9621375:1:exon

position:9621166:1
position: 9621166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9621375:1
position: 9621375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9623881-9624066:1:exon

position:9623881:1
position: 9623881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9624066:1
position: 9624066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9624750-9624941:1:exon

position:9624750:1
position: 9624750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9624941:1
position: 9624941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9625269-9625400:1:exon

position:9625269:1
position: 9625269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9625400:1
position: 9625400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9628506-9628818:1:exon

position:9628506:1
position: 9628506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SGCB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SGCB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-sarcoglycan
translation: MAAAAAAATEQQSSNGPVKKSMREKAVERRNVNKEHNSNFKAGYIPIDEDRLHKTGLRGRKGNLAICVIILLFILAVINLIITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKSTVGGRRNENLVITGNNQPIVFQQGTTKLSVEKNKTSITSDIGMQFFDPRTQNILFSTDYETHEFHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIVRGNEGVFIMGKTIEFHMGGNMEFKAENSIILNGTVVVSTARLPGSSGGDQLGAGDWVRYKLCVCADGTLFKVQVTGQNMGCQVSDNPCGNTH
SIO_010081: SGCB
subclass of: SO_0000673
so part of: SGCB
location: join(9618806..9618838,9621166..9621375,9623881..9624066,9624750..9624941,9625269..9625400,9628506..9628709)
location: region:9618806-9628709:1
so has part: feature:9618806-9618838:1:exon
so has part: feature:9621166-9621375:1:exon
so has part: feature:9623881-9624066:1:exon
so has part: feature:9624750-9624941:1:exon
so has part: feature:9625269-9625400:1:exon
so has part: feature:9628506-9628709:1:exon

XP_012624213.1
type: Protein
SIO_000068: ncbiprotein

position:9618806:1
position: 9618806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9628709:1
position: 9628709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9618806-9618838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9621166-9621375:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9623881-9624066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9624750-9624941:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9625269-9625400:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9628506-9628709:1:exon

LRRC66
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LRRC66
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9629136..9649033
location: region:9629136-9649033:1
so has part: feature:9629136-9649033:1:exon
subclass of: SO_0000010

105873647
type: Gene
SIO_000068: ncbigene

position:9629136:1
position: 9629136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9649033:1
position: 9649033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9629136-9649033:1:exon

LRRC66
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LRRC66
product: leucine rich repeat containing 66
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012768758.2
SIO_010081: LRRC66
subclass of: SO_0000673
so part of: LRRC66
location: join(9629136..9632429,9635717..9636214,9639306..9639475,9645319..9645508,9647005..9649033)
location: region:9629136-9649033:1
so has part: feature:9629136-9632429:1:exon
so has part: feature:9635717-9636214:1:exon
so has part: feature:9639306-9639475:1:exon
so has part: feature:9645319-9645508:1:exon
so has part: feature:9647005-9649033:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9629136-9632429:1:exon

position:9632429:1
position: 9632429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9635717-9636214:1:exon

position:9635717:1
position: 9635717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9636214:1
position: 9636214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9639306-9639475:1:exon

position:9639306:1
position: 9639306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9639475:1
position: 9639475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9645319-9645508:1:exon

position:9645319:1
position: 9645319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9645508:1
position: 9645508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9647005-9649033:1:exon

position:9647005:1
position: 9647005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRRC66
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LRRC66
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 66
translation: MKIFCFRVITIVIGLYFTGTMTNPSRKSSIPFNSECQWSEYLLTNCSFTRKHDIPVGVPQTAATVDRSLSFFRVLLQSHTRKEWKRKHLDLSNNLISKITLRPLAYLRTLEVLNLSNNAILSVLLHLPRPKSSWVRSPRGSFTNGLPFLKVLVLQRNKLSAVPKGLWKLKSLQSLDLSFNGILQIGLTDFHKCLQLENLYLKSNKIFRIHPEAFRDLKKLQVVDLSNNALTAVLPMMVMALELPHLQVDLAGNRWQCDSSMAVFQNFISESWRKNWNVICNKSLAAGNDEARHRPPVHVSRGSVAAAGWPGPGGHLGAPTPGRRRRARDVRAADREEDAAGSLALAVSLSVVITFLAAFCLGAVARPYLDRLWRRSGCRGRPRPARAYSNAGFYEDVVGDSAPRPCENRDRLWVAAPSPHGAAASPGWAPGGDGWGPSGRDRPRPHPDACDRGAAPALAQGRAYSSDVPGDLDYDTVAQEQPAAGVPSVAGTSPTVLGCSPSGWDPALSRAAAASGWEMHLKARGTGESQEGGDTAQSPWGGARWPMAFCKEIPASAPQGLRGAPQHRLEGADAPGHTAPAAFPPTWGGCLDVEEPVREAAPADSQPGLESHHHYDDSDDDDDEGSLFTMSSVSSEGAGDGWEAGEPLQDEGSGASRDNVTSPASLGDSVTFQNILGSCENPGDGFEEPLVSGADSGLCKTPPENASDLSAFEGPSPLPRSLGNSATAHEMPGVCVYDTEPESEPAKWHCSLRDLEFFSVDVLPPTPPNSAEPDESVRDSGICQQKPSPRGAGTAQREIPFEITAGQTVRPSQQDPEGDGNSDELETEADDGFACPPADWDSSKAISQMQLLQSDGDEPALRREGGGGEYFEDGSKHHAPSFRELPKETSSLRAQERLSDGDWGEYSEENLLPLEKGGSGVHSQRQTQSSPLGAGVLGEEQLNHDKDKGIQPDNQTEFK
SIO_010081: LRRC66
subclass of: SO_0000673
so part of: LRRC66
location: join(9635722..9636214,9639306..9639475,9645319..9645508,9647005..9649031)
location: region:9635722-9649031:1
so has part: feature:9635722-9636214:1:exon
so has part: feature:9639306-9639475:1:exon
so has part: feature:9645319-9645508:1:exon
so has part: feature:9647005-9649031:1:exon

XP_012624212.1
type: Protein
SIO_000068: ncbiprotein

position:9635722:1
position: 9635722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9649031:1
position: 9649031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9635722-9636214:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9639306-9639475:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9645319-9645508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9647005-9649031:1:exon

DCUN1D4
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: DCUN1D4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9665883..9762379)
location: region:9665883-9762379:-1
so has part: feature:9665883-9762379:-1:exon
subclass of: SO_0000010

105873645
type: Gene
SIO_000068: ncbigene

position:9665883:-1
position: 9665883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9762379:-1
position: 9762379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9665883-9762379:-1:exon

DCUN1D4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: DCUN1D4
product: defective in cullin neddylation 1 domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012768751.1
SIO_010081: DCUN1D4
subclass of: SO_0000673
so part of: DCUN1D4
location: complement(join(9665883..9669230,9669331..9669433,9671694..9671798,9683618..9683726,9688652..9688743,9692854..9692924,9700668..9700759,9704511..9704625,9726537..9726576,9726765..9726835,9762048..9762108,9762284..9762379))
location: region:9665883-9762379:-1
so has part: feature:9762284-9762379:-1:exon
so has part: feature:9762048-9762108:-1:exon
so has part: feature:9726765-9726835:-1:exon
so has part: feature:9726537-9726576:-1:exon
so has part: feature:9704511-9704625:-1:exon
so has part: feature:9700668-9700759:-1:exon
so has part: feature:9692854-9692924:-1:exon
so has part: feature:9688652-9688743:-1:exon
so has part: feature:9683618-9683726:-1:exon
so has part: feature:9671694-9671798:-1:exon
so has part: feature:9669331-9669433:-1:exon
so has part: feature:9665883-9669230:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9762284-9762379:-1:exon

position:9762284:-1
position: 9762284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9762048-9762108:-1:exon

position:9762048:-1
position: 9762048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9762108:-1
position: 9762108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9726765-9726835:-1:exon

position:9726765:-1
position: 9726765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9726835:-1
position: 9726835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9726537-9726576:-1:exon

position:9726537:-1
position: 9726537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9726576:-1
position: 9726576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9704511-9704625:-1:exon

position:9704511:-1
position: 9704511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9704625:-1
position: 9704625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9700668-9700759:-1:exon

position:9700668:-1
position: 9700668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9700759:-1
position: 9700759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9692854-9692924:-1:exon

position:9692854:-1
position: 9692854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9692924:-1
position: 9692924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9688652-9688743:-1:exon

position:9688652:-1
position: 9688652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9688743:-1
position: 9688743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9683618-9683726:-1:exon

position:9683618:-1
position: 9683618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9683726:-1
position: 9683726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9671694-9671798:-1:exon

position:9671694:-1
position: 9671694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9671798:-1
position: 9671798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9669331-9669433:-1:exon

position:9669331:-1
position: 9669331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9669433:-1
position: 9669433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9665883-9669230:-1:exon

position:9669230:-1
position: 9669230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCUN1D4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: DCUN1D4
product: defective in cullin neddylation 1 domain containing 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001155151.1
SIO_010081: DCUN1D4
so part of: DCUN1D4
location: complement(join(9665883..9669230,9669331..9669433,9671694..9671798,9674005..9674068,9683618..9683726,9688652..9688743,9692854..9692924,9700668..9700759,9704511..9704625,9726537..9726576,9726765..9726880,9762048..9762108,9762284..9762379))
location: region:9665883-9762379:-1
so has part: feature:9762284-9762379:-1:exon
so has part: feature:9762048-9762108:-1:exon
so has part: feature:9726765-9726880:-1:exon
so has part: feature:9726537-9726576:-1:exon
so has part: feature:9704511-9704625:-1:exon
so has part: feature:9700668-9700759:-1:exon
so has part: feature:9692854-9692924:-1:exon
so has part: feature:9688652-9688743:-1:exon
so has part: feature:9683618-9683726:-1:exon
so has part: feature:9674005-9674068:-1:exon
so has part: feature:9671694-9671798:-1:exon
so has part: feature:9669331-9669433:-1:exon
so has part: feature:9665883-9669230:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9762284-9762379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9762048-9762108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9726765-9726880:-1:exon

position:9726880:-1
position: 9726880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9726537-9726576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9704511-9704625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9700668-9700759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9692854-9692924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9688652-9688743:-1:exon

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SIO_000300: 9
SIO_000628: feature:9683618-9683726:-1:exon

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SIO_000300: 10
SIO_000628: feature:9674005-9674068:-1:exon

position:9674005:-1
position: 9674005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9674068:-1
position: 9674068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9671694-9671798:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9669331-9669433:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9665883-9669230:-1:exon

DCUN1D4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: DCUN1D4
product: defective in cullin neddylation 1 domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001155150.1
SIO_010081: DCUN1D4
so part of: DCUN1D4
location: complement(join(9665883..9669230,9669331..9669433,9671694..9671798,9673978..9674068,9683618..9683726,9688652..9688743,9692854..9692924,9700668..9700759,9704511..9704625,9726537..9726576,9726765..9726880,9762048..9762108,9762284..9762379))
location: region:9665883-9762379:-1
so has part: feature:9762284-9762379:-1:exon
so has part: feature:9762048-9762108:-1:exon
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so has part: feature:9665883-9669230:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9762284-9762379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9762048-9762108:-1:exon

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SIO_000300: 3
SIO_000628: feature:9726765-9726880:-1:exon

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SIO_000300: 4
SIO_000628: feature:9726537-9726576:-1:exon

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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
SIO_000628: feature:9688652-9688743:-1:exon

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SIO_000300: 9
SIO_000628: feature:9683618-9683726:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9673978-9674068:-1:exon

position:9673978:-1
position: 9673978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9671694-9671798:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9669331-9669433:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9665883-9669230:-1:exon

DCUN1D4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: DCUN1D4
product: defective in cullin neddylation 1 domain containing 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 133 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012768756.1
SIO_010081: DCUN1D4
subclass of: SO_0000673
so part of: DCUN1D4
location: complement(join(9665883..9669230,9669331..9669433,9683618..9683726,9688652..9688743,9692854..9692924,9700668..9700759,9704511..9704625,9726537..9726576,9726765..9726835,9749062..9749278))
location: region:9665883-9749278:-1
so has part: feature:9749062-9749278:-1:exon
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so has part: feature:9669331-9669433:-1:exon
so has part: feature:9665883-9669230:-1:exon

position:9749278:-1
position: 9749278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9749062-9749278:-1:exon

position:9749062:-1
position: 9749062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9726765-9726835:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9726537-9726576:-1:exon

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SIO_000300: 4
SIO_000628: feature:9704511-9704625:-1:exon

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SIO_000300: 5
SIO_000628: feature:9700668-9700759:-1:exon

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SIO_000300: 6
SIO_000628: feature:9692854-9692924:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9688652-9688743:-1:exon

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SIO_000300: 8
SIO_000628: feature:9683618-9683726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9669331-9669433:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9665883-9669230:-1:exon

DCUN1D4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: DCUN1D4
product: defective in cullin neddylation 1 domain containing 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012768753.2
SIO_010081: DCUN1D4
subclass of: SO_0000673
so part of: DCUN1D4
location: complement(join(9665883..9669230,9669331..9669433,9671694..9671798,9683618..9683726,9688652..9688743,9692854..9692924,9700668..9700759,9704511..9704625,9726537..9726576,9726765..9726880,9749062..9749194))
location: region:9665883-9749194:-1
so has part: feature:9749062-9749194:-1:exon
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so has part: feature:9665883-9669230:-1:exon

position:9749194:-1
position: 9749194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9749062-9749194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9726765-9726880:-1:exon

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SIO_000300: 3
SIO_000628: feature:9726537-9726576:-1:exon

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SIO_000300: 4
SIO_000628: feature:9704511-9704625:-1:exon

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SIO_000300: 5
SIO_000628: feature:9700668-9700759:-1:exon

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SIO_000300: 6
SIO_000628: feature:9692854-9692924:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9688652-9688743:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9683618-9683726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9671694-9671798:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9669331-9669433:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9665883-9669230:-1:exon

DCUN1D4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: DCUN1D4
product: defective in cullin neddylation 1 domain containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012768752.2
SIO_010081: DCUN1D4
subclass of: SO_0000673
so part of: DCUN1D4
location: complement(join(9665883..9669230,9669331..9669433,9671694..9671798,9683618..9683726,9688652..9688743,9692854..9692924,9700668..9700759,9704511..9704625,9726537..9726576,9726765..9726835,9747194..9747295))
location: region:9665883-9747295:-1
so has part: feature:9747194-9747295:-1:exon
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position:9747295:-1
position: 9747295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition