Microcebus murinus isolate mixed chromosome 29, Mmur_3.0, whole genome shotgun sequence.
type: Entry
definition: Microcebus murinus isolate mixed chromosome 29, Mmur_3.0, whole genome shotgun sequence.
sequence version: NC_033688.1
sequence date: 2017-02-27
sequence: sequence
division: CON
label: NC_033688.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA285159
dblink: SAMN06275470
keyword: WGS
keyword: RefSeq
source: Microcebus murinus (gray mouse lemur)
organism: Microcebus murinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM007689.1.\nAssembly name: Mmur_3.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2017/02/06. The original whole-genome shotgun project has the\naccession ABDC00000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Date :: MAY-2015\nAssembly Method :: AllPathsLG v. 41070; Atlas Link v. 1.0;\n Atlas GapFill v. 2.0; PBJelly2 v. 14.9.9;\n Lachesis v. shendurelab-LACHESIS-2151de9;\n BioNano IrysSolve v. 2.1\nPolishing Method :: Pilon v 1.18\nAssembly Name :: Mmur_3.0\nGenome Coverage :: 221.6x\nSequencing Technology :: Illumina; PacBio RS; PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Microcebus murinus Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 23278169
topology: linear
so has quality: SO_0000987
location: 1..23278169
location: region:1-23278169:1
RO_0002162: 30608

NC_033688
type: RefSeq
SIO_000068: refseq

PRJNA285159
type: BioProject
SIO_000068: bioproject

SAMN06275470
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23278169:1
position: 23278169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23278169:1:source
so part of: sequence
organism: Microcebus murinus
mol type: genomic DNA
isolate: mixed
chromosome: 29
sex: pooled male and female
tissue type: liver; kidney
note: three separate animals were used in this assembly: #8(Reference animal), 1886F (Citronella), 7006M (Rosehip)

30608
type: Taxonomy
SIO_000068: taxonomy

LOC105864290
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105864290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(63851..197554)
location: region:63851-197554:-1
so has part: feature:63851-197554:-1:exon
subclass of: SO_0000010

105864290
type: Gene
SIO_000068: ncbigene

position:63851:-1
position: 63851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197554:-1
position: 197554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63851-197554:-1:exon

LOC105864290
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864290
product: tyrosine-protein phosphatase non-receptor type 13, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020284596.1
SIO_010081: LOC105864290
subclass of: SO_0000673
so part of: LOC105864290
location: complement(join(63851..64451,65447..65913,69684..69815,69983..70090,70379..70468,75495..75551,77341..77438,77582..77999,82778..82940,86830..87012,90387..90539,90898..91036,91315..91468,93707..93881,94007..94081,97643..97862,102075..102168,102567..102662,117392..117952,125171..125258,130305..130490,132953..133018,138936..139114,161257..161376,196996..197554))
location: region:63851-197554:-1
so has part: feature:196996-197554:-1:exon
so has part: feature:161257-161376:-1:exon
so has part: feature:138936-139114:-1:exon
so has part: feature:132953-133018:-1:exon
so has part: feature:130305-130490:-1:exon
so has part: feature:125171-125258:-1:exon
so has part: feature:117392-117952:-1:exon
so has part: feature:102567-102662:-1:exon
so has part: feature:102075-102168:-1:exon
so has part: feature:97643-97862:-1:exon
so has part: feature:94007-94081:-1:exon
so has part: feature:93707-93881:-1:exon
so has part: feature:91315-91468:-1:exon
so has part: feature:90898-91036:-1:exon
so has part: feature:90387-90539:-1:exon
so has part: feature:86830-87012:-1:exon
so has part: feature:82778-82940:-1:exon
so has part: feature:77582-77999:-1:exon
so has part: feature:77341-77438:-1:exon
so has part: feature:75495-75551:-1:exon
so has part: feature:70379-70468:-1:exon
so has part: feature:69983-70090:-1:exon
so has part: feature:69684-69815:-1:exon
so has part: feature:65447-65913:-1:exon
so has part: feature:63851-64451:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196996-197554:-1:exon

position:196996:-1
position: 196996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161257-161376:-1:exon

position:161257:-1
position: 161257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161376:-1
position: 161376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:138936-139114:-1:exon

position:138936:-1
position: 138936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139114:-1
position: 139114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:132953-133018:-1:exon

position:132953:-1
position: 132953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133018:-1
position: 133018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:130305-130490:-1:exon

position:130305:-1
position: 130305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130490:-1
position: 130490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:125171-125258:-1:exon

position:125171:-1
position: 125171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125258:-1
position: 125258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:117392-117952:-1:exon

position:117392:-1
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reference: sequence
type: ReverseStrandPosition
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position:117952:-1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:102567-102662:-1:exon

position:102567:-1
position: 102567
reference: sequence
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type: ExactPosition

position:102662:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:102075-102168:-1:exon

position:102075:-1
position: 102075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102168:-1
position: 102168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:97643-97862:-1:exon

position:97643:-1
position: 97643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97862:-1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:94007-94081:-1:exon

position:94007:-1
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reference: sequence
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position:94081:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:93707-93881:-1:exon

position:93707:-1
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position:93881:-1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:91315-91468:-1:exon

position:91315:-1
position: 91315
reference: sequence
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type: ExactPosition

position:91468:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:90898-91036:-1:exon

position:90898:-1
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:90387-90539:-1:exon

position:90387:-1
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reference: sequence
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position:90539:-1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:86830-87012:-1:exon

position:86830:-1
position: 86830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87012:-1
position: 87012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:82778-82940:-1:exon

position:82778:-1
position: 82778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82940:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:77582-77999:-1:exon

position:77582:-1
position: 77582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77999:-1
position: 77999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:77341-77438:-1:exon

position:77341:-1
position: 77341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77438:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:75495-75551:-1:exon

position:75495:-1
position: 75495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75551:-1
position: 75551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:70379-70468:-1:exon

position:70379:-1
position: 70379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70468:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:69983-70090:-1:exon

position:69983:-1
position: 69983
reference: sequence
type: ReverseStrandPosition
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position:70090:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:69684-69815:-1:exon

position:69684:-1
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reference: sequence
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position:69815:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:65447-65913:-1:exon

position:65447:-1
position: 65447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65913:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:63851-64451:-1:exon

position:64451:-1
position: 64451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105864290
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864290
product: tyrosine-protein phosphatase non-receptor type 13, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 21 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_020284599.1
SIO_010081: LOC105864290
subclass of: SO_0000673
so part of: LOC105864290
location: complement(join(63852..64451,65447..65913,69684..69815,69983..70090,70379..70468,82778..82940,86830..87012,90387..90539,90898..91036,91315..91468,93707..93881,94007..94081,97643..97865,102075..102168,102567..102662,117392..117952,125171..125258,130305..130490,132953..133018,138936..139114,161257..161376,196996..197455))
location: region:63852-197455:-1
so has part: feature:196996-197455:-1:exon
so has part: feature:161257-161376:-1:exon
so has part: feature:138936-139114:-1:exon
so has part: feature:132953-133018:-1:exon
so has part: feature:130305-130490:-1:exon
so has part: feature:125171-125258:-1:exon
so has part: feature:117392-117952:-1:exon
so has part: feature:102567-102662:-1:exon
so has part: feature:102075-102168:-1:exon
so has part: feature:97643-97865:-1:exon
so has part: feature:94007-94081:-1:exon
so has part: feature:93707-93881:-1:exon
so has part: feature:91315-91468:-1:exon
so has part: feature:90898-91036:-1:exon
so has part: feature:90387-90539:-1:exon
so has part: feature:86830-87012:-1:exon
so has part: feature:82778-82940:-1:exon
so has part: feature:70379-70468:-1:exon
so has part: feature:69983-70090:-1:exon
so has part: feature:69684-69815:-1:exon
so has part: feature:65447-65913:-1:exon
so has part: feature:63852-64451:-1:exon

position:63852:-1
position: 63852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197455:-1
position: 197455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196996-197455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161257-161376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138936-139114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132953-133018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130305-130490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:125171-125258:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117392-117952:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102567-102662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102075-102168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97643-97865:-1:exon

position:97865:-1
position: 97865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:94007-94081:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:93707-93881:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91315-91468:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:90898-91036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90387-90539:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:86830-87012:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:82778-82940:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:70379-70468:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:69983-70090:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:69684-69815:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:65447-65913:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:63852-64451:-1:exon

LOC105864290
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864290
product: tyrosine-protein phosphatase non-receptor type 13, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 25 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_020284597.1
SIO_010081: LOC105864290
subclass of: SO_0000673
so part of: LOC105864290
location: complement(join(63852..64451,65447..65913,69684..69815,69983..70090,70379..70468,77341..77438,77582..77999,82778..82940,86830..87012,90387..90539,90898..91036,91315..91468,93707..93881,94007..94081,97643..97865,102075..102168,102567..102662,117392..117952,125171..125258,130305..130490,132953..133018,138936..139114,161257..161376,196996..197455))
location: region:63852-197455:-1
so has part: feature:196996-197455:-1:exon
so has part: feature:161257-161376:-1:exon
so has part: feature:138936-139114:-1:exon
so has part: feature:132953-133018:-1:exon
so has part: feature:130305-130490:-1:exon
so has part: feature:125171-125258:-1:exon
so has part: feature:117392-117952:-1:exon
so has part: feature:102567-102662:-1:exon
so has part: feature:102075-102168:-1:exon
so has part: feature:97643-97865:-1:exon
so has part: feature:94007-94081:-1:exon
so has part: feature:93707-93881:-1:exon
so has part: feature:91315-91468:-1:exon
so has part: feature:90898-91036:-1:exon
so has part: feature:90387-90539:-1:exon
so has part: feature:86830-87012:-1:exon
so has part: feature:82778-82940:-1:exon
so has part: feature:77582-77999:-1:exon
so has part: feature:77341-77438:-1:exon
so has part: feature:70379-70468:-1:exon
so has part: feature:69983-70090:-1:exon
so has part: feature:69684-69815:-1:exon
so has part: feature:65447-65913:-1:exon
so has part: feature:63852-64451:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196996-197455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161257-161376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138936-139114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132953-133018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130305-130490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:125171-125258:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117392-117952:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102567-102662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102075-102168:-1:exon

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SIO_000300: 10
SIO_000628: feature:97643-97865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94007-94081:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:93707-93881:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91315-91468:-1:exon

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SIO_000300: 14
SIO_000628: feature:90898-91036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90387-90539:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:86830-87012:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:82778-82940:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:77582-77999:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77341-77438:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:70379-70468:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:69983-70090:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:69684-69815:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:65447-65913:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:63852-64451:-1:exon

LOC105864290
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864290
product: tyrosine-protein phosphatase non-receptor type 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 24 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_020284594.1
SIO_010081: LOC105864290
subclass of: SO_0000673
so part of: LOC105864290
location: complement(join(63853..64451,65447..65913,69684..69815,69983..70090,70379..70468,75495..75551,77341..77438,77582..77999,82778..82940,86830..87012,90387..90539,90898..91036,91315..91468,93707..93881,94007..94081,97643..97865,102075..102168,102567..102662,117392..117952,125171..125258,130305..130490,132953..133018,138936..139114,161257..161376,196996..197554))
location: region:63853-197554:-1
so has part: feature:196996-197554:-1:exon
so has part: feature:161257-161376:-1:exon
so has part: feature:138936-139114:-1:exon
so has part: feature:132953-133018:-1:exon
so has part: feature:130305-130490:-1:exon
so has part: feature:125171-125258:-1:exon
so has part: feature:117392-117952:-1:exon
so has part: feature:102567-102662:-1:exon
so has part: feature:102075-102168:-1:exon
so has part: feature:97643-97865:-1:exon
so has part: feature:94007-94081:-1:exon
so has part: feature:93707-93881:-1:exon
so has part: feature:91315-91468:-1:exon
so has part: feature:90898-91036:-1:exon
so has part: feature:90387-90539:-1:exon
so has part: feature:86830-87012:-1:exon
so has part: feature:82778-82940:-1:exon
so has part: feature:77582-77999:-1:exon
so has part: feature:77341-77438:-1:exon
so has part: feature:75495-75551:-1:exon
so has part: feature:70379-70468:-1:exon
so has part: feature:69983-70090:-1:exon
so has part: feature:69684-69815:-1:exon
so has part: feature:65447-65913:-1:exon
so has part: feature:63853-64451:-1:exon

position:63853:-1
position: 63853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196996-197554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161257-161376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138936-139114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132953-133018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130305-130490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:125171-125258:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117392-117952:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102567-102662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102075-102168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97643-97865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94007-94081:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:93707-93881:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91315-91468:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:90898-91036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90387-90539:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:86830-87012:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:82778-82940:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:77582-77999:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77341-77438:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75495-75551:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:70379-70468:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:69983-70090:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:69684-69815:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:65447-65913:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:63853-64451:-1:exon

LOC105864290
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864290
product: tyrosine-protein phosphatase non-receptor type 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284595.1
SIO_010081: LOC105864290
subclass of: SO_0000673
so part of: LOC105864290
location: complement(join(63853..64451,65447..65913,69684..69815,69983..70090,70379..70468,75495..75551,77341..77438,77582..77999,82778..82940,86830..87012,90387..90539,90898..91036,91315..91468,93707..93881,94007..94081,97643..97865,102075..102168,102567..102662,117392..117952,125171..125258,130305..130490,132953..133018,138936..139114,161257..161376,161586..161778))
location: region:63853-161778:-1
so has part: feature:161586-161778:-1:exon
so has part: feature:161257-161376:-1:exon
so has part: feature:138936-139114:-1:exon
so has part: feature:132953-133018:-1:exon
so has part: feature:130305-130490:-1:exon
so has part: feature:125171-125258:-1:exon
so has part: feature:117392-117952:-1:exon
so has part: feature:102567-102662:-1:exon
so has part: feature:102075-102168:-1:exon
so has part: feature:97643-97865:-1:exon
so has part: feature:94007-94081:-1:exon
so has part: feature:93707-93881:-1:exon
so has part: feature:91315-91468:-1:exon
so has part: feature:90898-91036:-1:exon
so has part: feature:90387-90539:-1:exon
so has part: feature:86830-87012:-1:exon
so has part: feature:82778-82940:-1:exon
so has part: feature:77582-77999:-1:exon
so has part: feature:77341-77438:-1:exon
so has part: feature:75495-75551:-1:exon
so has part: feature:70379-70468:-1:exon
so has part: feature:69983-70090:-1:exon
so has part: feature:69684-69815:-1:exon
so has part: feature:65447-65913:-1:exon
so has part: feature:63853-64451:-1:exon

position:161778:-1
position: 161778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161586-161778:-1:exon

position:161586:-1
position: 161586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161257-161376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138936-139114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132953-133018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130305-130490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:125171-125258:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117392-117952:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102567-102662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102075-102168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97643-97865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94007-94081:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:93707-93881:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91315-91468:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:90898-91036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90387-90539:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:86830-87012:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:82778-82940:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:77582-77999:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77341-77438:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75495-75551:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:70379-70468:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:69983-70090:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:69684-69815:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:65447-65913:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:63853-64451:-1:exon

LOC105864290
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864290
product: tyrosine-protein phosphatase non-receptor type 13, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_020284598.1
SIO_010081: LOC105864290
subclass of: SO_0000673
so part of: LOC105864290
location: complement(join(63855..64451,65447..65913,69684..69815,69983..70090,70379..70468,75495..75551,77341..77438,77582..77999,82778..82940,86830..87012,90387..90539,90898..91036,91315..91468,93707..93881,94007..94081,97643..97865,102075..102168,102567..102662,125171..125258,130305..130490,132953..133018,138936..139114,161257..161376,196996..197554))
location: region:63855-197554:-1
so has part: feature:196996-197554:-1:exon
so has part: feature:161257-161376:-1:exon
so has part: feature:138936-139114:-1:exon
so has part: feature:132953-133018:-1:exon
so has part: feature:130305-130490:-1:exon
so has part: feature:125171-125258:-1:exon
so has part: feature:102567-102662:-1:exon
so has part: feature:102075-102168:-1:exon
so has part: feature:97643-97865:-1:exon
so has part: feature:94007-94081:-1:exon
so has part: feature:93707-93881:-1:exon
so has part: feature:91315-91468:-1:exon
so has part: feature:90898-91036:-1:exon
so has part: feature:90387-90539:-1:exon
so has part: feature:86830-87012:-1:exon
so has part: feature:82778-82940:-1:exon
so has part: feature:77582-77999:-1:exon
so has part: feature:77341-77438:-1:exon
so has part: feature:75495-75551:-1:exon
so has part: feature:70379-70468:-1:exon
so has part: feature:69983-70090:-1:exon
so has part: feature:69684-69815:-1:exon
so has part: feature:65447-65913:-1:exon
so has part: feature:63855-64451:-1:exon

position:63855:-1
position: 63855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196996-197554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161257-161376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138936-139114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132953-133018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130305-130490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:125171-125258:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102567-102662:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102075-102168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97643-97865:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94007-94081:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:93707-93881:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91315-91468:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:90898-91036:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:90387-90539:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:86830-87012:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82778-82940:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:77582-77999:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:77341-77438:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:75495-75551:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:70379-70468:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:69983-70090:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:69684-69815:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:65447-65913:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:63855-64451:-1:exon

LOC105864290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 13 isoform X4
translation: MHVSLAEALEVRGGPLEEEEIWAVLNQSAESLQELFRKVSIADPAALGFIISPWSLLLLPSGSVSFTDENISNQDLRAFTAPEVLQNQSLTSLSDVEKIHIYSLGMTLYWGADHEVPQSQPIKLGDHLNSILLGMCEDVIYARVSVRTVLDACSAHIRNSNCAPSFSYVKHLVKLVLGNLPGMDQLPGNSEQRPDRSQAIRDRLRGKGLPTEPVRRYKTYHSDIFNTSSESPSIISSESDFRQVRRSEASKRFESSSGLPGVDETPSQGQSQRPSRQYETPLEGNLINQEIMLKRQEEEMMQLQARMALRQSRLSLYPGDTIKASMLDITRDPLREIALETAMTQRKLRNFFGPEFVKMTIEPFISLDLPRSILTKKGKNEDNRRKVNIMLLSGQRLELTCDTKTICKDVFDMVVAHIGLVEHHLFALATLKDNEYFFVDPDLKLTKVAPEGWKEEPKKKSKATVNFTLFFRIKFFMDDISLIQHTLTCHQYYLQLRKDILDERMHCDDETSLLLASLALQAEYGDYQPEVHGMSYFRLEHYLPARVMEKLDLSYIKEELPKLHNTYVGASEKETELEFLKVCQRLTEYGVHFHRVHPEKKSQTGILLGVCSKGVLVFEVHNGVRTLVLRFPWRETKKISFSKKKITLQNTSDGIKHAFQTENSKVCQYLLHLCSSQHKFQLQMRTRQSNQDAQDIERASFRSLNLQAESVRGFNMGRAVSTGSLAGSTLNKLAVRPLSVQAEILKRLSCSELSLYQPLQNNSKEKSDKASWEEKPKGMSKSYHDLSQASLYPHRKNAIVNMESPPQSIAELVGKPFHQMGRSDTESLAGFTKLNNSKSVASLNRSPERRKHESDSSSIEDPGQACVLGMTIHSSGNASSQVSLKDNDVLHKRWSVVSSPEREITLVNLKKDAKYGLGFQIIGGEKMGRLDLGVFISSITPGGPADLDGRLKPGDRLISVNSVSLEGVSHHTAIEILQNAPEDVTLVISQPKEKLSKVPSTPVHLANGMKNYLKKPSYMQDGAIDSSSEDHHWPRSTLRHISEGSFGLSGGLREGSLSSQDSRTESASLSQSQVNGFFASHLGDQTWQESQHVSSSSSVIPKGIEKKRISTDSNQSKAKKPAISDATDCSDHGESDMDEATYSSSQDHQTPKKEPSSSMNTCNKMNFKTFSSSPPKPGDIFEVELTKNDNSLGISVTVLFDKVFKCFLFLISSSLCISIYYLNYFAPKGHLSYIANIKIES
SIO_010081: LOC105864290
subclass of: SO_0000673
so part of: LOC105864290
location: complement(join(64185..64451,65447..65913,69684..69815,69983..70090,70379..70468,75495..75551,77341..77438,77582..77999,82778..82940,86830..87012,90387..90539,90898..91036,91315..91468,93707..93881,94007..94081,97643..97865,102075..102168,102567..102662,125171..125258,130305..130490,132953..133018,138936..139114,161257..161371))
location: region:64185-161371:-1
so has part: feature:161257-161371:-1:exon
so has part: feature:138936-139114:-1:exon
so has part: feature:132953-133018:-1:exon
so has part: feature:130305-130490:-1:exon
so has part: feature:125171-125258:-1:exon
so has part: feature:102567-102662:-1:exon
so has part: feature:102075-102168:-1:exon
so has part: feature:97643-97865:-1:exon
so has part: feature:94007-94081:-1:exon
so has part: feature:93707-93881:-1:exon
so has part: feature:91315-91468:-1:exon
so has part: feature:90898-91036:-1:exon
so has part: feature:90387-90539:-1:exon
so has part: feature:86830-87012:-1:exon
so has part: feature:82778-82940:-1:exon
so has part: feature:77582-77999:-1:exon
so has part: feature:77341-77438:-1:exon
so has part: feature:75495-75551:-1:exon
so has part: feature:70379-70468:-1:exon
so has part: feature:69983-70090:-1:exon
so has part: feature:69684-69815:-1:exon
so has part: feature:65447-65913:-1:exon
so has part: feature:64185-64451:-1:exon

XP_020140187.1
type: Protein
SIO_000068: ncbiprotein

position:64185:-1
position: 64185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161371:-1
position: 161371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161257-161371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138936-139114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132953-133018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130305-130490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125171-125258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102567-102662:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102075-102168:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97643-97865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:94007-94081:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:93707-93881:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:91315-91468:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:90898-91036:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:90387-90539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:86830-87012:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:82778-82940:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:77582-77999:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:77341-77438:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:75495-75551:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:70379-70468:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:69983-70090:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:69684-69815:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:65447-65913:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:64185-64451:-1:exon

LOC105864290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 13 isoform X2
translation: MHVSLAEALEVRGGPLEEEEIWAVLNQSAESLQELFRKVSIADPAALGFIISPWSLLLLPSGSVSFTDENISNQDLRAFTAPEVLQNQSLTSLSDVEKIHIYSLGMTLYWGADHEVPQSQPIKLGDHLNSILLGMCEDVIYARVSVRTVLDACSAHIRNSNCAPSFSYVKHLVKLVLGNLPGMDQLPGNSEQRPDRSQAIRDRLRGKGLPTGRSSTSDVLDIHKSPFSHQTFLNKGLSKSMGFLSIRDTQDEEDRFKDILSDNNSGHEDSENTCSPYQFKTSGPEKQVIPGIDVLPKKKIWASSMDLLCTADRDFSPGETGTSRHCHPVTVRTSTTPRKKEARYSDGSIALDIFGPQKMDPVYHTRELPTSTAISSALDRIRERQKKLQVLREAMNVEEPVRRYKTYHSDIFNTSSESPSIISSESDFRQVRRSEASKRFESSSGLPGVDETPSQGQSQRPRQYETPLEGNLINQEIMLKRQEEEMMQLQARMALRQSRLSLYPGDTIKASMLDITRDPLREIALETAMTQRKLRNFFGPEFVKMTIEPFISLDLPRSILTKKGKNEDNRRKVNIMLLSGQRLELTCDTKTICKDVFDMVVAHIGLVEHHLFALATLKDNEYFFVDPDLKLTKVAPEGWKEEPKKKSKATVNFTLFFRIKFFMDDISLIQHTLTCHQYYLQLRKDILDERMHCDDETSLLLASLALQAEYGDYQPEVHGMSYFRLEHYLPARVMEKLDLSYIKEELPKLHNTYVGASEKETELEFLKVCQRLTEYGVHFHRVHPEKKSQTGILLGVCSKGVLVFEVHNGVRTLVLRFPWRETKKISFSKKKITLQNTSDGIKHAFQTENSKVCQYLLHLCSSQHKFQLQMRTRQSNQDAQDIERASFRSLNLQAESVRGFNMGRAVSTGSLAGSTLNKLAVRPLSVQAEILKRLSCSELSLYQPLQNNSKEKSDKASWEEKPKGMSKSYHDLSQASLYPHRKNAIVNMESPPQSIAELVGKPFHQMGRSDTESLAGFTKLNNSKSVASLNRSPERRKHESDSSSIEDPGQACVLGMTIHSSGNASSQVSLKDNDVLHKRWSVVSSPEREITLVNLKKDAKYGLGFQIIGGEKMGRLDLGVFISSITPGGPADLDGRLKPGDRLISVNSVSLEGVSHHTAIEILQNAPEDVTLVISQPKEKLSKVPSTPVHLANGMKNYLKKPSYMQDGAIDSSSEDHHWPRSTLRHISEGSFGLSGGLREGSLSSQDSRTESASLSQSQVNGFFASHLGDQTWQESQHVSSSSSVIPKGIEKKRISTDSNQSKAKKPAISDATDCSDHGESDMDEATYSSSQDHQTPKKEPSSSMNTCNKMNFKTFSSSPPKPGDIFEVELTKNDNSLGISVTVLFDKVFKCFLFLISSSLCISIYYLNYFAPKGHLSYIANIKIES
SIO_010081: LOC105864290
subclass of: SO_0000673
so part of: LOC105864290
location: complement(join(64185..64451,65447..65913,69684..69815,69983..70090,70379..70468,75495..75551,77341..77438,77582..77999,82778..82940,86830..87012,90387..90539,90898..91036,91315..91468,93707..93881,94007..94081,97643..97862,102075..102168,102567..102662,117392..117952,125171..125258,130305..130490,132953..133018,138936..139114,161257..161371))
location: region:64185-161371:-1
so has part: feature:161257-161371:-1:exon
so has part: feature:138936-139114:-1:exon
so has part: feature:132953-133018:-1:exon
so has part: feature:130305-130490:-1:exon
so has part: feature:125171-125258:-1:exon
so has part: feature:117392-117952:-1:exon
so has part: feature:102567-102662:-1:exon
so has part: feature:102075-102168:-1:exon
so has part: feature:97643-97862:-1:exon
so has part: feature:94007-94081:-1:exon
so has part: feature:93707-93881:-1:exon
so has part: feature:91315-91468:-1:exon
so has part: feature:90898-91036:-1:exon
so has part: feature:90387-90539:-1:exon
so has part: feature:86830-87012:-1:exon
so has part: feature:82778-82940:-1:exon
so has part: feature:77582-77999:-1:exon
so has part: feature:77341-77438:-1:exon
so has part: feature:75495-75551:-1:exon
so has part: feature:70379-70468:-1:exon
so has part: feature:69983-70090:-1:exon
so has part: feature:69684-69815:-1:exon
so has part: feature:65447-65913:-1:exon
so has part: feature:64185-64451:-1:exon

XP_020140185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161257-161371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138936-139114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132953-133018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130305-130490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125171-125258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117392-117952:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102567-102662:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102075-102168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97643-97862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94007-94081:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:93707-93881:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91315-91468:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:90898-91036:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:90387-90539:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:86830-87012:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82778-82940:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:77582-77999:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:77341-77438:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:75495-75551:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:70379-70468:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:69983-70090:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:69684-69815:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:65447-65913:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:64185-64451:-1:exon

LOC105864290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 13 isoform X5
translation: MHVSLAEALEVRGGPLEEEEIWAVLNQSAESLQELFRKVSIADPAALGFIISPWSLLLLPSGSVSFTDENISNQDLRAFTAPEVLQNQSLTSLSDVEKIHIYSLGMTLYWGADHEVPQSQPIKLGDHLNSILLGMCEDVIYARVSVRTVLDACSAHIRNSNCAPSFSYVKHLVKLVLGNLPGMDQLPGNSEQRPDRSQAIRDRLRGKGLPTGRSSTSDVLDIHKSPFSHQTFLNKGLSKSMGFLSIRDTQDEEDRFKDILSDNNSGHEDSENTCSPYQFKTSGPEKQVIPGIDVLPKKKIWASSMDLLCTADRDFSPGETGTSRHCHPVTVRTSTTPRKKEARYSDGSIALDIFGPQKMDPVYHTRELPTSTAISSALDRIRERQKKLQVLREAMNVEEPVRRYKTYHSDIFNTSSESPSIISSESDFRQVRRSEASKRFESSSGLPGVDETPSQGQSQRPSRQYETPLEGNLINQEIMLKRQEEEMMQLQARMALRQSRLSLYPGDTIKASMLDITRDPLREIALETAMTQRKLRNFFGPEFVKMTIEPFISLDLPRSILTKKGKNEDNRRKVNIMLLSGQRLELTCDTKTICKDVFDMVVAHIGLVEHHLFALATLKDNEYFFVDPDLKLTKVAPEGWKEEPKKKSKATVNFTLFFRIKFFMDDISLIQHTLTCHQYYLQLRKDILDERMHCDDETSLLLASLALQAEYGDYQPEVHGMSYFRLEHYLPARVMEKLDLSYIKEELPKLHNTYVGASEKETELEFLKVCQRLTEYGVHFHRVHPEKKSQTGILLGVCSKGVLVFEVHNGVRTLVLRFPWRETKKISFSKKKITLQNTSDGIKHAFQTENSKVCQYLLHLCSSQHKFQLQMRTRQSNQDAQDIDVLHKRWSVVSSPEREITLVNLKKDAKYGLGFQIIGGEKMGRLDLGVFISSITPGGPADLDGRLKPGDRLISVNSVSLEGVSHHTAIEILQNAPEDVTLVISQPKEKLSKVPSTPVHLANGMKNYLKKPSYMQDGAIDSSSEDHHWPRSTLRHISEGSFGLSGGLREGSLSSQDSRTESASLSQSQVNGFFASHLGDQTWQESQHVSSSSSVIPKGIEKKRISTDSNQSKAKKPAISDATDCSDHGESDMDEATYSSSQDHQTPKKEPSSSMNTCNKMNFKTFSSSPPKPGDIFEVELTKNDNSLGISVTVLFDKVFKCFLFLISSSLCISIYYLNYFAPKGHLSYIANIKIES
SIO_010081: LOC105864290
subclass of: SO_0000673
so part of: LOC105864290
location: complement(join(64185..64451,65447..65913,69684..69815,69983..70090,70379..70468,82778..82940,86830..87012,90387..90539,90898..91036,91315..91468,93707..93881,94007..94081,97643..97865,102075..102168,102567..102662,117392..117952,125171..125258,130305..130490,132953..133018,138936..139114,161257..161371))
location: region:64185-161371:-1
so has part: feature:161257-161371:-1:exon
so has part: feature:138936-139114:-1:exon
so has part: feature:132953-133018:-1:exon
so has part: feature:130305-130490:-1:exon
so has part: feature:125171-125258:-1:exon
so has part: feature:117392-117952:-1:exon
so has part: feature:102567-102662:-1:exon
so has part: feature:102075-102168:-1:exon
so has part: feature:97643-97865:-1:exon
so has part: feature:94007-94081:-1:exon
so has part: feature:93707-93881:-1:exon
so has part: feature:91315-91468:-1:exon
so has part: feature:90898-91036:-1:exon
so has part: feature:90387-90539:-1:exon
so has part: feature:86830-87012:-1:exon
so has part: feature:82778-82940:-1:exon
so has part: feature:70379-70468:-1:exon
so has part: feature:69983-70090:-1:exon
so has part: feature:69684-69815:-1:exon
so has part: feature:65447-65913:-1:exon
so has part: feature:64185-64451:-1:exon

XP_020140188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161257-161371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138936-139114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132953-133018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130305-130490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125171-125258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117392-117952:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102567-102662:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102075-102168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97643-97865:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94007-94081:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:93707-93881:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91315-91468:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:90898-91036:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:90387-90539:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:86830-87012:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82778-82940:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:70379-70468:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:69983-70090:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:69684-69815:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:65447-65913:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:64185-64451:-1:exon

LOC105864290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 13 isoform X3
translation: MHVSLAEALEVRGGPLEEEEIWAVLNQSAESLQELFRKVSIADPAALGFIISPWSLLLLPSGSVSFTDENISNQDLRAFTAPEVLQNQSLTSLSDVEKIHIYSLGMTLYWGADHEVPQSQPIKLGDHLNSILLGMCEDVIYARVSVRTVLDACSAHIRNSNCAPSFSYVKHLVKLVLGNLPGMDQLPGNSEQRPDRSQAIRDRLRGKGLPTGRSSTSDVLDIHKSPFSHQTFLNKGLSKSMGFLSIRDTQDEEDRFKDILSDNNSGHEDSENTCSPYQFKTSGPEKQVIPGIDVLPKKKIWASSMDLLCTADRDFSPGETGTSRHCHPVTVRTSTTPRKKEARYSDGSIALDIFGPQKMDPVYHTRELPTSTAISSALDRIRERQKKLQVLREAMNVEEPVRRYKTYHSDIFNTSSESPSIISSESDFRQVRRSEASKRFESSSGLPGVDETPSQGQSQRPSRQYETPLEGNLINQEIMLKRQEEEMMQLQARMALRQSRLSLYPGDTIKASMLDITRDPLREIALETAMTQRKLRNFFGPEFVKMTIEPFISLDLPRSILTKKGKNEDNRRKVNIMLLSGQRLELTCDTKTICKDVFDMVVAHIGLVEHHLFALATLKDNEYFFVDPDLKLTKVAPEGWKEEPKKKSKATVNFTLFFRIKFFMDDISLIQHTLTCHQYYLQLRKDILDERMHCDDETSLLLASLALQAEYGDYQPEVHGMSYFRLEHYLPARVMEKLDLSYIKEELPKLHNTYVGASEKETELEFLKVCQRLTEYGVHFHRVHPEKKSQTGILLGVCSKGVLVFEVHNGVRTLVLRFPWRETKKISFSKKKITLQNTSDGIKHAFQTENSKVCQYLLHLCSSQHKFQLQMRTRQSNQDAQDIERASFRSLNLQAESVRGFNMGRAVSTGSLAGSTLNKLAVRPLSVQAEILKRLSCSELSLYQPLQNNSKEKSDKASWEEKPKGMSKSYHDLSQASLYPHRKNAIVNMESPPQSIAELVGKPFHQMGRSDTESLAGFTKLNNSKSVASLNRSPERRKHESDSSSIEDPGQACVLDVLHKRWSVVSSPEREITLVNLKKDAKYGLGFQIIGGEKMGRLDLGVFISSITPGGPADLDGRLKPGDRLISVNSVSLEGVSHHTAIEILQNAPEDVTLVISQPKEKLSKVPSTPVHLANGMKNYLKKPSYMQDGAIDSSSEDHHWPRSTLRHISEGSFGLSGGLREGSLSSQDSRTESASLSQSQVNGFFASHLGDQTWQESQHVSSSSSVIPKGIEKKRISTDSNQSKAKKPAISDATDCSDHGESDMDEATYSSSQDHQTPKKEPSSSMNTCNKMNFKTFSSSPPKPGDIFEVELTKNDNSLGISVTVLFDKVFKCFLFLISSSLCISIYYLNYFAPKGHLSYIANIKIES
SIO_010081: LOC105864290
subclass of: SO_0000673
so part of: LOC105864290
location: complement(join(64185..64451,65447..65913,69684..69815,69983..70090,70379..70468,77341..77438,77582..77999,82778..82940,86830..87012,90387..90539,90898..91036,91315..91468,93707..93881,94007..94081,97643..97865,102075..102168,102567..102662,117392..117952,125171..125258,130305..130490,132953..133018,138936..139114,161257..161371))
location: region:64185-161371:-1
so has part: feature:161257-161371:-1:exon
so has part: feature:138936-139114:-1:exon
so has part: feature:132953-133018:-1:exon
so has part: feature:130305-130490:-1:exon
so has part: feature:125171-125258:-1:exon
so has part: feature:117392-117952:-1:exon
so has part: feature:102567-102662:-1:exon
so has part: feature:102075-102168:-1:exon
so has part: feature:97643-97865:-1:exon
so has part: feature:94007-94081:-1:exon
so has part: feature:93707-93881:-1:exon
so has part: feature:91315-91468:-1:exon
so has part: feature:90898-91036:-1:exon
so has part: feature:90387-90539:-1:exon
so has part: feature:86830-87012:-1:exon
so has part: feature:82778-82940:-1:exon
so has part: feature:77582-77999:-1:exon
so has part: feature:77341-77438:-1:exon
so has part: feature:70379-70468:-1:exon
so has part: feature:69983-70090:-1:exon
so has part: feature:69684-69815:-1:exon
so has part: feature:65447-65913:-1:exon
so has part: feature:64185-64451:-1:exon

XP_020140186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161257-161371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138936-139114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132953-133018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130305-130490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125171-125258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117392-117952:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102567-102662:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102075-102168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97643-97865:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94007-94081:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:93707-93881:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91315-91468:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:90898-91036:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:90387-90539:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:86830-87012:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82778-82940:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:77582-77999:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:77341-77438:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:70379-70468:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:69983-70090:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:69684-69815:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:65447-65913:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:64185-64451:-1:exon

LOC105864290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 13 isoform X1
translation: MHVSLAEALEVRGGPLEEEEIWAVLNQSAESLQELFRKVSIADPAALGFIISPWSLLLLPSGSVSFTDENISNQDLRAFTAPEVLQNQSLTSLSDVEKIHIYSLGMTLYWGADHEVPQSQPIKLGDHLNSILLGMCEDVIYARVSVRTVLDACSAHIRNSNCAPSFSYVKHLVKLVLGNLPGMDQLPGNSEQRPDRSQAIRDRLRGKGLPTGRSSTSDVLDIHKSPFSHQTFLNKGLSKSMGFLSIRDTQDEEDRFKDILSDNNSGHEDSENTCSPYQFKTSGPEKQVIPGIDVLPKKKIWASSMDLLCTADRDFSPGETGTSRHCHPVTVRTSTTPRKKEARYSDGSIALDIFGPQKMDPVYHTRELPTSTAISSALDRIRERQKKLQVLREAMNVEEPVRRYKTYHSDIFNTSSESPSIISSESDFRQVRRSEASKRFESSSGLPGVDETPSQGQSQRPSRQYETPLEGNLINQEIMLKRQEEEMMQLQARMALRQSRLSLYPGDTIKASMLDITRDPLREIALETAMTQRKLRNFFGPEFVKMTIEPFISLDLPRSILTKKGKNEDNRRKVNIMLLSGQRLELTCDTKTICKDVFDMVVAHIGLVEHHLFALATLKDNEYFFVDPDLKLTKVAPEGWKEEPKKKSKATVNFTLFFRIKFFMDDISLIQHTLTCHQYYLQLRKDILDERMHCDDETSLLLASLALQAEYGDYQPEVHGMSYFRLEHYLPARVMEKLDLSYIKEELPKLHNTYVGASEKETELEFLKVCQRLTEYGVHFHRVHPEKKSQTGILLGVCSKGVLVFEVHNGVRTLVLRFPWRETKKISFSKKKITLQNTSDGIKHAFQTENSKVCQYLLHLCSSQHKFQLQMRTRQSNQDAQDIERASFRSLNLQAESVRGFNMGRAVSTGSLAGSTLNKLAVRPLSVQAEILKRLSCSELSLYQPLQNNSKEKSDKASWEEKPKGMSKSYHDLSQASLYPHRKNAIVNMESPPQSIAELVGKPFHQMGRSDTESLAGFTKLNNSKSVASLNRSPERRKHESDSSSIEDPGQACVLGMTIHSSGNASSQVSLKDNDVLHKRWSVVSSPEREITLVNLKKDAKYGLGFQIIGGEKMGRLDLGVFISSITPGGPADLDGRLKPGDRLISVNSVSLEGVSHHTAIEILQNAPEDVTLVISQPKEKLSKVPSTPVHLANGMKNYLKKPSYMQDGAIDSSSEDHHWPRSTLRHISEGSFGLSGGLREGSLSSQDSRTESASLSQSQVNGFFASHLGDQTWQESQHVSSSSSVIPKGIEKKRISTDSNQSKAKKPAISDATDCSDHGESDMDEATYSSSQDHQTPKKEPSSSMNTCNKMNFKTFSSSPPKPGDIFEVELTKNDNSLGISVTVLFDKVFKCFLFLISSSLCISIYYLNYFAPKGHLSYIANIKIES
SIO_010081: LOC105864290
subclass of: SO_0000673
so part of: LOC105864290
location: complement(join(64185..64451,65447..65913,69684..69815,69983..70090,70379..70468,75495..75551,77341..77438,77582..77999,82778..82940,86830..87012,90387..90539,90898..91036,91315..91468,93707..93881,94007..94081,97643..97865,102075..102168,102567..102662,117392..117952,125171..125258,130305..130490,132953..133018,138936..139114,161257..161371))
location: region:64185-161371:-1
so has part: feature:161257-161371:-1:exon
so has part: feature:138936-139114:-1:exon
so has part: feature:132953-133018:-1:exon
so has part: feature:130305-130490:-1:exon
so has part: feature:125171-125258:-1:exon
so has part: feature:117392-117952:-1:exon
so has part: feature:102567-102662:-1:exon
so has part: feature:102075-102168:-1:exon
so has part: feature:97643-97865:-1:exon
so has part: feature:94007-94081:-1:exon
so has part: feature:93707-93881:-1:exon
so has part: feature:91315-91468:-1:exon
so has part: feature:90898-91036:-1:exon
so has part: feature:90387-90539:-1:exon
so has part: feature:86830-87012:-1:exon
so has part: feature:82778-82940:-1:exon
so has part: feature:77582-77999:-1:exon
so has part: feature:77341-77438:-1:exon
so has part: feature:75495-75551:-1:exon
so has part: feature:70379-70468:-1:exon
so has part: feature:69983-70090:-1:exon
so has part: feature:69684-69815:-1:exon
so has part: feature:65447-65913:-1:exon
so has part: feature:64185-64451:-1:exon

XP_020140183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161257-161371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138936-139114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132953-133018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130305-130490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125171-125258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117392-117952:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102567-102662:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102075-102168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97643-97865:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94007-94081:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:93707-93881:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91315-91468:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:90898-91036:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:90387-90539:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:86830-87012:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82778-82940:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:77582-77999:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:77341-77438:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:75495-75551:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:70379-70468:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:69983-70090:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:69684-69815:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:65447-65913:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:64185-64451:-1:exon

LOC105864290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 13 isoform X1
translation: MHVSLAEALEVRGGPLEEEEIWAVLNQSAESLQELFRKVSIADPAALGFIISPWSLLLLPSGSVSFTDENISNQDLRAFTAPEVLQNQSLTSLSDVEKIHIYSLGMTLYWGADHEVPQSQPIKLGDHLNSILLGMCEDVIYARVSVRTVLDACSAHIRNSNCAPSFSYVKHLVKLVLGNLPGMDQLPGNSEQRPDRSQAIRDRLRGKGLPTGRSSTSDVLDIHKSPFSHQTFLNKGLSKSMGFLSIRDTQDEEDRFKDILSDNNSGHEDSENTCSPYQFKTSGPEKQVIPGIDVLPKKKIWASSMDLLCTADRDFSPGETGTSRHCHPVTVRTSTTPRKKEARYSDGSIALDIFGPQKMDPVYHTRELPTSTAISSALDRIRERQKKLQVLREAMNVEEPVRRYKTYHSDIFNTSSESPSIISSESDFRQVRRSEASKRFESSSGLPGVDETPSQGQSQRPSRQYETPLEGNLINQEIMLKRQEEEMMQLQARMALRQSRLSLYPGDTIKASMLDITRDPLREIALETAMTQRKLRNFFGPEFVKMTIEPFISLDLPRSILTKKGKNEDNRRKVNIMLLSGQRLELTCDTKTICKDVFDMVVAHIGLVEHHLFALATLKDNEYFFVDPDLKLTKVAPEGWKEEPKKKSKATVNFTLFFRIKFFMDDISLIQHTLTCHQYYLQLRKDILDERMHCDDETSLLLASLALQAEYGDYQPEVHGMSYFRLEHYLPARVMEKLDLSYIKEELPKLHNTYVGASEKETELEFLKVCQRLTEYGVHFHRVHPEKKSQTGILLGVCSKGVLVFEVHNGVRTLVLRFPWRETKKISFSKKKITLQNTSDGIKHAFQTENSKVCQYLLHLCSSQHKFQLQMRTRQSNQDAQDIERASFRSLNLQAESVRGFNMGRAVSTGSLAGSTLNKLAVRPLSVQAEILKRLSCSELSLYQPLQNNSKEKSDKASWEEKPKGMSKSYHDLSQASLYPHRKNAIVNMESPPQSIAELVGKPFHQMGRSDTESLAGFTKLNNSKSVASLNRSPERRKHESDSSSIEDPGQACVLGMTIHSSGNASSQVSLKDNDVLHKRWSVVSSPEREITLVNLKKDAKYGLGFQIIGGEKMGRLDLGVFISSITPGGPADLDGRLKPGDRLISVNSVSLEGVSHHTAIEILQNAPEDVTLVISQPKEKLSKVPSTPVHLANGMKNYLKKPSYMQDGAIDSSSEDHHWPRSTLRHISEGSFGLSGGLREGSLSSQDSRTESASLSQSQVNGFFASHLGDQTWQESQHVSSSSSVIPKGIEKKRISTDSNQSKAKKPAISDATDCSDHGESDMDEATYSSSQDHQTPKKEPSSSMNTCNKMNFKTFSSSPPKPGDIFEVELTKNDNSLGISVTVLFDKVFKCFLFLISSSLCISIYYLNYFAPKGHLSYIANIKIES
SIO_010081: LOC105864290
subclass of: SO_0000673
so part of: LOC105864290
location: complement(join(64185..64451,65447..65913,69684..69815,69983..70090,70379..70468,75495..75551,77341..77438,77582..77999,82778..82940,86830..87012,90387..90539,90898..91036,91315..91468,93707..93881,94007..94081,97643..97865,102075..102168,102567..102662,117392..117952,125171..125258,130305..130490,132953..133018,138936..139114,161257..161371))
location: region:64185-161371:-1
so has part: feature:161257-161371:-1:exon
so has part: feature:138936-139114:-1:exon
so has part: feature:132953-133018:-1:exon
so has part: feature:130305-130490:-1:exon
so has part: feature:125171-125258:-1:exon
so has part: feature:117392-117952:-1:exon
so has part: feature:102567-102662:-1:exon
so has part: feature:102075-102168:-1:exon
so has part: feature:97643-97865:-1:exon
so has part: feature:94007-94081:-1:exon
so has part: feature:93707-93881:-1:exon
so has part: feature:91315-91468:-1:exon
so has part: feature:90898-91036:-1:exon
so has part: feature:90387-90539:-1:exon
so has part: feature:86830-87012:-1:exon
so has part: feature:82778-82940:-1:exon
so has part: feature:77582-77999:-1:exon
so has part: feature:77341-77438:-1:exon
so has part: feature:75495-75551:-1:exon
so has part: feature:70379-70468:-1:exon
so has part: feature:69983-70090:-1:exon
so has part: feature:69684-69815:-1:exon
so has part: feature:65447-65913:-1:exon
so has part: feature:64185-64451:-1:exon

XP_020140184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161257-161371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138936-139114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132953-133018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130305-130490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125171-125258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117392-117952:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102567-102662:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102075-102168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97643-97865:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94007-94081:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:93707-93881:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91315-91468:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:90898-91036:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:90387-90539:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:86830-87012:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82778-82940:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:77582-77999:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:77341-77438:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:75495-75551:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:70379-70468:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:69983-70090:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:69684-69815:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:65447-65913:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:64185-64451:-1:exon

LOC105864292
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105864292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 197768..242274
location: region:197768-242274:1
so has part: feature:197768-242274:1:exon
subclass of: SO_0000011

105864292
type: Gene
SIO_000068: ncbigene

position:197768:1
position: 197768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242274:1
position: 242274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197768-242274:1:exon

LOC105864292
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105864292
product: uncharacterized LOC105864292, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001150951.1
SIO_010081: LOC105864292
subclass of: SO_0000673
so part of: LOC105864292
location: join(197768..198147,207509..207583,232612..232672,234087..234176,240916..242274)
location: region:197768-242274:1
so has part: feature:197768-198147:1:exon
so has part: feature:207509-207583:1:exon
so has part: feature:232612-232672:1:exon
so has part: feature:234087-234176:1:exon
so has part: feature:240916-242274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197768-198147:1:exon

position:198147:1
position: 198147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:207509-207583:1:exon

position:207509:1
position: 207509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207583:1
position: 207583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:232612-232672:1:exon

position:232612:1
position: 232612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232672:1
position: 232672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234087-234176:1:exon

position:234087:1
position: 234087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234176:1
position: 234176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:240916-242274:1:exon

position:240916:1
position: 240916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105864292
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105864292
product: uncharacterized LOC105864292, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_001150952.1
SIO_010081: LOC105864292
subclass of: SO_0000673
so part of: LOC105864292
location: join(197768..198147,207509..207583,215172..215241)
location: region:197768-215241:1
so has part: feature:197768-198147:1:exon
so has part: feature:207509-207583:1:exon
so has part: feature:215172-215241:1:exon

position:215241:1
position: 215241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197768-198147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207509-207583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215172-215241:1:exon

position:215172:1
position: 215172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105864293
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105864293
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(245932..273084)
location: region:245932-273084:-1
so has part: feature:245932-273084:-1:exon
subclass of: SO_0000011

105864293
type: Gene
SIO_000068: ncbigene

position:245932:-1
position: 245932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273084:-1
position: 273084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245932-273084:-1:exon

LOC105864293
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105864293
product: uncharacterized LOC105864293
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001150953.1
SIO_010081: LOC105864293
subclass of: SO_0000673
so part of: LOC105864293
location: complement(join(245932..246122,247947..248073,273031..273084))
location: region:245932-273084:-1
so has part: feature:273031-273084:-1:exon
so has part: feature:247947-248073:-1:exon
so has part: feature:245932-246122:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273031-273084:-1:exon

position:273031:-1
position: 273031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247947-248073:-1:exon

position:247947:-1
position: 247947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248073:-1
position: 248073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:245932-246122:-1:exon

position:246122:-1
position: 246122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105864294
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105864294
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(291575..299000)
location: region:291575-299000:-1
so has part: feature:291575-299000:-1:exon
subclass of: SO_0000011

105864294
type: Gene
SIO_000068: ncbigene

position:291575:-1
position: 291575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299000:-1
position: 299000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291575-299000:-1:exon

LOC105864294
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105864294
product: uncharacterized LOC105864294
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001150954.1
SIO_010081: LOC105864294
subclass of: SO_0000673
so part of: LOC105864294
location: complement(join(291575..291829,293291..293315,298428..299000))
location: region:291575-299000:-1
so has part: feature:298428-299000:-1:exon
so has part: feature:293291-293315:-1:exon
so has part: feature:291575-291829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:298428-299000:-1:exon

position:298428:-1
position: 298428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:293291-293315:-1:exon

position:293291:-1
position: 293291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293315:-1
position: 293315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:291575-291829:-1:exon

position:291829:-1
position: 291829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105864291
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105864291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 322288..484651
location: region:322288-484651:1
so has part: feature:322288-484651:1:exon
subclass of: SO_0000010

105864291
type: Gene
SIO_000068: ncbigene

position:322288:1
position: 322288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484651:1
position: 484651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322288-484651:1:exon

LOC105864291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864291
product: mitogen-activated protein kinase 10-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012752058.2
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(322288..322851,328283..328396,337371..337468,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484651)
location: region:322288-484651:1
so has part: feature:322288-322851:1:exon
so has part: feature:328283-328396:1:exon
so has part: feature:337371-337468:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:322288-322851:1:exon

position:322851:1
position: 322851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328283-328396:1:exon

position:328283:1
position: 328283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328396:1
position: 328396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337371-337468:1:exon

position:337371:1
position: 337371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337468:1
position: 337468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:430721-430792:1:exon

position:430721:1
position: 430721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430792:1
position: 430792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:444674-444843:1:exon

position:444674:1
position: 444674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444843:1
position: 444843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:474485-474614:1:exon

position:474485:1
position: 474485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474614:1
position: 474614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:479787-479845:1:exon

position:479787:1
position: 479787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479845:1
position: 479845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:480688-480826:1:exon

position:480688:1
position: 480688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480826:1
position: 480826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:481561-481726:1:exon

position:481561:1
position: 481561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481726:1
position: 481726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:484220-484651:1:exon

position:484220:1
position: 484220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105864291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864291
product: mitogen-activated protein kinase 10-like, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 267 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012752068.2
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(322288..322851,328283..328396,430721..430819,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484651)
location: region:322288-484651:1
so has part: feature:322288-322851:1:exon
so has part: feature:328283-328396:1:exon
so has part: feature:430721-430819:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:322288-322851:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328283-328396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430721-430819:1:exon

position:430819:1
position: 430819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:484220-484651:1:exon

LOC105864291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864291
product: mitogen-activated protein kinase 10-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 295 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012752063.2
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(322288..322851,328283..328396,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484651)
location: region:322288-484651:1
so has part: feature:322288-322851:1:exon
so has part: feature:328283-328396:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:322288-322851:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328283-328396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430721-430792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:484220-484651:1:exon

LOC105864291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864291
product: mitogen-activated protein kinase 10-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012752061.2
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(324030..324346,328283..328396,337371..337468,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484651)
location: region:324030-484651:1
so has part: feature:324030-324346:1:exon
so has part: feature:328283-328396:1:exon
so has part: feature:337371-337468:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484651:1:exon

position:324030:1
position: 324030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324030-324346:1:exon

position:324346:1
position: 324346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328283-328396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337371-337468:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430721-430792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:484220-484651:1:exon

LOC105864291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864291
product: mitogen-activated protein kinase 10-like, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012752067.2
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(324033..324346,328283..328396,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484651)
location: region:324033-484651:1
so has part: feature:324033-324346:1:exon
so has part: feature:328283-328396:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484651:1:exon

position:324033:1
position: 324033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324033-324346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328283-328396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430721-430792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:484220-484651:1:exon

LOC105864291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864291
product: mitogen-activated protein kinase 10-like, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012752071.2
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(324038..324346,328283..328396,430721..430819,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484651)
location: region:324038-484651:1
so has part: feature:324038-324346:1:exon
so has part: feature:328283-328396:1:exon
so has part: feature:430721-430819:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484651:1:exon

position:324038:1
position: 324038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324038-324346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328283-328396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430721-430819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:484220-484651:1:exon

LOC105864291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864291
product: mitogen-activated protein kinase 10-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012752059.2
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(324369..324473,328283..328396,337371..337468,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484651)
location: region:324369-484651:1
so has part: feature:324369-324473:1:exon
so has part: feature:328283-328396:1:exon
so has part: feature:337371-337468:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484651:1:exon

position:324369:1
position: 324369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324369-324473:1:exon

position:324473:1
position: 324473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328283-328396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337371-337468:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430721-430792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:484220-484651:1:exon

LOC105864291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864291
product: mitogen-activated protein kinase 10-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012752064.2
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(324369..324473,328283..328396,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484651)
location: region:324369-484651:1
so has part: feature:324369-324473:1:exon
so has part: feature:328283-328396:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324369-324473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328283-328396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430721-430792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:484220-484651:1:exon

LOC105864291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864291
product: mitogen-activated protein kinase 10-like, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012752069.2
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(324370..324473,328283..328396,430721..430819,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484651)
location: region:324370-484651:1
so has part: feature:324370-324473:1:exon
so has part: feature:328283-328396:1:exon
so has part: feature:430721-430819:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484651:1:exon

position:324370:1
position: 324370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324370-324473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328283-328396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430721-430819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:484220-484651:1:exon

LOC105864291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864291
product: mitogen-activated protein kinase 10-like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012752066.2
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(324670..324916,328283..328396,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484651)
location: region:324670-484651:1
so has part: feature:324670-324916:1:exon
so has part: feature:328283-328396:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484651:1:exon

position:324670:1
position: 324670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324670-324916:1:exon

position:324916:1
position: 324916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328283-328396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430721-430792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:484220-484651:1:exon

LOC105864291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864291
product: mitogen-activated protein kinase 10-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012752060.2
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(324732..324916,328283..328396,337371..337468,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484651)
location: region:324732-484651:1
so has part: feature:324732-324916:1:exon
so has part: feature:328283-328396:1:exon
so has part: feature:337371-337468:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484651:1:exon

position:324732:1
position: 324732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324732-324916:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328283-328396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337371-337468:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430721-430792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:484220-484651:1:exon

LOC105864291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864291
product: mitogen-activated protein kinase 10-like, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012752070.2
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(324744..324916,328283..328396,430721..430819,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484651)
location: region:324744-484651:1
so has part: feature:324744-324916:1:exon
so has part: feature:328283-328396:1:exon
so has part: feature:430721-430819:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484651:1:exon

position:324744:1
position: 324744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324744-324916:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328283-328396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430721-430819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:484220-484651:1:exon

LOC105864291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10-like isoform X2
translation: MSHYSPKQSVVFMSLHFLYYCSEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDCILVPFATALPVLFSLPLNT
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(337439..337468,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484353)
location: region:337439-484353:1
so has part: feature:337439-337468:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484353:1:exon

XP_012607512.1
type: Protein
SIO_000068: ncbiprotein

position:337439:1
position: 337439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484353:1
position: 484353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337439-337468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430721-430792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484220-484353:1:exon

LOC105864291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10-like isoform X2
translation: MSHYSPKQSVVFMSLHFLYYCSEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDCILVPFATALPVLFSLPLNT
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(337439..337468,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484353)
location: region:337439-484353:1
so has part: feature:337439-337468:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484353:1:exon

XP_012607513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337439-337468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430721-430792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484220-484353:1:exon

LOC105864291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10-like isoform X2
translation: MSHYSPKQSVVFMSLHFLYYCSEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDCILVPFATALPVLFSLPLNT
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(337439..337468,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484353)
location: region:337439-484353:1
so has part: feature:337439-337468:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484353:1:exon

XP_012607514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337439-337468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430721-430792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484220-484353:1:exon

LOC105864291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10-like isoform X2
translation: MSHYSPKQSVVFMSLHFLYYCSEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDCILVPFATALPVLFSLPLNT
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(337439..337468,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484353)
location: region:337439-484353:1
so has part: feature:337439-337468:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484353:1:exon

XP_012607515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337439-337468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430721-430792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484220-484353:1:exon

LOC105864291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864291
product: mitogen-activated protein kinase 10-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012752062.2
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(377525..381158,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,483540..484213)
location: region:377525-484213:1
so has part: feature:377525-381158:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:483540-484213:1:exon

position:377525:1
position: 377525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484213:1
position: 484213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377525-381158:1:exon

position:381158:1
position: 381158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:430721-430792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:483540-484213:1:exon

position:483540:1
position: 483540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105864291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864291
product: mitogen-activated protein kinase 10-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012752057.2
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(378573..381158,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484651)
location: region:378573-484651:1
so has part: feature:378573-381158:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484651:1:exon

position:378573:1
position: 378573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378573-381158:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430721-430792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484220-484651:1:exon

LOC105864291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10-like isoform X1
translation: MSLKPQETHFWDAELARGYVFMSLHFLYYCSEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDCILVPFATALPVLFSLPLNT
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(381102..381158,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484353)
location: region:381102-484353:1
so has part: feature:381102-381158:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484353:1:exon

XP_012607511.1
type: Protein
SIO_000068: ncbiprotein

position:381102:1
position: 381102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381102-381158:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430721-430792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484220-484353:1:exon

LOC105864291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10-like isoform X3
translation: MSLKPQETHFWDAELARGYVFMSLHFLYYCSEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENDDIFMRVLIHHISFFLEIFRIETKTDVYLQR
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(381102..381158,430721..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,483540..483634)
location: region:381102-483634:1
so has part: feature:381102-381158:1:exon
so has part: feature:430721-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:483540-483634:1:exon

XP_012607516.1
type: Protein
SIO_000068: ncbiprotein

position:483634:1
position: 483634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381102-381158:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430721-430792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:483540-483634:1:exon

LOC105864291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10-like isoform X4
translation: MSLHFLYYCSEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDCILVPFATALPVLFSLPLNT
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(430727..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484353)
location: region:430727-484353:1
so has part: feature:430727-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484353:1:exon

XP_012607517.1
type: Protein
SIO_000068: ncbiprotein

position:430727:1
position: 430727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430727-430792:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:484220-484353:1:exon

LOC105864291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10-like isoform X4
translation: MSLHFLYYCSEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDCILVPFATALPVLFSLPLNT
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(430727..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484353)
location: region:430727-484353:1
so has part: feature:430727-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484353:1:exon

XP_012607518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430727-430792:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:484220-484353:1:exon

LOC105864291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10-like isoform X4
translation: MSLHFLYYCSEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDCILVPFATALPVLFSLPLNT
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(430727..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484353)
location: region:430727-484353:1
so has part: feature:430727-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484353:1:exon

XP_012607520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430727-430792:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:484220-484353:1:exon

LOC105864291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10-like isoform X4
translation: MSLHFLYYCSEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDCILVPFATALPVLFSLPLNT
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(430727..430792,444674..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484353)
location: region:430727-484353:1
so has part: feature:430727-430792:1:exon
so has part: feature:444674-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484353:1:exon

XP_012607521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430727-430792:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:444674-444843:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:484220-484353:1:exon

LOC105864291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10-like isoform X5
translation: MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDCILVPFATALPVLFSLPLNT
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(444722..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484353)
location: region:444722-484353:1
so has part: feature:444722-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484353:1:exon

XP_012607522.1
type: Protein
SIO_000068: ncbiprotein

position:444722:1
position: 444722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444722-444843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484220-484353:1:exon

LOC105864291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10-like isoform X5
translation: MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDCILVPFATALPVLFSLPLNT
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(444722..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484353)
location: region:444722-484353:1
so has part: feature:444722-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484353:1:exon

XP_012607523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444722-444843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484220-484353:1:exon

LOC105864291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10-like isoform X5
translation: MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDCILVPFATALPVLFSLPLNT
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(444722..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484353)
location: region:444722-484353:1
so has part: feature:444722-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484353:1:exon

XP_012607524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444722-444843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484220-484353:1:exon

LOC105864291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10-like isoform X5
translation: MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDCILVPFATALPVLFSLPLNT
SIO_010081: LOC105864291
subclass of: SO_0000673
so part of: LOC105864291
location: join(444722..444843,474485..474614,479787..479845,480688..480826,481561..481726,484220..484353)
location: region:444722-484353:1
so has part: feature:444722-444843:1:exon
so has part: feature:474485-474614:1:exon
so has part: feature:479787-479845:1:exon
so has part: feature:480688-480826:1:exon
so has part: feature:481561-481726:1:exon
so has part: feature:484220-484353:1:exon

XP_012607525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444722-444843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:474485-474614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479787-479845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480688-480826:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481561-481726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484220-484353:1:exon

MAPK10
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: MAPK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 487842..547714
location: region:487842-547714:1
so has part: feature:487842-547714:1:exon
subclass of: SO_0000010

105874790
type: Gene
SIO_000068: ncbigene

position:487842:1
position: 487842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547714:1
position: 547714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487842-547714:1:exon

MAPK10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAPK10
product: mitogen-activated protein kinase 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012770924.2
SIO_010081: MAPK10
subclass of: SO_0000673
so part of: MAPK10
location: join(487842..489323,490167..490305,491040..491205,502562..502633,512138..512320,513856..513980,531168..531231,532796..532873,541819..541957,544446..544913)
location: region:487842-544913:1
so has part: feature:487842-489323:1:exon
so has part: feature:490167-490305:1:exon
so has part: feature:491040-491205:1:exon
so has part: feature:502562-502633:1:exon
so has part: feature:512138-512320:1:exon
so has part: feature:513856-513980:1:exon
so has part: feature:531168-531231:1:exon
so has part: feature:532796-532873:1:exon
so has part: feature:541819-541957:1:exon
so has part: feature:544446-544913:1:exon

position:544913:1
position: 544913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487842-489323:1:exon

position:489323:1
position: 489323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:490167-490305:1:exon

position:490167:1
position: 490167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490305:1
position: 490305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:491040-491205:1:exon

position:491040:1
position: 491040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491205:1
position: 491205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:502562-502633:1:exon

position:502562:1
position: 502562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502633:1
position: 502633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:512138-512320:1:exon

position:512138:1
position: 512138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512320:1
position: 512320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:513856-513980:1:exon

position:513856:1
position: 513856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513980:1
position: 513980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:531168-531231:1:exon

position:531168:1
position: 531168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531231:1
position: 531231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:532796-532873:1:exon

position:532796:1
position: 532796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532873:1
position: 532873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:541819-541957:1:exon

position:541819:1
position: 541819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541957:1
position: 541957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:544446-544913:1:exon

position:544446:1
position: 544446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAPK10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAPK10
product: mitogen-activated protein kinase 10, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020284603.1
SIO_010081: MAPK10
subclass of: SO_0000673
so part of: MAPK10
location: join(487844..489323,490167..490305,491040..491205,502562..502633,512138..512320,513856..513980,531168..531231,532796..532873,541819..542705)
location: region:487844-542705:1
so has part: feature:487844-489323:1:exon
so has part: feature:490167-490305:1:exon
so has part: feature:491040-491205:1:exon
so has part: feature:502562-502633:1:exon
so has part: feature:512138-512320:1:exon
so has part: feature:513856-513980:1:exon
so has part: feature:531168-531231:1:exon
so has part: feature:532796-532873:1:exon
so has part: feature:541819-542705:1:exon

position:487844:1
position: 487844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542705:1
position: 542705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487844-489323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490167-490305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491040-491205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502562-502633:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512138-512320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513856-513980:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531168-531231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:532796-532873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541819-542705:1:exon

MAPK10
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: MAPK10
product: mitogen-activated protein kinase 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001155659.2
SIO_010081: MAPK10
so part of: MAPK10
location: join(487845..489323,490167..490305,491040..491205,493697..493768,512138..512320,513856..513980,531168..531231,532796..532873,541819..541957,544446..544772,547567..547714)
location: region:487845-547714:1
so has part: feature:487845-489323:1:exon
so has part: feature:490167-490305:1:exon
so has part: feature:491040-491205:1:exon
so has part: feature:493697-493768:1:exon
so has part: feature:512138-512320:1:exon
so has part: feature:513856-513980:1:exon
so has part: feature:531168-531231:1:exon
so has part: feature:532796-532873:1:exon
so has part: feature:541819-541957:1:exon
so has part: feature:544446-544772:1:exon
so has part: feature:547567-547714:1:exon

position:487845:1
position: 487845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487845-489323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490167-490305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491040-491205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:493697-493768:1:exon

position:493697:1
position: 493697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493768:1
position: 493768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:512138-512320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513856-513980:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531168-531231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:532796-532873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541819-541957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:544446-544772:1:exon

position:544772:1
position: 544772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:547567-547714:1:exon

position:547567:1
position: 547567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAPK10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAPK10
product: mitogen-activated protein kinase 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012770923.2
SIO_010081: MAPK10
subclass of: SO_0000673
so part of: MAPK10
location: join(487845..489323,490167..490305,491040..491205,493697..493768,512138..512320,513856..513980,531168..531231,532796..532873,541819..541957,544446..544912)
location: region:487845-544912:1
so has part: feature:487845-489323:1:exon
so has part: feature:490167-490305:1:exon
so has part: feature:491040-491205:1:exon
so has part: feature:493697-493768:1:exon
so has part: feature:512138-512320:1:exon
so has part: feature:513856-513980:1:exon
so has part: feature:531168-531231:1:exon
so has part: feature:532796-532873:1:exon
so has part: feature:541819-541957:1:exon
so has part: feature:544446-544912:1:exon

position:544912:1
position: 544912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487845-489323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490167-490305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491040-491205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:493697-493768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512138-512320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513856-513980:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531168-531231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:532796-532873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541819-541957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:544446-544912:1:exon

MAPK10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAPK10
product: mitogen-activated protein kinase 10, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_012770925.2
SIO_010081: MAPK10
subclass of: SO_0000673
so part of: MAPK10
location: join(487847..489323,490167..490305,491040..491205,493697..493768,512138..512320,513856..513980,531168..531231,532796..532873,541814..542711)
location: region:487847-542711:1
so has part: feature:487847-489323:1:exon
so has part: feature:490167-490305:1:exon
so has part: feature:491040-491205:1:exon
so has part: feature:493697-493768:1:exon
so has part: feature:512138-512320:1:exon
so has part: feature:513856-513980:1:exon
so has part: feature:531168-531231:1:exon
so has part: feature:532796-532873:1:exon
so has part: feature:541814-542711:1:exon

position:487847:1
position: 487847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542711:1
position: 542711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487847-489323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490167-490305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491040-491205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:493697-493768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512138-512320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513856-513980:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531168-531231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:532796-532873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541814-542711:1:exon

position:541814:1
position: 541814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAPK10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MAPK10
product: mitogen-activated protein kinase 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 105 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_020284602.1
SIO_010081: MAPK10
subclass of: SO_0000673
so part of: MAPK10
location: join(487848..489323,490167..490305,491040..491205,493697..493768,512138..512320,513856..513980,531168..531231,532796..532873,541819..542705)
location: region:487848-542705:1
so has part: feature:487848-489323:1:exon
so has part: feature:490167-490305:1:exon
so has part: feature:491040-491205:1:exon
so has part: feature:493697-493768:1:exon
so has part: feature:512138-512320:1:exon
so has part: feature:513856-513980:1:exon
so has part: feature:531168-531231:1:exon
so has part: feature:532796-532873:1:exon
so has part: feature:541819-542705:1:exon

position:487848:1
position: 487848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487848-489323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490167-490305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491040-491205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:493697-493768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512138-512320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513856-513980:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531168-531231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:532796-532873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541819-542705:1:exon

MAPK10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAPK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10 isoform X1
translation: MFKYTFKIIHSLSFSFSISTVLSTLSLFQIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMNSEEKTKNGVLKGQPSPSGAAVNSSESLPPSSSVNDISSMSTDQTLASDTDSSLEASAGPLGCCRLNQARTRQCPSPATAAFLKLS
SIO_010081: MAPK10
subclass of: SO_0000673
so part of: MAPK10
location: join(489178..489323,490167..490305,491040..491205,493697..493768,512138..512320,513856..513980,531168..531231,532796..532873,541819..541957,544446..544512)
location: region:489178-544512:1
so has part: feature:489178-489323:1:exon
so has part: feature:490167-490305:1:exon
so has part: feature:491040-491205:1:exon
so has part: feature:493697-493768:1:exon
so has part: feature:512138-512320:1:exon
so has part: feature:513856-513980:1:exon
so has part: feature:531168-531231:1:exon
so has part: feature:532796-532873:1:exon
so has part: feature:541819-541957:1:exon
so has part: feature:544446-544512:1:exon

XP_012626377.1
type: Protein
SIO_000068: ncbiprotein

position:489178:1
position: 489178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544512:1
position: 544512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489178-489323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490167-490305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491040-491205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:493697-493768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512138-512320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513856-513980:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531168-531231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:532796-532873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541819-541957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:544446-544512:1:exon

MAPK10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAPK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10 isoform X2
translation: MFKYTFKIIHSLSFSFSISTVLSTLSLFQIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDMWSVGCIMGEMIKGAVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMNSEEKTKNGVLKGQPSPSGAAVNSSESLPPSSSVNDISSMSTDQTLASDTDSSLEASAGPLGCCRLNQARTRQCPSPATAAFLKLS
SIO_010081: MAPK10
subclass of: SO_0000673
so part of: MAPK10
location: join(489178..489323,490167..490305,491040..491205,502562..502633,512138..512320,513856..513980,531168..531231,532796..532873,541819..541957,544446..544512)
location: region:489178-544512:1
so has part: feature:489178-489323:1:exon
so has part: feature:490167-490305:1:exon
so has part: feature:491040-491205:1:exon
so has part: feature:502562-502633:1:exon
so has part: feature:512138-512320:1:exon
so has part: feature:513856-513980:1:exon
so has part: feature:531168-531231:1:exon
so has part: feature:532796-532873:1:exon
so has part: feature:541819-541957:1:exon
so has part: feature:544446-544512:1:exon

XP_012626378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489178-489323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490167-490305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491040-491205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502562-502633:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512138-512320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513856-513980:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531168-531231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:532796-532873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541819-541957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:544446-544512:1:exon

MAPK10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAPK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10 isoform X3
translation: MFKYTFKIIHSLSFSFSISTVLSTLSLFQIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMNSEEKTKNGVLKGQPSPSGAAVNSSESLPPSSSVNDISSMSTDQTLASDTDSSLEASAGPLGCCR
SIO_010081: MAPK10
subclass of: SO_0000673
so part of: MAPK10
location: join(489178..489323,490167..490305,491040..491205,493697..493768,512138..512320,513856..513980,531168..531231,532796..532873,541819..541961)
location: region:489178-541961:1
so has part: feature:489178-489323:1:exon
so has part: feature:490167-490305:1:exon
so has part: feature:491040-491205:1:exon
so has part: feature:493697-493768:1:exon
so has part: feature:512138-512320:1:exon
so has part: feature:513856-513980:1:exon
so has part: feature:531168-531231:1:exon
so has part: feature:532796-532873:1:exon
so has part: feature:541819-541961:1:exon

XP_020140191.1
type: Protein
SIO_000068: ncbiprotein

position:541961:1
position: 541961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489178-489323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490167-490305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491040-491205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:493697-493768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512138-512320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513856-513980:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531168-531231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:532796-532873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541819-541961:1:exon

MAPK10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAPK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10 isoform X4
translation: MFKYTFKIIHSLSFSFSISTVLSTLSLFQIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDMWSVGCIMGEMIKGAVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMNSEEKTKNGVLKGQPSPSGAAVNSSESLPPSSSVNDISSMSTDQTLASDTDSSLEASAGPLGCCR
SIO_010081: MAPK10
subclass of: SO_0000673
so part of: MAPK10
location: join(489178..489323,490167..490305,491040..491205,502562..502633,512138..512320,513856..513980,531168..531231,532796..532873,541819..541961)
location: region:489178-541961:1
so has part: feature:489178-489323:1:exon
so has part: feature:490167-490305:1:exon
so has part: feature:491040-491205:1:exon
so has part: feature:502562-502633:1:exon
so has part: feature:512138-512320:1:exon
so has part: feature:513856-513980:1:exon
so has part: feature:531168-531231:1:exon
so has part: feature:532796-532873:1:exon
so has part: feature:541819-541961:1:exon

XP_020140192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489178-489323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490167-490305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491040-491205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502562-502633:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512138-512320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513856-513980:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531168-531231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:532796-532873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541819-541961:1:exon

MAPK10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MAPK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 10 isoform X5
translation: MFKYTFKIIHSLSFSFSISTVLSTLSLFQIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMNSEEKTKNGVLKGQPSPSAQVQQ
SIO_010081: MAPK10
subclass of: SO_0000673
so part of: MAPK10
location: join(489178..489323,490167..490305,491040..491205,493697..493768,512138..512320,513856..513980,531168..531231,532796..532873,541814..541830)
location: region:489178-541830:1
so has part: feature:489178-489323:1:exon
so has part: feature:490167-490305:1:exon
so has part: feature:491040-491205:1:exon
so has part: feature:493697-493768:1:exon
so has part: feature:512138-512320:1:exon
so has part: feature:513856-513980:1:exon
so has part: feature:531168-531231:1:exon
so has part: feature:532796-532873:1:exon
so has part: feature:541814-541830:1:exon

XP_012626379.1
type: Protein
SIO_000068: ncbiprotein

position:541830:1
position: 541830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489178-489323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490167-490305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491040-491205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:493697-493768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512138-512320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513856-513980:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531168-531231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:532796-532873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541814-541830:1:exon

ARHGAP24
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: ARHGAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(552483..1097522)
location: region:552483-1097522:-1
so has part: feature:552483-1097522:-1:exon
subclass of: SO_0000010

105874789
type: Gene
SIO_000068: ncbigene

position:552483:-1
position: 552483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097522:-1
position: 1097522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552483-1097522:-1:exon

ARHGAP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARHGAP24
product: Rho GTPase activating protein 24, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012770910.2
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(552483..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636500,787196..787283,857689..857888,1097310..1097522))
location: region:552483-1097522:-1
so has part: feature:1097310-1097522:-1:exon
so has part: feature:857689-857888:-1:exon
so has part: feature:787196-787283:-1:exon
so has part: feature:636378-636500:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:552483-554138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1097310-1097522:-1:exon

position:1097310:-1
position: 1097310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:857689-857888:-1:exon

position:857689:-1
position: 857689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857888:-1
position: 857888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:787196-787283:-1:exon

position:787196:-1
position: 787196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787283:-1
position: 787283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:636378-636500:-1:exon

position:636378:-1
position: 636378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636500:-1
position: 636500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:609101-609308:-1:exon

position:609101:-1
position: 609101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609308:-1
position: 609308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:570472-570604:-1:exon

position:570472:-1
position: 570472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570604:-1
position: 570604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:567751-567824:-1:exon

position:567751:-1
position: 567751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567824:-1
position: 567824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:565914-566035:-1:exon

position:565914:-1
position: 565914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566035:-1
position: 566035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:558315-559374:-1:exon

position:558315:-1
position: 558315
reference: sequence
type: ReverseStrandPosition
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position:559374:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:552483-554138:-1:exon

position:554138:-1
position: 554138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARHGAP24
product: Rho GTPase activating protein 24, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012770913.1
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(552483..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636500,787196..787283,857689..857888,891490..891577,920751..921094))
location: region:552483-921094:-1
so has part: feature:920751-921094:-1:exon
so has part: feature:891490-891577:-1:exon
so has part: feature:857689-857888:-1:exon
so has part: feature:787196-787283:-1:exon
so has part: feature:636378-636500:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:552483-554138:-1:exon

position:921094:-1
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reference: sequence
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urn:…
SIO_000300: 1
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reference: sequence
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urn:…
SIO_000300: 2
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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:857689-857888:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:552483-554138:-1:exon

ARHGAP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARHGAP24
product: Rho GTPase activating protein 24, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012770911.1
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(552483..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636500,787196..787283,857689..857888,920751..920828))
location: region:552483-920828:-1
so has part: feature:920751-920828:-1:exon
so has part: feature:857689-857888:-1:exon
so has part: feature:787196-787283:-1:exon
so has part: feature:636378-636500:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:552483-554138:-1:exon

position:920828:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:920751-920828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857689-857888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:787196-787283:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636378-636500:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 6
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SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552483-554138:-1:exon

ARHGAP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARHGAP24
product: Rho GTPase activating protein 24, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012770912.1
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(552483..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636500,787196..787283,857689..857888,861257..861268))
location: region:552483-861268:-1
so has part: feature:861257-861268:-1:exon
so has part: feature:857689-857888:-1:exon
so has part: feature:787196-787283:-1:exon
so has part: feature:636378-636500:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:552483-554138:-1:exon

position:861268:-1
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reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:861257-861268:-1:exon

position:861257:-1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:857689-857888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:787196-787283:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636378-636500:-1:exon

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SIO_000300: 5
SIO_000628: feature:609101-609308:-1:exon

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SIO_000300: 6
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:552483-554138:-1:exon

ARHGAP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARHGAP24
product: Rho GTPase activating protein 24, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012770919.2
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(552483..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636500,733754..734756))
location: region:552483-734756:-1
so has part: feature:733754-734756:-1:exon
so has part: feature:636378-636500:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:552483-554138:-1:exon

position:734756:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:733754-734756:-1:exon

position:733754:-1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:636378-636500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:552483-554138:-1:exon

ARHGAP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARHGAP24
product: Rho GTPase activating protein 24, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012770915.2
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(552483..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636500,733725..734756))
location: region:552483-734756:-1
so has part: feature:733725-734756:-1:exon
so has part: feature:636378-636500:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:552483-554138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:733725-734756:-1:exon

position:733725:-1
position: 733725
reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:636378-636500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:552483-554138:-1:exon

ARHGAP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARHGAP24
product: Rho GTPase activating protein 24, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012770916.1
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(552483..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636500,698555..699569))
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so has part: feature:698555-699569:-1:exon
so has part: feature:636378-636500:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:552483-554138:-1:exon

position:699569:-1
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reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:698555-699569:-1:exon

position:698555:-1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:636378-636500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:552483-554138:-1:exon

ARHGAP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARHGAP24
product: Rho GTPase activating protein 24, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012770920.2
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(552483..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636500,696963..697243))
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so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:552483-554138:-1:exon

position:697243:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:696963-697243:-1:exon

position:696963:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:636378-636500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570472-570604:-1:exon

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SIO_000300: 5
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SIO_000300: 6
SIO_000628: feature:565914-566035:-1:exon

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SIO_000300: 7
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:552483-554138:-1:exon

ARHGAP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARHGAP24
product: Rho GTPase activating protein 24, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012770921.2
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(552483..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636500,669903..670405))
location: region:552483-670405:-1
so has part: feature:669903-670405:-1:exon
so has part: feature:636378-636500:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:552483-554138:-1:exon

position:670405:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669903-670405:-1:exon

position:669903:-1
position: 669903
reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:636378-636500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:552483-554138:-1:exon

ARHGAP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARHGAP24
product: Rho GTPase activating protein 24, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012770922.1
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(552483..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636500,664525..668929))
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so has part: feature:664525-668929:-1:exon
so has part: feature:636378-636500:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:552483-554138:-1:exon

position:668929:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:664525-668929:-1:exon

position:664525:-1
position: 664525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:636378-636500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:552483-554138:-1:exon

ARHGAP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARHGAP24
product: Rho GTPase activating protein 24, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 57 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012770914.2
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(552483..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,621694..622630))
location: region:552483-622630:-1
so has part: feature:621694-622630:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:552483-554138:-1:exon

position:622630:-1
position: 622630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621694-622630:-1:exon

position:621694:-1
position: 621694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552483-554138:-1:exon

ARHGAP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARHGAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 24 isoform X1
translation: MEENNDSTENPPQSQGRQNAIKCGWLRKQGGFVKTWHTRWFVLKGDQLCYFKDEDETKPLGTIFLPGNKVLEHPCNEENPGKFLFEVVAGGDRDRMTANHESYLLMASTQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVEDPLTIMEGTVVVRQLMSVMISGHERLFPKDAEPQSNNNDDAARKAGVGQAQNKENNNTTDGPGRRCSWDRPESPQRGGLDNGPAAAAPGSKGSSPRSSAHQPDACRSPPLTVKKNPAFSKGSGIVTNGSFSSSSAAEGLERTQATPNGSLQARRTSSLKGPGTKMGTHSVQNGASRAGALAADALGSPAGGRGLGWLPNGCVTLRDSRPKEQAGESGQHHRLSTYDNVHQQFCTPSLDDKQSVDSATWSTSSCEISLPDNSNSCRSSTTTCPEQDFYGGSFEDPLLDGPPQDEPARAGDCEGRAERRSVGGRSSRATSSSDNSETFVGTAAGSHSALHSLVSSLKQEMTKQKVEYESRIKSLEQRNLTLETEMMSLHDELDQERKKFTMIEIKMRNAERAKEDAEKRNDMLQKEMEQFFSTFGELTVEPRRTERGNTIWIQ
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(553895..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636500,787196..787283,857689..857868))
location: region:553895-857868:-1
so has part: feature:857689-857868:-1:exon
so has part: feature:787196-787283:-1:exon
so has part: feature:636378-636500:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:553895-554138:-1:exon

XP_012626364.1
type: Protein
SIO_000068: ncbiprotein

position:553895:-1
position: 553895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857868:-1
position: 857868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857689-857868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:787196-787283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:636378-636500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553895-554138:-1:exon

ARHGAP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARHGAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 24 isoform X1
translation: MEENNDSTENPPQSQGRQNAIKCGWLRKQGGFVKTWHTRWFVLKGDQLCYFKDEDETKPLGTIFLPGNKVLEHPCNEENPGKFLFEVVAGGDRDRMTANHESYLLMASTQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVEDPLTIMEGTVVVRQLMSVMISGHERLFPKDAEPQSNNNDDAARKAGVGQAQNKENNNTTDGPGRRCSWDRPESPQRGGLDNGPAAAAPGSKGSSPRSSAHQPDACRSPPLTVKKNPAFSKGSGIVTNGSFSSSSAAEGLERTQATPNGSLQARRTSSLKGPGTKMGTHSVQNGASRAGALAADALGSPAGGRGLGWLPNGCVTLRDSRPKEQAGESGQHHRLSTYDNVHQQFCTPSLDDKQSVDSATWSTSSCEISLPDNSNSCRSSTTTCPEQDFYGGSFEDPLLDGPPQDEPARAGDCEGRAERRSVGGRSSRATSSSDNSETFVGTAAGSHSALHSLVSSLKQEMTKQKVEYESRIKSLEQRNLTLETEMMSLHDELDQERKKFTMIEIKMRNAERAKEDAEKRNDMLQKEMEQFFSTFGELTVEPRRTERGNTIWIQ
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(553895..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636500,787196..787283,857689..857868))
location: region:553895-857868:-1
so has part: feature:857689-857868:-1:exon
so has part: feature:787196-787283:-1:exon
so has part: feature:636378-636500:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:553895-554138:-1:exon

XP_012626365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:857689-857868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:787196-787283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:636378-636500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553895-554138:-1:exon

ARHGAP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARHGAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 24 isoform X1
translation: MEENNDSTENPPQSQGRQNAIKCGWLRKQGGFVKTWHTRWFVLKGDQLCYFKDEDETKPLGTIFLPGNKVLEHPCNEENPGKFLFEVVAGGDRDRMTANHESYLLMASTQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVEDPLTIMEGTVVVRQLMSVMISGHERLFPKDAEPQSNNNDDAARKAGVGQAQNKENNNTTDGPGRRCSWDRPESPQRGGLDNGPAAAAPGSKGSSPRSSAHQPDACRSPPLTVKKNPAFSKGSGIVTNGSFSSSSAAEGLERTQATPNGSLQARRTSSLKGPGTKMGTHSVQNGASRAGALAADALGSPAGGRGLGWLPNGCVTLRDSRPKEQAGESGQHHRLSTYDNVHQQFCTPSLDDKQSVDSATWSTSSCEISLPDNSNSCRSSTTTCPEQDFYGGSFEDPLLDGPPQDEPARAGDCEGRAERRSVGGRSSRATSSSDNSETFVGTAAGSHSALHSLVSSLKQEMTKQKVEYESRIKSLEQRNLTLETEMMSLHDELDQERKKFTMIEIKMRNAERAKEDAEKRNDMLQKEMEQFFSTFGELTVEPRRTERGNTIWIQ
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(553895..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636500,787196..787283,857689..857868))
location: region:553895-857868:-1
so has part: feature:857689-857868:-1:exon
so has part: feature:787196-787283:-1:exon
so has part: feature:636378-636500:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:553895-554138:-1:exon

XP_012626366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:857689-857868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:787196-787283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:636378-636500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553895-554138:-1:exon

ARHGAP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARHGAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 24 isoform X1
translation: MEENNDSTENPPQSQGRQNAIKCGWLRKQGGFVKTWHTRWFVLKGDQLCYFKDEDETKPLGTIFLPGNKVLEHPCNEENPGKFLFEVVAGGDRDRMTANHESYLLMASTQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVEDPLTIMEGTVVVRQLMSVMISGHERLFPKDAEPQSNNNDDAARKAGVGQAQNKENNNTTDGPGRRCSWDRPESPQRGGLDNGPAAAAPGSKGSSPRSSAHQPDACRSPPLTVKKNPAFSKGSGIVTNGSFSSSSAAEGLERTQATPNGSLQARRTSSLKGPGTKMGTHSVQNGASRAGALAADALGSPAGGRGLGWLPNGCVTLRDSRPKEQAGESGQHHRLSTYDNVHQQFCTPSLDDKQSVDSATWSTSSCEISLPDNSNSCRSSTTTCPEQDFYGGSFEDPLLDGPPQDEPARAGDCEGRAERRSVGGRSSRATSSSDNSETFVGTAAGSHSALHSLVSSLKQEMTKQKVEYESRIKSLEQRNLTLETEMMSLHDELDQERKKFTMIEIKMRNAERAKEDAEKRNDMLQKEMEQFFSTFGELTVEPRRTERGNTIWIQ
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(553895..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636500,787196..787283,857689..857868))
location: region:553895-857868:-1
so has part: feature:857689-857868:-1:exon
so has part: feature:787196-787283:-1:exon
so has part: feature:636378-636500:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:553895-554138:-1:exon

XP_012626367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:857689-857868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:787196-787283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:636378-636500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:553895-554138:-1:exon

ARHGAP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARHGAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 24 isoform X3
translation: MTANHESYLLMASTQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVEDPLTIMEGTVVVRQLMSVMISGHERLFPKDAEPQSNNNDDAARKAGVGQAQNKENNNTTDGPGRRCSWDRPESPQRGGLDNGPAAAAPGSKGSSPRSSAHQPDACRSPPLTVKKNPAFSKGSGIVTNGSFSSSSAAEGLERTQATPNGSLQARRTSSLKGPGTKMGTHSVQNGASRAGALAADALGSPAGGRGLGWLPNGCVTLRDSRPKEQAGESGQHHRLSTYDNVHQQFCTPSLDDKQSVDSATWSTSSCEISLPDNSNSCRSSTTTCPEQDFYGGSFEDPLLDGPPQDEPARAGDCEGRAERRSVGGRSSRATSSSDNSETFVGTAAGSHSALHSLVSSLKQEMTKQKVEYESRIKSLEQRNLTLETEMMSLHDELDQERKKFTMIEIKMRNAERAKEDAEKRNDMLQKEMEQFFSTFGELTVEPRRTERGNTIWIQ
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(553895..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636483))
location: region:553895-636483:-1
so has part: feature:636378-636483:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:553895-554138:-1:exon

XP_012626369.1
type: Protein
SIO_000068: ncbiprotein

position:636483:-1
position: 636483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636378-636483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553895-554138:-1:exon

ARHGAP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARHGAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 24 isoform X3
translation: MTANHESYLLMASTQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVEDPLTIMEGTVVVRQLMSVMISGHERLFPKDAEPQSNNNDDAARKAGVGQAQNKENNNTTDGPGRRCSWDRPESPQRGGLDNGPAAAAPGSKGSSPRSSAHQPDACRSPPLTVKKNPAFSKGSGIVTNGSFSSSSAAEGLERTQATPNGSLQARRTSSLKGPGTKMGTHSVQNGASRAGALAADALGSPAGGRGLGWLPNGCVTLRDSRPKEQAGESGQHHRLSTYDNVHQQFCTPSLDDKQSVDSATWSTSSCEISLPDNSNSCRSSTTTCPEQDFYGGSFEDPLLDGPPQDEPARAGDCEGRAERRSVGGRSSRATSSSDNSETFVGTAAGSHSALHSLVSSLKQEMTKQKVEYESRIKSLEQRNLTLETEMMSLHDELDQERKKFTMIEIKMRNAERAKEDAEKRNDMLQKEMEQFFSTFGELTVEPRRTERGNTIWIQ
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(553895..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636483))
location: region:553895-636483:-1
so has part: feature:636378-636483:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:553895-554138:-1:exon

XP_012626370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636378-636483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553895-554138:-1:exon

ARHGAP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARHGAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 24 isoform X3
translation: MTANHESYLLMASTQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVEDPLTIMEGTVVVRQLMSVMISGHERLFPKDAEPQSNNNDDAARKAGVGQAQNKENNNTTDGPGRRCSWDRPESPQRGGLDNGPAAAAPGSKGSSPRSSAHQPDACRSPPLTVKKNPAFSKGSGIVTNGSFSSSSAAEGLERTQATPNGSLQARRTSSLKGPGTKMGTHSVQNGASRAGALAADALGSPAGGRGLGWLPNGCVTLRDSRPKEQAGESGQHHRLSTYDNVHQQFCTPSLDDKQSVDSATWSTSSCEISLPDNSNSCRSSTTTCPEQDFYGGSFEDPLLDGPPQDEPARAGDCEGRAERRSVGGRSSRATSSSDNSETFVGTAAGSHSALHSLVSSLKQEMTKQKVEYESRIKSLEQRNLTLETEMMSLHDELDQERKKFTMIEIKMRNAERAKEDAEKRNDMLQKEMEQFFSTFGELTVEPRRTERGNTIWIQ
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(553895..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636483))
location: region:553895-636483:-1
so has part: feature:636378-636483:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:553895-554138:-1:exon

XP_012626373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636378-636483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553895-554138:-1:exon

ARHGAP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARHGAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 24 isoform X3
translation: MTANHESYLLMASTQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVEDPLTIMEGTVVVRQLMSVMISGHERLFPKDAEPQSNNNDDAARKAGVGQAQNKENNNTTDGPGRRCSWDRPESPQRGGLDNGPAAAAPGSKGSSPRSSAHQPDACRSPPLTVKKNPAFSKGSGIVTNGSFSSSSAAEGLERTQATPNGSLQARRTSSLKGPGTKMGTHSVQNGASRAGALAADALGSPAGGRGLGWLPNGCVTLRDSRPKEQAGESGQHHRLSTYDNVHQQFCTPSLDDKQSVDSATWSTSSCEISLPDNSNSCRSSTTTCPEQDFYGGSFEDPLLDGPPQDEPARAGDCEGRAERRSVGGRSSRATSSSDNSETFVGTAAGSHSALHSLVSSLKQEMTKQKVEYESRIKSLEQRNLTLETEMMSLHDELDQERKKFTMIEIKMRNAERAKEDAEKRNDMLQKEMEQFFSTFGELTVEPRRTERGNTIWIQ
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(553895..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636483))
location: region:553895-636483:-1
so has part: feature:636378-636483:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:553895-554138:-1:exon

XP_012626374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636378-636483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553895-554138:-1:exon

ARHGAP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARHGAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 24 isoform X3
translation: MTANHESYLLMASTQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVEDPLTIMEGTVVVRQLMSVMISGHERLFPKDAEPQSNNNDDAARKAGVGQAQNKENNNTTDGPGRRCSWDRPESPQRGGLDNGPAAAAPGSKGSSPRSSAHQPDACRSPPLTVKKNPAFSKGSGIVTNGSFSSSSAAEGLERTQATPNGSLQARRTSSLKGPGTKMGTHSVQNGASRAGALAADALGSPAGGRGLGWLPNGCVTLRDSRPKEQAGESGQHHRLSTYDNVHQQFCTPSLDDKQSVDSATWSTSSCEISLPDNSNSCRSSTTTCPEQDFYGGSFEDPLLDGPPQDEPARAGDCEGRAERRSVGGRSSRATSSSDNSETFVGTAAGSHSALHSLVSSLKQEMTKQKVEYESRIKSLEQRNLTLETEMMSLHDELDQERKKFTMIEIKMRNAERAKEDAEKRNDMLQKEMEQFFSTFGELTVEPRRTERGNTIWIQ
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(553895..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636483))
location: region:553895-636483:-1
so has part: feature:636378-636483:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:553895-554138:-1:exon

XP_012626375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636378-636483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553895-554138:-1:exon

ARHGAP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARHGAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 24 isoform X3
translation: MTANHESYLLMASTQNDMEDWVKSIRRVIWGPFGGGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVEDPLTIMEGTVVVRQLMSVMISGHERLFPKDAEPQSNNNDDAARKAGVGQAQNKENNNTTDGPGRRCSWDRPESPQRGGLDNGPAAAAPGSKGSSPRSSAHQPDACRSPPLTVKKNPAFSKGSGIVTNGSFSSSSAAEGLERTQATPNGSLQARRTSSLKGPGTKMGTHSVQNGASRAGALAADALGSPAGGRGLGWLPNGCVTLRDSRPKEQAGESGQHHRLSTYDNVHQQFCTPSLDDKQSVDSATWSTSSCEISLPDNSNSCRSSTTTCPEQDFYGGSFEDPLLDGPPQDEPARAGDCEGRAERRSVGGRSSRATSSSDNSETFVGTAAGSHSALHSLVSSLKQEMTKQKVEYESRIKSLEQRNLTLETEMMSLHDELDQERKKFTMIEIKMRNAERAKEDAEKRNDMLQKEMEQFFSTFGELTVEPRRTERGNTIWIQ
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(553895..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,636378..636483))
location: region:553895-636483:-1
so has part: feature:636378-636483:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:553895-554138:-1:exon

XP_012626376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636378-636483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553895-554138:-1:exon

ARHGAP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARHGAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 24 isoform X2
translation: MMPEDRNAGGRPEGALASTPFLPKTTYRRIKRCFSFRKGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVEDPLTIMEGTVVVRQLMSVMISGHERLFPKDAEPQSNNNDDAARKAGVGQAQNKENNNTTDGPGRRCSWDRPESPQRGGLDNGPAAAAPGSKGSSPRSSAHQPDACRSPPLTVKKNPAFSKGSGIVTNGSFSSSSAAEGLERTQATPNGSLQARRTSSLKGPGTKMGTHSVQNGASRAGALAADALGSPAGGRGLGWLPNGCVTLRDSRPKEQAGESGQHHRLSTYDNVHQQFCTPSLDDKQSVDSATWSTSSCEISLPDNSNSCRSSTTTCPEQDFYGGSFEDPLLDGPPQDEPARAGDCEGRAERRSVGGRSSRATSSSDNSETFVGTAAGSHSALHSLVSSLKQEMTKQKVEYESRIKSLEQRNLTLETEMMSLHDELDQERKKFTMIEIKMRNAERAKEDAEKRNDMLQKEMEQFFSTFGELTVEPRRTERGNTIWIQ
SIO_010081: ARHGAP24
subclass of: SO_0000673
so part of: ARHGAP24
location: complement(join(553895..554138,558315..559374,565914..566035,567751..567824,570472..570604,609101..609308,621694..621808))
location: region:553895-621808:-1
so has part: feature:621694-621808:-1:exon
so has part: feature:609101-609308:-1:exon
so has part: feature:570472-570604:-1:exon
so has part: feature:567751-567824:-1:exon
so has part: feature:565914-566035:-1:exon
so has part: feature:558315-559374:-1:exon
so has part: feature:553895-554138:-1:exon

XP_012626368.1
type: Protein
SIO_000068: ncbiprotein

position:621808:-1
position: 621808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621694-621808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609101-609308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570472-570604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567751-567824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:565914-566035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558315-559374:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553895-554138:-1:exon

LOC105874804
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105874804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1155295..1163796
location: region:1155295-1163796:1
so has part: feature:1155295-1163796:1:exon
subclass of: SO_0000011

105874804
type: Gene
SIO_000068: ncbigene

position:1155295:1
position: 1155295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163796:1
position: 1163796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155295-1163796:1:exon

LOC105874804
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105874804
product: uncharacterized LOC105874804
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001155668.1
SIO_010081: LOC105874804
subclass of: SO_0000673
so part of: LOC105874804
location: join(1155295..1155335,1159415..1159502,1163756..1163796)
location: region:1155295-1163796:1
so has part: feature:1155295-1155335:1:exon
so has part: feature:1159415-1159502:1:exon
so has part: feature:1163756-1163796:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1155295-1155335:1:exon

position:1155335:1
position: 1155335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1159415-1159502:1:exon

position:1159415:1
position: 1159415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159502:1
position: 1159502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1163756-1163796:1:exon

position:1163756:1
position: 1163756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDFY3
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: WDFY3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1203800..1457416
location: region:1203800-1457416:1
so has part: feature:1203800-1457416:1:exon
subclass of: SO_0000010

105874801
type: Gene
SIO_000068: ncbigene

position:1203800:1
position: 1203800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457416:1
position: 1457416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203800-1457416:1:exon

WDFY3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: WDFY3
product: WD repeat and FYVE domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 154 ESTs, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284530.1
SIO_010081: WDFY3
subclass of: SO_0000673
so part of: WDFY3
location: join(1203800..1203904,1223289..1223382,1235141..1235221,1280287..1280554,1297439..1297679,1302086..1302195,1306365..1306526,1312307..1312499,1314132..1314318,1315991..1316157,1318809..1319276,1320139..1320240,1322837..1323030,1325400..1325857,1327374..1327457,1332694..1332871,1333709..1333923,1337453..1337565,1340018..1340249,1341788..1341888,1342056..1342274,1344951..1345132,1348769..1349000,1350736..1350896,1353494..1353605,1355418..1355608,1357204..1357356,1360876..1360949,1361031..1361192,1362566..1362660,1365893..1366013,1366556..1366773,1370341..1370576,1371778..1371912,1373430..1373609,1375395..1375628,1381090..1381189,1382709..1382957,1385354..1385421,1385506..1385662,1395886..1396068,1397295..1397452,1398530..1398607,1400088..1400315,1405751..1405804,1408060..1408228,1411260..1411423,1414095..1414243,1415924..1416044,1416661..1416746,1420105..1420185,1422815..1422869,1423131..1423286,1424667..1424777,1426369..1426522,1432354..1432445,1433001..1433213,1436507..1436654,1438240..1438394,1439513..1439671,1440632..1440811,1444169..1444351,1445588..1445684,1448819..1449145,1450260..1450371,1451133..1451330,1454004..1457416)
location: region:1203800-1457416:1
so has part: feature:1203800-1203904:1:exon
so has part: feature:1223289-1223382:1:exon
so has part: feature:1235141-1235221:1:exon
so has part: feature:1280287-1280554:1:exon
so has part: feature:1297439-1297679:1:exon
so has part: feature:1302086-1302195:1:exon
so has part: feature:1306365-1306526:1:exon
so has part: feature:1312307-1312499:1:exon
so has part: feature:1314132-1314318:1:exon
so has part: feature:1315991-1316157:1:exon
so has part: feature:1318809-1319276:1:exon
so has part: feature:1320139-1320240:1:exon
so has part: feature:1322837-1323030:1:exon
so has part: feature:1325400-1325857:1:exon
so has part: feature:1327374-1327457:1:exon
so has part: feature:1332694-1332871:1:exon
so has part: feature:1333709-1333923:1:exon
so has part: feature:1337453-1337565:1:exon
so has part: feature:1340018-1340249:1:exon
so has part: feature:1341788-1341888:1:exon
so has part: feature:1342056-1342274:1:exon
so has part: feature:1344951-1345132:1:exon
so has part: feature:1348769-1349000:1:exon
so has part: feature:1350736-1350896:1:exon
so has part: feature:1353494-1353605:1:exon
so has part: feature:1355418-1355608:1:exon
so has part: feature:1357204-1357356:1:exon
so has part: feature:1360876-1360949:1:exon
so has part: feature:1361031-1361192:1:exon
so has part: feature:1362566-1362660:1:exon
so has part: feature:1365893-1366013:1:exon
so has part: feature:1366556-1366773:1:exon
so has part: feature:1370341-1370576:1:exon
so has part: feature:1371778-1371912:1:exon
so has part: feature:1373430-1373609:1:exon
so has part: feature:1375395-1375628:1:exon
so has part: feature:1381090-1381189:1:exon
so has part: feature:1382709-1382957:1:exon
so has part: feature:1385354-1385421:1:exon
so has part: feature:1385506-1385662:1:exon
so has part: feature:1395886-1396068:1:exon
so has part: feature:1397295-1397452:1:exon
so has part: feature:1398530-1398607:1:exon
so has part: feature:1400088-1400315:1:exon
so has part: feature:1405751-1405804:1:exon
so has part: feature:1408060-1408228:1:exon
so has part: feature:1411260-1411423:1:exon
so has part: feature:1414095-1414243:1:exon
so has part: feature:1415924-1416044:1:exon
so has part: feature:1416661-1416746:1:exon
so has part: feature:1420105-1420185:1:exon
so has part: feature:1422815-1422869:1:exon
so has part: feature:1423131-1423286:1:exon
so has part: feature:1424667-1424777:1:exon
so has part: feature:1426369-1426522:1:exon
so has part: feature:1432354-1432445:1:exon
so has part: feature:1433001-1433213:1:exon
so has part: feature:1436507-1436654:1:exon
so has part: feature:1438240-1438394:1:exon
so has part: feature:1439513-1439671:1:exon
so has part: feature:1440632-1440811:1:exon
so has part: feature:1444169-1444351:1:exon
so has part: feature:1445588-1445684:1:exon
so has part: feature:1448819-1449145:1:exon
so has part: feature:1450260-1450371:1:exon
so has part: feature:1451133-1451330:1:exon
so has part: feature:1454004-1457416:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1203800-1203904:1:exon

position:1203904:1
position: 1203904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1223289-1223382:1:exon

position:1223289:1
position: 1223289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223382:1
position: 1223382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1235141-1235221:1:exon

position:1235141:1
position: 1235141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235221:1
position: 1235221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1280287-1280554:1:exon

position:1280287:1
position: 1280287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280554:1
position: 1280554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1297439-1297679:1:exon

position:1297439:1
position: 1297439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297679:1
position: 1297679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1302086-1302195:1:exon

position:1302086:1
position: 1302086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1302195:1
position: 1302195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1306365-1306526:1:exon

position:1306365:1
position: 1306365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306526:1
position: 1306526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1312307-1312499:1:exon

position:1312307:1
position: 1312307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1312499:1
position: 1312499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1314132-1314318:1:exon

position:1314132:1
position: 1314132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314318:1
position: 1314318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1315991-1316157:1:exon

position:1315991:1
position: 1315991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316157:1
position: 1316157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1318809-1319276:1:exon

position:1318809:1
position: 1318809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319276:1
position: 1319276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1320139-1320240:1:exon

position:1320139:1
position: 1320139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1320240:1
position: 1320240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1322837-1323030:1:exon

position:1322837:1
position: 1322837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323030:1
position: 1323030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1325400-1325857:1:exon

position:1325400:1
position: 1325400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325857:1
position: 1325857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1327374-1327457:1:exon

position:1327374:1
position: 1327374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1327457:1
position: 1327457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1332694-1332871:1:exon

position:1332694:1
position: 1332694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1332871:1
position: 1332871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1333709-1333923:1:exon

position:1333709:1
position: 1333709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333923:1
position: 1333923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1337453-1337565:1:exon

position:1337453:1
position: 1337453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337565:1
position: 1337565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1340018-1340249:1:exon

position:1340018:1
position: 1340018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340249:1
position: 1340249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1341788-1341888:1:exon

position:1341788:1
position: 1341788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1341888:1
position: 1341888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1342056-1342274:1:exon

position:1342056:1
position: 1342056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1342274:1
position: 1342274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1344951-1345132:1:exon

position:1344951:1
position: 1344951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1345132:1
position: 1345132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1348769-1349000:1:exon

position:1348769:1
position: 1348769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349000:1
position: 1349000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1350736-1350896:1:exon

position:1350736:1
position: 1350736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350896:1
position: 1350896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1353494-1353605:1:exon

position:1353494:1
position: 1353494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1353605:1
position: 1353605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1355418-1355608:1:exon

position:1355418:1
position: 1355418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1355608:1
position: 1355608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1357204-1357356:1:exon

position:1357204:1
position: 1357204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357356:1
position: 1357356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1360876-1360949:1:exon

position:1360876:1
position: 1360876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1360949:1
position: 1360949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1361031-1361192:1:exon

position:1361031:1
position: 1361031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1361192:1
position: 1361192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1362566-1362660:1:exon

position:1362566:1
position: 1362566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362660:1
position: 1362660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1365893-1366013:1:exon

position:1365893:1
position: 1365893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1366013:1
position: 1366013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1366556-1366773:1:exon

position:1366556:1
position: 1366556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1366773:1
position: 1366773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1370341-1370576:1:exon

position:1370341:1
position: 1370341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1370576:1
position: 1370576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1371778-1371912:1:exon

position:1371778:1
position: 1371778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1371912:1
position: 1371912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1373430-1373609:1:exon

position:1373430:1
position: 1373430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373609:1
position: 1373609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1375395-1375628:1:exon

position:1375395:1
position: 1375395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1375628:1
position: 1375628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1381090-1381189:1:exon

position:1381090:1
position: 1381090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381189:1
position: 1381189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1382709-1382957:1:exon

position:1382709:1
position: 1382709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382957:1
position: 1382957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1385354-1385421:1:exon

position:1385354:1
position: 1385354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385421:1
position: 1385421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1385506-1385662:1:exon

position:1385506:1
position: 1385506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385662:1
position: 1385662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1395886-1396068:1:exon

position:1395886:1
position: 1395886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1396068:1
position: 1396068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1397295-1397452:1:exon

position:1397295:1
position: 1397295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1397452:1
position: 1397452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1398530-1398607:1:exon

position:1398530:1
position: 1398530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398607:1
position: 1398607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1400088-1400315:1:exon

position:1400088:1
position: 1400088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400315:1
position: 1400315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1405751-1405804:1:exon

position:1405751:1
position: 1405751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405804:1
position: 1405804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1408060-1408228:1:exon

position:1408060:1
position: 1408060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408228:1
position: 1408228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1411260-1411423:1:exon

position:1411260:1
position: 1411260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1411423:1
position: 1411423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1414095-1414243:1:exon

position:1414095:1
position: 1414095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414243:1
position: 1414243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1415924-1416044:1:exon

position:1415924:1
position: 1415924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1416044:1
position: 1416044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1416661-1416746:1:exon

position:1416661:1
position: 1416661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1416746:1
position: 1416746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:1420105-1420185:1:exon

position:1420105:1
position: 1420105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1420185:1
position: 1420185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:1422815-1422869:1:exon

position:1422815:1
position: 1422815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1422869:1
position: 1422869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:1423131-1423286:1:exon

position:1423131:1
position: 1423131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423286:1
position: 1423286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:1424667-1424777:1:exon

position:1424667:1
position: 1424667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424777:1
position: 1424777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:1426369-1426522:1:exon

position:1426369:1
position: 1426369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426522:1
position: 1426522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:1432354-1432445:1:exon

position:1432354:1
position: 1432354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432445:1
position: 1432445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:1433001-1433213:1:exon

position:1433001:1
position: 1433001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1433213:1
position: 1433213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:1436507-1436654:1:exon

position:1436507:1
position: 1436507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436654:1
position: 1436654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 59
SIO_000628: feature:1438240-1438394:1:exon

position:1438240:1
position: 1438240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438394:1
position: 1438394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:1439513-1439671:1:exon

position:1439513:1
position: 1439513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439671:1
position: 1439671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 61
SIO_000628: feature:1440632-1440811:1:exon

position:1440632:1
position: 1440632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1440811:1
position: 1440811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 62
SIO_000628: feature:1444169-1444351:1:exon

position:1444169:1
position: 1444169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444351:1
position: 1444351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 63
SIO_000628: feature:1445588-1445684:1:exon

position:1445588:1
position: 1445588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445684:1
position: 1445684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 64
SIO_000628: feature:1448819-1449145:1:exon

position:1448819:1
position: 1448819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1449145:1
position: 1449145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 65
SIO_000628: feature:1450260-1450371:1:exon

position:1450260:1
position: 1450260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1450371:1
position: 1450371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 66
SIO_000628: feature:1451133-1451330:1:exon

position:1451133:1
position: 1451133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451330:1
position: 1451330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 67
SIO_000628: feature:1454004-1457416:1:exon

position:1454004:1
position: 1454004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109730139
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1231341..1232990)
location: region:1231341-1232990:-1
so has part: feature:1231341-1232990:-1:exon

109730139
type: Gene
SIO_000068: ncbigene

position:1231341:-1
position: 1231341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232990:-1
position: 1232990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231341-1232990:-1:exon

LOC109730139
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC109730139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109730139
subclass of: SO_0000673
so part of: LOC109730139
location: complement(1231341..1232990)
location: region:1231341-1232990:-1
so has part: feature:1231341-1232990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1231341-1232990:-1:exon

WDFY3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: WDFY3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat and FYVE domain-containing protein 3
translation: MALRHDNRIRSVPHQPAKMNMVKRIMGRPRQEECSPQDNALGLMHLRRLFTELCHPPRHMTQKEQEEKLYMMLPVFNRVSAGCQATLLQGIRNRNFKYLQFISDFAACGVPLLNPVGPAPAGGHPAVEWLDGADHGPPVGGWRGVPSPQVDNPAFFLQTEKQCALLSPKDFKATTPSEAASRAIVQFLEINQSEEASRGWMLLTTINLLASSGQKTVDCMTTMSVPSTLVKCLYLFFDLPHVPEAVGGAQNELPLAERRGLLQKVFVQILVKLCSFVSPAEELAQKDDLQLLFSAITSWCPPYNLPWRKSAGEVLMTISRHGLSVNVVKYIHEKECLSTCVQNMQQSDDLSPLEIVEMFAGLSCFLKDSSDVSQTLLDDFRIWQGYNFLCDLLLRLEQAKEAESKDALKDLVNLITSLTTYGVNELKPAGITTGAPFLLPGFAVPQPAGKGHSVRNIQAFAVLQNAFLKAKTSFLAQIILDAITNIYMADNANYFILESQHTLSQFAEKISKLPEVQNKYFEMLEFVVFSLNYIPCKELISVSILLKSSSSHYCSIIAMKTLLKFTRHDGIFKDVFREVGLLEVMVNLLHKYAALLKDPTQALNEQGDSRNNSSVEDQKHLALLVMETLTVLLQGSNTNAGIFREFGGARCAHNIVKYPQCRQHALMTIQQLVLSPNGDDDMGTLLGLMHSAPPTELQLKTDILRALLSVLRESHRSRTVFRKVGGFVYITSLLVAMERSLSFPPKNGWEKVSQSQVFELLHTVFCTLTAAMRYEPANSHFFKTEIQYEKLADAVRFLGCFSDLRKISAMNVFPSNTQPFQRLLEEDAVSADSVSPTLRHCSKLFIYLYKVATDSFDSRAEQIPPCLTSESSLPSPWGTPALSRKRHAYHSVSTPPIYPAKNVADLKLHVTTSALPSSDAVIIHPGAMIAMLDLLASVGSVTQPEHALDLQLAVANILQSLVHTERNQQVMCEAGLHARLLQRCSAALADEDHSLHPPLQRMFERLASQALEPMVLREFLRLASPLNCGAWDKKLLKQYRVHKPSSLSYEPEMRSSMITSLEGLGSDNVFSLHEDNHYRISKSLVKSAEGSTVPLTRVKCLVSMTTPHDIRLHGSSVTPAFVEFDTSLEGFGCLFLPSLAPHNAPTNNAVTTGLADGAVVSGIGSGERLFPPPSGLSYSSWFCIEHFSSPPNNHPVRLLTVVRRANSSEQHYVCLAVVLSAKDRSLIISTKEELLQNYVDDFSEESSFYEILPCCARFRCGELIVEGQWHHLVLVMSKGMLKNSTAALYIDGQLVNTVKLHYVHSTSGGSSSANPPVVSTVYAYIGTPPAQRQIASLVWRLGPTHFLEEVLPPSSVTTIYELGPNYVGSFQAVCMPCKDAKSEGVIPSPVSLVPEEKVSFGLYALSVSSLTVARIRKVYNKLDSKAIAKQLGISSHENATPVKLIHNSAGHLNGPARTVGAALIGYLGVRTFVPKPVATTLQYIGGAAAILGLVAMASDVEGLYAAVKALVCVVKSNPLASKEMERIKGYQLLAMLLKKKRSLLNSHILHLTFSLVGTVDSGHETSIIPNSTAFQDLLCDFEVWLHAPYELHLSLFEHFIELLTESSEASKNAKLMREFQLIPKLLLTLRDMSLSQPTIAAISNVLSFLLQGFPNGNDLLRFGQFISSTLPTFAVCEKFVVMEINNEEKLDTGTEEEFGGLVSANLILLRNRLLDILLKLIYTSKEKTSINLQACEELVKTLGFDWIMMFMEEHLHSTTVTAAMRILVVLLSNQSILIKFKEGLSGGGWLEQTDSVLTNKIGTVLGFNVGRSAGGRSTVREINRDACHFPGFPVLQSFLPKHTNVPALYFLLMALFLQQPVSELPENLQVSVPVASCRCKQGGQFDLDSIWTFIFGVPASSGTVVSSIHNVCTEAAFLLLGMLRSMLNSPWQSEEEGSWLREYPVTLMQFFRYLYHNVPDLASMWMSPDFLCALAATVFPFNIRPYSEMVTDLDDEVGSP…
SIO_010081: WDFY3
subclass of: SO_0000673
so part of: WDFY3
location: join(1235199..1235221,1280287..1280554,1297439..1297679,1302086..1302195,1306365..1306526,1312307..1312499,1314132..1314318,1315991..1316157,1318809..1319276,1320139..1320240,1322837..1323030,1325400..1325857,1327374..1327457,1332694..1332871,1333709..1333923,1337453..1337565,1340018..1340249,1341788..1341888,1342056..1342274,1344951..1345132,1348769..1349000,1350736..1350896,1353494..1353605,1355418..1355608,1357204..1357356,1360876..1360949,1361031..1361192,1362566..1362660,1365893..1366013,1366556..1366773,1370341..1370576,1371778..1371912,1373430..1373609,1375395..1375628,1381090..1381189,1382709..1382957,1385354..1385421,1385506..1385662,1395886..1396068,1397295..1397452,1398530..1398607,1400088..1400315,1405751..1405804,1408060..1408228,1411260..1411423,1414095..1414243,1415924..1416044,1416661..1416746,1420105..1420185,1422815..1422869,1423131..1423286,1424667..1424777,1426369..1426522,1432354..1432445,1433001..1433213,1436507..1436654,1438240..1438394,1439513..1439671,1440632..1440811,1444169..1444351,1445588..1445684,1448819..1449145,1450260..1450371,1451133..1451330,1454004..1454127)
location: region:1235199-1454127:1
so has part: feature:1235199-1235221:1:exon
so has part: feature:1280287-1280554:1:exon
so has part: feature:1297439-1297679:1:exon
so has part: feature:1302086-1302195:1:exon
so has part: feature:1306365-1306526:1:exon
so has part: feature:1312307-1312499:1:exon
so has part: feature:1314132-1314318:1:exon
so has part: feature:1315991-1316157:1:exon
so has part: feature:1318809-1319276:1:exon
so has part: feature:1320139-1320240:1:exon
so has part: feature:1322837-1323030:1:exon
so has part: feature:1325400-1325857:1:exon
so has part: feature:1327374-1327457:1:exon
so has part: feature:1332694-1332871:1:exon
so has part: feature:1333709-1333923:1:exon
so has part: feature:1337453-1337565:1:exon
so has part: feature:1340018-1340249:1:exon
so has part: feature:1341788-1341888:1:exon
so has part: feature:1342056-1342274:1:exon
so has part: feature:1344951-1345132:1:exon
so has part: feature:1348769-1349000:1:exon
so has part: feature:1350736-1350896:1:exon
so has part: feature:1353494-1353605:1:exon
so has part: feature:1355418-1355608:1:exon
so has part: feature:1357204-1357356:1:exon
so has part: feature:1360876-1360949:1:exon
so has part: feature:1361031-1361192:1:exon
so has part: feature:1362566-1362660:1:exon
so has part: feature:1365893-1366013:1:exon
so has part: feature:1366556-1366773:1:exon
so has part: feature:1370341-1370576:1:exon
so has part: feature:1371778-1371912:1:exon
so has part: feature:1373430-1373609:1:exon
so has part: feature:1375395-1375628:1:exon
so has part: feature:1381090-1381189:1:exon
so has part: feature:1382709-1382957:1:exon
so has part: feature:1385354-1385421:1:exon
so has part: feature:1385506-1385662:1:exon
so has part: feature:1395886-1396068:1:exon
so has part: feature:1397295-1397452:1:exon
so has part: feature:1398530-1398607:1:exon
so has part: feature:1400088-1400315:1:exon
so has part: feature:1405751-1405804:1:exon
so has part: feature:1408060-1408228:1:exon
so has part: feature:1411260-1411423:1:exon
so has part: feature:1414095-1414243:1:exon
so has part: feature:1415924-1416044:1:exon
so has part: feature:1416661-1416746:1:exon
so has part: feature:1420105-1420185:1:exon
so has part: feature:1422815-1422869:1:exon
so has part: feature:1423131-1423286:1:exon
so has part: feature:1424667-1424777:1:exon
so has part: feature:1426369-1426522:1:exon
so has part: feature:1432354-1432445:1:exon
so has part: feature:1433001-1433213:1:exon
so has part: feature:1436507-1436654:1:exon
so has part: feature:1438240-1438394:1:exon
so has part: feature:1439513-1439671:1:exon
so has part: feature:1440632-1440811:1:exon
so has part: feature:1444169-1444351:1:exon
so has part: feature:1445588-1445684:1:exon
so has part: feature:1448819-1449145:1:exon
so has part: feature:1450260-1450371:1:exon
so has part: feature:1451133-1451330:1:exon
so has part: feature:1454004-1454127:1:exon

XP_020140119.1
type: Protein
SIO_000068: ncbiprotein

position:1235199:1
position: 1235199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1454127:1
position: 1454127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1235199-1235221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1280287-1280554:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1297439-1297679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1302086-1302195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1306365-1306526:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1312307-1312499:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1314132-1314318:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1315991-1316157:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1318809-1319276:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1320139-1320240:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322837-1323030:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1325400-1325857:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1327374-1327457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1332694-1332871:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1333709-1333923:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1337453-1337565:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1340018-1340249:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1341788-1341888:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1342056-1342274:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1344951-1345132:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1348769-1349000:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1350736-1350896:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1353494-1353605:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1355418-1355608:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1357204-1357356:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1360876-1360949:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1361031-1361192:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1362566-1362660:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1365893-1366013:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1366556-1366773:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1370341-1370576:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1371778-1371912:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1373430-1373609:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1375395-1375628:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1381090-1381189:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1382709-1382957:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1385354-1385421:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1385506-1385662:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1395886-1396068:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1397295-1397452:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1398530-1398607:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1400088-1400315:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1405751-1405804:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1408060-1408228:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1411260-1411423:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1414095-1414243:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1415924-1416044:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1416661-1416746:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1420105-1420185:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1422815-1422869:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1423131-1423286:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1424667-1424777:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1426369-1426522:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1432354-1432445:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1433001-1433213:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1436507-1436654:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1438240-1438394:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1439513-1439671:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1440632-1440811:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1444169-1444351:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:1445588-1445684:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:1448819-1449145:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:1450260-1450371:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:1451133-1451330:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:1454004-1454127:1:exon

LOC105874791
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105874791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1475634..1533461)
location: region:1475634-1533461:-1
so has part: feature:1475634-1533461:-1:exon
subclass of: SO_0000010

105874791
type: Gene
SIO_000068: ncbigene

position:1475634:-1
position: 1475634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1533461:-1
position: 1533461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1475634-1533461:-1:exon

LOC105874791
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105874791
product: phosphatidate cytidylyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 14 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284581.1
SIO_010081: LOC105874791
subclass of: SO_0000673
so part of: LOC105874791
location: complement(join(1475634..1476422,1481357..1481460,1483030..1483149,1485382..1485534,1487255..1487323,1492728..1492815,1494696..1494778,1496743..1496801,1498856..1498995,1501079..1501176,1520245..1520469,1533246..1533461))
location: region:1475634-1533461:-1
so has part: feature:1533246-1533461:-1:exon
so has part: feature:1520245-1520469:-1:exon
so has part: feature:1501079-1501176:-1:exon
so has part: feature:1498856-1498995:-1:exon
so has part: feature:1496743-1496801:-1:exon
so has part: feature:1494696-1494778:-1:exon
so has part: feature:1492728-1492815:-1:exon
so has part: feature:1487255-1487323:-1:exon
so has part: feature:1485382-1485534:-1:exon
so has part: feature:1483030-1483149:-1:exon
so has part: feature:1481357-1481460:-1:exon
so has part: feature:1475634-1476422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1533246-1533461:-1:exon

position:1533246:-1
position: 1533246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1520245-1520469:-1:exon

position:1520245:-1
position: 1520245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1520469:-1
position: 1520469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1501079-1501176:-1:exon

position:1501079:-1
position: 1501079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1501176:-1
position: 1501176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1498856-1498995:-1:exon

position:1498856:-1
position: 1498856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498995:-1
position: 1498995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1496743-1496801:-1:exon

position:1496743:-1
position: 1496743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1496801:-1
position: 1496801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1494696-1494778:-1:exon

position:1494696:-1
position: 1494696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494778:-1
position: 1494778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1492728-1492815:-1:exon

position:1492728:-1
position: 1492728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1492815:-1
position: 1492815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1487255-1487323:-1:exon

position:1487255:-1
position: 1487255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1487323:-1
position: 1487323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1485382-1485534:-1:exon

position:1485382:-1
position: 1485382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485534:-1
position: 1485534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1483030-1483149:-1:exon

position:1483030:-1
position: 1483030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483149:-1
position: 1483149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1481357-1481460:-1:exon

position:1481357:-1
position: 1481357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1481460:-1
position: 1481460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1475634-1476422:-1:exon

position:1476422:-1
position: 1476422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105874791
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105874791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate cytidylyltransferase 1
translation: MLELRHRGAGPGPGAAGAPPPREGEAAGGDHETESTSDKETDIDDRYGDLDSRTDSDLPEIPPSSDRTPEILKKALSGLSSRWKNWWIRGILTLTMISLFFLIIYMGSFMLMLLVLSIQVKCFHEIITIGYRVYRSYDLPWFRTLSWYFLLCVNYFFYGETVADYFATFVQREEQLQFLIRYHRFISFALYLAGFCMFVLSLVKKHYRLQFYMFAWTHVTLLITVTQSHLVIQNLFEGMIWFLVPISSVICNDITAYLFGFFFGRTPLIKLSPKKTWEGFIGGFFSTVVFGFTAAYVLSKYQYFVCPVEYRSDVNSFVTECEPSELFRLQSYALPPFLQAVLRWETVSLYPFQIHSVALSTFASLIGPFGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVHVYITSFIRGPNPSKVLQQLLVLQPEQQLNIYRTLKTHLIEKGLLQPALKV
SIO_010081: LOC105874791
subclass of: SO_0000673
so part of: LOC105874791
location: complement(join(1476293..1476422,1481357..1481460,1483030..1483149,1485382..1485534,1487255..1487323,1492728..1492815,1494696..1494778,1496743..1496801,1498856..1498995,1501079..1501176,1520245..1520469,1533246..1533362))
location: region:1476293-1533362:-1
so has part: feature:1533246-1533362:-1:exon
so has part: feature:1520245-1520469:-1:exon
so has part: feature:1501079-1501176:-1:exon
so has part: feature:1498856-1498995:-1:exon
so has part: feature:1496743-1496801:-1:exon
so has part: feature:1494696-1494778:-1:exon
so has part: feature:1492728-1492815:-1:exon
so has part: feature:1487255-1487323:-1:exon
so has part: feature:1485382-1485534:-1:exon
so has part: feature:1483030-1483149:-1:exon
so has part: feature:1481357-1481460:-1:exon
so has part: feature:1476293-1476422:-1:exon

XP_020140170.1
type: Protein
SIO_000068: ncbiprotein

position:1476293:-1
position: 1476293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1533362:-1
position: 1533362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1533246-1533362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1520245-1520469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1501079-1501176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1498856-1498995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1496743-1496801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1494696-1494778:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1492728-1492815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1487255-1487323:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1485382-1485534:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1483030-1483149:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1481357-1481460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1476293-1476422:-1:exon

LOC109730137
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1485545..1497142
location: region:1485545-1497142:1
so has part: feature:1485545-1497142:1:exon
subclass of: SO_0000011

109730137
type: Gene
SIO_000068: ncbigene

position:1485545:1
position: 1485545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1497142:1
position: 1497142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1485545-1497142:1:exon

LOC109730137
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC109730137
product: uncharacterized LOC109730137
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222862.1
SIO_010081: LOC109730137
subclass of: SO_0000673
so part of: LOC109730137
location: join(1485545..1486678,1496052..1497142)
location: region:1485545-1497142:1
so has part: feature:1485545-1486678:1:exon
so has part: feature:1496052-1497142:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1485545-1486678:1:exon

position:1486678:1
position: 1486678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1496052-1497142:1:exon

position:1496052:1
position: 1496052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NKX6-1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: NKX6-1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1597675..1602816
location: region:1597675-1602816:1
so has part: feature:1597675-1602816:1:exon
subclass of: SO_0000010

105874802
type: Gene
SIO_000068: ncbigene

position:1597675:1
position: 1597675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1602816:1
position: 1602816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1597675-1602816:1:exon

NKX6-1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NKX6-1
product: NK6 homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 5 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012770931.2
SIO_010081: NKX6-1
subclass of: SO_0000673
so part of: NKX6-1
location: join(1597675..1598341,1600005..1600177,1602513..1602816)
location: region:1597675-1602816:1
so has part: feature:1597675-1598341:1:exon
so has part: feature:1600005-1600177:1:exon
so has part: feature:1602513-1602816:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1597675-1598341:1:exon

position:1598341:1
position: 1598341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1600005-1600177:1:exon

position:1600005:1
position: 1600005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1600177:1
position: 1600177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1602513-1602816:1:exon

position:1602513:1
position: 1602513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NKX6-1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NKX6-1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-6.1
translation: MLAVGAMEGARQSAFLLSSPPLAALHSMAEMKTPLYPAAYPALPAGPPSSSSSSSASASPSPPLGAHNPGGLKPPAAGGLSSLGSPPQQLSAANPHGINDILSRPSMPVAAGAALPSASPSGSSSSSSSSSSSSASAAAAAAAAAAAAASSPAGLLAGLPRFASLSPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPPWRDARLACAPHQGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDDDYNKPLDPNSDDEKITQLLKKHKSGGGGGGGLLLHAAEAEGSS
SIO_010081: NKX6-1
subclass of: SO_0000673
so part of: NKX6-1
location: join(1597675..1598341,1600005..1600177,1602513..1602773)
location: region:1597675-1602773:1
so has part: feature:1597675-1598341:1:exon
so has part: feature:1600005-1600177:1:exon
so has part: feature:1602513-1602773:1:exon

XP_012626385.2
type: Protein
SIO_000068: ncbiprotein

position:1602773:1
position: 1602773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1597675-1598341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1600005-1600177:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1602513-1602773:1:exon

LOC105874799
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105874799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1880190..1906165)
location: region:1880190-1906165:-1
so has part: feature:1880190-1906165:-1:exon
subclass of: SO_0000011

105874799
type: Gene
SIO_000068: ncbigene

position:1880190:-1
position: 1880190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906165:-1
position: 1906165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1880190-1906165:-1:exon

LOC105874799
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105874799
product: uncharacterized LOC105874799
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222858.1
SIO_010081: LOC105874799
subclass of: SO_0000673
so part of: LOC105874799
location: complement(join(1880190..1880408,1900089..1900201,1905980..1906165))
location: region:1880190-1906165:-1
so has part: feature:1905980-1906165:-1:exon
so has part: feature:1900089-1900201:-1:exon
so has part: feature:1880190-1880408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1905980-1906165:-1:exon

position:1905980:-1
position: 1905980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1900089-1900201:-1:exon

position:1900089:-1
position: 1900089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1900201:-1
position: 1900201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1880190-1880408:-1:exon

position:1880408:-1
position: 1880408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105874796
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105874796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1909888..1991035
location: region:1909888-1991035:1
so has part: feature:1909888-1991035:1:exon
subclass of: SO_0000011

105874796
type: Gene
SIO_000068: ncbigene

position:1909888:1
position: 1909888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1991035:1
position: 1991035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1909888-1991035:1:exon

LOC105874796
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105874796
product: uncharacterized LOC105874796, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001155664.2
SIO_010081: LOC105874796
subclass of: SO_0000673
so part of: LOC105874796
location: join(1909888..1910246,1962337..1962464,1985746..1986500,1987497..1991035)
location: region:1909888-1991035:1
so has part: feature:1909888-1910246:1:exon
so has part: feature:1962337-1962464:1:exon
so has part: feature:1985746-1986500:1:exon
so has part: feature:1987497-1991035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1909888-1910246:1:exon

position:1910246:1
position: 1910246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1962337-1962464:1:exon

position:1962337:1
position: 1962337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1962464:1
position: 1962464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1985746-1986500:1:exon

position:1985746:1
position: 1985746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1986500:1
position: 1986500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1987497-1991035:1:exon

position:1987497:1
position: 1987497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105874796
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105874796
product: uncharacterized LOC105874796, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001155663.2
SIO_010081: LOC105874796
subclass of: SO_0000673
so part of: LOC105874796
location: join(1910106..1910246,1962337..1962464,1971100..1971686)
location: region:1910106-1971686:1
so has part: feature:1910106-1910246:1:exon
so has part: feature:1962337-1962464:1:exon
so has part: feature:1971100-1971686:1:exon

position:1910106:1
position: 1910106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1971686:1
position: 1971686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1910106-1910246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1962337-1962464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1971100-1971686:1:exon

position:1971100:1
position: 1971100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109730135
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1963553..1967278)
location: region:1963553-1967278:-1
so has part: feature:1963553-1967278:-1:exon
subclass of: SO_0000011

109730135
type: Gene
SIO_000068: ncbigene

position:1963553:-1
position: 1963553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1967278:-1
position: 1967278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1963553-1967278:-1:exon

LOC109730135
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC109730135
product: uncharacterized LOC109730135
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222859.1
SIO_010081: LOC109730135
subclass of: SO_0000673
so part of: LOC109730135
location: complement(join(1963553..1964687,1965658..1965816,1966818..1967278))
location: region:1963553-1967278:-1
so has part: feature:1966818-1967278:-1:exon
so has part: feature:1965658-1965816:-1:exon
so has part: feature:1963553-1964687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1966818-1967278:-1:exon

position:1966818:-1
position: 1966818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1965658-1965816:-1:exon

position:1965658:-1
position: 1965658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1965816:-1
position: 1965816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1963553-1964687:-1:exon

position:1964687:-1
position: 1964687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105874794
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105874794
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1972669..1975769
location: region:1972669-1975769:1
so has part: feature:1972669-1975769:1:exon
subclass of: SO_0000011

105874794
type: Gene
SIO_000068: ncbigene

position:1972669:1
position: 1972669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1975769:1
position: 1975769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1972669-1975769:1:exon

LOC105874794
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105874794
product: uncharacterized LOC105874794, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001155660.2
SIO_010081: LOC105874794
subclass of: SO_0000673
so part of: LOC105874794
location: join(1972669..1972928,1973403..1973737,1974122..1975769)
location: region:1972669-1975769:1
so has part: feature:1972669-1972928:1:exon
so has part: feature:1973403-1973737:1:exon
so has part: feature:1974122-1975769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1972669-1972928:1:exon

position:1972928:1
position: 1972928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1973403-1973737:1:exon

position:1973403:1
position: 1973403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1973737:1
position: 1973737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1974122-1975769:1:exon

position:1974122:1
position: 1974122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105874794
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105874794
product: uncharacterized LOC105874794, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001155661.2
SIO_010081: LOC105874794
subclass of: SO_0000673
so part of: LOC105874794
location: join(1972669..1972928,1973403..1973737,1974122..1974516,1974645..1975769)
location: region:1972669-1975769:1
so has part: feature:1972669-1972928:1:exon
so has part: feature:1973403-1973737:1:exon
so has part: feature:1974122-1974516:1:exon
so has part: feature:1974645-1975769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1972669-1972928:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1973403-1973737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1974122-1974516:1:exon

position:1974516:1
position: 1974516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1974645-1975769:1:exon

position:1974645:1
position: 1974645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105874797
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105874797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1975827..1985076
location: region:1975827-1985076:1
so has part: feature:1975827-1985076:1:exon
subclass of: SO_0000011

105874797
type: Gene
SIO_000068: ncbigene

position:1975827:1
position: 1975827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1985076:1
position: 1985076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1975827-1985076:1:exon

LOC105874797
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105874797
product: uncharacterized LOC105874797
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001155665.2
SIO_010081: LOC105874797
subclass of: SO_0000673
so part of: LOC105874797
location: join(1975827..1976053,1984037..1985076)
location: region:1975827-1985076:1
so has part: feature:1975827-1976053:1:exon
so has part: feature:1984037-1985076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1975827-1976053:1:exon

position:1976053:1
position: 1976053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1984037-1985076:1:exon

position:1984037:1
position: 1984037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105874798
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105874798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2004858..2082844)
location: region:2004858-2082844:-1
so has part: feature:2004858-2082844:-1:exon
subclass of: SO_0000011

105874798
type: Gene
SIO_000068: ncbigene

position:2004858:-1
position: 2004858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2082844:-1
position: 2082844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2004858-2082844:-1:exon

LOC105874798
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105874798
product: uncharacterized LOC105874798
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001155666.2
SIO_010081: LOC105874798
subclass of: SO_0000673
so part of: LOC105874798
location: complement(join(2004858..2005688,2068041..2068157,2082691..2082844))
location: region:2004858-2082844:-1
so has part: feature:2082691-2082844:-1:exon
so has part: feature:2068041-2068157:-1:exon
so has part: feature:2004858-2005688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2082691-2082844:-1:exon

position:2082691:-1
position: 2082691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2068041-2068157:-1:exon

position:2068041:-1
position: 2068041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2068157:-1
position: 2068157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2004858-2005688:-1:exon

position:2005688:-1
position: 2005688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105874803
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105874803
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2156911..2157575
location: region:2156911-2157575:1
so has part: feature:2156911-2157575:1:exon

105874803
type: Gene
SIO_000068: ncbigene

position:2156911:1
position: 2156911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2157575:1
position: 2157575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2156911-2157575:1:exon

LOC105874803
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105874803
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105874803
subclass of: SO_0000673
so part of: LOC105874803
location: 2156911..2157575
location: region:2156911-2157575:1
so has part: feature:2156911-2157575:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2156911-2157575:1:exon

LOC105862332
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105862332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3026635..3039683
location: region:3026635-3039683:1
so has part: feature:3026635-3039683:1:exon
subclass of: SO_0000011

105862332
type: Gene
SIO_000068: ncbigene

position:3026635:1
position: 3026635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3039683:1
position: 3039683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3026635-3039683:1:exon

LOC105862332
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105862332
product: uncharacterized LOC105862332, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222875.1
SIO_010081: LOC105862332
subclass of: SO_0000673
so part of: LOC105862332
location: join(3026635..3026719,3029161..3029265,3031325..3031469,3039605..3039683)
location: region:3026635-3039683:1
so has part: feature:3026635-3026719:1:exon
so has part: feature:3029161-3029265:1:exon
so has part: feature:3031325-3031469:1:exon
so has part: feature:3039605-3039683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3026635-3026719:1:exon

position:3026719:1
position: 3026719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3029161-3029265:1:exon

position:3029161:1
position: 3029161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3029265:1
position: 3029265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3031325-3031469:1:exon

position:3031325:1
position: 3031325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3031469:1
position: 3031469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3039605-3039683:1:exon

position:3039605:1
position: 3039605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105862332
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105862332
product: uncharacterized LOC105862332, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222874.1
SIO_010081: LOC105862332
subclass of: SO_0000673
so part of: LOC105862332
location: join(3026635..3026719,3029161..3029265,3031325..3031469,3031961..3032274)
location: region:3026635-3032274:1
so has part: feature:3026635-3026719:1:exon
so has part: feature:3029161-3029265:1:exon
so has part: feature:3031325-3031469:1:exon
so has part: feature:3031961-3032274:1:exon

position:3032274:1
position: 3032274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3026635-3026719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3029161-3029265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031325-3031469:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3031961-3032274:1:exon

position:3031961:1
position: 3031961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUCLG2
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: SUCLG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3144033..3291284)
location: region:3144033-3291284:-1
so has part: feature:3144033-3291284:-1:exon
subclass of: SO_0000010

105862324
type: Gene
SIO_000068: ncbigene

position:3144033:-1
position: 3144033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3291284:-1
position: 3291284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3144033-3291284:-1:exon

SUCLG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SUCLG2
product: succinate-CoA ligase GDP-forming beta subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 15 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012748552.2
SIO_010081: SUCLG2
subclass of: SO_0000673
so part of: SUCLG2
location: complement(join(3144033..3144192,3246419..3246561,3248899..3249060,3258980..3259076,3265293..3265382,3267514..3267666,3276165..3276255,3277096..3277223,3291237..3291284))
location: region:3144033-3291284:-1
so has part: feature:3291237-3291284:-1:exon
so has part: feature:3277096-3277223:-1:exon
so has part: feature:3276165-3276255:-1:exon
so has part: feature:3267514-3267666:-1:exon
so has part: feature:3265293-3265382:-1:exon
so has part: feature:3258980-3259076:-1:exon
so has part: feature:3248899-3249060:-1:exon
so has part: feature:3246419-3246561:-1:exon
so has part: feature:3144033-3144192:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3291237-3291284:-1:exon

position:3291237:-1
position: 3291237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3277096-3277223:-1:exon

position:3277096:-1
position: 3277096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3277223:-1
position: 3277223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3276165-3276255:-1:exon

position:3276165:-1
position: 3276165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3276255:-1
position: 3276255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3267514-3267666:-1:exon

position:3267514:-1
position: 3267514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3267666:-1
position: 3267666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3265293-3265382:-1:exon

position:3265293:-1
position: 3265293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3265382:-1
position: 3265382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3258980-3259076:-1:exon

position:3258980:-1
position: 3258980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3259076:-1
position: 3259076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3248899-3249060:-1:exon

position:3248899:-1
position: 3248899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3249060:-1
position: 3249060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3246419-3246561:-1:exon

position:3246419:-1
position: 3246419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3246561:-1
position: 3246561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3144033-3144192:-1:exon

position:3144192:-1
position: 3144192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SUCLG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SUCLG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial
translation: MAVQAVAAFRSSVFITLPILDFSFSDAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPHVVGQLAKQMIGYNLATKQTPKEGVKVHKVMVAEALDIARETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFLGPLKNQAADQIKKLYNLFLKVDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKNIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGES
SIO_010081: SUCLG2
subclass of: SO_0000673
so part of: SUCLG2
location: complement(join(3144061..3144192,3246419..3246561,3248899..3249060,3258980..3259076,3265293..3265382,3267514..3267666,3276165..3276255,3277096..3277223,3291237..3291284))
location: region:3144061-3291284:-1
so has part: feature:3291237-3291284:-1:exon
so has part: feature:3277096-3277223:-1:exon
so has part: feature:3276165-3276255:-1:exon
so has part: feature:3267514-3267666:-1:exon
so has part: feature:3265293-3265382:-1:exon
so has part: feature:3258980-3259076:-1:exon
so has part: feature:3248899-3249060:-1:exon
so has part: feature:3246419-3246561:-1:exon
so has part: feature:3144061-3144192:-1:exon

XP_012604006.2
type: Protein
SIO_000068: ncbiprotein

position:3144061:-1
position: 3144061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3291237-3291284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3277096-3277223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3276165-3276255:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3267514-3267666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3265293-3265382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3258980-3259076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3248899-3249060:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3246419-3246561:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3144061-3144192:-1:exon

LOC109730147
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3259987..3261295)
location: region:3259987-3261295:-1
so has part: feature:3259987-3261295:-1:exon
subclass of: SO_0000010

109730147
type: Gene
SIO_000068: ncbigene

position:3259987:-1
position: 3259987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3261295:-1
position: 3261295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3259987-3261295:-1:exon

LOC109730147
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC109730147
product: neurogenic locus notch homolog protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020284606.1
SIO_010081: LOC109730147
subclass of: SO_0000673
so part of: LOC109730147
location: complement(join(3259987..3260824,3260857..3261295))
location: region:3259987-3261295:-1
so has part: feature:3260857-3261295:-1:exon
so has part: feature:3259987-3260824:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3260857-3261295:-1:exon

position:3260857:-1
position: 3260857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3259987-3260824:-1:exon

position:3260824:-1
position: 3260824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109730147
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC109730147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurogenic locus notch homolog protein 3-like
translation: MAGTRSGGRKETEAWCSALIVPSCSVHHALCPSGALSIRCSVHQALCPSGALSITCSVHQVLCPSRALSIRCSVHQALCPSRALSIRCSVHQALCPSGALSIRCSVHHALCPSRALSIRCSVHQALCPSGTLSIRCSVHQVLCPSGALSIRRSVHHVLCPSGALSIRCSVHPVLCPSRALSIRRSVHHALCPSRALSITRSVHHVLCPSRALSIRRSVHQALCPSGALSIRRSVHQVLCPSGALSITCSVHQVLCPSRALSIRCSVHQVLCPSGALSIRRSVHHALYPLRALSIVGVSVPGWGCGPSVFPSAVPAHKAPARHVIGSG
SIO_010081: LOC109730147
subclass of: SO_0000673
so part of: LOC109730147
location: complement(join(3260085..3260824,3260857..3261100))
location: region:3260085-3261100:-1
so has part: feature:3260857-3261100:-1:exon
so has part: feature:3260085-3260824:-1:exon

XP_020140195.1
type: Protein
SIO_000068: ncbiprotein

position:3260085:-1
position: 3260085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3261100:-1
position: 3261100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3260857-3261100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3260085-3260824:-1:exon

FAM19A4
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: FAM19A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4377760..4532239
location: region:4377760-4532239:1
so has part: feature:4377760-4532239:1:exon
subclass of: SO_0000010

105877352
type: Gene
SIO_000068: ncbigene

position:4377760:1
position: 4377760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4532239:1
position: 4532239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4377760-4532239:1:exon

FAM19A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FAM19A4
product: family with sequence similarity 19 member A4, C-C motif chemokine like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284531.1
SIO_010081: FAM19A4
subclass of: SO_0000673
so part of: FAM19A4
location: join(4377760..4377854,4437672..4437808,4453609..4453727,4515251..4515406,4532178..4532239)
location: region:4377760-4532239:1
so has part: feature:4377760-4377854:1:exon
so has part: feature:4437672-4437808:1:exon
so has part: feature:4453609-4453727:1:exon
so has part: feature:4515251-4515406:1:exon
so has part: feature:4532178-4532239:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4377760-4377854:1:exon

position:4377854:1
position: 4377854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4437672-4437808:1:exon

position:4437672:1
position: 4437672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4437808:1
position: 4437808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4453609-4453727:1:exon

position:4453609:1
position: 4453609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4453727:1
position: 4453727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4515251-4515406:1:exon

position:4515251:1
position: 4515251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4515406:1
position: 4515406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4532178-4532239:1:exon

position:4532178:1
position: 4532178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM19A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FAM19A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM19A4
translation: MPVPPGPPRWLLLLLLLASALLLSWELASASNPRPRGHAGHRQVQQGRCEVVAVHRCCNRNRIEERSQTVKCSCFPGQVAGTTRAQPSCVEASIVIQKWWCHMNPCLREII
SIO_010081: FAM19A4
subclass of: SO_0000673
so part of: FAM19A4
location: join(4453610..4453727,4515251..4515406,4532178..4532239)
location: region:4453610-4532239:1
so has part: feature:4453610-4453727:1:exon
so has part: feature:4515251-4515406:1:exon
so has part: feature:4532178-4532239:1:exon

XP_020140120.1
type: Protein
SIO_000068: ncbiprotein

position:4453610:1
position: 4453610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4453610-4453727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4515251-4515406:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4532178-4532239:1:exon

LOC105860670
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105860670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4940541..4963623)
location: region:4940541-4963623:-1
so has part: feature:4940541-4963623:-1:exon
subclass of: SO_0000010

105860670
type: Gene
SIO_000068: ncbigene

position:4940541:-1
position: 4940541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4963623:-1
position: 4963623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4940541-4963623:-1:exon

LOC105860670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105860670
product: bone morphogenetic protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284532.1
SIO_010081: LOC105860670
subclass of: SO_0000673
so part of: LOC105860670
location: complement(join(4940541..4941879,4952912..4953822,4959577..4959605,4962833..4963623))
location: region:4940541-4963623:-1
so has part: feature:4962833-4963623:-1:exon
so has part: feature:4959577-4959605:-1:exon
so has part: feature:4952912-4953822:-1:exon
so has part: feature:4940541-4941879:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4962833-4963623:-1:exon

position:4962833:-1
position: 4962833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4959577-4959605:-1:exon

position:4959577:-1
position: 4959577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4959605:-1
position: 4959605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4952912-4953822:-1:exon

position:4952912:-1
position: 4952912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4953822:-1
position: 4953822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4940541-4941879:-1:exon

position:4941879:-1
position: 4941879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105860670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105860670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bone morphogenetic protein 3-like
translation: MAGARGLLRLWLGCFCLSLAQGERPKQQQQQQHQQHQQREQHVPERHGAAPGDRARGGGPSPEELRPRDGASEHMLRLYDRYSGAQVARSLGPTRARGPAQKATRWRSFRGTGDRQLQRDYIPAGTPESQGLLVFNLTSLSKSESILSATLHLPFVELATAGPSCPASPGCPHQIGISAWTLTPGRNQSRLLGHLSIDPARPPGDAAAWLSKDVTQLLRKARDNGQLLLGLNVTAEGHPPPKRTSLPPEPYILVYANDAAMSEPDSVASSFWARRDVVTGASAQLDGHIGATLSLEQRRRRRRRKRSAAALLPLQNNELPGAEYHQYTRDQVWGQREPYKALQTQPPEKGRSRKKQRKGSPQKSSQTLQFDEHTLKKARRKQWTEPRNCARRYLKVDFADIGWSEWIISPKSFDAYYCSGACQFPMPKSLRPSNHATIQSIVRAVGVIPRIPEPCCVPEKMSSLSILFFDENKNVVLKVYPNMTVESCACR
SIO_010081: LOC105860670
subclass of: SO_0000673
so part of: LOC105860670
location: complement(join(4941688..4941879,4952912..4953822,4959577..4959605,4962833..4963176))
location: region:4941688-4963176:-1
so has part: feature:4962833-4963176:-1:exon
so has part: feature:4959577-4959605:-1:exon
so has part: feature:4952912-4953822:-1:exon
so has part: feature:4941688-4941879:-1:exon

XP_020140121.1
type: Protein
SIO_000068: ncbiprotein

position:4941688:-1
position: 4941688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4963176:-1
position: 4963176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4962833-4963176:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4959577-4959605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4952912-4953822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4941688-4941879:-1:exon

EOGT
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: EOGT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5068300..5095490)
location: region:5068300-5095490:-1
so has part: feature:5068300-5095490:-1:exon
subclass of: SO_0000010

105857800
type: Gene
SIO_000068: ncbigene

position:5068300:-1
position: 5068300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5095490:-1
position: 5095490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5068300-5095490:-1:exon

EOGT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: EOGT
product: EGF domain specific O-linked N-acetylglucosamine transferase
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284592.1
SIO_010081: EOGT
subclass of: SO_0000673
so part of: EOGT
location: complement(join(5068300..5068438,5069657..5069759,5076318..5076437,5084724..5084820,5086068..5086209,5086304..5086375,5087460..5087519,5094441..5094473,5095473..5095490))
location: region:5068300-5095490:-1
so has part: feature:5095473-5095490:-1:exon
so has part: feature:5094441-5094473:-1:exon
so has part: feature:5087460-5087519:-1:exon
so has part: feature:5086304-5086375:-1:exon
so has part: feature:5086068-5086209:-1:exon
so has part: feature:5084724-5084820:-1:exon
so has part: feature:5076318-5076437:-1:exon
so has part: feature:5069657-5069759:-1:exon
so has part: feature:5068300-5068438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5095473-5095490:-1:exon

position:5095473:-1
position: 5095473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5094441-5094473:-1:exon

position:5094441:-1
position: 5094441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5094473:-1
position: 5094473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5087460-5087519:-1:exon

position:5087460:-1
position: 5087460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5087519:-1
position: 5087519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5086304-5086375:-1:exon

position:5086304:-1
position: 5086304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5086375:-1
position: 5086375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5086068-5086209:-1:exon

position:5086068:-1
position: 5086068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5086209:-1
position: 5086209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5084724-5084820:-1:exon

position:5084724:-1
position: 5084724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5084820:-1
position: 5084820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5076318-5076437:-1:exon

position:5076318:-1
position: 5076318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5076437:-1
position: 5076437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5069657-5069759:-1:exon

position:5069657:-1
position: 5069657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5069759:-1
position: 5069759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5068300-5068438:-1:exon

position:5068438:-1
position: 5068438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EOGT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: EOGT
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: EGF domain-specific O-linked N-acetylglucosamine transferase
translation: MWDTSSYGYGDLFSEAWKAFTDHDVIHLKTYDSQRVCFREAVFSLLPRMRYGLFYNTPLISGCQKPRRVPAFSQHLPRNVTQEGTQVGHGAGSELRVSFHLSKSQHRKEILNVSLFSQLVNALKTVSMFEVQVVDYKYKELGFLEQLRVTHNTDVFIGMHGAGLTHLLFLPDWAAVFELYNCEDERCYLDLARLRGVHYVTWRRRSKVFPQDEGRPPDAGPHRSSPYSFDVEKFMHLVLRAATXCLLHPKWPLEERDEL
SIO_010081: EOGT
subclass of: SO_0000673
so part of: EOGT
location: complement(join(5068300..5068438,5069657..5069759,5076318..5076437,5084724..5084820,5086068..5086209,5086304..5086375,5087460..5087519,5094441..5094473,5095473..5095484))
location: region:5068300-5095484:-1
so has part: feature:5095473-5095484:-1:exon
so has part: feature:5094441-5094473:-1:exon
so has part: feature:5087460-5087519:-1:exon
so has part: feature:5086304-5086375:-1:exon
so has part: feature:5086068-5086209:-1:exon
so has part: feature:5084724-5084820:-1:exon
so has part: feature:5076318-5076437:-1:exon
so has part: feature:5069657-5069759:-1:exon
so has part: feature:5068300-5068438:-1:exon

XP_020140181.1
type: Protein
SIO_000068: ncbiprotein

position:5095484:-1
position: 5095484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5095473-5095484:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5094441-5094473:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5087460-5087519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5086304-5086375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5086068-5086209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5084724-5084820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5076318-5076437:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5069657-5069759:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5068300-5068438:-1:exon

TMF1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5147922..5171238)
location: region:5147922-5171238:-1
so has part: feature:5147922-5171238:-1:exon
subclass of: SO_0000010

105857802
type: Gene
SIO_000068: ncbigene

position:5147922:-1
position: 5147922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5171238:-1
position: 5171238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5147922-5171238:-1:exon

TMF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TMF1
product: TATA element modulatory factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012740433.2
SIO_010081: TMF1
subclass of: SO_0000673
so part of: TMF1
location: complement(join(5147922..5148185,5149853..5150005,5150297..5150398,5151278..5151370,5151925..5151994,5152863..5153055,5156413..5156569,5157727..5157819,5160462..5160618,5160741..5160907,5161140..5161282,5164756..5164861,5166127..5166253,5167265..5167368,5169877..5171238))
location: region:5147922-5171238:-1
so has part: feature:5169877-5171238:-1:exon
so has part: feature:5167265-5167368:-1:exon
so has part: feature:5166127-5166253:-1:exon
so has part: feature:5164756-5164861:-1:exon
so has part: feature:5161140-5161282:-1:exon
so has part: feature:5160741-5160907:-1:exon
so has part: feature:5160462-5160618:-1:exon
so has part: feature:5157727-5157819:-1:exon
so has part: feature:5156413-5156569:-1:exon
so has part: feature:5152863-5153055:-1:exon
so has part: feature:5151925-5151994:-1:exon
so has part: feature:5151278-5151370:-1:exon
so has part: feature:5150297-5150398:-1:exon
so has part: feature:5149853-5150005:-1:exon
so has part: feature:5147922-5148185:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5169877-5171238:-1:exon

position:5169877:-1
position: 5169877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5167265-5167368:-1:exon

position:5167265:-1
position: 5167265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5167368:-1
position: 5167368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5166127-5166253:-1:exon

position:5166127:-1
position: 5166127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5166253:-1
position: 5166253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5164756-5164861:-1:exon

position:5164756:-1
position: 5164756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5164861:-1
position: 5164861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5161140-5161282:-1:exon

position:5161140:-1
position: 5161140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5161282:-1
position: 5161282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5160741-5160907:-1:exon

position:5160741:-1
position: 5160741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5160907:-1
position: 5160907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5160462-5160618:-1:exon

position:5160462:-1
position: 5160462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5160618:-1
position: 5160618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5157727-5157819:-1:exon

position:5157727:-1
position: 5157727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5157819:-1
position: 5157819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5156413-5156569:-1:exon

position:5156413:-1
position: 5156413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5156569:-1
position: 5156569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5152863-5153055:-1:exon

position:5152863:-1
position: 5152863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5153055:-1
position: 5153055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5151925-5151994:-1:exon

position:5151925:-1
position: 5151925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5151994:-1
position: 5151994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5151278-5151370:-1:exon

position:5151278:-1
position: 5151278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5151370:-1
position: 5151370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5150297-5150398:-1:exon

position:5150297:-1
position: 5150297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5150398:-1
position: 5150398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5149853-5150005:-1:exon

position:5149853:-1
position: 5149853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5150005:-1
position: 5150005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5147922-5148185:-1:exon

position:5148185:-1
position: 5148185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TATA element modulatory factor
translation: MCLIYIYMYVFIQGVSPPASGGWDTSTWGLESSAEPRSPPAASPTAITKPVRRTVVDESENFFSAFLSPADAQTVPKSPVVSKPPAKSQRPEGEAQGPAQGPSPAGQPRTPGAAGSRAKDSPVRVPGGSLAAGAPPPGTEGARAGPAGQESDTGEPGARLDASERPASATAVTESAPGVPTRPAAAETKGPAPAAGERRLEDRQSDTPSPPASSFSSGTSTTSDIEVLDHESVMSESSASSRQEAADSRPGLHLMQTSFQLLSASACPEDSRSDGFQRLAESCGSSDAFERIDSLSVQSLDSRSVSELNSDDELPARGLAVAPAAGPASPRAEVADSAGGRSAEAEDETLTVPTEDADMEESGRSATPVNCEQPDDVLVVPAPVHGAQVHGAQVHGAQVHGAQVHGAQVHGAQVHGAQVHGALAVPEPGAARPGEAAQSQPGAPSEKEHVCKAVEFLNEKLEKREAQLLSLSKEKALLEEAYDNLKDEMFRVKEESSSISSLKDEFTQRIAEAEKKVQLACKERDAAKKEIKNIKEELATRLNSSETADLLKEKDEQIQGLMEEGEKLSKQQLHNSNIIKKLRAKDKENENIITKLNKKVKELEEELQHLKQVLDGKEEVEKQHRENIKKLNSVVGRQEKDLGKLQADLDGLEEKNRSIQAALDSAYKELTDLHKANAAKDSEAQEAALSREMKAREELSAALEKAQEEARQQQETLAIQVGDLRLALQRAEQAAARKEDYLRHEISELQQRLQEAENRNQELSQSVSSTTRPLLRQIENLQATLGSQTSSWEKLEKNLSDRLGESQTLLAAAVERERAATEELLANKIQMSSVESQNSLLRQENTRFQAQLESERNRLRKLEDENNRYQVELENLKDEYVRTLEETRKEKTLLNSQLEMERMKVEQERKKAIFTQEAIKEKERKPFSVSSTPTLSRSSSISGVDVAGLQTSVLSQDESQDHAFGPMSASANGSNLYDAVRMGAGSSIIENLQSQLKLREGEITHLQLEIGNLEKTRSVMAEELVKLTNQNDELEERVKEIPKLRTQLRVSILHLRMSLRYLNPVTLNVKVLVYVKCMYVCFSDFFVLN
SIO_010081: TMF1
subclass of: SO_0000673
so part of: TMF1
location: complement(join(5147937..5148185,5149853..5150005,5150297..5150398,5151278..5151370,5151925..5151994,5152863..5153055,5156413..5156569,5157727..5157819,5160462..5160618,5160741..5160907,5161140..5161282,5164756..5164861,5166127..5166253,5167265..5167368,5169877..5171232))
location: region:5147937-5171232:-1
so has part: feature:5169877-5171232:-1:exon
so has part: feature:5167265-5167368:-1:exon
so has part: feature:5166127-5166253:-1:exon
so has part: feature:5164756-5164861:-1:exon
so has part: feature:5161140-5161282:-1:exon
so has part: feature:5160741-5160907:-1:exon
so has part: feature:5160462-5160618:-1:exon
so has part: feature:5157727-5157819:-1:exon
so has part: feature:5156413-5156569:-1:exon
so has part: feature:5152863-5153055:-1:exon
so has part: feature:5151925-5151994:-1:exon
so has part: feature:5151278-5151370:-1:exon
so has part: feature:5150297-5150398:-1:exon
so has part: feature:5149853-5150005:-1:exon
so has part: feature:5147937-5148185:-1:exon

XP_012595887.1
type: Protein
SIO_000068: ncbiprotein

position:5147937:-1
position: 5147937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5171232:-1
position: 5171232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5169877-5171232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5167265-5167368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5166127-5166253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5164756-5164861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5161140-5161282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5160741-5160907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5160462-5160618:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5157727-5157819:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5156413-5156569:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5152863-5153055:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5151925-5151994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5151278-5151370:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5150297-5150398:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5149853-5150005:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5147937-5148185:-1:exon

UBA3
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: UBA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5178241..5204821)
location: region:5178241-5204821:-1
so has part: feature:5178241-5204821:-1:exon
subclass of: SO_0000010

105857801
type: Gene
SIO_000068: ncbigene

position:5178241:-1
position: 5178241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5204821:-1
position: 5204821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5178241-5204821:-1:exon

UBA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: UBA3
product: ubiquitin like modifier activating enzyme 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 140 ESTs, 16 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020284579.1
SIO_010081: UBA3
subclass of: SO_0000673
so part of: UBA3
location: complement(join(5178241..5178718,5179061..5179115,5179209..5179272,5179724..5179824,5180178..5180259,5180345..5180381,5180877..5180930,5186524..5186637,5186778..5186880,5187592..5187747,5188064..5188128,5189007..5189050,5192123..5192203,5194638..5194720,5198816..5198896,5201045..5201165,5204785..5204821))
location: region:5178241-5204821:-1
so has part: feature:5204785-5204821:-1:exon
so has part: feature:5201045-5201165:-1:exon
so has part: feature:5198816-5198896:-1:exon
so has part: feature:5194638-5194720:-1:exon
so has part: feature:5192123-5192203:-1:exon
so has part: feature:5189007-5189050:-1:exon
so has part: feature:5188064-5188128:-1:exon
so has part: feature:5187592-5187747:-1:exon
so has part: feature:5186778-5186880:-1:exon
so has part: feature:5186524-5186637:-1:exon
so has part: feature:5180877-5180930:-1:exon
so has part: feature:5180345-5180381:-1:exon
so has part: feature:5180178-5180259:-1:exon
so has part: feature:5179724-5179824:-1:exon
so has part: feature:5179209-5179272:-1:exon
so has part: feature:5179061-5179115:-1:exon
so has part: feature:5178241-5178718:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5204785-5204821:-1:exon

position:5204785:-1
position: 5204785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5201045-5201165:-1:exon

position:5201045:-1
position: 5201045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5201165:-1
position: 5201165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5198816-5198896:-1:exon

position:5198816:-1
position: 5198816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5198896:-1
position: 5198896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5194638-5194720:-1:exon

position:5194638:-1
position: 5194638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5194720:-1
position: 5194720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5192123-5192203:-1:exon

position:5192123:-1
position: 5192123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5192203:-1
position: 5192203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5189007-5189050:-1:exon

position:5189007:-1
position: 5189007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5189050:-1
position: 5189050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5188064-5188128:-1:exon

position:5188064:-1
position: 5188064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5188128:-1
position: 5188128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5187592-5187747:-1:exon

position:5187592:-1
position: 5187592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5187747:-1
position: 5187747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5186778-5186880:-1:exon

position:5186778:-1
position: 5186778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5186880:-1
position: 5186880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5186524-5186637:-1:exon

position:5186524:-1
position: 5186524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5186637:-1
position: 5186637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5180877-5180930:-1:exon

position:5180877:-1
position: 5180877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5180930:-1
position: 5180930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5180345-5180381:-1:exon

position:5180345:-1
position: 5180345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5180381:-1
position: 5180381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5180178-5180259:-1:exon

position:5180178:-1
position: 5180178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5180259:-1
position: 5180259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5179724-5179824:-1:exon

position:5179724:-1
position: 5179724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5179824:-1
position: 5179824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5179209-5179272:-1:exon

position:5179209:-1
position: 5179209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5179272:-1
position: 5179272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5179061-5179115:-1:exon

position:5179061:-1
position: 5179061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5179115:-1
position: 5179115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5178241-5178718:-1:exon

position:5178718:-1
position: 5178718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: UBA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD8-activating enzyme E1 catalytic subunit
translation: MAVDVGCGDTGDWEGRWDHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDVGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACVECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQNSLERASLYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGRNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS
SIO_010081: UBA3
subclass of: SO_0000673
so part of: UBA3
location: complement(join(5178630..5178718,5179061..5179115,5179209..5179272,5179724..5179824,5180178..5180259,5180345..5180381,5180877..5180930,5186524..5186637,5186778..5186880,5187592..5187747,5188064..5188128,5189007..5189050,5192123..5192203,5194638..5194720,5198816..5198896,5201045..5201164))
location: region:5178630-5201164:-1
so has part: feature:5201045-5201164:-1:exon
so has part: feature:5198816-5198896:-1:exon
so has part: feature:5194638-5194720:-1:exon
so has part: feature:5192123-5192203:-1:exon
so has part: feature:5189007-5189050:-1:exon
so has part: feature:5188064-5188128:-1:exon
so has part: feature:5187592-5187747:-1:exon
so has part: feature:5186778-5186880:-1:exon
so has part: feature:5186524-5186637:-1:exon
so has part: feature:5180877-5180930:-1:exon
so has part: feature:5180345-5180381:-1:exon
so has part: feature:5180178-5180259:-1:exon
so has part: feature:5179724-5179824:-1:exon
so has part: feature:5179209-5179272:-1:exon
so has part: feature:5179061-5179115:-1:exon
so has part: feature:5178630-5178718:-1:exon

XP_020140168.1
type: Protein
SIO_000068: ncbiprotein

position:5178630:-1
position: 5178630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5201164:-1
position: 5201164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5201045-5201164:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5198816-5198896:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5194638-5194720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5192123-5192203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5189007-5189050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5188064-5188128:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5187592-5187747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5186778-5186880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5186524-5186637:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5180877-5180930:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5180345-5180381:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5180178-5180259:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5179724-5179824:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5179209-5179272:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5179061-5179115:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5178630-5178718:-1:exon

ARL6IP5
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: ARL6IP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5217275..5260595
location: region:5217275-5260595:1
so has part: feature:5217275-5260595:1:exon
subclass of: SO_0000010

109730140
type: Gene
SIO_000068: ncbigene

position:5217275:1
position: 5217275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5260595:1
position: 5260595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5217275-5260595:1:exon

ARL6IP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARL6IP5
product: ADP ribosylation factor like GTPase 6 interacting protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_020284591.1
SIO_010081: ARL6IP5
subclass of: SO_0000673
so part of: ARL6IP5
location: join(5217275..5217599,5259619..5260595)
location: region:5217275-5260595:1
so has part: feature:5217275-5217599:1:exon
so has part: feature:5259619-5260595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5217275-5217599:1:exon

position:5217599:1
position: 5217599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5259619-5260595:1:exon

position:5259619:1
position: 5259619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARL6IP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARL6IP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRA1 family protein 3
translation: MDVNLAPLRAWDDFFPGSDRFARPDFRDISKWNNRVVSNLLYYQTNYLVVAAMMVSVVGDVHPRLAEAPEPQEQAGEQNGGAGGEADAHGHRPERAGAAGRQLGRGGRLHQQGQGMKPARPGTGRSSGNRAAVCSVQAHLLLVRSK
SIO_010081: ARL6IP5
subclass of: SO_0000673
so part of: ARL6IP5
location: join(5217424..5217599,5259619..5259883)
location: region:5217424-5259883:1
so has part: feature:5217424-5217599:1:exon
so has part: feature:5259619-5259883:1:exon

XP_020140180.1
type: Protein
SIO_000068: ncbiprotein

position:5217424:1
position: 5217424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5259883:1
position: 5259883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5217424-5217599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5259619-5259883:1:exon

LMOD3
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LMOD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5272744..5278537)
location: region:5272744-5278537:-1
so has part: feature:5272744-5278537:-1:exon
subclass of: SO_0000010

105868078
type: Gene
SIO_000068: ncbigene

position:5272744:-1
position: 5272744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5278537:-1
position: 5278537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5272744-5278537:-1:exon

LMOD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LMOD3
product: leiomodin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012758600.2
SIO_010081: LMOD3
subclass of: SO_0000673
so part of: LMOD3
location: complement(join(5272744..5273450,5273613..5273748,5277998..5278537))
location: region:5272744-5278537:-1
so has part: feature:5277998-5278537:-1:exon
so has part: feature:5273613-5273748:-1:exon
so has part: feature:5272744-5273450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5277998-5278537:-1:exon

position:5277998:-1
position: 5277998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5273613-5273748:-1:exon

position:5273613:-1
position: 5273613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5273748:-1
position: 5273748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5272744-5273450:-1:exon

position:5273450:-1
position: 5273450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMOD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LMOD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leiomodin-3
translation: MMSEHSRNPDGEEAVPGEEIDEDEILASLSPEELRELQSEMEVMAPDPGLPAGMVQKDQTDRPPTGSFDHRSLVDCMYWEKASRRMLEDERVPVTFVTAEEIAREQQGETHKGNKNTFQFLKQKLNDETAASKRESRGSDGVRETDDEGGEDEEEEDDGGGEDDGEEGDGKQRAEEGEAKEQSGNCENSRRDPGAATGASRPQRDGPGGREGKVSKLDPQRLALDAGFLRAGGGPAGGRADLDGSLRRVRADDPGLRELNLNNMENVPRQALLDLVGALRRNRHVRALSLANVGADDAVAFAVAHMLRENRSLASLNLESNRIGGRGLVAVVRCLQFNETLTELRFHNQRHLLGQQAEAVLKADVRGSQCQLCAAGMVLF
SIO_010081: LMOD3
subclass of: SO_0000673
so part of: LMOD3
location: complement(join(5272744..5273450,5273613..5273748,5277998..5278297))
location: region:5272744-5278297:-1
so has part: feature:5277998-5278297:-1:exon
so has part: feature:5273613-5273748:-1:exon
so has part: feature:5272744-5273450:-1:exon

XP_012614054.1
type: Protein
SIO_000068: ncbiprotein

position:5278297:-1
position: 5278297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5277998-5278297:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5273613-5273748:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5272744-5273450:-1:exon

LOC105870533
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105870533
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5300356..5306675)
location: region:5300356-5306675:-1
so has part: feature:5300356-5306675:-1:exon

105870533
type: Gene
SIO_000068: ncbigene

position:5300356:-1
position: 5300356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5306675:-1
position: 5306675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5300356-5306675:-1:exon

LOC105870533
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105870533
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105870533
subclass of: SO_0000673
so part of: LOC105870533
location: complement(5300356..5301052)
location: region:5300356-5301052:-1
so has part: feature:5300356-5301052:-1:exon

position:5301052:-1
position: 5301052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5300356-5301052:-1:exon

LOC105870533
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105870533
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105870533
subclass of: SO_0000673
so part of: LOC105870533
location: complement(5301579..5301652)
location: region:5301579-5301652:-1
so has part: feature:5301579-5301652:-1:exon

position:5301579:-1
position: 5301579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5301652:-1
position: 5301652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5301579-5301652:-1:exon

LOC105870533
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105870533
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 32% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105870533
subclass of: SO_0000673
so part of: LOC105870533
location: complement(5306604..5306675)
location: region:5306604-5306675:-1
so has part: feature:5306604-5306675:-1:exon

position:5306604:-1
position: 5306604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5306604-5306675:-1:exon

FRMD4B
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: FRMD4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5376289..5455491)
location: region:5376289-5455491:-1
so has part: feature:5376289-5455491:-1:exon
subclass of: SO_0000010

105858063
type: Gene
SIO_000068: ncbigene

position:5376289:-1
position: 5376289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5455491:-1
position: 5455491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5376289-5455491:-1:exon

FRMD4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FRMD4B
product: FERM domain containing 4B
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284533.1
SIO_010081: FRMD4B
subclass of: SO_0000673
so part of: FRMD4B
location: complement(join(5376289..5376611,5381055..5381190,5383480..5383962,5385880..5386027,5390351..5390407,5392995..5393223,5413473..5413592,5413670..5413803,5414559..5414700,5415389..5415461,5418062..5418138,5452728..5452814,5454934..5455491))
location: region:5376289-5455491:-1
so has part: feature:5454934-5455491:-1:exon
so has part: feature:5452728-5452814:-1:exon
so has part: feature:5418062-5418138:-1:exon
so has part: feature:5415389-5415461:-1:exon
so has part: feature:5414559-5414700:-1:exon
so has part: feature:5413670-5413803:-1:exon
so has part: feature:5413473-5413592:-1:exon
so has part: feature:5392995-5393223:-1:exon
so has part: feature:5390351-5390407:-1:exon
so has part: feature:5385880-5386027:-1:exon
so has part: feature:5383480-5383962:-1:exon
so has part: feature:5381055-5381190:-1:exon
so has part: feature:5376289-5376611:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5454934-5455491:-1:exon

position:5454934:-1
position: 5454934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5452728-5452814:-1:exon

position:5452728:-1
position: 5452728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5452814:-1
position: 5452814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5418062-5418138:-1:exon

position:5418062:-1
position: 5418062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5418138:-1
position: 5418138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5415389-5415461:-1:exon

position:5415389:-1
position: 5415389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5415461:-1
position: 5415461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5414559-5414700:-1:exon

position:5414559:-1
position: 5414559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5414700:-1
position: 5414700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5413670-5413803:-1:exon

position:5413670:-1
position: 5413670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5413803:-1
position: 5413803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5413473-5413592:-1:exon

position:5413473:-1
position: 5413473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5413592:-1
position: 5413592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5392995-5393223:-1:exon

position:5392995:-1
position: 5392995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5393223:-1
position: 5393223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5390351-5390407:-1:exon

position:5390351:-1
position: 5390351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5390407:-1
position: 5390407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5385880-5386027:-1:exon

position:5385880:-1
position: 5385880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5386027:-1
position: 5386027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5383480-5383962:-1:exon

position:5383480:-1
position: 5383480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5383962:-1
position: 5383962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5381055-5381190:-1:exon

position:5381055:-1
position: 5381055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5381190:-1
position: 5381190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5376289-5376611:-1:exon

position:5376611:-1
position: 5376611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FRMD4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FRMD4B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: FERM domain-containing protein 4B
translation: MKIVEALPTYGVHYFAVKDKQGLPWWLGISYKGIGQYDLQDKVKPRKLFQWKQLENLYFREKKFAVEVHDPQSALTGSRTCMLQPLLSRASSDSATAAKIPSARSLDDIAMDLTETGTQRVSKLVALEAKSQFIMASNGSLNSSGSQDSEVSEEQKREKVLELKERERLLQEKLLGKFEELRRVCLREAELTGQVPREYPLRAGERPPQARRRVGAAFRLDHSLLPGDQDPALQGLESSFLIQQKLVEAAKKLASEPDLCKTVKKKRKQDYTDAVRKLQEIENSINEYRIRGGKKPSQKATVILPEDIIPSESSSLSDTSTYDDPSDTFALAGQRSSSVPHSPRILPPRSLGIERVPFRKSPDSEQFVDARQPGLPARAEAAPGRHAMPDLARGGGLAGRTETPGPGYCAPASGAPCRGGHLYESDKEGRYSLHPPRRASAPLHGLGLHEDPAARAPHNPYATLRAPRAAPAPQRAARSAHKALVAEHLRGWYQRASGHKGQGXSPQAGLDWDDRATQRGPQVPRPPGGRASLXXXVSSINASGNWRTQLTIGLSEYEALAHSSYASCYGNVYSLLPSPSRQYPDVGQLDGADGDPVEAGLEEDSEQRLYWHEDSKPGTLV
SIO_010081: FRMD4B
subclass of: SO_0000673
so part of: FRMD4B
location: complement(join(5376488..5376611,5381055..5381190,5383480..5383962,5385880..5386027,5390351..5390407,5392995..5393223,5413473..5413592,5413670..5413803,5414559..5414700,5415389..5415461,5418062..5418138,5452728..5452814,5454934..5454987))
location: region:5376488-5454987:-1
so has part: feature:5454934-5454987:-1:exon
so has part: feature:5452728-5452814:-1:exon
so has part: feature:5418062-5418138:-1:exon
so has part: feature:5415389-5415461:-1:exon
so has part: feature:5414559-5414700:-1:exon
so has part: feature:5413670-5413803:-1:exon
so has part: feature:5413473-5413592:-1:exon
so has part: feature:5392995-5393223:-1:exon
so has part: feature:5390351-5390407:-1:exon
so has part: feature:5385880-5386027:-1:exon
so has part: feature:5383480-5383962:-1:exon
so has part: feature:5381055-5381190:-1:exon
so has part: feature:5376488-5376611:-1:exon

XP_020140122.1
type: Protein
SIO_000068: ncbiprotein

position:5376488:-1
position: 5376488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5454987:-1
position: 5454987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5454934-5454987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5452728-5452814:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5418062-5418138:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5415389-5415461:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5414559-5414700:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5413670-5413803:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5413473-5413592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5392995-5393223:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5390351-5390407:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5385880-5386027:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5383480-5383962:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5381055-5381190:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5376488-5376611:-1:exon

LOC105864510
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105864510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5498836..5620080)
location: region:5498836-5620080:-1
so has part: feature:5498836-5620080:-1:exon
subclass of: SO_0000010

105864510
type: Gene
SIO_000068: ncbigene

position:5498836:-1
position: 5498836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5620080:-1
position: 5620080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5498836-5620080:-1:exon

LOC105864510
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105864510
product: FERM domain-containing protein 4B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284534.1
SIO_010081: LOC105864510
subclass of: SO_0000673
so part of: LOC105864510
location: complement(join(5498836..5499425,5502368..5502462,5557393..5557458,5604377..5604773,5619995..5620080))
location: region:5498836-5620080:-1
so has part: feature:5619995-5620080:-1:exon
so has part: feature:5604377-5604773:-1:exon
so has part: feature:5557393-5557458:-1:exon
so has part: feature:5502368-5502462:-1:exon
so has part: feature:5498836-5499425:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5619995-5620080:-1:exon

position:5619995:-1
position: 5619995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5604377-5604773:-1:exon

position:5604377:-1
position: 5604377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5604773:-1
position: 5604773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5557393-5557458:-1:exon

position:5557393:-1
position: 5557393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5557458:-1
position: 5557458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5502368-5502462:-1:exon

position:5502368:-1
position: 5502368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5502462:-1
position: 5502462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5498836-5499425:-1:exon

position:5499425:-1
position: 5499425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105864510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105864510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 4B-like
translation: MFAAAQESHNSKGGAEQAVPQRWESEPFWAPGGRGGEVRAVPAPQGSRRAGRGGPHATGRSGWLARAQPRACRAGRRDAVTAQSGAGRSRAAGGAGASARGVPAEGGMASGCTCGVEDLLFGGGRLAWGLAAAALRRWSGERLRACGQALRAWCGLRAVYQMTEGRHCQVHLLDDRRLELLVQPKLLSRELLDLVASHFNLKEKEYFGITFTDDSGQQDWLQLDHRVLDHDLPRKPGPAILHFAVRYVSVDASLFIYLFPLFVGFFFFFVSLNIFGDQRE
SIO_010081: LOC105864510
subclass of: SO_0000673
so part of: LOC105864510
location: complement(join(5499227..5499425,5502368..5502462,5557393..5557458,5604377..5604773,5619995..5620080))
location: region:5499227-5620080:-1
so has part: feature:5619995-5620080:-1:exon
so has part: feature:5604377-5604773:-1:exon
so has part: feature:5557393-5557458:-1:exon
so has part: feature:5502368-5502462:-1:exon
so has part: feature:5499227-5499425:-1:exon

XP_020140123.1
type: Protein
SIO_000068: ncbiprotein

position:5499227:-1
position: 5499227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5619995-5620080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5604377-5604773:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5557393-5557458:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5502368-5502462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5499227-5499425:-1:exon

LOC105863716
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105863716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5527655..5549612)
location: region:5527655-5549612:-1
so has part: feature:5527655-5549612:-1:exon
subclass of: SO_0000011

105863716
type: Gene
SIO_000068: ncbigene

position:5527655:-1
position: 5527655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5549612:-1
position: 5549612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5527655-5549612:-1:exon

LOC105863716
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105863716
product: uncharacterized LOC105863716
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_001150594.2
SIO_010081: LOC105863716
subclass of: SO_0000673
so part of: LOC105863716
location: complement(join(5527655..5527986,5528989..5529045,5549509..5549612))
location: region:5527655-5549612:-1
so has part: feature:5549509-5549612:-1:exon
so has part: feature:5528989-5529045:-1:exon
so has part: feature:5527655-5527986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5549509-5549612:-1:exon

position:5549509:-1
position: 5549509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5528989-5529045:-1:exon

position:5528989:-1
position: 5528989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5529045:-1
position: 5529045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5527655-5527986:-1:exon

position:5527986:-1
position: 5527986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105863718
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105863718
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5577818..5578439)
location: region:5577818-5578439:-1
so has part: feature:5577818-5578439:-1:exon

105863718
type: Gene
SIO_000068: ncbigene

position:5577818:-1
position: 5577818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5578439:-1
position: 5578439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5577818-5578439:-1:exon

LOC105863718
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105863718
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105863718
subclass of: SO_0000673
so part of: LOC105863718
location: complement(5577818..5578439)
location: region:5577818-5578439:-1
so has part: feature:5577818-5578439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5577818-5578439:-1:exon

LOC109730130
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5679216..5714554)
location: region:5679216-5714554:-1
so has part: feature:5679216-5714554:-1:exon

109730130
type: Gene
SIO_000068: ncbigene

position:5679216:-1
position: 5679216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5714554:-1
position: 5714554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5679216-5714554:-1:exon

LOC109730130
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC109730130
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 70% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109730130
subclass of: SO_0000673
so part of: LOC109730130
location: complement(5679216..5680136)
location: region:5679216-5680136:-1
so has part: feature:5679216-5680136:-1:exon

position:5680136:-1
position: 5680136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5679216-5680136:-1:exon

LOC109730130
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC109730130
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 70% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109730130
subclass of: SO_0000673
so part of: LOC109730130
location: complement(5680909..5680963)
location: region:5680909-5680963:-1
so has part: feature:5680909-5680963:-1:exon

position:5680909:-1
position: 5680909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5680963:-1
position: 5680963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5680909-5680963:-1:exon

LOC109730130
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC109730130
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 70% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109730130
subclass of: SO_0000673
so part of: LOC109730130
location: complement(5714393..5714554)
location: region:5714393-5714554:-1
so has part: feature:5714393-5714554:-1:exon

position:5714393:-1
position: 5714393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5714393-5714554:-1:exon

LOC105868190
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105868190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5904906..5953888)
location: region:5904906-5953888:-1
so has part: feature:5904906-5953888:-1:exon
subclass of: SO_0000010

105868190
type: Gene
SIO_000068: ncbigene

position:5904906:-1
position: 5904906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5953888:-1
position: 5953888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5904906-5953888:-1:exon

LOC105868190
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105868190
product: olfactory receptor 1361-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_020284535.1
SIO_010081: LOC105868190
subclass of: SO_0000673
so part of: LOC105868190
location: complement(join(5904906..5905790,5953772..5953888))
location: region:5904906-5953888:-1
so has part: feature:5953772-5953888:-1:exon
so has part: feature:5904906-5905790:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5953772-5953888:-1:exon

position:5953772:-1
position: 5953772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5904906-5905790:-1:exon

position:5905790:-1
position: 5905790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105868190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105868190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 1361-like
translation: MRTVTEQLPRPGVASGGSQPFEEGCWLRSPVDKPALSGQPDGRTRFLFGLFFWMYLVILSGNTLIVLAISCDRRLHTPMYFFLANLSCVDIFFATVTIPKMLANRMSGSKSISYVGCMTQIYFFVAFGNMDGFLLSVMAYDRYVAVCRPLHYAMRMRPSLCVLLVAVSWAITHLHALLHTLLIARLAFCSNNAVHHFFCDPEALLKLACSDTSLNDLVAFTVSGLVFMAPFSCIVVSYTCIFSTVLRSPSVRGIRKALSTCGSHLAVVALFYGAVLGVYMRPSSSYSVQDTVATVVLTVLTPLVNPFIYSLRNQDVKGAIRRLSFRGLVPSRF
SIO_010081: LOC105868190
subclass of: SO_0000673
so part of: LOC105868190
location: complement(join(5904906..5905790,5953772..5953888))
location: region:5904906-5953888:-1
so has part: feature:5953772-5953888:-1:exon
so has part: feature:5904906-5905790:-1:exon

XP_020140124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5953772-5953888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5904906-5905790:-1:exon

PROP1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: PROP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5992378..5997438
location: region:5992378-5997438:1
so has part: feature:5992378-5997438:1:exon
subclass of: SO_0000010

105856701
type: Gene
SIO_000068: ncbigene

position:5992378:1
position: 5992378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5997438:1
position: 5997438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5992378-5997438:1:exon

PROP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PROP1
product: PROP paired-like homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012738560.1
SIO_010081: PROP1
subclass of: SO_0000673
so part of: PROP1
location: join(5992378..5993410,5994530..5994721,5996215..5996485,5997404..5997438)
location: region:5992378-5997438:1
so has part: feature:5992378-5993410:1:exon
so has part: feature:5994530-5994721:1:exon
so has part: feature:5996215-5996485:1:exon
so has part: feature:5997404-5997438:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5992378-5993410:1:exon

position:5993410:1
position: 5993410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5994530-5994721:1:exon

position:5994530:1
position: 5994530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5994721:1
position: 5994721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5996215-5996485:1:exon

position:5996215:1
position: 5996215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5996485:1
position: 5996485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5997404-5997438:1:exon

position:5997404:1
position: 5997404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PROP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PROP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein prophet of Pit-1
translation: MEAEGRSQQGKPEKGPVCTSLSPETCLAAGTLPSRTTTGECVPGLGECVSGLGECPCRRPRLCPQGAQRGRQPSRRHRTNFSPGQLEQLESAFGRNQYPDIWAREGLAQDTGLSEARIQVWFQNRRAKQRKHERSLLQPLAHLAPAAFSGFLPESPACPYSYTTPPPPVPYLPHPYNHALPSQPPPGGSFVLPHQPEDWYATLHLASTRFSSRHRINSSP
SIO_010081: PROP1
subclass of: SO_0000673
so part of: PROP1
location: join(5993246..5993410,5994530..5994721,5996215..5996485,5997404..5997438)
location: region:5993246-5997438:1
so has part: feature:5993246-5993410:1:exon
so has part: feature:5994530-5994721:1:exon
so has part: feature:5996215-5996485:1:exon
so has part: feature:5997404-5997438:1:exon

XP_012594014.1
type: Protein
SIO_000068: ncbiprotein

position:5993246:1
position: 5993246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5993246-5993410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5994530-5994721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5996215-5996485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5997404-5997438:1:exon

LOC105856696
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105856696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6006427..6014432
location: region:6006427-6014432:1
so has part: feature:6006427-6014432:1:exon
subclass of: SO_0000010

105856696
type: Gene
SIO_000068: ncbigene

position:6006427:1
position: 6006427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6014432:1
position: 6014432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6006427-6014432:1:exon

LOC105856696
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105856696
product: zinc finger protein 354B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 15 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020284586.1
SIO_010081: LOC105856696
subclass of: SO_0000673
so part of: LOC105856696
location: join(6006427..6006525,6006970..6007081,6007373..6007455,6009953..6010079,6011394..6011489,6012713..6014432)
location: region:6006427-6014432:1
so has part: feature:6006427-6006525:1:exon
so has part: feature:6006970-6007081:1:exon
so has part: feature:6007373-6007455:1:exon
so has part: feature:6009953-6010079:1:exon
so has part: feature:6011394-6011489:1:exon
so has part: feature:6012713-6014432:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6006427-6006525:1:exon

position:6006525:1
position: 6006525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6006970-6007081:1:exon

position:6006970:1
position: 6006970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6007081:1
position: 6007081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6007373-6007455:1:exon

position:6007373:1
position: 6007373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6007455:1
position: 6007455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6009953-6010079:1:exon

position:6009953:1
position: 6009953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6010079:1
position: 6010079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6011394-6011489:1:exon

position:6011394:1
position: 6011394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6011489:1
position: 6011489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6012713-6014432:1:exon

position:6012713:1
position: 6012713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105856696
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105856696
product: zinc finger protein 354B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 15 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_012738556.1
SIO_010081: LOC105856696
subclass of: SO_0000673
so part of: LOC105856696
location: join(6006444..6006525,6006970..6007081,6009953..6010079,6011394..6011489,6012713..6014432)
location: region:6006444-6014432:1
so has part: feature:6006444-6006525:1:exon
so has part: feature:6006970-6007081:1:exon
so has part: feature:6009953-6010079:1:exon
so has part: feature:6011394-6011489:1:exon
so has part: feature:6012713-6014432:1:exon

position:6006444:1
position: 6006444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6006444-6006525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6006970-6007081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6009953-6010079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6011394-6011489:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6012713-6014432:1:exon

LOC105856696
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105856696
product: zinc finger protein 354B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 15 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_012738557.1
SIO_010081: LOC105856696
subclass of: SO_0000673
so part of: LOC105856696
location: join(6006444..6006525,6006970..6007060,6009953..6010079,6011394..6011489,6012713..6014432)
location: region:6006444-6014432:1
so has part: feature:6006444-6006525:1:exon
so has part: feature:6006970-6007060:1:exon
so has part: feature:6009953-6010079:1:exon
so has part: feature:6011394-6011489:1:exon
so has part: feature:6012713-6014432:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6006444-6006525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6006970-6007060:1:exon

position:6007060:1
position: 6007060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6009953-6010079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6011394-6011489:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6012713-6014432:1:exon

LOC105856696
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105856696
product: zinc finger protein 354B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 15 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_020284585.1
SIO_010081: LOC105856696
subclass of: SO_0000673
so part of: LOC105856696
location: join(6006769..6007060,6007373..6007455,6009953..6010079,6011394..6011489,6012713..6014432)
location: region:6006769-6014432:1
so has part: feature:6006769-6007060:1:exon
so has part: feature:6007373-6007455:1:exon
so has part: feature:6009953-6010079:1:exon
so has part: feature:6011394-6011489:1:exon
so has part: feature:6012713-6014432:1:exon

position:6006769:1
position: 6006769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6006769-6007060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6007373-6007455:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6009953-6010079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6011394-6011489:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6012713-6014432:1:exon

LOC105856696
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105856696
product: zinc finger protein 354B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 15 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012738555.1
SIO_010081: LOC105856696
subclass of: SO_0000673
so part of: LOC105856696
location: join(6006991..6007455,6009953..6010079,6011394..6011489,6012713..6014432)
location: region:6006991-6014432:1
so has part: feature:6006991-6007455:1:exon
so has part: feature:6009953-6010079:1:exon
so has part: feature:6011394-6011489:1:exon
so has part: feature:6012713-6014432:1:exon

position:6006991:1
position: 6006991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6006991-6007455:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6009953-6010079:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6011394-6011489:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6012713-6014432:1:exon

LOC105856696
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105856696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 354B isoform X2
translation: MAAAQRKATSQVRRATSQVSLVFEDVAVLFSRDEWRKLDPSQRKLYRDVMLENYSNLLSLGLPFTKPRVISLLQQGEDPWKVERESPGRPSPGFKSSPKTTKSTQTQDSFQELIRKRLKRDEPWDFILAKPCINEDRLKKQDKTKSLQIISITHTKILTVGGSHKNNEFSQNFNLKSVFIKQQRFAIEKTSSTYEIQRNNFKQNSNLHNQPKIKTAEKHYKCNICEKAFIHNSSLRKHQKNHTGEKLFKCKECLKAFSQSSALIQHQRTHTGEKPYICKECGKAFSHSASLCKHLRTHTVEKSYRCKECGKSFSKRSGLFIHQKIHARDNPHKYNPGRKPSSCSTSLSGCQRIHSRKKSYLCNECGNAFKSSSSLRYHQRIHTGEKPFKCSECGRAFSQSASLIQHERIHTGEKPYRCNQCGKGFTSISRLNRHRIIHTGEKLYNCNECGKALSSHSTLIIHERIHTGEKPCKCKVCGKAFRQSSALIQHQRMHTGERPYKCNDCGKTFRCNSSLSNHQRIHTGEKPYRCLECGISFGQSAALIQHQRIHTGEKPFKCNTCGKTFRQSSSLIAHQRIHTGEKPYECNACGKLFSQRSSLTNHYKIHIEEDSLKTDLHV
SIO_010081: LOC105856696
subclass of: SO_0000673
so part of: LOC105856696
location: join(6007028..6007081,6009953..6010079,6011394..6011489,6012713..6014292)
location: region:6007028-6014292:1
so has part: feature:6007028-6007081:1:exon
so has part: feature:6009953-6010079:1:exon
so has part: feature:6011394-6011489:1:exon
so has part: feature:6012713-6014292:1:exon

XP_012594010.1
type: Protein
SIO_000068: ncbiprotein

position:6007028:1
position: 6007028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6014292:1
position: 6014292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6007028-6007081:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6009953-6010079:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6011394-6011489:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6012713-6014292:1:exon

LOC105856696
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105856696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 354B isoform X3
translation: MAAAQRKATSQVSLVFEDVAVLFSRDEWRKLDPSQRKLYRDVMLENYSNLLSLGLPFTKPRVISLLQQGEDPWKVERESPGRPSPGFKSSPKTTKSTQTQDSFQELIRKRLKRDEPWDFILAKPCINEDRLKKQDKTKSLQIISITHTKILTVGGSHKNNEFSQNFNLKSVFIKQQRFAIEKTSSTYEIQRNNFKQNSNLHNQPKIKTAEKHYKCNICEKAFIHNSSLRKHQKNHTGEKLFKCKECLKAFSQSSALIQHQRTHTGEKPYICKECGKAFSHSASLCKHLRTHTVEKSYRCKECGKSFSKRSGLFIHQKIHARDNPHKYNPGRKPSSCSTSLSGCQRIHSRKKSYLCNECGNAFKSSSSLRYHQRIHTGEKPFKCSECGRAFSQSASLIQHERIHTGEKPYRCNQCGKGFTSISRLNRHRIIHTGEKLYNCNECGKALSSHSTLIIHERIHTGEKPCKCKVCGKAFRQSSALIQHQRMHTGERPYKCNDCGKTFRCNSSLSNHQRIHTGEKPYRCLECGISFGQSAALIQHQRIHTGEKPFKCNTCGKTFRQSSSLIAHQRIHTGEKPYECNACGKLFSQRSSLTNHYKIHIEEDSLKTDLHV
SIO_010081: LOC105856696
subclass of: SO_0000673
so part of: LOC105856696
location: join(6007028..6007060,6009953..6010079,6011394..6011489,6012713..6014292)
location: region:6007028-6014292:1
so has part: feature:6007028-6007060:1:exon
so has part: feature:6009953-6010079:1:exon
so has part: feature:6011394-6011489:1:exon
so has part: feature:6012713-6014292:1:exon

XP_012594011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6007028-6007060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6009953-6010079:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6011394-6011489:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6012713-6014292:1:exon

LOC105856696
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105856696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 354B isoform X1
translation: MLPCPPSLLCLAFFSFPNKTRFCSLISVHCVVTDWIGKMPRVLMSLGTEQTCTPGKSGFWPCLFSSSVSPFLPLVSLVFEDVAVLFSRDEWRKLDPSQRKLYRDVMLENYSNLLSLGLPFTKPRVISLLQQGEDPWKVERESPGRPSPGFKSSPKTTKSTQTQDSFQELIRKRLKRDEPWDFILAKPCINEDRLKKQDKTKSLQIISITHTKILTVGGSHKNNEFSQNFNLKSVFIKQQRFAIEKTSSTYEIQRNNFKQNSNLHNQPKIKTAEKHYKCNICEKAFIHNSSLRKHQKNHTGEKLFKCKECLKAFSQSSALIQHQRTHTGEKPYICKECGKAFSHSASLCKHLRTHTVEKSYRCKECGKSFSKRSGLFIHQKIHARDNPHKYNPGRKPSSCSTSLSGCQRIHSRKKSYLCNECGNAFKSSSSLRYHQRIHTGEKPFKCSECGRAFSQSASLIQHERIHTGEKPYRCNQCGKGFTSISRLNRHRIIHTGEKLYNCNECGKALSSHSTLIIHERIHTGEKPCKCKVCGKAFRQSSALIQHQRMHTGERPYKCNDCGKTFRCNSSLSNHQRIHTGEKPYRCLECGISFGQSAALIQHQRIHTGEKPFKCNTCGKTFRQSSSLIAHQRIHTGEKPYECNACGKLFSQRSSLTNHYKIHIEEDSLKTDLHV
SIO_010081: LOC105856696
subclass of: SO_0000673
so part of: LOC105856696
location: join(6007234..6007455,6009953..6010079,6011394..6011489,6012713..6014292)
location: region:6007234-6014292:1
so has part: feature:6007234-6007455:1:exon
so has part: feature:6009953-6010079:1:exon
so has part: feature:6011394-6011489:1:exon
so has part: feature:6012713-6014292:1:exon

XP_012594009.1
type: Protein
SIO_000068: ncbiprotein

position:6007234:1
position: 6007234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6007234-6007455:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6009953-6010079:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6011394-6011489:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6012713-6014292:1:exon

LOC105856696
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105856696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 354B isoform X4
translation: MLENYSNLLSLGLPFTKPRVISLLQQGEDPWKVERESPGRPSPGFKSSPKTTKSTQTQDSFQELIRKRLKRDEPWDFILAKPCINEDRLKKQDKTKSLQIISITHTKILTVGGSHKNNEFSQNFNLKSVFIKQQRFAIEKTSSTYEIQRNNFKQNSNLHNQPKIKTAEKHYKCNICEKAFIHNSSLRKHQKNHTGEKLFKCKECLKAFSQSSALIQHQRTHTGEKPYICKECGKAFSHSASLCKHLRTHTVEKSYRCKECGKSFSKRSGLFIHQKIHARDNPHKYNPGRKPSSCSTSLSGCQRIHSRKKSYLCNECGNAFKSSSSLRYHQRIHTGEKPFKCSECGRAFSQSASLIQHERIHTGEKPYRCNQCGKGFTSISRLNRHRIIHTGEKLYNCNECGKALSSHSTLIIHERIHTGEKPCKCKVCGKAFRQSSALIQHQRMHTGERPYKCNDCGKTFRCNSSLSNHQRIHTGEKPYRCLECGISFGQSAALIQHQRIHTGEKPFKCNTCGKTFRQSSSLIAHQRIHTGEKPYECNACGKLFSQRSSLTNHYKIHIEEDSLKTDLHV
SIO_010081: LOC105856696
subclass of: SO_0000673
so part of: LOC105856696
location: join(6010046..6010079,6011394..6011489,6012713..6014292)
location: region:6010046-6014292:1
so has part: feature:6010046-6010079:1:exon
so has part: feature:6011394-6011489:1:exon
so has part: feature:6012713-6014292:1:exon

XP_020140174.1
type: Protein
SIO_000068: ncbiprotein

position:6010046:1
position: 6010046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6010046-6010079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6011394-6011489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6012713-6014292:1:exon

LOC105856696
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105856696
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 354B isoform X4
translation: MLENYSNLLSLGLPFTKPRVISLLQQGEDPWKVERESPGRPSPGFKSSPKTTKSTQTQDSFQELIRKRLKRDEPWDFILAKPCINEDRLKKQDKTKSLQIISITHTKILTVGGSHKNNEFSQNFNLKSVFIKQQRFAIEKTSSTYEIQRNNFKQNSNLHNQPKIKTAEKHYKCNICEKAFIHNSSLRKHQKNHTGEKLFKCKECLKAFSQSSALIQHQRTHTGEKPYICKECGKAFSHSASLCKHLRTHTVEKSYRCKECGKSFSKRSGLFIHQKIHARDNPHKYNPGRKPSSCSTSLSGCQRIHSRKKSYLCNECGNAFKSSSSLRYHQRIHTGEKPFKCSECGRAFSQSASLIQHERIHTGEKPYRCNQCGKGFTSISRLNRHRIIHTGEKLYNCNECGKALSSHSTLIIHERIHTGEKPCKCKVCGKAFRQSSALIQHQRMHTGERPYKCNDCGKTFRCNSSLSNHQRIHTGEKPYRCLECGISFGQSAALIQHQRIHTGEKPFKCNTCGKTFRQSSSLIAHQRIHTGEKPYECNACGKLFSQRSSLTNHYKIHIEEDSLKTDLHV
SIO_010081: LOC105856696
subclass of: SO_0000673
so part of: LOC105856696
location: join(6010046..6010079,6011394..6011489,6012713..6014292)
location: region:6010046-6014292:1
so has part: feature:6010046-6010079:1:exon
so has part: feature:6011394-6011489:1:exon
so has part: feature:6012713-6014292:1:exon

XP_020140175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6010046-6010079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6011394-6011489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6012713-6014292:1:exon

TRIM52
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TRIM52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6017972..6024134
location: region:6017972-6024134:1
so has part: feature:6017972-6024134:1:exon
subclass of: SO_0000010

105856695
type: Gene
SIO_000068: ncbigene

position:6017972:1
position: 6017972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6024134:1
position: 6024134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6017972-6024134:1:exon

TRIM52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TRIM52
product: tripartite motif containing 52
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_012738554.2
SIO_010081: TRIM52
subclass of: SO_0000673
so part of: TRIM52
location: join(6017972..6019445,6023186..6024134)
location: region:6017972-6024134:1
so has part: feature:6017972-6019445:1:exon
so has part: feature:6023186-6024134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6017972-6019445:1:exon

position:6019445:1
position: 6019445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6023186-6024134:1:exon

position:6023186:1
position: 6023186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TRIM52
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: tripartite motif-containing protein 52
translation: MAGYAATPNPLQTLQQEAVCAICLDYLEDPVSISCGHNFCRGCATRLWGKDEEDQAEEEDESEEGEEGGEAXGATGGWDSSIREVLYRGNADEEPFRDQEDDEFWVGYSGARNWGDVDDGWDQEEEEEEEEDRDYYLGGLRRDLRIDVYPEGEAALEAYSEGEEVYPDTRPPPRPPRQFTCPQCRKGFTRRSFRPNLQLANMVQVIRQMHPTPGRGSRANEQGVCPEHQEALKLFCEVDEEAICVVCRESGSHKQHSVVPLEEVVQEYKIRFLGKN
SIO_010081: TRIM52
subclass of: SO_0000673
so part of: TRIM52
location: join(6018640..6019445,6023186..6023209)
location: region:6018640-6023209:1
so has part: feature:6018640-6019445:1:exon
so has part: feature:6023186-6023209:1:exon

XP_012594008.1
type: Protein
SIO_000068: ncbiprotein

position:6018640:1
position: 6018640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6023209:1
position: 6023209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6018640-6019445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6023186-6023209:1:exon

LOC105856694
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105856694
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6033320..6041676
location: region:6033320-6041676:1
so has part: feature:6033320-6041676:1:exon
subclass of: SO_0000010

105856694
type: Gene
SIO_000068: ncbigene

position:6033320:1
position: 6033320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6041676:1
position: 6041676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6033320-6041676:1:exon

LOC105856694
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105856694
product: receptor of activated protein C kinase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2335 ESTs, 25 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_020284587.1
SIO_010081: LOC105856694
subclass of: SO_0000673
so part of: LOC105856694
location: join(6033320..6033423,6035262..6035374,6036879..6037049,6038376..6038523,6038759..6038854,6039573..6039683,6040181..6040321,6040818..6040928,6041561..6041676)
location: region:6033320-6041676:1
so has part: feature:6033320-6033423:1:exon
so has part: feature:6035262-6035374:1:exon
so has part: feature:6036879-6037049:1:exon
so has part: feature:6038376-6038523:1:exon
so has part: feature:6038759-6038854:1:exon
so has part: feature:6039573-6039683:1:exon
so has part: feature:6040181-6040321:1:exon
so has part: feature:6040818-6040928:1:exon
so has part: feature:6041561-6041676:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6033320-6033423:1:exon

position:6033423:1
position: 6033423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6035262-6035374:1:exon

position:6035262:1
position: 6035262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6035374:1
position: 6035374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6036879-6037049:1:exon

position:6036879:1
position: 6036879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6037049:1
position: 6037049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6038376-6038523:1:exon

position:6038376:1
position: 6038376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6038523:1
position: 6038523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6038759-6038854:1:exon

position:6038759:1
position: 6038759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6038854:1
position: 6038854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6039573-6039683:1:exon

position:6039573:1
position: 6039573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6039683:1
position: 6039683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6040181-6040321:1:exon

position:6040181:1
position: 6040181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6040321:1
position: 6040321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6040818-6040928:1:exon

position:6040818:1
position: 6040818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6040928:1
position: 6040928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6041561-6041676:1:exon

position:6041561:1
position: 6041561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105856694
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105856694
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: receptor of activated protein C kinase 1
translation: MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTXRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
SIO_010081: LOC105856694
subclass of: SO_0000673
so part of: LOC105856694
location: join(6035266..6035374,6036879..6037049,6038376..6038523,6038759..6038854,6039573..6039683,6040181..6040321,6040818..6040928,6041561..6041626)
location: region:6035266-6041626:1
so has part: feature:6035266-6035374:1:exon
so has part: feature:6036879-6037049:1:exon
so has part: feature:6038376-6038523:1:exon
so has part: feature:6038759-6038854:1:exon
so has part: feature:6039573-6039683:1:exon
so has part: feature:6040181-6040321:1:exon
so has part: feature:6040818-6040928:1:exon
so has part: feature:6041561-6041626:1:exon

XP_020140176.1
type: Protein
SIO_000068: ncbiprotein

position:6035266:1
position: 6035266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6041626:1
position: 6041626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6035266-6035374:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6036879-6037049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6038376-6038523:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6038759-6038854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6039573-6039683:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6040181-6040321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6040818-6040928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6041561-6041626:1:exon

TRIM41
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6042765..6053775)
location: region:6042765-6053775:-1
so has part: feature:6042765-6053775:-1:exon
subclass of: SO_0000010

105856692
type: Gene
SIO_000068: ncbigene

position:6042765:-1
position: 6042765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6053775:-1
position: 6053775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6042765-6053775:-1:exon

TRIM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TRIM41
product: tripartite motif containing 41, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 58 ESTs, 27 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012738547.2
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(6042765..6044375,6044799..6044926,6045128..6045150,6045646..6045876,6047534..6047629,6052223..6053766))
location: region:6042765-6053766:-1
so has part: feature:6052223-6053766:-1:exon
so has part: feature:6047534-6047629:-1:exon
so has part: feature:6045646-6045876:-1:exon
so has part: feature:6045128-6045150:-1:exon
so has part: feature:6044799-6044926:-1:exon
so has part: feature:6042765-6044375:-1:exon

position:6053766:-1
position: 6053766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6052223-6053766:-1:exon

position:6052223:-1
position: 6052223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6047534-6047629:-1:exon

position:6047534:-1
position: 6047534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6047629:-1
position: 6047629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6045646-6045876:-1:exon

position:6045646:-1
position: 6045646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6045876:-1
position: 6045876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6045128-6045150:-1:exon

position:6045128:-1
position: 6045128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6045150:-1
position: 6045150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6044799-6044926:-1:exon

position:6044799:-1
position: 6044799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6044926:-1
position: 6044926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6042765-6044375:-1:exon

position:6044375:-1
position: 6044375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TRIM41
product: tripartite motif containing 41, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 50 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012738550.2
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(6042767..6043207,6043558..6043614,6044200..6044375,6044799..6044926,6045128..6045150,6045646..6045876,6047534..6047629,6052223..6053775))
location: region:6042767-6053775:-1
so has part: feature:6052223-6053775:-1:exon
so has part: feature:6047534-6047629:-1:exon
so has part: feature:6045646-6045876:-1:exon
so has part: feature:6045128-6045150:-1:exon
so has part: feature:6044799-6044926:-1:exon
so has part: feature:6044200-6044375:-1:exon
so has part: feature:6043558-6043614:-1:exon
so has part: feature:6042767-6043207:-1:exon

position:6042767:-1
position: 6042767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6052223-6053775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6047534-6047629:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6045646-6045876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6045128-6045150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6044799-6044926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6044200-6044375:-1:exon

position:6044200:-1
position: 6044200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6043558-6043614:-1:exon

position:6043558:-1
position: 6043558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6043614:-1
position: 6043614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6042767-6043207:-1:exon

position:6043207:-1
position: 6043207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TRIM41
product: tripartite motif containing 41, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 41 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012738549.2
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(6043065..6043207,6043558..6043614,6044194..6044375,6044799..6044926,6045128..6045150,6045646..6045876,6047534..6047629,6052223..6053775))
location: region:6043065-6053775:-1
so has part: feature:6052223-6053775:-1:exon
so has part: feature:6047534-6047629:-1:exon
so has part: feature:6045646-6045876:-1:exon
so has part: feature:6045128-6045150:-1:exon
so has part: feature:6044799-6044926:-1:exon
so has part: feature:6044194-6044375:-1:exon
so has part: feature:6043558-6043614:-1:exon
so has part: feature:6043065-6043207:-1:exon

position:6043065:-1
position: 6043065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6052223-6053775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6047534-6047629:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6045646-6045876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6045128-6045150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6044799-6044926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6044194-6044375:-1:exon

position:6044194:-1
position: 6044194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6043558-6043614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6043065-6043207:-1:exon

TRIM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TRIM41
product: tripartite motif containing 41, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 41 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012738551.2
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(6043098..6043207,6043558..6043614,6044204..6044375,6044799..6044926,6045128..6045150,6045646..6045876,6047534..6047629,6052223..6053775))
location: region:6043098-6053775:-1
so has part: feature:6052223-6053775:-1:exon
so has part: feature:6047534-6047629:-1:exon
so has part: feature:6045646-6045876:-1:exon
so has part: feature:6045128-6045150:-1:exon
so has part: feature:6044799-6044926:-1:exon
so has part: feature:6044204-6044375:-1:exon
so has part: feature:6043558-6043614:-1:exon
so has part: feature:6043098-6043207:-1:exon

position:6043098:-1
position: 6043098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6052223-6053775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6047534-6047629:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6045646-6045876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6045128-6045150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6044799-6044926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6044204-6044375:-1:exon

position:6044204:-1
position: 6044204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6043558-6043614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6043098-6043207:-1:exon

TRIM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TRIM41
product: tripartite motif containing 41, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 44 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012738548.2
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(6043114..6043614,6044204..6044375,6044799..6044926,6045128..6045150,6045646..6045876,6047534..6047629,6052223..6053775))
location: region:6043114-6053775:-1
so has part: feature:6052223-6053775:-1:exon
so has part: feature:6047534-6047629:-1:exon
so has part: feature:6045646-6045876:-1:exon
so has part: feature:6045128-6045150:-1:exon
so has part: feature:6044799-6044926:-1:exon
so has part: feature:6044204-6044375:-1:exon
so has part: feature:6043114-6043614:-1:exon

position:6043114:-1
position: 6043114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6052223-6053775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6047534-6047629:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6045646-6045876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6045128-6045150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6044799-6044926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6044204-6044375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6043114-6043614:-1:exon

TRIM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM41 isoform X4
translation: MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDREELDREEEEEDGEEEEVEAVGAGGGWDTPMRDEDYEGDMEEEVEEEEEGVFWTRGMGGSNWDNMDYVWEEEDEEEDLDYYLGDMEEDLRGEDEEDEEEVLEEDEEEELDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPKHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQATQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQGFRSGRHYWEEPKEPSWPPARPSLTSVQQTGQNLASVRDLEWSP
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(6043160..6043207,6043558..6043614,6044200..6044375,6044799..6044926,6045128..6045150,6045646..6045876,6047534..6047629,6052223..6053032))
location: region:6043160-6053032:-1
so has part: feature:6052223-6053032:-1:exon
so has part: feature:6047534-6047629:-1:exon
so has part: feature:6045646-6045876:-1:exon
so has part: feature:6045128-6045150:-1:exon
so has part: feature:6044799-6044926:-1:exon
so has part: feature:6044200-6044375:-1:exon
so has part: feature:6043558-6043614:-1:exon
so has part: feature:6043160-6043207:-1:exon

XP_012594004.1
type: Protein
SIO_000068: ncbiprotein

position:6043160:-1
position: 6043160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6053032:-1
position: 6053032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6052223-6053032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6047534-6047629:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6045646-6045876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6045128-6045150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6044799-6044926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6044200-6044375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6043558-6043614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6043160-6043207:-1:exon

TRIM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM41 isoform X3
translation: MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDREELDREEEEEDGEEEEVEAVGAGGGWDTPMRDEDYEGDMEEEVEEEEEGVFWTRGMGGSNWDNMDYVWEEEDEEEDLDYYLGDMEEDLRGEDEEDEEEVLEEDEEEELDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPKHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQATQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQGFRSGRHYWEVEEPKEPSWPPARPSLTSVQQTGQNLASVRDLEWSP
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(6043160..6043207,6043558..6043614,6044194..6044375,6044799..6044926,6045128..6045150,6045646..6045876,6047534..6047629,6052223..6053032))
location: region:6043160-6053032:-1
so has part: feature:6052223-6053032:-1:exon
so has part: feature:6047534-6047629:-1:exon
so has part: feature:6045646-6045876:-1:exon
so has part: feature:6045128-6045150:-1:exon
so has part: feature:6044799-6044926:-1:exon
so has part: feature:6044194-6044375:-1:exon
so has part: feature:6043558-6043614:-1:exon
so has part: feature:6043160-6043207:-1:exon

XP_012594003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6052223-6053032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6047534-6047629:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6045646-6045876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6045128-6045150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6044799-6044926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6044194-6044375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6043558-6043614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6043160-6043207:-1:exon

TRIM41
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: TRIM41
product: tripartite motif containing 41, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 37 ESTs, 27 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_001147271.1
SIO_010081: TRIM41
so part of: TRIM41
location: complement(join(6043165..6043207,6043558..6044375,6044799..6044926,6045128..6045150,6045646..6045876,6047534..6047629,6052223..6053032))
location: region:6043165-6053032:-1
so has part: feature:6052223-6053032:-1:exon
so has part: feature:6047534-6047629:-1:exon
so has part: feature:6045646-6045876:-1:exon
so has part: feature:6045128-6045150:-1:exon
so has part: feature:6044799-6044926:-1:exon
so has part: feature:6043558-6044375:-1:exon
so has part: feature:6043165-6043207:-1:exon

position:6043165:-1
position: 6043165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6052223-6053032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6047534-6047629:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6045646-6045876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6045128-6045150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6044799-6044926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6043558-6044375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6043165-6043207:-1:exon

TRIM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM41 isoform X5
translation: MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDREELDREEEEEDGEEEEVEAVGAGGGWDTPMRDEDYEGDMEEEVEEEEEGVFWTRGMGGSNWDNMDYVWEEEDEEEDLDYYLGDMEEDLRGEDEEDEEEVLEEDEEEELDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPKHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQATQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQGFRSGRHYWSLKNPPGLQLGLLSPLSNRPARI
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(6043192..6043207,6043558..6043614,6044204..6044375,6044799..6044926,6045128..6045150,6045646..6045876,6047534..6047629,6052223..6053032))
location: region:6043192-6053032:-1
so has part: feature:6052223-6053032:-1:exon
so has part: feature:6047534-6047629:-1:exon
so has part: feature:6045646-6045876:-1:exon
so has part: feature:6045128-6045150:-1:exon
so has part: feature:6044799-6044926:-1:exon
so has part: feature:6044204-6044375:-1:exon
so has part: feature:6043558-6043614:-1:exon
so has part: feature:6043192-6043207:-1:exon

XP_012594005.1
type: Protein
SIO_000068: ncbiprotein

position:6043192:-1
position: 6043192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6052223-6053032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6047534-6047629:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6045646-6045876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6045128-6045150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6044799-6044926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6044204-6044375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6043558-6043614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6043192-6043207:-1:exon

TRIM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM41 isoform X2
translation: MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDREELDREEEEEDGEEEEVEAVGAGGGWDTPMRDEDYEGDMEEEVEEEEEGVFWTRGMGGSNWDNMDYVWEEEDEEEDLDYYLGDMEEDLRGEDEEDEEEVLEEDEEEELDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPKHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQATQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQGFRSGRHYWSLKNPPGLQLGLLSPLSNRSAWVPDSENSCLAFPVCPSHPKEGMQGDCNFIP
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(6043455..6043614,6044204..6044375,6044799..6044926,6045128..6045150,6045646..6045876,6047534..6047629,6052223..6053032))
location: region:6043455-6053032:-1
so has part: feature:6052223-6053032:-1:exon
so has part: feature:6047534-6047629:-1:exon
so has part: feature:6045646-6045876:-1:exon
so has part: feature:6045128-6045150:-1:exon
so has part: feature:6044799-6044926:-1:exon
so has part: feature:6044204-6044375:-1:exon
so has part: feature:6043455-6043614:-1:exon

XP_012594002.1
type: Protein
SIO_000068: ncbiprotein

position:6043455:-1
position: 6043455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6052223-6053032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6047534-6047629:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6045646-6045876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6045128-6045150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6044799-6044926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6044204-6044375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6043455-6043614:-1:exon

TRIM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM41 isoform X1
translation: MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDREELDREEEEEDGEEEEVEAVGAGGGWDTPMRDEDYEGDMEEEVEEEEEGVFWTRGMGGSNWDNMDYVWEEEDEEEDLDYYLGDMEEDLRGEDEEDEEEVLEEDEEEELDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPKHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQATQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVGSGDASSSRHHHRRRRLHLPQQPLLQREVWCVGTNGKRYQAQSSTEQTLLSPSEKPRRFGVYLDYEAGRLGFYNAETLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: complement(join(6043774..6044375,6044799..6044926,6045128..6045150,6045646..6045876,6047534..6047629,6052223..6053032))
location: region:6043774-6053032:-1
so has part: feature:6052223-6053032:-1:exon
so has part: feature:6047534-6047629:-1:exon
so has part: feature:6045646-6045876:-1:exon
so has part: feature:6045128-6045150:-1:exon
so has part: feature:6044799-6044926:-1:exon
so has part: feature:6043774-6044375:-1:exon

XP_012594001.1
type: Protein
SIO_000068: ncbiprotein

position:6043774:-1
position: 6043774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6052223-6053032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6047534-6047629:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6045646-6045876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6045128-6045150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6044799-6044926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6043774-6044375:-1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 6056958..6057030
location: region:6056958-6057030:1
so has part: feature:6056958-6057030:1:exon
subclass of: SO_0000663

109730150
type: Gene
SIO_000068: ncbigene

position:6056958:1
position: 6056958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6057030:1
position: 6057030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6056958-6057030:1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30608
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:6056991..6056993,aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: 6056958..6057030
location: region:6056958-6057030:1
so has part: feature:6056958-6057030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6056958-6057030:1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 6057441..6057513
location: region:6057441-6057513:1
so has part: feature:6057441-6057513:1:exon
subclass of: SO_0000663

109730155
type: Gene
SIO_000068: ncbigene

position:6057441:1
position: 6057441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6057513:1
position: 6057513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6057441-6057513:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30608
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:6057474..6057476,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 6057441..6057513
location: region:6057441-6057513:1
so has part: feature:6057441-6057513:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6057441-6057513:1:exon

TRNAA-UGC
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TRNAA-UGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(6068766..6068837)
location: region:6068766-6068837:-1
so has part: feature:6068766-6068837:-1:exon
subclass of: SO_0000663

109730154
type: Gene
SIO_000068: ncbigene

position:6068766:-1
position: 6068766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6068837:-1
position: 6068837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6068766-6068837:-1:exon

TRNAA-UGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30608
gene: TRNAA-UGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(6068803..6068805),aa:Ala, seq:tgc)
SIO_010081: TRNAA-UGC
subclass of: SO_0000673
so part of: TRNAA-UGC
location: complement(6068766..6068837)
location: region:6068766-6068837:-1
so has part: feature:6068766-6068837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6068766-6068837:-1:exon

TRIM7
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TRIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6072867..6095420
location: region:6072867-6095420:1
so has part: feature:6072867-6095420:1:exon
subclass of: SO_0000010

105856691
type: Gene
SIO_000068: ncbigene

position:6072867:1
position: 6072867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6095420:1
position: 6095420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6072867-6095420:1:exon

TRIM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TRIM7
product: tripartite motif containing 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_020284589.1
SIO_010081: TRIM7
subclass of: SO_0000673
so part of: TRIM7
location: join(6072867..6072898,6073706..6073821,6088533..6088763,6089414..6089436,6089704..6089819,6090264..6090299,6093830..6094785)
location: region:6072867-6094785:1
so has part: feature:6072867-6072898:1:exon
so has part: feature:6073706-6073821:1:exon
so has part: feature:6088533-6088763:1:exon
so has part: feature:6089414-6089436:1:exon
so has part: feature:6089704-6089819:1:exon
so has part: feature:6090264-6090299:1:exon
so has part: feature:6093830-6094785:1:exon

position:6094785:1
position: 6094785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6072867-6072898:1:exon

position:6072898:1
position: 6072898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6073706-6073821:1:exon

position:6073706:1
position: 6073706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6073821:1
position: 6073821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6088533-6088763:1:exon

position:6088533:1
position: 6088533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6088763:1
position: 6088763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6089414-6089436:1:exon

position:6089414:1
position: 6089414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6089436:1
position: 6089436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6089704-6089819:1:exon

position:6089704:1
position: 6089704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6089819:1
position: 6089819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6090264-6090299:1:exon

position:6090264:1
position: 6090264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6090299:1
position: 6090299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6093830-6094785:1:exon

position:6093830:1
position: 6093830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TRIM7
product: tripartite motif containing 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012738546.2
SIO_010081: TRIM7
subclass of: SO_0000673
so part of: TRIM7
location: join(6072867..6072898,6073706..6073801,6088533..6088763,6089414..6089436,6089704..6089819,6090264..6090299,6093830..6094785)
location: region:6072867-6094785:1
so has part: feature:6072867-6072898:1:exon
so has part: feature:6073706-6073801:1:exon
so has part: feature:6088533-6088763:1:exon
so has part: feature:6089414-6089436:1:exon
so has part: feature:6089704-6089819:1:exon
so has part: feature:6090264-6090299:1:exon
so has part: feature:6093830-6094785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6072867-6072898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6073706-6073801:1:exon

position:6073801:1
position: 6073801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6088533-6088763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6089414-6089436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6089704-6089819:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6090264-6090299:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6093830-6094785:1:exon

TRIM7
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: TRIM7
product: tripartite motif containing 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222865.1
SIO_010081: TRIM7
so part of: TRIM7
location: join(6073085..6073585,6073706..6073821,6088533..6088763,6089414..6089436,6089704..6089819,6090264..6090299,6093830..6094657,6095326..6095420)
location: region:6073085-6095420:1
so has part: feature:6073085-6073585:1:exon
so has part: feature:6073706-6073821:1:exon
so has part: feature:6088533-6088763:1:exon
so has part: feature:6089414-6089436:1:exon
so has part: feature:6089704-6089819:1:exon
so has part: feature:6090264-6090299:1:exon
so has part: feature:6093830-6094657:1:exon
so has part: feature:6095326-6095420:1:exon

position:6073085:1
position: 6073085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6073085-6073585:1:exon

position:6073585:1
position: 6073585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6073706-6073821:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6088533-6088763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6089414-6089436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6089704-6089819:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6090264-6090299:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6093830-6094657:1:exon

position:6094657:1
position: 6094657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6095326-6095420:1:exon

position:6095326:1
position: 6095326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TRIM7
product: tripartite motif containing 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284588.1
SIO_010081: TRIM7
subclass of: SO_0000673
so part of: TRIM7
location: join(6073085..6073585,6073706..6073821,6088533..6088763,6089414..6089436,6089704..6089819,6090264..6090299,6093830..6094785)
location: region:6073085-6094785:1
so has part: feature:6073085-6073585:1:exon
so has part: feature:6073706-6073821:1:exon
so has part: feature:6088533-6088763:1:exon
so has part: feature:6089414-6089436:1:exon
so has part: feature:6089704-6089819:1:exon
so has part: feature:6090264-6090299:1:exon
so has part: feature:6093830-6094785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6073085-6073585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6073706-6073821:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6088533-6088763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6089414-6089436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6089704-6089819:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6090264-6090299:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6093830-6094785:1:exon

TRIM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TRIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 7
translation: MAAEQEKVGAEFQALRAFLVEQEGRLQGHLEELSREVTQKHKENLTQLAGEISQLSKLCGQIQETAGKPDLDFLQEFKSTLDRCSNVPGPKPTTVSSEMKNKVWNVSLKTFVLKGLLKKFKEDLRGELEKEEKVELTLDPDTANPRLVLSLDLKSVRLGQRAQDLPGHPRRFDTNTRVLASCGFSSGRHHWEVEVGSRDGWAFGVARESVRRKGLTPFTPEEGVWALQLHGGQYWAVTSPERTPLSCARLSRVRVALDLEVGAVSFYAVEDMRHLYTFRVNFQERVFPLFSVCSTGTYLRIWP
SIO_010081: TRIM7
subclass of: SO_0000673
so part of: TRIM7
location: join(6088539..6088763,6089414..6089436,6089704..6089819,6090264..6090299,6093830..6094341)
location: region:6088539-6094341:1
so has part: feature:6088539-6088763:1:exon
so has part: feature:6089414-6089436:1:exon
so has part: feature:6089704-6089819:1:exon
so has part: feature:6090264-6090299:1:exon
so has part: feature:6093830-6094341:1:exon

XP_020140177.1
type: Protein
SIO_000068: ncbiprotein

position:6088539:1
position: 6088539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6094341:1
position: 6094341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6088539-6088763:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6089414-6089436:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6089704-6089819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6090264-6090299:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6093830-6094341:1:exon

TRIM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TRIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 7
translation: MAAEQEKVGAEFQALRAFLVEQEGRLQGHLEELSREVTQKHKENLTQLAGEISQLSKLCGQIQETAGKPDLDFLQEFKSTLDRCSNVPGPKPTTVSSEMKNKVWNVSLKTFVLKGLLKKFKEDLRGELEKEEKVELTLDPDTANPRLVLSLDLKSVRLGQRAQDLPGHPRRFDTNTRVLASCGFSSGRHHWEVEVGSRDGWAFGVARESVRRKGLTPFTPEEGVWALQLHGGQYWAVTSPERTPLSCARLSRVRVALDLEVGAVSFYAVEDMRHLYTFRVNFQERVFPLFSVCSTGTYLRIWP
SIO_010081: TRIM7
subclass of: SO_0000673
so part of: TRIM7
location: join(6088539..6088763,6089414..6089436,6089704..6089819,6090264..6090299,6093830..6094341)
location: region:6088539-6094341:1
so has part: feature:6088539-6088763:1:exon
so has part: feature:6089414-6089436:1:exon
so has part: feature:6089704-6089819:1:exon
so has part: feature:6090264-6090299:1:exon
so has part: feature:6093830-6094341:1:exon

XP_020140178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6088539-6088763:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6089414-6089436:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6089704-6089819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6090264-6090299:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6093830-6094341:1:exon

TRIM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TRIM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 7
translation: MAAEQEKVGAEFQALRAFLVEQEGRLQGHLEELSREVTQKHKENLTQLAGEISQLSKLCGQIQETAGKPDLDFLQEFKSTLDRCSNVPGPKPTTVSSEMKNKVWNVSLKTFVLKGLLKKFKEDLRGELEKEEKVELTLDPDTANPRLVLSLDLKSVRLGQRAQDLPGHPRRFDTNTRVLASCGFSSGRHHWEVEVGSRDGWAFGVARESVRRKGLTPFTPEEGVWALQLHGGQYWAVTSPERTPLSCARLSRVRVALDLEVGAVSFYAVEDMRHLYTFRVNFQERVFPLFSVCSTGTYLRIWP
SIO_010081: TRIM7
subclass of: SO_0000673
so part of: TRIM7
location: join(6088539..6088763,6089414..6089436,6089704..6089819,6090264..6090299,6093830..6094341)
location: region:6088539-6094341:1
so has part: feature:6088539-6088763:1:exon
so has part: feature:6089414-6089436:1:exon
so has part: feature:6089704-6089819:1:exon
so has part: feature:6090264-6090299:1:exon
so has part: feature:6093830-6094341:1:exon

XP_012594000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6088539-6088763:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6089414-6089436:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6089704-6089819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6090264-6090299:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6093830-6094341:1:exon

TRNAT-UGU
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TRNAT-UGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 6097436..6097508
location: region:6097436-6097508:1
so has part: feature:6097436-6097508:1:exon
subclass of: SO_0000663

109730156
type: Gene
SIO_000068: ncbigene

position:6097436:1
position: 6097436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6097508:1
position: 6097508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6097436-6097508:1:exon

TRNAT-UGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30608
gene: TRNAT-UGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:6097469..6097471,aa:Thr,seq:tgt)
SIO_010081: TRNAT-UGU
subclass of: SO_0000673
so part of: TRNAT-UGU
location: 6097436..6097508
location: region:6097436-6097508:1
so has part: feature:6097436-6097508:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6097436-6097508:1:exon

TRNAP-UGG
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TRNAP-UGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 6104297..6104368
location: region:6104297-6104368:1
so has part: feature:6104297-6104368:1:exon
subclass of: SO_0000663

109730157
type: Gene
SIO_000068: ncbigene

position:6104297:1
position: 6104297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6104368:1
position: 6104368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6104297-6104368:1:exon

TRNAP-UGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30608
gene: TRNAP-UGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:6104329..6104331,aa:Pro,seq:tgg)
SIO_010081: TRNAP-UGG
subclass of: SO_0000673
so part of: TRNAP-UGG
location: 6104297..6104368
location: region:6104297-6104368:1
so has part: feature:6104297-6104368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6104297-6104368:1:exon

TRNAV-AAC
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TRNAV-AAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 6104676..6104748
location: region:6104676-6104748:1
so has part: feature:6104676-6104748:1:exon
subclass of: SO_0000663

109730158
type: Gene
SIO_000068: ncbigene

position:6104676:1
position: 6104676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6104748:1
position: 6104748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6104676-6104748:1:exon

TRNAV-AAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30608
gene: TRNAV-AAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:6104709..6104711,aa:Val,seq:aac)
SIO_010081: TRNAV-AAC
subclass of: SO_0000673
so part of: TRNAV-AAC
location: 6104676..6104748
location: region:6104676-6104748:1
so has part: feature:6104676-6104748:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6104676-6104748:1:exon

TRNAP-UGG
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TRNAP-UGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 6114636..6114707
location: region:6114636-6114707:1
so has part: feature:6114636-6114707:1:exon
subclass of: SO_0000663

109730151
type: Gene
SIO_000068: ncbigene

position:6114636:1
position: 6114636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6114707:1
position: 6114707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6114636-6114707:1:exon

TRNAP-UGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30608
gene: TRNAP-UGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:6114668..6114670,aa:Pro,seq:tgg)
SIO_010081: TRNAP-UGG
subclass of: SO_0000673
so part of: TRNAP-UGG
location: 6114636..6114707
location: region:6114636-6114707:1
so has part: feature:6114636-6114707:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6114636-6114707:1:exon

TRNAV-AAC
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TRNAV-AAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 6115015..6115087
location: region:6115015-6115087:1
so has part: feature:6115015-6115087:1:exon
subclass of: SO_0000663

109730152
type: Gene
SIO_000068: ncbigene

position:6115015:1
position: 6115015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6115087:1
position: 6115087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6115015-6115087:1:exon

TRNAV-AAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30608
gene: TRNAV-AAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:6115048..6115050,aa:Val,seq:aac)
SIO_010081: TRNAV-AAC
subclass of: SO_0000673
so part of: TRNAV-AAC
location: 6115015..6115087
location: region:6115015-6115087:1
so has part: feature:6115015-6115087:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6115015-6115087:1:exon

TRNAV-AAC
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TRNAV-AAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 6125697..6125769
location: region:6125697-6125769:1
so has part: feature:6125697-6125769:1:exon
subclass of: SO_0000663

109730153
type: Gene
SIO_000068: ncbigene

position:6125697:1
position: 6125697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6125769:1
position: 6125769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6125697-6125769:1:exon

TRNAV-AAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30608
gene: TRNAV-AAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:6125730..6125732,aa:Val,seq:aac)
SIO_010081: TRNAV-AAC
subclass of: SO_0000673
so part of: TRNAV-AAC
location: 6125697..6125769
location: region:6125697-6125769:1
so has part: feature:6125697-6125769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6125697-6125769:1:exon

LOC105856700
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105856700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6150464..6151533)
location: region:6150464-6151533:-1
so has part: feature:6150464-6151533:-1:exon

105856700
type: Gene
SIO_000068: ncbigene

position:6150464:-1
position: 6150464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6151533:-1
position: 6151533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6150464-6151533:-1:exon

LOC105856700
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105856700
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105856700
subclass of: SO_0000673
so part of: LOC105856700
location: complement(6150464..6151533)
location: region:6150464-6151533:-1
so has part: feature:6150464-6151533:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6150464-6151533:-1:exon

LOC105856702
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105856702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6158409..6159260
location: region:6158409-6159260:1
so has part: feature:6158409-6159260:1:exon
subclass of: SO_0000010

105856702
type: Gene
SIO_000068: ncbigene

position:6158409:1
position: 6158409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6159260:1
position: 6159260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6158409-6159260:1:exon

LOC105856702
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105856702
product: olfactory receptor 56
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
transcript id: XM_012738561.1
SIO_010081: LOC105856702
subclass of: SO_0000673
so part of: LOC105856702
location: 6158409..6159260
location: region:6158409-6159260:1
so has part: feature:6158409-6159260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6158409-6159260:1:exon

LOC105856702
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105856702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 56
translation: MAVFTTALCGNVLLVFLICVDPRLHTPMYFFLSQLSLMDLMLVCSVVPKMAANFLSGRKSISFAGCGTQVGFFVSLVGSEGLLLGLMAYDRYVAISRPLHYPVLMNQRVCAQIAGSSWAFGILDGMIQMAAAMTFPYCGSRDVDHFFCEVPALLKLACADTSLFDTLLFACCVFMLLLPFSIIVASYARILGTVLRMHSVQARKKALATCSSHLTAVSLFYGAAMFIYLRPRSYRVPGHDKVVSVFYTVLTPMLNPLIYSLRNREVTGALRKGLGRCRVGGRH
SIO_010081: LOC105856702
subclass of: SO_0000673
so part of: LOC105856702
location: 6158409..6159260
location: region:6158409-6159260:1
so has part: feature:6158409-6159260:1:exon

XP_012594015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6158409-6159260:1:exon

LOC109730131
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6183934..6190044
location: region:6183934-6190044:1
so has part: feature:6183934-6190044:1:exon
subclass of: SO_0000010

109730131
type: Gene
SIO_000068: ncbigene

position:6183934:1
position: 6183934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6190044:1
position: 6190044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6183934-6190044:1:exon

LOC109730131
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC109730131
product: olfactory receptor 2T33-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284536.1
SIO_010081: LOC109730131
subclass of: SO_0000673
so part of: LOC109730131
location: join(6183934..6184047,6184105..6184691,6189792..6190044)
location: region:6183934-6190044:1
so has part: feature:6183934-6184047:1:exon
so has part: feature:6184105-6184691:1:exon
so has part: feature:6189792-6190044:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6183934-6184047:1:exon

position:6184047:1
position: 6184047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6184105-6184691:1:exon

position:6184105:1
position: 6184105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6184691:1
position: 6184691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6189792-6190044:1:exon

position:6189792:1
position: 6189792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109730131
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC109730131
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: olfactory receptor 2T33-like
translation: MAWAAGNWTPVPHFVLLGLSPGSPSPAGAAAVLLALLACAPTHFRLGADCGCAPMHFLLGWLALADMALACTVAPRMAADLLRGGGAVSLAGCGLQILSFLTLLGDECFLLAAMAYDRYVAVCRPLRYAAVMSRRACWRLVAAAWLFGLADGLAQAVSALRFPFCGAGRPVDHFFCEVPAVLRLACADTALYETLIYVCCVLMLLLPFAAVAASYLRILAAVLRMRSARGRRKAFATCSSHLAVVSLFYGAAMVTYMRPQAYHSARQDKVVSAFYTLVTPVLNPLIYSLRNKEVAGALRKLLGRCPRGGALG
SIO_010081: LOC109730131
subclass of: SO_0000673
so part of: LOC109730131
location: join(6183934..6184047,6184105..6184691,6189792..6190031)
location: region:6183934-6190031:1
so has part: feature:6183934-6184047:1:exon
so has part: feature:6184105-6184691:1:exon
so has part: feature:6189792-6190031:1:exon

XP_020140125.1
type: Protein
SIO_000068: ncbiprotein

position:6190031:1
position: 6190031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6183934-6184047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6184105-6184691:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6189792-6190031:1:exon

LOC105856699
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105856699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6203688..6206045
location: region:6203688-6206045:1
so has part: feature:6203688-6206045:1:exon

105856699
type: Gene
SIO_000068: ncbigene

position:6203688:1
position: 6203688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6206045:1
position: 6206045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6203688-6206045:1:exon

LOC105856699
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105856699
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105856699
subclass of: SO_0000673
so part of: LOC105856699
location: 6203688..6204072
location: region:6203688-6204072:1
so has part: feature:6203688-6204072:1:exon

position:6204072:1
position: 6204072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6203688-6204072:1:exon

LOC105856699
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105856699
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105856699
subclass of: SO_0000673
so part of: LOC105856699
location: 6204711..6205523
location: region:6204711-6205523:1
so has part: feature:6204711-6205523:1:exon

position:6204711:1
position: 6204711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6205523:1
position: 6205523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6204711-6205523:1:exon

LOC105856699
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105856699
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105856699
subclass of: SO_0000673
so part of: LOC105856699
location: 6205968..6206045
location: region:6205968-6206045:1
so has part: feature:6205968-6206045:1:exon

position:6205968:1
position: 6205968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6205968-6206045:1:exon

BTNL9
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: BTNL9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<6210242..6233661)
location: region:6210242-6233661:-1
so has part: feature:6210242-6233661:-1:exon
subclass of: SO_0000010

105856698
type: Gene
SIO_000068: ncbigene

position:6210242:-1
position: 6210242
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:6233661:-1
position: 6233661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6210242-6233661:-1:exon

BTNL9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: BTNL9
product: butyrophilin like 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284537.1
SIO_010081: BTNL9
subclass of: SO_0000673
so part of: BTNL9
location: complement(join(<6210242..6210297,6212219..6212245,6213833..6213859,6214099..6214119,6222838..6222858,6223096..6223128,6227919..6228200,6230188..6231592,6233468..6233661))
location: region:6210242-6233661:-1
so has part: feature:6233468-6233661:-1:exon
so has part: feature:6230188-6231592:-1:exon
so has part: feature:6227919-6228200:-1:exon
so has part: feature:6223096-6223128:-1:exon
so has part: feature:6222838-6222858:-1:exon
so has part: feature:6214099-6214119:-1:exon
so has part: feature:6213833-6213859:-1:exon
so has part: feature:6212219-6212245:-1:exon
so has part: feature:6210242-6210297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6233468-6233661:-1:exon

position:6233468:-1
position: 6233468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6230188-6231592:-1:exon

position:6230188:-1
position: 6230188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6231592:-1
position: 6231592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6227919-6228200:-1:exon

position:6227919:-1
position: 6227919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6228200:-1
position: 6228200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6223096-6223128:-1:exon

position:6223096:-1
position: 6223096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6223128:-1
position: 6223128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6222838-6222858:-1:exon

position:6222838:-1
position: 6222838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6222858:-1
position: 6222858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6214099-6214119:-1:exon

position:6214099:-1
position: 6214099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6214119:-1
position: 6214119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6213833-6213859:-1:exon

position:6213833:-1
position: 6213833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6213859:-1
position: 6213859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6212219-6212245:-1:exon

position:6212219:-1
position: 6212219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6212245:-1
position: 6212245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6210242-6210297:-1:exon

position:6210297:-1
position: 6210297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BTNL9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: BTNL9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin-like protein 9
translation: MEIRWFRSRTADVVHLYRERQEFPGRQLAQFRNRTRLIKEGILDGSVVLQLRSVAPSDQGLFGCRFLSGNFSGEAVWELEVAGLGSDPHIFLEGFKKGGIQLRCSSSGWYPKPKAQWRDHQGQCLPPESEAIIQDAQGLFSLETSVVVRGGAHGNLSLSILNLLLGQKKELVVQIAEKLTQEAAKRQGTLTAELEKLQMELDWRRAEGQAEWRAAQKYAAEVTLDPASAHPSLEVSED
SIO_010081: BTNL9
subclass of: SO_0000673
so part of: BTNL9
location: complement(join(<6210242..6210297,6212219..6212245,6213833..6213859,6214099..6214119,6222838..6222858,6223096..6223128,6227919..6228200,6230188..6230434))
location: region:6210242-6230434:-1
so has part: feature:6230188-6230434:-1:exon
so has part: feature:6227919-6228200:-1:exon
so has part: feature:6223096-6223128:-1:exon
so has part: feature:6222838-6222858:-1:exon
so has part: feature:6214099-6214119:-1:exon
so has part: feature:6213833-6213859:-1:exon
so has part: feature:6212219-6212245:-1:exon
so has part: feature:6210242-6210297:-1:exon

XP_020140126.1
type: Protein
SIO_000068: ncbiprotein

position:6230434:-1
position: 6230434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6230188-6230434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6227919-6228200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6223096-6223128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6222838-6222858:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6214099-6214119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6213833-6213859:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6212219-6212245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6210242-6210297:-1:exon

ZFP62
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: ZFP62
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6237495..6250616
location: region:6237495-6250616:1
so has part: feature:6237495-6250616:1:exon
subclass of: SO_0000010

105856690
type: Gene
SIO_000068: ncbigene

position:6237495:1
position: 6237495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6250616:1
position: 6250616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6237495-6250616:1:exon

ZFP62
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZFP62
product: ZFP62 zinc finger protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 43 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012738545.2
SIO_010081: ZFP62
subclass of: SO_0000673
so part of: ZFP62
location: join(6237495..6238224,6246703..6250611)
location: region:6237495-6250611:1
so has part: feature:6237495-6238224:1:exon
so has part: feature:6246703-6250611:1:exon

position:6250611:1
position: 6250611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6237495-6238224:1:exon

position:6238224:1
position: 6238224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6246703-6250611:1:exon

position:6246703:1
position: 6246703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZFP62
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ZFP62
product: ZFP62 zinc finger protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 43 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_020284582.1
SIO_010081: ZFP62
subclass of: SO_0000673
so part of: ZFP62
location: join(6243154..6243328,6246703..6250616)
location: region:6243154-6250616:1
so has part: feature:6243154-6243328:1:exon
so has part: feature:6246703-6250616:1:exon

position:6243154:1
position: 6243154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6243154-6243328:1:exon

position:6243328:1
position: 6243328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6246703-6250616:1:exon

ZFP62
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZFP62
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 62 homolog isoform X1
translation: MDLILFFEYAEHYYASISKYCTESYRVSVCPHLPSLLLLSTPLSHLKMGTEDEEPTEKSENVGNAECKWPKTESLHKDPVQESKVGETCDWDSKIESQWEKPAGKRMKEDNSGIREIVGKAKNMANLKTEQGDKTSENSSQLSPKHIPYQTVPAEQKSSEQGKCVENINGSSHPSLQQKTSAVKKSHKCDECGKSFKYNSRLVQHKIMHTGEKRYECSDCGGTFRSSSSLRVHKRIHTGEKPYKCEECGKAYMSYSSLINHKSTHSGEKNCKCDECGKSFNYSSVLDQHKRIHTGEKPYECGECGKAFRNSSGLRVHRRIHTGEKPYECDICGKTFSNSSGLRVHKRIHTGEKPYECDECGKAFITCRTLLNHKSIHFGDKPYKCDECEKSFNYSSLLIQHKVIHTGEKPYECDECGKAFRNSSGLIVHKRIHTGEKPYKCDVCGKAFSYSSGLAVHKSIHPGKKAHECKECGKSFSYNSLLLQHKMIHTGERPYVCDVCGKTFRNNAGLKVHRRLHTGEKPYKCDVCGKAYISRSSLKNHKGIHLGEKPYKCSYCEKSFNYSSALEQHKRIHTREKPFGCDECGKAFRNNSGLKVHKRIHTGERPYKCEECGKAYISLSSLINHKSVHPGEKPFKCDECEKAFITYRALINHKRVHLGEKPYKCDVCEKSFNYTSLLSQHKRVHTREKPYECDRCEKVFRNNSSLKVHKRIHTGEKPYECDVCGKAYISHSSLINHKSTHPGKTPYTCNECGKAFFSSRTLISHKRVHLGEKPFKCVECGKSFSYSSLLSQHKRIHTGEKPYVCDRCGKAFRNSSGLTVHKRIHTGEKPYQCDLCGKAYISHSSLINHKSVHRGKQPYNCECGKSFNYRSVLDQHKRIHTGKKPYRCNECGKAFNIRSNLTKHKRTHTGEEFLNVTNVGSHSGTSQRRTYEEGGNALDGTRMRMPL
SIO_010081: ZFP62
subclass of: SO_0000673
so part of: ZFP62
location: join(6243202..6243328,6246703..6249419)
location: region:6243202-6249419:1
so has part: feature:6243202-6243328:1:exon
so has part: feature:6246703-6249419:1:exon

XP_020140171.1
type: Protein
SIO_000068: ncbiprotein

position:6243202:1
position: 6243202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6249419:1
position: 6249419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6243202-6243328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6246703-6249419:1:exon

ZFP62
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ZFP62
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 62 homolog isoform X2
translation: MGTEDEEPTEKSENVGNAECKWPKTESLHKDPVQESKVGETCDWDSKIESQWEKPAGKRMKEDNSGIREIVGKAKNMANLKTEQGDKTSENSSQLSPKHIPYQTVPAEQKSSEQGKCVENINGSSHPSLQQKTSAVKKSHKCDECGKSFKYNSRLVQHKIMHTGEKRYECSDCGGTFRSSSSLRVHKRIHTGEKPYKCEECGKAYMSYSSLINHKSTHSGEKNCKCDECGKSFNYSSVLDQHKRIHTGEKPYECGECGKAFRNSSGLRVHRRIHTGEKPYECDICGKTFSNSSGLRVHKRIHTGEKPYECDECGKAFITCRTLLNHKSIHFGDKPYKCDECEKSFNYSSLLIQHKVIHTGEKPYECDECGKAFRNSSGLIVHKRIHTGEKPYKCDVCGKAFSYSSGLAVHKSIHPGKKAHECKECGKSFSYNSLLLQHKMIHTGERPYVCDVCGKTFRNNAGLKVHRRLHTGEKPYKCDVCGKAYISRSSLKNHKGIHLGEKPYKCSYCEKSFNYSSALEQHKRIHTREKPFGCDECGKAFRNNSGLKVHKRIHTGERPYKCEECGKAYISLSSLINHKSVHPGEKPFKCDECEKAFITYRALINHKRVHLGEKPYKCDVCEKSFNYTSLLSQHKRVHTREKPYECDRCEKVFRNNSSLKVHKRIHTGEKPYECDVCGKAYISHSSLINHKSTHPGKTPYTCNECGKAFFSSRTLISHKRVHLGEKPFKCVECGKSFSYSSLLSQHKRIHTGEKPYVCDRCGKAFRNSSGLTVHKRIHTGEKPYQCDLCGKAYISHSSLINHKSVHRGKQPYNCECGKSFNYRSVLDQHKRIHTGKKPYRCNECGKAFNIRSNLTKHKRTHTGEEFLNVTNVGSHSGTSQRRTYEEGGNALDGTRMRMPL
SIO_010081: ZFP62
subclass of: SO_0000673
so part of: ZFP62
location: 6246717..6249419
location: region:6246717-6249419:1
so has part: feature:6246717-6249419:1:exon

XP_012593999.2
type: Protein
SIO_000068: ncbiprotein

position:6246717:1
position: 6246717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6246717-6249419:1:exon

LOC105856688
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105856688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6277287..6313091
location: region:6277287-6313091:1
so has part: feature:6277287-6313091:1:exon
subclass of: SO_0000010

105856688
type: Gene
SIO_000068: ncbigene

position:6277287:1
position: 6277287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6313091:1
position: 6313091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6277287-6313091:1:exon

LOC105856688
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105856688
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 248 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012738540.2
SIO_010081: LOC105856688
subclass of: SO_0000673
so part of: LOC105856688
location: join(6277287..6279364,6280969..6281398,6310619..6313091)
location: region:6277287-6313091:1
so has part: feature:6277287-6279364:1:exon
so has part: feature:6280969-6281398:1:exon
so has part: feature:6310619-6313091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6277287-6279364:1:exon

position:6279364:1
position: 6279364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6280969-6281398:1:exon

position:6280969:1
position: 6280969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6281398:1
position: 6281398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6310619-6313091:1:exon

position:6310619:1
position: 6310619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105856688
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105856688
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 248 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012738542.1
SIO_010081: LOC105856688
subclass of: SO_0000673
so part of: LOC105856688
location: join(6279845..6279914,6280969..6281398,6310619..6313091)
location: region:6279845-6313091:1
so has part: feature:6279845-6279914:1:exon
so has part: feature:6280969-6281398:1:exon
so has part: feature:6310619-6313091:1:exon

position:6279845:1
position: 6279845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6279845-6279914:1:exon

position:6279914:1
position: 6279914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6280969-6281398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6310619-6313091:1:exon

LOC105856688
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105856688
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 266 ESTs, 25 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012738538.1
SIO_010081: LOC105856688
subclass of: SO_0000673
so part of: LOC105856688
location: join(6279921..6280066,6280969..6281398,6310619..6313091)
location: region:6279921-6313091:1
so has part: feature:6279921-6280066:1:exon
so has part: feature:6280969-6281398:1:exon
so has part: feature:6310619-6313091:1:exon

position:6279921:1
position: 6279921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6279921-6280066:1:exon

position:6280066:1
position: 6280066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6280969-6281398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6310619-6313091:1:exon

LOC105856688
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: LOC105856688
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_001147268.1
SIO_010081: LOC105856688
so part of: LOC105856688
location: join(6279921..6280066,6280969..6281398,6297816..6297847)
location: region:6279921-6297847:1
so has part: feature:6279921-6280066:1:exon
so has part: feature:6280969-6281398:1:exon
so has part: feature:6297816-6297847:1:exon

position:6297847:1
position: 6297847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6279921-6280066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6280969-6281398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6297816-6297847:1:exon

position:6297816:1
position: 6297816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105856688
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: LOC105856688
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_001147269.1
SIO_010081: LOC105856688
so part of: LOC105856688
location: join(6279921..6280066,6280969..6281398,6297163..6297307)
location: region:6279921-6297307:1
so has part: feature:6279921-6280066:1:exon
so has part: feature:6280969-6281398:1:exon
so has part: feature:6297163-6297307:1:exon

position:6297307:1
position: 6297307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6279921-6280066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6280969-6281398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6297163-6297307:1:exon

position:6297163:1
position: 6297163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105856688
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105856688
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 248 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012738539.2
SIO_010081: LOC105856688
subclass of: SO_0000673
so part of: LOC105856688
location: join(6280289..6280788,6280969..6281398,6310619..6313091)
location: region:6280289-6313091:1
so has part: feature:6280289-6280788:1:exon
so has part: feature:6280969-6281398:1:exon
so has part: feature:6310619-6313091:1:exon

position:6280289:1
position: 6280289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6280289-6280788:1:exon

position:6280788:1
position: 6280788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6280969-6281398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6310619-6313091:1:exon

LOC105856688
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105856688
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 248 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012738541.2
SIO_010081: LOC105856688
subclass of: SO_0000673
so part of: LOC105856688
location: join(6280844..6280867,6280969..6281398,6310619..6313091)
location: region:6280844-6313091:1
so has part: feature:6280844-6280867:1:exon
so has part: feature:6280969-6281398:1:exon
so has part: feature:6310619-6313091:1:exon

position:6280844:1
position: 6280844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6280844-6280867:1:exon

position:6280867:1
position: 6280867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6280969-6281398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6310619-6313091:1:exon

LOC105856697
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105856697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6297912..6299115
location: region:6297912-6299115:1
so has part: feature:6297912-6299115:1:exon

105856697
type: Gene
SIO_000068: ncbigene

position:6297912:1
position: 6297912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6299115:1
position: 6299115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6297912-6299115:1:exon

LOC105856697
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105856697
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC105856697
subclass of: SO_0000673
so part of: LOC105856697
location: 6297912..6299115
location: region:6297912-6299115:1
so has part: feature:6297912-6299115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6297912-6299115:1:exon

LOC105856688
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105856688
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 241 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012738544.2
SIO_010081: LOC105856688
subclass of: SO_0000673
so part of: LOC105856688
location: join(6300449..6300681,6309956..6310131,6310619..6313091)
location: region:6300449-6313091:1
so has part: feature:6300449-6300681:1:exon
so has part: feature:6309956-6310131:1:exon
so has part: feature:6310619-6313091:1:exon

position:6300449:1
position: 6300449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6300449-6300681:1:exon

position:6300681:1
position: 6300681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6309956-6310131:1:exon

position:6309956:1
position: 6309956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6310131:1
position: 6310131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6310619-6313091:1:exon

LOC105856688
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105856688
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 241 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012738543.2
SIO_010081: LOC105856688
subclass of: SO_0000673
so part of: LOC105856688
location: join(6300449..6300681,6310619..6313091)
location: region:6300449-6313091:1
so has part: feature:6300449-6300681:1:exon
so has part: feature:6310619-6313091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6300449-6300681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6310619-6313091:1:exon

LOC105856688
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105856688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
translation: MLKKQSAGLVLWGAILFVAWNALLLLFFWTRPAPGRPPSDSALDDDPASLTREVIRLAQDAEVELERQRGLLQQIREHRALWSQRRGVPTPAPPRVPVTPPPAVIPILVIACDRSTVRRCLDKLLHYRPSAERFPVIVSQDCGHEETAQVIASYGSAVRHIRQPDLSSIAVPPDHRKFQGYYKIARHYRWALSQIFHEFKFPAAVVVEDDLEVAPDFFEYFQATYPLLRADPSLWCVSAWNDNGKEQMVDSSKPELLYRTDFFPGLGWLLLAELWAELEPKWPKAFWDDWMRRPEQRKGRACIRPEISRTMTFGRKGVSHGQFFDQHLKFIKLNQQFVHFTRLDLSHLQREAYDRDFLARVYGAPQLQVETVKTNDRKELGEVRVQYTGRDSFKAFAKALGVMDDLKSGVPRAGYRGIVTFQFRGRRVHLAPPQTWDGYDPSWN
SIO_010081: LOC105856688
subclass of: SO_0000673
so part of: LOC105856688
location: 6310719..6312053
location: region:6310719-6312053:1
so has part: feature:6310719-6312053:1:exon

XP_012593992.1
type: Protein
SIO_000068: ncbiprotein

position:6310719:1
position: 6310719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6312053:1
position: 6312053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6310719-6312053:1:exon

LOC105856688
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105856688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
translation: MLKKQSAGLVLWGAILFVAWNALLLLFFWTRPAPGRPPSDSALDDDPASLTREVIRLAQDAEVELERQRGLLQQIREHRALWSQRRGVPTPAPPRVPVTPPPAVIPILVIACDRSTVRRCLDKLLHYRPSAERFPVIVSQDCGHEETAQVIASYGSAVRHIRQPDLSSIAVPPDHRKFQGYYKIARHYRWALSQIFHEFKFPAAVVVEDDLEVAPDFFEYFQATYPLLRADPSLWCVSAWNDNGKEQMVDSSKPELLYRTDFFPGLGWLLLAELWAELEPKWPKAFWDDWMRRPEQRKGRACIRPEISRTMTFGRKGVSHGQFFDQHLKFIKLNQQFVHFTRLDLSHLQREAYDRDFLARVYGAPQLQVETVKTNDRKELGEVRVQYTGRDSFKAFAKALGVMDDLKSGVPRAGYRGIVTFQFRGRRVHLAPPQTWDGYDPSWN
SIO_010081: LOC105856688
subclass of: SO_0000673
so part of: LOC105856688
location: 6310719..6312053
location: region:6310719-6312053:1
so has part: feature:6310719-6312053:1:exon

XP_012593993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6310719-6312053:1:exon

LOC105856688
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105856688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
translation: MLKKQSAGLVLWGAILFVAWNALLLLFFWTRPAPGRPPSDSALDDDPASLTREVIRLAQDAEVELERQRGLLQQIREHRALWSQRRGVPTPAPPRVPVTPPPAVIPILVIACDRSTVRRCLDKLLHYRPSAERFPVIVSQDCGHEETAQVIASYGSAVRHIRQPDLSSIAVPPDHRKFQGYYKIARHYRWALSQIFHEFKFPAAVVVEDDLEVAPDFFEYFQATYPLLRADPSLWCVSAWNDNGKEQMVDSSKPELLYRTDFFPGLGWLLLAELWAELEPKWPKAFWDDWMRRPEQRKGRACIRPEISRTMTFGRKGVSHGQFFDQHLKFIKLNQQFVHFTRLDLSHLQREAYDRDFLARVYGAPQLQVETVKTNDRKELGEVRVQYTGRDSFKAFAKALGVMDDLKSGVPRAGYRGIVTFQFRGRRVHLAPPQTWDGYDPSWN
SIO_010081: LOC105856688
subclass of: SO_0000673
so part of: LOC105856688
location: 6310719..6312053
location: region:6310719-6312053:1
so has part: feature:6310719-6312053:1:exon

XP_012593994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6310719-6312053:1:exon

LOC105856688
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105856688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
translation: MLKKQSAGLVLWGAILFVAWNALLLLFFWTRPAPGRPPSDSALDDDPASLTREVIRLAQDAEVELERQRGLLQQIREHRALWSQRRGVPTPAPPRVPVTPPPAVIPILVIACDRSTVRRCLDKLLHYRPSAERFPVIVSQDCGHEETAQVIASYGSAVRHIRQPDLSSIAVPPDHRKFQGYYKIARHYRWALSQIFHEFKFPAAVVVEDDLEVAPDFFEYFQATYPLLRADPSLWCVSAWNDNGKEQMVDSSKPELLYRTDFFPGLGWLLLAELWAELEPKWPKAFWDDWMRRPEQRKGRACIRPEISRTMTFGRKGVSHGQFFDQHLKFIKLNQQFVHFTRLDLSHLQREAYDRDFLARVYGAPQLQVETVKTNDRKELGEVRVQYTGRDSFKAFAKALGVMDDLKSGVPRAGYRGIVTFQFRGRRVHLAPPQTWDGYDPSWN
SIO_010081: LOC105856688
subclass of: SO_0000673
so part of: LOC105856688
location: 6310719..6312053
location: region:6310719-6312053:1
so has part: feature:6310719-6312053:1:exon

XP_012593995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6310719-6312053:1:exon

LOC105856688
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105856688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
translation: MLKKQSAGLVLWGAILFVAWNALLLLFFWTRPAPGRPPSDSALDDDPASLTREVIRLAQDAEVELERQRGLLQQIREHRALWSQRRGVPTPAPPRVPVTPPPAVIPILVIACDRSTVRRCLDKLLHYRPSAERFPVIVSQDCGHEETAQVIASYGSAVRHIRQPDLSSIAVPPDHRKFQGYYKIARHYRWALSQIFHEFKFPAAVVVEDDLEVAPDFFEYFQATYPLLRADPSLWCVSAWNDNGKEQMVDSSKPELLYRTDFFPGLGWLLLAELWAELEPKWPKAFWDDWMRRPEQRKGRACIRPEISRTMTFGRKGVSHGQFFDQHLKFIKLNQQFVHFTRLDLSHLQREAYDRDFLARVYGAPQLQVETVKTNDRKELGEVRVQYTGRDSFKAFAKALGVMDDLKSGVPRAGYRGIVTFQFRGRRVHLAPPQTWDGYDPSWN
SIO_010081: LOC105856688
subclass of: SO_0000673
so part of: LOC105856688
location: 6310719..6312053
location: region:6310719-6312053:1
so has part: feature:6310719-6312053:1:exon

XP_012593996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6310719-6312053:1:exon

LOC105856688
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105856688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
translation: MLKKQSAGLVLWGAILFVAWNALLLLFFWTRPAPGRPPSDSALDDDPASLTREVIRLAQDAEVELERQRGLLQQIREHRALWSQRRGVPTPAPPRVPVTPPPAVIPILVIACDRSTVRRCLDKLLHYRPSAERFPVIVSQDCGHEETAQVIASYGSAVRHIRQPDLSSIAVPPDHRKFQGYYKIARHYRWALSQIFHEFKFPAAVVVEDDLEVAPDFFEYFQATYPLLRADPSLWCVSAWNDNGKEQMVDSSKPELLYRTDFFPGLGWLLLAELWAELEPKWPKAFWDDWMRRPEQRKGRACIRPEISRTMTFGRKGVSHGQFFDQHLKFIKLNQQFVHFTRLDLSHLQREAYDRDFLARVYGAPQLQVETVKTNDRKELGEVRVQYTGRDSFKAFAKALGVMDDLKSGVPRAGYRGIVTFQFRGRRVHLAPPQTWDGYDPSWN
SIO_010081: LOC105856688
subclass of: SO_0000673
so part of: LOC105856688
location: 6310719..6312053
location: region:6310719-6312053:1
so has part: feature:6310719-6312053:1:exon

XP_012593997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6310719-6312053:1:exon

LOC105856688
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105856688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
translation: MLKKQSAGLVLWGAILFVAWNALLLLFFWTRPAPGRPPSDSALDDDPASLTREVIRLAQDAEVELERQRGLLQQIREHRALWSQRRGVPTPAPPRVPVTPPPAVIPILVIACDRSTVRRCLDKLLHYRPSAERFPVIVSQDCGHEETAQVIASYGSAVRHIRQPDLSSIAVPPDHRKFQGYYKIARHYRWALSQIFHEFKFPAAVVVEDDLEVAPDFFEYFQATYPLLRADPSLWCVSAWNDNGKEQMVDSSKPELLYRTDFFPGLGWLLLAELWAELEPKWPKAFWDDWMRRPEQRKGRACIRPEISRTMTFGRKGVSHGQFFDQHLKFIKLNQQFVHFTRLDLSHLQREAYDRDFLARVYGAPQLQVETVKTNDRKELGEVRVQYTGRDSFKAFAKALGVMDDLKSGVPRAGYRGIVTFQFRGRRVHLAPPQTWDGYDPSWN
SIO_010081: LOC105856688
subclass of: SO_0000673
so part of: LOC105856688
location: 6310719..6312053
location: region:6310719-6312053:1
so has part: feature:6310719-6312053:1:exon

XP_012593998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6310719-6312053:1:exon

LOC105870030
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105870030
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6378478..6457842)
location: region:6378478-6457842:-1
so has part: feature:6378478-6457842:-1:exon
subclass of: SO_0000010

105870030
type: Gene
SIO_000068: ncbigene

position:6378478:-1
position: 6378478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6457842:-1
position: 6457842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6378478-6457842:-1:exon

LOC105870030
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105870030
product: olfactory receptor 56-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284539.1
SIO_010081: LOC105870030
subclass of: SO_0000673
so part of: LOC105870030
location: complement(join(6378478..6379221,6451999..6452166,6457726..6457842))
location: region:6378478-6457842:-1
so has part: feature:6457726-6457842:-1:exon
so has part: feature:6451999-6452166:-1:exon
so has part: feature:6378478-6379221:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6457726-6457842:-1:exon

position:6457726:-1
position: 6457726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6451999-6452166:-1:exon

position:6451999:-1
position: 6451999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6452166:-1
position: 6452166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6378478-6379221:-1:exon

position:6379221:-1
position: 6379221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105870030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105870030
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 56-like
translation: MLVQFLDDRNTFPNFEHLAYWQIEFNNIAAVTVFFVWIKLSVLAIGINIYRSSSVEMLVQFLDDRNTFPNFEHLAYWQIEFNNIAAVTVFFVWIKLMDLMLVCSVVPKMAANFLSGRKSISFAGCGTQVGFFVSLVGSEGLLLGLMAYDRYVAISRPLHYPVLMTQRVCAQIAGSSWVFGILDGMIQMAAAMTFPYCGSRNVDHFFCEVPALLKLACADTSLFDTLLFACCVFMLLLPFSIIVASYARILGTVLRMHSVQARKKALATCSSHLTAVSLFYGAAMFIYLRPRSYRVPGHDKVVSVFYTVLTPMLNPLIYSLRNREVTGALRKGLGRCRVGGRH
SIO_010081: LOC105870030
subclass of: SO_0000673
so part of: LOC105870030
location: complement(join(6378478..6379221,6451999..6452166,6457726..6457842))
location: region:6378478-6457842:-1
so has part: feature:6457726-6457842:-1:exon
so has part: feature:6451999-6452166:-1:exon
so has part: feature:6378478-6379221:-1:exon

XP_020140128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6457726-6457842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6451999-6452166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6378478-6379221:-1:exon

LOC105876378
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105876378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6567100..6604777
location: region:6567100-6604777:1
so has part: feature:6567100-6604777:1:exon
subclass of: SO_0000010

105876378
type: Gene
SIO_000068: ncbigene

position:6567100:1
position: 6567100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6604777:1
position: 6604777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6567100-6604777:1:exon

LOC105876378
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105876378
product: AF4/FMR2 family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284540.1
SIO_010081: LOC105876378
subclass of: SO_0000673
so part of: LOC105876378
location: join(6567100..6567245,6589664..6589841,6593993..6594309,6594836..6594925,6595089..6595149,6596017..6596153,6597083..6597151,6598053..6598190,6601809..6602026,6603291..6604777)
location: region:6567100-6604777:1
so has part: feature:6567100-6567245:1:exon
so has part: feature:6589664-6589841:1:exon
so has part: feature:6593993-6594309:1:exon
so has part: feature:6594836-6594925:1:exon
so has part: feature:6595089-6595149:1:exon
so has part: feature:6596017-6596153:1:exon
so has part: feature:6597083-6597151:1:exon
so has part: feature:6598053-6598190:1:exon
so has part: feature:6601809-6602026:1:exon
so has part: feature:6603291-6604777:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6567100-6567245:1:exon

position:6567245:1
position: 6567245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6589664-6589841:1:exon

position:6589664:1
position: 6589664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6589841:1
position: 6589841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6593993-6594309:1:exon

position:6593993:1
position: 6593993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6594309:1
position: 6594309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6594836-6594925:1:exon

position:6594836:1
position: 6594836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6594925:1
position: 6594925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6595089-6595149:1:exon

position:6595089:1
position: 6595089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6595149:1
position: 6595149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6596017-6596153:1:exon

position:6596017:1
position: 6596017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6596153:1
position: 6596153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6597083-6597151:1:exon

position:6597083:1
position: 6597083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6597151:1
position: 6597151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6598053-6598190:1:exon

position:6598053:1
position: 6598053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6598190:1
position: 6598190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6601809-6602026:1:exon

position:6601809:1
position: 6601809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6602026:1
position: 6602026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6603291-6604777:1:exon

position:6603291:1
position: 6603291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105876378
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105876378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AF4/FMR2 family member 1
translation: MAGKSKPKNGWDRLPGVLDPQGCARFECFAAREAYVDLAEAAKDVLIFSRRPEPEAAHNGPGGADACGQDPQSASAAKERHKDFLRPPSTEKVRASSGSPRDGTGQAKVAVSNLWSAARLVHLSFPHPSDKTVSPGGACSAKLQRLRPAWVAGKRPIRLHDNDPAACRPASEADRTALRSCATSTAFTLDRHDRLPLFMHRDNFLREDAPRPAGDPRDSAQPFPVPSLPNGHARPGKPPGKPDRQQADDHMREAKRLKQKAESMTDKVGKAFKYLEAVLAFIECGVAMESDSPACRAAYSVYADAVDLIKFVMSLKPFSEATSTQEKIFAVLCMRCQSILNMAMFRCKKDIAIKYSRTLSDHFVTSSRAAQAPSPCLARSSGAPSPRSPAPSQASGAPGSAPAAMQSVTSPYVSTPAAIQSMTSSYVAITSHVLAAFDLWERADALTRRDADFFSRLSASACSLALGSSLADLVRYTRQGFQQLR
SIO_010081: LOC105876378
subclass of: SO_0000673
so part of: LOC105876378
location: join(6567100..6567245,6589664..6589841,6593993..6594309,6594836..6594925,6595089..6595149,6596017..6596153,6597083..6597151,6598053..6598190,6601809..6602026,6603291..6603394)
location: region:6567100-6603394:1
so has part: feature:6567100-6567245:1:exon
so has part: feature:6589664-6589841:1:exon
so has part: feature:6593993-6594309:1:exon
so has part: feature:6594836-6594925:1:exon
so has part: feature:6595089-6595149:1:exon
so has part: feature:6596017-6596153:1:exon
so has part: feature:6597083-6597151:1:exon
so has part: feature:6598053-6598190:1:exon
so has part: feature:6601809-6602026:1:exon
so has part: feature:6603291-6603394:1:exon

XP_020140129.1
type: Protein
SIO_000068: ncbiprotein

position:6603394:1
position: 6603394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6567100-6567245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6589664-6589841:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6593993-6594309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6594836-6594925:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6595089-6595149:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6596017-6596153:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6597083-6597151:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6598053-6598190:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6601809-6602026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6603291-6603394:1:exon

KLHL8
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: KLHL8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6627226..6661649)
location: region:6627226-6661649:-1
so has part: feature:6627226-6661649:-1:exon
subclass of: SO_0000010

105876371
type: Gene
SIO_000068: ncbigene

position:6627226:-1
position: 6627226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6661649:-1
position: 6661649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6627226-6661649:-1:exon

KLHL8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: KLHL8
product: kelch like family member 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_020284562.1
SIO_010081: KLHL8
subclass of: SO_0000673
so part of: KLHL8
location: complement(join(6627226..6630433,6631284..6631485,6632704..6632863,6633529..6633697,6640793..6640904,6642659..6642802,6645994..6646180,6648810..6649358,6651722..6652079,6661585..6661649))
location: region:6627226-6661649:-1
so has part: feature:6661585-6661649:-1:exon
so has part: feature:6651722-6652079:-1:exon
so has part: feature:6648810-6649358:-1:exon
so has part: feature:6645994-6646180:-1:exon
so has part: feature:6642659-6642802:-1:exon
so has part: feature:6640793-6640904:-1:exon
so has part: feature:6633529-6633697:-1:exon
so has part: feature:6632704-6632863:-1:exon
so has part: feature:6631284-6631485:-1:exon
so has part: feature:6627226-6630433:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6661585-6661649:-1:exon

position:6661585:-1
position: 6661585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6651722-6652079:-1:exon

position:6651722:-1
position: 6651722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6652079:-1
position: 6652079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6648810-6649358:-1:exon

position:6648810:-1
position: 6648810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6649358:-1
position: 6649358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6645994-6646180:-1:exon

position:6645994:-1
position: 6645994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6646180:-1
position: 6646180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6642659-6642802:-1:exon

position:6642659:-1
position: 6642659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6642802:-1
position: 6642802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6640793-6640904:-1:exon

position:6640793:-1
position: 6640793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6640904:-1
position: 6640904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6633529-6633697:-1:exon

position:6633529:-1
position: 6633529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6633697:-1
position: 6633697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6632704-6632863:-1:exon

position:6632704:-1
position: 6632704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6632863:-1
position: 6632863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6631284-6631485:-1:exon

position:6631284:-1
position: 6631284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6631485:-1
position: 6631485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6627226-6630433:-1:exon

position:6630433:-1
position: 6630433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHL8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: KLHL8
product: kelch like family member 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_012774062.2
SIO_010081: KLHL8
subclass of: SO_0000673
so part of: KLHL8
location: complement(join(6627226..6630433,6631284..6631485,6632704..6632863,6633529..6633697,6640793..6640904,6642659..6642802,6645994..6646180,6648810..6649358,6651722..6652079,6660160..6660408,6661585..6661649))
location: region:6627226-6661649:-1
so has part: feature:6661585-6661649:-1:exon
so has part: feature:6660160-6660408:-1:exon
so has part: feature:6651722-6652079:-1:exon
so has part: feature:6648810-6649358:-1:exon
so has part: feature:6645994-6646180:-1:exon
so has part: feature:6642659-6642802:-1:exon
so has part: feature:6640793-6640904:-1:exon
so has part: feature:6633529-6633697:-1:exon
so has part: feature:6632704-6632863:-1:exon
so has part: feature:6631284-6631485:-1:exon
so has part: feature:6627226-6630433:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6661585-6661649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6660160-6660408:-1:exon

position:6660160:-1
position: 6660160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6660408:-1
position: 6660408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6651722-6652079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6648810-6649358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6645994-6646180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6642659-6642802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6640793-6640904:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6633529-6633697:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6632704-6632863:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6631284-6631485:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6627226-6630433:-1:exon

KLHL8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: KLHL8
product: kelch like family member 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_020284561.1
SIO_010081: KLHL8
subclass of: SO_0000673
so part of: KLHL8
location: complement(join(6627226..6630433,6631284..6631485,6632704..6632863,6633529..6633697,6640793..6640904,6642659..6642802,6645994..6646180,6648810..6649358,6651722..6652079,6656393..6656460))
location: region:6627226-6656460:-1
so has part: feature:6656393-6656460:-1:exon
so has part: feature:6651722-6652079:-1:exon
so has part: feature:6648810-6649358:-1:exon
so has part: feature:6645994-6646180:-1:exon
so has part: feature:6642659-6642802:-1:exon
so has part: feature:6640793-6640904:-1:exon
so has part: feature:6633529-6633697:-1:exon
so has part: feature:6632704-6632863:-1:exon
so has part: feature:6631284-6631485:-1:exon
so has part: feature:6627226-6630433:-1:exon

position:6656460:-1
position: 6656460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6656393-6656460:-1:exon

position:6656393:-1
position: 6656393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6651722-6652079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6648810-6649358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6645994-6646180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6642659-6642802:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6640793-6640904:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6633529-6633697:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6632704-6632863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6631284-6631485:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6627226-6630433:-1:exon

KLHL8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: KLHL8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 8
translation: MASDPVNGKQARNHFTKGKRQQQHQQTKNRSSVSDGGGEDSFIFEANEAWKDFHGSLLQFYENGELCDVTLKVGSKLISCHKLVLACVIPYFRAMFLSEMAEAKQTLIEIRDFDGDAIEDLVKFVYSSRLTLTVDNVQPLLYAACILQVELVARACCEYMKLHFHPSNCLAVRAFAESHNRTDLMDMADQYACEHFTEVVECEDFVSVSPQHLHKLLSSSDLNIENEKQVYSAAIKWLLANPQHHSKWLDETLAQVRLPLLPVDFLMGVVAKEQIVKQNLKCRDLLDEARNYHLHLSSRAVPDFEYSVRTTPRKHTAGVLFCVGGRGGSGDPFRSIECYSINKNSWFFGPEMNSRRRHVGVISVEGKVYAVGGHDGNEHLGSMEMFDPLTNKWMMKASMNTKRRGIALASLGGPIYAIGGLDDNTCFNDVERYDIESDQWSAVAPMNTPRGGVGSVALLNHVYAVGGNDGVASLSSVERYDPHLDKWIEVKEMGQRRAGNGVSELHGCLYVVGGFDDNSPLSSVERYDPRSNKWDYVAALTTPRGGVGIATVMGRIFAVGGHNGNAYLNTVEAFDPVLNRWELVGSVSHCRAGAGVAVCACLTSQIRDVGRGSNNVVDCM
SIO_010081: KLHL8
subclass of: SO_0000673
so part of: KLHL8
location: complement(join(6630310..6630433,6631284..6631485,6632704..6632863,6633529..6633697,6640793..6640904,6642659..6642802,6645994..6646180,6648810..6649358,6651722..6651937))
location: region:6630310-6651937:-1
so has part: feature:6651722-6651937:-1:exon
so has part: feature:6648810-6649358:-1:exon
so has part: feature:6645994-6646180:-1:exon
so has part: feature:6642659-6642802:-1:exon
so has part: feature:6640793-6640904:-1:exon
so has part: feature:6633529-6633697:-1:exon
so has part: feature:6632704-6632863:-1:exon
so has part: feature:6631284-6631485:-1:exon
so has part: feature:6630310-6630433:-1:exon

XP_012629516.2
type: Protein
SIO_000068: ncbiprotein

position:6630310:-1
position: 6630310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6651937:-1
position: 6651937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6651722-6651937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6648810-6649358:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6645994-6646180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6642659-6642802:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6640793-6640904:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6633529-6633697:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6632704-6632863:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6631284-6631485:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6630310-6630433:-1:exon

KLHL8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: KLHL8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 8
translation: MASDPVNGKQARNHFTKGKRQQQHQQTKNRSSVSDGGGEDSFIFEANEAWKDFHGSLLQFYENGELCDVTLKVGSKLISCHKLVLACVIPYFRAMFLSEMAEAKQTLIEIRDFDGDAIEDLVKFVYSSRLTLTVDNVQPLLYAACILQVELVARACCEYMKLHFHPSNCLAVRAFAESHNRTDLMDMADQYACEHFTEVVECEDFVSVSPQHLHKLLSSSDLNIENEKQVYSAAIKWLLANPQHHSKWLDETLAQVRLPLLPVDFLMGVVAKEQIVKQNLKCRDLLDEARNYHLHLSSRAVPDFEYSVRTTPRKHTAGVLFCVGGRGGSGDPFRSIECYSINKNSWFFGPEMNSRRRHVGVISVEGKVYAVGGHDGNEHLGSMEMFDPLTNKWMMKASMNTKRRGIALASLGGPIYAIGGLDDNTCFNDVERYDIESDQWSAVAPMNTPRGGVGSVALLNHVYAVGGNDGVASLSSVERYDPHLDKWIEVKEMGQRRAGNGVSELHGCLYVVGGFDDNSPLSSVERYDPRSNKWDYVAALTTPRGGVGIATVMGRIFAVGGHNGNAYLNTVEAFDPVLNRWELVGSVSHCRAGAGVAVCACLTSQIRDVGRGSNNVVDCM
SIO_010081: KLHL8
subclass of: SO_0000673
so part of: KLHL8
location: complement(join(6630310..6630433,6631284..6631485,6632704..6632863,6633529..6633697,6640793..6640904,6642659..6642802,6645994..6646180,6648810..6649358,6651722..6651937))
location: region:6630310-6651937:-1
so has part: feature:6651722-6651937:-1:exon
so has part: feature:6648810-6649358:-1:exon
so has part: feature:6645994-6646180:-1:exon
so has part: feature:6642659-6642802:-1:exon
so has part: feature:6640793-6640904:-1:exon
so has part: feature:6633529-6633697:-1:exon
so has part: feature:6632704-6632863:-1:exon
so has part: feature:6631284-6631485:-1:exon
so has part: feature:6630310-6630433:-1:exon

XP_020140150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6651722-6651937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6648810-6649358:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6645994-6646180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6642659-6642802:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6640793-6640904:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6633529-6633697:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6632704-6632863:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6631284-6631485:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6630310-6630433:-1:exon

KLHL8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: KLHL8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 8
translation: MASDPVNGKQARNHFTKGKRQQQHQQTKNRSSVSDGGGEDSFIFEANEAWKDFHGSLLQFYENGELCDVTLKVGSKLISCHKLVLACVIPYFRAMFLSEMAEAKQTLIEIRDFDGDAIEDLVKFVYSSRLTLTVDNVQPLLYAACILQVELVARACCEYMKLHFHPSNCLAVRAFAESHNRTDLMDMADQYACEHFTEVVECEDFVSVSPQHLHKLLSSSDLNIENEKQVYSAAIKWLLANPQHHSKWLDETLAQVRLPLLPVDFLMGVVAKEQIVKQNLKCRDLLDEARNYHLHLSSRAVPDFEYSVRTTPRKHTAGVLFCVGGRGGSGDPFRSIECYSINKNSWFFGPEMNSRRRHVGVISVEGKVYAVGGHDGNEHLGSMEMFDPLTNKWMMKASMNTKRRGIALASLGGPIYAIGGLDDNTCFNDVERYDIESDQWSAVAPMNTPRGGVGSVALLNHVYAVGGNDGVASLSSVERYDPHLDKWIEVKEMGQRRAGNGVSELHGCLYVVGGFDDNSPLSSVERYDPRSNKWDYVAALTTPRGGVGIATVMGRIFAVGGHNGNAYLNTVEAFDPVLNRWELVGSVSHCRAGAGVAVCACLTSQIRDVGRGSNNVVDCM
SIO_010081: KLHL8
subclass of: SO_0000673
so part of: KLHL8
location: complement(join(6630310..6630433,6631284..6631485,6632704..6632863,6633529..6633697,6640793..6640904,6642659..6642802,6645994..6646180,6648810..6649358,6651722..6651937))
location: region:6630310-6651937:-1
so has part: feature:6651722-6651937:-1:exon
so has part: feature:6648810-6649358:-1:exon
so has part: feature:6645994-6646180:-1:exon
so has part: feature:6642659-6642802:-1:exon
so has part: feature:6640793-6640904:-1:exon
so has part: feature:6633529-6633697:-1:exon
so has part: feature:6632704-6632863:-1:exon
so has part: feature:6631284-6631485:-1:exon
so has part: feature:6630310-6630433:-1:exon

XP_020140151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6651722-6651937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6648810-6649358:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6645994-6646180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6642659-6642802:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6640793-6640904:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6633529-6633697:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6632704-6632863:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6631284-6631485:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6630310-6630433:-1:exon

LOC105876370
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105876370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6719442..6734480)
location: region:6719442-6734480:-1
so has part: feature:6719442-6734480:-1:exon
subclass of: SO_0000010

105876370
type: Gene
SIO_000068: ncbigene

position:6719442:-1
position: 6719442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6734480:-1
position: 6734480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6719442-6734480:-1:exon

LOC105876370
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105876370
product: 17-beta-hydroxysteroid dehydrogenase 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 13 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012774061.2
SIO_010081: LOC105876370
subclass of: SO_0000673
so part of: LOC105876370
location: complement(join(6719442..6719809,6723825..6723941,6726761..6726898,6728203..6728309,6730525..6730656,6731909..6732016,6734087..6734480))
location: region:6719442-6734480:-1
so has part: feature:6734087-6734480:-1:exon
so has part: feature:6731909-6732016:-1:exon
so has part: feature:6730525-6730656:-1:exon
so has part: feature:6728203-6728309:-1:exon
so has part: feature:6726761-6726898:-1:exon
so has part: feature:6723825-6723941:-1:exon
so has part: feature:6719442-6719809:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6734087-6734480:-1:exon

position:6734087:-1
position: 6734087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6731909-6732016:-1:exon

position:6731909:-1
position: 6731909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6732016:-1
position: 6732016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6730525-6730656:-1:exon

position:6730525:-1
position: 6730525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6730656:-1
position: 6730656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6728203-6728309:-1:exon

position:6728203:-1
position: 6728203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6728309:-1
position: 6728309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6726761-6726898:-1:exon

position:6726761:-1
position: 6726761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6726898:-1
position: 6726898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6723825-6723941:-1:exon

position:6723825:-1
position: 6723825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6723941:-1
position: 6723941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6719442-6719809:-1:exon

position:6719809:-1
position: 6719809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105876370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105876370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 17-beta-hydroxysteroid dehydrogenase 13
translation: MNIVLDILLLLLTIVYSYLESLVKLFIPQRRKSVAGEIVLITGAGHGIGRLTAHEFAKRQSRLVLWDINKRGVEETAAQCRKLGATVHAFVVDCSNREAIYSSVNQVKKEVGDVTIVVNNAGAIYPADLLSTKDEEIAKTFEVNILGHFWITKALLPSMMKRNHGHVVTVASLCGHGVIPYLIPYCSSKFAAVGFHRALTLELQALGKTGIKTSCLCPVFVNTGFTKNPSTRLWPVLETEKVARSLIDGILTNKKMIFVPSYIGICLILEKFLPERALAAINRVQDIQFEAVVGHKIKMK
SIO_010081: LOC105876370
subclass of: SO_0000673
so part of: LOC105876370
location: complement(join(6719719..6719809,6723825..6723941,6726761..6726898,6728203..6728309,6730525..6730656,6731909..6732016,6734087..6734296))
location: region:6719719-6734296:-1
so has part: feature:6734087-6734296:-1:exon
so has part: feature:6731909-6732016:-1:exon
so has part: feature:6730525-6730656:-1:exon
so has part: feature:6728203-6728309:-1:exon
so has part: feature:6726761-6726898:-1:exon
so has part: feature:6723825-6723941:-1:exon
so has part: feature:6719719-6719809:-1:exon

XP_012629515.1
type: Protein
SIO_000068: ncbiprotein

position:6719719:-1
position: 6719719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6734296:-1
position: 6734296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6734087-6734296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6731909-6732016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6730525-6730656:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6728203-6728309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6726761-6726898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6723825-6723941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6719719-6719809:-1:exon

LOC105876369
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105876369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6735700..6745680)
location: region:6735700-6745680:-1
so has part: feature:6735700-6745680:-1:exon
subclass of: SO_0000011

105876369
type: Gene
SIO_000068: ncbigene

position:6735700:-1
position: 6735700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6745680:-1
position: 6745680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6735700-6745680:-1:exon

LOC105876369
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105876369
product: uncharacterized LOC105876369
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001156432.1
SIO_010081: LOC105876369
subclass of: SO_0000673
so part of: LOC105876369
location: complement(join(6735700..6735796,6736787..6736921,6743933..6745680))
location: region:6735700-6745680:-1
so has part: feature:6743933-6745680:-1:exon
so has part: feature:6736787-6736921:-1:exon
so has part: feature:6735700-6735796:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6743933-6745680:-1:exon

position:6743933:-1
position: 6743933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6736787-6736921:-1:exon

position:6736787:-1
position: 6736787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6736921:-1
position: 6736921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6735700-6735796:-1:exon

position:6735796:-1
position: 6735796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105876368
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105876368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6748849..6785450)
location: region:6748849-6785450:-1
so has part: feature:6748849-6785450:-1:exon
subclass of: SO_0000010

105876368
type: Gene
SIO_000068: ncbigene

position:6748849:-1
position: 6748849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6785450:-1
position: 6785450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6748849-6785450:-1:exon

LOC105876368
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105876368
product: estradiol 17-beta-dehydrogenase 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 33 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012774060.2
SIO_010081: LOC105876368
subclass of: SO_0000673
so part of: LOC105876368
location: complement(join(6748849..6748998,6755701..6755838,6770444..6770550,6772866..6772997,6785164..6785271,6785409..6785450))
location: region:6748849-6785450:-1
so has part: feature:6785409-6785450:-1:exon
so has part: feature:6785164-6785271:-1:exon
so has part: feature:6772866-6772997:-1:exon
so has part: feature:6770444-6770550:-1:exon
so has part: feature:6755701-6755838:-1:exon
so has part: feature:6748849-6748998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6785409-6785450:-1:exon

position:6785409:-1
position: 6785409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6785164-6785271:-1:exon

position:6785164:-1
position: 6785164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6785271:-1
position: 6785271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6772866-6772997:-1:exon

position:6772866:-1
position: 6772866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6772997:-1
position: 6772997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6770444-6770550:-1:exon

position:6770444:-1
position: 6770444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6770550:-1
position: 6770550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6755701-6755838:-1:exon

position:6755701:-1
position: 6755701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6755838:-1
position: 6755838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6748849-6748998:-1:exon

position:6748998:-1
position: 6748998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105876368
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105876368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: estradiol 17-beta-dehydrogenase 11
translation: MFLYPCQKCHGIEETAAECKRLGARVHAYVVDCSDREDIYSSAKKVKAEVGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMMETNHGHIVTVASLAGHTVVPFLLAYCSSKFAAVGFHKALTDELAALERTGVKTTCLCPNFINTGFIKNPSTSLGPTLEPEQVVSSLMDGILTEKKMIFVPSSLGFLMVLER
SIO_010081: LOC105876368
subclass of: SO_0000673
so part of: LOC105876368
location: complement(join(6748878..6748998,6755701..6755838,6770444..6770550,6772866..6772997,6785164..6785271,6785409..6785435))
location: region:6748878-6785435:-1
so has part: feature:6785409-6785435:-1:exon
so has part: feature:6785164-6785271:-1:exon
so has part: feature:6772866-6772997:-1:exon
so has part: feature:6770444-6770550:-1:exon
so has part: feature:6755701-6755838:-1:exon
so has part: feature:6748878-6748998:-1:exon

XP_012629514.1
type: Protein
SIO_000068: ncbiprotein

position:6748878:-1
position: 6748878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6785435:-1
position: 6785435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6785409-6785435:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6785164-6785271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6772866-6772997:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6770444-6770550:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6755701-6755838:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6748878-6748998:-1:exon

NUDT9
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: NUDT9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6811789..6835511
location: region:6811789-6835511:1
so has part: feature:6811789-6835511:1:exon
subclass of: SO_0000010

105876366
type: Gene
SIO_000068: ncbigene

position:6811789:1
position: 6811789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6835511:1
position: 6835511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6811789-6835511:1:exon

NUDT9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NUDT9
product: nudix hydrolase 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 ESTs, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012774059.1
SIO_010081: NUDT9
subclass of: SO_0000673
so part of: NUDT9
location: join(6811789..6811963,6816151..6816390,6817121..6817216,6819502..6819588,6826164..6826275,6827943..6828089,6830128..6830212,6834697..6835511)
location: region:6811789-6835511:1
so has part: feature:6811789-6811963:1:exon
so has part: feature:6816151-6816390:1:exon
so has part: feature:6817121-6817216:1:exon
so has part: feature:6819502-6819588:1:exon
so has part: feature:6826164-6826275:1:exon
so has part: feature:6827943-6828089:1:exon
so has part: feature:6830128-6830212:1:exon
so has part: feature:6834697-6835511:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6811789-6811963:1:exon

position:6811963:1
position: 6811963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6816151-6816390:1:exon

position:6816151:1
position: 6816151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6816390:1
position: 6816390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6817121-6817216:1:exon

position:6817121:1
position: 6817121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6817216:1
position: 6817216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6819502-6819588:1:exon

position:6819502:1
position: 6819502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6819588:1
position: 6819588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6826164-6826275:1:exon

position:6826164:1
position: 6826164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6826275:1
position: 6826275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6827943-6828089:1:exon

position:6827943:1
position: 6827943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6828089:1
position: 6828089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6830128-6830212:1:exon

position:6830128:1
position: 6830128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6830212:1
position: 6830212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6834697-6835511:1:exon

position:6834697:1
position: 6834697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUDT9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NUDT9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribose pyrophosphatase, mitochondrial
translation: MAGRFLGKALAAASLSVALACAAVGSSCRRGVPAYRNSLSSCWFHRTSGTMSGSNGSKENSHNKARTSPYPGSKVERSQVPNEKVGWLVEWQDYNPVEYTAVSVLAGPRWADPQISERNFSPKFNEKDGHIERKSQNGLYEIENGRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDSSGNKIAHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKSSAEKRELEEQLHKLFSQEHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLSLEAGDDAGKVKWVDIGAKLKLYASHSQFIKLVAEKRDAHWSEDSEADCRGV
SIO_010081: NUDT9
subclass of: SO_0000673
so part of: NUDT9
location: join(6811857..6811963,6816151..6816390,6817121..6817216,6819502..6819588,6826164..6826275,6827943..6828089,6830128..6830212,6834697..6834875)
location: region:6811857-6834875:1
so has part: feature:6811857-6811963:1:exon
so has part: feature:6816151-6816390:1:exon
so has part: feature:6817121-6817216:1:exon
so has part: feature:6819502-6819588:1:exon
so has part: feature:6826164-6826275:1:exon
so has part: feature:6827943-6828089:1:exon
so has part: feature:6830128-6830212:1:exon
so has part: feature:6834697-6834875:1:exon

XP_012629513.1
type: Protein
SIO_000068: ncbiprotein

position:6811857:1
position: 6811857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6834875:1
position: 6834875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6811857-6811963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6816151-6816390:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6817121-6817216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6819502-6819588:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6826164-6826275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6827943-6828089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6830128-6830212:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6834697-6834875:1:exon

LOC105876365
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105876365
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6831964..6833090)
location: region:6831964-6833090:-1
so has part: feature:6831964-6833090:-1:exon

105876365
type: Gene
SIO_000068: ncbigene

position:6831964:-1
position: 6831964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6833090:-1
position: 6833090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6831964-6833090:-1:exon

LOC105876365
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105876365
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105876365
subclass of: SO_0000673
so part of: LOC105876365
location: complement(6831964..6833090)
location: region:6831964-6833090:-1
so has part: feature:6831964-6833090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6831964-6833090:-1:exon

SPARCL1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: SPARCL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6861195..6898608)
location: region:6861195-6898608:-1
so has part: feature:6861195-6898608:-1:exon
subclass of: SO_0000010

105876364
type: Gene
SIO_000068: ncbigene

position:6861195:-1
position: 6861195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6898608:-1
position: 6898608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6861195-6898608:-1:exon

SPARCL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SPARCL1
product: SPARC like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 718 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012774057.2
SIO_010081: SPARCL1
subclass of: SO_0000673
so part of: SPARCL1
location: complement(join(6861195..6861655,6865397..6865545,6866226..6866374,6867146..6867282,6869589..6869709,6870547..6870665,6871404..6871488,6872790..6873806,6874518..6874667,6878502..6878567,6898205..6898608))
location: region:6861195-6898608:-1
so has part: feature:6898205-6898608:-1:exon
so has part: feature:6878502-6878567:-1:exon
so has part: feature:6874518-6874667:-1:exon
so has part: feature:6872790-6873806:-1:exon
so has part: feature:6871404-6871488:-1:exon
so has part: feature:6870547-6870665:-1:exon
so has part: feature:6869589-6869709:-1:exon
so has part: feature:6867146-6867282:-1:exon
so has part: feature:6866226-6866374:-1:exon
so has part: feature:6865397-6865545:-1:exon
so has part: feature:6861195-6861655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6898205-6898608:-1:exon

position:6898205:-1
position: 6898205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6878502-6878567:-1:exon

position:6878502:-1
position: 6878502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6878567:-1
position: 6878567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6874518-6874667:-1:exon

position:6874518:-1
position: 6874518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6874667:-1
position: 6874667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6872790-6873806:-1:exon

position:6872790:-1
position: 6872790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6873806:-1
position: 6873806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6871404-6871488:-1:exon

position:6871404:-1
position: 6871404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6871488:-1
position: 6871488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6870547-6870665:-1:exon

position:6870547:-1
position: 6870547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6870665:-1
position: 6870665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6869589-6869709:-1:exon

position:6869589:-1
position: 6869589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6869709:-1
position: 6869709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6867146-6867282:-1:exon

position:6867146:-1
position: 6867146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6867282:-1
position: 6867282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6866226-6866374:-1:exon

position:6866226:-1
position: 6866226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6866374:-1
position: 6866374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6865397-6865545:-1:exon

position:6865397:-1
position: 6865397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6865545:-1
position: 6865545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6861195-6861655:-1:exon

position:6861655:-1
position: 6861655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPARCL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SPARCL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPARC-like protein 1
translation: MKTLLFFLYILGAAAAIPTNAKFLSDHSKPTAETGTPDNTATPILWDDDDAENEKETVESIEDNPNHEAEKSSILKSKGESQEQSAEQGESYSQDLGSKDPEDSDGDLSVNLGHTPTEGTLDLPEGTEEPPKEKLPENIHLPASDASSFEEPNNEESITELEENQEQPTSDSHHQLNRSNKHSQDLRDQGNQEQDPNIPNGEEEEEEEEEEEKEPGDVGAHVDNQEKEREFPKEHPGSQREDGNTQSDDILEESDQPTQVSKSQKEEFEQGNQDQEEGTSDTEMEEEDASDINRHIPGTEWQSQEGRPGLDAVSSSEENDKKTVPEALLLEPTDGGDVMPQNPGASDDGAEDGPKPSSRDDDLIPGQAFLEGERAQSNYHHSKDEEQREGAHGNESAETTGTGERPEAKKASNEDESSSNEDKSSSEDNGRLPSVDACMSFQCKRGHVCKADQQGRPHCVCQDPVACPPTKLLDQVCGTDNQTYASSCHLFATKCRMEGTKKGHQLQLDYFGACKSIPACTDFEVAQFPLRMRDWLKNILMQLYEANSEHTGYLNEKQRNKVKKIYLDEKRLLAGDHPIDLLLRDFKKNYHMYVYPVHWQFSELDQHPTDRVLTHSELAPLRASLVPMEHCITRFFEECDPNKDKHITLKEWGHCFGIKEEDIDENLLF
SIO_010081: SPARCL1
subclass of: SO_0000673
so part of: SPARCL1
location: complement(join(6861627..6861655,6865397..6865545,6866226..6866374,6867146..6867282,6869589..6869709,6870547..6870665,6871404..6871488,6872790..6873806,6874518..6874667,6878502..6878555))
location: region:6861627-6878555:-1
so has part: feature:6878502-6878555:-1:exon
so has part: feature:6874518-6874667:-1:exon
so has part: feature:6872790-6873806:-1:exon
so has part: feature:6871404-6871488:-1:exon
so has part: feature:6870547-6870665:-1:exon
so has part: feature:6869589-6869709:-1:exon
so has part: feature:6867146-6867282:-1:exon
so has part: feature:6866226-6866374:-1:exon
so has part: feature:6865397-6865545:-1:exon
so has part: feature:6861627-6861655:-1:exon

XP_012629511.1
type: Protein
SIO_000068: ncbiprotein

position:6861627:-1
position: 6861627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6878555:-1
position: 6878555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6878502-6878555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6874518-6874667:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6872790-6873806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6871404-6871488:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6870547-6870665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6869589-6869709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6867146-6867282:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6866226-6866374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6865397-6865545:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6861627-6861655:-1:exon

DSPP
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: DSPP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6953762..6959417
location: region:6953762-6959417:1
so has part: feature:6953762-6959417:1:exon
subclass of: SO_0000010

105876392
type: Gene
SIO_000068: ncbigene

position:6953762:1
position: 6953762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6959417:1
position: 6959417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6953762-6959417:1:exon

DSPP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: DSPP
product: dentin sialophosphoprotein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012774072.1
SIO_010081: DSPP
subclass of: SO_0000673
so part of: DSPP
location: join(6953762..6953812,6955571..6955657,6955943..6956911,6957375..6959417)
location: region:6953762-6959417:1
so has part: feature:6953762-6953812:1:exon
so has part: feature:6955571-6955657:1:exon
so has part: feature:6955943-6956911:1:exon
so has part: feature:6957375-6959417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6953762-6953812:1:exon

position:6953812:1
position: 6953812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6955571-6955657:1:exon

position:6955571:1
position: 6955571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6955657:1
position: 6955657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6955943-6956911:1:exon

position:6955943:1
position: 6955943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6956911:1
position: 6956911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6957375-6959417:1:exon

position:6957375:1
position: 6957375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DSPP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: DSPP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dentin sialophosphoprotein
translation: MKIIIYFCIWAVAWAIPVPHIKPLERHAAEKSVNLSLLAKSKVPVQDALNANGTSKESGFPTHESERGRQWYAQDGYKGEGNGSQWAEVGGKSSSTYHTLANGEGETEDWNGGAGKPGTYGHDGIHEKEDDTTASGILNNARATNGSNTHGNADTDTNGGVGTTSPGEDATVVQEDGTQAAGSNHRRDQEEEINNHPCGNGNDMGGITPPNEGERDGDKEAGVVTPGNGEDVGLDNSHGSPSGNGTDEDEDEGSGDDEGEDGGDGKEGSDNSKGQEGQDHDEEDDSDNSIGQNSISREDGDLGDREDPHNDNDRENTSKSEEDSHGVPEDSGSQRKEDTQKLSHQESKGAENGITKEPEPNAVGKSQDKGTEIKGPHGGDGNATKEAGEDKDRKGRRGTGEGKGSVQTQGEVDKVQGPGPRPEPGDRAGRSKTGSDSNSDGYDSYDFDDGPMQRDGPDSSDESNGSEGANSGSDSDSGGRGGASYDSDESRDDGDGSDSKEGGDDGDSTSDSNDSDSNGNGGSDDSDKSDSSKGKSENSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSTDSSDSSDSSDSSDSSDSNDSSDSSDSSDSSDSSDSSDSDSKSDSSDSSDNDSKSDSSNSSDSKSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDNSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSSESSDERDSQSKSGNGNDNGSDSDSDSDSEGSDSNHSTSDD
SIO_010081: DSPP
subclass of: SO_0000673
so part of: DSPP
location: join(6953762..6953812,6955571..6955657,6955943..6956911,6957375..6959417)
location: region:6953762-6959417:1
so has part: feature:6953762-6953812:1:exon
so has part: feature:6955571-6955657:1:exon
so has part: feature:6955943-6956911:1:exon
so has part: feature:6957375-6959417:1:exon

XP_012629526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6953762-6953812:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6955571-6955657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6955943-6956911:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6957375-6959417:1:exon

DMP1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: DMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6974481..6987679
location: region:6974481-6987679:1
so has part: feature:6974481-6987679:1:exon
subclass of: SO_0000010

105876377
type: Gene
SIO_000068: ncbigene

position:6974481:1
position: 6974481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6987679:1
position: 6987679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6974481-6987679:1:exon

DMP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: DMP1
product: dentin matrix acidic phosphoprotein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284563.1
SIO_010081: DMP1
subclass of: SO_0000673
so part of: DMP1
location: join(6974481..6974558,6980878..6980952,6981364..6981411,6983145..6983177,6983790..6983837,6986528..6987679)
location: region:6974481-6987679:1
so has part: feature:6974481-6974558:1:exon
so has part: feature:6980878-6980952:1:exon
so has part: feature:6981364-6981411:1:exon
so has part: feature:6983145-6983177:1:exon
so has part: feature:6983790-6983837:1:exon
so has part: feature:6986528-6987679:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6974481-6974558:1:exon

position:6974558:1
position: 6974558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6980878-6980952:1:exon

position:6980878:1
position: 6980878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6980952:1
position: 6980952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6981364-6981411:1:exon

position:6981364:1
position: 6981364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6981411:1
position: 6981411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6983145-6983177:1:exon

position:6983145:1
position: 6983145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6983177:1
position: 6983177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6983790-6983837:1:exon

position:6983790:1
position: 6983790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6983837:1
position: 6983837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6986528-6987679:1:exon

position:6986528:1
position: 6986528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DMP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: DMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dentin matrix acidic phosphoprotein 1
translation: MRPSVLLMFLWGLACAFPVARYQNDDSEHSKEWKGHLAQASTPALESSESSEGSPISSEEQADADPGDSPESQEGPDARHHVQGPAGGPSRGAGGRGGAEKDEDNDEDDSGDDTLGDDGRGPGPEEGQDGGHSRRGGDEDSAADTTSEGDESARDATSNSSDSEEPWLGGGSHGEGSESEDTGMQSDDPQGSRSDRGGSRANSPGVTSTGSRRHGERPRKSHLSEEEDDTGEPDGGHTVEVAQSDSTENRDSKEVARSREAREDSQSQEAREDSQSREDSHHTPEPSSESSPEADDSSSSSESQEEAATESRGDNPDDTESHAEDRGDSDSSESSEEGGATVPSSSESESSESLASASSSSSSSSSESPESPPGDEDSSSRDSDSRDSSSPSGEDGDSTAESRSSSEEDGRPRTVEIESRKLTVDAYHNKPIGDQDDNNCQDGY
SIO_010081: DMP1
subclass of: SO_0000673
so part of: DMP1
location: join(6980899..6980952,6981364..6981411,6983145..6983177,6983790..6983837,6986528..6987679)
location: region:6980899-6987679:1
so has part: feature:6980899-6980952:1:exon
so has part: feature:6981364-6981411:1:exon
so has part: feature:6983145-6983177:1:exon
so has part: feature:6983790-6983837:1:exon
so has part: feature:6986528-6987679:1:exon

XP_020140152.1
type: Protein
SIO_000068: ncbiprotein

position:6980899:1
position: 6980899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6980899-6980952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6981364-6981411:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6983145-6983177:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6983790-6983837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6986528-6987679:1:exon

IBSP
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: IBSP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7036610..7054361
location: region:7036610-7054361:1
so has part: feature:7036610-7054361:1:exon
subclass of: SO_0000010

105876390
type: Gene
SIO_000068: ncbigene

position:7036610:1
position: 7036610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7054361:1
position: 7054361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7036610-7054361:1:exon

IBSP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: IBSP
product: integrin binding sialoprotein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012774071.1
SIO_010081: IBSP
subclass of: SO_0000673
so part of: IBSP
location: join(7036610..7036637,7039198..7039265,7039360..7039410,7039506..7039583,7044287..7044352,7048895..7049047,7053722..7054361)
location: region:7036610-7054361:1
so has part: feature:7036610-7036637:1:exon
so has part: feature:7039198-7039265:1:exon
so has part: feature:7039360-7039410:1:exon
so has part: feature:7039506-7039583:1:exon
so has part: feature:7044287-7044352:1:exon
so has part: feature:7048895-7049047:1:exon
so has part: feature:7053722-7054361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7036610-7036637:1:exon

position:7036637:1
position: 7036637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7039198-7039265:1:exon

position:7039198:1
position: 7039198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7039265:1
position: 7039265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7039360-7039410:1:exon

position:7039360:1
position: 7039360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7039410:1
position: 7039410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7039506-7039583:1:exon

position:7039506:1
position: 7039506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7039583:1
position: 7039583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7044287-7044352:1:exon

position:7044287:1
position: 7044287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7044352:1
position: 7044352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7048895-7049047:1:exon

position:7048895:1
position: 7048895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7049047:1
position: 7049047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7053722-7054361:1:exon

position:7053722:1
position: 7053722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IBSP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: IBSP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bone sialoprotein 2
translation: MKTALILLSILGMACAFSMKNLHRRVKLEDSEENGVFKYRPRYYLYKHAYFYPALKQFPVQGSSDSSEENEDGDSSEEEEEEEEASNEEGNNENSDENEEEESEADNTTLSAVTPDYGDVTPGTGFAAIQLLKKAGAVRSKATKQEESDEEEEEEEEEEEEGKEEDEAEVDENEQGVNGTSSNSTETENGDSGDGGEGSVTGAATSPSWGLRATTTTPPPEVYATTSPPPEVYATTSPPPGRATSPAYGGDYEQTATSEFDDGYEVYDSENGDPRGDTYRAYEDEYGYYKGRGYDGYEGQDYYYHQ
SIO_010081: IBSP
subclass of: SO_0000673
so part of: IBSP
location: join(7039212..7039265,7039360..7039410,7039506..7039583,7044287..7044352,7048895..7049047,7053722..7054240)
location: region:7039212-7054240:1
so has part: feature:7039212-7039265:1:exon
so has part: feature:7039360-7039410:1:exon
so has part: feature:7039506-7039583:1:exon
so has part: feature:7044287-7044352:1:exon
so has part: feature:7048895-7049047:1:exon
so has part: feature:7053722-7054240:1:exon

XP_012629525.1
type: Protein
SIO_000068: ncbiprotein

position:7039212:1
position: 7039212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7054240:1
position: 7054240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7039212-7039265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7039360-7039410:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7039506-7039583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7044287-7044352:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7048895-7049047:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7053722-7054240:1:exon

LOC105876391
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105876391
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7047631..7054237)
location: region:7047631-7054237:-1
so has part: feature:7047631-7054237:-1:exon
subclass of: SO_0000011

105876391
type: Gene
SIO_000068: ncbigene

position:7047631:-1
position: 7047631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7054237:-1
position: 7054237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7047631-7054237:-1:exon

LOC105876391
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105876391
product: uncharacterized LOC105876391
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001156444.1
SIO_010081: LOC105876391
subclass of: SO_0000673
so part of: LOC105876391
location: complement(join(7047631..7047731,7048884..7049186,7054157..7054237))
location: region:7047631-7054237:-1
so has part: feature:7054157-7054237:-1:exon
so has part: feature:7048884-7049186:-1:exon
so has part: feature:7047631-7047731:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7054157-7054237:-1:exon

position:7054157:-1
position: 7054157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7048884-7049186:-1:exon

position:7048884:-1
position: 7048884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7049186:-1
position: 7049186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7047631-7047731:-1:exon

position:7047731:-1
position: 7047731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MEPE
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: MEPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7060441..7087425
location: region:7060441-7087425:1
so has part: feature:7060441-7087425:1:exon
subclass of: SO_0000010

105876388
type: Gene
SIO_000068: ncbigene

position:7060441:1
position: 7060441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7087425:1
position: 7087425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7060441-7087425:1:exon

MEPE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: MEPE
product: matrix extracellular phosphoglycoprotein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012774070.1
SIO_010081: MEPE
subclass of: SO_0000673
so part of: MEPE
location: join(7060441..7060659,7062344..7062392,7065364..7065429,7067422..7067487,7070422..7070475,7071511..7071606,7076273..7077521,7082764..7082767,7087140..7087425)
location: region:7060441-7087425:1
so has part: feature:7060441-7060659:1:exon
so has part: feature:7062344-7062392:1:exon
so has part: feature:7065364-7065429:1:exon
so has part: feature:7067422-7067487:1:exon
so has part: feature:7070422-7070475:1:exon
so has part: feature:7071511-7071606:1:exon
so has part: feature:7076273-7077521:1:exon
so has part: feature:7082764-7082767:1:exon
so has part: feature:7087140-7087425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7060441-7060659:1:exon

position:7060659:1
position: 7060659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7062344-7062392:1:exon

position:7062344:1
position: 7062344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7062392:1
position: 7062392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7065364-7065429:1:exon

position:7065364:1
position: 7065364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7065429:1
position: 7065429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7067422-7067487:1:exon

position:7067422:1
position: 7067422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7067487:1
position: 7067487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7070422-7070475:1:exon

position:7070422:1
position: 7070422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7070475:1
position: 7070475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7071511-7071606:1:exon

position:7071511:1
position: 7071511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7071606:1
position: 7071606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7076273-7077521:1:exon

position:7076273:1
position: 7076273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7077521:1
position: 7077521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7082764-7082767:1:exon

position:7082764:1
position: 7082764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7082767:1
position: 7082767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7087140-7087425:1:exon

position:7087140:1
position: 7087140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEPE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: MEPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrix extracellular phosphoglycoprotein
translation: MEKCPEIANPAKEARHSEGARYQKFSKMQVVCVGLLFFTVAWAAPTFQPQTEKTKQGCVEEQRITYKGHHEKHGYYTFKYVYTSPGKKNETGITKEEKNKDNIVLRHLDGRRHQEPSPKENVVQEREKNVSLSEASENNQRSGESPNLLANGQTLSEDYSTGNKENVHDDLKMSIHPESPGNKGTEEGDETISKLHDQEEYSSALIRKNLQHKMGPVSVIKLLGEENKKNTPRNVLNKIPAGVNYAKARSKDKKTPLRDPQARKSPIKAKSSPYTQESTHYLKHLSKVKKIPSDFEGSGYADLQERGDNDISSFSGDGQPFEDIPGKGGALGPHPEGVPGPGEAEAVTHDTRGPGYNEIPEREGNGDYTVGTRDDTAKERDAVDISLVEGRNDIMGSTNFQELPGKEGNRVDAGSQNAHQGKVEFHYPHAPSKDKRKEGSSDSTRSTNYNEIPKNGKGSTREGKERSDRNQGTVREKQRYSSKGESQGPLVPSRGLDDEAQNEIGPHHGPNNEGLTTHSRKYHGVPHGQNDSARNNGMPQRRGPGGHRRPHFYGRFSSPRKDDSSESSSDSGSSSESDGD
SIO_010081: MEPE
subclass of: SO_0000673
so part of: MEPE
location: join(7062390..7062392,7065364..7065429,7067422..7067487,7070422..7070475,7071511..7071606,7076273..7077521,7082764..7082767,7087140..7087344)
location: region:7062390-7087344:1
so has part: feature:7062390-7062392:1:exon
so has part: feature:7065364-7065429:1:exon
so has part: feature:7067422-7067487:1:exon
so has part: feature:7070422-7070475:1:exon
so has part: feature:7071511-7071606:1:exon
so has part: feature:7076273-7077521:1:exon
so has part: feature:7082764-7082767:1:exon
so has part: feature:7087140-7087344:1:exon

XP_012629524.1
type: Protein
SIO_000068: ncbiprotein

position:7062390:1
position: 7062390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7087344:1
position: 7087344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7062390-7062392:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7065364-7065429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7067422-7067487:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7070422-7070475:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7071511-7071606:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7076273-7077521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7082764-7082767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7087140-7087344:1:exon

LOC109730146
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7085657..7085967
location: region:7085657-7085967:1
so has part: feature:7085657-7085967:1:exon

109730146
type: Gene
SIO_000068: ncbigene

position:7085657:1
position: 7085657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7085967:1
position: 7085967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7085657-7085967:1:exon

LOC109730146
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC109730146
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC109730146
subclass of: SO_0000673
so part of: LOC109730146
location: 7085657..7085967
location: region:7085657-7085967:1
so has part: feature:7085657-7085967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7085657-7085967:1:exon

SPP1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: SPP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7172905..7184302
location: region:7172905-7184302:1
so has part: feature:7172905-7184302:1:exon
subclass of: SO_0000010

105876363
type: Gene
SIO_000068: ncbigene

position:7172905:1
position: 7172905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7184302:1
position: 7184302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7172905-7184302:1:exon

SPP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SPP1
product: secreted phosphoprotein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_020284564.1
SIO_010081: SPP1
subclass of: SO_0000673
so part of: SPP1
location: join(7172905..7173063,7174487..7174554,7174669..7174707,7177664..7177744,7179412..7179453,7181078..7181374,7183490..7184302)
location: region:7172905-7184302:1
so has part: feature:7172905-7173063:1:exon
so has part: feature:7174487-7174554:1:exon
so has part: feature:7174669-7174707:1:exon
so has part: feature:7177664-7177744:1:exon
so has part: feature:7179412-7179453:1:exon
so has part: feature:7181078-7181374:1:exon
so has part: feature:7183490-7184302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7172905-7173063:1:exon

position:7173063:1
position: 7173063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7174487-7174554:1:exon

position:7174487:1
position: 7174487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7174554:1
position: 7174554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7174669-7174707:1:exon

position:7174669:1
position: 7174669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7174707:1
position: 7174707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7177664-7177744:1:exon

position:7177664:1
position: 7177664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7177744:1
position: 7177744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7179412-7179453:1:exon

position:7179412:1
position: 7179412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7179453:1
position: 7179453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7181078-7181374:1:exon

position:7181078:1
position: 7181078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7181374:1
position: 7181374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7183490-7184302:1:exon

position:7183490:1
position: 7183490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SPP1
product: secreted phosphoprotein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_020284565.1
SIO_010081: SPP1
subclass of: SO_0000673
so part of: SPP1
location: join(7172905..7173063,7174487..7174554,7174669..7174707,7177664..7177744,7179412..7179453,7181078..7181374,7183601..7184302)
location: region:7172905-7184302:1
so has part: feature:7172905-7173063:1:exon
so has part: feature:7174487-7174554:1:exon
so has part: feature:7174669-7174707:1:exon
so has part: feature:7177664-7177744:1:exon
so has part: feature:7179412-7179453:1:exon
so has part: feature:7181078-7181374:1:exon
so has part: feature:7183601-7184302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7172905-7173063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7174487-7174554:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7174669-7174707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7177664-7177744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7179412-7179453:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7181078-7181374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7183601-7184302:1:exon

position:7183601:1
position: 7183601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SPP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: osteopontin isoform X1
translation: MGIAMICFCLFGIAYALPVKPANSGSSEEKQLHNKYPDAVATWLKPDPSQKKNLLAPQNAVSSEETVKFKQQSSFLSKSNEGHDHMEDEGDDDDANHVDSHESVDSDDSDEADSHHSDESEEVATQVPPDTPATSVLTPPVPTVDTHHGRGDSVVRGLKSKSKKFPSHDIQFPDSVEEDLASHMESEDLDGPHRAVPIAQRLNVLFAQENLGKDSRETSQMDDPSVEAHSHEQSRLRKRKADASSNEHSDVIDSQGHSHSHEFLSQEDRLVPDPQE
SIO_010081: SPP1
subclass of: SO_0000673
so part of: SPP1
location: join(7174501..7174554,7174669..7174707,7177664..7177744,7179412..7179453,7181078..7181374,7183490..7183807)
location: region:7174501-7183807:1
so has part: feature:7174501-7174554:1:exon
so has part: feature:7174669-7174707:1:exon
so has part: feature:7177664-7177744:1:exon
so has part: feature:7179412-7179453:1:exon
so has part: feature:7181078-7181374:1:exon
so has part: feature:7183490-7183807:1:exon

XP_020140153.1
type: Protein
SIO_000068: ncbiprotein

position:7174501:1
position: 7174501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7183807:1
position: 7183807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7174501-7174554:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7174669-7174707:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7177664-7177744:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7179412-7179453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7181078-7181374:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7183490-7183807:1:exon

SPP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SPP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: osteopontin isoform X2
translation: MGIAMICFCLFGIAYALPVKPANSGSSEEKQLHNKYPDAVATWLKPDPSQKKNLLAPQNAVSSEETVKFKQQSSFLSKSNEGHDHMEDEGDDDDANHVDSHESVDSDDSDEADSHHSDESEEVATQVPPDTPATSVLTPPVPTVDTHHGRGDSVVRGLKSKSKKFPSHDIQENLGKDSRETSQMDDPSVEAHSHEQSRLRKRKADASSNEHSDVIDSQGHSHSHEFLSQEDRLVPDPQE
SIO_010081: SPP1
subclass of: SO_0000673
so part of: SPP1
location: join(7174501..7174554,7174669..7174707,7177664..7177744,7179412..7179453,7181078..7181374,7183601..7183807)
location: region:7174501-7183807:1
so has part: feature:7174501-7174554:1:exon
so has part: feature:7174669-7174707:1:exon
so has part: feature:7177664-7177744:1:exon
so has part: feature:7179412-7179453:1:exon
so has part: feature:7181078-7181374:1:exon
so has part: feature:7183601-7183807:1:exon

XP_020140154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7174501-7174554:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7174669-7174707:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7177664-7177744:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7179412-7179453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7181078-7181374:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7183601-7183807:1:exon

PKD2
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: PKD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7188267..7248165
location: region:7188267-7248165:1
so has part: feature:7188267-7248165:1:exon
subclass of: SO_0000010

105876376
type: Gene
SIO_000068: ncbigene

position:7188267:1
position: 7188267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7248165:1
position: 7248165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7188267-7248165:1:exon

PKD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PKD2
product: polycystin 2, transient receptor potential cation channel
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 13 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284541.1
SIO_010081: PKD2
subclass of: SO_0000673
so part of: PKD2
location: join(7188267..7188323,7191443..7192856,7210979..7211225,7213103..7213327,7226028..7226256,7227938..7228110,7228303..7228348,7233537..7233739,7237751..7237849,7240040..7240161,7242551..7242668,7244483..7244646,7246201..7246348,7247368..7248165)
location: region:7188267-7248165:1
so has part: feature:7188267-7188323:1:exon
so has part: feature:7191443-7192856:1:exon
so has part: feature:7210979-7211225:1:exon
so has part: feature:7213103-7213327:1:exon
so has part: feature:7226028-7226256:1:exon
so has part: feature:7227938-7228110:1:exon
so has part: feature:7228303-7228348:1:exon
so has part: feature:7233537-7233739:1:exon
so has part: feature:7237751-7237849:1:exon
so has part: feature:7240040-7240161:1:exon
so has part: feature:7242551-7242668:1:exon
so has part: feature:7244483-7244646:1:exon
so has part: feature:7246201-7246348:1:exon
so has part: feature:7247368-7248165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7188267-7188323:1:exon

position:7188323:1
position: 7188323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7191443-7192856:1:exon

position:7191443:1
position: 7191443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7192856:1
position: 7192856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7210979-7211225:1:exon

position:7210979:1
position: 7210979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7211225:1
position: 7211225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7213103-7213327:1:exon

position:7213103:1
position: 7213103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7213327:1
position: 7213327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7226028-7226256:1:exon

position:7226028:1
position: 7226028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7226256:1
position: 7226256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7227938-7228110:1:exon

position:7227938:1
position: 7227938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7228110:1
position: 7228110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7228303-7228348:1:exon

position:7228303:1
position: 7228303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7228348:1
position: 7228348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7233537-7233739:1:exon

position:7233537:1
position: 7233537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7233739:1
position: 7233739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7237751-7237849:1:exon

position:7237751:1
position: 7237751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7237849:1
position: 7237849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7240040-7240161:1:exon

position:7240040:1
position: 7240040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7240161:1
position: 7240161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7242551-7242668:1:exon

position:7242551:1
position: 7242551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7242668:1
position: 7242668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7244483-7244646:1:exon

position:7244483:1
position: 7244483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7244646:1
position: 7244646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7246201-7246348:1:exon

position:7246201:1
position: 7246201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7246348:1
position: 7246348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7247368-7248165:1:exon

position:7247368:1
position: 7247368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PKD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PKD2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: polycystin-2
translation: MAPADSGSITIRLQLGGTKMARVXRAAARDPAGASASPSPAPSACSRQAWSRDNPGFEAEEDEDEEEEGEEGGMVVEMDVEWRPGGRRPASASAAAAGAAAAGPLGAPRARSAGPPASAAGGGGDPLRRHLPRDGPPPRVAWAERLVRGLRGKSAPPAGAIARSVSPARASPASATPASASPVCATPASASPVCATPASAPPANAPPANAPPASESPYARPLHARPLYARPLQASPLQARPLYARPLGARPLYACPLQASRLYARPLQVSPLHTRLLQARPLYVLPLQARPLYARSLQVSRLMCDPCKRVPCTRVPCKLVSCKRVPCTRAPCTRIPCKRDPCKRDPCKRVPCMRDPCERDPCERDPCERDPCERDPCTRIPCERVPCMRDPCERDPCTRDPCERDPCEHAPCERDPCKRAPYKPVPYTRVPGKRTPCKRVPGKRDPCKRVPGKRAPCTPIPCKRVPTSASPLHFQCLVRNATAPLSLQTRWFTEGALLDGLYWNMRPXNQTEADNAVSSSTRTFAGVPRVRQLKVRNGSCSVPQDLRDEIKECYDVLCGQQRRQAPFGPRNGTAWIYTSEKDLNGSSHWGIVATYSGAGYYLDLSRTREETAAQLASLRRNVWLDRGTRATFIDFSVYNANVNLFCVVRLLAEFPATGGVIPSWQIQPMKLMRYVTTFDFFLAACEVIFCFFILYYMVEEILEIRIHKLRYFKSFWNCLDVVIIVLSVLAIGINIYRSSSVEMLVQFLDDRNTFPTFEHLAYLQIEFFNNMAAVTTFFCLDKSEPIVSILPQDVYTLKMLPELLDILCFYIVCFVCFVLFCFVFIASLNSVSFWAISTLQRLRKLIEFWDQLFHLTLCSYVFILLNMFLAIINDTYSEVKSDLAQQKAEMEISDLVKKGYHKALVKLKLKKDSVDDISESLKQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEKEREDLDLDHGSLPRPMSSRSFPRSFDDSEEDDDEDSGHSSRRRGSVSSGVSYEEFQVLVRRVDRMEHSIGSVVSKIDAVIVKLEVMEQAKLKRREVLGRLLEGVAEDERLGRDSDIHRDQMERLVRGELECWESDDAASQTSQGLGVPEGPNGPPPPRSSRPPSSQSTEGLEGGRQPGNPNMHV
SIO_010081: PKD2
subclass of: SO_0000673
so part of: PKD2
location: join(7188267..7188323,7191443..7192856,7210979..7211225,7213103..7213327,7226028..7226256,7227938..7228110,7228303..7228348,7233537..7233739,7237751..7237849,7240040..7240161,7242551..7242668,7244483..7244646,7246201..7246348,7247368..7247604)
location: region:7188267-7247604:1
so has part: feature:7188267-7188323:1:exon
so has part: feature:7191443-7192856:1:exon
so has part: feature:7210979-7211225:1:exon
so has part: feature:7213103-7213327:1:exon
so has part: feature:7226028-7226256:1:exon
so has part: feature:7227938-7228110:1:exon
so has part: feature:7228303-7228348:1:exon
so has part: feature:7233537-7233739:1:exon
so has part: feature:7237751-7237849:1:exon
so has part: feature:7240040-7240161:1:exon
so has part: feature:7242551-7242668:1:exon
so has part: feature:7244483-7244646:1:exon
so has part: feature:7246201-7246348:1:exon
so has part: feature:7247368-7247604:1:exon

XP_020140130.1
type: Protein
SIO_000068: ncbiprotein

position:7247604:1
position: 7247604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7188267-7188323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7191443-7192856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7210979-7211225:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7213103-7213327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7226028-7226256:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7227938-7228110:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7228303-7228348:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7233537-7233739:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7237751-7237849:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7240040-7240161:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7242551-7242668:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7244483-7244646:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7246201-7246348:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7247368-7247604:1:exon

ABCG2
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: ABCG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7265193..7321227)
location: region:7265193-7321227:-1
so has part: feature:7265193-7321227:-1:exon
subclass of: SO_0000010

105876362
type: Gene
SIO_000068: ncbigene

position:7265193:-1
position: 7265193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7321227:-1
position: 7321227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7265193-7321227:-1:exon

ABCG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ABCG2
product: ATP binding cassette subfamily G member 2 (Junior blood group)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70 mRNAs, 67 ESTs, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284568.1
SIO_010081: ABCG2
subclass of: SO_0000673
so part of: ABCG2
location: complement(join(7265193..7265622,7269899..7269981,7270769..7270858,7271957..7272111,7278996..7279120,7281742..7281834,7291632..7291714,7298449..7298699,7299910..7300014,7301667..7301818,7306139..7306296,7307090..7307242,7308096..7308210,7309176..7309235,7317286..7317507,7320771..7321227))
location: region:7265193-7321227:-1
so has part: feature:7320771-7321227:-1:exon
so has part: feature:7317286-7317507:-1:exon
so has part: feature:7309176-7309235:-1:exon
so has part: feature:7308096-7308210:-1:exon
so has part: feature:7307090-7307242:-1:exon
so has part: feature:7306139-7306296:-1:exon
so has part: feature:7301667-7301818:-1:exon
so has part: feature:7299910-7300014:-1:exon
so has part: feature:7298449-7298699:-1:exon
so has part: feature:7291632-7291714:-1:exon
so has part: feature:7281742-7281834:-1:exon
so has part: feature:7278996-7279120:-1:exon
so has part: feature:7271957-7272111:-1:exon
so has part: feature:7270769-7270858:-1:exon
so has part: feature:7269899-7269981:-1:exon
so has part: feature:7265193-7265622:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7320771-7321227:-1:exon

position:7320771:-1
position: 7320771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7317286-7317507:-1:exon

position:7317286:-1
position: 7317286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7317507:-1
position: 7317507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7309176-7309235:-1:exon

position:7309176:-1
position: 7309176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7309235:-1
position: 7309235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7308096-7308210:-1:exon

position:7308096:-1
position: 7308096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7308210:-1
position: 7308210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7307090-7307242:-1:exon

position:7307090:-1
position: 7307090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7307242:-1
position: 7307242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7306139-7306296:-1:exon

position:7306139:-1
position: 7306139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7306296:-1
position: 7306296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7301667-7301818:-1:exon

position:7301667:-1
position: 7301667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7301818:-1
position: 7301818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7299910-7300014:-1:exon

position:7299910:-1
position: 7299910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7300014:-1
position: 7300014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7298449-7298699:-1:exon

position:7298449:-1
position: 7298449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7298699:-1
position: 7298699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7291632-7291714:-1:exon

position:7291632:-1
position: 7291632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7291714:-1
position: 7291714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7281742-7281834:-1:exon

position:7281742:-1
position: 7281742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7281834:-1
position: 7281834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7278996-7279120:-1:exon

position:7278996:-1
position: 7278996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7279120:-1
position: 7279120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7271957-7272111:-1:exon

position:7271957:-1
position: 7271957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7272111:-1
position: 7272111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7270769-7270858:-1:exon

position:7270769:-1
position: 7270769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7270858:-1
position: 7270858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7269899-7269981:-1:exon

position:7269899:-1
position: 7269899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7269981:-1
position: 7269981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7265193-7265622:-1:exon

position:7265622:-1
position: 7265622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABCG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ABCG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family G member 2
translation: MSSNNVEVFIPMSQNNTNGVPGTTSSDLKTCSEGAVLSFHDISYRVKVKSGLLRGRKTVEKEILSNINGIMKPGLNAILGPTGGGKSSLLDVLAARKDPHGLYGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINKVIHELGLNKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDTLTLLAAGRLMFHGPAQQALEYFASAGYQCEPYNNPADFFLDVINGDSTAVTLNREENNHEATETIEPSKRDTPIIEKLAEFYVNSSFCGETKAELDQLAMTQKKKKSTVFKDITYATSFCHQLRWISRRSFKNLLGNPQASIAQIIVTIILGLVIGAIYFGLKNDTSGIQNRAGVLFFLTTNQCFSSVSAVSLFRGRRKSLCEHEYISGYYRVSSYFFGKLLSDLLPMRMLPSIIFTSITYFMLGLRPDASAFFIMMFTLMMVAYSASSMALAIAAGQSVVSIATLLMTISFVFMMIFSGLLVNLTTIASWLSWLQYFSIPRYGFTALQHNEFLGLNFCPGLNTTLNDTCSFATCTGEEYLSSQGIDLSPWGLWKNHVALACMIVIFLTIAYLKLLFLKKYS
SIO_010081: ABCG2
subclass of: SO_0000673
so part of: ABCG2
location: complement(join(7265475..7265622,7269899..7269981,7270769..7270858,7271957..7272111,7278996..7279120,7281742..7281834,7291632..7291714,7298449..7298699,7299910..7300014,7301667..7301818,7306139..7306296,7307090..7307242,7308096..7308210,7309176..7309235,7317286..7317488))
location: region:7265475-7317488:-1
so has part: feature:7317286-7317488:-1:exon
so has part: feature:7309176-7309235:-1:exon
so has part: feature:7308096-7308210:-1:exon
so has part: feature:7307090-7307242:-1:exon
so has part: feature:7306139-7306296:-1:exon
so has part: feature:7301667-7301818:-1:exon
so has part: feature:7299910-7300014:-1:exon
so has part: feature:7298449-7298699:-1:exon
so has part: feature:7291632-7291714:-1:exon
so has part: feature:7281742-7281834:-1:exon
so has part: feature:7278996-7279120:-1:exon
so has part: feature:7271957-7272111:-1:exon
so has part: feature:7270769-7270858:-1:exon
so has part: feature:7269899-7269981:-1:exon
so has part: feature:7265475-7265622:-1:exon

XP_020140157.1
type: Protein
SIO_000068: ncbiprotein

position:7265475:-1
position: 7265475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7317488:-1
position: 7317488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7317286-7317488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7309176-7309235:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7308096-7308210:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7307090-7307242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7306139-7306296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7301667-7301818:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7299910-7300014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7298449-7298699:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7291632-7291714:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7281742-7281834:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7278996-7279120:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7271957-7272111:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7270769-7270858:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7269899-7269981:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7265475-7265622:-1:exon

PPM1K
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: PPM1K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7373864..7396388)
location: region:7373864-7396388:-1
so has part: feature:7373864-7396388:-1:exon
subclass of: SO_0000010

105876375
type: Gene
SIO_000068: ncbigene

position:7373864:-1
position: 7373864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7396388:-1
position: 7396388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7373864-7396388:-1:exon

PPM1K
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: PPM1K
product: protein phosphatase, Mg2+/Mn2+ dependent 1K
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 9 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284542.1
SIO_010081: PPM1K
subclass of: SO_0000673
so part of: PPM1K
location: complement(join(7373864..7374092,7378038..7378172,7380828..7380972,7381447..7381612,7393734..7393834,7395917..7396130,7396295..7396388))
location: region:7373864-7396388:-1
so has part: feature:7396295-7396388:-1:exon
so has part: feature:7395917-7396130:-1:exon
so has part: feature:7393734-7393834:-1:exon
so has part: feature:7381447-7381612:-1:exon
so has part: feature:7380828-7380972:-1:exon
so has part: feature:7378038-7378172:-1:exon
so has part: feature:7373864-7374092:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7396295-7396388:-1:exon

position:7396295:-1
position: 7396295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7395917-7396130:-1:exon

position:7395917:-1
position: 7395917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7396130:-1
position: 7396130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7393734-7393834:-1:exon

position:7393734:-1
position: 7393734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7393834:-1
position: 7393834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7381447-7381612:-1:exon

position:7381447:-1
position: 7381447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7381612:-1
position: 7381612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7380828-7380972:-1:exon

position:7380828:-1
position: 7380828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7380972:-1
position: 7380972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7378038-7378172:-1:exon

position:7378038:-1
position: 7378038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7378172:-1
position: 7378172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7373864-7374092:-1:exon

position:7374092:-1
position: 7374092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPM1K
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: PPM1K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1K, mitochondrial
translation: MHALSMCALQIVGAAAGPAVAVVHGEGRHASQGLPSIKYGRPIPALSLQRVGRASLIGRRRENEDRCGVARLTDDVLCFAVYDGHGGPAAADFCHAHMERCILDLLPKEKDLETVLTLAFLEIDKAFSSHAHLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTTDHTPERKDEKERIKKCGGFIAWNSLGQPHVNGRLAMTRSIGDLDLKSSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDAVNQCHDPSEAAHVVTEQAIQYGTEDNSTAVVVPFGAWGKYKNSEINFSFSRSFASSGRWD
SIO_010081: PPM1K
subclass of: SO_0000673
so part of: PPM1K
location: complement(join(7373961..7374092,7378038..7378172,7380828..7380972,7381447..7381612,7393734..7393834,7395917..7396130,7396295..7396388))
location: region:7373961-7396388:-1
so has part: feature:7396295-7396388:-1:exon
so has part: feature:7395917-7396130:-1:exon
so has part: feature:7393734-7393834:-1:exon
so has part: feature:7381447-7381612:-1:exon
so has part: feature:7380828-7380972:-1:exon
so has part: feature:7378038-7378172:-1:exon
so has part: feature:7373961-7374092:-1:exon

XP_020140131.1
type: Protein
SIO_000068: ncbiprotein

position:7373961:-1
position: 7373961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7396295-7396388:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7395917-7396130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7393734-7393834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7381447-7381612:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7380828-7380972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7378038-7378172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7373961-7374092:-1:exon

LOC109730134
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7446689..7454538
location: region:7446689-7454538:1
so has part: feature:7446689-7454538:1:exon
subclass of: SO_0000010

109730134
type: Gene
SIO_000068: ncbigene