Microcebus murinus isolate mixed chromosome 26, Mmur_3.0, whole genome shotgun sequence.
type: Entry
definition: Microcebus murinus isolate mixed chromosome 26, Mmur_3.0, whole genome shotgun sequence.
sequence version: NC_033685.1
sequence date: 2017-02-27
sequence: sequence
division: CON
label: NC_033685.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA285159
dblink: SAMN06275470
keyword: WGS
keyword: RefSeq
source: Microcebus murinus (gray mouse lemur)
organism: Microcebus murinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM007686.1.\nAssembly name: Mmur_3.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2017/02/06. The original whole-genome shotgun project has the\naccession ABDC00000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Date :: MAY-2015\nAssembly Method :: AllPathsLG v. 41070; Atlas Link v. 1.0;\n Atlas GapFill v. 2.0; PBJelly2 v. 14.9.9;\n Lachesis v. shendurelab-LACHESIS-2151de9;\n BioNano IrysSolve v. 2.1\nPolishing Method :: Pilon v 1.18\nAssembly Name :: Mmur_3.0\nGenome Coverage :: 221.6x\nSequencing Technology :: Illumina; PacBio RS; PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Microcebus murinus Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 29216678
topology: linear
so has quality: SO_0000987
location: 1..29216678
location: region:1-29216678:1
RO_0002162: 30608

NC_033685
type: RefSeq
SIO_000068: refseq

PRJNA285159
type: BioProject
SIO_000068: bioproject

SAMN06275470
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29216678:1
position: 29216678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-29216678:1:source
so part of: sequence
organism: Microcebus murinus
mol type: genomic DNA
isolate: mixed
chromosome: 26
sex: pooled male and female
tissue type: liver; kidney
note: three separate animals were used in this assembly: #8(Reference animal), 1886F (Citronella), 7006M (Rosehip)

30608
type: Taxonomy
SIO_000068: taxonomy

LOC105857851
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105857851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 42699..489701
location: region:42699-489701:1
so has part: feature:42699-489701:1:exon
subclass of: SO_0000010

105857851
type: Gene
SIO_000068: ncbigene

position:42699:1
position: 42699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489701:1
position: 489701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42699-489701:1:exon

LOC105857851
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105857851
product: contactin-4-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012740562.2
SIO_010081: LOC105857851
subclass of: SO_0000673
so part of: LOC105857851
location: join(42699..42744,219325..219466,403912..404038,412247..412422,488491..489701)
location: region:42699-489701:1
so has part: feature:42699-42744:1:exon
so has part: feature:219325-219466:1:exon
so has part: feature:403912-404038:1:exon
so has part: feature:412247-412422:1:exon
so has part: feature:488491-489701:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42699-42744:1:exon

position:42744:1
position: 42744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:219325-219466:1:exon

position:219325:1
position: 219325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219466:1
position: 219466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:403912-404038:1:exon

position:403912:1
position: 403912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404038:1
position: 404038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:412247-412422:1:exon

position:412247:1
position: 412247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412422:1
position: 412422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:488491-489701:1:exon

position:488491:1
position: 488491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105857851
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105857851
product: contactin-4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012740553.2
SIO_010081: LOC105857851
subclass of: SO_0000673
so part of: LOC105857851
location: join(152422..156769,219325..219466,403912..404038,412247..412422,488491..489701)
location: region:152422-489701:1
so has part: feature:152422-156769:1:exon
so has part: feature:219325-219466:1:exon
so has part: feature:403912-404038:1:exon
so has part: feature:412247-412422:1:exon
so has part: feature:488491-489701:1:exon

position:152422:1
position: 152422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152422-156769:1:exon

position:156769:1
position: 156769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:219325-219466:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:403912-404038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:412247-412422:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488491-489701:1:exon

LOC105857851
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105857851
product: contactin-4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012740548.2
SIO_010081: LOC105857851
subclass of: SO_0000673
so part of: LOC105857851
location: join(152422..156434,219325..219466,403912..404038,412247..412422,488491..489701)
location: region:152422-489701:1
so has part: feature:152422-156434:1:exon
so has part: feature:219325-219466:1:exon
so has part: feature:403912-404038:1:exon
so has part: feature:412247-412422:1:exon
so has part: feature:488491-489701:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:152422-156434:1:exon

position:156434:1
position: 156434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:219325-219466:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:403912-404038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:412247-412422:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488491-489701:1:exon

LOC105857851
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105857851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-4-like
translation: MRLPWELLVLQSFMLCLADDYTLHGPIFIQEPSHIMFPLDSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGNLLINNPNKTQDAGAYQCVATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGGIYKCAHMHSSPTAVFLAPCSP
SIO_010081: LOC105857851
subclass of: SO_0000673
so part of: LOC105857851
location: join(219412..219466,403912..404038,412247..412422,488491..488654)
location: region:219412-488654:1
so has part: feature:219412-219466:1:exon
so has part: feature:403912-404038:1:exon
so has part: feature:412247-412422:1:exon
so has part: feature:488491-488654:1:exon

XP_012596002.1
type: Protein
SIO_000068: ncbiprotein

position:219412:1
position: 219412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488654:1
position: 488654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219412-219466:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403912-404038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412247-412422:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488491-488654:1:exon

LOC105857851
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105857851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-4-like
translation: MRLPWELLVLQSFMLCLADDYTLHGPIFIQEPSHIMFPLDSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGNLLINNPNKTQDAGAYQCVATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGGIYKCAHMHSSPTAVFLAPCSP
SIO_010081: LOC105857851
subclass of: SO_0000673
so part of: LOC105857851
location: join(219412..219466,403912..404038,412247..412422,488491..488654)
location: region:219412-488654:1
so has part: feature:219412-219466:1:exon
so has part: feature:403912-404038:1:exon
so has part: feature:412247-412422:1:exon
so has part: feature:488491-488654:1:exon

XP_012596007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219412-219466:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403912-404038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412247-412422:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488491-488654:1:exon

LOC105857851
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105857851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-4-like
translation: MRLPWELLVLQSFMLCLADDYTLHGPIFIQEPSHIMFPLDSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGNLLINNPNKTQDAGAYQCVATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGGIYKCAHMHSSPTAVFLAPCSP
SIO_010081: LOC105857851
subclass of: SO_0000673
so part of: LOC105857851
location: join(219412..219466,403912..404038,412247..412422,488491..488654)
location: region:219412-488654:1
so has part: feature:219412-219466:1:exon
so has part: feature:403912-404038:1:exon
so has part: feature:412247-412422:1:exon
so has part: feature:488491-488654:1:exon

XP_012596016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219412-219466:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403912-404038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412247-412422:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488491-488654:1:exon

LOC105877241
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105877241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(514948..515493)
location: region:514948-515493:-1
so has part: feature:514948-515493:-1:exon

105877241
type: Gene
SIO_000068: ncbigene

position:514948:-1
position: 514948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515493:-1
position: 515493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514948-515493:-1:exon

LOC105877241
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105877241
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105877241
subclass of: SO_0000673
so part of: LOC105877241
location: complement(514948..515336)
location: region:514948-515336:-1
so has part: feature:514948-515336:-1:exon

position:515336:-1
position: 515336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514948-515336:-1:exon

LOC105877241
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105877241
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105877241
subclass of: SO_0000673
so part of: LOC105877241
location: complement(515469..515493)
location: region:515469-515493:-1
so has part: feature:515469-515493:-1:exon

position:515469:-1
position: 515469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515469-515493:-1:exon

LOC105885180
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105885180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(527834..528717)
location: region:527834-528717:-1
so has part: feature:527834-528717:-1:exon

105885180
type: Gene
SIO_000068: ncbigene

position:527834:-1
position: 527834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528717:-1
position: 528717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527834-528717:-1:exon

LOC105885180
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105885180
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105885180
subclass of: SO_0000673
so part of: LOC105885180
location: complement(527834..528717)
location: region:527834-528717:-1
so has part: feature:527834-528717:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527834-528717:-1:exon

EDEM1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: EDEM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(713395..744091)
location: region:713395-744091:-1
so has part: feature:713395-744091:-1:exon
subclass of: SO_0000010

105869403
type: Gene
SIO_000068: ncbigene

position:713395:-1
position: 713395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744091:-1
position: 744091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:713395-744091:-1:exon

EDEM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: EDEM1
product: ER degradation enhancing alpha-mannosidase like protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012761161.2
SIO_010081: EDEM1
subclass of: SO_0000673
so part of: EDEM1
location: complement(join(713395..713705,715353..715544,721851..721947,722831..722904,725117..725287,726140..726260,727878..728052,730689..730872,731871..732042,733252..733355,737717..737789,743546..744091))
location: region:713395-744091:-1
so has part: feature:743546-744091:-1:exon
so has part: feature:737717-737789:-1:exon
so has part: feature:733252-733355:-1:exon
so has part: feature:731871-732042:-1:exon
so has part: feature:730689-730872:-1:exon
so has part: feature:727878-728052:-1:exon
so has part: feature:726140-726260:-1:exon
so has part: feature:725117-725287:-1:exon
so has part: feature:722831-722904:-1:exon
so has part: feature:721851-721947:-1:exon
so has part: feature:715353-715544:-1:exon
so has part: feature:713395-713705:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743546-744091:-1:exon

position:743546:-1
position: 743546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:737717-737789:-1:exon

position:737717:-1
position: 737717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737789:-1
position: 737789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:733252-733355:-1:exon

position:733252:-1
position: 733252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733355:-1
position: 733355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:731871-732042:-1:exon

position:731871:-1
position: 731871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732042:-1
position: 732042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:730689-730872:-1:exon

position:730689:-1
position: 730689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730872:-1
position: 730872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:727878-728052:-1:exon

position:727878:-1
position: 727878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728052:-1
position: 728052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:726140-726260:-1:exon

position:726140:-1
position: 726140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726260:-1
position: 726260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:725117-725287:-1:exon

position:725117:-1
position: 725117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725287:-1
position: 725287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:722831-722904:-1:exon

position:722831:-1
position: 722831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722904:-1
position: 722904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:721851-721947:-1:exon

position:721851:-1
position: 721851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721947:-1
position: 721947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:715353-715544:-1:exon

position:715353:-1
position: 715353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715544:-1
position: 715544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:713395-713705:-1:exon

position:713705:-1
position: 713705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EDEM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: EDEM1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ER degradation-enhancing alpha-mannosidase-like protein 1
translation: MQWRALVLGLVLLRLGLHGVLWCVFGLGPSVGFYQRFPLSFGFPRLRGPDGAAPPAAPALSARPGPPSGPSWLQPPRAGAAGGRRRAPRRPGPGVCGPAHWGYVLGGRGRGRDEYERRYSRAFPPQLRAQMRDLARGMFAFGYDNYMAHAFPQDELNPIHCRGRGPDRGDPSNLNINDVLGNYSLTLVDALDTLAIMGNSSEFQKAVKLVIDTVSFDKDSTVQVFEATIRVLGSLLSAHRIITDSKQPFGDMTIKDYDNELLHMAHDLAVRLLPAFENTKTGIPYPRVNLKTGVPPDSNNETCTAGAGSLLVEFGILSRLLGDSTFEWVARRAVKALWNLRSNDTGLLGNVVNIQTGHWVGKQSGLGAGLDSFYEYLLKSYILFGEKEDLEMFNAAYQSIQNYLRRGREACNEGEGDPPLYVNVNMFSGQLMNTWIDSLQAFFPGLQVLIGDVEDAICLHAFYYAIWKRYGALPERYNWQLQAPDVLFYPLRPELVESTYLLYQATKNPFYLHVGMDILQSLEKYTKVKCGYATLHHVIDKSTEDRMESFFLSETCKYLYLLFDEENPVHKSGTRYVFTTEGHVVSVDKHLRESPWKEFFWEDQEGKSVHRPKSHELKVINSSSNCNRVPDERRYSLPLKSIYMRQIDQMVGLI
SIO_010081: EDEM1
subclass of: SO_0000673
so part of: EDEM1
location: complement(join(713616..713705,715353..715544,721851..721947,722831..722904,725117..725287,726140..726260,727878..728052,730689..730872,731871..732042,733252..733355,737717..737789,743546..744061))
location: region:713616-744061:-1
so has part: feature:743546-744061:-1:exon
so has part: feature:737717-737789:-1:exon
so has part: feature:733252-733355:-1:exon
so has part: feature:731871-732042:-1:exon
so has part: feature:730689-730872:-1:exon
so has part: feature:727878-728052:-1:exon
so has part: feature:726140-726260:-1:exon
so has part: feature:725117-725287:-1:exon
so has part: feature:722831-722904:-1:exon
so has part: feature:721851-721947:-1:exon
so has part: feature:715353-715544:-1:exon
so has part: feature:713616-713705:-1:exon

XP_012616615.2
type: Protein
SIO_000068: ncbiprotein

position:713616:-1
position: 713616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744061:-1
position: 744061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743546-744061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:737717-737789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:733252-733355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731871-732042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:730689-730872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727878-728052:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:726140-726260:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:725117-725287:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:722831-722904:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:721851-721947:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:715353-715544:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:713616-713705:-1:exon

ARL8B
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: ARL8B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(764099..794502)
location: region:764099-794502:-1
so has part: feature:764099-794502:-1:exon
subclass of: SO_0000010

105869402
type: Gene
SIO_000068: ncbigene

position:764099:-1
position: 764099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794502:-1
position: 794502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764099-794502:-1:exon

ARL8B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARL8B
product: ADP ribosylation factor like GTPase 8B
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 426 ESTs, 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012761160.2
SIO_010081: ARL8B
subclass of: SO_0000673
so part of: ARL8B
location: complement(join(764099..766365,770235..770305,770575..770642,773219..773312,773717..773790,775514..775594,794220..794502))
location: region:764099-794502:-1
so has part: feature:794220-794502:-1:exon
so has part: feature:775514-775594:-1:exon
so has part: feature:773717-773790:-1:exon
so has part: feature:773219-773312:-1:exon
so has part: feature:770575-770642:-1:exon
so has part: feature:770235-770305:-1:exon
so has part: feature:764099-766365:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:794220-794502:-1:exon

position:794220:-1
position: 794220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:775514-775594:-1:exon

position:775514:-1
position: 775514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775594:-1
position: 775594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:773717-773790:-1:exon

position:773717:-1
position: 773717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773790:-1
position: 773790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:773219-773312:-1:exon

position:773219:-1
position: 773219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773312:-1
position: 773312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:770575-770642:-1:exon

position:770575:-1
position: 770575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770642:-1
position: 770642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:770235-770305:-1:exon

position:770235:-1
position: 770235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770305:-1
position: 770305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:764099-766365:-1:exon

position:766365:-1
position: 766365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL8B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARL8B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ADP-ribosylation factor-like protein 8B
translation: MTCSASWLRAAPPARVRPCRAGAPRSRWXVRAEARLCGSRRRPCPPPRPAAAIMLALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHSKSRRS
SIO_010081: ARL8B
subclass of: SO_0000673
so part of: ARL8B
location: complement(join(766316..766365,770235..770305,770575..770642,773219..773312,773717..773790,775514..775594,794220..794502))
location: region:766316-794502:-1
so has part: feature:794220-794502:-1:exon
so has part: feature:775514-775594:-1:exon
so has part: feature:773717-773790:-1:exon
so has part: feature:773219-773312:-1:exon
so has part: feature:770575-770642:-1:exon
so has part: feature:770235-770305:-1:exon
so has part: feature:766316-766365:-1:exon

XP_012616614.2
type: Protein
SIO_000068: ncbiprotein

position:766316:-1
position: 766316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794220-794502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775514-775594:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:773717-773790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:773219-773312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:770575-770642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:770235-770305:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:766316-766365:-1:exon

BHLHE40
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: BHLHE40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(894391..900069)
location: region:894391-900069:-1
so has part: feature:894391-900069:-1:exon
subclass of: SO_0000010

105869404
type: Gene
SIO_000068: ncbigene

position:894391:-1
position: 894391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900069:-1
position: 900069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:894391-900069:-1:exon

BHLHE40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: BHLHE40
product: basic helix-loop-helix family member e40
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 113 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012761162.2
SIO_010081: BHLHE40
subclass of: SO_0000673
so part of: BHLHE40
location: complement(join(894391..896795,898102..898225,899134..899241,899476..899545,899687..900069))
location: region:894391-900069:-1
so has part: feature:899687-900069:-1:exon
so has part: feature:899476-899545:-1:exon
so has part: feature:899134-899241:-1:exon
so has part: feature:898102-898225:-1:exon
so has part: feature:894391-896795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:899687-900069:-1:exon

position:899687:-1
position: 899687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:899476-899545:-1:exon

position:899476:-1
position: 899476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899545:-1
position: 899545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:899134-899241:-1:exon

position:899134:-1
position: 899134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899241:-1
position: 899241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:898102-898225:-1:exon

position:898102:-1
position: 898102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898225:-1
position: 898225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:894391-896795:-1:exon

position:896795:-1
position: 896795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BHLHE40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: BHLHE40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class E basic helix-loop-helix protein 40
translation: MERIPSAQPPPVCMPKAPGPERGDLPGMDFAHMYQVYKSRRGMKRGEDSKETYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIVTLQSGLQAGELSGRSVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLRSSQLVTHLHRVVSELLQGGLSRKPPPDAAPKAVTDFKEKAGSLAKGSEGPGKNCVPVIQRTFAPSSGEQSGSDTDTDSGYGGESEKGDPRAEPSFGSARARSRCAGDRVGAIKQESEEPPTKKSRLQLSEDEGHFPGGDLLGNPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNASAAALGSFMSPDKVSAPLLMPQRLPSPLQAHPAVDSSVLLQALKQIPPLNLETKD
SIO_010081: BHLHE40
subclass of: SO_0000673
so part of: BHLHE40
location: complement(join(895936..896795,898102..898225,899134..899241,899476..899545,899687..899766))
location: region:895936-899766:-1
so has part: feature:899687-899766:-1:exon
so has part: feature:899476-899545:-1:exon
so has part: feature:899134-899241:-1:exon
so has part: feature:898102-898225:-1:exon
so has part: feature:895936-896795:-1:exon

XP_012616616.1
type: Protein
SIO_000068: ncbiprotein

position:895936:-1
position: 895936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899766:-1
position: 899766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899687-899766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:899476-899545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899134-899241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898102-898225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:895936-896795:-1:exon

LOC105869392
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869392
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 912743..976274
location: region:912743-976274:1
so has part: feature:912743-976274:1:exon
subclass of: SO_0000011

105869392
type: Gene
SIO_000068: ncbigene

position:912743:1
position: 912743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976274:1
position: 976274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:912743-976274:1:exon

LOC105869392
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869392
product: uncharacterized LOC105869392, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001153163.2
SIO_010081: LOC105869392
subclass of: SO_0000673
so part of: LOC105869392
location: join(912743..913129,916193..916346,958934..959335,961039..961104,975461..976274)
location: region:912743-976274:1
so has part: feature:912743-913129:1:exon
so has part: feature:916193-916346:1:exon
so has part: feature:958934-959335:1:exon
so has part: feature:961039-961104:1:exon
so has part: feature:975461-976274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:912743-913129:1:exon

position:913129:1
position: 913129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:916193-916346:1:exon

position:916193:1
position: 916193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916346:1
position: 916346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:958934-959335:1:exon

position:958934:1
position: 958934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959335:1
position: 959335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:961039-961104:1:exon

position:961039:1
position: 961039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961104:1
position: 961104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:975461-976274:1:exon

position:975461:1
position: 975461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105869392
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869392
product: uncharacterized LOC105869392, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001153164.1
SIO_010081: LOC105869392
subclass of: SO_0000673
so part of: LOC105869392
location: join(913136..913493,916193..916346,958934..959335,961039..961104,970999..971065,975461..976274)
location: region:913136-976274:1
so has part: feature:913136-913493:1:exon
so has part: feature:916193-916346:1:exon
so has part: feature:958934-959335:1:exon
so has part: feature:961039-961104:1:exon
so has part: feature:970999-971065:1:exon
so has part: feature:975461-976274:1:exon

position:913136:1
position: 913136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913136-913493:1:exon

position:913493:1
position: 913493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:916193-916346:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958934-959335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:961039-961104:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:970999-971065:1:exon

position:970999:1
position: 970999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971065:1
position: 971065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:975461-976274:1:exon

LOC105869392
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869392
product: uncharacterized LOC105869392, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001153162.1
SIO_010081: LOC105869392
subclass of: SO_0000673
so part of: LOC105869392
location: join(913136..913493,916193..916346,958934..959335,961039..961104,975461..976274)
location: region:913136-976274:1
so has part: feature:913136-913493:1:exon
so has part: feature:916193-916346:1:exon
so has part: feature:958934-959335:1:exon
so has part: feature:961039-961104:1:exon
so has part: feature:975461-976274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:913136-913493:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:916193-916346:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958934-959335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:961039-961104:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:975461-976274:1:exon

LOC105869391
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869391
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(979039..981569)
location: region:979039-981569:-1
so has part: feature:979039-981569:-1:exon
subclass of: SO_0000010

105869391
type: Gene
SIO_000068: ncbigene

position:979039:-1
position: 979039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981569:-1
position: 981569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979039-981569:-1:exon

LOC105869391
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105869391
product: protein-tyrosine sulfotransferase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012761149.2
SIO_010081: LOC105869391
subclass of: SO_0000673
so part of: LOC105869391
location: complement(979039..981569)
location: region:979039-981569:-1
so has part: feature:979039-981569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:979039-981569:-1:exon

LOC105869391
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105869391
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-tyrosine sulfotransferase 2-like
translation: MRPFYGSEREDRGAHPSPAGRPESRSRRAPGAAGIAVLVHGVSRAGGQLAGASLESQSRVPRPGLHPQGPNTRRRRGMRLSPRRALLAAGCALALAAVAQLALQVRRCRAALAGPRWAMRPEREELALVGADRVEHRYGHGAPLVFVGGVPRSGTTLMRAMLDAHPEVRCGQETRIIPRVLALRQAWARPGAAGEEEEEGGPVPAAVLDAATQAFILQVVARHGEPARVLCNKDPFTLRSAVYLAGLFPGAKFLLMLRDGRASVHSMITRRVTVAGFDLGSYRDCLARWSQAVQAMHAQCAALGRARCLPVRYEQLVLHPRRSLERVLAFLGLAWSDAVLHHEDLVGRPGGVALSKVEPSTEQVIKPVNLQALSRWAGHLPADVVRDMARIAPMLARLGYDPYANPPDYGHPDPEVVDNTRRVLRGDYKTPASLKGYLPVTRNDTRSAPPPRVGGS
SIO_010081: LOC105869391
subclass of: SO_0000673
so part of: LOC105869391
location: complement(980024..981394)
location: region:980024-981394:-1
so has part: feature:980024-981394:-1:exon

XP_012616603.1
type: Protein
SIO_000068: ncbiprotein

position:980024:-1
position: 980024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981394:-1
position: 981394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980024-981394:-1:exon

ITPR1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: ITPR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(991820..1395327)
location: region:991820-1395327:-1
so has part: feature:991820-1395327:-1:exon
subclass of: SO_0000010

105869384
type: Gene
SIO_000068: ncbigene

position:991820:-1
position: 991820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395327:-1
position: 1395327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991820-1395327:-1:exon

ITPR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ITPR1
product: inositol 1,4,5-trisphosphate receptor type 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 173 ESTs, 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284216.1
SIO_010081: ITPR1
subclass of: SO_0000673
so part of: ITPR1
location: complement(join(991820..993155,1001537..1001698,1026640..1026800,1029802..1029967,1030789..1030928,1033097..1033189,1034972..1035167,1041118..1041282,1047764..1047939,1054899..1055021,1061373..1061549,1063340..1063487,1064764..1064886,1067832..1067927,1070368..1070478,1072305..1072505,1076959..1077204,1077914..1077929,1078674..1078843,1116922..1117112,1119740..1119872,1125115..1125165,1126651..1126689,1135191..1135223,1140191..1140302,1141271..1141419,1145651..1145835,1147764..1147884,1150266..1150409,1153568..1153693,1156635..1156886,1159258..1159356,1160446..1160589,1165075..1165212,1172153..1172218,1172694..1172864,1172958..1173123,1174318..1174372,1175100..1175238,1180309..1180496,1181493..1181673,1182761..1182902,1184078..1184329,1185482..1185676,1186979..1187098,1188245..1188417,1190893..1191051,1195333..1195474,1195969..1196129,1197240..1197339,1202147..1202301,1208357..1208505,1211526..1211673,1217626..1217889,1220209..1220295,1241163..1241278,1362507..1362577,1366455..1366560,1394156..1394232,1395121..1395327))
location: region:991820-1395327:-1
so has part: feature:1395121-1395327:-1:exon
so has part: feature:1394156-1394232:-1:exon
so has part: feature:1366455-1366560:-1:exon
so has part: feature:1362507-1362577:-1:exon
so has part: feature:1241163-1241278:-1:exon
so has part: feature:1220209-1220295:-1:exon
so has part: feature:1217626-1217889:-1:exon
so has part: feature:1211526-1211673:-1:exon
so has part: feature:1208357-1208505:-1:exon
so has part: feature:1202147-1202301:-1:exon
so has part: feature:1197240-1197339:-1:exon
so has part: feature:1195969-1196129:-1:exon
so has part: feature:1195333-1195474:-1:exon
so has part: feature:1190893-1191051:-1:exon
so has part: feature:1188245-1188417:-1:exon
so has part: feature:1186979-1187098:-1:exon
so has part: feature:1185482-1185676:-1:exon
so has part: feature:1184078-1184329:-1:exon
so has part: feature:1182761-1182902:-1:exon
so has part: feature:1181493-1181673:-1:exon
so has part: feature:1180309-1180496:-1:exon
so has part: feature:1175100-1175238:-1:exon
so has part: feature:1174318-1174372:-1:exon
so has part: feature:1172958-1173123:-1:exon
so has part: feature:1172694-1172864:-1:exon
so has part: feature:1172153-1172218:-1:exon
so has part: feature:1165075-1165212:-1:exon
so has part: feature:1160446-1160589:-1:exon
so has part: feature:1159258-1159356:-1:exon
so has part: feature:1156635-1156886:-1:exon
so has part: feature:1153568-1153693:-1:exon
so has part: feature:1150266-1150409:-1:exon
so has part: feature:1147764-1147884:-1:exon
so has part: feature:1145651-1145835:-1:exon
so has part: feature:1141271-1141419:-1:exon
so has part: feature:1140191-1140302:-1:exon
so has part: feature:1135191-1135223:-1:exon
so has part: feature:1126651-1126689:-1:exon
so has part: feature:1125115-1125165:-1:exon
so has part: feature:1119740-1119872:-1:exon
so has part: feature:1116922-1117112:-1:exon
so has part: feature:1078674-1078843:-1:exon
so has part: feature:1077914-1077929:-1:exon
so has part: feature:1076959-1077204:-1:exon
so has part: feature:1072305-1072505:-1:exon
so has part: feature:1070368-1070478:-1:exon
so has part: feature:1067832-1067927:-1:exon
so has part: feature:1064764-1064886:-1:exon
so has part: feature:1063340-1063487:-1:exon
so has part: feature:1061373-1061549:-1:exon
so has part: feature:1054899-1055021:-1:exon
so has part: feature:1047764-1047939:-1:exon
so has part: feature:1041118-1041282:-1:exon
so has part: feature:1034972-1035167:-1:exon
so has part: feature:1033097-1033189:-1:exon
so has part: feature:1030789-1030928:-1:exon
so has part: feature:1029802-1029967:-1:exon
so has part: feature:1026640-1026800:-1:exon
so has part: feature:1001537-1001698:-1:exon
so has part: feature:991820-993155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1395121-1395327:-1:exon

position:1395121:-1
position: 1395121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1394156-1394232:-1:exon

position:1394156:-1
position: 1394156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394232:-1
position: 1394232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1366455-1366560:-1:exon

position:1366455:-1
position: 1366455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366560:-1
position: 1366560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1362507-1362577:-1:exon

position:1362507:-1
position: 1362507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362577:-1
position: 1362577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1241163-1241278:-1:exon

position:1241163:-1
position: 1241163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241278:-1
position: 1241278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1220209-1220295:-1:exon

position:1220209:-1
position: 1220209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220295:-1
position: 1220295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1217626-1217889:-1:exon

position:1217626:-1
position: 1217626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217889:-1
position: 1217889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1211526-1211673:-1:exon

position:1211526:-1
position: 1211526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211673:-1
position: 1211673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1208357-1208505:-1:exon

position:1208357:-1
position: 1208357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208505:-1
position: 1208505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1202147-1202301:-1:exon

position:1202147:-1
position: 1202147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202301:-1
position: 1202301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1197240-1197339:-1:exon

position:1197240:-1
position: 1197240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197339:-1
position: 1197339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1195969-1196129:-1:exon

position:1195969:-1
position: 1195969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196129:-1
position: 1196129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1195333-1195474:-1:exon

position:1195333:-1
position: 1195333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1195474:-1
position: 1195474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1190893-1191051:-1:exon

position:1190893:-1
position: 1190893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191051:-1
position: 1191051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1188245-1188417:-1:exon

position:1188245:-1
position: 1188245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1188417:-1
position: 1188417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1186979-1187098:-1:exon

position:1186979:-1
position: 1186979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187098:-1
position: 1187098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1185482-1185676:-1:exon

position:1185482:-1
position: 1185482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185676:-1
position: 1185676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1184078-1184329:-1:exon

position:1184078:-1
position: 1184078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184329:-1
position: 1184329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1182761-1182902:-1:exon

position:1182761:-1
position: 1182761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182902:-1
position: 1182902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1181493-1181673:-1:exon

position:1181493:-1
position: 1181493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181673:-1
position: 1181673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1180309-1180496:-1:exon

position:1180309:-1
position: 1180309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180496:-1
position: 1180496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1175100-1175238:-1:exon

position:1175100:-1
position: 1175100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175238:-1
position: 1175238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1174318-1174372:-1:exon

position:1174318:-1
position: 1174318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174372:-1
position: 1174372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1172958-1173123:-1:exon

position:1172958:-1
position: 1172958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173123:-1
position: 1173123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1172694-1172864:-1:exon

position:1172694:-1
position: 1172694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172864:-1
position: 1172864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1172153-1172218:-1:exon

position:1172153:-1
position: 1172153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172218:-1
position: 1172218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1165075-1165212:-1:exon

position:1165075:-1
position: 1165075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165212:-1
position: 1165212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1160446-1160589:-1:exon

position:1160446:-1
position: 1160446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160589:-1
position: 1160589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1159258-1159356:-1:exon

position:1159258:-1
position: 1159258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159356:-1
position: 1159356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1156635-1156886:-1:exon

position:1156635:-1
position: 1156635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156886:-1
position: 1156886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1153568-1153693:-1:exon

position:1153568:-1
position: 1153568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153693:-1
position: 1153693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1150266-1150409:-1:exon

position:1150266:-1
position: 1150266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150409:-1
position: 1150409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1147764-1147884:-1:exon

position:1147764:-1
position: 1147764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147884:-1
position: 1147884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1145651-1145835:-1:exon

position:1145651:-1
position: 1145651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145835:-1
position: 1145835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1141271-1141419:-1:exon

position:1141271:-1
position: 1141271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141419:-1
position: 1141419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1140191-1140302:-1:exon

position:1140191:-1
position: 1140191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140302:-1
position: 1140302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1135191-1135223:-1:exon

position:1135191:-1
position: 1135191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135223:-1
position: 1135223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1126651-1126689:-1:exon

position:1126651:-1
position: 1126651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126689:-1
position: 1126689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1125115-1125165:-1:exon

position:1125115:-1
position: 1125115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125165:-1
position: 1125165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1119740-1119872:-1:exon

position:1119740:-1
position: 1119740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119872:-1
position: 1119872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1116922-1117112:-1:exon

position:1116922:-1
position: 1116922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117112:-1
position: 1117112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1078674-1078843:-1:exon

position:1078674:-1
position: 1078674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078843:-1
position: 1078843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1077914-1077929:-1:exon

position:1077914:-1
position: 1077914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077929:-1
position: 1077929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1076959-1077204:-1:exon

position:1076959:-1
position: 1076959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077204:-1
position: 1077204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1072305-1072505:-1:exon

position:1072305:-1
position: 1072305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072505:-1
position: 1072505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1070368-1070478:-1:exon

position:1070368:-1
position: 1070368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070478:-1
position: 1070478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1067832-1067927:-1:exon

position:1067832:-1
position: 1067832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067927:-1
position: 1067927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1064764-1064886:-1:exon

position:1064764:-1
position: 1064764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064886:-1
position: 1064886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1063340-1063487:-1:exon

position:1063340:-1
position: 1063340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1063487:-1
position: 1063487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1061373-1061549:-1:exon

position:1061373:-1
position: 1061373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061549:-1
position: 1061549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:1054899-1055021:-1:exon

position:1054899:-1
position: 1054899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055021:-1
position: 1055021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:1047764-1047939:-1:exon

position:1047764:-1
position: 1047764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1047939:-1
position: 1047939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:1041118-1041282:-1:exon

position:1041118:-1
position: 1041118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041282:-1
position: 1041282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:1034972-1035167:-1:exon

position:1034972:-1
position: 1034972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035167:-1
position: 1035167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:1033097-1033189:-1:exon

position:1033097:-1
position: 1033097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033189:-1
position: 1033189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:1030789-1030928:-1:exon

position:1030789:-1
position: 1030789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030928:-1
position: 1030928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:1029802-1029967:-1:exon

position:1029802:-1
position: 1029802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029967:-1
position: 1029967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:1026640-1026800:-1:exon

position:1026640:-1
position: 1026640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026800:-1
position: 1026800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 59
SIO_000628: feature:1001537-1001698:-1:exon

position:1001537:-1
position: 1001537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001698:-1
position: 1001698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:991820-993155:-1:exon

position:993155:-1
position: 993155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ITPR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ITPR1
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1061497..1061499),aa:OTHER)
product: LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor type 1
translation: MSDKMSSFLHIGDICSLYAEGSTNGFISTLGLVDDRCVVQPETGDLNNPPKKFRDCLFKLCPMNRYSAQKQFWKAAKPGANSTTDAVLLNKLHHAADLEKKQNETENRKLLGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEAGNEGSWFYIQPFYKLRSIGDSVSAGPGLEGAVPSPSPSCVVESACGSSGRAWGSGLVNGPVRCLESTVHAEQEKFLTCDEHRKKQHVFLRTTAASRPTSATSSKPSWAETSPPPSDRSSPLLQVVQHDPCRGGAGYWNSLFRFKHLATGHYLAAEVDPDQDASRSRLRNAQEKMVYSLVSVPEGNDISSIFELDPTTLRGGDSLVPRNSYVRLRHLCTNTWVHSTNIPIDKEEEKPVMLKIGTSPVKEDKEAFAIVPVSPAEVRDLDFANDASKVLGSIAGKLEKGTITQNERRSVTKLLEDLVYFVTGGTNSGQDVLEVVFSKPNRERQKLMREQNILKQIFKLLQAPFTDCGDGPMLRLEELGDQRHAPFRHICRLCYRVLRHSQQDYRKNQEYIAKQFGFMQKQIGYDVLAEDTITALLHNNRKLLEKHITAAEIDTFVSLVRKNREPRFLDYLSDLCVSMNKSIPVTQELICKAVLNPTNADILIETKLVLSRFEFEGVSTGESALEAAEDEEEVWLFWRDSDKEIRSKSVRELAQDAKEGQKEDRDVLSYYRYQLNLFARMCLDRQYLAINEISGQLDVDLILRCMSDENLPYDLRASFCRLMLHMHVDRDPQEQVTPVKYARLWSEIPSEIAIDDYDSSGASKDEIKERFAQTMEFVEEYLRDVVCQRFPFSDKEKNKLTFEVVNLARNLIYFGFYNFSDLLRLTKILLAILDCVHVTTIFPISKMPKGDESKGNDEVEKLKSSNVMRSIHGVGELMTQVVLRGGGFLPMAPMAAAPEGNVKQAEPEKEDIMVMDTKLKIIEILQFILNVRLDYRISCLLCIFKREFDESNSQTSETSSGNSSQEGPSNVPGALDFEHIEEQAEGIFGGSEENTPLDLDDHGGRTFLRVLLHLTMHDYPPLVSGALQLLFRHFSQRQEVLQAFKQVQLLVTSQDVDNYKQIKQDLDQLRSIVEKSELWVYKGQGPDETMDGASGENGHKKAEDGNNKSQKHESTSSYNYRVVKEILIRLSKLCVQEGATVRKSRKQQQRLLRNMGAHAVVLELLQIPYEKAEDTKMQEIMRLAHEFLQNFCAGNQQNQALLHKHINLFLNPGVRLGAWSVKLTLSPAMQEVAAEGSIGQSTAVRHLKQIAKLVNSGEDVLVFYNDRASFQTLIQMMRSERDRMDENSPLMYHIHLVELLAVCTEGKNVYTEIKCNSLLPLDDIVRVVTHEDCLPEVKIAYINFLNHCYVDTEVEMKEIYTSNHMWKLFENFLVDICRAPVVRSLHNTSDRKHADSVLEKYVTEIVMSIVTTFFSSPFSDQSTTLQTRQPVFVQLLQGVFRVYHCNWLAPSQKASVESCIRVLSDVAKSRAIAIPVDLDSQVNNLFLKSHNIVQKTAMNWRLSARNAARRDSVLAASRDYRNIIERLQDIVSALEDRLRPLVQAELSVLVDVLHRPELLFPENTDARRKCESGGFICKLIKHTKQLLEENEEKLCIKVLQTLREMMTKDRGYGEKLISIDELDNAELPPAPDAENATAEQEVEASPPLRQLEDHKRGEALRQILVNRYYGNIRPSGRRESLTSFGNGPLSPGGPSKPGGGGGGSGSGSMSRGEMSLAEVQCHLDKEGASNLVIDLIMNATSDRVFHESILLAIALLEGGNTTIQHSFFCRLTEDKKSEKFFKVFYDRMKVAQQEIKATVTVNTSDLGNKKKEDETDREEKRRKRRREPAPQITEEARDQLLDASAATRKAFSTFRREADPDDHYQASGRGPARRTAQDDWEMSAVITIMQPILRFLQLLCENHNRDLQNFLRCQNNKTNYNLVCETLQFLDCICGSTTGGLGLLGLYINEKNVALINQTLE…
SIO_010081: ITPR1
subclass of: SO_0000673
so part of: ITPR1
location: complement(join(993069..993155,1001537..1001698,1026640..1026800,1029802..1029967,1030789..1030928,1033097..1033189,1034972..1035167,1041118..1041282,1047764..1047939,1054899..1055021,1061373..1061549,1063340..1063487,1064764..1064886,1067832..1067927,1070368..1070478,1072305..1072505,1076959..1077204,1077914..1077929,1078674..1078843,1116922..1117112,1119740..1119872,1125115..1125165,1126651..1126689,1135191..1135223,1140191..1140302,1141271..1141419,1145651..1145835,1147764..1147884,1150266..1150409,1153568..1153693,1156635..1156886,1159258..1159356,1160446..1160589,1165075..1165212,1172153..1172218,1172694..1172864,1172958..1173123,1174318..1174372,1175100..1175238,1180309..1180496,1181493..1181673,1182761..1182902,1184078..1184329,1185482..1185676,1186979..1187098,1188245..1188417,1190893..1191051,1195333..1195474,1195969..1196129,1197240..1197339,1202147..1202301,1208357..1208505,1211526..1211673,1217626..1217889,1220209..1220295,1241163..1241278,1362507..1362577,1366455..1366546))
location: region:993069-1366546:-1
so has part: feature:1366455-1366546:-1:exon
so has part: feature:1362507-1362577:-1:exon
so has part: feature:1241163-1241278:-1:exon
so has part: feature:1220209-1220295:-1:exon
so has part: feature:1217626-1217889:-1:exon
so has part: feature:1211526-1211673:-1:exon
so has part: feature:1208357-1208505:-1:exon
so has part: feature:1202147-1202301:-1:exon
so has part: feature:1197240-1197339:-1:exon
so has part: feature:1195969-1196129:-1:exon
so has part: feature:1195333-1195474:-1:exon
so has part: feature:1190893-1191051:-1:exon
so has part: feature:1188245-1188417:-1:exon
so has part: feature:1186979-1187098:-1:exon
so has part: feature:1185482-1185676:-1:exon
so has part: feature:1184078-1184329:-1:exon
so has part: feature:1182761-1182902:-1:exon
so has part: feature:1181493-1181673:-1:exon
so has part: feature:1180309-1180496:-1:exon
so has part: feature:1175100-1175238:-1:exon
so has part: feature:1174318-1174372:-1:exon
so has part: feature:1172958-1173123:-1:exon
so has part: feature:1172694-1172864:-1:exon
so has part: feature:1172153-1172218:-1:exon
so has part: feature:1165075-1165212:-1:exon
so has part: feature:1160446-1160589:-1:exon
so has part: feature:1159258-1159356:-1:exon
so has part: feature:1156635-1156886:-1:exon
so has part: feature:1153568-1153693:-1:exon
so has part: feature:1150266-1150409:-1:exon
so has part: feature:1147764-1147884:-1:exon
so has part: feature:1145651-1145835:-1:exon
so has part: feature:1141271-1141419:-1:exon
so has part: feature:1140191-1140302:-1:exon
so has part: feature:1135191-1135223:-1:exon
so has part: feature:1126651-1126689:-1:exon
so has part: feature:1125115-1125165:-1:exon
so has part: feature:1119740-1119872:-1:exon
so has part: feature:1116922-1117112:-1:exon
so has part: feature:1078674-1078843:-1:exon
so has part: feature:1077914-1077929:-1:exon
so has part: feature:1076959-1077204:-1:exon
so has part: feature:1072305-1072505:-1:exon
so has part: feature:1070368-1070478:-1:exon
so has part: feature:1067832-1067927:-1:exon
so has part: feature:1064764-1064886:-1:exon
so has part: feature:1063340-1063487:-1:exon
so has part: feature:1061373-1061549:-1:exon
so has part: feature:1054899-1055021:-1:exon
so has part: feature:1047764-1047939:-1:exon
so has part: feature:1041118-1041282:-1:exon
so has part: feature:1034972-1035167:-1:exon
so has part: feature:1033097-1033189:-1:exon
so has part: feature:1030789-1030928:-1:exon
so has part: feature:1029802-1029967:-1:exon
so has part: feature:1026640-1026800:-1:exon
so has part: feature:1001537-1001698:-1:exon
so has part: feature:993069-993155:-1:exon

XP_020139805.1
type: Protein
SIO_000068: ncbiprotein

position:993069:-1
position: 993069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366546:-1
position: 1366546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366455-1366546:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1362507-1362577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241163-1241278:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220209-1220295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1217626-1217889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1211526-1211673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1208357-1208505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1202147-1202301:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197240-1197339:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1195969-1196129:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1195333-1195474:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1190893-1191051:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1188245-1188417:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1186979-1187098:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1185482-1185676:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1184078-1184329:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1182761-1182902:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1181493-1181673:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1180309-1180496:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1175100-1175238:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1174318-1174372:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1172958-1173123:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1172694-1172864:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1172153-1172218:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1165075-1165212:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1160446-1160589:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1159258-1159356:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1156635-1156886:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1153568-1153693:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1150266-1150409:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1147764-1147884:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1145651-1145835:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1141271-1141419:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1140191-1140302:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1135191-1135223:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1126651-1126689:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1125115-1125165:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1119740-1119872:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1116922-1117112:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1078674-1078843:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1077914-1077929:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1076959-1077204:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1072305-1072505:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1070368-1070478:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1067832-1067927:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1064764-1064886:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1063340-1063487:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1061373-1061549:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1054899-1055021:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1047764-1047939:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1041118-1041282:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1034972-1035167:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1033097-1033189:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1030789-1030928:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1029802-1029967:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1026640-1026800:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1001537-1001698:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:993069-993155:-1:exon

SUMF1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: SUMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1436043..1519046
location: region:1436043-1519046:1
so has part: feature:1436043-1519046:1:exon
subclass of: SO_0000010

105869396
type: Gene
SIO_000068: ncbigene

position:1436043:1
position: 1436043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1519046:1
position: 1519046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436043-1519046:1:exon

SUMF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SUMF1
product: sulfatase modifying factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 46 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012761154.1
SIO_010081: SUMF1
subclass of: SO_0000673
so part of: SUMF1
location: join(1436043..1436344,1448487..1448660,1454719..1454793,1477315..1477397,1479666..1479788,1480896..1481010,1486576..1486689,1508892..1508951,1518612..1519046)
location: region:1436043-1519046:1
so has part: feature:1436043-1436344:1:exon
so has part: feature:1448487-1448660:1:exon
so has part: feature:1454719-1454793:1:exon
so has part: feature:1477315-1477397:1:exon
so has part: feature:1479666-1479788:1:exon
so has part: feature:1480896-1481010:1:exon
so has part: feature:1486576-1486689:1:exon
so has part: feature:1508892-1508951:1:exon
so has part: feature:1518612-1519046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1436043-1436344:1:exon

position:1436344:1
position: 1436344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1448487-1448660:1:exon

position:1448487:1
position: 1448487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1448660:1
position: 1448660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1454719-1454793:1:exon

position:1454719:1
position: 1454719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1454793:1
position: 1454793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1477315-1477397:1:exon

position:1477315:1
position: 1477315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1477397:1
position: 1477397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1479666-1479788:1:exon

position:1479666:1
position: 1479666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1479788:1
position: 1479788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1480896-1481010:1:exon

position:1480896:1
position: 1480896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1481010:1
position: 1481010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1486576-1486689:1:exon

position:1486576:1
position: 1486576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486689:1
position: 1486689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1508892-1508951:1:exon

position:1508892:1
position: 1508892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1508951:1
position: 1508951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1518612-1519046:1:exon

position:1518612:1
position: 1518612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUMF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SUMF1
product: sulfatase modifying factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012761155.1
SIO_010081: SUMF1
subclass of: SO_0000673
so part of: SUMF1
location: join(1436043..1436344,1448487..1448660,1477315..1477397,1479666..1479788,1480896..1481010,1486576..1486689,1508892..1508951,1518612..1519046)
location: region:1436043-1519046:1
so has part: feature:1436043-1436344:1:exon
so has part: feature:1448487-1448660:1:exon
so has part: feature:1477315-1477397:1:exon
so has part: feature:1479666-1479788:1:exon
so has part: feature:1480896-1481010:1:exon
so has part: feature:1486576-1486689:1:exon
so has part: feature:1508892-1508951:1:exon
so has part: feature:1518612-1519046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1436043-1436344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1448487-1448660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1477315-1477397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1479666-1479788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1480896-1481010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1486576-1486689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1508892-1508951:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1518612-1519046:1:exon

SUMF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SUMF1
product: sulfatase modifying factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012761156.2
SIO_010081: SUMF1
subclass of: SO_0000673
so part of: SUMF1
location: join(1436043..1436344,1448487..1448660,1454719..1454793,1477315..1477397,1479666..1479788,1480896..1481010,1486576..1486689,1508892..1508951,1509880..1510218)
location: region:1436043-1510218:1
so has part: feature:1436043-1436344:1:exon
so has part: feature:1448487-1448660:1:exon
so has part: feature:1454719-1454793:1:exon
so has part: feature:1477315-1477397:1:exon
so has part: feature:1479666-1479788:1:exon
so has part: feature:1480896-1481010:1:exon
so has part: feature:1486576-1486689:1:exon
so has part: feature:1508892-1508951:1:exon
so has part: feature:1509880-1510218:1:exon

position:1510218:1
position: 1510218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436043-1436344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1448487-1448660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1454719-1454793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1477315-1477397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1479666-1479788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1480896-1481010:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1486576-1486689:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1508892-1508951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1509880-1510218:1:exon

position:1509880:1
position: 1509880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUMF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SUMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfatase-modifying factor 1 isoform X1
translation: MAAPALGPASGRFPGLTGVLWLPLLALLCGAAGGEEAASGAGAASLAGSCGCGTPQRPGAPGSSAAAPRYSREANAPGPAPGERALTTTKMVLIPAGVFTMGTDDPQIKQDGEGPARRVAIDAFYMDAYEVSNAEFEKFVNSTGYLTEAEKFGDSFVFEGMLSEQVKTDVQQAVAAAPWWLPVKGADWRHPEGPDSTVLHRPDHPVLHVSWNDAVAYCAWAGKRLPTEAEWEYSCRGGLQNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFRGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSAEETLNPKGPPSGKDRVKKGGSYMCHRSYCYRYRCAARSQNTPDSSSSNLGFRCAADRLPTTD
SIO_010081: SUMF1
subclass of: SO_0000673
so part of: SUMF1
location: join(1436075..1436344,1448487..1448660,1454719..1454793,1477315..1477397,1479666..1479788,1480896..1481010,1486576..1486689,1508892..1508951,1518612..1518722)
location: region:1436075-1518722:1
so has part: feature:1436075-1436344:1:exon
so has part: feature:1448487-1448660:1:exon
so has part: feature:1454719-1454793:1:exon
so has part: feature:1477315-1477397:1:exon
so has part: feature:1479666-1479788:1:exon
so has part: feature:1480896-1481010:1:exon
so has part: feature:1486576-1486689:1:exon
so has part: feature:1508892-1508951:1:exon
so has part: feature:1518612-1518722:1:exon

XP_012616608.1
type: Protein
SIO_000068: ncbiprotein

position:1436075:1
position: 1436075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518722:1
position: 1518722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436075-1436344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1448487-1448660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1454719-1454793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1477315-1477397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1479666-1479788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1480896-1481010:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1486576-1486689:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1508892-1508951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1518612-1518722:1:exon

SUMF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SUMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfatase-modifying factor 1 isoform X3
translation: MAAPALGPASGRFPGLTGVLWLPLLALLCGAAGGEEAASGAGAASLAGSCGCGTPQRPGAPGSSAAAPRYSREANAPGPAPGERALTTTKMVLIPAGVFTMGTDDPQIKQDGEGPARRVAIDAFYMDAYEVSNAEFEKFVNSTGYLTEVAAAPWWLPVKGADWRHPEGPDSTVLHRPDHPVLHVSWNDAVAYCAWAGKRLPTEAEWEYSCRGGLQNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFRGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSAEETLNPKGPPSGKDRVKKGGSYMCHRSYCYRYRCAARSQNTPDSSSSNLGFRCAADRLPTTD
SIO_010081: SUMF1
subclass of: SO_0000673
so part of: SUMF1
location: join(1436075..1436344,1448487..1448660,1477315..1477397,1479666..1479788,1480896..1481010,1486576..1486689,1508892..1508951,1518612..1518722)
location: region:1436075-1518722:1
so has part: feature:1436075-1436344:1:exon
so has part: feature:1448487-1448660:1:exon
so has part: feature:1477315-1477397:1:exon
so has part: feature:1479666-1479788:1:exon
so has part: feature:1480896-1481010:1:exon
so has part: feature:1486576-1486689:1:exon
so has part: feature:1508892-1508951:1:exon
so has part: feature:1518612-1518722:1:exon

XP_012616609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1436075-1436344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1448487-1448660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1477315-1477397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1479666-1479788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1480896-1481010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1486576-1486689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1508892-1508951:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1518612-1518722:1:exon

SUMF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SUMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfatase-modifying factor 1 isoform X2
translation: MAAPALGPASGRFPGLTGVLWLPLLALLCGAAGGEEAASGAGAASLAGSCGCGTPQRPGAPGSSAAAPRYSREANAPGPAPGERALTTTKMVLIPAGVFTMGTDDPQIKQDGEGPARRVAIDAFYMDAYEVSNAEFEKFVNSTGYLTEAEKFGDSFVFEGMLSEQVKTDVQQAVAAAPWWLPVKGADWRHPEGPDSTVLHRPDHPVLHVSWNDAVAYCAWAGKRLPTEAEWEYSCRGGLQNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFRGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSAEETLNPKGPPSGKDRVKKGGSYMCHRDVTRASDFLKLLM
SIO_010081: SUMF1
subclass of: SO_0000673
so part of: SUMF1
location: join(1436075..1436344,1448487..1448660,1454719..1454793,1477315..1477397,1479666..1479788,1480896..1481010,1486576..1486689,1508892..1508951,1509880..1509921)
location: region:1436075-1509921:1
so has part: feature:1436075-1436344:1:exon
so has part: feature:1448487-1448660:1:exon
so has part: feature:1454719-1454793:1:exon
so has part: feature:1477315-1477397:1:exon
so has part: feature:1479666-1479788:1:exon
so has part: feature:1480896-1481010:1:exon
so has part: feature:1486576-1486689:1:exon
so has part: feature:1508892-1508951:1:exon
so has part: feature:1509880-1509921:1:exon

XP_012616610.2
type: Protein
SIO_000068: ncbiprotein

position:1509921:1
position: 1509921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436075-1436344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1448487-1448660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1454719-1454793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1477315-1477397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1479666-1479788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1480896-1481010:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1486576-1486689:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1508892-1508951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1509880-1509921:1:exon

SUMF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SUMF1
product: sulfatase modifying factor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012761157.2
SIO_010081: SUMF1
subclass of: SO_0000673
so part of: SUMF1
location: join(1436376..1436435,1448487..1448660,1454719..1454793,1477315..1477397,1479666..1479788,1480896..1481010,1486576..1486689,1508892..1508951,1518612..1519046)
location: region:1436376-1519046:1
so has part: feature:1436376-1436435:1:exon
so has part: feature:1448487-1448660:1:exon
so has part: feature:1454719-1454793:1:exon
so has part: feature:1477315-1477397:1:exon
so has part: feature:1479666-1479788:1:exon
so has part: feature:1480896-1481010:1:exon
so has part: feature:1486576-1486689:1:exon
so has part: feature:1508892-1508951:1:exon
so has part: feature:1518612-1519046:1:exon

position:1436376:1
position: 1436376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436376-1436435:1:exon

position:1436435:1
position: 1436435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1448487-1448660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1454719-1454793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1477315-1477397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1479666-1479788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1480896-1481010:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1486576-1486689:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1508892-1508951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1518612-1519046:1:exon

SUMF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SUMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfatase-modifying factor 1 isoform X4
translation: MVLIPAGVFTMGTDDPQIKQDGEGPARRVAIDAFYMDAYEVSNAEFEKFVNSTGYLTEAEKFGDSFVFEGMLSEQVKTDVQQAVAAAPWWLPVKGADWRHPEGPDSTVLHRPDHPVLHVSWNDAVAYCAWAGKRLPTEAEWEYSCRGGLQNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFRGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSAEETLNPKGPPSGKDRVKKGGSYMCHRSYCYRYRCAARSQNTPDSSSSNLGFRCAADRLPTTD
SIO_010081: SUMF1
subclass of: SO_0000673
so part of: SUMF1
location: join(1448487..1448660,1454719..1454793,1477315..1477397,1479666..1479788,1480896..1481010,1486576..1486689,1508892..1508951,1518612..1518722)
location: region:1448487-1518722:1
so has part: feature:1448487-1448660:1:exon
so has part: feature:1454719-1454793:1:exon
so has part: feature:1477315-1477397:1:exon
so has part: feature:1479666-1479788:1:exon
so has part: feature:1480896-1481010:1:exon
so has part: feature:1486576-1486689:1:exon
so has part: feature:1508892-1508951:1:exon
so has part: feature:1518612-1518722:1:exon

XP_012616611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1448487-1448660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1454719-1454793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1477315-1477397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1479666-1479788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1480896-1481010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1486576-1486689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1508892-1508951:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1518612-1518722:1:exon

LOC105869398
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1461434..1463600
location: region:1461434-1463600:1
so has part: feature:1461434-1463600:1:exon

105869398
type: Gene
SIO_000068: ncbigene

position:1461434:1
position: 1461434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1463600:1
position: 1463600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1461434-1463600:1:exon

LOC105869398
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105869398
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105869398
subclass of: SO_0000673
so part of: LOC105869398
location: 1461434..1463600
location: region:1461434-1463600:1
so has part: feature:1461434-1463600:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1461434-1463600:1:exon

LOC105869395
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869395
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1536378..1546575)
location: region:1536378-1546575:-1
so has part: feature:1536378-1546575:-1:exon
subclass of: SO_0000010

105869395
type: Gene
SIO_000068: ncbigene

position:1536378:-1
position: 1536378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1546575:-1
position: 1546575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1536378-1546575:-1:exon

LOC105869395
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105869395
product: MAP/microtubule affinity-regulating kinase 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012761150.2
SIO_010081: LOC105869395
subclass of: SO_0000673
so part of: LOC105869395
location: complement(join(1536378..1537536,1537911..1538030,1544006..1544069,1544958..1546575))
location: region:1536378-1546575:-1
so has part: feature:1544958-1546575:-1:exon
so has part: feature:1544006-1544069:-1:exon
so has part: feature:1537911-1538030:-1:exon
so has part: feature:1536378-1537536:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1544958-1546575:-1:exon

position:1544958:-1
position: 1544958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1544006-1544069:-1:exon

position:1544006:-1
position: 1544006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1544069:-1
position: 1544069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1537911-1538030:-1:exon

position:1537911:-1
position: 1537911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1538030:-1
position: 1538030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1536378-1537536:-1:exon

position:1537536:-1
position: 1537536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105869395
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105869395
product: MAP/microtubule affinity-regulating kinase 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012761151.2
SIO_010081: LOC105869395
subclass of: SO_0000673
so part of: LOC105869395
location: complement(join(1536378..1537536,1537911..1538030,1543278..1543390,1544006..1544069,1544958..1546575))
location: region:1536378-1546575:-1
so has part: feature:1544958-1546575:-1:exon
so has part: feature:1544006-1544069:-1:exon
so has part: feature:1543278-1543390:-1:exon
so has part: feature:1537911-1538030:-1:exon
so has part: feature:1536378-1537536:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1544958-1546575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1544006-1544069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543278-1543390:-1:exon

position:1543278:-1
position: 1543278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1543390:-1
position: 1543390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1537911-1538030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1536378-1537536:-1:exon

LOC105869395
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105869395
product: MAP/microtubule affinity-regulating kinase 3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012761153.2
SIO_010081: LOC105869395
subclass of: SO_0000673
so part of: LOC105869395
location: complement(join(1541883..1542514,1543278..1543390,1544006..1544069,1544958..1546575))
location: region:1541883-1546575:-1
so has part: feature:1544958-1546575:-1:exon
so has part: feature:1544006-1544069:-1:exon
so has part: feature:1543278-1543390:-1:exon
so has part: feature:1541883-1542514:-1:exon

position:1541883:-1
position: 1541883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1544958-1546575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1544006-1544069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543278-1543390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1541883-1542514:-1:exon

position:1542514:-1
position: 1542514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105869395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105869395
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP/microtubule affinity-regulating kinase 3-like
translation: MEGTTEASASSLPMEELEKYNILKTIGSGTYGKVMLAEHIPTGTHVALKMIPKKTLPSLENGNLEAEALRALRHPNILKLLDVIEDEHFIWLVTEYARGGDLFWHVARRRGLGEEEARPLFRQLLAAVGHCHEHRIVHRDLKSPNVLLDAHGNVKLADFGFAATFSDEEDLYTFCGTPCFCPPEMFLEEDYRGPEVDVWSLGVLLYFMVAGRIPFDGSSWEELKTTITEGRYETPASFSRELTALLRKILTVDPKLRPALSGLMEDVWVQGQGTPKATASARSLRSRWRSPQVSVAPQRSPEASPSTQSSSLGEETSGDGSVRPGKPHEESATSLSEEEDGQGLKGLARRLGKFLLTYCCILPAEKICRRHRKLNKVVPVSQDS
SIO_010081: LOC105869395
subclass of: SO_0000673
so part of: LOC105869395
location: complement(1544972..1546126)
location: region:1544972-1546126:-1
so has part: feature:1544972-1546126:-1:exon

XP_012616604.1
type: Protein
SIO_000068: ncbiprotein

position:1544972:-1
position: 1544972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1546126:-1
position: 1546126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1544972-1546126:-1:exon

LOC105869395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105869395
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP/microtubule affinity-regulating kinase 3-like
translation: MEGTTEASASSLPMEELEKYNILKTIGSGTYGKVMLAEHIPTGTHVALKMIPKKTLPSLENGNLEAEALRALRHPNILKLLDVIEDEHFIWLVTEYARGGDLFWHVARRRGLGEEEARPLFRQLLAAVGHCHEHRIVHRDLKSPNVLLDAHGNVKLADFGFAATFSDEEDLYTFCGTPCFCPPEMFLEEDYRGPEVDVWSLGVLLYFMVAGRIPFDGSSWEELKTTITEGRYETPASFSRELTALLRKILTVDPKLRPALSGLMEDVWVQGQGTPKATASARSLRSRWRSPQVSVAPQRSPEASPSTQSSSLGEETSGDGSVRPGKPHEESATSLSEEEDGQGLKGLARRLGKFLLTYCCILPAEKICRRHRKLNKVVPVSQDS
SIO_010081: LOC105869395
subclass of: SO_0000673
so part of: LOC105869395
location: complement(1544972..1546126)
location: region:1544972-1546126:-1
so has part: feature:1544972-1546126:-1:exon

XP_012616605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1544972-1546126:-1:exon

LOC105869395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105869395
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP/microtubule affinity-regulating kinase 3-like
translation: MEGTTEASASSLPMEELEKYNILKTIGSGTYGKVMLAEHIPTGTHVALKMIPKKTLPSLENGNLEAEALRALRHPNILKLLDVIEDEHFIWLVTEYARGGDLFWHVARRRGLGEEEARPLFRQLLAAVGHCHEHRIVHRDLKSPNVLLDAHGNVKLADFGFAATFSDEEDLYTFCGTPCFCPPEMFLEEDYRGPEVDVWSLGVLLYFMVAGRIPFDGSSWEELKTTITEGRYETPASFSRELTALLRKILTVDPKLRPALSGLMEDVWVQGQGTPKATASARSLRSRWRSPQVSVAPQRSPEASPSTQSSSLGEETSGDGSVRPGKPHEESATSLSEEEDGQGLKGLARRLGKFLLTYCCILPAEKICRRHRKLNKVVPVSQDS
SIO_010081: LOC105869395
subclass of: SO_0000673
so part of: LOC105869395
location: complement(1544972..1546126)
location: region:1544972-1546126:-1
so has part: feature:1544972-1546126:-1:exon

XP_012616607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1544972-1546126:-1:exon

LOC105869397
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869397
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1561041..1572458)
location: region:1561041-1572458:-1
so has part: feature:1561041-1572458:-1:exon
subclass of: SO_0000010

105869397
type: Gene
SIO_000068: ncbigene

position:1561041:-1
position: 1561041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572458:-1
position: 1572458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1561041-1572458:-1:exon

LOC105869397
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105869397
product: histone-lysine N-methyltransferase SETMAR
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_012761158.2
SIO_010081: LOC105869397
subclass of: SO_0000673
so part of: LOC105869397
location: complement(join(1561041..1561983,1572182..1572458))
location: region:1561041-1572458:-1
so has part: feature:1572182-1572458:-1:exon
so has part: feature:1561041-1561983:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1572182-1572458:-1:exon

position:1572182:-1
position: 1572182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1561041-1561983:-1:exon

position:1561983:-1
position: 1561983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105869397
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105869397
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETMAR
translation: MGQRGRGAHESRQPLRARTGPGSTGRRHVRGAGMFVEAAEKRRPLRMAACEEAPAVPPGQVDVARGLENLPVSAWPPGAGPGPFQYTPDHVRGPGADMDPTQITFPGCICVKTPCLPGTCSCLHYEENYDANSCLRDTGWEAKYAKPVFECNVLCQCGDHCRNRVVQRGLQFHLQVFKTDKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEAQRRIHLQTVCDSNYIIAIREHVYNGQIMETFVDPTYLGNIGRFLNHSCEPNLLMIPVRIDSMVPRLALFAAKDILPEEELSYDYSGRFLNLMDCEDKERLDEGKLRKPCYCGAKSCTAFLPFDSSLYGPLEKPSIN
SIO_010081: LOC105869397
subclass of: SO_0000673
so part of: LOC105869397
location: complement(join(1561195..1561983,1572182..1572436))
location: region:1561195-1572436:-1
so has part: feature:1572182-1572436:-1:exon
so has part: feature:1561195-1561983:-1:exon

XP_012616612.1
type: Protein
SIO_000068: ncbiprotein

position:1561195:-1
position: 1561195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572436:-1
position: 1572436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1572182-1572436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1561195-1561983:-1:exon

LOC105869394
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869394
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1562341..1566349)
location: region:1562341-1566349:-1
so has part: feature:1562341-1566349:-1:exon

105869394
type: Gene
SIO_000068: ncbigene

position:1562341:-1
position: 1562341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1566349:-1
position: 1566349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1562341-1566349:-1:exon

LOC105869394
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105869394
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 23 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105869394
subclass of: SO_0000673
so part of: LOC105869394
location: complement(1562341..1566349)
location: region:1562341-1566349:-1
so has part: feature:1562341-1566349:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1562341-1566349:-1:exon

LRRN1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LRRN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1899427..1933322)
location: region:1899427-1933322:-1
so has part: feature:1899427-1933322:-1:exon
subclass of: SO_0000010

105863912
type: Gene
SIO_000068: ncbigene

position:1899427:-1
position: 1899427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1933322:-1
position: 1933322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1899427-1933322:-1:exon

LRRN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LRRN1
product: leucine rich repeat neuronal 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 110 ESTs, 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012751485.2
SIO_010081: LRRN1
subclass of: SO_0000673
so part of: LRRN1
location: complement(join(1899427..1902674,1932868..1933322))
location: region:1899427-1933322:-1
so has part: feature:1932868-1933322:-1:exon
so has part: feature:1899427-1902674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1932868-1933322:-1:exon

position:1932868:-1
position: 1932868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1899427-1902674:-1:exon

position:1902674:-1
position: 1902674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LRRN1
product: leucine rich repeat neuronal 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 92 ESTs, 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012751494.2
SIO_010081: LRRN1
subclass of: SO_0000673
so part of: LRRN1
location: complement(join(1899427..1902674,1912332..1912383,1932868..1933322))
location: region:1899427-1933322:-1
so has part: feature:1932868-1933322:-1:exon
so has part: feature:1912332-1912383:-1:exon
so has part: feature:1899427-1902674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1932868-1933322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1912332-1912383:-1:exon

position:1912332:-1
position: 1912332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1912383:-1
position: 1912383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1899427-1902674:-1:exon

LRRN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LRRN1
product: leucine rich repeat neuronal 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 90 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012751499.2
SIO_010081: LRRN1
subclass of: SO_0000673
so part of: LRRN1
location: complement(join(1899427..1902674,1906853..1910166))
location: region:1899427-1910166:-1
so has part: feature:1906853-1910166:-1:exon
so has part: feature:1899427-1902674:-1:exon

position:1910166:-1
position: 1910166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1906853-1910166:-1:exon

position:1906853:-1
position: 1906853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1899427-1902674:-1:exon

LRRN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LRRN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 1
translation: MARMSFVVAACRLVLSLLMTSLTESSMQNSECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPSNLSSDTQVLLLQSNNIAKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMTDYCLQDLSNLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFKPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVESLPNLREISIHSNPLRCDCVIHWINSNKTNIRFMEPLSMFCAMPPEYKGQQVKEVLIQDSSEQCLPMISHDTFPNHLNMDIGTTVFLDCRAMAEPEPEIYWVTPIGNKITVETLSDKYKLSSEGTLEISNIQIEDSGRYTCVAQNVQGADTRVATIKVNGTLLDGTQVLKIYVKQAESHSILLSWKVNSNVMTSNLKWSTATVKIDNPHITYTARVPVDVHEYNLTHLQPSTDYEVCLTVSNIHQQTQKSCVNVTTKNAAFALDISDQETSTALAAVMGSMFAVISLASIAVYFAKRFKRKNYHHSLKKYMQKTSSIPLNELYPPLINLWEGDSEKDKDGSADTKPTQVDTSRSYYMW
SIO_010081: LRRN1
subclass of: SO_0000673
so part of: LRRN1
location: complement(1900246..1902396)
location: region:1900246-1902396:-1
so has part: feature:1900246-1902396:-1:exon

XP_012606939.1
type: Protein
SIO_000068: ncbiprotein

position:1900246:-1
position: 1900246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1902396:-1
position: 1902396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1900246-1902396:-1:exon

LRRN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LRRN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 1
translation: MARMSFVVAACRLVLSLLMTSLTESSMQNSECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPSNLSSDTQVLLLQSNNIAKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMTDYCLQDLSNLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFKPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVESLPNLREISIHSNPLRCDCVIHWINSNKTNIRFMEPLSMFCAMPPEYKGQQVKEVLIQDSSEQCLPMISHDTFPNHLNMDIGTTVFLDCRAMAEPEPEIYWVTPIGNKITVETLSDKYKLSSEGTLEISNIQIEDSGRYTCVAQNVQGADTRVATIKVNGTLLDGTQVLKIYVKQAESHSILLSWKVNSNVMTSNLKWSTATVKIDNPHITYTARVPVDVHEYNLTHLQPSTDYEVCLTVSNIHQQTQKSCVNVTTKNAAFALDISDQETSTALAAVMGSMFAVISLASIAVYFAKRFKRKNYHHSLKKYMQKTSSIPLNELYPPLINLWEGDSEKDKDGSADTKPTQVDTSRSYYMW
SIO_010081: LRRN1
subclass of: SO_0000673
so part of: LRRN1
location: complement(1900246..1902396)
location: region:1900246-1902396:-1
so has part: feature:1900246-1902396:-1:exon

XP_012606948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1900246-1902396:-1:exon

LRRN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LRRN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 1
translation: MARMSFVVAACRLVLSLLMTSLTESSMQNSECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPSNLSSDTQVLLLQSNNIAKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMTDYCLQDLSNLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFKPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVESLPNLREISIHSNPLRCDCVIHWINSNKTNIRFMEPLSMFCAMPPEYKGQQVKEVLIQDSSEQCLPMISHDTFPNHLNMDIGTTVFLDCRAMAEPEPEIYWVTPIGNKITVETLSDKYKLSSEGTLEISNIQIEDSGRYTCVAQNVQGADTRVATIKVNGTLLDGTQVLKIYVKQAESHSILLSWKVNSNVMTSNLKWSTATVKIDNPHITYTARVPVDVHEYNLTHLQPSTDYEVCLTVSNIHQQTQKSCVNVTTKNAAFALDISDQETSTALAAVMGSMFAVISLASIAVYFAKRFKRKNYHHSLKKYMQKTSSIPLNELYPPLINLWEGDSEKDKDGSADTKPTQVDTSRSYYMW
SIO_010081: LRRN1
subclass of: SO_0000673
so part of: LRRN1
location: complement(1900246..1902396)
location: region:1900246-1902396:-1
so has part: feature:1900246-1902396:-1:exon

XP_012606953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1900246-1902396:-1:exon

CRBN
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: CRBN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2517511..2544091
location: region:2517511-2544091:1
so has part: feature:2517511-2544091:1:exon
subclass of: SO_0000010

105867613
type: Gene
SIO_000068: ncbigene

position:2517511:1
position: 2517511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2544091:1
position: 2544091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2517511-2544091:1:exon

CRBN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CRBN
product: cereblon
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 303 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_020284270.1
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(2517511..2517607,2521911..2522023,2522636..2522838,2523677..2523826,2528670..2528829,2539131..2539193,2540192..2540276,2540890..2541005,2541511..2541575,2542431..2542562,2543423..2544091)
location: region:2517511-2544091:1
so has part: feature:2517511-2517607:1:exon
so has part: feature:2521911-2522023:1:exon
so has part: feature:2522636-2522838:1:exon
so has part: feature:2523677-2523826:1:exon
so has part: feature:2528670-2528829:1:exon
so has part: feature:2539131-2539193:1:exon
so has part: feature:2540192-2540276:1:exon
so has part: feature:2540890-2541005:1:exon
so has part: feature:2541511-2541575:1:exon
so has part: feature:2542431-2542562:1:exon
so has part: feature:2543423-2544091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2517511-2517607:1:exon

position:2517607:1
position: 2517607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2521911-2522023:1:exon

position:2521911:1
position: 2521911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2522023:1
position: 2522023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2522636-2522838:1:exon

position:2522636:1
position: 2522636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2522838:1
position: 2522838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2523677-2523826:1:exon

position:2523677:1
position: 2523677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2523826:1
position: 2523826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2528670-2528829:1:exon

position:2528670:1
position: 2528670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2528829:1
position: 2528829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2539131-2539193:1:exon

position:2539131:1
position: 2539131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2539193:1
position: 2539193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2540192-2540276:1:exon

position:2540192:1
position: 2540192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2540276:1
position: 2540276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2540890-2541005:1:exon

position:2540890:1
position: 2540890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2541005:1
position: 2541005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2541511-2541575:1:exon

position:2541511:1
position: 2541511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2541575:1
position: 2541575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2542431-2542562:1:exon

position:2542431:1
position: 2542431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2542562:1
position: 2542562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2543423-2544091:1:exon

position:2543423:1
position: 2543423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRBN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CRBN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein cereblon
translation: MAGEGDPQDAAHNMGNHLPLLPAENEEEDEIEMEVEDQDSKEAKKPNVINFDTSLPTSHTYLGSDMEEFHGRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFSPQEVSMVRNLIQKDRTFAVLAYSNIQEREAQFGTTAEIYAYREEQDFGIEIVKVKAVGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSAVQLESLNKCQIFPSKPVSWEDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSNPIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITTKNEIFSLSLCGPMAAYVNPHGYVHETLTVYKACNLNLIGRPSTEHSWFPGYAWTIAQCRICASHIGWKFTATKKDMSPQKFWGLTRSALLPTIPDTEDEISPDKVILCL
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(2517541..2517607,2521911..2522023,2522636..2522838,2523677..2523826,2528670..2528829,2539131..2539193,2540192..2540276,2540890..2541005,2541511..2541575,2542431..2542562,2543423..2543603)
location: region:2517541-2543603:1
so has part: feature:2517541-2517607:1:exon
so has part: feature:2521911-2522023:1:exon
so has part: feature:2522636-2522838:1:exon
so has part: feature:2523677-2523826:1:exon
so has part: feature:2528670-2528829:1:exon
so has part: feature:2539131-2539193:1:exon
so has part: feature:2540192-2540276:1:exon
so has part: feature:2540890-2541005:1:exon
so has part: feature:2541511-2541575:1:exon
so has part: feature:2542431-2542562:1:exon
so has part: feature:2543423-2543603:1:exon

XP_020139859.1
type: Protein
SIO_000068: ncbiprotein

position:2517541:1
position: 2517541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2543603:1
position: 2543603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2517541-2517607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2521911-2522023:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2522636-2522838:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2523677-2523826:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2528670-2528829:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2539131-2539193:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2540192-2540276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2540890-2541005:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2541511-2541575:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2542431-2542562:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2543423-2543603:1:exon

TRNT1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TRNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2541747..2566175)
location: region:2541747-2566175:-1
so has part: feature:2541747-2566175:-1:exon
subclass of: SO_0000010

105867615
type: Gene
SIO_000068: ncbigene

position:2541747:-1
position: 2541747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2566175:-1
position: 2566175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2541747-2566175:-1:exon

TRNT1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: TRNT1
product: tRNA nucleotidyl transferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 77 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_002222721.1
SIO_010081: TRNT1
so part of: TRNT1
location: complement(join(2541747..2542640,2544802..2545899,2546092..2546345,2547497..2547690,2549025..2549151,2553326..2553464,2557818..2558011,2564853..2565027,2565527..2565860))
location: region:2541747-2565860:-1
so has part: feature:2565527-2565860:-1:exon
so has part: feature:2564853-2565027:-1:exon
so has part: feature:2557818-2558011:-1:exon
so has part: feature:2553326-2553464:-1:exon
so has part: feature:2549025-2549151:-1:exon
so has part: feature:2547497-2547690:-1:exon
so has part: feature:2546092-2546345:-1:exon
so has part: feature:2544802-2545899:-1:exon
so has part: feature:2541747-2542640:-1:exon

position:2565860:-1
position: 2565860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2565527-2565860:-1:exon

position:2565527:-1
position: 2565527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2564853-2565027:-1:exon

position:2564853:-1
position: 2564853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2565027:-1
position: 2565027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2557818-2558011:-1:exon

position:2557818:-1
position: 2557818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2558011:-1
position: 2558011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2553326-2553464:-1:exon

position:2553326:-1
position: 2553326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2553464:-1
position: 2553464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2549025-2549151:-1:exon

position:2549025:-1
position: 2549025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2549151:-1
position: 2549151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2547497-2547690:-1:exon

position:2547497:-1
position: 2547497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2547690:-1
position: 2547690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2546092-2546345:-1:exon

position:2546092:-1
position: 2546092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2546345:-1
position: 2546345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2544802-2545899:-1:exon

position:2544802:-1
position: 2544802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2545899:-1
position: 2545899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2541747-2542640:-1:exon

position:2542640:-1
position: 2542640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TRNT1
product: tRNA nucleotidyl transferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 77 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012757868.2
SIO_010081: TRNT1
subclass of: SO_0000673
so part of: TRNT1
location: complement(join(2544800..2545899,2546092..2546345,2547497..2547690,2549025..2549151,2553326..2553464,2557818..2558011,2564853..2565027,2565876..2566175))
location: region:2544800-2566175:-1
so has part: feature:2565876-2566175:-1:exon
so has part: feature:2564853-2565027:-1:exon
so has part: feature:2557818-2558011:-1:exon
so has part: feature:2553326-2553464:-1:exon
so has part: feature:2549025-2549151:-1:exon
so has part: feature:2547497-2547690:-1:exon
so has part: feature:2546092-2546345:-1:exon
so has part: feature:2544800-2545899:-1:exon

position:2544800:-1
position: 2544800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2565876-2566175:-1:exon

position:2565876:-1
position: 2565876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2564853-2565027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2557818-2558011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2553326-2553464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2549025-2549151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2547497-2547690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2546092-2546345:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2544800-2545899:-1:exon

TRNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TRNT1
product: tRNA nucleotidyl transferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 75 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012757869.1
SIO_010081: TRNT1
subclass of: SO_0000673
so part of: TRNT1
location: complement(join(2544800..2544971,2545619..2545899,2546092..2546345,2547497..2547690,2549025..2549151,2553326..2553464,2557818..2558011,2564853..2565027,2565527..2565860))
location: region:2544800-2565860:-1
so has part: feature:2565527-2565860:-1:exon
so has part: feature:2564853-2565027:-1:exon
so has part: feature:2557818-2558011:-1:exon
so has part: feature:2553326-2553464:-1:exon
so has part: feature:2549025-2549151:-1:exon
so has part: feature:2547497-2547690:-1:exon
so has part: feature:2546092-2546345:-1:exon
so has part: feature:2545619-2545899:-1:exon
so has part: feature:2544800-2544971:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2565527-2565860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2564853-2565027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2557818-2558011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2553326-2553464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2549025-2549151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2547497-2547690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2546092-2546345:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2545619-2545899:-1:exon

position:2545619:-1
position: 2545619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2544800-2544971:-1:exon

position:2544971:-1
position: 2544971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TRNT1
product: tRNA nucleotidyl transferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 77 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012757867.1
SIO_010081: TRNT1
subclass of: SO_0000673
so part of: TRNT1
location: complement(join(2544800..2545899,2546092..2546345,2547497..2547690,2549025..2549151,2553326..2553464,2557818..2558011,2564853..2565027,2565527..2565860))
location: region:2544800-2565860:-1
so has part: feature:2565527-2565860:-1:exon
so has part: feature:2564853-2565027:-1:exon
so has part: feature:2557818-2558011:-1:exon
so has part: feature:2553326-2553464:-1:exon
so has part: feature:2549025-2549151:-1:exon
so has part: feature:2547497-2547690:-1:exon
so has part: feature:2546092-2546345:-1:exon
so has part: feature:2544800-2545899:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2565527-2565860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2564853-2565027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2557818-2558011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2553326-2553464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2549025-2549151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2547497-2547690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2546092-2546345:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2544800-2545899:-1:exon

TRNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TRNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCA tRNA nucleotidyltransferase 1, mitochondrial
translation: MLRHLYPWHRPVPSCSWSRLSLLKRYLFTMKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDVDFATTATPAQMKEMFQSAGIRMINNKGEKHGTITARLHEENFEITTLRIDVLTDGRHAEVEFTTDWQKDAERRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVTFVGHAKQRIQEDYLRILRYFRFYGKIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILIGNHVNHLIHLMYDLDVAPYIGLPANASLEEFNRVCKNVEGFSPKPMTLLASLFKVQDDVTKLDLRLKISKEEKNLGLFIVKNRKDLIKATDSSEPLKPYQDFIIDSREPDASARVCELLKYQGERSLLKEMEQWSVPPFPVSGHDIRKAGISSGKEIGALLQQLREQWKKSGYQMEKDELLSYIKKN
SIO_010081: TRNT1
subclass of: SO_0000673
so part of: TRNT1
location: complement(join(2545651..2545899,2546092..2546345,2547497..2547690,2549025..2549151,2553326..2553464,2557818..2558011,2564853..2565000))
location: region:2545651-2565000:-1
so has part: feature:2564853-2565000:-1:exon
so has part: feature:2557818-2558011:-1:exon
so has part: feature:2553326-2553464:-1:exon
so has part: feature:2549025-2549151:-1:exon
so has part: feature:2547497-2547690:-1:exon
so has part: feature:2546092-2546345:-1:exon
so has part: feature:2545651-2545899:-1:exon

XP_012613321.1
type: Protein
SIO_000068: ncbiprotein

position:2545651:-1
position: 2545651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2565000:-1
position: 2565000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2564853-2565000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557818-2558011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2553326-2553464:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2549025-2549151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2547497-2547690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2546092-2546345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2545651-2545899:-1:exon

TRNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TRNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCA tRNA nucleotidyltransferase 1, mitochondrial
translation: MLRHLYPWHRPVPSCSWSRLSLLKRYLFTMKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDVDFATTATPAQMKEMFQSAGIRMINNKGEKHGTITARLHEENFEITTLRIDVLTDGRHAEVEFTTDWQKDAERRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVTFVGHAKQRIQEDYLRILRYFRFYGKIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILIGNHVNHLIHLMYDLDVAPYIGLPANASLEEFNRVCKNVEGFSPKPMTLLASLFKVQDDVTKLDLRLKISKEEKNLGLFIVKNRKDLIKATDSSEPLKPYQDFIIDSREPDASARVCELLKYQGERSLLKEMEQWSVPPFPVSGHDIRKAGISSGKEIGALLQQLREQWKKSGYQMEKDELLSYIKKN
SIO_010081: TRNT1
subclass of: SO_0000673
so part of: TRNT1
location: complement(join(2545651..2545899,2546092..2546345,2547497..2547690,2549025..2549151,2553326..2553464,2557818..2558011,2564853..2565000))
location: region:2545651-2565000:-1
so has part: feature:2564853-2565000:-1:exon
so has part: feature:2557818-2558011:-1:exon
so has part: feature:2553326-2553464:-1:exon
so has part: feature:2549025-2549151:-1:exon
so has part: feature:2547497-2547690:-1:exon
so has part: feature:2546092-2546345:-1:exon
so has part: feature:2545651-2545899:-1:exon

XP_012613322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2564853-2565000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557818-2558011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2553326-2553464:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2549025-2549151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2547497-2547690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2546092-2546345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2545651-2545899:-1:exon

TRNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TRNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCA tRNA nucleotidyltransferase 1, mitochondrial
translation: MLRHLYPWHRPVPSCSWSRLSLLKRYLFTMKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDVDFATTATPAQMKEMFQSAGIRMINNKGEKHGTITARLHEENFEITTLRIDVLTDGRHAEVEFTTDWQKDAERRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVTFVGHAKQRIQEDYLRILRYFRFYGKIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILIGNHVNHLIHLMYDLDVAPYIGLPANASLEEFNRVCKNVEGFSPKPMTLLASLFKVQDDVTKLDLRLKISKEEKNLGLFIVKNRKDLIKATDSSEPLKPYQDFIIDSREPDASARVCELLKYQGERSLLKEMEQWSVPPFPVSGHDIRKAGISSGKEIGALLQQLREQWKKSGYQMEKDELLSYIKKN
SIO_010081: TRNT1
subclass of: SO_0000673
so part of: TRNT1
location: complement(join(2545651..2545899,2546092..2546345,2547497..2547690,2549025..2549151,2553326..2553464,2557818..2558011,2564853..2565000))
location: region:2545651-2565000:-1
so has part: feature:2564853-2565000:-1:exon
so has part: feature:2557818-2558011:-1:exon
so has part: feature:2553326-2553464:-1:exon
so has part: feature:2549025-2549151:-1:exon
so has part: feature:2547497-2547690:-1:exon
so has part: feature:2546092-2546345:-1:exon
so has part: feature:2545651-2545899:-1:exon

XP_012613323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2564853-2565000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557818-2558011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2553326-2553464:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2549025-2549151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2547497-2547690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2546092-2546345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2545651-2545899:-1:exon

IL5RA
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: IL5RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2566432..2622226
location: region:2566432-2622226:1
so has part: feature:2566432-2622226:1:exon
subclass of: SO_0000010

105867616
type: Gene
SIO_000068: ncbigene

position:2566432:1
position: 2566432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2622226:1
position: 2622226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2566432-2622226:1:exon

IL5RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: IL5RA
product: interleukin 5 receptor subunit alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012757872.2
SIO_010081: IL5RA
subclass of: SO_0000673
so part of: IL5RA
location: join(2566432..2566469,2582048..2582170,2585801..2585885,2587449..2587594,2588716..2588854,2590787..2590940,2591021..2591208,2594057..2594202,2598563..2598701,2615856..2615952,2617348..2617432,2621522..2622226)
location: region:2566432-2622226:1
so has part: feature:2566432-2566469:1:exon
so has part: feature:2582048-2582170:1:exon
so has part: feature:2585801-2585885:1:exon
so has part: feature:2587449-2587594:1:exon
so has part: feature:2588716-2588854:1:exon
so has part: feature:2590787-2590940:1:exon
so has part: feature:2591021-2591208:1:exon
so has part: feature:2594057-2594202:1:exon
so has part: feature:2598563-2598701:1:exon
so has part: feature:2615856-2615952:1:exon
so has part: feature:2617348-2617432:1:exon
so has part: feature:2621522-2622226:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2566432-2566469:1:exon

position:2566469:1
position: 2566469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2582048-2582170:1:exon

position:2582048:1
position: 2582048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2582170:1
position: 2582170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2585801-2585885:1:exon

position:2585801:1
position: 2585801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2585885:1
position: 2585885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2587449-2587594:1:exon

position:2587449:1
position: 2587449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2587594:1
position: 2587594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2588716-2588854:1:exon

position:2588716:1
position: 2588716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2588854:1
position: 2588854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2590787-2590940:1:exon

position:2590787:1
position: 2590787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2590940:1
position: 2590940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2591021-2591208:1:exon

position:2591021:1
position: 2591021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2591208:1
position: 2591208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2594057-2594202:1:exon

position:2594057:1
position: 2594057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2594202:1
position: 2594202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2598563-2598701:1:exon

position:2598563:1
position: 2598563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2598701:1
position: 2598701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2615856-2615952:1:exon

position:2615856:1
position: 2615856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2615952:1
position: 2615952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2617348-2617432:1:exon

position:2617348:1
position: 2617348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2617432:1
position: 2617432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2621522-2622226:1:exon

position:2621522:1
position: 2621522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL5RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: IL5RA
product: interleukin 5 receptor subunit alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284271.1
SIO_010081: IL5RA
subclass of: SO_0000673
so part of: IL5RA
location: join(2566432..2566469,2582048..2582170,2585801..2585885,2587449..2587594,2588716..2588854,2590787..2590940,2591021..2591208,2594057..2594202,2598563..2598738,2611431..2611559)
location: region:2566432-2611559:1
so has part: feature:2566432-2566469:1:exon
so has part: feature:2582048-2582170:1:exon
so has part: feature:2585801-2585885:1:exon
so has part: feature:2587449-2587594:1:exon
so has part: feature:2588716-2588854:1:exon
so has part: feature:2590787-2590940:1:exon
so has part: feature:2591021-2591208:1:exon
so has part: feature:2594057-2594202:1:exon
so has part: feature:2598563-2598738:1:exon
so has part: feature:2611431-2611559:1:exon

position:2611559:1
position: 2611559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2566432-2566469:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2582048-2582170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2585801-2585885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587449-2587594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2588716-2588854:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590787-2590940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2591021-2591208:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594057-2594202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2598563-2598738:1:exon

position:2598738:1
position: 2598738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2611431-2611559:1:exon

position:2611431:1
position: 2611431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL5RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: IL5RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-5 receptor subunit alpha isoform X2
translation: MITMVPVLLILSGAVAILQAELLPAEKFLLLPPVNFTIKVTGLAQVLLHWEPNPDQKPRNVNLEYHVKINAPQDDDYETRNTESKCVTILHRGFSASVQTILWHGPSLLASSWVSAELKAPPGSPGTSVVNLTCTTNTAADNGSSLWPYQVSLRCTWLVGQDAPEDTQYFLYYRYGSRTEECQEYSKDALKRNIACWFPRTFIQGKGRDWLAVHVNGSSKHAAIEPFDQLFALHAIDQVNPPLNVTAEIEGTHLSIQWEKPVSAFPTHCFDYEVKIYNIRKGYFQTEKVTTRAFVSIVDDASKYCVQVRAAVSATCRAAGTWSRWSRPLYVGTDEQKPLARWFLVVLMAAACFLLLTSSLLCRGCRLWSRLFPPVPAPKSNIQDFLVTTNHEKAGSTETETEVVSYVEEAAFETLEDSVF
SIO_010081: IL5RA
subclass of: SO_0000673
so part of: IL5RA
location: join(2585804..2585885,2587449..2587594,2588716..2588854,2590787..2590940,2591021..2591208,2594057..2594202,2598563..2598701,2615856..2615952,2617348..2617432,2621522..2621608)
location: region:2585804-2621608:1
so has part: feature:2585804-2585885:1:exon
so has part: feature:2587449-2587594:1:exon
so has part: feature:2588716-2588854:1:exon
so has part: feature:2590787-2590940:1:exon
so has part: feature:2591021-2591208:1:exon
so has part: feature:2594057-2594202:1:exon
so has part: feature:2598563-2598701:1:exon
so has part: feature:2615856-2615952:1:exon
so has part: feature:2617348-2617432:1:exon
so has part: feature:2621522-2621608:1:exon

XP_012613326.1
type: Protein
SIO_000068: ncbiprotein

position:2585804:1
position: 2585804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2621608:1
position: 2621608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585804-2585885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2587449-2587594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2588716-2588854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2590787-2590940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2591021-2591208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2594057-2594202:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2598563-2598701:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2615856-2615952:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2617348-2617432:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2621522-2621608:1:exon

IL5RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: IL5RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-5 receptor subunit alpha isoform X1
translation: MITMVPVLLILSGAVAILQAELLPAEKFLLLPPVNFTIKVTGLAQVLLHWEPNPDQKPRNVNLEYHVKINAPQDDDYETRNTESKCVTILHRGFSASVQTILWHGPSLLASSWVSAELKAPPGSPGTSVVNLTCTTNTAADNGSSLWPYQVSLRCTWLVGQDAPEDTQYFLYYRYGSRTEECQEYSKDALKRNIACWFPRTFIQGKGRDWLAVHVNGSSKHAAIEPFDQLFALHAIDQVNPPLNVTAEIEGTHLSIQWEKPVSAFPTHCFDYEVKIYNIRKGYFQTEKVTTRAFVSIVDDASKYCVQVRAAVSATCRAAGTWSRWSRPLYVGEWLTPEPSPLRGENLGSSKRELQRVTREWFN
SIO_010081: IL5RA
subclass of: SO_0000673
so part of: IL5RA
location: join(2585804..2585885,2587449..2587594,2588716..2588854,2590787..2590940,2591021..2591208,2594057..2594202,2598563..2598738,2611431..2611491)
location: region:2585804-2611491:1
so has part: feature:2585804-2585885:1:exon
so has part: feature:2587449-2587594:1:exon
so has part: feature:2588716-2588854:1:exon
so has part: feature:2590787-2590940:1:exon
so has part: feature:2591021-2591208:1:exon
so has part: feature:2594057-2594202:1:exon
so has part: feature:2598563-2598738:1:exon
so has part: feature:2611431-2611491:1:exon

XP_020139860.1
type: Protein
SIO_000068: ncbiprotein

position:2611491:1
position: 2611491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585804-2585885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2587449-2587594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2588716-2588854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2590787-2590940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2591021-2591208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2594057-2594202:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2598563-2598738:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2611431-2611491:1:exon

CNTN4
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: CNTN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2633453..2864408)
location: region:2633453-2864408:-1
so has part: feature:2633453-2864408:-1:exon
subclass of: SO_0000010

105867618
type: Gene
SIO_000068: ncbigene

position:2633453:-1
position: 2633453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2864408:-1
position: 2864408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2633453-2864408:-1:exon

CNTN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CNTN4
product: contactin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 53 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012757873.1
SIO_010081: CNTN4
subclass of: SO_0000673
so part of: CNTN4
location: complement(join(2633453..2635296,2638461..2638629,2647552..2647664,2648097..2648283,2648829..2648941,2650949..2651183,2652850..2652920,2654490..2654639,2656132..2656290,2660977..2661094,2666096..2666271,2702558..2702685,2759275..2759425,2789973..2790102,2791984..2792120,2804537..2804721,2807996..2808098,2822967..2823164,2864319..2864408))
location: region:2633453-2864408:-1
so has part: feature:2864319-2864408:-1:exon
so has part: feature:2822967-2823164:-1:exon
so has part: feature:2807996-2808098:-1:exon
so has part: feature:2804537-2804721:-1:exon
so has part: feature:2791984-2792120:-1:exon
so has part: feature:2789973-2790102:-1:exon
so has part: feature:2759275-2759425:-1:exon
so has part: feature:2702558-2702685:-1:exon
so has part: feature:2666096-2666271:-1:exon
so has part: feature:2660977-2661094:-1:exon
so has part: feature:2656132-2656290:-1:exon
so has part: feature:2654490-2654639:-1:exon
so has part: feature:2652850-2652920:-1:exon
so has part: feature:2650949-2651183:-1:exon
so has part: feature:2648829-2648941:-1:exon
so has part: feature:2648097-2648283:-1:exon
so has part: feature:2647552-2647664:-1:exon
so has part: feature:2638461-2638629:-1:exon
so has part: feature:2633453-2635296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2864319-2864408:-1:exon

position:2864319:-1
position: 2864319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2822967-2823164:-1:exon

position:2822967:-1
position: 2822967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2823164:-1
position: 2823164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2807996-2808098:-1:exon

position:2807996:-1
position: 2807996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2808098:-1
position: 2808098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2804537-2804721:-1:exon

position:2804537:-1
position: 2804537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2804721:-1
position: 2804721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2791984-2792120:-1:exon

position:2791984:-1
position: 2791984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2792120:-1
position: 2792120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2789973-2790102:-1:exon

position:2789973:-1
position: 2789973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2790102:-1
position: 2790102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2759275-2759425:-1:exon

position:2759275:-1
position: 2759275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2759425:-1
position: 2759425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2702558-2702685:-1:exon

position:2702558:-1
position: 2702558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2702685:-1
position: 2702685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2666096-2666271:-1:exon

position:2666096:-1
position: 2666096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2666271:-1
position: 2666271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2660977-2661094:-1:exon

position:2660977:-1
position: 2660977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2661094:-1
position: 2661094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2656132-2656290:-1:exon

position:2656132:-1
position: 2656132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2656290:-1
position: 2656290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2654490-2654639:-1:exon

position:2654490:-1
position: 2654490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2654639:-1
position: 2654639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2652850-2652920:-1:exon

position:2652850:-1
position: 2652850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2652920:-1
position: 2652920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2650949-2651183:-1:exon

position:2650949:-1
position: 2650949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2651183:-1
position: 2651183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2648829-2648941:-1:exon

position:2648829:-1
position: 2648829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2648941:-1
position: 2648941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2648097-2648283:-1:exon

position:2648097:-1
position: 2648097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2648283:-1
position: 2648283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2647552-2647664:-1:exon

position:2647552:-1
position: 2647552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2647664:-1
position: 2647664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2638461-2638629:-1:exon

position:2638461:-1
position: 2638461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2638629:-1
position: 2638629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2633453-2635296:-1:exon

position:2635296:-1
position: 2635296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNTN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CNTN4
product: contactin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 55 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_020284272.1
SIO_010081: CNTN4
subclass of: SO_0000673
so part of: CNTN4
location: complement(join(2633453..2635296,2638461..2638629,2647552..2647664,2648097..2648283,2648829..2648941,2650949..2651183,2652850..2652920,2654490..2654639,2656132..2656290,2660977..2661097,2666096..2666271,2702558..2702685,2759275..2759425,2789973..2790102,2791984..2792120,2804537..2804721,2807996..2808098,2822967..2823164,2864319..2864408))
location: region:2633453-2864408:-1
so has part: feature:2864319-2864408:-1:exon
so has part: feature:2822967-2823164:-1:exon
so has part: feature:2807996-2808098:-1:exon
so has part: feature:2804537-2804721:-1:exon
so has part: feature:2791984-2792120:-1:exon
so has part: feature:2789973-2790102:-1:exon
so has part: feature:2759275-2759425:-1:exon
so has part: feature:2702558-2702685:-1:exon
so has part: feature:2666096-2666271:-1:exon
so has part: feature:2660977-2661097:-1:exon
so has part: feature:2656132-2656290:-1:exon
so has part: feature:2654490-2654639:-1:exon
so has part: feature:2652850-2652920:-1:exon
so has part: feature:2650949-2651183:-1:exon
so has part: feature:2648829-2648941:-1:exon
so has part: feature:2648097-2648283:-1:exon
so has part: feature:2647552-2647664:-1:exon
so has part: feature:2638461-2638629:-1:exon
so has part: feature:2633453-2635296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2864319-2864408:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2822967-2823164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2807996-2808098:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2804537-2804721:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791984-2792120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2789973-2790102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2759275-2759425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2702558-2702685:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2666096-2666271:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2660977-2661097:-1:exon

position:2661097:-1
position: 2661097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2656132-2656290:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2654490-2654639:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2652850-2652920:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2650949-2651183:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2648829-2648941:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2648097-2648283:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2647552-2647664:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2638461-2638629:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2633453-2635296:-1:exon

CNTN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CNTN4
product: contactin 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 53 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012757874.2
SIO_010081: CNTN4
subclass of: SO_0000673
so part of: CNTN4
location: complement(join(2633453..2635296,2638461..2638629,2647552..2647664,2648097..2648283,2648829..2648941,2650949..2651183,2652850..2652920,2654490..2654639,2656132..2656290,2660977..2661097,2666096..2666271,2702558..2702685,2759275..2759425,2789973..2790102,2791984..2792120,2804537..2804721,2807996..2808098,2822967..2823164,2837817..2840561))
location: region:2633453-2840561:-1
so has part: feature:2837817-2840561:-1:exon
so has part: feature:2822967-2823164:-1:exon
so has part: feature:2807996-2808098:-1:exon
so has part: feature:2804537-2804721:-1:exon
so has part: feature:2791984-2792120:-1:exon
so has part: feature:2789973-2790102:-1:exon
so has part: feature:2759275-2759425:-1:exon
so has part: feature:2702558-2702685:-1:exon
so has part: feature:2666096-2666271:-1:exon
so has part: feature:2660977-2661097:-1:exon
so has part: feature:2656132-2656290:-1:exon
so has part: feature:2654490-2654639:-1:exon
so has part: feature:2652850-2652920:-1:exon
so has part: feature:2650949-2651183:-1:exon
so has part: feature:2648829-2648941:-1:exon
so has part: feature:2648097-2648283:-1:exon
so has part: feature:2647552-2647664:-1:exon
so has part: feature:2638461-2638629:-1:exon
so has part: feature:2633453-2635296:-1:exon

position:2840561:-1
position: 2840561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2837817-2840561:-1:exon

position:2837817:-1
position: 2837817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2822967-2823164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2807996-2808098:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2804537-2804721:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791984-2792120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2789973-2790102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2759275-2759425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2702558-2702685:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2666096-2666271:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2660977-2661097:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2656132-2656290:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2654490-2654639:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2652850-2652920:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2650949-2651183:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2648829-2648941:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2648097-2648283:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2647552-2647664:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2638461-2638629:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2633453-2635296:-1:exon

CNTN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CNTN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-4 isoform X2
translation: MVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAAGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILRENERITVSEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGRLIDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGRYVCMVQTSVDKLSATADLTVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTVPELIDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMSWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPATVVYSAEEEPTKPPASIFARSLSATDIEVFWASPLEKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSATVNVTTRKPPPSQPPGNIIWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNKTSVELSLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGASTSNACTLSAISTIMISLTARSSL
SIO_010081: CNTN4
subclass of: SO_0000673
so part of: CNTN4
location: complement(join(2635196..2635296,2638461..2638629,2647552..2647664,2648097..2648283,2648829..2648941,2650949..2651183,2652850..2652920,2654490..2654639,2656132..2656290,2660977..2661094,2666096..2666271,2702558..2702685,2759275..2759425,2789973..2790102,2791984..2792120,2804537..2804721,2807996..2808098,2822967..2823164,2864319..2864355))
location: region:2635196-2864355:-1
so has part: feature:2864319-2864355:-1:exon
so has part: feature:2822967-2823164:-1:exon
so has part: feature:2807996-2808098:-1:exon
so has part: feature:2804537-2804721:-1:exon
so has part: feature:2791984-2792120:-1:exon
so has part: feature:2789973-2790102:-1:exon
so has part: feature:2759275-2759425:-1:exon
so has part: feature:2702558-2702685:-1:exon
so has part: feature:2666096-2666271:-1:exon
so has part: feature:2660977-2661094:-1:exon
so has part: feature:2656132-2656290:-1:exon
so has part: feature:2654490-2654639:-1:exon
so has part: feature:2652850-2652920:-1:exon
so has part: feature:2650949-2651183:-1:exon
so has part: feature:2648829-2648941:-1:exon
so has part: feature:2648097-2648283:-1:exon
so has part: feature:2647552-2647664:-1:exon
so has part: feature:2638461-2638629:-1:exon
so has part: feature:2635196-2635296:-1:exon

XP_012613327.1
type: Protein
SIO_000068: ncbiprotein

position:2635196:-1
position: 2635196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2864355:-1
position: 2864355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2864319-2864355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2822967-2823164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2807996-2808098:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2804537-2804721:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791984-2792120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2789973-2790102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2759275-2759425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2702558-2702685:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2666096-2666271:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2660977-2661094:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2656132-2656290:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2654490-2654639:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2652850-2652920:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2650949-2651183:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2648829-2648941:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2648097-2648283:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2647552-2647664:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2638461-2638629:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2635196-2635296:-1:exon

CNTN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CNTN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-4 isoform X1
translation: MVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAAGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILRENERITVSEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGRLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGRYVCMVQTSVDKLSATADLTVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTVPELIDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMSWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPATVVYSAEEEPTKPPASIFARSLSATDIEVFWASPLEKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSATVNVTTRKPPPSQPPGNIIWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNKTSVELSLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGASTSNACTLSAISTIMISLTARSSL
SIO_010081: CNTN4
subclass of: SO_0000673
so part of: CNTN4
location: complement(join(2635196..2635296,2638461..2638629,2647552..2647664,2648097..2648283,2648829..2648941,2650949..2651183,2652850..2652920,2654490..2654639,2656132..2656290,2660977..2661097,2666096..2666271,2702558..2702685,2759275..2759425,2789973..2790102,2791984..2792120,2804537..2804721,2807996..2808098,2822967..2823164,2864319..2864355))
location: region:2635196-2864355:-1
so has part: feature:2864319-2864355:-1:exon
so has part: feature:2822967-2823164:-1:exon
so has part: feature:2807996-2808098:-1:exon
so has part: feature:2804537-2804721:-1:exon
so has part: feature:2791984-2792120:-1:exon
so has part: feature:2789973-2790102:-1:exon
so has part: feature:2759275-2759425:-1:exon
so has part: feature:2702558-2702685:-1:exon
so has part: feature:2666096-2666271:-1:exon
so has part: feature:2660977-2661097:-1:exon
so has part: feature:2656132-2656290:-1:exon
so has part: feature:2654490-2654639:-1:exon
so has part: feature:2652850-2652920:-1:exon
so has part: feature:2650949-2651183:-1:exon
so has part: feature:2648829-2648941:-1:exon
so has part: feature:2648097-2648283:-1:exon
so has part: feature:2647552-2647664:-1:exon
so has part: feature:2638461-2638629:-1:exon
so has part: feature:2635196-2635296:-1:exon

XP_020139861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2864319-2864355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2822967-2823164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2807996-2808098:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2804537-2804721:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791984-2792120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2789973-2790102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2759275-2759425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2702558-2702685:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2666096-2666271:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2660977-2661097:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2656132-2656290:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2654490-2654639:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2652850-2652920:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2650949-2651183:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2648829-2648941:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2648097-2648283:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2647552-2647664:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2638461-2638629:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2635196-2635296:-1:exon

CNTN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CNTN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-4 isoform X3
translation: MGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAAGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILRENERITVSEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGRLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGRYVCMVQTSVDKLSATADLTVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTVPELIDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMSWMLTVLASADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPATVVYSAEEEPTKPPASIFARSLSATDIEVFWASPLEKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSATVNVTTRKPPPSQPPGNIIWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNKTSVELSLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGASTSNACTLSAISTIMISLTARSSL
SIO_010081: CNTN4
subclass of: SO_0000673
so part of: CNTN4
location: complement(join(2635196..2635296,2638461..2638629,2647552..2647664,2648097..2648283,2648829..2648941,2650949..2651183,2652850..2652920,2654490..2654639,2656132..2656290,2660977..2661097,2666096..2666271,2702558..2702685,2759275..2759425,2789973..2790102,2791984..2792120,2804537..2804721,2807996..2808093))
location: region:2635196-2808093:-1
so has part: feature:2807996-2808093:-1:exon
so has part: feature:2804537-2804721:-1:exon
so has part: feature:2791984-2792120:-1:exon
so has part: feature:2789973-2790102:-1:exon
so has part: feature:2759275-2759425:-1:exon
so has part: feature:2702558-2702685:-1:exon
so has part: feature:2666096-2666271:-1:exon
so has part: feature:2660977-2661097:-1:exon
so has part: feature:2656132-2656290:-1:exon
so has part: feature:2654490-2654639:-1:exon
so has part: feature:2652850-2652920:-1:exon
so has part: feature:2650949-2651183:-1:exon
so has part: feature:2648829-2648941:-1:exon
so has part: feature:2648097-2648283:-1:exon
so has part: feature:2647552-2647664:-1:exon
so has part: feature:2638461-2638629:-1:exon
so has part: feature:2635196-2635296:-1:exon

XP_012613328.1
type: Protein
SIO_000068: ncbiprotein

position:2808093:-1
position: 2808093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2807996-2808093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2804537-2804721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2791984-2792120:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2789973-2790102:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2759275-2759425:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2702558-2702685:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2666096-2666271:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2660977-2661097:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2656132-2656290:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2654490-2654639:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2652850-2652920:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2650949-2651183:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2648829-2648941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2648097-2648283:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2647552-2647664:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2638461-2638629:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2635196-2635296:-1:exon

LOC105867612
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105867612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2705200..2706016
location: region:2705200-2706016:1
so has part: feature:2705200-2706016:1:exon

105867612
type: Gene
SIO_000068: ncbigene

position:2705200:1
position: 2705200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2706016:1
position: 2706016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2705200-2706016:1:exon

LOC105867612
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105867612
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC105867612
subclass of: SO_0000673
so part of: LOC105867612
location: 2705200..2705215
location: region:2705200-2705215:1
so has part: feature:2705200-2705215:1:exon

position:2705215:1
position: 2705215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2705200-2705215:1:exon

LOC105867612
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105867612
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC105867612
subclass of: SO_0000673
so part of: LOC105867612
location: 2705655..2706016
location: region:2705655-2706016:1
so has part: feature:2705655-2706016:1:exon

position:2705655:1
position: 2705655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2705655-2706016:1:exon

LOC105869401
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869401
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2975673..2979439
location: region:2975673-2979439:1
so has part: feature:2975673-2979439:1:exon
subclass of: SO_0000011

105869401
type: Gene
SIO_000068: ncbigene

position:2975673:1
position: 2975673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2979439:1
position: 2979439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2975673-2979439:1:exon

LOC105869401
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869401
product: uncharacterized LOC105869401, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222724.1
SIO_010081: LOC105869401
subclass of: SO_0000673
so part of: LOC105869401
location: join(2975673..2977171,2977422..2977562,2978926..2979439)
location: region:2975673-2979439:1
so has part: feature:2975673-2977171:1:exon
so has part: feature:2977422-2977562:1:exon
so has part: feature:2978926-2979439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2975673-2977171:1:exon

position:2977171:1
position: 2977171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2977422-2977562:1:exon

position:2977422:1
position: 2977422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2977562:1
position: 2977562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2978926-2979439:1:exon

position:2978926:1
position: 2978926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105869401
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869401
product: uncharacterized LOC105869401, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001153170.1
SIO_010081: LOC105869401
subclass of: SO_0000673
so part of: LOC105869401
location: join(2975673..2977171,2977422..2977562,2977679..2977920)
location: region:2975673-2977920:1
so has part: feature:2975673-2977171:1:exon
so has part: feature:2977422-2977562:1:exon
so has part: feature:2977679-2977920:1:exon

position:2977920:1
position: 2977920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2975673-2977171:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2977422-2977562:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2977679-2977920:1:exon

position:2977679:1
position: 2977679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105869400
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3166053..3177254
location: region:3166053-3177254:1
so has part: feature:3166053-3177254:1:exon
subclass of: SO_0000011

105869400
type: Gene
SIO_000068: ncbigene

position:3166053:1
position: 3166053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3177254:1
position: 3177254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3166053-3177254:1:exon

LOC105869400
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869400
product: uncharacterized LOC105869400
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001153169.1
SIO_010081: LOC105869400
subclass of: SO_0000673
so part of: LOC105869400
location: join(3166053..3167786,3171306..3171452,3172010..3177254)
location: region:3166053-3177254:1
so has part: feature:3166053-3167786:1:exon
so has part: feature:3171306-3171452:1:exon
so has part: feature:3172010-3177254:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3166053-3167786:1:exon

position:3167786:1
position: 3167786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3171306-3171452:1:exon

position:3171306:1
position: 3171306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3171452:1
position: 3171452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3172010-3177254:1:exon

position:3172010:1
position: 3172010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRM7
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: GRM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3943449..4748453
location: region:3943449-4748453:1
so has part: feature:3943449-4748453:1:exon
subclass of: SO_0000010

105869387
type: Gene
SIO_000068: ncbigene

position:3943449:1
position: 3943449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4748453:1
position: 4748453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943449-4748453:1:exon

GRM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 22 ESTs, 50 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012761143.1
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943449..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4713883..4713974,4747237..4748453)
location: region:3943449-4748453:1
so has part: feature:3943449-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4713883-4713974:1:exon
so has part: feature:4747237-4748453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3943449-3944203:1:exon

position:3944203:1
position: 3944203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

position:4190675:1
position: 4190675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4190891:1
position: 4190891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

position:4365889:1
position: 4365889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4366030:1
position: 4366030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

position:4374596:1
position: 4374596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4374750:1
position: 4374750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

position:4446652:1
position: 4446652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4446792:1
position: 4446792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

position:4487384:1
position: 4487384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4487584:1
position: 4487584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

position:4494547:1
position: 4494547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4494686:1
position: 4494686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

position:4582604:1
position: 4582604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4583539:1
position: 4583539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

position:4706930:1
position: 4706930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4707176:1
position: 4707176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4713883-4713974:1:exon

position:4713883:1
position: 4713883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4713974:1
position: 4713974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4747237-4748453:1:exon

position:4747237:1
position: 4747237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 22 ESTs, 46 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012761145.1
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943449..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4747237..4748453)
location: region:3943449-4748453:1
so has part: feature:3943449-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4747237-4748453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3943449-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4747237-4748453:1:exon

GRM7
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 50 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_001153146.1
SIO_010081: GRM7
so part of: GRM7
location: join(3943604..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4713883..4718567,4718674..4718703)
location: region:3943604-4718703:1
so has part: feature:3943604-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4713883-4718567:1:exon
so has part: feature:4718674-4718703:1:exon

position:3943604:1
position: 3943604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4718703:1
position: 4718703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943604-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4713883-4718567:1:exon

position:4718567:1
position: 4718567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4718674-4718703:1:exon

position:4718674:1
position: 4718674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRM7
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 50 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001153147.1
SIO_010081: GRM7
so part of: GRM7
location: join(3943604..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4713883..4713974,4716788..4718567,4718674..4718703)
location: region:3943604-4718703:1
so has part: feature:3943604-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4713883-4713974:1:exon
so has part: feature:4716788-4718567:1:exon
so has part: feature:4718674-4718703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3943604-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4713883-4713974:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4716788-4718567:1:exon

position:4716788:1
position: 4716788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4718674-4718703:1:exon

GRM7
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 50 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001153148.1
SIO_010081: GRM7
so part of: GRM7
location: join(3943604..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4713883..4717438,4718498..4718567,4718674..4718687)
location: region:3943604-4718687:1
so has part: feature:3943604-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4713883-4717438:1:exon
so has part: feature:4718498-4718567:1:exon
so has part: feature:4718674-4718687:1:exon

position:4718687:1
position: 4718687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943604-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4713883-4717438:1:exon

position:4717438:1
position: 4717438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4718498-4718567:1:exon

position:4718498:1
position: 4718498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4718674-4718687:1:exon

GRM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 50 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012761144.1
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943604..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4713883..4713974,4718498..4718559)
location: region:3943604-4718559:1
so has part: feature:3943604-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4713883-4713974:1:exon
so has part: feature:4718498-4718559:1:exon

position:4718559:1
position: 4718559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943604-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4713883-4713974:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4718498-4718559:1:exon

GRM7
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001153144.1
SIO_010081: GRM7
so part of: GRM7
location: join(3943618..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4721618..4721679,4722329..4723338,4747237..4748453)
location: region:3943618-4748453:1
so has part: feature:3943618-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4721618-4721679:1:exon
so has part: feature:4722329-4723338:1:exon
so has part: feature:4747237-4748453:1:exon

position:3943618:1
position: 3943618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943618-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4721618-4721679:1:exon

position:4721618:1
position: 4721618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4721679:1
position: 4721679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4722329-4723338:1:exon

position:4722329:1
position: 4722329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4723338:1
position: 4723338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4747237-4748453:1:exon

GRM7
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001153145.2
SIO_010081: GRM7
so part of: GRM7
location: join(3943618..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4721618..4721679,4722329..4723338,4724772..4725298)
location: region:3943618-4725298:1
so has part: feature:3943618-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4721618-4721679:1:exon
so has part: feature:4722329-4723338:1:exon
so has part: feature:4724772-4725298:1:exon

position:4725298:1
position: 4725298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943618-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4721618-4721679:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4722329-4723338:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4724772-4725298:1:exon

position:4724772:1
position: 4724772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012761141.2
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943618..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4721618..4721679,4722329..4723656)
location: region:3943618-4723656:1
so has part: feature:3943618-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4721618-4721679:1:exon
so has part: feature:4722329-4723656:1:exon

position:4723656:1
position: 4723656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943618-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4721618-4721679:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4722329-4723656:1:exon

GRM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284224.1
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943618..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4718498..4718567,4718674..4718798,4721618..4721680)
location: region:3943618-4721680:1
so has part: feature:3943618-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4718498-4718567:1:exon
so has part: feature:4718674-4718798:1:exon
so has part: feature:4721618-4721680:1:exon

position:4721680:1
position: 4721680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943618-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4718498-4718567:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4718674-4718798:1:exon

position:4718798:1
position: 4718798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4721618-4721680:1:exon

GRM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284225.1
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943618..3944203,4190675..4190855,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4718498..4718567,4718674..4718798,4721618..4721680)
location: region:3943618-4721680:1
so has part: feature:3943618-3944203:1:exon
so has part: feature:4190675-4190855:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4718498-4718567:1:exon
so has part: feature:4718674-4718798:1:exon
so has part: feature:4721618-4721680:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3943618-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190855:1:exon

position:4190855:1
position: 4190855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4718498-4718567:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4718674-4718798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4721618-4721680:1:exon

GRM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012761146.2
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943618..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4688345..4688860)
location: region:3943618-4688860:1
so has part: feature:3943618-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4688345-4688860:1:exon

position:4688860:1
position: 4688860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943618-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4688345-4688860:1:exon

position:4688345:1
position: 4688345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012761147.2
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943618..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4611410..4611872)
location: region:3943618-4611872:1
so has part: feature:3943618-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4611410-4611872:1:exon

position:4611872:1
position: 4611872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943618-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4611410-4611872:1:exon

position:4611410:1
position: 4611410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GRM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 7 isoform X5
translation: MAQLGKPLRALTSLKSPCCVLEVLLCALAAAARGQEMYAPHSIRIEGDVTLGGLFPVHAKGPSGVPCGDIKRESGIHRLEAMLYALDQINSDPNLLPNVTLGARILDTCSRDTHALEQSLAFVQALIQKDTSDVRCTNGEPPVFVRPEKVVGVIGASGSSVSIMVANILRLFQIPQISYASTAPELSDDRRYDFFSRVVPPDSFQAQAMVDIVKALGWNYVSTLASEGSYGEKGVESFTQISKEAGGLCIAQSVRIPQERRDRTIDFDRIIKQLLDTPNSRAIVIFANDEDIKQILAAAKRADQVGHFLWVGSDSWGSKINPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNVWFAEYWEENFNCKLTISGSKKEDTDRKCTGQERIGKDSNYEQEGKVQFVIDAVYAMAHALHHMNKDLCADYRGVCPEMEQAGGKKLLKYIRNVNFNGSAGTPVMFNKNGDAPGRYDIFQYQATNTTSPGYRLIGQWTDELQLNIEDMQWGKGVREIPASVCTRPCKPGQRKKTQKGTPCCWTCEPCDGYQYQFDEVTCQHCPYDQRPNENRTGCQDIPIIKLEWHSPWAVIPVFLAMLGIVATLFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAIASSLISVQLLGVFIWFGVDPPNIVVDYDEHKTMSPEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYIQTTTLTVSMNLSASVALGMLYMPKVYVIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKPSDRPNGEAKTELCENVDPNSPAAKKKYVSYNNLVI
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943685..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4747237..4747286)
location: region:3943685-4747286:1
so has part: feature:3943685-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4747237-4747286:1:exon

XP_012616599.1
type: Protein
SIO_000068: ncbiprotein

position:3943685:1
position: 3943685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4747286:1
position: 4747286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943685-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4747237-4747286:1:exon

GRM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GRM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 7 isoform X3
translation: MAQLGKPLRALTSLKSPCCVLEVLLCALAAAARGQEMYAPHSIRIEGDVTLGGLFPVHAKGPSGVPCGDIKRESGIHRLEAMLYALDQINSDPNLLPNVTLGARILDTCSRDTHALEQSLAFVQALIQKDTSDVRCTNGEPPVFVRPEKVVGVIGASGSSVSIMVANILRLFQIPQISYASTAPELSDDRRYDFFSRVVPPDSFQAQAMVDIVKALGWNYVSTLASEGSYGEKGVESFTQISKEAGGLCIAQSVRIPQERRDRTIDFDRIIKQLLDTPNSRAIVIFANDEDIKQILAAAKRADQVGHFLWVGSDSWGSKINPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNVWFAEYWEENFNCKLTISGSKKEDTDRKCTGQERIGKDSNYEQEGKVQFVIDAVYAMAHALHHMNKDLCADYRGVCPEMEQAGGKKLLKYIRNVNFNGSAGTPVMFNKNGDAPGRYDIFQYQATNTTSPGYRLIGQWTDELQLNIEDMQWGKGVREIPASVCTRPCKPGQRKKTQKGTPCCWTCEPCDGYQYQFDEVTCQHCPYDQRPNENRTGCQDIPIIKLEWHSPWAVIPVFLAMLGIVATLFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAIASSLISVQLLGVFIWFGVDPPNIVVDYDEHKTMSPEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYIQTTTLTVSMNLSASVALGMLYMPKVYVIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKPSDRPNGEAKTELCENVDPNSEESATAADPRGWHLVKQLSQERMLAIPM
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943685..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4721618..4721679,4722329..4722355)
location: region:3943685-4722355:1
so has part: feature:3943685-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4721618-4721679:1:exon
so has part: feature:4722329-4722355:1:exon

XP_012616595.1
type: Protein
SIO_000068: ncbiprotein

position:4722355:1
position: 4722355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943685-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4721618-4721679:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4722329-4722355:1:exon

GRM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GRM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 7 isoform X1
translation: MAQLGKPLRALTSLKSPCCVLEVLLCALAAAARGQEMYAPHSIRIEGDVTLGGLFPVHAKGPSGVPCGDIKRESGIHRLEAMLYALDQINSDPNLLPNVTLGARILDTCSRDTHALEQSLAFVQALIQKDTSDVRCTNGEPPVFVRPEKVVGVIGASGSSVSIMVANILRLFQIPQISYASTAPELSDDRRYDFFSRVVPPDSFQAQAMVDIVKALGWNYVSTLASEGSYGEKGVESFTQISKEAGGLCIAQSVRIPQERRDRTIDFDRIIKQLLDTPNSRAIVIFANDEDIKQILAAAKRADQVGHFLWVGSDSWGSKINPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNVWFAEYWEENFNCKLTISGSKKEDTDRKCTGQERIGKDSNYEQEGKVQFVIDAVYAMAHALHHMNKDLCADYRGVCPEMEQAGGKKLLKYIRNVNFNGSAGTPVMFNKNGDAPGRYDIFQYQATNTTSPGYRLIGQWTDELQLNIEDMQWGKGVREIPASVCTRPCKPGQRKKTQKGTPCCWTCEPCDGYQYQFDEVTCQHCPYDQRPNENRTGCQDIPIIKLEWHSPWAVIPVFLAMLGIVATLFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAIASSLISVQLLGVFIWFGVDPPNIVVDYDEHKTMSPEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYIQTTTLTVSMNLSASVALGMLYMPKVYVIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKPSDRPNGEAKTELCENVDPNNICPLWLYSGTWIHFQLTFSRNQRVSSEDPQLVRGGLRKHLQCLLCAG
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943685..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4718498..4718567,4718674..4718749)
location: region:3943685-4718749:1
so has part: feature:3943685-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4718498-4718567:1:exon
so has part: feature:4718674-4718749:1:exon

XP_020139813.1
type: Protein
SIO_000068: ncbiprotein

position:4718749:1
position: 4718749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943685-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4718498-4718567:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4718674-4718749:1:exon

GRM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GRM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 7 isoform X2
translation: MAQLGKPLRALTSLKSPCCVLEVLLCALAAAARGQEMYAPHSIRIEGDVTLGGLFPVHAKGPSGVPCGDIKRESGIHRLEAMLYALDQINSDPNLLPNVTLGARILDTCSRDTHALEQSLAFVQALIQKDTSDVRCTNGEPPVFVRPEKVVGVIGASGSSVSIMVANILRLFQIPQISYASTAPELSDDRRYDFFSRVVPPDSFQAQAMVDIVKALGWNYVSTLASEGSYGEKGGLCIAQSVRIPQERRDRTIDFDRIIKQLLDTPNSRAIVIFANDEDIKQILAAAKRADQVGHFLWVGSDSWGSKINPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNVWFAEYWEENFNCKLTISGSKKEDTDRKCTGQERIGKDSNYEQEGKVQFVIDAVYAMAHALHHMNKDLCADYRGVCPEMEQAGGKKLLKYIRNVNFNGSAGTPVMFNKNGDAPGRYDIFQYQATNTTSPGYRLIGQWTDELQLNIEDMQWGKGVREIPASVCTRPCKPGQRKKTQKGTPCCWTCEPCDGYQYQFDEVTCQHCPYDQRPNENRTGCQDIPIIKLEWHSPWAVIPVFLAMLGIVATLFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAIASSLISVQLLGVFIWFGVDPPNIVVDYDEHKTMSPEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYIQTTTLTVSMNLSASVALGMLYMPKVYVIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKPSDRPNGEAKTELCENVDPNNICPLWLYSGTWIHFQLTFSRNQRVSSEDPQLVRGGLRKHLQCLLCAG
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943685..3944203,4190675..4190855,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4718498..4718567,4718674..4718749)
location: region:3943685-4718749:1
so has part: feature:3943685-3944203:1:exon
so has part: feature:4190675-4190855:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4718498-4718567:1:exon
so has part: feature:4718674-4718749:1:exon

XP_020139814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3943685-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190855:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4718498-4718567:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4718674-4718749:1:exon

GRM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GRM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 7 isoform X4
translation: MAQLGKPLRALTSLKSPCCVLEVLLCALAAAARGQEMYAPHSIRIEGDVTLGGLFPVHAKGPSGVPCGDIKRESGIHRLEAMLYALDQINSDPNLLPNVTLGARILDTCSRDTHALEQSLAFVQALIQKDTSDVRCTNGEPPVFVRPEKVVGVIGASGSSVSIMVANILRLFQIPQISYASTAPELSDDRRYDFFSRVVPPDSFQAQAMVDIVKALGWNYVSTLASEGSYGEKGVESFTQISKEAGGLCIAQSVRIPQERRDRTIDFDRIIKQLLDTPNSRAIVIFANDEDIKQILAAAKRADQVGHFLWVGSDSWGSKINPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNVWFAEYWEENFNCKLTISGSKKEDTDRKCTGQERIGKDSNYEQEGKVQFVIDAVYAMAHALHHMNKDLCADYRGVCPEMEQAGGKKLLKYIRNVNFNGSAGTPVMFNKNGDAPGRYDIFQYQATNTTSPGYRLIGQWTDELQLNIEDMQWGKGVREIPASVCTRPCKPGQRKKTQKGTPCCWTCEPCDGYQYQFDEVTCQHCPYDQRPNENRTGCQDIPIIKLEWHSPWAVIPVFLAMLGIVATLFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAIASSLISVQLLGVFIWFGVDPPNIVVDYDEHKTMSPEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYIQTTTLTVSMNLSASVALGMLYMPKVYVIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKPSDRPNGEAKTELCENVDPNNCIPPVRKSVQKSVTWYTIPPTV
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943685..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4713883..4713953)
location: region:3943685-4713953:1
so has part: feature:3943685-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4713883-4713953:1:exon

XP_012616597.1
type: Protein
SIO_000068: ncbiprotein

position:4713953:1
position: 4713953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943685-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4713883-4713953:1:exon

GRM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GRM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 7 isoform X4
translation: MAQLGKPLRALTSLKSPCCVLEVLLCALAAAARGQEMYAPHSIRIEGDVTLGGLFPVHAKGPSGVPCGDIKRESGIHRLEAMLYALDQINSDPNLLPNVTLGARILDTCSRDTHALEQSLAFVQALIQKDTSDVRCTNGEPPVFVRPEKVVGVIGASGSSVSIMVANILRLFQIPQISYASTAPELSDDRRYDFFSRVVPPDSFQAQAMVDIVKALGWNYVSTLASEGSYGEKGVESFTQISKEAGGLCIAQSVRIPQERRDRTIDFDRIIKQLLDTPNSRAIVIFANDEDIKQILAAAKRADQVGHFLWVGSDSWGSKINPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNVWFAEYWEENFNCKLTISGSKKEDTDRKCTGQERIGKDSNYEQEGKVQFVIDAVYAMAHALHHMNKDLCADYRGVCPEMEQAGGKKLLKYIRNVNFNGSAGTPVMFNKNGDAPGRYDIFQYQATNTTSPGYRLIGQWTDELQLNIEDMQWGKGVREIPASVCTRPCKPGQRKKTQKGTPCCWTCEPCDGYQYQFDEVTCQHCPYDQRPNENRTGCQDIPIIKLEWHSPWAVIPVFLAMLGIVATLFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAIASSLISVQLLGVFIWFGVDPPNIVVDYDEHKTMSPEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYIQTTTLTVSMNLSASVALGMLYMPKVYVIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKPSDRPNGEAKTELCENVDPNNCIPPVRKSVQKSVTWYTIPPTV
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943685..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4713883..4713953)
location: region:3943685-4713953:1
so has part: feature:3943685-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4713883-4713953:1:exon

XP_012616598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3943685-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4713883-4713953:1:exon

GRM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GRM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 7 isoform X6
translation: MAQLGKPLRALTSLKSPCCVLEVLLCALAAAARGQEMYAPHSIRIEGDVTLGGLFPVHAKGPSGVPCGDIKRESGIHRLEAMLYALDQINSDPNLLPNVTLGARILDTCSRDTHALEQSLAFVQALIQKDTSDVRCTNGEPPVFVRPEKVVGVIGASGSSVSIMVANILRLFQIPQISYASTAPELSDDRRYDFFSRVVPPDSFQAQAMVDIVKALGWNYVSTLASEGSYGEKGVESFTQISKEAGGLCIAQSVRIPQERRDRTIDFDRIIKQLLDTPNSRAIVIFANDEDIKQILAAAKRADQVGHFLWVGSDSWGSKINPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNVWFAEYWEENFNCKLTISGSKKEDTDRKCTGQERIGKDSNYEQEGKVQFVIDAVYAMAHALHHMNKDLCADYRGVCPEMEQAGGKKLLKYIRNVNFNGSAGTPVMFNKNGDAPGRYDIFQYQATNTTSPGYRLIGQWTDELQLNIEDMQWGKGVREIPASVCTRPCKPGQRKKTQKGTPCCWTCEPCDGYQYQFDEVTCQHCPYDQRPNENRTGCQDIPIIKLEWHSPWAVIPVFLAMLGIVATLFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAIASSLISVQLLGVFIWFGVDPPNIVVDYDEHKTMSPEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKFTGSHARDGGNRVWETRRLPGEMLMVPSTLCKWCWVLG
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943685..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4688345..4688461)
location: region:3943685-4688461:1
so has part: feature:3943685-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4688345-4688461:1:exon

XP_012616600.1
type: Protein
SIO_000068: ncbiprotein

position:4688461:1
position: 4688461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943685-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4688345-4688461:1:exon

GRM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GRM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 7 isoform X7
translation: MAQLGKPLRALTSLKSPCCVLEVLLCALAAAARGQEMYAPHSIRIEGDVTLGGLFPVHAKGPSGVPCGDIKRESGIHRLEAMLYALDQINSDPNLLPNVTLGARILDTCSRDTHALEQSLAFVQALIQKDTSDVRCTNGEPPVFVRPEKVVGVIGASGSSVSIMVANILRLFQIPQISYASTAPELSDDRRYDFFSRVVPPDSFQAQAMVDIVKALGWNYVSTLASEGSYGEKGVESFTQISKEAGGLCIAQSVRIPQERRDRTIDFDRIIKQLLDTPNSRAIVIFANDEDIKQILAAAKRADQVGHFLWVGSDSWGSKINPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNVWFAEYWEENFNCKLTISGSKKEDTDRKCTGQERIGKDSNYEQEGKVQFVIDAVYAMAHALHHMNKDLCADYRGVCPEMEQAGGKKLLKYIRNVNFNGSAGTPVMFNKNGDAPGRYDIFQYQATNTTSPGYRLIGQWTDELQLNIEDMQWGKGVREIPASVCTRPCKPGQRKKTQKGTPCCWTCEPCDGYQYQFDEVTCQHCPYDQRPNENRTGCQDIPIIKLEWHSPWAVIPVFLAMLGIVATLFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAIASSLISVQLLGVFIWFGVDPPNIVVDYDEHKTMSPEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKIPTPTSERRDAISPPEETIHISPVLSPASRL
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(3943685..3944203,4190675..4190891,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4611410..4611505)
location: region:3943685-4611505:1
so has part: feature:3943685-3944203:1:exon
so has part: feature:4190675-4190891:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4611410-4611505:1:exon

XP_012616601.1
type: Protein
SIO_000068: ncbiprotein

position:4611505:1
position: 4611505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943685-3944203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190675-4190891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4611410-4611505:1:exon

LOC105869388
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4257879..4264823
location: region:4257879-4264823:1
so has part: feature:4257879-4264823:1:exon

105869388
type: Gene
SIO_000068: ncbigene

position:4257879:1
position: 4257879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4264823:1
position: 4264823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4257879-4264823:1:exon

LOC105869388
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105869388
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105869388
subclass of: SO_0000673
so part of: LOC105869388
location: 4257879..4264823
location: region:4257879-4264823:1
so has part: feature:4257879-4264823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4257879-4264823:1:exon

GRM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284226.1
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(4321645..4322044,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4718498..4718567,4718674..4718798,4721618..4721680)
location: region:4321645-4721680:1
so has part: feature:4321645-4322044:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4718498-4718567:1:exon
so has part: feature:4718674-4718798:1:exon
so has part: feature:4721618-4721680:1:exon

position:4321645:1
position: 4321645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4321645-4322044:1:exon

position:4322044:1
position: 4322044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4718498-4718567:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4718674-4718798:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4721618-4721680:1:exon

GRM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GRM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 7 isoform X8
translation: MPLCPLETEPQARPSPTAHTSLEVFAHTRPLPPPARLATDVTPVSAGVRVRSHRLAVRTPELGLPSWDARLSSVGSGSSREHRGGLCIAQSVRIPQERRDRTIDFDRIIKQLLDTPNSRAIVIFANDEDIKQILAAAKRADQVGHFLWVGSDSWGSKINPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNVWFAEYWEENFNCKLTISGSKKEDTDRKCTGQERIGKDSNYEQEGKVQFVIDAVYAMAHALHHMNKDLCADYRGVCPEMEQAGGKKLLKYIRNVNFNGSAGTPVMFNKNGDAPGRYDIFQYQATNTTSPGYRLIGQWTDELQLNIEDMQWGKGVREIPASVCTRPCKPGQRKKTQKGTPCCWTCEPCDGYQYQFDEVTCQHCPYDQRPNENRTGCQDIPIIKLEWHSPWAVIPVFLAMLGIVATLFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAIASSLISVQLLGVFIWFGVDPPNIVVDYDEHKTMSPEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYIQTTTLTVSMNLSASVALGMLYMPKVYVIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKPSDRPNGEAKTELCENVDPNNICPLWLYSGTWIHFQLTFSRNQRVSSEDPQLVRGGLRKHLQCLLCAG
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(4321795..4322044,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4718498..4718567,4718674..4718749)
location: region:4321795-4718749:1
so has part: feature:4321795-4322044:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4718498-4718567:1:exon
so has part: feature:4718674-4718749:1:exon

XP_020139815.1
type: Protein
SIO_000068: ncbiprotein

position:4321795:1
position: 4321795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4321795-4322044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4718498-4718567:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4718674-4718749:1:exon

GRM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284227.1
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(4356775..4357131,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4718498..4718567,4718674..4718798,4721618..4721680)
location: region:4356775-4721680:1
so has part: feature:4356775-4357131:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4718498-4718567:1:exon
so has part: feature:4718674-4718798:1:exon
so has part: feature:4721618-4721680:1:exon

position:4356775:1
position: 4356775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4356775-4357131:1:exon

position:4357131:1
position: 4357131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4718498-4718567:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4718674-4718798:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4721618-4721680:1:exon

GRM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GRM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 7 isoform X9
translation: MGACKPFSCPAGREQSETLGRLPDSSRLPRLPRARDSTRQARPFPASSRALGAGTRAVCLTSSLCGLCIAQSVRIPQERRDRTIDFDRIIKQLLDTPNSRAIVIFANDEDIKQILAAAKRADQVGHFLWVGSDSWGSKINPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNVWFAEYWEENFNCKLTISGSKKEDTDRKCTGQERIGKDSNYEQEGKVQFVIDAVYAMAHALHHMNKDLCADYRGVCPEMEQAGGKKLLKYIRNVNFNGSAGTPVMFNKNGDAPGRYDIFQYQATNTTSPGYRLIGQWTDELQLNIEDMQWGKGVREIPASVCTRPCKPGQRKKTQKGTPCCWTCEPCDGYQYQFDEVTCQHCPYDQRPNENRTGCQDIPIIKLEWHSPWAVIPVFLAMLGIVATLFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAIASSLISVQLLGVFIWFGVDPPNIVVDYDEHKTMSPEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYIQTTTLTVSMNLSASVALGMLYMPKVYVIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKPSDRPNGEAKTELCENVDPNNICPLWLYSGTWIHFQLTFSRNQRVSSEDPQLVRGGLRKHLQCLLCAG
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: join(4356939..4357131,4365889..4366030,4374596..4374750,4446652..4446792,4487384..4487584,4494547..4494686,4582604..4583539,4706930..4707176,4718498..4718567,4718674..4718749)
location: region:4356939-4718749:1
so has part: feature:4356939-4357131:1:exon
so has part: feature:4365889-4366030:1:exon
so has part: feature:4374596-4374750:1:exon
so has part: feature:4446652-4446792:1:exon
so has part: feature:4487384-4487584:1:exon
so has part: feature:4494547-4494686:1:exon
so has part: feature:4582604-4583539:1:exon
so has part: feature:4706930-4707176:1:exon
so has part: feature:4718498-4718567:1:exon
so has part: feature:4718674-4718749:1:exon

XP_020139816.1
type: Protein
SIO_000068: ncbiprotein

position:4356939:1
position: 4356939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4356939-4357131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4365889-4366030:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4374596-4374750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4446652-4446792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4487384-4487584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4494547-4494686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4582604-4583539:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4706930-4707176:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4718498-4718567:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4718674-4718749:1:exon

LOC105869389
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869389
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4672220..4686729)
location: region:4672220-4686729:-1
so has part: feature:4672220-4686729:-1:exon
subclass of: SO_0000011

105869389
type: Gene
SIO_000068: ncbigene

position:4672220:-1
position: 4672220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4686729:-1
position: 4686729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4672220-4686729:-1:exon

LOC105869389
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869389
product: uncharacterized LOC105869389, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222700.1
SIO_010081: LOC105869389
subclass of: SO_0000673
so part of: LOC105869389
location: complement(join(4672220..4676180,4676320..4676386,4677351..4677454,4677563..4677705,4678228..4678349,4681462..4682110,4683623..4686729))
location: region:4672220-4686729:-1
so has part: feature:4683623-4686729:-1:exon
so has part: feature:4681462-4682110:-1:exon
so has part: feature:4678228-4678349:-1:exon
so has part: feature:4677563-4677705:-1:exon
so has part: feature:4677351-4677454:-1:exon
so has part: feature:4676320-4676386:-1:exon
so has part: feature:4672220-4676180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4683623-4686729:-1:exon

position:4683623:-1
position: 4683623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4681462-4682110:-1:exon

position:4681462:-1
position: 4681462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4682110:-1
position: 4682110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4678228-4678349:-1:exon

position:4678228:-1
position: 4678228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4678349:-1
position: 4678349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4677563-4677705:-1:exon

position:4677563:-1
position: 4677563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4677705:-1
position: 4677705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4677351-4677454:-1:exon

position:4677351:-1
position: 4677351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4677454:-1
position: 4677454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4676320-4676386:-1:exon

position:4676320:-1
position: 4676320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4676386:-1
position: 4676386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4672220-4676180:-1:exon

position:4676180:-1
position: 4676180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105869389
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869389
product: uncharacterized LOC105869389, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222699.1
SIO_010081: LOC105869389
subclass of: SO_0000673
so part of: LOC105869389
location: complement(join(4672220..4676180,4677351..4677454,4677563..4677705,4678228..4678349,4681462..4686729))
location: region:4672220-4686729:-1
so has part: feature:4681462-4686729:-1:exon
so has part: feature:4678228-4678349:-1:exon
so has part: feature:4677563-4677705:-1:exon
so has part: feature:4677351-4677454:-1:exon
so has part: feature:4672220-4676180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4681462-4686729:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4678228-4678349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4677563-4677705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4677351-4677454:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4672220-4676180:-1:exon

LOC105869389
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869389
product: uncharacterized LOC105869389, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222702.1
SIO_010081: LOC105869389
subclass of: SO_0000673
so part of: LOC105869389
location: complement(join(4672220..4675715,4676007..4676180,4676320..4676386,4677351..4677454,4677563..4677705,4678228..4678349,4681462..4686729))
location: region:4672220-4686729:-1
so has part: feature:4681462-4686729:-1:exon
so has part: feature:4678228-4678349:-1:exon
so has part: feature:4677563-4677705:-1:exon
so has part: feature:4677351-4677454:-1:exon
so has part: feature:4676320-4676386:-1:exon
so has part: feature:4676007-4676180:-1:exon
so has part: feature:4672220-4675715:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4681462-4686729:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4678228-4678349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4677563-4677705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4677351-4677454:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4676320-4676386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4676007-4676180:-1:exon

position:4676007:-1
position: 4676007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4672220-4675715:-1:exon

position:4675715:-1
position: 4675715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105869389
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869389
product: uncharacterized LOC105869389, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001153156.2
SIO_010081: LOC105869389
subclass of: SO_0000673
so part of: LOC105869389
location: complement(join(4672220..4676180,4676320..4676386,4677351..4677454,4677563..4677705,4678228..4678349,4681462..4686729))
location: region:4672220-4686729:-1
so has part: feature:4681462-4686729:-1:exon
so has part: feature:4678228-4678349:-1:exon
so has part: feature:4677563-4677705:-1:exon
so has part: feature:4677351-4677454:-1:exon
so has part: feature:4676320-4676386:-1:exon
so has part: feature:4672220-4676180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4681462-4686729:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4678228-4678349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4677563-4677705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4677351-4677454:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4676320-4676386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4672220-4676180:-1:exon

LOC105869389
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869389
product: uncharacterized LOC105869389, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222701.1
SIO_010081: LOC105869389
subclass of: SO_0000673
so part of: LOC105869389
location: complement(join(4672220..4676180,4676320..4676386,4677351..4677454,4677563..4677705,4678224..4678349,4681462..4686729))
location: region:4672220-4686729:-1
so has part: feature:4681462-4686729:-1:exon
so has part: feature:4678224-4678349:-1:exon
so has part: feature:4677563-4677705:-1:exon
so has part: feature:4677351-4677454:-1:exon
so has part: feature:4676320-4676386:-1:exon
so has part: feature:4672220-4676180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4681462-4686729:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4678224-4678349:-1:exon

position:4678224:-1
position: 4678224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4677563-4677705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4677351-4677454:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4676320-4676386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4672220-4676180:-1:exon

LOC105869390
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869390
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4689088..4691996)
location: region:4689088-4691996:-1
so has part: feature:4689088-4691996:-1:exon
subclass of: SO_0000011

105869390
type: Gene
SIO_000068: ncbigene

position:4689088:-1
position: 4689088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4691996:-1
position: 4691996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4689088-4691996:-1:exon

LOC105869390
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869390
product: uncharacterized LOC105869390, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001153161.2
SIO_010081: LOC105869390
subclass of: SO_0000673
so part of: LOC105869390
location: complement(join(4689088..4689173,4690634..4690703,4690943..4691996))
location: region:4689088-4691996:-1
so has part: feature:4690943-4691996:-1:exon
so has part: feature:4690634-4690703:-1:exon
so has part: feature:4689088-4689173:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4690943-4691996:-1:exon

position:4690943:-1
position: 4690943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4690634-4690703:-1:exon

position:4690634:-1
position: 4690634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4690703:-1
position: 4690703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4689088-4689173:-1:exon

position:4689173:-1
position: 4689173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105869390
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869390
product: uncharacterized LOC105869390, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001153160.2
SIO_010081: LOC105869390
subclass of: SO_0000673
so part of: LOC105869390
location: complement(join(4689092..4689169,4690634..4690703,4690943..4691994))
location: region:4689092-4691994:-1
so has part: feature:4690943-4691994:-1:exon
so has part: feature:4690634-4690703:-1:exon
so has part: feature:4689092-4689169:-1:exon

position:4689092:-1
position: 4689092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4691994:-1
position: 4691994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4690943-4691994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4690634-4690703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4689092-4689169:-1:exon

position:4689169:-1
position: 4689169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105869385
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5040642..5045103)
location: region:5040642-5045103:-1
so has part: feature:5040642-5045103:-1:exon
subclass of: SO_0000011

105869385
type: Gene
SIO_000068: ncbigene

position:5040642:-1
position: 5040642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5045103:-1
position: 5045103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5040642-5045103:-1:exon

LOC105869385
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869385
product: uncharacterized LOC105869385
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001153139.1
SIO_010081: LOC105869385
subclass of: SO_0000673
so part of: LOC105869385
location: complement(join(5040642..5041108,5041546..5041707,5044717..5045103))
location: region:5040642-5045103:-1
so has part: feature:5044717-5045103:-1:exon
so has part: feature:5041546-5041707:-1:exon
so has part: feature:5040642-5041108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5044717-5045103:-1:exon

position:5044717:-1
position: 5044717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5041546-5041707:-1:exon

position:5041546:-1
position: 5041546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5041707:-1
position: 5041707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5040642-5041108:-1:exon

position:5041108:-1
position: 5041108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105869386
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105869386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5089854..5091412
location: region:5089854-5091412:1
so has part: feature:5089854-5091412:1:exon
subclass of: SO_0000011

105869386
type: Gene
SIO_000068: ncbigene

position:5089854:1
position: 5089854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5091412:1
position: 5091412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5089854-5091412:1:exon

LOC105869386
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869386
product: uncharacterized LOC105869386, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001153140.2
SIO_010081: LOC105869386
subclass of: SO_0000673
so part of: LOC105869386
location: join(5089854..5090225,5090350..5090650,5090893..5091412)
location: region:5089854-5091412:1
so has part: feature:5089854-5090225:1:exon
so has part: feature:5090350-5090650:1:exon
so has part: feature:5090893-5091412:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5089854-5090225:1:exon

position:5090225:1
position: 5090225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5090350-5090650:1:exon

position:5090350:1
position: 5090350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5090650:1
position: 5090650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5090893-5091412:1:exon

position:5090893:1
position: 5090893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105869386
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869386
product: uncharacterized LOC105869386, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222725.1
SIO_010081: LOC105869386
subclass of: SO_0000673
so part of: LOC105869386
location: join(5089854..5090225,5090350..5090551,5090893..5091412)
location: region:5089854-5091412:1
so has part: feature:5089854-5090225:1:exon
so has part: feature:5090350-5090551:1:exon
so has part: feature:5090893-5091412:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5089854-5090225:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5090350-5090551:1:exon

position:5090551:1
position: 5090551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5090893-5091412:1:exon

LOC105869386
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105869386
product: uncharacterized LOC105869386, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001153141.2
SIO_010081: LOC105869386
subclass of: SO_0000673
so part of: LOC105869386
location: join(5089854..5090225,5090350..5090551,5090897..5091412)
location: region:5089854-5091412:1
so has part: feature:5089854-5090225:1:exon
so has part: feature:5090350-5090551:1:exon
so has part: feature:5090897-5091412:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5089854-5090225:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5090350-5090551:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5090897-5091412:1:exon

position:5090897:1
position: 5090897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105882976
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105882976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5335704..5349124)
location: region:5335704-5349124:-1
so has part: feature:5335704-5349124:-1:exon
subclass of: SO_0000011

105882976
type: Gene
SIO_000068: ncbigene

position:5335704:-1
position: 5335704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5349124:-1
position: 5349124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5335704-5349124:-1:exon

LOC105882976
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105882976
product: uncharacterized LOC105882976, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159583.2
SIO_010081: LOC105882976
subclass of: SO_0000673
so part of: LOC105882976
location: complement(join(5335704..5335990,5338553..5338604,5340685..5340867,5341068..5341261,5345178..5345272,5348825..5349124))
location: region:5335704-5349124:-1
so has part: feature:5348825-5349124:-1:exon
so has part: feature:5345178-5345272:-1:exon
so has part: feature:5341068-5341261:-1:exon
so has part: feature:5340685-5340867:-1:exon
so has part: feature:5338553-5338604:-1:exon
so has part: feature:5335704-5335990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5348825-5349124:-1:exon

position:5348825:-1
position: 5348825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5345178-5345272:-1:exon

position:5345178:-1
position: 5345178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5345272:-1
position: 5345272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5341068-5341261:-1:exon

position:5341068:-1
position: 5341068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5341261:-1
position: 5341261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5340685-5340867:-1:exon

position:5340685:-1
position: 5340685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5340867:-1
position: 5340867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5338553-5338604:-1:exon

position:5338553:-1
position: 5338553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5338604:-1
position: 5338604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5335704-5335990:-1:exon

position:5335990:-1
position: 5335990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105882976
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105882976
product: uncharacterized LOC105882976, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159588.1
SIO_010081: LOC105882976
subclass of: SO_0000673
so part of: LOC105882976
location: complement(join(5335704..5335990,5338553..5338604,5340685..5340867,5341068..5341261,5345178..5345272,5347445..5347510))
location: region:5335704-5347510:-1
so has part: feature:5347445-5347510:-1:exon
so has part: feature:5345178-5345272:-1:exon
so has part: feature:5341068-5341261:-1:exon
so has part: feature:5340685-5340867:-1:exon
so has part: feature:5338553-5338604:-1:exon
so has part: feature:5335704-5335990:-1:exon

position:5347510:-1
position: 5347510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5347445-5347510:-1:exon

position:5347445:-1
position: 5347445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5345178-5345272:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5341068-5341261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5340685-5340867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5338553-5338604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5335704-5335990:-1:exon

LOC105882976
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105882976
product: uncharacterized LOC105882976, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159578.2
SIO_010081: LOC105882976
subclass of: SO_0000673
so part of: LOC105882976
location: complement(join(5335704..5335990,5338553..5338604,5340685..5340867,5341068..5341261,5345178..5345272,5346723..5347069))
location: region:5335704-5347069:-1
so has part: feature:5346723-5347069:-1:exon
so has part: feature:5345178-5345272:-1:exon
so has part: feature:5341068-5341261:-1:exon
so has part: feature:5340685-5340867:-1:exon
so has part: feature:5338553-5338604:-1:exon
so has part: feature:5335704-5335990:-1:exon

position:5347069:-1
position: 5347069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5346723-5347069:-1:exon

position:5346723:-1
position: 5346723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5345178-5345272:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5341068-5341261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5340685-5340867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5338553-5338604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5335704-5335990:-1:exon

LOC105882976
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105882976
product: uncharacterized LOC105882976, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001159580.2
SIO_010081: LOC105882976
subclass of: SO_0000673
so part of: LOC105882976
location: complement(join(5335704..5335990,5338553..5338604,5340685..5340867,5341068..5341261,5345178..5345272,5345514..5347069))
location: region:5335704-5347069:-1
so has part: feature:5345514-5347069:-1:exon
so has part: feature:5345178-5345272:-1:exon
so has part: feature:5341068-5341261:-1:exon
so has part: feature:5340685-5340867:-1:exon
so has part: feature:5338553-5338604:-1:exon
so has part: feature:5335704-5335990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5345514-5347069:-1:exon

position:5345514:-1
position: 5345514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5345178-5345272:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5341068-5341261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5340685-5340867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5338553-5338604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5335704-5335990:-1:exon

LOC105882976
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105882976
product: uncharacterized LOC105882976, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001159577.2
SIO_010081: LOC105882976
subclass of: SO_0000673
so part of: LOC105882976
location: complement(join(5335704..5335990,5338553..5338604,5340685..5340867,5341068..5341261,5345178..5347069))
location: region:5335704-5347069:-1
so has part: feature:5345178-5347069:-1:exon
so has part: feature:5341068-5341261:-1:exon
so has part: feature:5340685-5340867:-1:exon
so has part: feature:5338553-5338604:-1:exon
so has part: feature:5335704-5335990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5345178-5347069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5341068-5341261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5340685-5340867:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5338553-5338604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5335704-5335990:-1:exon

LOC105882976
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105882976
product: uncharacterized LOC105882976, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222727.1
SIO_010081: LOC105882976
subclass of: SO_0000673
so part of: LOC105882976
location: complement(join(5337628..5337644,5338553..5338604,5340685..5340867,5341068..5341261,5345178..5347069))
location: region:5337628-5347069:-1
so has part: feature:5345178-5347069:-1:exon
so has part: feature:5341068-5341261:-1:exon
so has part: feature:5340685-5340867:-1:exon
so has part: feature:5338553-5338604:-1:exon
so has part: feature:5337628-5337644:-1:exon

position:5337628:-1
position: 5337628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5345178-5347069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5341068-5341261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5340685-5340867:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5338553-5338604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5337628-5337644:-1:exon

position:5337644:-1
position: 5337644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105882976
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105882976
product: uncharacterized LOC105882976, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222728.1
SIO_010081: LOC105882976
subclass of: SO_0000673
so part of: LOC105882976
location: complement(join(5337821..5337914,5338553..5338604,5340685..5340867,5341068..5341261,5345178..5347069))
location: region:5337821-5347069:-1
so has part: feature:5345178-5347069:-1:exon
so has part: feature:5341068-5341261:-1:exon
so has part: feature:5340685-5340867:-1:exon
so has part: feature:5338553-5338604:-1:exon
so has part: feature:5337821-5337914:-1:exon

position:5337821:-1
position: 5337821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5345178-5347069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5341068-5341261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5340685-5340867:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5338553-5338604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5337821-5337914:-1:exon

position:5337914:-1
position: 5337914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DRD1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: DRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5553083..5559271)
location: region:5553083-5559271:-1
so has part: feature:5553083-5559271:-1:exon
subclass of: SO_0000010

105880477
type: Gene
SIO_000068: ncbigene

position:5553083:-1
position: 5553083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5559271:-1
position: 5559271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5553083-5559271:-1:exon

DRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: DRD1
product: dopamine receptor D1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 4 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012781544.2
SIO_010081: DRD1
subclass of: SO_0000673
so part of: DRD1
location: complement(join(5553083..5558233,5559255..5559271))
location: region:5553083-5559271:-1
so has part: feature:5559255-5559271:-1:exon
so has part: feature:5553083-5558233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5559255-5559271:-1:exon

position:5559255:-1
position: 5559255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5553083-5558233:-1:exon

position:5558233:-1
position: 5558233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: DRD1
product: dopamine receptor D1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 4 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012781543.2
SIO_010081: DRD1
subclass of: SO_0000673
so part of: DRD1
location: complement(join(5553083..5558233,5559164..5559239))
location: region:5553083-5559239:-1
so has part: feature:5559164-5559239:-1:exon
so has part: feature:5553083-5558233:-1:exon

position:5559239:-1
position: 5559239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5559164-5559239:-1:exon

position:5559164:-1
position: 5559164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5553083-5558233:-1:exon

DRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: DRD1
product: dopamine receptor D1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 4 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012781542.2
SIO_010081: DRD1
subclass of: SO_0000673
so part of: DRD1
location: complement(join(5553083..5558233,5558349..5558809))
location: region:5553083-5558809:-1
so has part: feature:5558349-5558809:-1:exon
so has part: feature:5553083-5558233:-1:exon

position:5558809:-1
position: 5558809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5558349-5558809:-1:exon

position:5558349:-1
position: 5558349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5553083-5558233:-1:exon

DRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: DRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D(1A) dopamine receptor
translation: MRTLNTSTMDRAGLVVQRDFSFRILTACFLSLLILSTLLGNTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPWKAVAEIAGFWPFGSFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFILISVAWTLSVLISFIPVQLSWHKAKPTGPSDGNATSPGETVDNCDSSLSRTYAISSSLISFYIPVAIMLVTYTRIYRIAQKQIRRISALERAAVHAKNCQTATGNGKPVECSQPESSFKMSFKRETKVLKTLSVIMGVFVCCWLPFFILNCILPFCGSGETQPFCIDSITFDVFVWFGWANSSLNPIIYAFNADFRKAFSTLLGCYRLCPATNNAIETVSINNNGAVVFSSHHEPRGSISKECNLVYLIPHAVGSSEDLKKEEAGGIAKPLEKLSPALSVILDYDTDVSLEKIQPLAQNGQHPT
SIO_010081: DRD1
subclass of: SO_0000673
so part of: DRD1
location: complement(5556400..5557740)
location: region:5556400-5557740:-1
so has part: feature:5556400-5557740:-1:exon

XP_012636996.1
type: Protein
SIO_000068: ncbiprotein

position:5556400:-1
position: 5556400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5557740:-1
position: 5557740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5556400-5557740:-1:exon

DRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: DRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D(1A) dopamine receptor
translation: MRTLNTSTMDRAGLVVQRDFSFRILTACFLSLLILSTLLGNTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPWKAVAEIAGFWPFGSFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFILISVAWTLSVLISFIPVQLSWHKAKPTGPSDGNATSPGETVDNCDSSLSRTYAISSSLISFYIPVAIMLVTYTRIYRIAQKQIRRISALERAAVHAKNCQTATGNGKPVECSQPESSFKMSFKRETKVLKTLSVIMGVFVCCWLPFFILNCILPFCGSGETQPFCIDSITFDVFVWFGWANSSLNPIIYAFNADFRKAFSTLLGCYRLCPATNNAIETVSINNNGAVVFSSHHEPRGSISKECNLVYLIPHAVGSSEDLKKEEAGGIAKPLEKLSPALSVILDYDTDVSLEKIQPLAQNGQHPT
SIO_010081: DRD1
subclass of: SO_0000673
so part of: DRD1
location: complement(5556400..5557740)
location: region:5556400-5557740:-1
so has part: feature:5556400-5557740:-1:exon

XP_012636997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5556400-5557740:-1:exon

DRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: DRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D(1A) dopamine receptor
translation: MRTLNTSTMDRAGLVVQRDFSFRILTACFLSLLILSTLLGNTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPWKAVAEIAGFWPFGSFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFILISVAWTLSVLISFIPVQLSWHKAKPTGPSDGNATSPGETVDNCDSSLSRTYAISSSLISFYIPVAIMLVTYTRIYRIAQKQIRRISALERAAVHAKNCQTATGNGKPVECSQPESSFKMSFKRETKVLKTLSVIMGVFVCCWLPFFILNCILPFCGSGETQPFCIDSITFDVFVWFGWANSSLNPIIYAFNADFRKAFSTLLGCYRLCPATNNAIETVSINNNGAVVFSSHHEPRGSISKECNLVYLIPHAVGSSEDLKKEEAGGIAKPLEKLSPALSVILDYDTDVSLEKIQPLAQNGQHPT
SIO_010081: DRD1
subclass of: SO_0000673
so part of: DRD1
location: complement(5556400..5557740)
location: region:5556400-5557740:-1
so has part: feature:5556400-5557740:-1:exon

XP_012636998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5556400-5557740:-1:exon

SFXN1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: SFXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5584204..5610199
location: region:5584204-5610199:1
so has part: feature:5584204-5610199:1:exon
subclass of: SO_0000010

105880476
type: Gene
SIO_000068: ncbigene

position:5584204:1
position: 5584204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5610199:1
position: 5610199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5584204-5610199:1:exon

SFXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SFXN1
product: sideroflexin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 ESTs, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_020284217.1
SIO_010081: SFXN1
subclass of: SO_0000673
so part of: SFXN1
location: join(5584204..5584413,5586952..5587123,5592005..5592175,5593551..5593653,5597466..5597551,5598824..5598951,5601931..5601980,5605845..5605894,5606270..5606317,5607693..5610199)
location: region:5584204-5610199:1
so has part: feature:5584204-5584413:1:exon
so has part: feature:5586952-5587123:1:exon
so has part: feature:5592005-5592175:1:exon
so has part: feature:5593551-5593653:1:exon
so has part: feature:5597466-5597551:1:exon
so has part: feature:5598824-5598951:1:exon
so has part: feature:5601931-5601980:1:exon
so has part: feature:5605845-5605894:1:exon
so has part: feature:5606270-5606317:1:exon
so has part: feature:5607693-5610199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5584204-5584413:1:exon

position:5584413:1
position: 5584413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5586952-5587123:1:exon

position:5586952:1
position: 5586952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5587123:1
position: 5587123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5592005-5592175:1:exon

position:5592005:1
position: 5592005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5592175:1
position: 5592175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5593551-5593653:1:exon

position:5593551:1
position: 5593551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5593653:1
position: 5593653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5597466-5597551:1:exon

position:5597466:1
position: 5597466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5597551:1
position: 5597551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5598824-5598951:1:exon

position:5598824:1
position: 5598824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5598951:1
position: 5598951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5601931-5601980:1:exon

position:5601931:1
position: 5601931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5601980:1
position: 5601980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5605845-5605894:1:exon

position:5605845:1
position: 5605845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5605894:1
position: 5605894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5606270-5606317:1:exon

position:5606270:1
position: 5606270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5606317:1
position: 5606317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5607693-5610199:1:exon

position:5607693:1
position: 5607693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SFXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SFXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sideroflexin-1
translation: MKEELPGGFHRSLKMSSWCSAPLPLPPHIRTMSGELPPNIDIREPRWDQSSFSGRANHFFTVTDPRNILLTNEQLEDARKTVHDYRQGIVPPGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTAPAVVFWQWINQSFNAVVNYTNRSGDAPLTVKYHVSPLIGRFVPFAAVAAANCINIPLMRQRELRVGIPVTDENGNRLGESANAAQQAIAQVVVSRILMAAPGMAIPPFLMNTLEKKAFLKRFPWMSAPIQVGLVGFCLVFATPLCCALFPQKSSMSVTSLEAELQAKIREAHPELRRVYFNKGL
SIO_010081: SFXN1
subclass of: SO_0000673
so part of: SFXN1
location: join(5584329..5584413,5586952..5587123,5592005..5592175,5593551..5593653,5597466..5597551,5598824..5598951,5601931..5601980,5605845..5605894,5606270..5606317,5607693..5607789)
location: region:5584329-5607789:1
so has part: feature:5584329-5584413:1:exon
so has part: feature:5586952-5587123:1:exon
so has part: feature:5592005-5592175:1:exon
so has part: feature:5593551-5593653:1:exon
so has part: feature:5597466-5597551:1:exon
so has part: feature:5598824-5598951:1:exon
so has part: feature:5601931-5601980:1:exon
so has part: feature:5605845-5605894:1:exon
so has part: feature:5606270-5606317:1:exon
so has part: feature:5607693-5607789:1:exon

XP_020139806.1
type: Protein
SIO_000068: ncbiprotein

position:5584329:1
position: 5584329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5607789:1
position: 5607789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5584329-5584413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5586952-5587123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5592005-5592175:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5593551-5593653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5597466-5597551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5598824-5598951:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5601931-5601980:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5605845-5605894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5606270-5606317:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5607693-5607789:1:exon

HRH2
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: HRH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5710469..5757059
location: region:5710469-5757059:1
so has part: feature:5710469-5757059:1:exon
subclass of: SO_0000010

105880475
type: Gene
SIO_000068: ncbigene

position:5710469:1
position: 5710469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5757059:1
position: 5757059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5710469-5757059:1:exon

HRH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: HRH2
product: histamine receptor H2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012781540.2
SIO_010081: HRH2
subclass of: SO_0000673
so part of: HRH2
location: join(5710469..5710578,5738625..5740192,5756521..5757059)
location: region:5710469-5757059:1
so has part: feature:5710469-5710578:1:exon
so has part: feature:5738625-5740192:1:exon
so has part: feature:5756521-5757059:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5710469-5710578:1:exon

position:5710578:1
position: 5710578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5738625-5740192:1:exon

position:5738625:1
position: 5738625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5740192:1
position: 5740192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5756521-5757059:1:exon

position:5756521:1
position: 5756521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HRH2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: HRH2
product: histamine receptor H2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001158260.2
SIO_010081: HRH2
so part of: HRH2
location: join(5710473..5710578,5738625..5740192,5745156..5745292,5756521..5756607)
location: region:5710473-5756607:1
so has part: feature:5710473-5710578:1:exon
so has part: feature:5738625-5740192:1:exon
so has part: feature:5745156-5745292:1:exon
so has part: feature:5756521-5756607:1:exon

position:5710473:1
position: 5710473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5756607:1
position: 5756607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5710473-5710578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5738625-5740192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5745156-5745292:1:exon

position:5745156:1
position: 5745156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5745292:1
position: 5745292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5756521-5756607:1:exon

HRH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: HRH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histamine H2 receptor
translation: MASNATASSLCLDSTACRVTISMVLTILILITIAGNVVVCLAVGLNRRLRNLTNCFIVSLAVTDLLLGLLVLPFSAIHQLSCTWSFGRVFCNIYTSLDVMLCTASILNLFMISLDRYCAVMDPLRYPVLVTPVRVAVSLVLIWVISITLSFLSIHLGWNSRAETSKSNHTTAKCKVQVNEVYGLVDGLVTFYLPLLVMCVTYYRIFKVARDQAKRINHISSWKAATIREHKATVTLAAVMGAFIICWFPYFTVFVYRGLKGDDAINEVFEAVVLWLGYANSALNPILYAALNRDFRTGYRQLFCCGLAGRNSRGTSLRSSSSQLSRSQSREARWQEEKPLKLQVWSGTEATATQGATDRKPALSCTACASNLLSCCKSLWGSRALQRHVGGPVEEPPGGPPSEQPPSPPLPEDRRTLPSKAVHTPPQDTEDAAPSP
SIO_010081: HRH2
subclass of: SO_0000673
so part of: HRH2
location: join(5739117..5740192,5756521..5756755)
location: region:5739117-5756755:1
so has part: feature:5739117-5740192:1:exon
so has part: feature:5756521-5756755:1:exon

XP_012636994.1
type: Protein
SIO_000068: ncbiprotein

position:5739117:1
position: 5739117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5756755:1
position: 5756755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5739117-5740192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5756521-5756755:1:exon

LOC105880474
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105880474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5795318..5810164
location: region:5795318-5810164:1
so has part: feature:5795318-5810164:1:exon
subclass of: SO_0000011

105880474
type: Gene
SIO_000068: ncbigene

position:5795318:1
position: 5795318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5810164:1
position: 5810164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5795318-5810164:1:exon

LOC105880474
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105880474
product: uncharacterized LOC105880474
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001158259.1
SIO_010081: LOC105880474
subclass of: SO_0000673
so part of: LOC105880474
location: join(5795318..5795478,5808169..5808411,5809360..5810164)
location: region:5795318-5810164:1
so has part: feature:5795318-5795478:1:exon
so has part: feature:5808169-5808411:1:exon
so has part: feature:5809360-5810164:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5795318-5795478:1:exon

position:5795478:1
position: 5795478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5808169-5808411:1:exon

position:5808169:1
position: 5808169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5808411:1
position: 5808411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5809360-5810164:1:exon

position:5809360:1
position: 5809360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105880456
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105880456
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5837728..5867625
location: region:5837728-5867625:1
so has part: feature:5837728-5867625:1:exon
subclass of: SO_0000011

105880456
type: Gene
SIO_000068: ncbigene

position:5837728:1
position: 5837728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5867625:1
position: 5867625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5837728-5867625:1:exon

LOC105880456
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105880456
product: uncharacterized LOC105880456, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222705.1
SIO_010081: LOC105880456
subclass of: SO_0000673
so part of: LOC105880456
location: join(5837728..5838965,5839438..5839490,5841609..5841691,5867205..5867625)
location: region:5837728-5867625:1
so has part: feature:5837728-5838965:1:exon
so has part: feature:5839438-5839490:1:exon
so has part: feature:5841609-5841691:1:exon
so has part: feature:5867205-5867625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5837728-5838965:1:exon

position:5838965:1
position: 5838965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5839438-5839490:1:exon

position:5839438:1
position: 5839438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5839490:1
position: 5839490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5841609-5841691:1:exon

position:5841609:1
position: 5841609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5841691:1
position: 5841691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5867205-5867625:1:exon

position:5867205:1
position: 5867205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105880456
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105880456
product: uncharacterized LOC105880456, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222707.1
SIO_010081: LOC105880456
subclass of: SO_0000673
so part of: LOC105880456
location: join(5837728..5838965,5839438..5839490,5841609..5841691,5860048..5861124)
location: region:5837728-5861124:1
so has part: feature:5837728-5838965:1:exon
so has part: feature:5839438-5839490:1:exon
so has part: feature:5841609-5841691:1:exon
so has part: feature:5860048-5861124:1:exon

position:5861124:1
position: 5861124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5837728-5838965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5839438-5839490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5841609-5841691:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5860048-5861124:1:exon

position:5860048:1
position: 5860048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105880456
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105880456
product: uncharacterized LOC105880456, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222706.1
SIO_010081: LOC105880456
subclass of: SO_0000673
so part of: LOC105880456
location: join(5837728..5838965,5839438..5839490,5841609..5841691,5855903..5856150)
location: region:5837728-5856150:1
so has part: feature:5837728-5838965:1:exon
so has part: feature:5839438-5839490:1:exon
so has part: feature:5841609-5841691:1:exon
so has part: feature:5855903-5856150:1:exon

position:5856150:1
position: 5856150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5837728-5838965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5839438-5839490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5841609-5841691:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5855903-5856150:1:exon

position:5855903:1
position: 5855903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105880456
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105880456
product: uncharacterized LOC105880456, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002222704.1
SIO_010081: LOC105880456
subclass of: SO_0000673
so part of: LOC105880456
location: join(5837728..5838965,5839438..5839490,5841609..5841691,5843616..5845969)
location: region:5837728-5845969:1
so has part: feature:5837728-5838965:1:exon
so has part: feature:5839438-5839490:1:exon
so has part: feature:5841609-5841691:1:exon
so has part: feature:5843616-5845969:1:exon

position:5845969:1
position: 5845969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5837728-5838965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5839438-5839490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5841609-5841691:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5843616-5845969:1:exon

position:5843616:1
position: 5843616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPLX2
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: CPLX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5906408..5915572
location: region:5906408-5915572:1
so has part: feature:5906408-5915572:1:exon
subclass of: SO_0000010

105880473
type: Gene
SIO_000068: ncbigene

position:5906408:1
position: 5906408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5915572:1
position: 5915572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5906408-5915572:1:exon

CPLX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CPLX2
product: complexin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 204 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012781538.1
SIO_010081: CPLX2
subclass of: SO_0000673
so part of: CPLX2
location: join(5906408..5906603,5914206..5914324,5914436..5914611,5915272..5915572)
location: region:5906408-5915572:1
so has part: feature:5906408-5906603:1:exon
so has part: feature:5914206-5914324:1:exon
so has part: feature:5914436-5914611:1:exon
so has part: feature:5915272-5915572:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5906408-5906603:1:exon

position:5906603:1
position: 5906603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5914206-5914324:1:exon

position:5914206:1
position: 5914206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5914324:1
position: 5914324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5914436-5914611:1:exon

position:5914436:1
position: 5914436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5914611:1
position: 5914611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5915272-5915572:1:exon

position:5915272:1
position: 5915272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPLX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CPLX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complexin-2
translation: MDFVMKQALGGATKDMGKMLGGEEEKDPDAQKKEEERQEALRQQEEERKAKHARMEAEREKVRQQIRDKYGLKKKEEKEAEEKAALEQPCEGSLTRPKKAIPAGCGDEEEEEEESILDTVLKYLPGPLQDMFKK
SIO_010081: CPLX2
subclass of: SO_0000673
so part of: CPLX2
location: join(5914294..5914324,5914436..5914611,5915272..5915469)
location: region:5914294-5915469:1
so has part: feature:5914294-5914324:1:exon
so has part: feature:5914436-5914611:1:exon
so has part: feature:5915272-5915469:1:exon

XP_012636992.1
type: Protein
SIO_000068: ncbiprotein

position:5914294:1
position: 5914294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5915469:1
position: 5915469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5914294-5914324:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5914436-5914611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5915272-5915469:1:exon

THOC3
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: THOC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5997263..6005551)
location: region:5997263-6005551:-1
so has part: feature:5997263-6005551:-1:exon
subclass of: SO_0000010

105880471
type: Gene
SIO_000068: ncbigene

position:5997263:-1
position: 5997263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6005551:-1
position: 6005551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5997263-6005551:-1:exon

THOC3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: THOC3
product: THO complex 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 281 ESTs, 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_001158257.2
SIO_010081: THOC3
so part of: THOC3
location: complement(join(5997263..5997517,5997654..5997877,5999170..5999270,5999390..5999551,6002495..6002699,6004395..6004551,6005189..6005551))
location: region:5997263-6005551:-1
so has part: feature:6005189-6005551:-1:exon
so has part: feature:6004395-6004551:-1:exon
so has part: feature:6002495-6002699:-1:exon
so has part: feature:5999390-5999551:-1:exon
so has part: feature:5999170-5999270:-1:exon
so has part: feature:5997654-5997877:-1:exon
so has part: feature:5997263-5997517:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6005189-6005551:-1:exon

position:6005189:-1
position: 6005189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6004395-6004551:-1:exon

position:6004395:-1
position: 6004395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6004551:-1
position: 6004551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6002495-6002699:-1:exon

position:6002495:-1
position: 6002495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6002699:-1
position: 6002699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5999390-5999551:-1:exon

position:5999390:-1
position: 5999390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5999551:-1
position: 5999551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5999170-5999270:-1:exon

position:5999170:-1
position: 5999170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5999270:-1
position: 5999270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5997654-5997877:-1:exon

position:5997654:-1
position: 5997654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5997877:-1
position: 5997877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5997263-5997517:-1:exon

position:5997517:-1
position: 5997517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

THOC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: THOC3
product: THO complex 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 291 ESTs, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012781537.2
SIO_010081: THOC3
subclass of: SO_0000673
so part of: THOC3
location: complement(join(5997264..5997877,5999170..5999270,5999390..5999551,6002495..6002699,6004395..6004551,6005189..6005551))
location: region:5997264-6005551:-1
so has part: feature:6005189-6005551:-1:exon
so has part: feature:6004395-6004551:-1:exon
so has part: feature:6002495-6002699:-1:exon
so has part: feature:5999390-5999551:-1:exon
so has part: feature:5999170-5999270:-1:exon
so has part: feature:5997264-5997877:-1:exon

position:5997264:-1
position: 5997264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6005189-6005551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6004395-6004551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6002495-6002699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5999390-5999551:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5999170-5999270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5997264-5997877:-1:exon

THOC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: THOC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THO complex subunit 3
translation: MAVPAAAMGPSALGQSGPGSMAPWCSVSSGPSRYVLGMQDLFRGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDARTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS
SIO_010081: THOC3
subclass of: SO_0000673
so part of: THOC3
location: complement(join(5997714..5997877,5999170..5999270,5999390..5999551,6002495..6002699,6004395..6004551,6005189..6005455))
location: region:5997714-6005455:-1
so has part: feature:6005189-6005455:-1:exon
so has part: feature:6004395-6004551:-1:exon
so has part: feature:6002495-6002699:-1:exon
so has part: feature:5999390-5999551:-1:exon
so has part: feature:5999170-5999270:-1:exon
so has part: feature:5997714-5997877:-1:exon

XP_012636991.1
type: Protein
SIO_000068: ncbiprotein

position:5997714:-1
position: 5997714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6005455:-1
position: 6005455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6005189-6005455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6004395-6004551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6002495-6002699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5999390-5999551:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5999170-5999270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5997714-5997877:-1:exon

LOC109730079
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6028540..6031502
location: region:6028540-6031502:1
so has part: feature:6028540-6031502:1:exon
subclass of: SO_0000011

109730079
type: Gene
SIO_000068: ncbigene

position:6028540:1
position: 6028540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6031502:1
position: 6031502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6028540-6031502:1:exon

LOC109730079
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC109730079
product: uncharacterized LOC109730079
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_002222726.1
SIO_010081: LOC109730079
subclass of: SO_0000673
so part of: LOC109730079
location: join(6028540..6028661,6031341..6031502)
location: region:6028540-6031502:1
so has part: feature:6028540-6028661:1:exon
so has part: feature:6031341-6031502:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6028540-6028661:1:exon

position:6028661:1
position: 6028661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6031341-6031502:1:exon

position:6031341:1
position: 6031341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105880457
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105880457
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6035338..6037118)
location: region:6035338-6037118:-1
so has part: feature:6035338-6037118:-1:exon
subclass of: SO_0000011

105880457
type: Gene
SIO_000068: ncbigene

position:6035338:-1
position: 6035338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6037118:-1
position: 6037118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6035338-6037118:-1:exon

LOC105880457
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30608
nc RNA class: lncRNA
gene: LOC105880457
product: uncharacterized LOC105880457
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001158255.1
SIO_010081: LOC105880457
subclass of: SO_0000673
so part of: LOC105880457
location: complement(join(6035338..6036477,6036882..6037118))
location: region:6035338-6037118:-1
so has part: feature:6036882-6037118:-1:exon
so has part: feature:6035338-6036477:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6036882-6037118:-1:exon

position:6036882:-1
position: 6036882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6035338-6036477:-1:exon

position:6036477:-1
position: 6036477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIMC1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: SIMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6037339..6121091
location: region:6037339-6121091:1
so has part: feature:6037339-6121091:1:exon
subclass of: SO_0000010

105880455
type: Gene
SIO_000068: ncbigene

position:6037339:1
position: 6037339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6121091:1
position: 6121091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6037339-6121091:1:exon

SIMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SIMC1
product: SUMO interacting motifs containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 5 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284218.1
SIO_010081: SIMC1
subclass of: SO_0000673
so part of: SIMC1
location: join(6037339..6037520,6050883..6052442,6056402..6056634,6083666..6083735,6086607..6086768,6088542..6088609,6097275..6097463,6100411..6100567,6100750..6100834,6120742..6121091)
location: region:6037339-6121091:1
so has part: feature:6037339-6037520:1:exon
so has part: feature:6050883-6052442:1:exon
so has part: feature:6056402-6056634:1:exon
so has part: feature:6083666-6083735:1:exon
so has part: feature:6086607-6086768:1:exon
so has part: feature:6088542-6088609:1:exon
so has part: feature:6097275-6097463:1:exon
so has part: feature:6100411-6100567:1:exon
so has part: feature:6100750-6100834:1:exon
so has part: feature:6120742-6121091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6037339-6037520:1:exon

position:6037520:1
position: 6037520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6050883-6052442:1:exon

position:6050883:1
position: 6050883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6052442:1
position: 6052442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6056402-6056634:1:exon

position:6056402:1
position: 6056402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6056634:1
position: 6056634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6083666-6083735:1:exon

position:6083666:1
position: 6083666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6083735:1
position: 6083735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6086607-6086768:1:exon

position:6086607:1
position: 6086607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6086768:1
position: 6086768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6088542-6088609:1:exon

position:6088542:1
position: 6088542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6088609:1
position: 6088609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6097275-6097463:1:exon

position:6097275:1
position: 6097275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6097463:1
position: 6097463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6100411-6100567:1:exon

position:6100411:1
position: 6100411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6100567:1
position: 6100567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6100750-6100834:1:exon

position:6100750:1
position: 6100750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6100834:1
position: 6100834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6120742-6121091:1:exon

position:6120742:1
position: 6120742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SIMC1
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:6121002..6121004,aa:OTHER)
product: LOW QUALITY PROTEIN: SUMO-interacting motif-containing protein 1
translation: MEDFIVISDDSGSESSGGTRSGRARRLRRALSRTPGALPRRTVDFIDLTREARPRAKDRSGLCVIDLTRTEEESRPIATLDLTLEPVTPSQKEPTSVQTCPSLSSKDVTEGRVDRSSRPAARRIVNSDPVDLDLLEDNTYEGPQPPTAISGDSVYPAEPNCSTPMFKGDLNFLARLQLSSDVSSLSPASNNGSSSSSRQRAPLPCPQQDVPCPLQALPCPLRALPCPLRASPCPPRASSCPPRALSCPPHTVQCQLQALPHPPQEVPCPPQDVRCPQQNMPASPQDTLWHPQHLAHPPQDSLGLPRDAPGPPQNTLYPPDAAQLQDMPQLPGDMLQSPGDAPQSPGNVPLSPRDVPPSPGDAPQTPGNVPQSLGDVPQSLGDVPQSPGDVPQSPGDAPQTPGNLPQSPGDVPYLPGDVPYLPGDVLRSPGDMPCSSEDMPCSPGDTPHLPRDRPDSPQNDVQNINTPMDISNPSSPSCSPSPQSPQSESSLEKVPWLSVMETPARKEISLSEPANPGPAQVQARTPQGGLYSRPCLHRLKYFLRPPVHHLFFQTLIPDKDTRENKGQKLEPIPHRRLRMVTNTIEENFPLGTVQFLMDFVSPQHYPPREIVAHIIQKILLSGSETVDVLKEAYMLLMKIQQLHPANAKTVEWDWKLLTYVMEEEGQTLPGRVLFLRYVVQTLEDDFQQTLRRQRQHLQQSIANTVLSCDRQPHNVRYPPAAGETQPDMATPDVGIGNPPEGQRVAPCKTLPPTCVLCSGLRIVCQLQRMLSIAVEVDRTPTCSSNKIAEMMFGFVLDIPERSQREMFFTTMESHLLRCKVLEIIFLHSCETPTRLPLSLAQALYFLNNSTSLLKCQSDKTQWQTWDELVEHLQFLLSSYQHVLREHLRSSVIDRKDLIIKRIKPKPQQGDDITVVDVEKQIEAFRSRLVQMLGEPLVPQLQDKVHLLKLLLFYAADLNPDAEPSQKNWGSSXGPSTHWTPRIPPGLCLQLLRSSKSMKSS
SIO_010081: SIMC1
subclass of: SO_0000673
so part of: SIMC1
location: join(6037392..6037520,6050883..6052442,6056402..6056634,6083666..6083735,6086607..6086768,6088542..6088609,6097275..6097463,6100411..6100567,6100750..6100834,6120742..6121091)
location: region:6037392-6121091:1
so has part: feature:6037392-6037520:1:exon
so has part: feature:6050883-6052442:1:exon
so has part: feature:6056402-6056634:1:exon
so has part: feature:6083666-6083735:1:exon
so has part: feature:6086607-6086768:1:exon
so has part: feature:6088542-6088609:1:exon
so has part: feature:6097275-6097463:1:exon
so has part: feature:6100411-6100567:1:exon
so has part: feature:6100750-6100834:1:exon
so has part: feature:6120742-6121091:1:exon

XP_020139807.1
type: Protein
SIO_000068: ncbiprotein

position:6037392:1
position: 6037392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6037392-6037520:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6050883-6052442:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6056402-6056634:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6083666-6083735:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6086607-6086768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6088542-6088609:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6097275-6097463:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6100411-6100567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6100750-6100834:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6120742-6121091:1:exon

LOC109730067
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC109730067
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6040774..6041429)
location: region:6040774-6041429:-1
so has part: feature:6040774-6041429:-1:exon

109730067
type: Gene
SIO_000068: ncbigene

position:6040774:-1
position: 6040774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6041429:-1
position: 6041429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6040774-6041429:-1:exon

LOC109730067
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC109730067
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109730067
subclass of: SO_0000673
so part of: LOC109730067
location: complement(6040774..6041429)
location: region:6040774-6041429:-1
so has part: feature:6040774-6041429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6040774-6041429:-1:exon

LOC105880469
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105880469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6043348..6044812
location: region:6043348-6044812:1
so has part: feature:6043348-6044812:1:exon

105880469
type: Gene
SIO_000068: ncbigene

position:6043348:1
position: 6043348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6044812:1
position: 6044812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6043348-6044812:1:exon

LOC105880469
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105880469
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105880469
subclass of: SO_0000673
so part of: LOC105880469
location: 6043348..6044812
location: region:6043348-6044812:1
so has part: feature:6043348-6044812:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6043348-6044812:1:exon

KIAA1191
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: KIAA1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6121653..6160624)
location: region:6121653-6160624:-1
so has part: feature:6121653-6160624:-1:exon
subclass of: SO_0000010

105880468
type: Gene
SIO_000068: ncbigene

position:6121653:-1
position: 6121653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6160624:-1
position: 6160624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6121653-6160624:-1:exon

KIAA1191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: KIAA1191
product: KIAA1191 ortholog, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012781536.2
SIO_010081: KIAA1191
subclass of: SO_0000673
so part of: KIAA1191
location: complement(join(6121653..6123026,6123138..6123280,6123464..6123570,6125652..6125776,6128922..6129048,6146242..6146420,6160420..6160624))
location: region:6121653-6160624:-1
so has part: feature:6160420-6160624:-1:exon
so has part: feature:6146242-6146420:-1:exon
so has part: feature:6128922-6129048:-1:exon
so has part: feature:6125652-6125776:-1:exon
so has part: feature:6123464-6123570:-1:exon
so has part: feature:6123138-6123280:-1:exon
so has part: feature:6121653-6123026:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6160420-6160624:-1:exon

position:6160420:-1
position: 6160420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6146242-6146420:-1:exon

position:6146242:-1
position: 6146242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6146420:-1
position: 6146420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6128922-6129048:-1:exon

position:6128922:-1
position: 6128922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6129048:-1
position: 6129048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6125652-6125776:-1:exon

position:6125652:-1
position: 6125652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6125776:-1
position: 6125776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6123464-6123570:-1:exon

position:6123464:-1
position: 6123464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6123570:-1
position: 6123570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6123138-6123280:-1:exon

position:6123138:-1
position: 6123138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6123280:-1
position: 6123280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6121653-6123026:-1:exon

position:6123026:-1
position: 6123026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIAA1191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: KIAA1191
product: KIAA1191 ortholog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 38 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012781532.2
SIO_010081: KIAA1191
subclass of: SO_0000673
so part of: KIAA1191
location: complement(join(6121653..6123026,6123138..6123280,6123464..6123570,6125652..6125776,6128922..6129048,6146242..6146420,6148714..6148800,6160420..6160547))
location: region:6121653-6160547:-1
so has part: feature:6160420-6160547:-1:exon
so has part: feature:6148714-6148800:-1:exon
so has part: feature:6146242-6146420:-1:exon
so has part: feature:6128922-6129048:-1:exon
so has part: feature:6125652-6125776:-1:exon
so has part: feature:6123464-6123570:-1:exon
so has part: feature:6123138-6123280:-1:exon
so has part: feature:6121653-6123026:-1:exon

position:6160547:-1
position: 6160547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6160420-6160547:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6148714-6148800:-1:exon

position:6148714:-1
position: 6148714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6148800:-1
position: 6148800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6146242-6146420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6128922-6129048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6125652-6125776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6123464-6123570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6123138-6123280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6121653-6123026:-1:exon

KIAA1191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: KIAA1191
product: KIAA1191 ortholog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 64 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012781530.2
SIO_010081: KIAA1191
subclass of: SO_0000673
so part of: KIAA1191
location: complement(join(6121653..6123026,6123138..6123280,6123464..6123570,6125652..6125776,6128922..6129048,6146242..6146420,6148714..6148800,6149104..6149210,6160420..6160547))
location: region:6121653-6160547:-1
so has part: feature:6160420-6160547:-1:exon
so has part: feature:6149104-6149210:-1:exon
so has part: feature:6148714-6148800:-1:exon
so has part: feature:6146242-6146420:-1:exon
so has part: feature:6128922-6129048:-1:exon
so has part: feature:6125652-6125776:-1:exon
so has part: feature:6123464-6123570:-1:exon
so has part: feature:6123138-6123280:-1:exon
so has part: feature:6121653-6123026:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6160420-6160547:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6149104-6149210:-1:exon

position:6149104:-1
position: 6149104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6149210:-1
position: 6149210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6148714-6148800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6146242-6146420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6128922-6129048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6125652-6125776:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6123464-6123570:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6123138-6123280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6121653-6123026:-1:exon

KIAA1191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: KIAA1191
product: KIAA1191 ortholog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 37 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_012781531.2
SIO_010081: KIAA1191
subclass of: SO_0000673
so part of: KIAA1191
location: complement(join(6121653..6123026,6123138..6123280,6123464..6123570,6125652..6125776,6128922..6129048,6146242..6146420,6148714..6148800,6149099..6149210,6160420..6160509))
location: region:6121653-6160509:-1
so has part: feature:6160420-6160509:-1:exon
so has part: feature:6149099-6149210:-1:exon
so has part: feature:6148714-6148800:-1:exon
so has part: feature:6146242-6146420:-1:exon
so has part: feature:6128922-6129048:-1:exon
so has part: feature:6125652-6125776:-1:exon
so has part: feature:6123464-6123570:-1:exon
so has part: feature:6123138-6123280:-1:exon
so has part: feature:6121653-6123026:-1:exon

position:6160509:-1
position: 6160509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6160420-6160509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6149099-6149210:-1:exon

position:6149099:-1
position: 6149099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6148714-6148800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6146242-6146420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6128922-6129048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6125652-6125776:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6123464-6123570:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6123138-6123280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6121653-6123026:-1:exon

KIAA1191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: KIAA1191
product: KIAA1191 ortholog, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012781535.2
SIO_010081: KIAA1191
subclass of: SO_0000673
so part of: KIAA1191
location: complement(join(6121653..6123026,6123138..6123280,6123464..6123570,6125652..6125776,6128922..6129048,6160420..6160441))
location: region:6121653-6160441:-1
so has part: feature:6160420-6160441:-1:exon
so has part: feature:6128922-6129048:-1:exon
so has part: feature:6125652-6125776:-1:exon
so has part: feature:6123464-6123570:-1:exon
so has part: feature:6123138-6123280:-1:exon
so has part: feature:6121653-6123026:-1:exon

position:6160441:-1
position: 6160441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6160420-6160441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6128922-6129048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6125652-6125776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6123464-6123570:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6123138-6123280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6121653-6123026:-1:exon

KIAA1191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: KIAA1191
product: KIAA1191 ortholog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012781534.2
SIO_010081: KIAA1191
subclass of: SO_0000673
so part of: KIAA1191
location: complement(join(6121653..6123026,6123138..6123280,6123464..6123570,6125652..6125776,6128922..6129048,6148714..6148775))
location: region:6121653-6148775:-1
so has part: feature:6148714-6148775:-1:exon
so has part: feature:6128922-6129048:-1:exon
so has part: feature:6125652-6125776:-1:exon
so has part: feature:6123464-6123570:-1:exon
so has part: feature:6123138-6123280:-1:exon
so has part: feature:6121653-6123026:-1:exon

position:6148775:-1
position: 6148775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6148714-6148775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6128922-6129048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6125652-6125776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6123464-6123570:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6123138-6123280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6121653-6123026:-1:exon

KIAA1191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: KIAA1191
product: KIAA1191 ortholog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_020284284.1
SIO_010081: KIAA1191
subclass of: SO_0000673
so part of: KIAA1191
location: complement(join(6121653..6123026,6123138..6123280,6123464..6123570,6125652..6125776,6128922..6129047,6133155..6133240))
location: region:6121653-6133240:-1
so has part: feature:6133155-6133240:-1:exon
so has part: feature:6128922-6129047:-1:exon
so has part: feature:6125652-6125776:-1:exon
so has part: feature:6123464-6123570:-1:exon
so has part: feature:6123138-6123280:-1:exon
so has part: feature:6121653-6123026:-1:exon

position:6133240:-1
position: 6133240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6133155-6133240:-1:exon

position:6133155:-1
position: 6133155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6128922-6129047:-1:exon

position:6129047:-1
position: 6129047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6125652-6125776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6123464-6123570:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6123138-6123280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6121653-6123026:-1:exon

KIAA1191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: KIAA1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative monooxygenase p33MONOX isoform X1
translation: MASRQPEVPALEPSGPLGKMSLPIGICRRAFSYDDALEDPAPMTPPPSDMGSIPWKPVIPERKYQHLAQVEEGEASVSSLAMTLPSATDSVDKVPVVKAKATHVIMNSLVTKQTQESIQRFEQQAGLRDAGYTPHKGLTTEESKYLRVAEALHKLKLQSGEITKEEKQPASAQSTPSSTPHSSPKHRPRGWFTSGSSTALPGPNPGTMDSGSGDKDRNPSDKWSFFGTRPLQKYDSGSFATQAYRGAQKPSPMELIRAQATRMAEDPATFKPPKMDVPVMEGKTQPPRTHSLKPRDLNVLTPTGF
SIO_010081: KIAA1191
subclass of: SO_0000673
so part of: KIAA1191
location: complement(join(6122818..6123026,6123138..6123280,6123464..6123570,6125652..6125776,6128922..6129048,6146242..6146420,6148714..6148741))
location: region:6122818-6148741:-1
so has part: feature:6148714-6148741:-1:exon
so has part: feature:6146242-6146420:-1:exon
so has part: feature:6128922-6129048:-1:exon
so has part: feature:6125652-6125776:-1:exon
so has part: feature:6123464-6123570:-1:exon
so has part: feature:6123138-6123280:-1:exon
so has part: feature:6122818-6123026:-1:exon

XP_012636984.2
type: Protein
SIO_000068: ncbiprotein

position:6122818:-1
position: 6122818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6148741:-1
position: 6148741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6148714-6148741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6146242-6146420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6128922-6129048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6125652-6125776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6123464-6123570:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6123138-6123280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6122818-6123026:-1:exon

KIAA1191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: KIAA1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative monooxygenase p33MONOX isoform X1
translation: MASRQPEVPALEPSGPLGKMSLPIGICRRAFSYDDALEDPAPMTPPPSDMGSIPWKPVIPERKYQHLAQVEEGEASVSSLAMTLPSATDSVDKVPVVKAKATHVIMNSLVTKQTQESIQRFEQQAGLRDAGYTPHKGLTTEESKYLRVAEALHKLKLQSGEITKEEKQPASAQSTPSSTPHSSPKHRPRGWFTSGSSTALPGPNPGTMDSGSGDKDRNPSDKWSFFGTRPLQKYDSGSFATQAYRGAQKPSPMELIRAQATRMAEDPATFKPPKMDVPVMEGKTQPPRTHSLKPRDLNVLTPTGF
SIO_010081: KIAA1191
subclass of: SO_0000673
so part of: KIAA1191
location: complement(join(6122818..6123026,6123138..6123280,6123464..6123570,6125652..6125776,6128922..6129048,6146242..6146420,6148714..6148741))
location: region:6122818-6148741:-1
so has part: feature:6148714-6148741:-1:exon
so has part: feature:6146242-6146420:-1:exon
so has part: feature:6128922-6129048:-1:exon
so has part: feature:6125652-6125776:-1:exon
so has part: feature:6123464-6123570:-1:exon
so has part: feature:6123138-6123280:-1:exon
so has part: feature:6122818-6123026:-1:exon

XP_012636985.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6148714-6148741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6146242-6146420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6128922-6129048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6125652-6125776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6123464-6123570:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6123138-6123280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6122818-6123026:-1:exon

KIAA1191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: KIAA1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative monooxygenase p33MONOX isoform X1
translation: MASRQPEVPALEPSGPLGKMSLPIGICRRAFSYDDALEDPAPMTPPPSDMGSIPWKPVIPERKYQHLAQVEEGEASVSSLAMTLPSATDSVDKVPVVKAKATHVIMNSLVTKQTQESIQRFEQQAGLRDAGYTPHKGLTTEESKYLRVAEALHKLKLQSGEITKEEKQPASAQSTPSSTPHSSPKHRPRGWFTSGSSTALPGPNPGTMDSGSGDKDRNPSDKWSFFGTRPLQKYDSGSFATQAYRGAQKPSPMELIRAQATRMAEDPATFKPPKMDVPVMEGKTQPPRTHSLKPRDLNVLTPTGF
SIO_010081: KIAA1191
subclass of: SO_0000673
so part of: KIAA1191
location: complement(join(6122818..6123026,6123138..6123280,6123464..6123570,6125652..6125776,6128922..6129048,6146242..6146420,6148714..6148741))
location: region:6122818-6148741:-1
so has part: feature:6148714-6148741:-1:exon
so has part: feature:6146242-6146420:-1:exon
so has part: feature:6128922-6129048:-1:exon
so has part: feature:6125652-6125776:-1:exon
so has part: feature:6123464-6123570:-1:exon
so has part: feature:6123138-6123280:-1:exon
so has part: feature:6122818-6123026:-1:exon

XP_012636986.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6148714-6148741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6146242-6146420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6128922-6129048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6125652-6125776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6123464-6123570:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6123138-6123280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6122818-6123026:-1:exon

KIAA1191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: KIAA1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative monooxygenase p33MONOX isoform X3
translation: MSLPIGICRRAFSYDDALEDPAPMTPPPSDMGSIPWKPVIPERKYQHLAQVEEGEASVSSLAMTLPSATDSVDKVPVVKAKATHVIMNSLVTKQTQESIQRFEQQAGLRDAGYTPHKGLTTEESKYLRVAEALHKLKLQSGEITKEEKQPASAQSTPSSTPHSSPKHRPRGWFTSGSSTALPGPNPGTMDSGSGDKDRNPSDKWSFFGTRPLQKYDSGSFATQAYRGAQKPSPMELIRAQATRMAEDPATFKPPKMDVPVMEGKTQPPRTHSLKPRDLNVLTPTGF
SIO_010081: KIAA1191
subclass of: SO_0000673
so part of: KIAA1191
location: complement(join(6122818..6123026,6123138..6123280,6123464..6123570,6125652..6125776,6128922..6129048,6146242..6146391))
location: region:6122818-6146391:-1
so has part: feature:6146242-6146391:-1:exon
so has part: feature:6128922-6129048:-1:exon
so has part: feature:6125652-6125776:-1:exon
so has part: feature:6123464-6123570:-1:exon
so has part: feature:6123138-6123280:-1:exon
so has part: feature:6122818-6123026:-1:exon

XP_012636990.2
type: Protein
SIO_000068: ncbiprotein

position:6146391:-1
position: 6146391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6146242-6146391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6128922-6129048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6125652-6125776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6123464-6123570:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6123138-6123280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6122818-6123026:-1:exon

KIAA1191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: KIAA1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative monooxygenase p33MONOX isoform X2
translation: MTLPSATDSVDKVPVVKAKATHVIMNSLVTKQTQESIQRFEQQAGLRDAGYTPHKGLTTEESKYLRVAEALHKLKLQSGEITKEEKQPASAQSTPSSTPHSSPKHRPRGWFTSGSSTALPGPNPGTMDSGSGDKDRNPSDKWSFFGTRPLQKYDSGSFATQAYRGAQKPSPMELIRAQATRMAEDPATFKPPKMDVPVMEGKTQPPRTHSLKPRDLNVLTPTGF
SIO_010081: KIAA1191
subclass of: SO_0000673
so part of: KIAA1191
location: complement(join(6122818..6123026,6123138..6123280,6123464..6123570,6125652..6125776,6128922..6129012))
location: region:6122818-6129012:-1
so has part: feature:6128922-6129012:-1:exon
so has part: feature:6125652-6125776:-1:exon
so has part: feature:6123464-6123570:-1:exon
so has part: feature:6123138-6123280:-1:exon
so has part: feature:6122818-6123026:-1:exon

XP_020139873.1
type: Protein
SIO_000068: ncbiprotein

position:6129012:-1
position: 6129012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6128922-6129012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125652-6125776:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6123464-6123570:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6123138-6123280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6122818-6123026:-1:exon

KIAA1191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: KIAA1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative monooxygenase p33MONOX isoform X2
translation: MTLPSATDSVDKVPVVKAKATHVIMNSLVTKQTQESIQRFEQQAGLRDAGYTPHKGLTTEESKYLRVAEALHKLKLQSGEITKEEKQPASAQSTPSSTPHSSPKHRPRGWFTSGSSTALPGPNPGTMDSGSGDKDRNPSDKWSFFGTRPLQKYDSGSFATQAYRGAQKPSPMELIRAQATRMAEDPATFKPPKMDVPVMEGKTQPPRTHSLKPRDLNVLTPTGF
SIO_010081: KIAA1191
subclass of: SO_0000673
so part of: KIAA1191
location: complement(join(6122818..6123026,6123138..6123280,6123464..6123570,6125652..6125776,6128922..6129012))
location: region:6122818-6129012:-1
so has part: feature:6128922-6129012:-1:exon
so has part: feature:6125652-6125776:-1:exon
so has part: feature:6123464-6123570:-1:exon
so has part: feature:6123138-6123280:-1:exon
so has part: feature:6122818-6123026:-1:exon

XP_012636988.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6128922-6129012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125652-6125776:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6123464-6123570:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6123138-6123280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6122818-6123026:-1:exon

KIAA1191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: KIAA1191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative monooxygenase p33MONOX isoform X2
translation: MTLPSATDSVDKVPVVKAKATHVIMNSLVTKQTQESIQRFEQQAGLRDAGYTPHKGLTTEESKYLRVAEALHKLKLQSGEITKEEKQPASAQSTPSSTPHSSPKHRPRGWFTSGSSTALPGPNPGTMDSGSGDKDRNPSDKWSFFGTRPLQKYDSGSFATQAYRGAQKPSPMELIRAQATRMAEDPATFKPPKMDVPVMEGKTQPPRTHSLKPRDLNVLTPTGF
SIO_010081: KIAA1191
subclass of: SO_0000673
so part of: KIAA1191
location: complement(join(6122818..6123026,6123138..6123280,6123464..6123570,6125652..6125776,6128922..6129012))
location: region:6122818-6129012:-1
so has part: feature:6128922-6129012:-1:exon
so has part: feature:6125652-6125776:-1:exon
so has part: feature:6123464-6123570:-1:exon
so has part: feature:6123138-6123280:-1:exon
so has part: feature:6122818-6123026:-1:exon

XP_012636989.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6128922-6129012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6125652-6125776:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6123464-6123570:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6123138-6123280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6122818-6123026:-1:exon

ARL10
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: ARL10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6151879..6170528
location: region:6151879-6170528:1
so has part: feature:6151879-6170528:1:exon
subclass of: SO_0000010

105880454
type: Gene
SIO_000068: ncbigene

position:6151879:1
position: 6151879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6170528:1
position: 6170528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6151879-6170528:1:exon

ARL10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: ARL10
product: ADP ribosylation factor like GTPase 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284219.1
SIO_010081: ARL10
subclass of: SO_0000673
so part of: ARL10
location: join(6151879..6152062,6153236..6153490,6163592..6163767,6169356..6170528)
location: region:6151879-6170528:1
so has part: feature:6151879-6152062:1:exon
so has part: feature:6153236-6153490:1:exon
so has part: feature:6163592-6163767:1:exon
so has part: feature:6169356-6170528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6151879-6152062:1:exon

position:6152062:1
position: 6152062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6153236-6153490:1:exon

position:6153236:1
position: 6153236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6153490:1
position: 6153490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6163592-6163767:1:exon

position:6163592:1
position: 6163592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6163767:1
position: 6163767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6169356-6170528:1:exon

position:6169356:1
position: 6169356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARL10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: ARL10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 10
translation: MPPVAETHRAQPQCTAASPQDAGPHYEPHNGTPPSPLARGLFWYLLILPEGKWAGVAPQFTGPGWRWPAGCSLTSAPQQPEYEEDEEPALEGLEQREVLVLGLDGSGKSTFLRVLSGKPALEGHVPTWGFNSVRLSCRDFQVDLLEIGGSQNLRFYWKEFVNEVDVLVFVVDSADRPRLPWARQELHKLLDRDPDLPVVIVANKQDLSEAVSVVELQRELGLQAVNSQREVFLLGASIAPEGPAGEPGTVHIWKLLLELLS
SIO_010081: ARL10
subclass of: SO_0000673
so part of: ARL10
location: join(6151879..6152062,6153236..6153490,6163592..6163767,6169356..6169526)
location: region:6151879-6169526:1
so has part: feature:6151879-6152062:1:exon
so has part: feature:6153236-6153490:1:exon
so has part: feature:6163592-6163767:1:exon
so has part: feature:6169356-6169526:1:exon

XP_020139808.1
type: Protein
SIO_000068: ncbiprotein

position:6169526:1
position: 6169526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6151879-6152062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6153236-6153490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6163592-6163767:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6169356-6169526:1:exon

NOP16
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: NOP16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6174726..6187179)
location: region:6174726-6187179:-1
so has part: feature:6174726-6187179:-1:exon
subclass of: SO_0000010

105880465
type: Gene
SIO_000068: ncbigene

position:6174726:-1
position: 6174726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6187179:-1
position: 6187179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6174726-6187179:-1:exon

NOP16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NOP16
product: NOP16 nucleolar protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 9 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284285.1
SIO_010081: NOP16
subclass of: SO_0000673
so part of: NOP16
location: complement(join(6174726..6175153,6176066..6176172,6177995..6178064,6179873..6179947,6185620..6185656,6187008..6187179))
location: region:6174726-6187179:-1
so has part: feature:6187008-6187179:-1:exon
so has part: feature:6185620-6185656:-1:exon
so has part: feature:6179873-6179947:-1:exon
so has part: feature:6177995-6178064:-1:exon
so has part: feature:6176066-6176172:-1:exon
so has part: feature:6174726-6175153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6187008-6187179:-1:exon

position:6187008:-1
position: 6187008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6185620-6185656:-1:exon

position:6185620:-1
position: 6185620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6185656:-1
position: 6185656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6179873-6179947:-1:exon

position:6179873:-1
position: 6179873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6179947:-1
position: 6179947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6177995-6178064:-1:exon

position:6177995:-1
position: 6177995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6178064:-1
position: 6178064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6176066-6176172:-1:exon

position:6176066:-1
position: 6176066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6176172:-1
position: 6176172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6174726-6175153:-1:exon

position:6175153:-1
position: 6175153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NOP16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: NOP16
product: NOP16 nucleolar protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012781528.2
SIO_010081: NOP16
subclass of: SO_0000673
so part of: NOP16
location: complement(join(6174726..6175153,6176066..6176172,6177995..6178064,6179873..6179969,6186848..6186859,6187008..6187179))
location: region:6174726-6187179:-1
so has part: feature:6187008-6187179:-1:exon
so has part: feature:6186848-6186859:-1:exon
so has part: feature:6179873-6179969:-1:exon
so has part: feature:6177995-6178064:-1:exon
so has part: feature:6176066-6176172:-1:exon
so has part: feature:6174726-6175153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6187008-6187179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6186848-6186859:-1:exon

position:6186848:-1
position: 6186848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6186859:-1
position: 6186859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6179873-6179969:-1:exon

position:6179969:-1
position: 6179969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6177995-6178064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6176066-6176172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6174726-6175153:-1:exon

NOP16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NOP16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein 16 isoform X2
translation: MPKAKGKTRRQKFGYNVNRKRLNRNARRKAAPRIECSHIRHAWDHGKSSVRQNLAEMGLAVDPNRALPLRKRKVKAMEVDLEERPKELVRKPYVLNDLEAEASLPEKKGNTLSRDLIDYVRYMVENHGEDYKAMARDEKNYYQDTPKQIRNKINVYKRFYPAEWQAFVDSLQKSKMEVD
SIO_010081: NOP16
subclass of: SO_0000673
so part of: NOP16
location: complement(join(6175010..6175153,6176066..6176172,6177995..6178064,6179873..6179947,6185620..6185656,6187008..6187114))
location: region:6175010-6187114:-1
so has part: feature:6187008-6187114:-1:exon
so has part: feature:6185620-6185656:-1:exon
so has part: feature:6179873-6179947:-1:exon
so has part: feature:6177995-6178064:-1:exon
so has part: feature:6176066-6176172:-1:exon
so has part: feature:6175010-6175153:-1:exon

XP_020139874.1
type: Protein
SIO_000068: ncbiprotein

position:6175010:-1
position: 6175010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6187114:-1
position: 6187114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6187008-6187114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6185620-6185656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6179873-6179947:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6177995-6178064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6176066-6176172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6175010-6175153:-1:exon

NOP16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: NOP16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein 16 isoform X1
translation: MPKAKGKTRRQKFGYNVNRKRLNRNARRKAAPRIECSHIRHAWDHGKSVRQNLAEMGLAVDPNRALPLRKRKVKAMEVDLEERPKELVRKPYVLNDLEAEASLPEKKGNTLSRDLIDYVRYMVENHGEDYKAMARDEKNYYQDTPKQIRNKINVYKRFYPAEWQAFVDSLQKSKMEVD
SIO_010081: NOP16
subclass of: SO_0000673
so part of: NOP16
location: complement(join(6175010..6175153,6176066..6176172,6177995..6178064,6179873..6179969,6186848..6186859,6187008..6187114))
location: region:6175010-6187114:-1
so has part: feature:6187008-6187114:-1:exon
so has part: feature:6186848-6186859:-1:exon
so has part: feature:6179873-6179969:-1:exon
so has part: feature:6177995-6178064:-1:exon
so has part: feature:6176066-6176172:-1:exon
so has part: feature:6175010-6175153:-1:exon

XP_012636982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6187008-6187114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6186848-6186859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6179873-6179969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6177995-6178064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6176066-6176172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6175010-6175153:-1:exon

HIGD2A
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: HIGD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6187083..6188274
location: region:6187083-6188274:1
so has part: feature:6187083-6188274:1:exon
subclass of: SO_0000010

105880467
type: Gene
SIO_000068: ncbigene

position:6187083:1
position: 6187083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6188274:1
position: 6188274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6187083-6188274:1:exon

HIGD2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: HIGD2A
product: HIG1 hypoxia inducible domain family member 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012781529.2
SIO_010081: HIGD2A
subclass of: SO_0000673
so part of: HIGD2A
location: join(6187083..6187540,6187869..6188274)
location: region:6187083-6188274:1
so has part: feature:6187083-6187540:1:exon
so has part: feature:6187869-6188274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6187083-6187540:1:exon

position:6187540:1
position: 6187540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6187869-6188274:1:exon

position:6187869:1
position: 6187869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HIGD2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: HIGD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HIG1 domain family member 2A, mitochondrial
translation: MAAPGPVTTEAPCEPSQPPVIEGFSPTVYRNPEGFKEKFLRKTRENPMVPIGCLGTAAALSYGLYSFHRGDSQRSQLMMRTRIAAQGFTVTAILLGLAASAMKSRP
SIO_010081: HIGD2A
subclass of: SO_0000673
so part of: HIGD2A
location: join(6187387..6187540,6187869..6188035)
location: region:6187387-6188035:1
so has part: feature:6187387-6187540:1:exon
so has part: feature:6187869-6188035:1:exon

XP_012636983.1
type: Protein
SIO_000068: ncbiprotein

position:6187387:1
position: 6187387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6188035:1
position: 6188035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6187387-6187540:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6187869-6188035:1:exon

CLTB
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: CLTB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6191038..6212101)
location: region:6191038-6212101:-1
so has part: feature:6191038-6212101:-1:exon
subclass of: SO_0000010

105880464
type: Gene
SIO_000068: ncbigene

position:6191038:-1
position: 6191038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6212101:-1
position: 6212101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6191038-6212101:-1:exon

CLTB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CLTB
product: clathrin light chain B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_012781526.2
SIO_010081: CLTB
subclass of: SO_0000673
so part of: CLTB
location: complement(join(6191038..6191504,6195534..6195587,6197410..6197521,6197721..6197838,6205871..6205917,6211831..6212101))
location: region:6191038-6212101:-1
so has part: feature:6211831-6212101:-1:exon
so has part: feature:6205871-6205917:-1:exon
so has part: feature:6197721-6197838:-1:exon
so has part: feature:6197410-6197521:-1:exon
so has part: feature:6195534-6195587:-1:exon
so has part: feature:6191038-6191504:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6211831-6212101:-1:exon

position:6211831:-1
position: 6211831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6205871-6205917:-1:exon

position:6205871:-1
position: 6205871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6205917:-1
position: 6205917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6197721-6197838:-1:exon

position:6197721:-1
position: 6197721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6197838:-1
position: 6197838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6197410-6197521:-1:exon

position:6197410:-1
position: 6197410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6197521:-1
position: 6197521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6195534-6195587:-1:exon

position:6195534:-1
position: 6195534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6195587:-1
position: 6195587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6191038-6191504:-1:exon

position:6191504:-1
position: 6191504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLTB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CLTB
product: clathrin light chain B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_012781527.2
SIO_010081: CLTB
subclass of: SO_0000673
so part of: CLTB
location: complement(join(6191038..6191504,6197410..6197521,6197721..6197838,6205871..6205917,6211831..6212098))
location: region:6191038-6212098:-1
so has part: feature:6211831-6212098:-1:exon
so has part: feature:6205871-6205917:-1:exon
so has part: feature:6197721-6197838:-1:exon
so has part: feature:6197410-6197521:-1:exon
so has part: feature:6191038-6191504:-1:exon

position:6212098:-1
position: 6212098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6211831-6212098:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6205871-6205917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6197721-6197838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6197410-6197521:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6191038-6191504:-1:exon

CLTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CLTB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clathrin light chain B isoform X2
translation: MADDFGFFASPESGAPAALEEDPAAAFLAQQESEIAGIENDEGFAAPARGQSGPGSAAGSEDSGTAVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQKKRLQELDAASKVTEQEWREKAKRDLEEWNQRQSEQVERNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR
SIO_010081: CLTB
subclass of: SO_0000673
so part of: CLTB
location: complement(join(6191333..6191504,6197410..6197521,6197721..6197838,6205871..6205917,6211831..6212002))
location: region:6191333-6212002:-1
so has part: feature:6211831-6212002:-1:exon
so has part: feature:6205871-6205917:-1:exon
so has part: feature:6197721-6197838:-1:exon
so has part: feature:6197410-6197521:-1:exon
so has part: feature:6191333-6191504:-1:exon

XP_012636981.1
type: Protein
SIO_000068: ncbiprotein

position:6191333:-1
position: 6191333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6212002:-1
position: 6212002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6211831-6212002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6205871-6205917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6197721-6197838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6197410-6197521:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6191333-6191504:-1:exon

CLTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CLTB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clathrin light chain B isoform X1
translation: MADDFGFFASPESGAPAALEEDPAAAFLAQQESEIAGIENDEGFAAPARGQSGPGSAAGSEDSGTAVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQKKRLQELDAASKVTEQEWREKAKRDLEEWNQRQSEQVERNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR
SIO_010081: CLTB
subclass of: SO_0000673
so part of: CLTB
location: complement(join(6191333..6191504,6195534..6195587,6197410..6197521,6197721..6197838,6205871..6205917,6211831..6212002))
location: region:6191333-6212002:-1
so has part: feature:6211831-6212002:-1:exon
so has part: feature:6205871-6205917:-1:exon
so has part: feature:6197721-6197838:-1:exon
so has part: feature:6197410-6197521:-1:exon
so has part: feature:6195534-6195587:-1:exon
so has part: feature:6191333-6191504:-1:exon

XP_012636980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6211831-6212002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6205871-6205917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6197721-6197838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6197410-6197521:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6195534-6195587:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6191333-6191504:-1:exon

FAF2
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: FAF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6224546..6271970
location: region:6224546-6271970:1
so has part: feature:6224546-6271970:1:exon
subclass of: SO_0000010

105880463
type: Gene
SIO_000068: ncbigene

position:6224546:1
position: 6224546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6271970:1
position: 6271970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6224546-6271970:1:exon

FAF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FAF2
product: Fas associated factor family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 114 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012781524.2
SIO_010081: FAF2
subclass of: SO_0000673
so part of: FAF2
location: join(6224546..6224670,6240325..6240393,6248210..6248344,6250774..6250850,6253331..6253469,6255358..6255443,6255533..6255624,6258300..6258477,6261200..6261371,6261975..6262118,6268792..6271970)
location: region:6224546-6271970:1
so has part: feature:6224546-6224670:1:exon
so has part: feature:6240325-6240393:1:exon
so has part: feature:6248210-6248344:1:exon
so has part: feature:6250774-6250850:1:exon
so has part: feature:6253331-6253469:1:exon
so has part: feature:6255358-6255443:1:exon
so has part: feature:6255533-6255624:1:exon
so has part: feature:6258300-6258477:1:exon
so has part: feature:6261200-6261371:1:exon
so has part: feature:6261975-6262118:1:exon
so has part: feature:6268792-6271970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6224546-6224670:1:exon

position:6224670:1
position: 6224670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6240325-6240393:1:exon

position:6240325:1
position: 6240325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6240393:1
position: 6240393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6248210-6248344:1:exon

position:6248210:1
position: 6248210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6248344:1
position: 6248344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6250774-6250850:1:exon

position:6250774:1
position: 6250774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6250850:1
position: 6250850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6253331-6253469:1:exon

position:6253331:1
position: 6253331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6253469:1
position: 6253469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6255358-6255443:1:exon

position:6255358:1
position: 6255358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6255443:1
position: 6255443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6255533-6255624:1:exon

position:6255533:1
position: 6255533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6255624:1
position: 6255624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6258300-6258477:1:exon

position:6258300:1
position: 6258300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6258477:1
position: 6258477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6261200-6261371:1:exon

position:6261200:1
position: 6261200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6261371:1
position: 6261371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6261975-6262118:1:exon

position:6261975:1
position: 6261975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6262118:1
position: 6262118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6268792-6271970:1:exon

position:6268792:1
position: 6268792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FAF2
product: Fas associated factor family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 158 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_012781523.1
SIO_010081: FAF2
subclass of: SO_0000673
so part of: FAF2
location: join(6224703..6224942,6240325..6240393,6248210..6248344,6250774..6250850,6253331..6253469,6255358..6255443,6255533..6255624,6258300..6258477,6261200..6261371,6261975..6262118,6268792..6271970)
location: region:6224703-6271970:1
so has part: feature:6224703-6224942:1:exon
so has part: feature:6240325-6240393:1:exon
so has part: feature:6248210-6248344:1:exon
so has part: feature:6250774-6250850:1:exon
so has part: feature:6253331-6253469:1:exon
so has part: feature:6255358-6255443:1:exon
so has part: feature:6255533-6255624:1:exon
so has part: feature:6258300-6258477:1:exon
so has part: feature:6261200-6261371:1:exon
so has part: feature:6261975-6262118:1:exon
so has part: feature:6268792-6271970:1:exon

position:6224703:1
position: 6224703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6224703-6224942:1:exon

position:6224942:1
position: 6224942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6240325-6240393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6248210-6248344:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6250774-6250850:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6253331-6253469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6255358-6255443:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6255533-6255624:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6258300-6258477:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6261200-6261371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6261975-6262118:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6268792-6271970:1:exon

FAF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: FAF2
product: Fas associated factor family member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 114 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012781525.2
SIO_010081: FAF2
subclass of: SO_0000673
so part of: FAF2
location: join(6224861..6224942,6238583..6238721,6240325..6240393,6248210..6248344,6250774..6250850,6253331..6253469,6255358..6255443,6255533..6255624,6258300..6258477,6261200..6261371,6261975..6262118,6268792..6271970)
location: region:6224861-6271970:1
so has part: feature:6224861-6224942:1:exon
so has part: feature:6238583-6238721:1:exon
so has part: feature:6240325-6240393:1:exon
so has part: feature:6248210-6248344:1:exon
so has part: feature:6250774-6250850:1:exon
so has part: feature:6253331-6253469:1:exon
so has part: feature:6255358-6255443:1:exon
so has part: feature:6255533-6255624:1:exon
so has part: feature:6258300-6258477:1:exon
so has part: feature:6261200-6261371:1:exon
so has part: feature:6261975-6262118:1:exon
so has part: feature:6268792-6271970:1:exon

position:6224861:1
position: 6224861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6224861-6224942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6238583-6238721:1:exon

position:6238583:1
position: 6238583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6238721:1
position: 6238721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6240325-6240393:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6248210-6248344:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6250774-6250850:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6253331-6253469:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6255358-6255443:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6255533-6255624:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6258300-6258477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6261200-6261371:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6261975-6262118:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6268792-6271970:1:exon

FAF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FAF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAS-associated factor 2 isoform X1
translation: MAAPEERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEGVPSVFNPPPSRPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRFIRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKDRRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLASLRADQEKERKKREERERKRRKEEEVQQQKLAEERRRRNLQEEKERKLECLPPEPSPDDPDSVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEWPNPPTLQEAGLSHTEVLFVQDLTDE
SIO_010081: FAF2
subclass of: SO_0000673
so part of: FAF2
location: join(6224880..6224942,6240325..6240393,6248210..6248344,6250774..6250850,6253331..6253469,6255358..6255443,6255533..6255624,6258300..6258477,6261200..6261371,6261975..6262118,6268792..6268974)
location: region:6224880-6268974:1
so has part: feature:6224880-6224942:1:exon
so has part: feature:6240325-6240393:1:exon
so has part: feature:6248210-6248344:1:exon
so has part: feature:6250774-6250850:1:exon
so has part: feature:6253331-6253469:1:exon
so has part: feature:6255358-6255443:1:exon
so has part: feature:6255533-6255624:1:exon
so has part: feature:6258300-6258477:1:exon
so has part: feature:6261200-6261371:1:exon
so has part: feature:6261975-6262118:1:exon
so has part: feature:6268792-6268974:1:exon

XP_012636977.1
type: Protein
SIO_000068: ncbiprotein

position:6224880:1
position: 6224880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6268974:1
position: 6268974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6224880-6224942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6240325-6240393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6248210-6248344:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6250774-6250850:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6253331-6253469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6255358-6255443:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6255533-6255624:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6258300-6258477:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6261200-6261371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6261975-6262118:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6268792-6268974:1:exon

FAF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FAF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAS-associated factor 2 isoform X2
translation: MDQCRHTLEQHNWNIEAAVQDRLNEQEGVPSVFNPPPSRPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRFIRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKDRRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLASLRADQEKERKKREERERKRRKEEEVQQQKLAEERRRRNLQEEKERKLECLPPEPSPDDPDSVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEWPNPPTLQEAGLSHTEVLFVQDLTDE
SIO_010081: FAF2
subclass of: SO_0000673
so part of: FAF2
location: join(6240346..6240393,6248210..6248344,6250774..6250850,6253331..6253469,6255358..6255443,6255533..6255624,6258300..6258477,6261200..6261371,6261975..6262118,6268792..6268974)
location: region:6240346-6268974:1
so has part: feature:6240346-6240393:1:exon
so has part: feature:6248210-6248344:1:exon
so has part: feature:6250774-6250850:1:exon
so has part: feature:6253331-6253469:1:exon
so has part: feature:6255358-6255443:1:exon
so has part: feature:6255533-6255624:1:exon
so has part: feature:6258300-6258477:1:exon
so has part: feature:6261200-6261371:1:exon
so has part: feature:6261975-6262118:1:exon
so has part: feature:6268792-6268974:1:exon

XP_012636978.1
type: Protein
SIO_000068: ncbiprotein

position:6240346:1
position: 6240346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6240346-6240393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6248210-6248344:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6250774-6250850:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6253331-6253469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6255358-6255443:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6255533-6255624:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6258300-6258477:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6261200-6261371:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6261975-6262118:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6268792-6268974:1:exon

FAF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: FAF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAS-associated factor 2 isoform X2
translation: MDQCRHTLEQHNWNIEAAVQDRLNEQEGVPSVFNPPPSRPLQVNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRFIRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKDRRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLASLRADQEKERKKREERERKRRKEEEVQQQKLAEERRRRNLQEEKERKLECLPPEPSPDDPDSVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEWPNPPTLQEAGLSHTEVLFVQDLTDE
SIO_010081: FAF2
subclass of: SO_0000673
so part of: FAF2
location: join(6240346..6240393,6248210..6248344,6250774..6250850,6253331..6253469,6255358..6255443,6255533..6255624,6258300..6258477,6261200..6261371,6261975..6262118,6268792..6268974)
location: region:6240346-6268974:1
so has part: feature:6240346-6240393:1:exon
so has part: feature:6248210-6248344:1:exon
so has part: feature:6250774-6250850:1:exon
so has part: feature:6253331-6253469:1:exon
so has part: feature:6255358-6255443:1:exon
so has part: feature:6255533-6255624:1:exon
so has part: feature:6258300-6258477:1:exon
so has part: feature:6261200-6261371:1:exon
so has part: feature:6261975-6262118:1:exon
so has part: feature:6268792-6268974:1:exon

XP_012636979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6240346-6240393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6248210-6248344:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6250774-6250850:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6253331-6253469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6255358-6255443:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6255533-6255624:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6258300-6258477:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6261200-6261371:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6261975-6262118:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6268792-6268974:1:exon

RNF44
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: RNF44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6291561..6318205)
location: region:6291561-6318205:-1
so has part: feature:6291561-6318205:-1:exon
subclass of: SO_0000010

105880461
type: Gene
SIO_000068: ncbigene

position:6291561:-1
position: 6291561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6318205:-1
position: 6318205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6291561-6318205:-1:exon

RNF44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RNF44
product: ring finger protein 44, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012781517.2
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6291561..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301777,6301936..6302086,6302623..6302964,6307051..6307194))
location: region:6291561-6307194:-1
so has part: feature:6307051-6307194:-1:exon
so has part: feature:6302623-6302964:-1:exon
so has part: feature:6301936-6302086:-1:exon
so has part: feature:6301558-6301777:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6291561-6293912:-1:exon

position:6307194:-1
position: 6307194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6307051-6307194:-1:exon

position:6307051:-1
position: 6307051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6302623-6302964:-1:exon

position:6302623:-1
position: 6302623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6302964:-1
position: 6302964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6301936-6302086:-1:exon

position:6301936:-1
position: 6301936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6302086:-1
position: 6302086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6301558-6301777:-1:exon

position:6301558:-1
position: 6301558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6301777:-1
position: 6301777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6301019-6301186:-1:exon

position:6301019:-1
position: 6301019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6301186:-1
position: 6301186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6300412-6300585:-1:exon

position:6300412:-1
position: 6300412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6300585:-1
position: 6300585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6300159-6300320:-1:exon

position:6300159:-1
position: 6300159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6300320:-1
position: 6300320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6299948-6300072:-1:exon

position:6299948:-1
position: 6299948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6300072:-1
position: 6300072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6294514-6294601:-1:exon

position:6294514:-1
position: 6294514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6294601:-1
position: 6294601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6294310-6294431:-1:exon

position:6294310:-1
position: 6294310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6294431:-1
position: 6294431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6294109-6294208:-1:exon

position:6294109:-1
position: 6294109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6294208:-1
position: 6294208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6291561-6293912:-1:exon

position:6293912:-1
position: 6293912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RNF44
product: ring finger protein 44, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012781516.1
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293650..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301777,6301936..6302086,6318158..6318205))
location: region:6293650-6318205:-1
so has part: feature:6318158-6318205:-1:exon
so has part: feature:6301936-6302086:-1:exon
so has part: feature:6301558-6301777:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293650-6293912:-1:exon

position:6293650:-1
position: 6293650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6318158-6318205:-1:exon

position:6318158:-1
position: 6318158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6301936-6302086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301558-6301777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6293650-6293912:-1:exon

RNF44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RNF44
product: ring finger protein 44, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012781521.1
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293650..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301686,6301936..6302086,6307051..6307354))
location: region:6293650-6307354:-1
so has part: feature:6307051-6307354:-1:exon
so has part: feature:6301936-6302086:-1:exon
so has part: feature:6301558-6301686:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293650-6293912:-1:exon

position:6307354:-1
position: 6307354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6307051-6307354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6301936-6302086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301558-6301686:-1:exon

position:6301686:-1
position: 6301686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6293650-6293912:-1:exon

RNF44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RNF44
product: ring finger protein 44, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012781520.2
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293650..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301747,6301936..6302086,6307051..6307243))
location: region:6293650-6307243:-1
so has part: feature:6307051-6307243:-1:exon
so has part: feature:6301936-6302086:-1:exon
so has part: feature:6301558-6301747:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293650-6293912:-1:exon

position:6307243:-1
position: 6307243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6307051-6307243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6301936-6302086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301558-6301747:-1:exon

position:6301747:-1
position: 6301747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6293650-6293912:-1:exon

RNF44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RNF44
product: ring finger protein 44, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012781514.1
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293650..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301777,6301936..6302086,6307051..6307195))
location: region:6293650-6307195:-1
so has part: feature:6307051-6307195:-1:exon
so has part: feature:6301936-6302086:-1:exon
so has part: feature:6301558-6301777:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293650-6293912:-1:exon

position:6307195:-1
position: 6307195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6307051-6307195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6301936-6302086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301558-6301777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6293650-6293912:-1:exon

RNF44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RNF44
product: ring finger protein 44, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_020284247.1
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293650..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301777,6301936..6302086,6302623..6302961,6307051..6307194))
location: region:6293650-6307194:-1
so has part: feature:6307051-6307194:-1:exon
so has part: feature:6302623-6302961:-1:exon
so has part: feature:6301936-6302086:-1:exon
so has part: feature:6301558-6301777:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293650-6293912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6307051-6307194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6302623-6302961:-1:exon

position:6302961:-1
position: 6302961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6301936-6302086:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6301558-6301777:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6293650-6293912:-1:exon

RNF44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RNF44
product: ring finger protein 44, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012781518.1
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293650..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301747,6301936..6302086,6302623..6302964,6307051..6307193))
location: region:6293650-6307193:-1
so has part: feature:6307051-6307193:-1:exon
so has part: feature:6302623-6302964:-1:exon
so has part: feature:6301936-6302086:-1:exon
so has part: feature:6301558-6301747:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293650-6293912:-1:exon

position:6307193:-1
position: 6307193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6307051-6307193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6302623-6302964:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301936-6302086:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6301558-6301747:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6293650-6293912:-1:exon

RNF44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RNF44
product: ring finger protein 44, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012781515.2
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293650..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301777,6301936..6302086,6306234..6307037))
location: region:6293650-6307037:-1
so has part: feature:6306234-6307037:-1:exon
so has part: feature:6301936-6302086:-1:exon
so has part: feature:6301558-6301777:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293650-6293912:-1:exon

position:6307037:-1
position: 6307037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6306234-6307037:-1:exon

position:6306234:-1
position: 6306234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6301936-6302086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301558-6301777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6293650-6293912:-1:exon

RNF44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RNF44
product: ring finger protein 44, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012781512.2
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293650..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301777,6301936..6302086,6302623..6302961,6306234..6307036))
location: region:6293650-6307036:-1
so has part: feature:6306234-6307036:-1:exon
so has part: feature:6302623-6302961:-1:exon
so has part: feature:6301936-6302086:-1:exon
so has part: feature:6301558-6301777:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293650-6293912:-1:exon

position:6307036:-1
position: 6307036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6306234-6307036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6302623-6302961:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301936-6302086:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6301558-6301777:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6293650-6293912:-1:exon

RNF44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RNF44
product: ring finger protein 44, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012781513.2
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293650..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301777,6301936..6302086,6302623..6302964,6306234..6307036))
location: region:6293650-6307036:-1
so has part: feature:6306234-6307036:-1:exon
so has part: feature:6302623-6302964:-1:exon
so has part: feature:6301936-6302086:-1:exon
so has part: feature:6301558-6301777:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293650-6293912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6306234-6307036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6302623-6302964:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301936-6302086:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6301558-6301777:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6293650-6293912:-1:exon

RNF44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RNF44
product: ring finger protein 44, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012781522.1
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293650..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301683,6301936..6302086))
location: region:6293650-6302086:-1
so has part: feature:6301936-6302086:-1:exon
so has part: feature:6301558-6301683:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293650-6293912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6301936-6302086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6301558-6301683:-1:exon

position:6301683:-1
position: 6301683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6293650-6293912:-1:exon

RNF44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RNF44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X2
translation: MQPWALAVTRWPPCVPVGHRRFSAGPGSAPGQLRGSPGREGPPASLPAQHERFPSQQPLPRAPHLPVEQHRAVAPAGGSPRMLHPAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLLQACTMQQLPVPYQAFPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRADQHPLGGFTYSTSAPGPALSPPVPLHYLPHDPLHQELSFGVPYSHVMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSRQSEQTLCVICFSDFEARQLLRVLPCSHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293850..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301747,6301936..6302042))
location: region:6293850-6302042:-1
so has part: feature:6301936-6302042:-1:exon
so has part: feature:6301558-6301747:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293850-6293912:-1:exon

XP_012636972.1
type: Protein
SIO_000068: ncbiprotein

position:6293850:-1
position: 6293850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6302042:-1
position: 6302042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6301936-6302042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6301558-6301747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6293850-6293912:-1:exon

RNF44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RNF44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X2
translation: MQPWALAVTRWPPCVPVGHRRFSAGPGSAPGQLRGSPGREGPPASLPAQHERFPSQQPLPRAPHLPVEQHRAVAPAGGSPRMLHPAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLLQACTMQQLPVPYQAFPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRADQHPLGGFTYSTSAPGPALSPPVPLHYLPHDPLHQELSFGVPYSHVMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSRQSEQTLCVICFSDFEARQLLRVLPCSHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293850..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301747,6301936..6302042))
location: region:6293850-6302042:-1
so has part: feature:6301936-6302042:-1:exon
so has part: feature:6301558-6301747:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293850-6293912:-1:exon

XP_012636974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6301936-6302042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6301558-6301747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6293850-6293912:-1:exon

RNF44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RNF44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X1
translation: MQPWALAVTRWPPCVPVGHRRFSAGPGSAPGQLRGSPIRASSLWRSPGREGPPASLPAQHERFPSQQPLPRAPHLPVEQHRAVAPAGGSPRMLHPAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLLQACTMQQLPVPYQAFPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRADQHPLGGFTYSTSAPGPALSPPVPLHYLPHDPLHQELSFGVPYSHVMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSRQSEQTLCVICFSDFEARQLLRVLPCSHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293850..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301777,6301936..6302042))
location: region:6293850-6302042:-1
so has part: feature:6301936-6302042:-1:exon
so has part: feature:6301558-6301777:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293850-6293912:-1:exon

XP_020139836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6301936-6302042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6301558-6301777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6293850-6293912:-1:exon

RNF44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RNF44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X1
translation: MQPWALAVTRWPPCVPVGHRRFSAGPGSAPGQLRGSPIRASSLWRSPGREGPPASLPAQHERFPSQQPLPRAPHLPVEQHRAVAPAGGSPRMLHPAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLLQACTMQQLPVPYQAFPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRADQHPLGGFTYSTSAPGPALSPPVPLHYLPHDPLHQELSFGVPYSHVMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSRQSEQTLCVICFSDFEARQLLRVLPCSHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293850..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301777,6301936..6302042))
location: region:6293850-6302042:-1
so has part: feature:6301936-6302042:-1:exon
so has part: feature:6301558-6301777:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293850-6293912:-1:exon

XP_012636966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6301936-6302042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6301558-6301777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6293850-6293912:-1:exon

RNF44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RNF44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X1
translation: MQPWALAVTRWPPCVPVGHRRFSAGPGSAPGQLRGSPIRASSLWRSPGREGPPASLPAQHERFPSQQPLPRAPHLPVEQHRAVAPAGGSPRMLHPAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLLQACTMQQLPVPYQAFPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRADQHPLGGFTYSTSAPGPALSPPVPLHYLPHDPLHQELSFGVPYSHVMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSRQSEQTLCVICFSDFEARQLLRVLPCSHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293850..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301777,6301936..6302042))
location: region:6293850-6302042:-1
so has part: feature:6301936-6302042:-1:exon
so has part: feature:6301558-6301777:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293850-6293912:-1:exon

XP_012636967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6301936-6302042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6301558-6301777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6293850-6293912:-1:exon

RNF44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RNF44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X1
translation: MQPWALAVTRWPPCVPVGHRRFSAGPGSAPGQLRGSPIRASSLWRSPGREGPPASLPAQHERFPSQQPLPRAPHLPVEQHRAVAPAGGSPRMLHPAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLLQACTMQQLPVPYQAFPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRADQHPLGGFTYSTSAPGPALSPPVPLHYLPHDPLHQELSFGVPYSHVMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSRQSEQTLCVICFSDFEARQLLRVLPCSHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293850..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301777,6301936..6302042))
location: region:6293850-6302042:-1
so has part: feature:6301936-6302042:-1:exon
so has part: feature:6301558-6301777:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293850-6293912:-1:exon

XP_012636968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6301936-6302042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6301558-6301777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6293850-6293912:-1:exon

RNF44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RNF44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X1
translation: MQPWALAVTRWPPCVPVGHRRFSAGPGSAPGQLRGSPIRASSLWRSPGREGPPASLPAQHERFPSQQPLPRAPHLPVEQHRAVAPAGGSPRMLHPAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLLQACTMQQLPVPYQAFPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRADQHPLGGFTYSTSAPGPALSPPVPLHYLPHDPLHQELSFGVPYSHVMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSRQSEQTLCVICFSDFEARQLLRVLPCSHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293850..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301777,6301936..6302042))
location: region:6293850-6302042:-1
so has part: feature:6301936-6302042:-1:exon
so has part: feature:6301558-6301777:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293850-6293912:-1:exon

XP_012636969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6301936-6302042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6301558-6301777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6293850-6293912:-1:exon

RNF44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RNF44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X1
translation: MQPWALAVTRWPPCVPVGHRRFSAGPGSAPGQLRGSPIRASSLWRSPGREGPPASLPAQHERFPSQQPLPRAPHLPVEQHRAVAPAGGSPRMLHPAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLLQACTMQQLPVPYQAFPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRADQHPLGGFTYSTSAPGPALSPPVPLHYLPHDPLHQELSFGVPYSHVMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSRQSEQTLCVICFSDFEARQLLRVLPCSHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293850..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301777,6301936..6302042))
location: region:6293850-6302042:-1
so has part: feature:6301936-6302042:-1:exon
so has part: feature:6301558-6301777:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293850-6293912:-1:exon

XP_012636970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6301936-6302042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6301558-6301777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6293850-6293912:-1:exon

RNF44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RNF44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X1
translation: MQPWALAVTRWPPCVPVGHRRFSAGPGSAPGQLRGSPIRASSLWRSPGREGPPASLPAQHERFPSQQPLPRAPHLPVEQHRAVAPAGGSPRMLHPAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLLQACTMQQLPVPYQAFPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRADQHPLGGFTYSTSAPGPALSPPVPLHYLPHDPLHQELSFGVPYSHVMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSRQSEQTLCVICFSDFEARQLLRVLPCSHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293850..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301777,6301936..6302042))
location: region:6293850-6302042:-1
so has part: feature:6301936-6302042:-1:exon
so has part: feature:6301558-6301777:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293850-6293912:-1:exon

XP_012636971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6301936-6302042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6301558-6301777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6293850-6293912:-1:exon

RNF44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RNF44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X3
translation: MLHPAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLLQACTMQQLPVPYQAFPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRADQHPLGGFTYSTSAPGPALSPPVPLHYLPHDPLHQELSFGVPYSHVMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSRQSEQTLCVICFSDFEARQLLRVLPCSHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293850..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301611))
location: region:6293850-6301611:-1
so has part: feature:6301558-6301611:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293850-6293912:-1:exon

XP_012636975.1
type: Protein
SIO_000068: ncbiprotein

position:6301611:-1
position: 6301611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6301558-6301611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6293850-6293912:-1:exon

RNF44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RNF44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 44 isoform X3
translation: MLHPAAQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLLQACTMQQLPVPYQAFPHLISSDHYILHPPPPAPPPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRADQHPLGGFTYSTSAPGPALSPPVPLHYLPHDPLHQELSFGVPYSHVMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSRQSEQTLCVICFSDFEARQLLRVLPCSHEFHAKCVDKWLKANRTCPICRADASEVPREAE
SIO_010081: RNF44
subclass of: SO_0000673
so part of: RNF44
location: complement(join(6293850..6293912,6294109..6294208,6294310..6294431,6294514..6294601,6299948..6300072,6300159..6300320,6300412..6300585,6301019..6301186,6301558..6301611))
location: region:6293850-6301611:-1
so has part: feature:6301558-6301611:-1:exon
so has part: feature:6301019-6301186:-1:exon
so has part: feature:6300412-6300585:-1:exon
so has part: feature:6300159-6300320:-1:exon
so has part: feature:6299948-6300072:-1:exon
so has part: feature:6294514-6294601:-1:exon
so has part: feature:6294310-6294431:-1:exon
so has part: feature:6294109-6294208:-1:exon
so has part: feature:6293850-6293912:-1:exon

XP_012636976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6301558-6301611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6301019-6301186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6300412-6300585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6300159-6300320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6299948-6300072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6294514-6294601:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6294310-6294431:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294109-6294208:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6293850-6293912:-1:exon

CDHR2
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: CDHR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6317309..6378734
location: region:6317309-6378734:1
so has part: feature:6317309-6378734:1:exon
subclass of: SO_0000010

105880453
type: Gene
SIO_000068: ncbigene

position:6317309:1
position: 6317309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6378734:1
position: 6378734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6317309-6378734:1:exon

CDHR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CDHR2
product: cadherin related family member 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_020284220.1
SIO_010081: CDHR2
subclass of: SO_0000673
so part of: CDHR2
location: join(6317309..6317414,6335820..6335886,6336104..6336175,6337998..6338136,6338238..6338280,6339297..6339394,6341028..6341117,6341643..6341768,6342037..6342183,6342261..6342336,6342433..6342548,6342665..6342911,6343074..6343213,6343591..6343752,6343923..6343984,6344244..6344451,6354885..6355042,6357410..6357500,6363980..6364049,6364582..6364844,6371243..6371309,6371580..6371823,6371977..6372085,6372175..6372263,6372656..6372724,6372825..6372902,6372989..6373049,6373132..6373256,6373774..6373887,6373968..6373982,6376118..6376223,6378511..6378734)
location: region:6317309-6378734:1
so has part: feature:6317309-6317414:1:exon
so has part: feature:6335820-6335886:1:exon
so has part: feature:6336104-6336175:1:exon
so has part: feature:6337998-6338136:1:exon
so has part: feature:6338238-6338280:1:exon
so has part: feature:6339297-6339394:1:exon
so has part: feature:6341028-6341117:1:exon
so has part: feature:6341643-6341768:1:exon
so has part: feature:6342037-6342183:1:exon
so has part: feature:6342261-6342336:1:exon
so has part: feature:6342433-6342548:1:exon
so has part: feature:6342665-6342911:1:exon
so has part: feature:6343074-6343213:1:exon
so has part: feature:6343591-6343752:1:exon
so has part: feature:6343923-6343984:1:exon
so has part: feature:6344244-6344451:1:exon
so has part: feature:6354885-6355042:1:exon
so has part: feature:6357410-6357500:1:exon
so has part: feature:6363980-6364049:1:exon
so has part: feature:6364582-6364844:1:exon
so has part: feature:6371243-6371309:1:exon
so has part: feature:6371580-6371823:1:exon
so has part: feature:6371977-6372085:1:exon
so has part: feature:6372175-6372263:1:exon
so has part: feature:6372656-6372724:1:exon
so has part: feature:6372825-6372902:1:exon
so has part: feature:6372989-6373049:1:exon
so has part: feature:6373132-6373256:1:exon
so has part: feature:6373774-6373887:1:exon
so has part: feature:6373968-6373982:1:exon
so has part: feature:6376118-6376223:1:exon
so has part: feature:6378511-6378734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6317309-6317414:1:exon

position:6317414:1
position: 6317414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6335820-6335886:1:exon

position:6335820:1
position: 6335820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6335886:1
position: 6335886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6336104-6336175:1:exon

position:6336104:1
position: 6336104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6336175:1
position: 6336175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6337998-6338136:1:exon

position:6337998:1
position: 6337998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6338136:1
position: 6338136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6338238-6338280:1:exon

position:6338238:1
position: 6338238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6338280:1
position: 6338280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6339297-6339394:1:exon

position:6339297:1
position: 6339297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6339394:1
position: 6339394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6341028-6341117:1:exon

position:6341028:1
position: 6341028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6341117:1
position: 6341117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6341643-6341768:1:exon

position:6341643:1
position: 6341643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6341768:1
position: 6341768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6342037-6342183:1:exon

position:6342037:1
position: 6342037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6342183:1
position: 6342183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6342261-6342336:1:exon

position:6342261:1
position: 6342261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6342336:1
position: 6342336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6342433-6342548:1:exon

position:6342433:1
position: 6342433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6342548:1
position: 6342548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6342665-6342911:1:exon

position:6342665:1
position: 6342665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6342911:1
position: 6342911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6343074-6343213:1:exon

position:6343074:1
position: 6343074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6343213:1
position: 6343213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6343591-6343752:1:exon

position:6343591:1
position: 6343591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6343752:1
position: 6343752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6343923-6343984:1:exon

position:6343923:1
position: 6343923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6343984:1
position: 6343984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6344244-6344451:1:exon

position:6344244:1
position: 6344244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6344451:1
position: 6344451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6354885-6355042:1:exon

position:6354885:1
position: 6354885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6355042:1
position: 6355042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6357410-6357500:1:exon

position:6357410:1
position: 6357410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6357500:1
position: 6357500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6363980-6364049:1:exon

position:6363980:1
position: 6363980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6364049:1
position: 6364049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6364582-6364844:1:exon

position:6364582:1
position: 6364582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6364844:1
position: 6364844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6371243-6371309:1:exon

position:6371243:1
position: 6371243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6371309:1
position: 6371309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6371580-6371823:1:exon

position:6371580:1
position: 6371580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6371823:1
position: 6371823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6371977-6372085:1:exon

position:6371977:1
position: 6371977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6372085:1
position: 6372085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6372175-6372263:1:exon

position:6372175:1
position: 6372175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6372263:1
position: 6372263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6372656-6372724:1:exon

position:6372656:1
position: 6372656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6372724:1
position: 6372724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:6372825-6372902:1:exon

position:6372825:1
position: 6372825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6372902:1
position: 6372902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:6372989-6373049:1:exon

position:6372989:1
position: 6372989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6373049:1
position: 6373049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:6373132-6373256:1:exon

position:6373132:1
position: 6373132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6373256:1
position: 6373256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:6373774-6373887:1:exon

position:6373774:1
position: 6373774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6373887:1
position: 6373887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:6373968-6373982:1:exon

position:6373968:1
position: 6373968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6373982:1
position: 6373982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:6376118-6376223:1:exon

position:6376118:1
position: 6376118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6376223:1
position: 6376223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:6378511-6378734:1:exon

position:6378511:1
position: 6378511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDHR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CDHR2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:6344272..6344274,aa:OTHER)
transl except: (pos:6344284..6344286,aa:OTHER)
product: LOW QUALITY PROTEIN: cadherin-related family member 2
translation: MAQPWLSCLLLPALVVSVAANVAPKFLPNMTVVILPEDLPLDAEAFWLVAEDQDNDPLMYGISGPMPFFNVTANTGQVRLCQPLDFETLKPFSITISVTDGYLQVPRTMNVIVEDRNDNAPVFQNTEFSTSLDETLPVGSVVFSVLAEDKDSGSAGAVVYSIEKVIPDTVDSKHLFRMLANGSIVLNGSLNYNSKSAFYQLQLRACDSGGEYQGSIVTQCSAPVFLSISVVDQPDLDPQFVREFYSATVSEDAAKGTSVLKVEAVDGDKGINDAMTYSITNSTRPGWFSVGADGVIRVEAPLDREQLLAEDEQVQLQVTASEVHLDIHGQEANVSTWVTLTVADVNDHKPEFYNCSLPCAFTAQEACDSFSGYVDEHASPRIPVDGLTMAAYDPDKAGGAADRVSLXXXXXXXXSVSPARAAGSADLQLLVRVSALVDYERQTEMVVQVVATDSVSQNTSIATVTIHLRDVNDHRPTFPQSLYVLTVPEHSAAGFVVTSSIHATDPDTGEWGRITYSLLPGNGPSLLKIVRNXLTNXKXXXXXXXXXDGGNQSASTTLQVHLLDINDNAPVVSGSYNVFVQEEEGNVSVTIQAHDNDEPGTNHSRLLFSLLPGPYSRNFSVDPDTGLLTNLGPLDREAIDPAPGREIRDILLTVLVSDCGVPVLSTEVNVTITVEDINDNLPVFNQSSYLFQVPEQRPGALVGVVAAQDADQTEANNRISFSLAGSGANSFVIRGSVLGAGRAEGRIQLPPDLSLDYETQPSFSLTVSAENPDPQGGEATVEVLVAPWSHGPLGGLVLTLLNTGMRVPASKATLSSDPCWRTGVTGLGWSPDVVRSCSQARDADSGNNGAILFSILQVDFVSKEGTTVPFQGFFRISTSSEGDVFTGNLELVTSLDSTLQGTYQVTVQAQDRPSVGSPQGAKITLNLFTVDQSYRVRLQFSTPREEVGSNTVEIKQALAQATRTTVYVVNIQDISSVARTRAHSYLDAYFVFSNGSALTLNELSVMIRNDQDALTQLLQLGLVVLGSQESQESDLPNVLTSVIIALGVALVLALVIMTVALMCVRKSYHRKLRATKAAKEARKTAAGVVPSGPAIPGTNIYNTERANPMLEDWACQQPELHHLSHSLNSLDDNSVDLDKKHQEMKEEPCDQQGPAPEPLSVILSGRPEGIREQQELSFTNAGLDTTDI
SIO_010081: CDHR2
subclass of: SO_0000673
so part of: CDHR2
location: join(6335835..6335886,6336104..6336175,6337998..6338136,6338238..6338280,6339297..6339394,6341028..6341117,6341643..6341768,6342037..6342183,6342261..6342336,6342433..6342548,6342665..6342911,6343074..6343213,6343591..6343752,6343923..6343984,6344244..6344451,6354885..6355042,6357410..6357500,6363980..6364049,6364582..6364844,6371243..6371309,6371580..6371823,6371977..6372085,6372175..6372263,6372656..6372724,6372825..6372902,6372989..6373049,6373132..6373256,6373774..6373887,6373968..6373982,6376118..6376223,6378511..6378642)
location: region:6335835-6378642:1
so has part: feature:6335835-6335886:1:exon
so has part: feature:6336104-6336175:1:exon
so has part: feature:6337998-6338136:1:exon
so has part: feature:6338238-6338280:1:exon
so has part: feature:6339297-6339394:1:exon
so has part: feature:6341028-6341117:1:exon
so has part: feature:6341643-6341768:1:exon
so has part: feature:6342037-6342183:1:exon
so has part: feature:6342261-6342336:1:exon
so has part: feature:6342433-6342548:1:exon
so has part: feature:6342665-6342911:1:exon
so has part: feature:6343074-6343213:1:exon
so has part: feature:6343591-6343752:1:exon
so has part: feature:6343923-6343984:1:exon
so has part: feature:6344244-6344451:1:exon
so has part: feature:6354885-6355042:1:exon
so has part: feature:6357410-6357500:1:exon
so has part: feature:6363980-6364049:1:exon
so has part: feature:6364582-6364844:1:exon
so has part: feature:6371243-6371309:1:exon
so has part: feature:6371580-6371823:1:exon
so has part: feature:6371977-6372085:1:exon
so has part: feature:6372175-6372263:1:exon
so has part: feature:6372656-6372724:1:exon
so has part: feature:6372825-6372902:1:exon
so has part: feature:6372989-6373049:1:exon
so has part: feature:6373132-6373256:1:exon
so has part: feature:6373774-6373887:1:exon
so has part: feature:6373968-6373982:1:exon
so has part: feature:6376118-6376223:1:exon
so has part: feature:6378511-6378642:1:exon

XP_020139809.1
type: Protein
SIO_000068: ncbiprotein

position:6335835:1
position: 6335835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6378642:1
position: 6378642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6335835-6335886:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6336104-6336175:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6337998-6338136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6338238-6338280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6339297-6339394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6341028-6341117:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6341643-6341768:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6342037-6342183:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6342261-6342336:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6342433-6342548:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6342665-6342911:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6343074-6343213:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6343591-6343752:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6343923-6343984:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6344244-6344451:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6354885-6355042:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6357410-6357500:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6363980-6364049:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6364582-6364844:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6371243-6371309:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6371580-6371823:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6371977-6372085:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6372175-6372263:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6372656-6372724:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6372825-6372902:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6372989-6373049:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6373132-6373256:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6373774-6373887:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6373968-6373982:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6376118-6376223:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6378511-6378642:1:exon

GPRIN1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: GPRIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6378772..6402616)
location: region:6378772-6402616:-1
so has part: feature:6378772-6402616:-1:exon
subclass of: SO_0000010

105880460
type: Gene
SIO_000068: ncbigene

position:6378772:-1
position: 6378772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6402616:-1
position: 6402616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6378772-6402616:-1:exon

GPRIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GPRIN1
product: G protein regulated inducer of neurite outgrowth 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012781511.2
SIO_010081: GPRIN1
subclass of: SO_0000673
so part of: GPRIN1
location: complement(join(6378772..6382809,6402558..6402616))
location: region:6378772-6402616:-1
so has part: feature:6402558-6402616:-1:exon
so has part: feature:6378772-6382809:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6402558-6402616:-1:exon

position:6402558:-1
position: 6402558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6378772-6382809:-1:exon

position:6382809:-1
position: 6382809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPRIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GPRIN1
product: G protein regulated inducer of neurite outgrowth 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012781510.2
SIO_010081: GPRIN1
subclass of: SO_0000673
so part of: GPRIN1
location: complement(join(6378772..6382809,6390285..6390369))
location: region:6378772-6390369:-1
so has part: feature:6390285-6390369:-1:exon
so has part: feature:6378772-6382809:-1:exon

position:6390369:-1
position: 6390369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6390285-6390369:-1:exon

position:6390285:-1
position: 6390285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6378772-6382809:-1:exon

GPRIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GPRIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-regulated inducer of neurite outgrowth 1
translation: MGSAEDPAWLQLLRKDSSAPGPWPTALCCPQDGSLGDGGPAMKDCCPSPQKASPAPPRHTPDQSPGMDSRHRSPGGAGEGASYPEGPGGSLACPSPTCISPQGAASKETLGAHGAPVTGTLETTLSGKPEPVSSVKTHPTSSEDRNPVFLEKTDSKSSEQAASTSVGKADTGSSGKAESAVWGKGGPGAPGKPDPVTPGKEDLGSLGTTDPVCKVDTMSPRKEDPVSSGKAASEFPRKEEPRYSRKEPPVSAEKPGPASVGKPDLLSLGKREPEPSGQWDPTSLGDTDSAGTVEAGPGRPGLLARGPPGNAEPERPGAAAPGASGREVPAGLGTAGPASVGDVETAASSTKEDAGFLGTPEPDCSAERGPVSTGTTKPGSAGHADATSRKTHPAPSKNVDRLSSDEVGPACLGKPDPRSPGKPEPSPPGQAECVSVRKTEMSVSSGKEDLVSSRREDPTSVGNVKAFPSEKENPGSSGKTEPVPAAPGSPKSLGAAAPPLAVPAAAGTGGKGDPLWGKAGPVASRKVGPTASGKAGGLASAGKPDPVGRGKADAVPSGDLDSSMSAGTVVSAAPGKAALVSSGKADPVSSGTAGASPGGKGAALPLEEENPASPTGDPRASGAAEPRSGAAAERKLPAQEAAASRGAEAVSLQKELPQAAEKVDPGSSSRADTGAPGKGEPGSPGQADSASPRKTEPQSLGRVAPLSLARSIPSSRQSDGKPCGSALSPQGAGSSKDHVEPEPEPAPSAAAKASTLGQKDLAVAGAEQTPRPEAAPGQRTRDNFTKAPSWEASAPPPPREDAGTQAGAQPCVSVAVSPMSPQDDAGAPAFSFQAAPRAPSPAPGPPSRRDAGLQVSLGAAETRSVATGPMTPQAAAPPAFPEVRVRPGSALAAAVAPPEAAEPVRDVSWDEKGMTWEVYGASMEVEVLGMAIQKHLERQIEEHGRQGAPAPPPAARAGPGRVGSVRAAPPDGANKRPPGLFRALLQSVRRPRCCSRAGPTAE
SIO_010081: GPRIN1
subclass of: SO_0000673
so part of: GPRIN1
location: complement(6379758..6382766)
location: region:6379758-6382766:-1
so has part: feature:6379758-6382766:-1:exon

XP_012636964.1
type: Protein
SIO_000068: ncbiprotein

position:6379758:-1
position: 6379758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6382766:-1
position: 6382766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6379758-6382766:-1:exon

GPRIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GPRIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-regulated inducer of neurite outgrowth 1
translation: MGSAEDPAWLQLLRKDSSAPGPWPTALCCPQDGSLGDGGPAMKDCCPSPQKASPAPPRHTPDQSPGMDSRHRSPGGAGEGASYPEGPGGSLACPSPTCISPQGAASKETLGAHGAPVTGTLETTLSGKPEPVSSVKTHPTSSEDRNPVFLEKTDSKSSEQAASTSVGKADTGSSGKAESAVWGKGGPGAPGKPDPVTPGKEDLGSLGTTDPVCKVDTMSPRKEDPVSSGKAASEFPRKEEPRYSRKEPPVSAEKPGPASVGKPDLLSLGKREPEPSGQWDPTSLGDTDSAGTVEAGPGRPGLLARGPPGNAEPERPGAAAPGASGREVPAGLGTAGPASVGDVETAASSTKEDAGFLGTPEPDCSAERGPVSTGTTKPGSAGHADATSRKTHPAPSKNVDRLSSDEVGPACLGKPDPRSPGKPEPSPPGQAECVSVRKTEMSVSSGKEDLVSSRREDPTSVGNVKAFPSEKENPGSSGKTEPVPAAPGSPKSLGAAAPPLAVPAAAGTGGKGDPLWGKAGPVASRKVGPTASGKAGGLASAGKPDPVGRGKADAVPSGDLDSSMSAGTVVSAAPGKAALVSSGKADPVSSGTAGASPGGKGAALPLEEENPASPTGDPRASGAAEPRSGAAAERKLPAQEAAASRGAEAVSLQKELPQAAEKVDPGSSSRADTGAPGKGEPGSPGQADSASPRKTEPQSLGRVAPLSLARSIPSSRQSDGKPCGSALSPQGAGSSKDHVEPEPEPAPSAAAKASTLGQKDLAVAGAEQTPRPEAAPGQRTRDNFTKAPSWEASAPPPPREDAGTQAGAQPCVSVAVSPMSPQDDAGAPAFSFQAAPRAPSPAPGPPSRRDAGLQVSLGAAETRSVATGPMTPQAAAPPAFPEVRVRPGSALAAAVAPPEAAEPVRDVSWDEKGMTWEVYGASMEVEVLGMAIQKHLERQIEEHGRQGAPAPPPAARAGPGRVGSVRAAPPDGANKRPPGLFRALLQSVRRPRCCSRAGPTAE
SIO_010081: GPRIN1
subclass of: SO_0000673
so part of: GPRIN1
location: complement(6379758..6382766)
location: region:6379758-6382766:-1
so has part: feature:6379758-6382766:-1:exon

XP_012636965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6379758-6382766:-1:exon

SNCB
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: SNCB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6403902..6413075)
location: region:6403902-6413075:-1
so has part: feature:6403902-6413075:-1:exon
subclass of: SO_0000010

105880459
type: Gene
SIO_000068: ncbigene

position:6403902:-1
position: 6403902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6413075:-1
position: 6413075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6403902-6413075:-1:exon

SNCB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SNCB
product: synuclein beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 11 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020284273.1
SIO_010081: SNCB
subclass of: SO_0000673
so part of: SNCB
location: complement(join(6403902..6404467,6404833..6404922,6408807..6408925,6409108..6409149,6412105..6412234,6412808..6413075))
location: region:6403902-6413075:-1
so has part: feature:6412808-6413075:-1:exon
so has part: feature:6412105-6412234:-1:exon
so has part: feature:6409108-6409149:-1:exon
so has part: feature:6408807-6408925:-1:exon
so has part: feature:6404833-6404922:-1:exon
so has part: feature:6403902-6404467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6412808-6413075:-1:exon

position:6412808:-1
position: 6412808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6412105-6412234:-1:exon

position:6412105:-1
position: 6412105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6412234:-1
position: 6412234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6409108-6409149:-1:exon

position:6409108:-1
position: 6409108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6409149:-1
position: 6409149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6408807-6408925:-1:exon

position:6408807:-1
position: 6408807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6408925:-1
position: 6408925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6404833-6404922:-1:exon

position:6404833:-1
position: 6404833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6404922:-1
position: 6404922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6403902-6404467:-1:exon

position:6404467:-1
position: 6404467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNCB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SNCB
product: synuclein beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_020284275.1
SIO_010081: SNCB
subclass of: SO_0000673
so part of: SNCB
location: complement(join(6403902..6404467,6404833..6404922,6408807..6408925,6409120..6409149,6412105..6412234,6412808..6412904))
location: region:6403902-6412904:-1
so has part: feature:6412808-6412904:-1:exon
so has part: feature:6412105-6412234:-1:exon
so has part: feature:6409120-6409149:-1:exon
so has part: feature:6408807-6408925:-1:exon
so has part: feature:6404833-6404922:-1:exon
so has part: feature:6403902-6404467:-1:exon

position:6412904:-1
position: 6412904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6412808-6412904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6412105-6412234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6409120-6409149:-1:exon

position:6409120:-1
position: 6409120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6408807-6408925:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6404833-6404922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6403902-6404467:-1:exon

SNCB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SNCB
product: synuclein beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_020284274.1
SIO_010081: SNCB
subclass of: SO_0000673
so part of: SNCB
location: complement(join(6403902..6404467,6404833..6404922,6408807..6408925,6409108..6409149,6412105..6412234,6412466..6412490))
location: region:6403902-6412490:-1
so has part: feature:6412466-6412490:-1:exon
so has part: feature:6412105-6412234:-1:exon
so has part: feature:6409108-6409149:-1:exon
so has part: feature:6408807-6408925:-1:exon
so has part: feature:6404833-6404922:-1:exon
so has part: feature:6403902-6404467:-1:exon

position:6412490:-1
position: 6412490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6412466-6412490:-1:exon

position:6412466:-1
position: 6412466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6412105-6412234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6409108-6409149:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6408807-6408925:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6404833-6404922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6403902-6404467:-1:exon

SNCB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SNCB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-synuclein isoform X2
translation: MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKTREGVVQVAEKTKEQASHLGGAVFSGAGNIAAATGLVKKEEFPSDLKPEEVAQEAAEEPLIEPLMEPEGESYEEPPQEEYQEYEPEA
SIO_010081: SNCB
subclass of: SO_0000673
so part of: SNCB
location: complement(join(6404435..6404467,6404833..6404922,6408807..6408925,6409120..6409149,6412105..6412225))
location: region:6404435-6412225:-1
so has part: feature:6412105-6412225:-1:exon
so has part: feature:6409120-6409149:-1:exon
so has part: feature:6408807-6408925:-1:exon
so has part: feature:6404833-6404922:-1:exon
so has part: feature:6404435-6404467:-1:exon

XP_020139864.1
type: Protein
SIO_000068: ncbiprotein

position:6404435:-1
position: 6404435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6412225:-1
position: 6412225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6412105-6412225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6409120-6409149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6408807-6408925:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6404833-6404922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6404435-6404467:-1:exon

SNCB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SNCB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-synuclein isoform X1
translation: MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKTREGVVQGVASVAEKTKEQASHLGGAVFSGAGNIAAATGLVKKEEFPSDLKPEEVAQEAAEEPLIEPLMEPEGESYEEPPQEEYQEYEPEA
SIO_010081: SNCB
subclass of: SO_0000673
so part of: SNCB
location: complement(join(6404435..6404467,6404833..6404922,6408807..6408925,6409108..6409149,6412105..6412225))
location: region:6404435-6412225:-1
so has part: feature:6412105-6412225:-1:exon
so has part: feature:6409108-6409149:-1:exon
so has part: feature:6408807-6408925:-1:exon
so has part: feature:6404833-6404922:-1:exon
so has part: feature:6404435-6404467:-1:exon

XP_020139862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6412105-6412225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6409108-6409149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6408807-6408925:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6404833-6404922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6404435-6404467:-1:exon

SNCB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SNCB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-synuclein isoform X1
translation: MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKTREGVVQGVASVAEKTKEQASHLGGAVFSGAGNIAAATGLVKKEEFPSDLKPEEVAQEAAEEPLIEPLMEPEGESYEEPPQEEYQEYEPEA
SIO_010081: SNCB
subclass of: SO_0000673
so part of: SNCB
location: complement(join(6404435..6404467,6404833..6404922,6408807..6408925,6409108..6409149,6412105..6412225))
location: region:6404435-6412225:-1
so has part: feature:6412105-6412225:-1:exon
so has part: feature:6409108-6409149:-1:exon
so has part: feature:6408807-6408925:-1:exon
so has part: feature:6404833-6404922:-1:exon
so has part: feature:6404435-6404467:-1:exon

XP_020139863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6412105-6412225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6409108-6409149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6408807-6408925:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6404833-6404922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6404435-6404467:-1:exon

EIF4E1B
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: EIF4E1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6420001..6427441
location: region:6420001-6427441:1
so has part: feature:6420001-6427441:1:exon
subclass of: SO_0000010

105880452
type: Gene
SIO_000068: ncbigene

position:6420001:1
position: 6420001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6427441:1
position: 6427441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6420001-6427441:1:exon

EIF4E1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: EIF4E1B
product: eukaryotic translation initiation factor 4E family member 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012781502.1
SIO_010081: EIF4E1B
subclass of: SO_0000673
so part of: EIF4E1B
location: join(6420001..6420013,6422551..6422570,6423848..6424047,6424351..6424446,6424980..6425043,6425746..6425859,6425973..6426112,6426416..6427441)
location: region:6420001-6427441:1
so has part: feature:6420001-6420013:1:exon
so has part: feature:6422551-6422570:1:exon
so has part: feature:6423848-6424047:1:exon
so has part: feature:6424351-6424446:1:exon
so has part: feature:6424980-6425043:1:exon
so has part: feature:6425746-6425859:1:exon
so has part: feature:6425973-6426112:1:exon
so has part: feature:6426416-6427441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6420001-6420013:1:exon

position:6420013:1
position: 6420013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6422551-6422570:1:exon

position:6422551:1
position: 6422551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6422570:1
position: 6422570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6423848-6424047:1:exon

position:6423848:1
position: 6423848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6424047:1
position: 6424047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6424351-6424446:1:exon

position:6424351:1
position: 6424351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6424446:1
position: 6424446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6424980-6425043:1:exon

position:6424980:1
position: 6424980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6425043:1
position: 6425043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6425746-6425859:1:exon

position:6425746:1
position: 6425746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6425859:1
position: 6425859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6425973-6426112:1:exon

position:6425973:1
position: 6425973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6426112:1
position: 6426112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6426416-6427441:1:exon

position:6426416:1
position: 6426416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EIF4E1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: EIF4E1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4E type 1B
translation: MPRTGGCSEAQVSETEGGIQKWGEEKEEKEEEEEEEEETAVGAAGGEALSSPRTPLAGEPGTDGCAGATPELHLLQNRWVLWFLKNSRSRAWRDNLQLVTKVHTVEDFWALYSHSKLASKLSPGCDYALFKDGIEPTWEDGRNRQGGRWLVSLAKKQRHSKLDQLWRDTLLCLIGESFEEHGGEVCGAVVSIRTNGDKIAVWTGEAENQEAVLHIGRVYKEYLGLSAKTVIGYQAHADTAAKSNSLARNKLVV
SIO_010081: EIF4E1B
subclass of: SO_0000673
so part of: EIF4E1B
location: join(6420001..6420013,6422551..6422570,6423848..6424047,6424351..6424446,6424980..6425043,6425746..6425859,6425973..6426112,6426416..6426530)
location: region:6420001-6426530:1
so has part: feature:6420001-6420013:1:exon
so has part: feature:6422551-6422570:1:exon
so has part: feature:6423848-6424047:1:exon
so has part: feature:6424351-6424446:1:exon
so has part: feature:6424980-6425043:1:exon
so has part: feature:6425746-6425859:1:exon
so has part: feature:6425973-6426112:1:exon
so has part: feature:6426416-6426530:1:exon

XP_012636956.1
type: Protein
SIO_000068: ncbiprotein

position:6426530:1
position: 6426530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6420001-6420013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6422551-6422570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6423848-6424047:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6424351-6424446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6424980-6425043:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6425746-6425859:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6425973-6426112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6426416-6426530:1:exon

TSPAN17
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: TSPAN17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6429409..6442308
location: region:6429409-6442308:1
so has part: feature:6429409-6442308:1:exon
subclass of: SO_0000010

105880458
type: Gene
SIO_000068: ncbigene

position:6429409:1
position: 6429409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6442308:1
position: 6442308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6429409-6442308:1:exon

TSPAN17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TSPAN17
product: tetraspanin 17, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_012781507.2
SIO_010081: TSPAN17
subclass of: SO_0000673
so part of: TSPAN17
location: join(6429409..6429706,6433428..6433478,6433569..6433715,6434578..6434748,6438292..6438417,6439503..6439550,6440062..6440178,6440253..6440314,6441092..6442308)
location: region:6429409-6442308:1
so has part: feature:6429409-6429706:1:exon
so has part: feature:6433428-6433478:1:exon
so has part: feature:6433569-6433715:1:exon
so has part: feature:6434578-6434748:1:exon
so has part: feature:6438292-6438417:1:exon
so has part: feature:6439503-6439550:1:exon
so has part: feature:6440062-6440178:1:exon
so has part: feature:6440253-6440314:1:exon
so has part: feature:6441092-6442308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6429409-6429706:1:exon

position:6429706:1
position: 6429706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6433428-6433478:1:exon

position:6433428:1
position: 6433428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6433478:1
position: 6433478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6433569-6433715:1:exon

position:6433569:1
position: 6433569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6433715:1
position: 6433715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6434578-6434748:1:exon

position:6434578:1
position: 6434578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6434748:1
position: 6434748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6438292-6438417:1:exon

position:6438292:1
position: 6438292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6438417:1
position: 6438417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6439503-6439550:1:exon

position:6439503:1
position: 6439503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6439550:1
position: 6439550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6440062-6440178:1:exon

position:6440062:1
position: 6440062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6440178:1
position: 6440178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6440253-6440314:1:exon

position:6440253:1
position: 6440253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6440314:1
position: 6440314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6441092-6442308:1:exon

position:6441092:1
position: 6441092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: TSPAN17
product: tetraspanin 17, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012781508.2
SIO_010081: TSPAN17
subclass of: SO_0000673
so part of: TSPAN17
location: join(6429409..6429706,6433428..6433478,6433569..6433715,6434578..6434748,6438292..6438417,6439503..6439550,6440062..6440178,6440277..6440314,6441092..6442308)
location: region:6429409-6442308:1
so has part: feature:6429409-6429706:1:exon
so has part: feature:6433428-6433478:1:exon
so has part: feature:6433569-6433715:1:exon
so has part: feature:6434578-6434748:1:exon
so has part: feature:6438292-6438417:1:exon
so has part: feature:6439503-6439550:1:exon
so has part: feature:6440062-6440178:1:exon
so has part: feature:6440277-6440314:1:exon
so has part: feature:6441092-6442308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6429409-6429706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6433428-6433478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6433569-6433715:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6434578-6434748:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6438292-6438417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6439503-6439550:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6440062-6440178:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6440277-6440314:1:exon

position:6440277:1
position: 6440277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6441092-6442308:1:exon

TSPAN17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TSPAN17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-17 isoform X1
translation: MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKDWIRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVVNTQCGYDVRLKLELEQQGFIHTKGCVGQFEKWLQDNLIVVAGVFVGIALLQIFGICLAQNLVSDIKAVKANCLGRLHIGANL
SIO_010081: TSPAN17
subclass of: SO_0000673
so part of: TSPAN17
location: join(6429620..6429706,6433428..6433478,6433569..6433715,6434578..6434748,6438292..6438417,6439503..6439550,6440062..6440178,6440253..6440314,6441092..6441125)
location: region:6429620-6441125:1
so has part: feature:6429620-6429706:1:exon
so has part: feature:6433428-6433478:1:exon
so has part: feature:6433569-6433715:1:exon
so has part: feature:6434578-6434748:1:exon
so has part: feature:6438292-6438417:1:exon
so has part: feature:6439503-6439550:1:exon
so has part: feature:6440062-6440178:1:exon
so has part: feature:6440253-6440314:1:exon
so has part: feature:6441092-6441125:1:exon

XP_012636961.1
type: Protein
SIO_000068: ncbiprotein

position:6429620:1
position: 6429620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6441125:1
position: 6441125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6429620-6429706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6433428-6433478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6433569-6433715:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6434578-6434748:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6438292-6438417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6439503-6439550:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6440062-6440178:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6440253-6440314:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6441092-6441125:1:exon

TSPAN17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: TSPAN17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-17 isoform X2
translation: MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKDWIRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVVNTQCGYDVRLKLELEQQGFIHTKGCVGQFEKWLQDNLIVVAGVFVGIALLQNLVSDIKAVKANCLGRLHIGANL
SIO_010081: TSPAN17
subclass of: SO_0000673
so part of: TSPAN17
location: join(6429620..6429706,6433428..6433478,6433569..6433715,6434578..6434748,6438292..6438417,6439503..6439550,6440062..6440178,6440277..6440314,6441092..6441125)
location: region:6429620-6441125:1
so has part: feature:6429620-6429706:1:exon
so has part: feature:6433428-6433478:1:exon
so has part: feature:6433569-6433715:1:exon
so has part: feature:6434578-6434748:1:exon
so has part: feature:6438292-6438417:1:exon
so has part: feature:6439503-6439550:1:exon
so has part: feature:6440062-6440178:1:exon
so has part: feature:6440277-6440314:1:exon
so has part: feature:6441092-6441125:1:exon

XP_012636962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6429620-6429706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6433428-6433478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6433569-6433715:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6434578-6434748:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6438292-6438417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6439503-6439550:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6440062-6440178:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6440277-6440314:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6441092-6441125:1:exon

LOC105870029
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105870029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6514211..6518432)
location: region:6514211-6518432:-1
so has part: feature:6514211-6518432:-1:exon
subclass of: SO_0000010

105870029
type: Gene
SIO_000068: ncbigene

position:6514211:-1
position: 6514211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6518432:-1
position: 6518432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6514211-6518432:-1:exon

LOC105870029
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105870029
product: cadherin-related family member 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012762285.2
SIO_010081: LOC105870029
subclass of: SO_0000673
so part of: LOC105870029
location: complement(join(6514211..6514585,6517953..6518024,6518267..6518432))
location: region:6514211-6518432:-1
so has part: feature:6518267-6518432:-1:exon
so has part: feature:6517953-6518024:-1:exon
so has part: feature:6514211-6514585:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6518267-6518432:-1:exon

position:6518267:-1
position: 6518267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6517953-6518024:-1:exon

position:6517953:-1
position: 6517953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6518024:-1
position: 6518024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6514211-6514585:-1:exon

position:6514585:-1
position: 6514585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105870029
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105870029
product: cadherin-related family member 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_020284276.1
SIO_010081: LOC105870029
subclass of: SO_0000673
so part of: LOC105870029
location: complement(join(6514211..6514338,6514446..6514585,6517953..6518024,6518267..6518426))
location: region:6514211-6518426:-1
so has part: feature:6518267-6518426:-1:exon
so has part: feature:6517953-6518024:-1:exon
so has part: feature:6514446-6514585:-1:exon
so has part: feature:6514211-6514338:-1:exon

position:6518426:-1
position: 6518426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6518267-6518426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6517953-6518024:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6514446-6514585:-1:exon

position:6514446:-1
position: 6514446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6514211-6514338:-1:exon

position:6514338:-1
position: 6514338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105870029
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105870029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-related family member 2-like isoform X2
translation: MAQPWLSCLLLPALVVSVAANVAPKFLPNMTVVILPEDLPLDAEAFWLVAEDQDNDPLTYGISGSNAHFFNVTANTGQVRLASPLDFETLNTFSITISVTDDYYLVSPNVGGGGWPPPRASREHPS
SIO_010081: LOC105870029
subclass of: SO_0000673
so part of: LOC105870029
location: complement(join(6514222..6514338,6514446..6514585,6517953..6518024,6518267..6518318))
location: region:6514222-6518318:-1
so has part: feature:6518267-6518318:-1:exon
so has part: feature:6517953-6518024:-1:exon
so has part: feature:6514446-6514585:-1:exon
so has part: feature:6514222-6514338:-1:exon

XP_020139865.1
type: Protein
SIO_000068: ncbiprotein

position:6514222:-1
position: 6514222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6518318:-1
position: 6518318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6518267-6518318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6517953-6518024:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6514446-6514585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6514222-6514338:-1:exon

LOC105870029
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105870029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-related family member 2-like isoform X1
translation: MAQPWLSCLLLPALVVSVAANVAPKFLPNMTVVILPEDLPLDAEAFWLVAEDQDNDPLTYGISGSNAHFFNVTANTGQVRLASPLDFEVKGRDGEPAWEWGRGPWPVLPPAGCHLGPLLSARCRHSTHSASPSP
SIO_010081: LOC105870029
subclass of: SO_0000673
so part of: LOC105870029
location: complement(join(6514305..6514585,6517953..6518024,6518267..6518318))
location: region:6514305-6518318:-1
so has part: feature:6518267-6518318:-1:exon
so has part: feature:6517953-6518024:-1:exon
so has part: feature:6514305-6514585:-1:exon

XP_012617739.2
type: Protein
SIO_000068: ncbiprotein

position:6514305:-1
position: 6514305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6518267-6518318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6517953-6518024:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6514305-6514585:-1:exon

GC
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: GC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6717031..6768711
location: region:6717031-6768711:1
so has part: feature:6717031-6768711:1:exon
subclass of: SO_0000010

105869725
type: Gene
SIO_000068: ncbigene

position:6717031:1
position: 6717031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6768711:1
position: 6768711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6717031-6768711:1:exon

GC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: GC
product: GC, vitamin D binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 215 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012761762.2
SIO_010081: GC
subclass of: SO_0000673
so part of: GC
location: join(6717031..6717188,6731477..6731546,6732138..6732270,6748336..6748547,6749747..6749879,6750186..6750280,6752315..6752444,6753803..6754005,6755333..6755462,6755934..6756031,6757993..6758125,6764581..6764635,6768537..6768711)
location: region:6717031-6768711:1
so has part: feature:6717031-6717188:1:exon
so has part: feature:6731477-6731546:1:exon
so has part: feature:6732138-6732270:1:exon
so has part: feature:6748336-6748547:1:exon
so has part: feature:6749747-6749879:1:exon
so has part: feature:6750186-6750280:1:exon
so has part: feature:6752315-6752444:1:exon
so has part: feature:6753803-6754005:1:exon
so has part: feature:6755333-6755462:1:exon
so has part: feature:6755934-6756031:1:exon
so has part: feature:6757993-6758125:1:exon
so has part: feature:6764581-6764635:1:exon
so has part: feature:6768537-6768711:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6717031-6717188:1:exon

position:6717188:1
position: 6717188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6731477-6731546:1:exon

position:6731477:1
position: 6731477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6731546:1
position: 6731546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6732138-6732270:1:exon

position:6732138:1
position: 6732138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6732270:1
position: 6732270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6748336-6748547:1:exon

position:6748336:1
position: 6748336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6748547:1
position: 6748547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6749747-6749879:1:exon

position:6749747:1
position: 6749747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6749879:1
position: 6749879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6750186-6750280:1:exon

position:6750186:1
position: 6750186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6750280:1
position: 6750280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6752315-6752444:1:exon

position:6752315:1
position: 6752315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6752444:1
position: 6752444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6753803-6754005:1:exon

position:6753803:1
position: 6753803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6754005:1
position: 6754005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6755333-6755462:1:exon

position:6755333:1
position: 6755333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6755462:1
position: 6755462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6755934-6756031:1:exon

position:6755934:1
position: 6755934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6756031:1
position: 6756031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6757993-6758125:1:exon

position:6757993:1
position: 6757993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6758125:1
position: 6758125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6764581-6764635:1:exon

position:6764581:1
position: 6764581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6764635:1
position: 6764635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6768537-6768711:1:exon

position:6768537:1
position: 6768537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: GC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D-binding protein
translation: MKRFLAFLLAVALGHALERGRDYEKDKVCKEFANLGKDDFTSLSLVLYSRKFPSGTFEQVSQLVEEVVSLTEACCAEGADPDCYDSRTSALSVKSCESDSPFPAHPGTAECCTKEGLERKLCMAALKHPPQEFPTYVEPTNEEICEAFRKDPKGFAAQFLYEYSSNYGQAPLPLLVSYTKSYLSMVGSCCTSASPTVCFLKERLQSKHLSLLTTLSNRVCSQYAAYGKEKSRLSHLIKLAQKVPAVDLEDILPLAEDVTNILSKCCQSTSEDCMAKELPEYTIKICDNLSTKNSKFGDCCQEKTPMDIFMCTYFMPAAQPPELPDVKLPTSKDVCNPGSTKAMDQYTFELSRRTQVPEVFLSKILEPTLKSLGECCDLKDPTACLKAKSPLLTKELSSFIGKGQELCADYSENTFTEYKKKLAERLRAKLPDATPAELDDLVERRSDFASKCCSINSPPLYCDSQIDAEMTDVLQS
SIO_010081: GC
subclass of: SO_0000673
so part of: GC
location: join(6717131..6717188,6731477..6731546,6732138..6732270,6748336..6748547,6749747..6749879,6750186..6750280,6752315..6752444,6753803..6754005,6755333..6755462,6755934..6756031,6757993..6758125,6764581..6764616)
location: region:6717131-6764616:1
so has part: feature:6717131-6717188:1:exon
so has part: feature:6731477-6731546:1:exon
so has part: feature:6732138-6732270:1:exon
so has part: feature:6748336-6748547:1:exon
so has part: feature:6749747-6749879:1:exon
so has part: feature:6750186-6750280:1:exon
so has part: feature:6752315-6752444:1:exon
so has part: feature:6753803-6754005:1:exon
so has part: feature:6755333-6755462:1:exon
so has part: feature:6755934-6756031:1:exon
so has part: feature:6757993-6758125:1:exon
so has part: feature:6764581-6764616:1:exon

XP_012617216.2
type: Protein
SIO_000068: ncbiprotein

position:6717131:1
position: 6717131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6764616:1
position: 6764616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6717131-6717188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6731477-6731546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6732138-6732270:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6748336-6748547:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6749747-6749879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6750186-6750280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6752315-6752444:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6753803-6754005:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6755333-6755462:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6755934-6756031:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6757993-6758125:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6764581-6764616:1:exon

LOC105868973
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105868973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6994961..6996508
location: region:6994961-6996508:1
so has part: feature:6994961-6996508:1:exon

105868973
type: Gene
SIO_000068: ncbigene

position:6994961:1
position: 6994961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6996508:1
position: 6996508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6994961-6996508:1:exon

LOC105868973
type: Exon
subclass of: SO_0000147
RO_0002162: 30608
gene: LOC105868973
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 17 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105868973
subclass of: SO_0000673
so part of: LOC105868973
location: 6994961..6996508
location: region:6994961-6996508:1
so has part: feature:6994961-6996508:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6994961-6996508:1:exon

LOC105868974
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LOC105868974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7003986..7021910
location: region:7003986-7021910:1
so has part: feature:7003986-7021910:1:exon
subclass of: SO_0000010

105868974
type: Gene
SIO_000068: ncbigene

position:7003986:1
position: 7003986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7021910:1
position: 7021910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7003986-7021910:1:exon

LOC105868974
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LOC105868974
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012760398.2
SIO_010081: LOC105868974
subclass of: SO_0000673
so part of: LOC105868974
location: join(7003986..7004012,7015056..7015182,7017154..7017286,7017412..7018174,7018489..7019247,7021123..7021910)
location: region:7003986-7021910:1
so has part: feature:7003986-7004012:1:exon
so has part: feature:7015056-7015182:1:exon
so has part: feature:7017154-7017286:1:exon
so has part: feature:7017412-7018174:1:exon
so has part: feature:7018489-7019247:1:exon
so has part: feature:7021123-7021910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7003986-7004012:1:exon

position:7004012:1
position: 7004012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7015056-7015182:1:exon

position:7015056:1
position: 7015056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7015182:1
position: 7015182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7017154-7017286:1:exon

position:7017154:1
position: 7017154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7017286:1
position: 7017286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7017412-7018174:1:exon

position:7017412:1
position: 7017412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7018174:1
position: 7018174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7018489-7019247:1:exon

position:7018489:1
position: 7018489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7019247:1
position: 7019247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7021123-7021910:1:exon

position:7021123:1
position: 7021123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105868974
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LOC105868974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105868974
translation: MQEGPSLSEREVIKTLRPESLLSCQRQFQQAVSDFPARDVLTVEPGFDAALGGHQSGVQEVPPRPESLHREAEATRALQHPHTLKLLGVIEDERPEPPACSWTGTGCEAGGGEAHLHALCGLPCPPPRLSGEGCAGPSGRVEPSRPLLHGGGVFPPAAPGGAENEHRRGLKTPAFFSRELTALLGRRSPWARAEAALSGLLEDAASRAGAPRPRRPRVPCEAAQQWRCARPVPVPPGQPWQESSRPCPRWRPRRRPRPLSGEEAGQGRKGLAGRLGEVLKSPLRPAALEIRCGRRRRTPGAGDSAAGAARAGVRAGPAMLPAPCAVCRGLADAVCHRQVTDGRMSAVQCENGDQEAPELPGS
SIO_010081: LOC105868974
subclass of: SO_0000673
so part of: LOC105868974
location: join(7003986..7004012,7015056..7015182,7017154..7017286,7017412..7018174,7018489..7018527)
location: region:7003986-7018527:1
so has part: feature:7003986-7004012:1:exon
so has part: feature:7015056-7015182:1:exon
so has part: feature:7017154-7017286:1:exon
so has part: feature:7017412-7018174:1:exon
so has part: feature:7018489-7018527:1:exon

XP_012615852.1
type: Protein
SIO_000068: ncbiprotein

position:7018527:1
position: 7018527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7003986-7004012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7015056-7015182:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7017154-7017286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7017412-7018174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7018489-7018527:1:exon

LMCD1
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: LMCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7055945..7118591
location: region:7055945-7118591:1
so has part: feature:7055945-7118591:1:exon
subclass of: SO_0000010

105868975
type: Gene
SIO_000068: ncbigene

position:7055945:1
position: 7055945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7118591:1
position: 7118591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7055945-7118591:1:exon

LMCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: LMCD1
product: LIM and cysteine rich domains 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012760399.2
SIO_010081: LMCD1
subclass of: SO_0000673
so part of: LMCD1
location: join(7055945..7056046,7100865..7100953,7105763..7106018,7107531..7107866,7115151..7115354,7117675..7118099,7118206..7118591)
location: region:7055945-7118591:1
so has part: feature:7055945-7056046:1:exon
so has part: feature:7100865-7100953:1:exon
so has part: feature:7105763-7106018:1:exon
so has part: feature:7107531-7107866:1:exon
so has part: feature:7115151-7115354:1:exon
so has part: feature:7117675-7118099:1:exon
so has part: feature:7118206-7118591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7055945-7056046:1:exon

position:7056046:1
position: 7056046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7100865-7100953:1:exon

position:7100865:1
position: 7100865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7100953:1
position: 7100953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7105763-7106018:1:exon

position:7105763:1
position: 7105763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7106018:1
position: 7106018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7107531-7107866:1:exon

position:7107531:1
position: 7107531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7107866:1
position: 7107866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7115151-7115354:1:exon

position:7115151:1
position: 7115151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7115354:1
position: 7115354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7117675-7118099:1:exon

position:7117675:1
position: 7117675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7118099:1
position: 7118099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7118206-7118591:1:exon

position:7118206:1
position: 7118206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LMCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: LMCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM and cysteine-rich domains protein 1
translation: MAQVAKDLNPGVKKMSLGQLPPARGVACLGCQGSCPGFEPHSWRKICRSCRCGQEEHCLSSDLEDDRKIGRLLTGSTHASLTARVRGGGGVRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVTQKLGLQYMELVPKEKQPVTGTEGALYRRRQLMRQLPVYDQDPACCRGLAEDELPAMEAFVKQYKSEALGVGEVALPGQGGLPREDGKPQQKPEAAEPAAPATNGSLGDPSKEAEYVCELCKAAAPADSPVVYAGRAGYAKQWHPACFLCARCREPLVDLIYFWKDGAPWCGRHYCESLRPRCSSCHGAEEKGCSCSFPLRDDTHGLCRRCAATPGTRADFRVGLLWRTCSDILWGLFHGEGLYSGKHGRDRTRASRCLCRPPQLIFAEDYQRVEGLAWHRKHFACEGCEQLLSGRAYIVTKGQLLCPTCSKSKRA
SIO_010081: LMCD1
subclass of: SO_0000673
so part of: LMCD1
location: join(7056005..7056046,7100865..7100953,7105763..7106018,7107531..7107866,7115151..7115354,7117675..7118073)
location: region:7056005-7118073:1
so has part: feature:7056005-7056046:1:exon
so has part: feature:7100865-7100953:1:exon
so has part: feature:7105763-7106018:1:exon
so has part: feature:7107531-7107866:1:exon
so has part: feature:7115151-7115354:1:exon
so has part: feature:7117675-7118073:1:exon

XP_012615853.2
type: Protein
SIO_000068: ncbiprotein

position:7056005:1
position: 7056005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7118073:1
position: 7118073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7056005-7056046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7100865-7100953:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7105763-7106018:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7107531-7107866:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7115151-7115354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7117675-7118073:1:exon

CAV3
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: CAV3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7150118..7170274
location: region:7150118-7170274:1
so has part: feature:7150118-7170274:1:exon
subclass of: SO_0000010

105869098
type: Gene
SIO_000068: ncbigene

position:7150118:1
position: 7150118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7170274:1
position: 7170274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7150118-7170274:1:exon

CAV3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: CAV3
product: caveolin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012760704.1
SIO_010081: CAV3
subclass of: SO_0000673
so part of: CAV3
location: join(7150118..7150307,7169700..7170274)
location: region:7150118-7170274:1
so has part: feature:7150118-7150307:1:exon
so has part: feature:7169700-7170274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7150118-7150307:1:exon

position:7150307:1
position: 7150307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7169700-7170274:1:exon

position:7169700:1
position: 7169700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CAV3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: CAV3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caveolin-3
translation: MMAEERSDLEAQIVKDIHFKEIDLVNRDPKNINEDIVKVDFEDVIAEPVGTYSFDGVWKASYTTFTVSKYWCYRLLSTLLGVPLALLWGFLFACISFGHIWAVVPCVKSYLIGVQCASHVYSLCVRTFCNPLFAALGQACGSIKVLLRKEV
SIO_010081: CAV3
subclass of: SO_0000673
so part of: CAV3
location: join(7150194..7150307,7169700..7170041)
location: region:7150194-7170041:1
so has part: feature:7150194-7150307:1:exon
so has part: feature:7169700-7170041:1:exon

XP_012616158.1
type: Protein
SIO_000068: ncbiprotein

position:7150194:1
position: 7150194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7170041:1
position: 7170041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7150194-7150307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7169700-7170041:1:exon

OXTR
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: OXTR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7175181..7186091)
location: region:7175181-7186091:-1
so has part: feature:7175181-7186091:-1:exon
subclass of: SO_0000010

105868976
type: Gene
SIO_000068: ncbigene

position:7175181:-1
position: 7175181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7186091:-1
position: 7186091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7175181-7186091:-1:exon

OXTR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: OXTR
product: oxytocin receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 28 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284221.1
SIO_010081: OXTR
subclass of: SO_0000673
so part of: OXTR
location: complement(join(7175181..7178162,7183807..7184787,7184961..7185051,7185615..7186091))
location: region:7175181-7186091:-1
so has part: feature:7185615-7186091:-1:exon
so has part: feature:7184961-7185051:-1:exon
so has part: feature:7183807-7184787:-1:exon
so has part: feature:7175181-7178162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7185615-7186091:-1:exon

position:7185615:-1
position: 7185615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7184961-7185051:-1:exon

position:7184961:-1
position: 7184961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7185051:-1
position: 7185051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7183807-7184787:-1:exon

position:7183807:-1
position: 7183807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7184787:-1
position: 7184787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7175181-7178162:-1:exon

position:7178162:-1
position: 7178162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OXTR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: OXTR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxytocin receptor
translation: MPGNASAPRHPALGQPHSPSLLTARESAASKPRKEETRRVIYEVLSPPRVSTPCKINPSVTGPGDLAGASRPAPTQRTRVTTAQPDAARSLGAAGSLCPRLAGLRARGRHPPPEAAAPERRRGAPAASPTRPGARADSAARGATAPRGPTQGSPAGSAQRKLLDILGSRRWCRQFPLVCSSSAWLRGGEGWDPAEPPAESRASPGGLRRAGLGAARMEGWGAGAANASAAPPGAGGNHTAGPPRRDEALARVEVAVLCLILVLALGGNACVLLALRTTRHKHSRLFFFMKHLSIADLVVAVFQVLPQLLWDITFRFYGPDLLCRLVKYLQVVGMFASTYLLLLMSLDRCLAICRPLRPRRRRTDRLAVLATWLGCLAASAPQVHIFSLREVADGVFDCWAVFIQPWGPKAYVTWITLAVYIVPVFVLAACYGLISLKIWQNLRLKTAAAAAAEAPEGAAGAGRAALARVSSVKLISKAKIRTVKMTFVIVLAFIVCWTPFFFVQMWSVWDADAPKEASAFIIAMLLASLNSCCNPWIYMLFTGHLFHELVQRFLCCPSSRQQGSRPGETSLSRKSGSSSFVLSRRSSSQRSGSQPTVA
SIO_010081: OXTR
subclass of: SO_0000673
so part of: OXTR
location: complement(join(7177915..7178162,7183807..7184787,7184961..7185051,7185615..7186091))
location: region:7177915-7186091:-1
so has part: feature:7185615-7186091:-1:exon
so has part: feature:7184961-7185051:-1:exon
so has part: feature:7183807-7184787:-1:exon
so has part: feature:7177915-7178162:-1:exon

XP_020139810.1
type: Protein
SIO_000068: ncbiprotein

position:7177915:-1
position: 7177915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7185615-7186091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7184961-7185051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7183807-7184787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7177915-7178162:-1:exon

RAD18
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: RAD18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7233099..7282179)
location: region:7233099-7282179:-1
so has part: feature:7233099-7282179:-1:exon
subclass of: SO_0000010

105869090
type: Gene
SIO_000068: ncbigene

position:7233099:-1
position: 7233099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7282179:-1
position: 7282179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7233099-7282179:-1:exon

RAD18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: RAD18
product: RAD18, E3 ubiquitin protein ligase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012760692.1
SIO_010081: RAD18
subclass of: SO_0000673
so part of: RAD18
location: complement(join(7233099..7233950,7237207..7237269,7246910..7247081,7250368..7250508,7256818..7256878,7258240..7258316,7260794..7260978,7265656..7265755,7268275..7268612,7272659..7272729,7273924..7273985,7276319..7276400,7276449..7276505,7282041..7282179))
location: region:7233099-7282179:-1
so has part: feature:7282041-7282179:-1:exon
so has part: feature:7276449-7276505:-1:exon
so has part: feature:7276319-7276400:-1:exon
so has part: feature:7273924-7273985:-1:exon
so has part: feature:7272659-7272729:-1:exon
so has part: feature:7268275-7268612:-1:exon
so has part: feature:7265656-7265755:-1:exon
so has part: feature:7260794-7260978:-1:exon
so has part: feature:7258240-7258316:-1:exon
so has part: feature:7256818-7256878:-1:exon
so has part: feature:7250368-7250508:-1:exon
so has part: feature:7246910-7247081:-1:exon
so has part: feature:7237207-7237269:-1:exon
so has part: feature:7233099-7233950:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7282041-7282179:-1:exon

position:7282041:-1
position: 7282041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7276449-7276505:-1:exon

position:7276449:-1
position: 7276449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7276505:-1
position: 7276505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7276319-7276400:-1:exon

position:7276319:-1
position: 7276319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7276400:-1
position: 7276400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7273924-7273985:-1:exon

position:7273924:-1
position: 7273924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7273985:-1
position: 7273985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7272659-7272729:-1:exon

position:7272659:-1
position: 7272659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7272729:-1
position: 7272729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7268275-7268612:-1:exon

position:7268275:-1
position: 7268275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7268612:-1
position: 7268612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7265656-7265755:-1:exon

position:7265656:-1
position: 7265656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7265755:-1
position: 7265755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7260794-7260978:-1:exon

position:7260794:-1
position: 7260794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7260978:-1
position: 7260978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7258240-7258316:-1:exon

position:7258240:-1
position: 7258240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7258316:-1
position: 7258316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7256818-7256878:-1:exon

position:7256818:-1
position: 7256818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7256878:-1
position: 7256878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7250368-7250508:-1:exon

position:7250368:-1
position: 7250368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7250508:-1
position: 7250508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7246910-7247081:-1:exon

position:7246910:-1
position: 7246910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7247081:-1
position: 7247081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7237207-7237269:-1:exon

position:7237207:-1
position: 7237207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7237269:-1
position: 7237269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7233099-7233950:-1:exon

position:7233950:-1
position: 7233950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAD18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: RAD18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RAD18
translation: MDSLAEPRWPPGLAVMKTIDDLLRCGICFEYFNIAMTIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKNNRILDELVKSLNFARNHLSQFALESPPISPASSSSKHLAAKAHTPVAFRHSLKQGSKSVDTYLVRETGGSTSELLIRENKSRFSPRKEASTTAETVETHSVGKMAPGSSDARGPESPSTSTLKLVTKVDCPVCGVNIPESHINKHLDSCLSREEKKESLRSSVHKRKPLPKTVYNLLSDRDLKKKLKQHGLSVQGTKQQLIKRHQEFVHMYNAQCDALHPKSAAEIVQEIENMEKTRMRLEASKLNESVMVFTKDQTEKEIEEIHSKYRKKHQNEFQLLVDQAKKGYKKTVGMSQKTVTTKQEDEATEKLLSVCMGKEDNKMKFSDLTSVTDYFPKSQLGSSGKLESERPDDSSSCTDIQEVPSSLESDSCNSSSSDIIRDLLEEEEAWEASHKNDLQDTEISPRQNRRTREPESAEIEPRNKRNRN
SIO_010081: RAD18
subclass of: SO_0000673
so part of: RAD18
location: complement(join(7233848..7233950,7237207..7237269,7246910..7247081,7250368..7250508,7256818..7256878,7258240..7258316,7260794..7260978,7265656..7265755,7268275..7268612,7272659..7272729,7273924..7273985,7276319..7276400,7276449..7276505,7282041..7282091))
location: region:7233848-7282091:-1
so has part: feature:7282041-7282091:-1:exon
so has part: feature:7276449-7276505:-1:exon
so has part: feature:7276319-7276400:-1:exon
so has part: feature:7273924-7273985:-1:exon
so has part: feature:7272659-7272729:-1:exon
so has part: feature:7268275-7268612:-1:exon
so has part: feature:7265656-7265755:-1:exon
so has part: feature:7260794-7260978:-1:exon
so has part: feature:7258240-7258316:-1:exon
so has part: feature:7256818-7256878:-1:exon
so has part: feature:7250368-7250508:-1:exon
so has part: feature:7246910-7247081:-1:exon
so has part: feature:7237207-7237269:-1:exon
so has part: feature:7233848-7233950:-1:exon

XP_012616146.1
type: Protein
SIO_000068: ncbiprotein

position:7233848:-1
position: 7233848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7282091:-1
position: 7282091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7282041-7282091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7276449-7276505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7276319-7276400:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7273924-7273985:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7272659-7272729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7268275-7268612:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7265656-7265755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7260794-7260978:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7258240-7258316:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7256818-7256878:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7250368-7250508:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7246910-7247081:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7237207-7237269:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7233848-7233950:-1:exon

SRGAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 30608
gene: SRGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7293551..7371002)
location: region:7293551-7371002:-1
so has part: feature:7293551-7371002:-1:exon
subclass of: SO_0000010

105869066
type: Gene
SIO_000068: ncbigene

position:7293551:-1
position: 7293551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7371002:-1
position: 7371002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7293551-7371002:-1:exon

SRGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SRGAP3
product: SLIT-ROBO Rho GTPase activating protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_020284240.1
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: complement(join(7293551..7294893,7301516..7301843,7304428..7304580,7305970..7306150,7310335..7310414,7312071..7312298,7312914..7313019,7316446..7316580,7319969..7320046,7322775..7322835,7327640..7327742,7336530..7336557,7340264..7340348,7342390..7342587,7343600..7343701,7346700..7346921,7359334..7359396,7368236..7368398,7370734..7371002))
location: region:7293551-7371002:-1
so has part: feature:7370734-7371002:-1:exon
so has part: feature:7368236-7368398:-1:exon
so has part: feature:7359334-7359396:-1:exon
so has part: feature:7346700-7346921:-1:exon
so has part: feature:7343600-7343701:-1:exon
so has part: feature:7342390-7342587:-1:exon
so has part: feature:7340264-7340348:-1:exon
so has part: feature:7336530-7336557:-1:exon
so has part: feature:7327640-7327742:-1:exon
so has part: feature:7322775-7322835:-1:exon
so has part: feature:7319969-7320046:-1:exon
so has part: feature:7316446-7316580:-1:exon
so has part: feature:7312914-7313019:-1:exon
so has part: feature:7312071-7312298:-1:exon
so has part: feature:7310335-7310414:-1:exon
so has part: feature:7305970-7306150:-1:exon
so has part: feature:7304428-7304580:-1:exon
so has part: feature:7301516-7301843:-1:exon
so has part: feature:7293551-7294893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7370734-7371002:-1:exon

position:7370734:-1
position: 7370734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7368236-7368398:-1:exon

position:7368236:-1
position: 7368236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7368398:-1
position: 7368398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7359334-7359396:-1:exon

position:7359334:-1
position: 7359334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7359396:-1
position: 7359396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7346700-7346921:-1:exon

position:7346700:-1
position: 7346700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7346921:-1
position: 7346921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7343600-7343701:-1:exon

position:7343600:-1
position: 7343600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7343701:-1
position: 7343701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7342390-7342587:-1:exon

position:7342390:-1
position: 7342390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7342587:-1
position: 7342587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7340264-7340348:-1:exon

position:7340264:-1
position: 7340264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7340348:-1
position: 7340348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7336530-7336557:-1:exon

position:7336530:-1
position: 7336530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7336557:-1
position: 7336557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7327640-7327742:-1:exon

position:7327640:-1
position: 7327640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7327742:-1
position: 7327742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7322775-7322835:-1:exon

position:7322775:-1
position: 7322775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7322835:-1
position: 7322835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7319969-7320046:-1:exon

position:7319969:-1
position: 7319969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7320046:-1
position: 7320046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7316446-7316580:-1:exon

position:7316446:-1
position: 7316446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7316580:-1
position: 7316580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7312914-7313019:-1:exon

position:7312914:-1
position: 7312914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7313019:-1
position: 7313019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7312071-7312298:-1:exon

position:7312071:-1
position: 7312071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7312298:-1
position: 7312298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7310335-7310414:-1:exon

position:7310335:-1
position: 7310335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7310414:-1
position: 7310414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7305970-7306150:-1:exon

position:7305970:-1
position: 7305970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7306150:-1
position: 7306150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7304428-7304580:-1:exon

position:7304428:-1
position: 7304428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7304580:-1
position: 7304580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7301516-7301843:-1:exon

position:7301516:-1
position: 7301516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7301843:-1
position: 7301843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7293551-7294893:-1:exon

position:7294893:-1
position: 7294893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SRGAP3
product: SLIT-ROBO Rho GTPase activating protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012760643.2
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: complement(join(7293551..7294893,7301516..7301843,7304428..7304580,7305970..7306150,7310335..7310414,7312071..7312298,7312914..7313019,7316446..7316580,7319969..7320046,7322775..7322835,7327640..7327742,7336530..7336557,7340264..7340348,7342390..7342587,7343600..7343701,7346700..7346921,7349896..7350024,7355039..7355224,7359334..7359396,7368236..7368398,7370734..7370999))
location: region:7293551-7370999:-1
so has part: feature:7370734-7370999:-1:exon
so has part: feature:7368236-7368398:-1:exon
so has part: feature:7359334-7359396:-1:exon
so has part: feature:7355039-7355224:-1:exon
so has part: feature:7349896-7350024:-1:exon
so has part: feature:7346700-7346921:-1:exon
so has part: feature:7343600-7343701:-1:exon
so has part: feature:7342390-7342587:-1:exon
so has part: feature:7340264-7340348:-1:exon
so has part: feature:7336530-7336557:-1:exon
so has part: feature:7327640-7327742:-1:exon
so has part: feature:7322775-7322835:-1:exon
so has part: feature:7319969-7320046:-1:exon
so has part: feature:7316446-7316580:-1:exon
so has part: feature:7312914-7313019:-1:exon
so has part: feature:7312071-7312298:-1:exon
so has part: feature:7310335-7310414:-1:exon
so has part: feature:7305970-7306150:-1:exon
so has part: feature:7304428-7304580:-1:exon
so has part: feature:7301516-7301843:-1:exon
so has part: feature:7293551-7294893:-1:exon

position:7370999:-1
position: 7370999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7370734-7370999:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7368236-7368398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7359334-7359396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7355039-7355224:-1:exon

position:7355039:-1
position: 7355039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7355224:-1
position: 7355224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7349896-7350024:-1:exon

position:7349896:-1
position: 7349896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7350024:-1
position: 7350024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7346700-7346921:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7343600-7343701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7342390-7342587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7340264-7340348:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7336530-7336557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7327640-7327742:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7322775-7322835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7319969-7320046:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7316446-7316580:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7312914-7313019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7312071-7312298:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7310335-7310414:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7305970-7306150:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7304428-7304580:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7301516-7301843:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7293551-7294893:-1:exon

SRGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SRGAP3
product: SLIT-ROBO Rho GTPase activating protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_012760644.2
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: complement(join(7293551..7294893,7301516..7301843,7304428..7304580,7305970..7306150,7310335..7310414,7312071..7312298,7312914..7313019,7316446..7316580,7319969..7320046,7322775..7322835,7324628..7324658,7336530..7336557,7340264..7340348,7342390..7342587,7343600..7343701,7346700..7346921,7349896..7350024,7355039..7355224,7359334..7359396,7368236..7368398,7370734..7370997))
location: region:7293551-7370997:-1
so has part: feature:7370734-7370997:-1:exon
so has part: feature:7368236-7368398:-1:exon
so has part: feature:7359334-7359396:-1:exon
so has part: feature:7355039-7355224:-1:exon
so has part: feature:7349896-7350024:-1:exon
so has part: feature:7346700-7346921:-1:exon
so has part: feature:7343600-7343701:-1:exon
so has part: feature:7342390-7342587:-1:exon
so has part: feature:7340264-7340348:-1:exon
so has part: feature:7336530-7336557:-1:exon
so has part: feature:7324628-7324658:-1:exon
so has part: feature:7322775-7322835:-1:exon
so has part: feature:7319969-7320046:-1:exon
so has part: feature:7316446-7316580:-1:exon
so has part: feature:7312914-7313019:-1:exon
so has part: feature:7312071-7312298:-1:exon
so has part: feature:7310335-7310414:-1:exon
so has part: feature:7305970-7306150:-1:exon
so has part: feature:7304428-7304580:-1:exon
so has part: feature:7301516-7301843:-1:exon
so has part: feature:7293551-7294893:-1:exon

position:7370997:-1
position: 7370997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7370734-7370997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7368236-7368398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7359334-7359396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7355039-7355224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7349896-7350024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7346700-7346921:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7343600-7343701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7342390-7342587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7340264-7340348:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7336530-7336557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7324628-7324658:-1:exon

position:7324628:-1
position: 7324628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7324658:-1
position: 7324658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7322775-7322835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7319969-7320046:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7316446-7316580:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7312914-7313019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7312071-7312298:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7310335-7310414:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7305970-7306150:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7304428-7304580:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7301516-7301843:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7293551-7294893:-1:exon

SRGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SRGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SLIT-ROBO Rho GTPase-activating protein 3 isoform X3
translation: MFWLHTLILYRLSQSDRCAHRPDSVPRTQKDQYLLSPVNCWYLVLHQTRRESRDHATLNDIFTNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLNVTNELYTCCDLGFHASLARTFRTYLSAEYNLETSRHEGLDVIENAVDGLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVCQVSAQQPVQTELLVRHQQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQHSRSTESVKSAASETYMSKVKVAKRRANQQETEVFYFTKFKEYVNGSNLITKLQAKHDLLKQTLGEGERAEFGTTRPPCLPPKPQKMRRPRPLSVCGHRLFNGSMEAFIQDSGQAIPLVVESCIRYINLYGLQQQGVFRVPGSQVEVSDIRNSFERGEDPLVDDQNERDINSVAGVLKLYFRGLENPLFPKERFQDLISAIKLENLAERVHQIQQILVTLPRVVIVVMRYLFAFLNHLSQYSDENMMDPYNLAICFGPTLMHIPDGQDPVSCQAHVNEVIKTIIIHHEAIFPSPRELEGPVYEKCMAGGEEYCDSPHSEPGTIDEVDHDNGTEPHTSDEEVEQIEAIAKFDYVGRSPRELSFKKGASLLLCHRASEDWWEGRHNGVDGLIPHQYIVVQDMDDAFSDSLSQKADSEASSGPLLDDKASSKNDLQSPTEQHLVDCGFGGVMGRVRLRSDGAAIPRRRSGGDTHSPPRGGLGPGMDAPPRAAACPSSPHKAPLARGRIESPEKRRMATFGSAGSINYPDRKALSEGHPLRPGGSTRHSSLGDHKSLEAEALAEDIEKTMSTALHELRELERQNAAKQAPDVVLDTLEPLKHPPGPASSEPASPLHTIAIRDPDAAMRRSSSSSAEMMTTFKPALSARLAGAQLRPPPCVRPARPAAQHRSSSSSSSGVGSPAVTPTEKGFPGGGGGPADKSGTM
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: complement(join(7294468..7294893,7301516..7301843,7304428..7304580,7305970..7306150,7310335..7310414,7312071..7312298,7312914..7313019,7316446..7316580,7319969..7320046,7322775..7322835,7327640..7327742,7336530..7336557,7340264..7340348,7342390..7342587,7343600..7343701,7346700..7346921,7359334..7359396,7368236..7368398,7370734..7370819))
location: region:7294468-7370819:-1
so has part: feature:7370734-7370819:-1:exon
so has part: feature:7368236-7368398:-1:exon
so has part: feature:7359334-7359396:-1:exon
so has part: feature:7346700-7346921:-1:exon
so has part: feature:7343600-7343701:-1:exon
so has part: feature:7342390-7342587:-1:exon
so has part: feature:7340264-7340348:-1:exon
so has part: feature:7336530-7336557:-1:exon
so has part: feature:7327640-7327742:-1:exon
so has part: feature:7322775-7322835:-1:exon
so has part: feature:7319969-7320046:-1:exon
so has part: feature:7316446-7316580:-1:exon
so has part: feature:7312914-7313019:-1:exon
so has part: feature:7312071-7312298:-1:exon
so has part: feature:7310335-7310414:-1:exon
so has part: feature:7305970-7306150:-1:exon
so has part: feature:7304428-7304580:-1:exon
so has part: feature:7301516-7301843:-1:exon
so has part: feature:7294468-7294893:-1:exon

XP_020139829.1
type: Protein
SIO_000068: ncbiprotein

position:7294468:-1
position: 7294468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7370819:-1
position: 7370819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7370734-7370819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7368236-7368398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7359334-7359396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7346700-7346921:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7343600-7343701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7342390-7342587:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7340264-7340348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7336530-7336557:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7327640-7327742:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7322775-7322835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7319969-7320046:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7316446-7316580:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7312914-7313019:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7312071-7312298:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7310335-7310414:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7305970-7306150:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7304428-7304580:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7301516-7301843:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7294468-7294893:-1:exon

SRGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SRGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SLIT-ROBO Rho GTPase-activating protein 3 isoform X2
translation: MFWLHTLILYRLSQSDRCAHRPDSVPRTQKDQYLLSPVNCWYLVLHQTRRESRDHATLNDIFTNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLNVTNELYTVMKTYHMYHAESLSAESKLKEAERQEEKQFSKAGELGANLLRLEERPQRRSSVKKIEKMKEKRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDASDLIDCCDLGFHASLARTFRTYLSAEYNLETSRHEGLDVIENAVDGLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVCQVSAQQPVQTELLVRHQQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQHSRSTESVKSAASETYMSKVKVAKRRANQQETEVFYFTKFKEYVNGSNLITKLQAKHDLLKQTLGEGERAEFGTTRGRRNARTRNQDSGQAIPLVVESCIRYINLYGLQQQGVFRVPGSQVEVSDIRNSFERGEDPLVDDQNERDINSVAGVLKLYFRGLENPLFPKERFQDLISAIKLENLAERVHQIQQILVTLPRVVIVVMRYLFAFLNHLSQYSDENMMDPYNLAICFGPTLMHIPDGQDPVSCQAHVNEVIKTIIIHHEAIFPSPRELEGPVYEKCMAGGEEYCDSPHSEPGTIDEVDHDNGTEPHTSDEEVEQIEAIAKFDYVGRSPRELSFKKGASLLLCHRASEDWWEGRHNGVDGLIPHQYIVVQDMDDAFSDSLSQKADSEASSGPLLDDKASSKNDLQSPTEQHLVDCGFGGVMGRVRLRSDGAAIPRRRSGGDTHSPPRGGLGPGMDAPPRAAACPSSPHKAPLARGRIESPEKRRMATFGSAGSINYPDRKALSEGHPLRPGGSTRHSSLGDHKSLEAEALAEDIEKTMSTALHELRELERQNAAKQAPDVVLDTLEPLKHPPGPASSEPASPLHTIAIRDPDAAMRRSSSSSAEMMTTFKPALSARLAGAQLRPPPCVRPARPAAQHRSSSSSSSGVGSPAVTPTEKGFPGGGGGPADKSGTM
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: complement(join(7294468..7294893,7301516..7301843,7304428..7304580,7305970..7306150,7310335..7310414,7312071..7312298,7312914..7313019,7316446..7316580,7319969..7320046,7322775..7322835,7324628..7324658,7336530..7336557,7340264..7340348,7342390..7342587,7343600..7343701,7346700..7346921,7349896..7350024,7355039..7355224,7359334..7359396,7368236..7368398,7370734..7370819))
location: region:7294468-7370819:-1
so has part: feature:7370734-7370819:-1:exon
so has part: feature:7368236-7368398:-1:exon
so has part: feature:7359334-7359396:-1:exon
so has part: feature:7355039-7355224:-1:exon
so has part: feature:7349896-7350024:-1:exon
so has part: feature:7346700-7346921:-1:exon
so has part: feature:7343600-7343701:-1:exon
so has part: feature:7342390-7342587:-1:exon
so has part: feature:7340264-7340348:-1:exon
so has part: feature:7336530-7336557:-1:exon
so has part: feature:7324628-7324658:-1:exon
so has part: feature:7322775-7322835:-1:exon
so has part: feature:7319969-7320046:-1:exon
so has part: feature:7316446-7316580:-1:exon
so has part: feature:7312914-7313019:-1:exon
so has part: feature:7312071-7312298:-1:exon
so has part: feature:7310335-7310414:-1:exon
so has part: feature:7305970-7306150:-1:exon
so has part: feature:7304428-7304580:-1:exon
so has part: feature:7301516-7301843:-1:exon
so has part: feature:7294468-7294893:-1:exon

XP_012616098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7370734-7370819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7368236-7368398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7359334-7359396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7355039-7355224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7349896-7350024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7346700-7346921:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7343600-7343701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7342390-7342587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7340264-7340348:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7336530-7336557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7324628-7324658:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7322775-7322835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7319969-7320046:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7316446-7316580:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7312914-7313019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7312071-7312298:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7310335-7310414:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7305970-7306150:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7304428-7304580:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7301516-7301843:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7294468-7294893:-1:exon

SRGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SRGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SLIT-ROBO Rho GTPase-activating protein 3 isoform X1
translation: MFWLHTLILYRLSQSDRCAHRPDSVPRTQKDQYLLSPVNCWYLVLHQTRRESRDHATLNDIFTNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLNVTNELYTVMKTYHMYHAESLSAESKLKEAERQEEKQFSKAGELGANLLRLEERPQRRSSVKKIEKMKEKRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDASDLIDCCDLGFHASLARTFRTYLSAEYNLETSRHEGLDVIENAVDGLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVCQVSAQQPVQTELLVRHQQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQHSRSTESVKSAASETYMSKVKVAKRRANQQETEVFYFTKFKEYVNGSNLITKLQAKHDLLKQTLGEGERAEFGTTRPPCLPPKPQKMRRPRPLSVCGHRLFNGSMEAFIQDSGQAIPLVVESCIRYINLYGLQQQGVFRVPGSQVEVSDIRNSFERGEDPLVDDQNERDINSVAGVLKLYFRGLENPLFPKERFQDLISAIKLENLAERVHQIQQILVTLPRVVIVVMRYLFAFLNHLSQYSDENMMDPYNLAICFGPTLMHIPDGQDPVSCQAHVNEVIKTIIIHHEAIFPSPRELEGPVYEKCMAGGEEYCDSPHSEPGTIDEVDHDNGTEPHTSDEEVEQIEAIAKFDYVGRSPRELSFKKGASLLLCHRASEDWWEGRHNGVDGLIPHQYIVVQDMDDAFSDSLSQKADSEASSGPLLDDKASSKNDLQSPTEQHLVDCGFGGVMGRVRLRSDGAAIPRRRSGGDTHSPPRGGLGPGMDAPPRAAACPSSPHKAPLARGRIESPEKRRMATFGSAGSINYPDRKALSEGHPLRPGGSTRHSSLGDHKSLEAEALAEDIEKTMSTALHELRELERQNAAKQAPDVVLDTLEPLKHPPGPASSEPASPLHTIAIRDPDAAMRRSSSSSAEMMTTFKPALSARLAGAQLRPPPCVRPARPAAQHRSSSSSSSGVGSPAVTPTEKGFPGGGGGPADKSGTM
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: complement(join(7294468..7294893,7301516..7301843,7304428..7304580,7305970..7306150,7310335..7310414,7312071..7312298,7312914..7313019,7316446..7316580,7319969..7320046,7322775..7322835,7327640..7327742,7336530..7336557,7340264..7340348,7342390..7342587,7343600..7343701,7346700..7346921,7349896..7350024,7355039..7355224,7359334..7359396,7368236..7368398,7370734..7370819))
location: region:7294468-7370819:-1
so has part: feature:7370734-7370819:-1:exon
so has part: feature:7368236-7368398:-1:exon
so has part: feature:7359334-7359396:-1:exon
so has part: feature:7355039-7355224:-1:exon
so has part: feature:7349896-7350024:-1:exon
so has part: feature:7346700-7346921:-1:exon
so has part: feature:7343600-7343701:-1:exon
so has part: feature:7342390-7342587:-1:exon
so has part: feature:7340264-7340348:-1:exon
so has part: feature:7336530-7336557:-1:exon
so has part: feature:7327640-7327742:-1:exon
so has part: feature:7322775-7322835:-1:exon
so has part: feature:7319969-7320046:-1:exon
so has part: feature:7316446-7316580:-1:exon
so has part: feature:7312914-7313019:-1:exon
so has part: feature:7312071-7312298:-1:exon
so has part: feature:7310335-7310414:-1:exon
so has part: feature:7305970-7306150:-1:exon
so has part: feature:7304428-7304580:-1:exon
so has part: feature:7301516-7301843:-1:exon
so has part: feature:7294468-7294893:-1:exon

XP_012616097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7370734-7370819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7368236-7368398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7359334-7359396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7355039-7355224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7349896-7350024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7346700-7346921:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7343600-7343701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7342390-7342587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7340264-7340348:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7336530-7336557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7327640-7327742:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7322775-7322835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7319969-7320046:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7316446-7316580:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7312914-7313019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7312071-7312298:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7310335-7310414:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7305970-7306150:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7304428-7304580:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7301516-7301843:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7294468-7294893:-1:exon

SRGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30608
gene: SRGAP3
product: SLIT-ROBO Rho GTPase activating protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012760646.2
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: complement(join(7294779..7294893,7304428..7304580,7305970..7306150,7310335..7310414,7312071..7312298,7312914..7313019,7316446..7316580,7319969..7320046,7322775..7322835,7327640..7327742,7336530..7336557,7340264..7340348,7342390..7342587,7343600..7343701,7346700..7346921,7349896..7350024,7355039..7355224,7359334..7359396,7368236..7368398,7370734..7370989))
location: region:7294779-7370989:-1
so has part: feature:7370734-7370989:-1:exon
so has part: feature:7368236-7368398:-1:exon
so has part: feature:7359334-7359396:-1:exon
so has part: feature:7355039-7355224:-1:exon
so has part: feature:7349896-7350024:-1:exon
so has part: feature:7346700-7346921:-1:exon
so has part: feature:7343600-7343701:-1:exon
so has part: feature:7342390-7342587:-1:exon
so has part: feature:7340264-7340348:-1:exon
so has part: feature:7336530-7336557:-1:exon
so has part: feature:7327640-7327742:-1:exon
so has part: feature:7322775-7322835:-1:exon
so has part: feature:7319969-7320046:-1:exon
so has part: feature:7316446-7316580:-1:exon
so has part: feature:7312914-7313019:-1:exon
so has part: feature:7312071-7312298:-1:exon
so has part: feature:7310335-7310414:-1:exon
so has part: feature:7305970-7306150:-1:exon
so has part: feature:7304428-7304580:-1:exon
so has part: feature:7294779-7294893:-1:exon

position:7294779:-1
position: 7294779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7370989:-1
position: 7370989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7370734-7370989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7368236-7368398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7359334-7359396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7355039-7355224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7349896-7350024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7346700-7346921:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7343600-7343701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7342390-7342587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7340264-7340348:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7336530-7336557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7327640-7327742:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7322775-7322835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7319969-7320046:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7316446-7316580:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7312914-7313019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7312071-7312298:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7310335-7310414:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7305970-7306150:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7304428-7304580:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7294779-7294893:-1:exon

SRGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30608
gene: SRGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SLIT-ROBO Rho GTPase-activating protein 3 isoform X4
translation: MFWLHTLILYRLSQSDRCAHRPDSVPRTQKDQYLLSPVNCWYLVLHQTRRESRDHATLNDIFTNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELLNVTNELYTVMKTYHMYHAESLSAESKLKEAERQEEKQFSKAGELGANLLRLEERPQRRSSVKKIEKMKEKRQAKYSENKLKCTKARNDYLLNLAATNAAISKYYIHDASDLIDCCDLGFHASLARTFRTYLSAEYNLETSRHEGLDVIENAVDGLDSRSDKHTVMDMCNQVFCPPLKFEFQPHMGDEVCQVSAQQPVQTELLVRHQQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQHSRSTESVKSAASETYMSKVKVAKRRANQQETEVFYFTKFKEYVNGSNLITKLQAKHDLLKQTLGEGERAEFGTTRPPCLPPKPQKMRRPRPLSVCGHRLFNGSMEAFIQDSGQAIPLVVESCIRYINLYGLQQQGVFRVPGSQVEVSDIRNSFERGEDPLVDDQNERDINSVAGVLKLYFRGLENPLFPKERFQDLISAIKLENLAERVHQIQQILVTLPRVVIVVMRYLFAFLNHLSQYSDENMMDPYNLAICFGPTLMHIPDGQDPVSCQAHVNEVIKTIIIHHEAIFPSPRELEGPVYEKCMAGGEEYCDSPHSEPGTIDEVDHDNGTEPHTSDEEVEQIEAIAKFDYVGRSPRELSFKKGASLLLCHRASEDWWEGRHNGVDGLIPHQYIVVQDMDDAFSDSLSQKADSEASSGPLLDDKASSKNDLQSPTEQHLVDCGFGGVMGRTSRRP
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: complement(join(7294875..7294893,7304428..7304580,7305970..7306150,7310335..7310414,7312071..7312298,7312914..7313019,7316446..7316580,7319969..7320046,7322775..7322835,7327640..7327742,7336530..7336557,7340264..7340348,7342390..7342587,7343600..7343701,7346700..7346921,7349896..7350024,7355039..7355224,7359334..7359396,7368236..7368398,7370734..7370819))
location: region:7294875-7370819:-1
so has part: feature:7370734-7370819:-1:exon
so has part: feature:7368236-7368398:-1:exon
so has part: feature:7359334-7359396:-1:exon
so has part: feature:7355039-7355224:-1:exon
so has part: feature:7349896-7350024:-1:exon
so has part: feature:7346700-7346921:-1:exon
so has part: feature:7343600-7343701:-1:exon
so has part: feature:7342390-7342587:-1:exon
so has part: feature:7340264-7340348:-1:exon
so has part: feature:7336530-7336557:-1:exon
so has part: feature:7327640-7327742:-1:exon
so has part: feature:7322775-7322835:-1:exon
so has part: feature:7319969-7320046:-1:exon
so has part: feature:7316446-7316580:-1:exon
so has part: feature:7312914-7313019:-1:exon
so has part: feature:7312071-7312298:-1:exon
so has part: feature:7310335-7310414:-1:exon
so has part: feature:7305970-7306150:-1:exon
so has part: feature:7304428-7304580:-1:exon
so has part: feature:7294875-7294893:-1:exon

XP_012616100.1
type: Protein
SIO_000068: ncbiprotein

position:7294875:-1
position: 7294875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7370734-7370819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7368236-7368398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7359334-7359396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7355039-7355224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7349896-7350024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7346700-7346921:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7343600-7343701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7342390-7342587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7340264-7340348:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7336530-7336557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7327640-7327742:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7322775-7322835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7319969-7320046:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7316446-7316580:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7312914-7313019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7312071-7312298:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7310335-7310414:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7305970-7306150:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7304428-7304580:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7294875-7294893:-1:exon

SRGAP3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30608
gene: SRGAP3
product: SLIT-ROBO Rho GTPase activating protein 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002222710.1
SIO_010081: SRGAP3
so part of: SRGAP3
location: complement(join(7310336..7310414,7312071..7312298,7312914..7313019,7316446..7316580,7319969..7320046,7322775..7322835,7336530..7336557,7340264..7340348,7342390..7342587,7343600..7343701,7346700..7346921,7349896..7350024,7355039..7355224,7359334..7359396,7368236..7368398,7370734..7370990))
location: region:7310336-7370990:-1
so has part: feature:7370734-7370990:-1:exon
so has part: feature:7368236-7368398:-1:exon
so has part: feature:7359334-7359396:-1:exon
so has part: feature:7355039-7355224:-1:exon
so has part: feature:7349896-7350024:-1:exon
so has part: feature:7346700-7346921:-1:exon
so has part: feature:7343600-7343701:-1:exon
so has part: feature:7342390-7342587:-1:exon
so has part: feature:7340264-7340348:-1:exon
so has part: feature:7336530-7336557:-1:exon
so has part: feature:7322775-7322835:-1:exon
so has part: feature:7319969-7320046:-1:exon
so has part: feature:7316446-7316580:-1:exon
so has part: feature:7312914-7313019:-1:exon
so has part: feature:7312071-7312298:-1:exon
so has part: feature:7310336-7310414:-1:exon

position:7310336:-1
position: 7310336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7370990:-1
position: 7370990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7370734-7370990:-1:exon