Bos indicus x Bos taurus breed Angus x Brahman F1 hybrid chromosome 28, Bos_hybrid_MaternalHap_v2.0, whole genome shotgun sequence.
type: Entry
definition: Bos indicus x Bos taurus breed Angus x Brahman F1 hybrid chromosome 28, Bos_hybrid_MaternalHap_v2.0, whole genome shotgun sequence.
sequence version: NC_040103.1
sequence date: 2018-12-25
sequence: sequence
division: CON
label: NC_040103.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA508959
dblink: SAMN08473802
keyword: WGS
keyword: RefSeq
source: Bos indicus x Bos taurus (hybrid cattle)
organism: Bos indicus x Bos taurus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos hybrids.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM011831.1.\nAssembly name: Bos_hybrid_MaternalHap_v2.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of Adelaide on\n2018/11/30. The original whole-genome shotgun project has the\naccession PUFS00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of Adelaide\nAssembly Method :: TrioCanu v. 1.6\nAssembly Name :: Bos_hybrid_MaternalHap_v2.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 136.0x\nSequencing Technology :: PacBio Sequel; PacBio RSII; Illumina\n NextSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Bos indicus x Bos taurus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 45896848
topology: linear
so has quality: SO_0000987
location: 1..45896848
location: region:1-45896848:1
RO_0002162: 30522

NC_040103
type: RefSeq
SIO_000068: refseq

PRJNA508959
type: BioProject
SIO_000068: bioproject

SAMN08473802
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45896848:1
position: 45896848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-45896848:1:source
so part of: sequence
organism: Bos indicus x Bos taurus
mol type: genomic DNA
chromosome: 28
sex: male
tissue type: lung
dev stage: fetus
collected by: Stefan Hiendleder
breed: Angus x Brahman F1 hybrid

30522
type: Taxonomy
SIO_000068: taxonomy

LOC113885181
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 83733..84673
location: region:83733-84673:1
so has part: feature:83733-84673:1:exon

113885181
type: Gene
SIO_000068: ncbigene

position:83733:1
position: 83733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84673:1
position: 84673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83733-84673:1:exon

LOC113885181
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885181
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC113885181
subclass of: SO_0000673
so part of: LOC113885181
location: 83733..84673
location: region:83733-84673:1
so has part: feature:83733-84673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83733-84673:1:exon

LOC113885182
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 85086..104886
location: region:85086-104886:1
so has part: feature:85086-104886:1:exon
subclass of: SO_0000010

113885182
type: Gene
SIO_000068: ncbigene

position:85086:1
position: 85086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104886:1
position: 104886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85086-104886:1:exon

LOC113885182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885182
product: olfactory receptor 5D14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins
transcript id: XM_027530318.1
SIO_010081: LOC113885182
subclass of: SO_0000673
so part of: LOC113885182
location: join(85086..85187,103936..104886)
location: region:85086-104886:1
so has part: feature:85086-85187:1:exon
so has part: feature:103936-104886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85086-85187:1:exon

position:85187:1
position: 85187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103936-104886:1:exon

position:103936:1
position: 103936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 5D14
translation: MEVLWVNSVPQISMSPRTQNVTLFENKIFADVIKGIIVMTARNLSLETTFALLGFTDYPELQIPLFLVFLIMYIITVVGNLGMMVIIKINPKFHNPMYFFLSHLSFVDFCYSSIVTPKLLENLVMADKSIFYTSCMLQYFLSCTAVVTESFLLAVMAYDRFVAICNPLLYTVVMSQRLCALLVSGSYLWGMFGPLVLLCYALQLSFSGHTVINHFFCEYTALIAVSSSNTHIPHLLLFTFATFNEVSTLLIILTSYVFIFVTVLNIRSASGRRKAFSTCASHLTAITIFHGTILSLYCVPNSKNSRQTVKVASVFYTVVNPMLNPLIYSLRNKDVKDAFQKLIDTKASFH
SIO_010081: LOC113885182
subclass of: SO_0000673
so part of: LOC113885182
location: join(85086..85187,103936..104886)
location: region:85086-104886:1
so has part: feature:85086-85187:1:exon
so has part: feature:103936-104886:1:exon

XP_027386119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85086-85187:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103936-104886:1:exon

LOC113885183
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 110125..112353
location: region:110125-112353:1
so has part: feature:110125-112353:1:exon

113885183
type: Gene
SIO_000068: ncbigene

position:110125:1
position: 110125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112353:1
position: 112353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110125-112353:1:exon

LOC113885183
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885183
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins
pseudo: true
SIO_010081: LOC113885183
subclass of: SO_0000673
so part of: LOC113885183
location: 110125..110637
location: region:110125-110637:1
so has part: feature:110125-110637:1:exon

position:110637:1
position: 110637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110125-110637:1:exon

LOC113885183
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885183
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins
pseudo: true
SIO_010081: LOC113885183
subclass of: SO_0000673
so part of: LOC113885183
location: 111898..112353
location: region:111898-112353:1
so has part: feature:111898-112353:1:exon

position:111898:1
position: 111898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111898-112353:1:exon

LOC113885184
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(120211..125681)
location: region:120211-125681:-1
so has part: feature:120211-125681:-1:exon

113885184
type: Gene
SIO_000068: ncbigene

position:120211:-1
position: 120211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125681:-1
position: 125681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120211-125681:-1:exon

LOC113885184
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885184
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113885184
subclass of: SO_0000673
so part of: LOC113885184
location: complement(120211..120972)
location: region:120211-120972:-1
so has part: feature:120211-120972:-1:exon

position:120972:-1
position: 120972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120211-120972:-1:exon

LOC113885184
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885184
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113885184
subclass of: SO_0000673
so part of: LOC113885184
location: complement(125669..125681)
location: region:125669-125681:-1
so has part: feature:125669-125681:-1:exon

position:125669:-1
position: 125669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125669-125681:-1:exon

LOC113885562
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 126779..127715
location: region:126779-127715:1
so has part: feature:126779-127715:1:exon
subclass of: SO_0000010

113885562
type: Gene
SIO_000068: ncbigene

position:126779:1
position: 126779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127715:1
position: 127715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126779-127715:1:exon

LOC113885562
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885562
product: olfactory receptor 5L2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins
transcript id: XM_027531026.1
SIO_010081: LOC113885562
subclass of: SO_0000673
so part of: LOC113885562
location: 126779..127715
location: region:126779-127715:1
so has part: feature:126779-127715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126779-127715:1:exon

LOC113885562
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885562
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: olfactory receptor 5L2-like
translation: MDEENCTAVTDFILLGFSDAPELRVFLFLLFLSIYGVTVWGNLGMIALIQVSSRLHTPMYFFLSHLSFVDFCYSMISTPKMIANILKEDKVISFLELTVQFYLFCTSVVTEVILLAVMAYDRFVAICDPLLYMVTMSRNLCMELVSCCYLNGTVCSVIHLCLDLQIPSYRSNVINHFFCDIPLLLSLACSDVTVNQFVLYTVATFSEIITSVIILISYLFFLITILRIHSAEERCKAFYTCASHLAAIAVLQGTILIIYCWPHSGNSMDIDRVATVFYTVVIPILNPLIYSLRNKDVKEALRKVVSSKIFS
SIO_010081: LOC113885562
subclass of: SO_0000673
so part of: LOC113885562
location: 126779..127715
location: region:126779-127715:1
so has part: feature:126779-127715:1:exon

XP_027386827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126779-127715:1:exon

LOC113885162
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 144454..145383
location: region:144454-145383:1
so has part: feature:144454-145383:1:exon

113885162
type: Gene
SIO_000068: ncbigene

position:144454:1
position: 144454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145383:1
position: 145383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144454-145383:1:exon

LOC113885162
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885162
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC113885162
subclass of: SO_0000673
so part of: LOC113885162
location: 144454..145383
location: region:144454-145383:1
so has part: feature:144454-145383:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144454-145383:1:exon

LOC113885185
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 168031..168961
location: region:168031-168961:1
so has part: feature:168031-168961:1:exon

113885185
type: Gene
SIO_000068: ncbigene

position:168031:1
position: 168031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168961:1
position: 168961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168031-168961:1:exon

LOC113885185
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885185
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC113885185
subclass of: SO_0000673
so part of: LOC113885185
location: 168031..168961
location: region:168031-168961:1
so has part: feature:168031-168961:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:168031-168961:1:exon

LOC113885186
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885186
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 188755..189666
location: region:188755-189666:1
so has part: feature:188755-189666:1:exon

113885186
type: Gene
SIO_000068: ncbigene

position:188755:1
position: 188755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189666:1
position: 189666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188755-189666:1:exon

LOC113885186
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885186
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC113885186
subclass of: SO_0000673
so part of: LOC113885186
location: 188755..189666
location: region:188755-189666:1
so has part: feature:188755-189666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188755-189666:1:exon

LOC113885187
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 221135..226883
location: region:221135-226883:1
so has part: feature:221135-226883:1:exon
subclass of: SO_0000010

113885187
type: Gene
SIO_000068: ncbigene

position:221135:1
position: 221135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226883:1
position: 226883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221135-226883:1:exon

LOC113885187
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885187
product: olfactory receptor 4P4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_027530319.1
SIO_010081: LOC113885187
subclass of: SO_0000673
so part of: LOC113885187
location: join(221135..221431,225893..226638,226721..226883)
location: region:221135-226883:1
so has part: feature:221135-221431:1:exon
so has part: feature:225893-226638:1:exon
so has part: feature:226721-226883:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221135-221431:1:exon

position:221431:1
position: 221431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:225893-226638:1:exon

position:225893:1
position: 225893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226638:1
position: 226638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:226721-226883:1:exon

position:226721:1
position: 226721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885187
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 4P4-like
translation: MGEVAEVMLLLLPSTRHLAIQGDTLCGSVGVSPPPPLSCPFPVAGGVSTDGTGEAVAGKRAAAAAATSGRVAVPPALPASPQTRLLNVAEINLNSKWLKTIKYTSNITEFIPLGLSQNMKIKHVCFLVFLFCYIAIWMGNLLIMISITCSQLNNQPMYFFLNYLALSDLCYTSTVTPKLVTDLLAESSTISYIDCMAQLSATHFFGGIEVCILTMTASDCFVAICRPLHCTVIMSRHRRCAMVSACCAGAFLHSFPKGLLTINLPFCGSDEIDHYFCDVYPLLKLVNKDTYGVGILVVANAGMMGLVIFVVVMLSYILILYTIKPYPTESWYKALSTCSSHITVVGFFFAPTFFIYIRPATTFPEEKVFALFYIIIPPMFNPLIYTLRNAEMKNALRKVWC
SIO_010081: LOC113885187
subclass of: SO_0000673
so part of: LOC113885187
location: join(221135..221431,225893..226638,226721..226883)
location: region:221135-226883:1
so has part: feature:221135-221431:1:exon
so has part: feature:225893-226638:1:exon
so has part: feature:226721-226883:1:exon

XP_027386120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221135-221431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225893-226638:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:226721-226883:1:exon

LOC113885188
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(229512..230322)
location: region:229512-230322:-1
so has part: feature:229512-230322:-1:exon

113885188
type: Gene
SIO_000068: ncbigene

position:229512:-1
position: 229512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230322:-1
position: 230322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229512-230322:-1:exon

LOC113885188
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885188
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC113885188
subclass of: SO_0000673
so part of: LOC113885188
location: complement(229512..230322)
location: region:229512-230322:-1
so has part: feature:229512-230322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229512-230322:-1:exon

LOC113885189
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(240212..241246)
location: region:240212-241246:-1
so has part: feature:240212-241246:-1:exon

113885189
type: Gene
SIO_000068: ncbigene

position:240212:-1
position: 240212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241246:-1
position: 241246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240212-241246:-1:exon

LOC113885189
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885189
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC113885189
subclass of: SO_0000673
so part of: LOC113885189
location: complement(240212..240376)
location: region:240212-240376:-1
so has part: feature:240212-240376:-1:exon

position:240376:-1
position: 240376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240212-240376:-1:exon

LOC113885189
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885189
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC113885189
subclass of: SO_0000673
so part of: LOC113885189
location: complement(240461..241246)
location: region:240461-241246:-1
so has part: feature:240461-241246:-1:exon

position:240461:-1
position: 240461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240461-241246:-1:exon

LOC113885190
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 261569..263140
location: region:261569-263140:1
so has part: feature:261569-263140:1:exon
subclass of: SO_0000010

113885190
type: Gene
SIO_000068: ncbigene

position:261569:1
position: 261569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263140:1
position: 263140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261569-263140:1:exon

LOC113885190
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885190
product: endogenous retrovirus group K member 7 Gag polyprotein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027530321.1
SIO_010081: LOC113885190
subclass of: SO_0000673
so part of: LOC113885190
location: 261569..263140
location: region:261569-263140:1
so has part: feature:261569-263140:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261569-263140:1:exon

LOC113885190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885190
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:262358..262360,aa:OTHER)
transl except: (pos:262664..262666,aa:OTHER)
product: LOW QUALITY PROTEIN: endogenous retrovirus group K member 7 Gag polyprotein-like
translation: MGQGNSCQLFVHMLKTMLKGRGINVNKLHLEKFLLFIEDVCPWFPEEGTVSLETWKKVGKQLQTYYSLHGPNRVPVDAFSLWTLIRDCLDPEHEGHKTQTALRDSTEPEVAEPSTPPPESLYAVSEGTACKAGGNDDVLSSDEQEELNEQAAQYHREDMPWEMMVNMQPPSGKGELKHSGLSEEQLENLIQKIVIAVKKDAQGDSHSSQPLPPGYPPSVLAGLNPPPPFIELQELISIPASLPGENIKIRSEILLSPLQQAIKXANEEGEYIPGFSGIYPVFENAQQQRYYEPLPFKQLKELKMACAQYGPTAPFTQAIIEALGNQNLPPNDWKQVARACLSGRDYLLWKSEFAEQCGITADISRXQGLNTTYEMMVGEGDYRDTNNQLNYLPGAYPQISAVALQAWKKLPNSDKKTEDLSKILQGPDEPYQDFVARLLEAISKMIGDEQAGMVLAKQLAYENANLACQAALRPYRKKGGLSDYVRICADIGPSYVQGITLAAALQGKTVKEVLYQQQKRDKG
SIO_010081: LOC113885190
subclass of: SO_0000673
so part of: LOC113885190
location: 261569..263140
location: region:261569-263140:1
so has part: feature:261569-263140:1:exon

XP_027386122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261569-263140:1:exon

LOC113885191
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 273291..277928
location: region:273291-277928:1
so has part: feature:273291-277928:1:exon

113885191
type: Gene
SIO_000068: ncbigene

position:273291:1
position: 273291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277928:1
position: 277928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273291-277928:1:exon

LOC113885191
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885191
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC113885191
subclass of: SO_0000673
so part of: LOC113885191
location: 273291..273358
location: region:273291-273358:1
so has part: feature:273291-273358:1:exon

position:273358:1
position: 273358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273291-273358:1:exon

LOC113885191
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885191
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC113885191
subclass of: SO_0000673
so part of: LOC113885191
location: 276978..277928
location: region:276978-277928:1
so has part: feature:276978-277928:1:exon

position:276978:1
position: 276978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276978-277928:1:exon

LOC113885192
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 286940..292021
location: region:286940-292021:1
so has part: feature:286940-292021:1:exon

113885192
type: Gene
SIO_000068: ncbigene

position:286940:1
position: 286940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292021:1
position: 292021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286940-292021:1:exon

LOC113885192
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885192
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC113885192
subclass of: SO_0000673
so part of: LOC113885192
location: 286940..286964
location: region:286940-286964:1
so has part: feature:286940-286964:1:exon

position:286964:1
position: 286964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286940-286964:1:exon

LOC113885192
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885192
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC113885192
subclass of: SO_0000673
so part of: LOC113885192
location: 291097..292021
location: region:291097-292021:1
so has part: feature:291097-292021:1:exon

position:291097:1
position: 291097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291097-292021:1:exon

LOC113885555
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885555
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 313116..314057
location: region:313116-314057:1
so has part: feature:313116-314057:1:exon
subclass of: SO_0000010

113885555
type: Gene
SIO_000068: ncbigene

position:313116:1
position: 313116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314057:1
position: 314057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313116-314057:1:exon

LOC113885555
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885555
product: olfactory receptor 5D18-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins
transcript id: XM_027531001.1
SIO_010081: LOC113885555
subclass of: SO_0000673
so part of: LOC113885555
location: 313116..314057
location: region:313116-314057:1
so has part: feature:313116-314057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313116-314057:1:exon

LOC113885555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885555
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 5D18-like
translation: MFLSERNKSGATSTVLGFSDYPELQVPLFLIFFTIYSVTVVGNLGMIVTIKINPKLHTPMYFFLSHPSFVDFCYSSIIARKTMVNLMVEDRTISFVVCVIQVFFFCTFVVTESFLLAVMAYDLFVAICNPLLYMVAMSPRLCAMLVVGSFAWGTTYSLAFTFSVSKLPFCGFNTINHFFCEFSSLLSVSCSDTYLNQLLLFIFATFNEVSTPFIILLSYVFIVVTIFKMHSACGRRKAFSTCASCLTAISILTSTIVFLYCVPNSTTSRHTVKVVSVFYTVVIPMLNPLIYSLRNKDVNKTVSKIVGSKLFSY
SIO_010081: LOC113885555
subclass of: SO_0000673
so part of: LOC113885555
location: 313116..314057
location: region:313116-314057:1
so has part: feature:313116-314057:1:exon

XP_027386802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313116-314057:1:exon

LOC113885193
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885193
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 325305..326255
location: region:325305-326255:1
so has part: feature:325305-326255:1:exon
subclass of: SO_0000010

113885193
type: Gene
SIO_000068: ncbigene

position:325305:1
position: 325305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326255:1
position: 326255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325305-326255:1:exon

LOC113885193
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885193
product: olfactory receptor 5L1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins
transcript id: XM_027530322.1
SIO_010081: LOC113885193
subclass of: SO_0000673
so part of: LOC113885193
location: 325305..326255
location: region:325305-326255:1
so has part: feature:325305-326255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:325305-326255:1:exon

LOC113885193
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885193
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 5L1-like
translation: MDEENCTAVSDFILLGFSDAPELRVFLFLLFLSIYGVTVLGNLGMIVLIQVSSGLPTPMYFFLSHLSFVDFCYSMFSTPKILANILNEDKAISFLECTVQFYLFCTFVVTEVILLAVMAYDHFVAICDSQLYMVTVSRDLYVELVSCCYLSGAMCSLIHLCLALQIPSYRLNMINHFFCDLPSLLSLACSDMIVNQLMLYIGATFYKIIIIPVILTPYLCILITILRMPSAEGRCNAFSTCASHLRAIAILQGTILFIYCQPHSGNIMGTDKVTTVFYTVVIPMPNPLIYSLRNKDVKETLRKVVSSKILSYRIFS
SIO_010081: LOC113885193
subclass of: SO_0000673
so part of: LOC113885193
location: 325305..326255
location: region:325305-326255:1
so has part: feature:325305-326255:1:exon

XP_027386123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325305-326255:1:exon

LOC113885293
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885293
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(352538..354658)
location: region:352538-354658:-1
so has part: feature:352538-354658:-1:exon

113885293
type: Gene
SIO_000068: ncbigene

position:352538:-1
position: 352538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354658:-1
position: 354658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352538-354658:-1:exon

LOC113885293
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885293
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC113885293
subclass of: SO_0000673
so part of: LOC113885293
location: complement(352538..353259)
location: region:352538-353259:-1
so has part: feature:352538-353259:-1:exon

position:353259:-1
position: 353259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352538-353259:-1:exon

LOC113885293
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885293
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC113885293
subclass of: SO_0000673
so part of: LOC113885293
location: complement(354439..354658)
location: region:354439-354658:-1
so has part: feature:354439-354658:-1:exon

position:354439:-1
position: 354439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354439-354658:-1:exon

LOC113885371
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885371
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(368770..369708)
location: region:368770-369708:-1
so has part: feature:368770-369708:-1:exon
subclass of: SO_0000010

113885371
type: Gene
SIO_000068: ncbigene

position:368770:-1
position: 368770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369708:-1
position: 369708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368770-369708:-1:exon

LOC113885371
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885371
product: olfactory receptor 5AS1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_027530679.1
SIO_010081: LOC113885371
subclass of: SO_0000673
so part of: LOC113885371
location: complement(368770..369708)
location: region:368770-369708:-1
so has part: feature:368770-369708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368770-369708:-1:exon

LOC113885371
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885371
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 5AS1
translation: MLENNCTMPIEFLLVGFTDYLPLRVTLFLVFLIVYTLTMVGNVGLIILININSSLQTPMYYFLSNLSFLDISYSTAIIPKMLVNFLASKKSISLSGCVLQMFFFGCFADAECLILAAMAYDRYAAICNPLLYSALVSRRVCVCCIVLAYFSGGVTSMVHVCLTFRLPFCGSNIVNHFFCDIPPLLALSCTDTYINELLLFALCGFIQTSTFVVIFISYFCILLTVLSIKSSGGRSKTFSTCASHLLAITLFYGTLLFMYLRPTTSYSPDTDKVVAVFYTVVFPMFNPIIYSFRNKDVKYALRKLLDRNGTFK
SIO_010081: LOC113885371
subclass of: SO_0000673
so part of: LOC113885371
location: complement(368770..369708)
location: region:368770-369708:-1
so has part: feature:368770-369708:-1:exon

XP_027386480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368770-369708:-1:exon

LOC113885303
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885303
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 398339..399250
location: region:398339-399250:1
so has part: feature:398339-399250:1:exon

113885303
type: Gene
SIO_000068: ncbigene

position:398339:1
position: 398339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399250:1
position: 399250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398339-399250:1:exon

LOC113885303
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885303
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC113885303
subclass of: SO_0000673
so part of: LOC113885303
location: 398339..399250
location: region:398339-399250:1
so has part: feature:398339-399250:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:398339-399250:1:exon

LOC113885159
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 409561..410506
location: region:409561-410506:1
so has part: feature:409561-410506:1:exon

113885159
type: Gene
SIO_000068: ncbigene

position:409561:1
position: 409561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410506:1
position: 410506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409561-410506:1:exon

LOC113885159
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885159
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC113885159
subclass of: SO_0000673
so part of: LOC113885159
location: 409561..410506
location: region:409561-410506:1
so has part: feature:409561-410506:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:409561-410506:1:exon

LOC113885194
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885194
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 429080..429992
location: region:429080-429992:1
so has part: feature:429080-429992:1:exon

113885194
type: Gene
SIO_000068: ncbigene

position:429080:1
position: 429080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429992:1
position: 429992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429080-429992:1:exon

LOC113885194
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC113885194
subclass of: SO_0000673
so part of: LOC113885194
location: 429080..429992
location: region:429080-429992:1
so has part: feature:429080-429992:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:429080-429992:1:exon

LOC113885195
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885195
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(444070..450345)
location: region:444070-450345:-1
so has part: feature:444070-450345:-1:exon

113885195
type: Gene
SIO_000068: ncbigene

position:444070:-1
position: 444070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450345:-1
position: 450345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444070-450345:-1:exon

LOC113885195
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885195
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 50% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113885195
subclass of: SO_0000673
so part of: LOC113885195
location: complement(444070..445572)
location: region:444070-445572:-1
so has part: feature:444070-445572:-1:exon

position:445572:-1
position: 445572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444070-445572:-1:exon

LOC113885195
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885195
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 50% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113885195
subclass of: SO_0000673
so part of: LOC113885195
location: complement(445629..445940)
location: region:445629-445940:-1
so has part: feature:445629-445940:-1:exon

position:445629:-1
position: 445629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445940:-1
position: 445940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445629-445940:-1:exon

LOC113885195
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885195
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 50% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113885195
subclass of: SO_0000673
so part of: LOC113885195
location: complement(449703..450345)
location: region:449703-450345:-1
so has part: feature:449703-450345:-1:exon

position:449703:-1
position: 449703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449703-450345:-1:exon

LOC113885196
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885196
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 452312..456002
location: region:452312-456002:1
so has part: feature:452312-456002:1:exon

113885196
type: Gene
SIO_000068: ncbigene

position:452312:1
position: 452312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456002:1
position: 456002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452312-456002:1:exon

LOC113885196
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC113885196
subclass of: SO_0000673
so part of: LOC113885196
location: 452312..452374
location: region:452312-452374:1
so has part: feature:452312-452374:1:exon

position:452374:1
position: 452374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452312-452374:1:exon

LOC113885196
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC113885196
subclass of: SO_0000673
so part of: LOC113885196
location: 453844..453943
location: region:453844-453943:1
so has part: feature:453844-453943:1:exon

position:453844:1
position: 453844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453943:1
position: 453943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453844-453943:1:exon

LOC113885196
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC113885196
subclass of: SO_0000673
so part of: LOC113885196
location: 454069..454070
location: region:454069-454070:1
so has part: feature:454069-454070:1:exon

position:454069:1
position: 454069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454070:1
position: 454070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454069-454070:1:exon

LOC113885196
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC113885196
subclass of: SO_0000673
so part of: LOC113885196
location: 454759..455283
location: region:454759-455283:1
so has part: feature:454759-455283:1:exon

position:454759:1
position: 454759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455283:1
position: 455283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454759-455283:1:exon

LOC113885196
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC113885196
subclass of: SO_0000673
so part of: LOC113885196
location: 455843..456002
location: region:455843-456002:1
so has part: feature:455843-456002:1:exon

position:455843:1
position: 455843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455843-456002:1:exon

LOC113885158
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885158
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 461433..462364
location: region:461433-462364:1
so has part: feature:461433-462364:1:exon

113885158
type: Gene
SIO_000068: ncbigene

position:461433:1
position: 461433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462364:1
position: 462364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461433-462364:1:exon

LOC113885158
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885158
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
pseudo: true
SIO_010081: LOC113885158
subclass of: SO_0000673
so part of: LOC113885158
location: 461433..462364
location: region:461433-462364:1
so has part: feature:461433-462364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461433-462364:1:exon

LOC113885475
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885475
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 492424..496929
location: region:492424-496929:1
so has part: feature:492424-496929:1:exon
subclass of: SO_0000011

113885475
type: Gene
SIO_000068: ncbigene

position:492424:1
position: 492424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496929:1
position: 496929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492424-496929:1:exon

LOC113885475
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113885475
product: uncharacterized LOC113885475
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003509225.1
SIO_010081: LOC113885475
subclass of: SO_0000673
so part of: LOC113885475
location: join(492424..492524,496411..496517,496857..496929)
location: region:492424-496929:1
so has part: feature:492424-492524:1:exon
so has part: feature:496411-496517:1:exon
so has part: feature:496857-496929:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492424-492524:1:exon

position:492524:1
position: 492524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:496411-496517:1:exon

position:496411:1
position: 496411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496517:1
position: 496517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:496857-496929:1:exon

position:496857:1
position: 496857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RHOU
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: RHOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 683048..692646
location: region:683048-692646:1
so has part: feature:683048-692646:1:exon
subclass of: SO_0000010

113885326
type: Gene
SIO_000068: ncbigene

position:683048:1
position: 683048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692646:1
position: 692646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683048-692646:1:exon

RHOU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: RHOU
product: ras homolog family member U
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 85 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 209 samples with support for all annotated introns
transcript id: XM_027530590.1
SIO_010081: RHOU
subclass of: SO_0000673
so part of: RHOU
location: join(683048..683499,685032..685090,690359..692646)
location: region:683048-692646:1
so has part: feature:683048-683499:1:exon
so has part: feature:685032-685090:1:exon
so has part: feature:690359-692646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683048-683499:1:exon

position:683499:1
position: 683499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:685032-685090:1:exon

position:685032:1
position: 685032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685090:1
position: 685090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:690359-692646:1:exon

position:690359:1
position: 690359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RHOU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: RHOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoU
translation: MPPQQGDPAFPGRCEAPPVPPRRERGVRGPGAPGGRGRAGGPEGHGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVKLQLCDTAGQDEFDKLRPLCYTNADIFLLCFSVVGPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAARLCAEEIKATSYIECSALTQKNLKEVFDAAIVAGIQYSDSQQQPKKSKSRTPDKMKTLSKSWWKKYCCFV
SIO_010081: RHOU
subclass of: SO_0000673
so part of: RHOU
location: join(683247..683499,685032..685090,690359..690814)
location: region:683247-690814:1
so has part: feature:683247-683499:1:exon
so has part: feature:685032-685090:1:exon
so has part: feature:690359-690814:1:exon

XP_027386391.1
type: Protein
SIO_000068: ncbiprotein

position:683247:1
position: 683247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690814:1
position: 690814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683247-683499:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685032-685090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:690359-690814:1:exon

RAB4A
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: RAB4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1184032..1257211
location: region:1184032-1257211:1
so has part: feature:1184032-1257211:1:exon
subclass of: SO_0000010

113885249
type: Gene
SIO_000068: ncbigene

position:1184032:1
position: 1184032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257211:1
position: 1257211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184032-1257211:1:exon

RAB4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: RAB4A
product: RAB4A, member RAS oncogene family, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_027530394.1
SIO_010081: RAB4A
subclass of: SO_0000673
so part of: RAB4A
location: join(1184032..1184291,1208814..1208894,1210896..1211010,1215737..1215799,1216862..1217016,1218267..1218362,1221732..1221865,1255982..1257211)
location: region:1184032-1257211:1
so has part: feature:1184032-1184291:1:exon
so has part: feature:1208814-1208894:1:exon
so has part: feature:1210896-1211010:1:exon
so has part: feature:1215737-1215799:1:exon
so has part: feature:1216862-1217016:1:exon
so has part: feature:1218267-1218362:1:exon
so has part: feature:1221732-1221865:1:exon
so has part: feature:1255982-1257211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1184032-1184291:1:exon

position:1184291:1
position: 1184291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1208814-1208894:1:exon

position:1208814:1
position: 1208814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1208894:1
position: 1208894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1210896-1211010:1:exon

position:1210896:1
position: 1210896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1211010:1
position: 1211010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1215737-1215799:1:exon

position:1215737:1
position: 1215737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215799:1
position: 1215799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1216862-1217016:1:exon

position:1216862:1
position: 1216862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217016:1
position: 1217016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1218267-1218362:1:exon

position:1218267:1
position: 1218267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218362:1
position: 1218362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1221732-1221865:1:exon

position:1221732:1
position: 1221732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221865:1
position: 1221865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1255982-1257211:1:exon

position:1255982:1
position: 1255982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: RAB4A
product: RAB4A, member RAS oncogene family, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 3 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_027530395.1
SIO_010081: RAB4A
subclass of: SO_0000673
so part of: RAB4A
location: join(1184032..1184291,1208814..1208894,1210896..1211010,1215737..1215799,1216862..1217016,1218267..1218362,1221732..1221865,1230230..1235259)
location: region:1184032-1235259:1
so has part: feature:1184032-1184291:1:exon
so has part: feature:1208814-1208894:1:exon
so has part: feature:1210896-1211010:1:exon
so has part: feature:1215737-1215799:1:exon
so has part: feature:1216862-1217016:1:exon
so has part: feature:1218267-1218362:1:exon
so has part: feature:1221732-1221865:1:exon
so has part: feature:1230230-1235259:1:exon

position:1235259:1
position: 1235259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184032-1184291:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208814-1208894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210896-1211010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215737-1215799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1216862-1217016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218267-1218362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1221732-1221865:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230230-1235259:1:exon

position:1230230:1
position: 1230230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: RAB4A
product: RAB4A, member RAS oncogene family, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 48 ESTs, 9 long SRA reads, 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 197 samples with support for all annotated introns
transcript id: XM_027530393.1
SIO_010081: RAB4A
subclass of: SO_0000673
so part of: RAB4A
location: join(1184048..1184291,1208814..1208894,1210896..1211010,1215737..1215799,1216862..1217016,1218267..1218362,1221732..1221865,1226537..1235259)
location: region:1184048-1235259:1
so has part: feature:1184048-1184291:1:exon
so has part: feature:1208814-1208894:1:exon
so has part: feature:1210896-1211010:1:exon
so has part: feature:1215737-1215799:1:exon
so has part: feature:1216862-1217016:1:exon
so has part: feature:1218267-1218362:1:exon
so has part: feature:1221732-1221865:1:exon
so has part: feature:1226537-1235259:1:exon

position:1184048:1
position: 1184048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184048-1184291:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208814-1208894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210896-1211010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215737-1215799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1216862-1217016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218267-1218362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1221732-1221865:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1226537-1235259:1:exon

position:1226537:1
position: 1226537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: RAB4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-4A
translation: MSQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQYGDAALRQLRSPRRAQAPSAQECGC
SIO_010081: RAB4A
subclass of: SO_0000673
so part of: RAB4A
location: join(1184261..1184291,1208814..1208894,1210896..1211010,1215737..1215799,1216862..1217016,1218267..1218362,1221732..1221847)
location: region:1184261-1221847:1
so has part: feature:1184261-1184291:1:exon
so has part: feature:1208814-1208894:1:exon
so has part: feature:1210896-1211010:1:exon
so has part: feature:1215737-1215799:1:exon
so has part: feature:1216862-1217016:1:exon
so has part: feature:1218267-1218362:1:exon
so has part: feature:1221732-1221847:1:exon

XP_027386194.1
type: Protein
SIO_000068: ncbiprotein

position:1184261:1
position: 1184261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221847:1
position: 1221847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184261-1184291:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208814-1208894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210896-1211010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215737-1215799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1216862-1217016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218267-1218362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1221732-1221847:1:exon

RAB4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: RAB4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-4A
translation: MSQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQYGDAALRQLRSPRRAQAPSAQECGC
SIO_010081: RAB4A
subclass of: SO_0000673
so part of: RAB4A
location: join(1184261..1184291,1208814..1208894,1210896..1211010,1215737..1215799,1216862..1217016,1218267..1218362,1221732..1221847)
location: region:1184261-1221847:1
so has part: feature:1184261-1184291:1:exon
so has part: feature:1208814-1208894:1:exon
so has part: feature:1210896-1211010:1:exon
so has part: feature:1215737-1215799:1:exon
so has part: feature:1216862-1217016:1:exon
so has part: feature:1218267-1218362:1:exon
so has part: feature:1221732-1221847:1:exon

XP_027386195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1184261-1184291:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208814-1208894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210896-1211010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215737-1215799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1216862-1217016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218267-1218362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1221732-1221847:1:exon

RAB4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: RAB4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-4A
translation: MSQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQYGDAALRQLRSPRRAQAPSAQECGC
SIO_010081: RAB4A
subclass of: SO_0000673
so part of: RAB4A
location: join(1184261..1184291,1208814..1208894,1210896..1211010,1215737..1215799,1216862..1217016,1218267..1218362,1221732..1221847)
location: region:1184261-1221847:1
so has part: feature:1184261-1184291:1:exon
so has part: feature:1208814-1208894:1:exon
so has part: feature:1210896-1211010:1:exon
so has part: feature:1215737-1215799:1:exon
so has part: feature:1216862-1217016:1:exon
so has part: feature:1218267-1218362:1:exon
so has part: feature:1221732-1221847:1:exon

XP_027386196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1184261-1184291:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208814-1208894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210896-1211010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215737-1215799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1216862-1217016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218267-1218362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1221732-1221847:1:exon

SPHAR
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: SPHAR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1226847..1228247
location: region:1226847-1228247:1
so has part: feature:1226847-1228247:1:exon
subclass of: SO_0000010

113885197
type: Gene
SIO_000068: ncbigene

position:1226847:1
position: 1226847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228247:1
position: 1228247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1226847-1228247:1:exon

SPHAR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SPHAR
product: S-phase response (cyclin related)
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027530324.1
SIO_010081: SPHAR
subclass of: SO_0000673
so part of: SPHAR
location: join(1226847..1226863,1227814..1228247)
location: region:1226847-1228247:1
so has part: feature:1226847-1226863:1:exon
so has part: feature:1227814-1228247:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1226847-1226863:1:exon

position:1226863:1
position: 1226863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1227814-1228247:1:exon

position:1227814:1
position: 1227814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPHAR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SPHAR
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1227904..1227906,aa:OTHER)
transl except: (pos:1227985..1227987,aa:OTHER)
product: LOW QUALITY PROTEIN: protein SPHAR
translation: MVSDVHTEALQTLEVTWIKISRCNCFRYFXFCFFISXIFDFEKSEYEANSQTDLLLGPHWKNVXFSVLLTVGLQAAHF
SIO_010081: SPHAR
subclass of: SO_0000673
so part of: SPHAR
location: join(1226847..1226863,1227814..1228032)
location: region:1226847-1228032:1
so has part: feature:1226847-1226863:1:exon
so has part: feature:1227814-1228032:1:exon

XP_027386125.1
type: Protein
SIO_000068: ncbiprotein

position:1228032:1
position: 1228032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1226847-1226863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1227814-1228032:1:exon

CCSAP
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: CCSAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1248173..1267973)
location: region:1248173-1267973:-1
so has part: feature:1248173-1267973:-1:exon
subclass of: SO_0000010

113885248
type: Gene
SIO_000068: ncbigene

position:1248173:-1
position: 1248173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267973:-1
position: 1267973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248173-1267973:-1:exon

CCSAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CCSAP
product: centriole, cilia and spindle associated protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_027530389.1
SIO_010081: CCSAP
subclass of: SO_0000673
so part of: CCSAP
location: complement(join(1248173..1252073,1254178..1254443,1267048..1267458,1267893..1267973))
location: region:1248173-1267973:-1
so has part: feature:1267893-1267973:-1:exon
so has part: feature:1267048-1267458:-1:exon
so has part: feature:1254178-1254443:-1:exon
so has part: feature:1248173-1252073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1267893-1267973:-1:exon

position:1267893:-1
position: 1267893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1267048-1267458:-1:exon

position:1267048:-1
position: 1267048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267458:-1
position: 1267458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1254178-1254443:-1:exon

position:1254178:-1
position: 1254178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254443:-1
position: 1254443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1248173-1252073:-1:exon

position:1252073:-1
position: 1252073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCSAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CCSAP
product: centriole, cilia and spindle associated protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_027530392.1
SIO_010081: CCSAP
subclass of: SO_0000673
so part of: CCSAP
location: complement(join(1248173..1252073,1254178..1254443,1267048..1267458,1267880..1267962))
location: region:1248173-1267962:-1
so has part: feature:1267880-1267962:-1:exon
so has part: feature:1267048-1267458:-1:exon
so has part: feature:1254178-1254443:-1:exon
so has part: feature:1248173-1252073:-1:exon

position:1267962:-1
position: 1267962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267880-1267962:-1:exon

position:1267880:-1
position: 1267880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1267048-1267458:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1254178-1254443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1248173-1252073:-1:exon

CCSAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CCSAP
product: centriole, cilia and spindle associated protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 ESTs, 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 165 samples with support for all annotated introns
transcript id: XM_027530388.1
SIO_010081: CCSAP
subclass of: SO_0000673
so part of: CCSAP
location: complement(join(1248173..1252073,1254178..1254443,1267048..1267606))
location: region:1248173-1267606:-1
so has part: feature:1267048-1267606:-1:exon
so has part: feature:1254178-1254443:-1:exon
so has part: feature:1248173-1252073:-1:exon

position:1267606:-1
position: 1267606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267048-1267606:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254178-1254443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1248173-1252073:-1:exon

CCSAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CCSAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriole, cilia and spindle-associated protein isoform X1
translation: MGPVGDRAARKGGHSGPTCGTMSPGSGVKSEYMKRYQEPRWDEYGPCYRALRHYRLGRRLLEQAHAPWLWDDWGQAGASDDSASSASSGTGAPAPQCAPASPPPPPPAEPEGRVGPEEREVEAAGDAETRDAVDAEDAALPALPVKDVKEKPERQIRMRDPEKSASSTDPQQPPSALAARGSRKTKSPQRSSTRIKEHRHPFALYGWGEKQTDTGSQKTHNVCASAPMHEIHESALRAKSRRQVEKRRLAAQRQRAHSADVEKNRRVKPASSENPWMTEYMRCYSARA
SIO_010081: CCSAP
subclass of: SO_0000673
so part of: CCSAP
location: complement(join(1251897..1252073,1254178..1254443,1267048..1267471))
location: region:1251897-1267471:-1
so has part: feature:1267048-1267471:-1:exon
so has part: feature:1254178-1254443:-1:exon
so has part: feature:1251897-1252073:-1:exon

XP_027386189.1
type: Protein
SIO_000068: ncbiprotein

position:1251897:-1
position: 1251897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267471:-1
position: 1267471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267048-1267471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254178-1254443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1251897-1252073:-1:exon

CCSAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CCSAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriole, cilia and spindle-associated protein isoform X2
translation: MSPGSGVKSEYMKRYQEPRWDEYGPCYRALRHYRLGRRLLEQAHAPWLWDDWGQAGASDDSASSASSGTGAPAPQCAPASPPPPPPAEPEGRVGPEEREVEAAGDAETRDAVDAEDAALPALPVKDVKEKPERQIRMRDPEKSASSTDPQQPPSALAARGSRKTKSPQRSSTRIKEHRHPFALYGWGEKQTDTGSQKTHNVCASAPMHEIHESALRAKSRRQVEKRRLAAQRQRAHSADVEKNRRVKPASSENPWMTEYMRCYSARA
SIO_010081: CCSAP
subclass of: SO_0000673
so part of: CCSAP
location: complement(join(1251897..1252073,1254178..1254443,1267048..1267408))
location: region:1251897-1267408:-1
so has part: feature:1267048-1267408:-1:exon
so has part: feature:1254178-1254443:-1:exon
so has part: feature:1251897-1252073:-1:exon

XP_027386190.1
type: Protein
SIO_000068: ncbiprotein

position:1267408:-1
position: 1267408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267048-1267408:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254178-1254443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1251897-1252073:-1:exon

CCSAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CCSAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriole, cilia and spindle-associated protein isoform X2
translation: MSPGSGVKSEYMKRYQEPRWDEYGPCYRALRHYRLGRRLLEQAHAPWLWDDWGQAGASDDSASSASSGTGAPAPQCAPASPPPPPPAEPEGRVGPEEREVEAAGDAETRDAVDAEDAALPALPVKDVKEKPERQIRMRDPEKSASSTDPQQPPSALAARGSRKTKSPQRSSTRIKEHRHPFALYGWGEKQTDTGSQKTHNVCASAPMHEIHESALRAKSRRQVEKRRLAAQRQRAHSADVEKNRRVKPASSENPWMTEYMRCYSARA
SIO_010081: CCSAP
subclass of: SO_0000673
so part of: CCSAP
location: complement(join(1251897..1252073,1254178..1254443,1267048..1267408))
location: region:1251897-1267408:-1
so has part: feature:1267048-1267408:-1:exon
so has part: feature:1254178-1254443:-1:exon
so has part: feature:1251897-1252073:-1:exon

XP_027386193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1267048-1267408:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254178-1254443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1251897-1252073:-1:exon

CCSAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CCSAP
product: centriole, cilia and spindle associated protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_027530390.1
SIO_010081: CCSAP
subclass of: SO_0000673
so part of: CCSAP
location: complement(join(1252036..1252163,1254178..1254443,1267048..1267616))
location: region:1252036-1267616:-1
so has part: feature:1267048-1267616:-1:exon
so has part: feature:1254178-1254443:-1:exon
so has part: feature:1252036-1252163:-1:exon

position:1252036:-1
position: 1252036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267616:-1
position: 1267616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267048-1267616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254178-1254443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1252036-1252163:-1:exon

position:1252163:-1
position: 1252163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCSAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CCSAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centriole, cilia and spindle-associated protein isoform X3
translation: MGPVGDRAARKGGHSGPTCGTMSPGSGVKSEYMKRYQEPRWDEYGPCYRALRHYRLGRRLLEQAHAPWLWDDWGQAGASDDSASSASSGTGAPAPQCAPASPPPPPPAEPEGRVGPEEREVEAAGDAETRDAVDAEDAALPALPVKDVKEKPERQIRMRDPEKSASSTDPQQPPSALAARGSRKTKSPQRSSTRIKEHRHPFALYGWGEKQTDTGSQKTHNVCASAPMHEVTWRKLHCEYSGKLVPKPLE
SIO_010081: CCSAP
subclass of: SO_0000673
so part of: CCSAP
location: complement(join(1252101..1252163,1254178..1254443,1267048..1267471))
location: region:1252101-1267471:-1
so has part: feature:1267048-1267471:-1:exon
so has part: feature:1254178-1254443:-1:exon
so has part: feature:1252101-1252163:-1:exon

XP_027386191.1
type: Protein
SIO_000068: ncbiprotein

position:1252101:-1
position: 1252101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267048-1267471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254178-1254443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1252101-1252163:-1:exon

LOC113885198
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1339264..1340179
location: region:1339264-1340179:1
so has part: feature:1339264-1340179:1:exon

113885198
type: Gene
SIO_000068: ncbigene

position:1339264:1
position: 1339264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340179:1
position: 1340179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339264-1340179:1:exon

LOC113885198
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885198
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113885198
subclass of: SO_0000673
so part of: LOC113885198
location: 1339264..1340179
location: region:1339264-1340179:1
so has part: feature:1339264-1340179:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1339264-1340179:1:exon

ACTA1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: ACTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1389897..1392758)
location: region:1389897-1392758:-1
so has part: feature:1389897-1392758:-1:exon
subclass of: SO_0000010

113885382
type: Gene
SIO_000068: ncbigene

position:1389897:-1
position: 1389897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392758:-1
position: 1392758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389897-1392758:-1:exon

ACTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ACTA1
product: actin, alpha 1, skeletal muscle
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 948 ESTs, 13 long SRA reads, 104 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_027530700.1
SIO_010081: ACTA1
subclass of: SO_0000673
so part of: ACTA1
location: complement(join(1389897..1390289,1390376..1390557,1390653..1390844,1390946..1391107,1391211..1391535,1391641..1391781,1392566..1392758))
location: region:1389897-1392758:-1
so has part: feature:1392566-1392758:-1:exon
so has part: feature:1391641-1391781:-1:exon
so has part: feature:1391211-1391535:-1:exon
so has part: feature:1390946-1391107:-1:exon
so has part: feature:1390653-1390844:-1:exon
so has part: feature:1390376-1390557:-1:exon
so has part: feature:1389897-1390289:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1392566-1392758:-1:exon

position:1392566:-1
position: 1392566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1391641-1391781:-1:exon

position:1391641:-1
position: 1391641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1391781:-1
position: 1391781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1391211-1391535:-1:exon

position:1391211:-1
position: 1391211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1391535:-1
position: 1391535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1390946-1391107:-1:exon

position:1390946:-1
position: 1390946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1391107:-1
position: 1391107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1390653-1390844:-1:exon

position:1390653:-1
position: 1390653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1390844:-1
position: 1390844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1390376-1390557:-1:exon

position:1390376:-1
position: 1390376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1390557:-1
position: 1390557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1389897-1390289:-1:exon

position:1390289:-1
position: 1390289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ACTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin, alpha skeletal muscle
translation: MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF
SIO_010081: ACTA1
subclass of: SO_0000673
so part of: ACTA1
location: complement(join(1390146..1390289,1390376..1390557,1390653..1390844,1390946..1391107,1391211..1391535,1391641..1391769))
location: region:1390146-1391769:-1
so has part: feature:1391641-1391769:-1:exon
so has part: feature:1391211-1391535:-1:exon
so has part: feature:1390946-1391107:-1:exon
so has part: feature:1390653-1390844:-1:exon
so has part: feature:1390376-1390557:-1:exon
so has part: feature:1390146-1390289:-1:exon

XP_027386501.1
type: Protein
SIO_000068: ncbiprotein

position:1390146:-1
position: 1390146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1391769:-1
position: 1391769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391641-1391769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1391211-1391535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1390946-1391107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1390653-1390844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1390376-1390557:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1390146-1390289:-1:exon

NUP133
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: NUP133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1399589..1456281)
location: region:1399589-1456281:-1
so has part: feature:1399589-1456281:-1:exon
subclass of: SO_0000010

113885291
type: Gene
SIO_000068: ncbigene

position:1399589:-1
position: 1399589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1456281:-1
position: 1456281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1399589-1456281:-1:exon

NUP133
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: NUP133
product: nucleoporin 133
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 50 ESTs, 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 180 samples with support for all annotated introns
transcript id: XM_027530497.1
SIO_010081: NUP133
subclass of: SO_0000673
so part of: NUP133
location: complement(join(1399589..1400335,1407672..1407760,1409431..1409495,1411291..1411371,1412788..1412906,1415852..1415987,1416605..1416763,1419019..1419152,1419800..1420051,1420922..1421021,1421633..1421755,1426176..1426400,1428711..1428805,1430177..1430340,1434512..1434603,1436193..1436350,1437089..1437236,1439185..1439332,1442527..1442597,1442909..1443064,1444696..1444866,1445742..1445876,1447937..1448044,1449176..1449279,1453864..1453982,1455987..1456281))
location: region:1399589-1456281:-1
so has part: feature:1455987-1456281:-1:exon
so has part: feature:1453864-1453982:-1:exon
so has part: feature:1449176-1449279:-1:exon
so has part: feature:1447937-1448044:-1:exon
so has part: feature:1445742-1445876:-1:exon
so has part: feature:1444696-1444866:-1:exon
so has part: feature:1442909-1443064:-1:exon
so has part: feature:1442527-1442597:-1:exon
so has part: feature:1439185-1439332:-1:exon
so has part: feature:1437089-1437236:-1:exon
so has part: feature:1436193-1436350:-1:exon
so has part: feature:1434512-1434603:-1:exon
so has part: feature:1430177-1430340:-1:exon
so has part: feature:1428711-1428805:-1:exon
so has part: feature:1426176-1426400:-1:exon
so has part: feature:1421633-1421755:-1:exon
so has part: feature:1420922-1421021:-1:exon
so has part: feature:1419800-1420051:-1:exon
so has part: feature:1419019-1419152:-1:exon
so has part: feature:1416605-1416763:-1:exon
so has part: feature:1415852-1415987:-1:exon
so has part: feature:1412788-1412906:-1:exon
so has part: feature:1411291-1411371:-1:exon
so has part: feature:1409431-1409495:-1:exon
so has part: feature:1407672-1407760:-1:exon
so has part: feature:1399589-1400335:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1455987-1456281:-1:exon

position:1455987:-1
position: 1455987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1453864-1453982:-1:exon

position:1453864:-1
position: 1453864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1453982:-1
position: 1453982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1449176-1449279:-1:exon

position:1449176:-1
position: 1449176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449279:-1
position: 1449279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1447937-1448044:-1:exon

position:1447937:-1
position: 1447937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1448044:-1
position: 1448044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1445742-1445876:-1:exon

position:1445742:-1
position: 1445742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445876:-1
position: 1445876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1444696-1444866:-1:exon

position:1444696:-1
position: 1444696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444866:-1
position: 1444866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1442909-1443064:-1:exon

position:1442909:-1
position: 1442909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1443064:-1
position: 1443064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1442527-1442597:-1:exon

position:1442527:-1
position: 1442527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442597:-1
position: 1442597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1439185-1439332:-1:exon

position:1439185:-1
position: 1439185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439332:-1
position: 1439332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1437089-1437236:-1:exon

position:1437089:-1
position: 1437089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437236:-1
position: 1437236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1436193-1436350:-1:exon

position:1436193:-1
position: 1436193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1436350:-1
position: 1436350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1434512-1434603:-1:exon

position:1434512:-1
position: 1434512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1434603:-1
position: 1434603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1430177-1430340:-1:exon

position:1430177:-1
position: 1430177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430340:-1
position: 1430340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1428711-1428805:-1:exon

position:1428711:-1
position: 1428711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428805:-1
position: 1428805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1426176-1426400:-1:exon

position:1426176:-1
position: 1426176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426400:-1
position: 1426400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1421633-1421755:-1:exon

position:1421633:-1
position: 1421633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421755:-1
position: 1421755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1420922-1421021:-1:exon

position:1420922:-1
position: 1420922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421021:-1
position: 1421021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1419800-1420051:-1:exon

position:1419800:-1
position: 1419800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420051:-1
position: 1420051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1419019-1419152:-1:exon

position:1419019:-1
position: 1419019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419152:-1
position: 1419152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1416605-1416763:-1:exon

position:1416605:-1
position: 1416605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416763:-1
position: 1416763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1415852-1415987:-1:exon

position:1415852:-1
position: 1415852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415987:-1
position: 1415987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1412788-1412906:-1:exon

position:1412788:-1
position: 1412788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1412906:-1
position: 1412906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1411291-1411371:-1:exon

position:1411291:-1
position: 1411291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1411371:-1
position: 1411371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1409431-1409495:-1:exon

position:1409431:-1
position: 1409431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409495:-1
position: 1409495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1407672-1407760:-1:exon

position:1407672:-1
position: 1407672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1407760:-1
position: 1407760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1399589-1400335:-1:exon

position:1400335:-1
position: 1400335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NUP133
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: NUP133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup133
translation: MFPAVSSPRTPGTGTRRGPLGGVGPGSTPRATSRKGLTLGSSLSSPVLFSPAGRRSSLSSRGTPTRIFPHHSITESVNYDVKTFGSSLPVKVIEALTLTEVDDQLTVHIDEGGWACLVCKEKLIIWKIALSPITKLSVCKELQLPPSDFHWSADLVALSYSATSGEAHSTQAVTVMVATREGSIRYWPSLASEDTYTETFIDLGGDKTYSFLTAVQGGSFILSSSGGQLIRLIPESIGKIHQHILPQGQGVLSGIGRKVSSLLGILSPSSDLILSSVLWDRERASFYSLTSSNISKWELDDSSEKQAHSWDINRVLKENIIDAIWGSESNYEAIKEGVNIRYLDLKQNCDGLLILAAAWHLADSPCLVYYSLITVEDNGYQMSDAVTVEVTQYNPPFQSEDLTICRLMVPNFSNQTACLYTENAVYMCSTGTGKFSLPQEKIVFNTQGDSILGAGSCGGIPILFSRNSGLVSITSRENVSILAEDLEDSLASSVAGPGNESVVFDTSTKNETIAQEDKTKLLKAAFLQFCRKDLGHAQMIVDELFCSHSDLDSDCELDKAVTQISVDLLDDYPASDPRWAESVPEEAPGFSNTSLIILHQLEDKMKAHSFLMDFIHQVGLFRRLSTFPVRGMPMATRLLLCEHAEKLAAAIILKNHHSRLPDLMNTVILMALNKRDCDVPSNLTPADVFFREASQVDTICECLLEHEEQVLKDMSMESVEWAEVVINVNSILKDMLQAASHYRQNRNSLYRREESGEKEPEYIPWTATSGPAGIRTAIMRQHRTVLKMVYPQADSNLRNVLTEQLVALIDGFLDGYVSQLKSVDKSSDQERYSSLEMEYLQKRSDLLSPLLTLGQYPWAASLAEKYCDFDILVQMCEQTDNQTRLQRYMTQFADQNFSDFLFRWYLEKGKRGKLLSQPISQHGQLANFLQAHEHLSWLHEINSQELEKAHATLLGLANRETRYFAKKKTLLGLSKLAALASDFSEDTLQEKIEEMAEQERFLLHQETLPEQLLAEKRLSLSAMPVLTASQLIGLYICEENRRANEYDFKKALDLLEYIDEEEDVNINDLKLEILCKALQRDNWSSSDGKDDPIEVSKDSIFVKILQKLLKDGIQLSEYLPEVKELLQADQLGSLKSNPYFEFVLKANYEYYVQGQM
SIO_010081: NUP133
subclass of: SO_0000673
so part of: NUP133
location: complement(join(1400199..1400335,1407672..1407760,1409431..1409495,1411291..1411371,1412788..1412906,1415852..1415987,1416605..1416763,1419019..1419152,1419800..1420051,1420922..1421021,1421633..1421755,1426176..1426400,1428711..1428805,1430177..1430340,1434512..1434603,1436193..1436350,1437089..1437236,1439185..1439332,1442527..1442597,1442909..1443064,1444696..1444866,1445742..1445876,1447937..1448044,1449176..1449279,1453864..1453982,1455987..1456168))
location: region:1400199-1456168:-1
so has part: feature:1455987-1456168:-1:exon
so has part: feature:1453864-1453982:-1:exon
so has part: feature:1449176-1449279:-1:exon
so has part: feature:1447937-1448044:-1:exon
so has part: feature:1445742-1445876:-1:exon
so has part: feature:1444696-1444866:-1:exon
so has part: feature:1442909-1443064:-1:exon
so has part: feature:1442527-1442597:-1:exon
so has part: feature:1439185-1439332:-1:exon
so has part: feature:1437089-1437236:-1:exon
so has part: feature:1436193-1436350:-1:exon
so has part: feature:1434512-1434603:-1:exon
so has part: feature:1430177-1430340:-1:exon
so has part: feature:1428711-1428805:-1:exon
so has part: feature:1426176-1426400:-1:exon
so has part: feature:1421633-1421755:-1:exon
so has part: feature:1420922-1421021:-1:exon
so has part: feature:1419800-1420051:-1:exon
so has part: feature:1419019-1419152:-1:exon
so has part: feature:1416605-1416763:-1:exon
so has part: feature:1415852-1415987:-1:exon
so has part: feature:1412788-1412906:-1:exon
so has part: feature:1411291-1411371:-1:exon
so has part: feature:1409431-1409495:-1:exon
so has part: feature:1407672-1407760:-1:exon
so has part: feature:1400199-1400335:-1:exon

XP_027386298.1
type: Protein
SIO_000068: ncbiprotein

position:1400199:-1
position: 1400199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1456168:-1
position: 1456168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1455987-1456168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1453864-1453982:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1449176-1449279:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1447937-1448044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1445742-1445876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1444696-1444866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1442909-1443064:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1442527-1442597:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1439185-1439332:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1437089-1437236:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1436193-1436350:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1434512-1434603:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1430177-1430340:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1428711-1428805:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1426176-1426400:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1421633-1421755:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1420922-1421021:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1419800-1420051:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1419019-1419152:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1416605-1416763:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1415852-1415987:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1412788-1412906:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1411291-1411371:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1409431-1409495:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1407672-1407760:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1400199-1400335:-1:exon

LOC113885292
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1451702..1453531
location: region:1451702-1453531:1
so has part: feature:1451702-1453531:1:exon

113885292
type: Gene
SIO_000068: ncbigene

position:1451702:1
position: 1451702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453531:1
position: 1453531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1451702-1453531:1:exon

LOC113885292
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885292
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113885292
subclass of: SO_0000673
so part of: LOC113885292
location: 1451702..1453531
location: region:1451702-1453531:1
so has part: feature:1451702-1453531:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1451702-1453531:1:exon

ABCB10
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: ABCB10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1463018..1497363)
location: region:1463018-1497363:-1
so has part: feature:1463018-1497363:-1:exon
subclass of: SO_0000010

113885251
type: Gene
SIO_000068: ncbigene

position:1463018:-1
position: 1463018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497363:-1
position: 1497363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1463018-1497363:-1:exon

ABCB10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ABCB10
product: ATP binding cassette subfamily B member 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 ESTs, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 191 samples with support for all annotated introns
transcript id: XM_027530397.1
SIO_010081: ABCB10
subclass of: SO_0000673
so part of: ABCB10
location: complement(join(1463018..1465165,1465625..1465659,1467675..1467718,1471980..1472160,1473287..1473366,1475152..1475361,1476505..1476600,1478823..1478958,1480073..1480219,1480973..1481107,1485940..1486142,1486879..1487079,1496827..1497362))
location: region:1463018-1497362:-1
so has part: feature:1496827-1497362:-1:exon
so has part: feature:1486879-1487079:-1:exon
so has part: feature:1485940-1486142:-1:exon
so has part: feature:1480973-1481107:-1:exon
so has part: feature:1480073-1480219:-1:exon
so has part: feature:1478823-1478958:-1:exon
so has part: feature:1476505-1476600:-1:exon
so has part: feature:1475152-1475361:-1:exon
so has part: feature:1473287-1473366:-1:exon
so has part: feature:1471980-1472160:-1:exon
so has part: feature:1467675-1467718:-1:exon
so has part: feature:1465625-1465659:-1:exon
so has part: feature:1463018-1465165:-1:exon

position:1497362:-1
position: 1497362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1496827-1497362:-1:exon

position:1496827:-1
position: 1496827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1486879-1487079:-1:exon

position:1486879:-1
position: 1486879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1487079:-1
position: 1487079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1485940-1486142:-1:exon

position:1485940:-1
position: 1485940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1486142:-1
position: 1486142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1480973-1481107:-1:exon

position:1480973:-1
position: 1480973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1481107:-1
position: 1481107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1480073-1480219:-1:exon

position:1480073:-1
position: 1480073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480219:-1
position: 1480219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1478823-1478958:-1:exon

position:1478823:-1
position: 1478823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1478958:-1
position: 1478958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1476505-1476600:-1:exon

position:1476505:-1
position: 1476505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1476600:-1
position: 1476600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1475152-1475361:-1:exon

position:1475152:-1
position: 1475152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1475361:-1
position: 1475361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1473287-1473366:-1:exon

position:1473287:-1
position: 1473287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1473366:-1
position: 1473366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1471980-1472160:-1:exon

position:1471980:-1
position: 1471980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1472160:-1
position: 1472160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1467675-1467718:-1:exon

position:1467675:-1
position: 1467675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1467718:-1
position: 1467718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1465625-1465659:-1:exon

position:1465625:-1
position: 1465625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1465659:-1
position: 1465659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1463018-1465165:-1:exon

position:1465165:-1
position: 1465165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABCB10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ABCB10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family B member 10, mitochondrial isoform X1
translation: MRGPPAWPLRLLLRRGAAARSPETRTLSTHPAFARPGGVEPALLAGDWAARAPRRWAGGGPGGPAGGAGLARLLALWSRHPGLSRCWALAGPVASRLPRSALPGCSTLVARAAGEAWRRGPALPAAAATPGHDPLLRPAAARRSEAQKLLSLAQPERRRLAAAVGFLAVSSVITMSAPFFLGKIIDVIYTNPSADCSSSLTRLCLALGGVFLCGAAANAVRVYLMQTSGQRIVNRLRASLFSSVLKQEVAFFDKTRTGELINRLSADAALLGRSVTENLSDGLRAGAQASVGIGMMFFVSPKLATFVLSVVPPVSIIAVLYGRYLRKLTKVTQDSLAQATQLAEERIGNIRTVRAFGKEMTEIEKYTSKVDHVMQLARKEAFARAGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGVSVGGLSSFYSELMKGLGAGSRLWELLEREPELPFNEGAVLNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGAGKSTVISLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADNPASVTAEQIEQAAAVANAAAFIQNFPQGFSTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEHLVQQALDRLMEGRTVFIIAHRLSTIKNANVVAVLDQGRIIECGKHEELLLKPDGMYRKLMNKQSFISA
SIO_010081: ABCB10
subclass of: SO_0000673
so part of: ABCB10
location: complement(join(1464934..1465165,1465625..1465659,1467675..1467718,1471980..1472160,1473287..1473366,1475152..1475361,1476505..1476600,1478823..1478958,1480073..1480219,1480973..1481107,1485940..1486142,1486879..1487079,1496827..1497310))
location: region:1464934-1497310:-1
so has part: feature:1496827-1497310:-1:exon
so has part: feature:1486879-1487079:-1:exon
so has part: feature:1485940-1486142:-1:exon
so has part: feature:1480973-1481107:-1:exon
so has part: feature:1480073-1480219:-1:exon
so has part: feature:1478823-1478958:-1:exon
so has part: feature:1476505-1476600:-1:exon
so has part: feature:1475152-1475361:-1:exon
so has part: feature:1473287-1473366:-1:exon
so has part: feature:1471980-1472160:-1:exon
so has part: feature:1467675-1467718:-1:exon
so has part: feature:1465625-1465659:-1:exon
so has part: feature:1464934-1465165:-1:exon

XP_027386198.1
type: Protein
SIO_000068: ncbiprotein

position:1464934:-1
position: 1464934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497310:-1
position: 1497310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1496827-1497310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1486879-1487079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1485940-1486142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1480973-1481107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1480073-1480219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1478823-1478958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1476505-1476600:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1475152-1475361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1473287-1473366:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1471980-1472160:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1467675-1467718:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1465625-1465659:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1464934-1465165:-1:exon

ABCB10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ABCB10
product: ATP binding cassette subfamily B member 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_027530398.1
SIO_010081: ABCB10
subclass of: SO_0000673
so part of: ABCB10
location: complement(join(1465696..1467481,1467675..1467718,1471980..1472160,1473287..1473366,1475152..1475361,1476505..1476600,1478823..1478958,1480073..1480219,1480973..1481107,1485940..1486142,1486879..1487079,1496827..1497363))
location: region:1465696-1497363:-1
so has part: feature:1496827-1497363:-1:exon
so has part: feature:1486879-1487079:-1:exon
so has part: feature:1485940-1486142:-1:exon
so has part: feature:1480973-1481107:-1:exon
so has part: feature:1480073-1480219:-1:exon
so has part: feature:1478823-1478958:-1:exon
so has part: feature:1476505-1476600:-1:exon
so has part: feature:1475152-1475361:-1:exon
so has part: feature:1473287-1473366:-1:exon
so has part: feature:1471980-1472160:-1:exon
so has part: feature:1467675-1467718:-1:exon
so has part: feature:1465696-1467481:-1:exon

position:1465696:-1
position: 1465696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1496827-1497363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1486879-1487079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1485940-1486142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1480973-1481107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1480073-1480219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1478823-1478958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1476505-1476600:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1475152-1475361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1473287-1473366:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1471980-1472160:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1467675-1467718:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1465696-1467481:-1:exon

position:1467481:-1
position: 1467481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABCB10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ABCB10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family B member 10, mitochondrial isoform X2
translation: MRGPPAWPLRLLLRRGAAARSPETRTLSTHPAFARPGGVEPALLAGDWAARAPRRWAGGGPGGPAGGAGLARLLALWSRHPGLSRCWALAGPVASRLPRSALPGCSTLVARAAGEAWRRGPALPAAAATPGHDPLLRPAAARRSEAQKLLSLAQPERRRLAAAVGFLAVSSVITMSAPFFLGKIIDVIYTNPSADCSSSLTRLCLALGGVFLCGAAANAVRVYLMQTSGQRIVNRLRASLFSSVLKQEVAFFDKTRTGELINRLSADAALLGRSVTENLSDGLRAGAQASVGIGMMFFVSPKLATFVLSVVPPVSIIAVLYGRYLRKLTKVTQDSLAQATQLAEERIGNIRTVRAFGKEMTEIEKYTSKVDHVMQLARKEAFARAGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGVSVGGLSSFYSELMKGLGAGSRLWELLEREPELPFNEGAVLNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGAGKSTVISLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADNPASVTAEQIEQAAAVANAAAFIQNFPQGFSTVVGEKGVLLSGGQKQRIAIARALLKELSTVLELSEGEKFNT
SIO_010081: ABCB10
subclass of: SO_0000673
so part of: ABCB10
location: complement(join(1467431..1467481,1467675..1467718,1471980..1472160,1473287..1473366,1475152..1475361,1476505..1476600,1478823..1478958,1480073..1480219,1480973..1481107,1485940..1486142,1486879..1487079,1496827..1497310))
location: region:1467431-1497310:-1
so has part: feature:1496827-1497310:-1:exon
so has part: feature:1486879-1487079:-1:exon
so has part: feature:1485940-1486142:-1:exon
so has part: feature:1480973-1481107:-1:exon
so has part: feature:1480073-1480219:-1:exon
so has part: feature:1478823-1478958:-1:exon
so has part: feature:1476505-1476600:-1:exon
so has part: feature:1475152-1475361:-1:exon
so has part: feature:1473287-1473366:-1:exon
so has part: feature:1471980-1472160:-1:exon
so has part: feature:1467675-1467718:-1:exon
so has part: feature:1467431-1467481:-1:exon

XP_027386199.1
type: Protein
SIO_000068: ncbiprotein

position:1467431:-1
position: 1467431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1496827-1497310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1486879-1487079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1485940-1486142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1480973-1481107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1480073-1480219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1478823-1478958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1476505-1476600:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1475152-1475361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1473287-1473366:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1471980-1472160:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1467675-1467718:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1467431-1467481:-1:exon

TAF5L
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TAF5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1536548..1568960)
location: region:1536548-1568960:-1
so has part: feature:1536548-1568960:-1:exon
subclass of: SO_0000010

113885252
type: Gene
SIO_000068: ncbigene

position:1536548:-1
position: 1536548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1568960:-1
position: 1568960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1536548-1568960:-1:exon

TAF5L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TAF5L
product: TATA-box binding protein associated factor 5 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 194 samples with support for all annotated introns
transcript id: XM_027530400.1
SIO_010081: TAF5L
subclass of: SO_0000673
so part of: TAF5L
location: complement(join(1536548..1539061,1546121..1546845,1553531..1553635,1556787..1556931,1568736..1568960))
location: region:1536548-1568960:-1
so has part: feature:1568736-1568960:-1:exon
so has part: feature:1556787-1556931:-1:exon
so has part: feature:1553531-1553635:-1:exon
so has part: feature:1546121-1546845:-1:exon
so has part: feature:1536548-1539061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1568736-1568960:-1:exon

position:1568736:-1
position: 1568736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1556787-1556931:-1:exon

position:1556787:-1
position: 1556787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1556931:-1
position: 1556931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1553531-1553635:-1:exon

position:1553531:-1
position: 1553531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1553635:-1
position: 1553635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1546121-1546845:-1:exon

position:1546121:-1
position: 1546121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1546845:-1
position: 1546845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1536548-1539061:-1:exon

position:1539061:-1
position: 1539061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAF5L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TAF5L
product: TATA-box binding protein associated factor 5 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_027530399.1
SIO_010081: TAF5L
subclass of: SO_0000673
so part of: TAF5L
location: complement(join(1536548..1539061,1546121..1546845,1553531..1553635,1556787..1556931,1567171..1567330,1568736..1568910))
location: region:1536548-1568910:-1
so has part: feature:1568736-1568910:-1:exon
so has part: feature:1567171-1567330:-1:exon
so has part: feature:1556787-1556931:-1:exon
so has part: feature:1553531-1553635:-1:exon
so has part: feature:1546121-1546845:-1:exon
so has part: feature:1536548-1539061:-1:exon

position:1568910:-1
position: 1568910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1568736-1568910:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1567171-1567330:-1:exon

position:1567171:-1
position: 1567171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567330:-1
position: 1567330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1556787-1556931:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1553531-1553635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1546121-1546845:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1536548-1539061:-1:exon

TAF5L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TAF5L
product: TATA-box binding protein associated factor 5 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_027530401.1
SIO_010081: TAF5L
subclass of: SO_0000673
so part of: TAF5L
location: complement(join(1536548..1539061,1546121..1546845,1553531..1553635,1556787..1556931,1561922..1561942))
location: region:1536548-1561942:-1
so has part: feature:1561922-1561942:-1:exon
so has part: feature:1556787-1556931:-1:exon
so has part: feature:1553531-1553635:-1:exon
so has part: feature:1546121-1546845:-1:exon
so has part: feature:1536548-1539061:-1:exon

position:1561942:-1
position: 1561942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1561922-1561942:-1:exon

position:1561922:-1
position: 1561922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1556787-1556931:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1553531-1553635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1546121-1546845:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1536548-1539061:-1:exon

TAF5L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TAF5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
translation: MVMKRVRTEQIQMAVSCYLKRRQYGDADGPVKQGLRLSQSTEEMAASLTVQSESGCANIVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLTLIQNSPKSTVESFYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYVVRLQEDSYNYLLRYLQSDNNTALCRILAWHIHLDVQPAKRTDYQLYTSGGSFRGEGGGLEPADMPAPILQNEAALELLQESIKRVKDGPPSLTTIYFYAFYNTEQLLNTAEVSPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDFLEEEDDEDDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
SIO_010081: TAF5L
subclass of: SO_0000673
so part of: TAF5L
location: complement(join(1538264..1539061,1546121..1546845,1553531..1553635,1556787..1556931,1567171..1567173))
location: region:1538264-1567173:-1
so has part: feature:1567171-1567173:-1:exon
so has part: feature:1556787-1556931:-1:exon
so has part: feature:1553531-1553635:-1:exon
so has part: feature:1546121-1546845:-1:exon
so has part: feature:1538264-1539061:-1:exon

XP_027386200.1
type: Protein
SIO_000068: ncbiprotein

position:1538264:-1
position: 1538264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567173:-1
position: 1567173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567171-1567173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556787-1556931:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1553531-1553635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1546121-1546845:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1538264-1539061:-1:exon

TAF5L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TAF5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X2
translation: MKRVRTEQIQMAVSCYLKRRQYGDADGPVKQGLRLSQSTEEMAASLTVQSESGCANIVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLTLIQNSPKSTVESFYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYVVRLQEDSYNYLLRYLQSDNNTALCRILAWHIHLDVQPAKRTDYQLYTSGGSFRGEGGGLEPADMPAPILQNEAALELLQESIKRVKDGPPSLTTIYFYAFYNTEQLLNTAEVSPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDFLEEEDDEDDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
SIO_010081: TAF5L
subclass of: SO_0000673
so part of: TAF5L
location: complement(join(1538264..1539061,1546121..1546845,1553531..1553635,1556787..1556928))
location: region:1538264-1556928:-1
so has part: feature:1556787-1556928:-1:exon
so has part: feature:1553531-1553635:-1:exon
so has part: feature:1546121-1546845:-1:exon
so has part: feature:1538264-1539061:-1:exon

XP_027386201.1
type: Protein
SIO_000068: ncbiprotein

position:1556928:-1
position: 1556928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1556787-1556928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1553531-1553635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1546121-1546845:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1538264-1539061:-1:exon

TAF5L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TAF5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X2
translation: MKRVRTEQIQMAVSCYLKRRQYGDADGPVKQGLRLSQSTEEMAASLTVQSESGCANIVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLTLIQNSPKSTVESFYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYVVRLQEDSYNYLLRYLQSDNNTALCRILAWHIHLDVQPAKRTDYQLYTSGGSFRGEGGGLEPADMPAPILQNEAALELLQESIKRVKDGPPSLTTIYFYAFYNTEQLLNTAEVSPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDFLEEEDDEDDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
SIO_010081: TAF5L
subclass of: SO_0000673
so part of: TAF5L
location: complement(join(1538264..1539061,1546121..1546845,1553531..1553635,1556787..1556928))
location: region:1538264-1556928:-1
so has part: feature:1556787-1556928:-1:exon
so has part: feature:1553531-1553635:-1:exon
so has part: feature:1546121-1546845:-1:exon
so has part: feature:1538264-1539061:-1:exon

XP_027386202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1556787-1556928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1553531-1553635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1546121-1546845:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1538264-1539061:-1:exon

URB2
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: URB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1569048..1595278
location: region:1569048-1595278:1
so has part: feature:1569048-1595278:1:exon
subclass of: SO_0000010

113885347
type: Gene
SIO_000068: ncbigene

position:1569048:1
position: 1569048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1595278:1
position: 1595278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1569048-1595278:1:exon

URB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: URB2
product: URB2 ribosome biogenesis homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_027530629.1
SIO_010081: URB2
subclass of: SO_0000673
so part of: URB2
location: join(1569048..1569342,1571069..1571202,1573209..1573385,1575189..1578510,1581140..1581300,1583318..1583428,1583907..1584149,1587752..1587839,1590822..1590961,1594550..1595278)
location: region:1569048-1595278:1
so has part: feature:1569048-1569342:1:exon
so has part: feature:1571069-1571202:1:exon
so has part: feature:1573209-1573385:1:exon
so has part: feature:1575189-1578510:1:exon
so has part: feature:1581140-1581300:1:exon
so has part: feature:1583318-1583428:1:exon
so has part: feature:1583907-1584149:1:exon
so has part: feature:1587752-1587839:1:exon
so has part: feature:1590822-1590961:1:exon
so has part: feature:1594550-1595278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1569048-1569342:1:exon

position:1569342:1
position: 1569342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1571069-1571202:1:exon

position:1571069:1
position: 1571069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571202:1
position: 1571202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1573209-1573385:1:exon

position:1573209:1
position: 1573209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1573385:1
position: 1573385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1575189-1578510:1:exon

position:1575189:1
position: 1575189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1578510:1
position: 1578510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1581140-1581300:1:exon

position:1581140:1
position: 1581140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581300:1
position: 1581300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1583318-1583428:1:exon

position:1583318:1
position: 1583318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1583428:1
position: 1583428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1583907-1584149:1:exon

position:1583907:1
position: 1583907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584149:1
position: 1584149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1587752-1587839:1:exon

position:1587752:1
position: 1587752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587839:1
position: 1587839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1590822-1590961:1:exon

position:1590822:1
position: 1590822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1590961:1
position: 1590961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1594550-1595278:1:exon

position:1594550:1
position: 1594550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

URB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: URB2
product: URB2 ribosome biogenesis homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 110 samples with support for all annotated introns
transcript id: XM_027530628.1
SIO_010081: URB2
subclass of: SO_0000673
so part of: URB2
location: join(1569048..1569275,1571069..1571202,1573209..1573385,1575189..1578510,1581140..1581300,1583318..1583428,1583907..1584149,1587752..1587839,1590822..1590961,1594550..1595278)
location: region:1569048-1595278:1
so has part: feature:1569048-1569275:1:exon
so has part: feature:1571069-1571202:1:exon
so has part: feature:1573209-1573385:1:exon
so has part: feature:1575189-1578510:1:exon
so has part: feature:1581140-1581300:1:exon
so has part: feature:1583318-1583428:1:exon
so has part: feature:1583907-1584149:1:exon
so has part: feature:1587752-1587839:1:exon
so has part: feature:1590822-1590961:1:exon
so has part: feature:1594550-1595278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1569048-1569275:1:exon

position:1569275:1
position: 1569275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1571069-1571202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1573209-1573385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1575189-1578510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1581140-1581300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1583318-1583428:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1583907-1584149:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1587752-1587839:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1590822-1590961:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1594550-1595278:1:exon

URB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: URB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unhealthy ribosome biogenesis protein 2 homolog
translation: MAAVYSGISVKLKSKTTSWEDKLKLAHFAWISHQCLLPNKEQVLLDWARQSLVAFYKKKLELKEDIVERLWIYVDNILHSRKLQNLLKNGKTVNLHISLIKIINERIAEFSLLGSQRNICVVLSCCQGILSTPALAVVYTARQELIVDLLSQLCWLACRQPGAIIPQLFEVIHLSLSHYLSLQQQQVNPRRAFGEVTGHLLQPCLVLRHYLLGGTWTQAGQGQLRPALGRDIRNQIEAVLQGGAFQPELLPSYKEELLDQQQGDSKIGAMKNLLAPLGTMIARLVDAGYCDPSLQASVVANSVALLYKLFVESYLKEGNQLLCFKVLPQLFGCLRISHLEEQRQALSMSDWTTELLVVEQLLNSVASNTIYNIAADRIRHGEAQFHFYRHLAELLLKHPQALVPAWFRCLKVLLSLNHLILEPDLDDLLASAWIDAEVTELRTQKAQEALIHTLFQTYAKLRQVPRLFEEVLGVLCRPAAEALRLPVLTAGPAAVLQECLPELPLSQVLDMWALVQERFQSLVLSGLRGDEDMALKSLSLSSLLCCVMVNARSLDAGSPLPVVRRMRQAMDGMLQGLVKPLLDLLRKPWPSTPELWQQKVGDSALLLAHTWAQVDTVLRLSCSPYRSEPGTLAGATPEPSGPLPLLPGVEAKHWEEIEEFTVQSDSLSQYCLEQLHLQRMKNTLLQASFQSEEALCALRRDAAYILGSGRASVTRGMSASWDGQVGTVSVHTYPIAHWHLVMSNIMILISYLGPDDLQYLASILLRTLPVSKAQEGLVEEEPDITLGKISQAVLHSPLFPEMQSLHSAFFLGLTARCGSILCAAAQRETALLRQQLPWLFEEDYMVVAHWESRFAKVGAEGVEPREEIAPNILSLARADSPIQLEGGQLESILQLLGVLSALQLDSLLAPYHVHCFLLLLSVAVTTPGSSCSSSLTLRVLRTCYQLLGCLQRGKSAQAVLRVMYVSDIFEVTLTSLFRASRRFLVSVNDPSWLEFLQVVGTFLEQLLQMLIQRKLSLGLNFGKILAFLSGHQLHNEVTSGQRSEDQVPLGQQLMLVSLSKVCQVLGPLVKEQKQQDEAPEVLPKLLKEVVLQAGALLQHCMAPGAQGRLPPAVISSLGSLLEADVALRSRQNWTDVSKGTDKALSAYTTLYQTIYAQILLELPALVGDPPSFQAAVQFLTLFFLVPELHPQKDSVCTSVFHSVRKVLADPAIPVQIVEEIEPHLGALFTQMLEAGTTEDFRMWLQCILQGLDVSNLWRADLQAVLSAATLVKLLLNCPCSEEKASLFWRTCPQMVTALMLQTREACQEQPSALALVGPVLDVLAALLRQGEGAISNPHHVSLAFSILLTAPLDHLKPLEYGHIFSRAHNVLFSILQCHPKVMLKTIPSFLNCFHRLVRSIIHEGRQKDKGSAEDLPAVLECARLVERMYSHMAARAEEFRVFSPFMVAQYVVEAQKVTLYPAVKVLLQEGIYLILDLCIESDIQFLRASLQLGVRDVFKELHSDYVKHHKSKREGEKRYAV
SIO_010081: URB2
subclass of: SO_0000673
so part of: URB2
location: join(1571077..1571202,1573209..1573385,1575189..1578510,1581140..1581300,1583318..1583428,1583907..1584149,1587752..1587839,1590822..1590961,1594550..1594747)
location: region:1571077-1594747:1
so has part: feature:1571077-1571202:1:exon
so has part: feature:1573209-1573385:1:exon
so has part: feature:1575189-1578510:1:exon
so has part: feature:1581140-1581300:1:exon
so has part: feature:1583318-1583428:1:exon
so has part: feature:1583907-1584149:1:exon
so has part: feature:1587752-1587839:1:exon
so has part: feature:1590822-1590961:1:exon
so has part: feature:1594550-1594747:1:exon

XP_027386429.1
type: Protein
SIO_000068: ncbiprotein

position:1571077:1
position: 1571077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594747:1
position: 1594747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1571077-1571202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1573209-1573385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1575189-1578510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1581140-1581300:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1583318-1583428:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1583907-1584149:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1587752-1587839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1590822-1590961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1594550-1594747:1:exon

URB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: URB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unhealthy ribosome biogenesis protein 2 homolog
translation: MAAVYSGISVKLKSKTTSWEDKLKLAHFAWISHQCLLPNKEQVLLDWARQSLVAFYKKKLELKEDIVERLWIYVDNILHSRKLQNLLKNGKTVNLHISLIKIINERIAEFSLLGSQRNICVVLSCCQGILSTPALAVVYTARQELIVDLLSQLCWLACRQPGAIIPQLFEVIHLSLSHYLSLQQQQVNPRRAFGEVTGHLLQPCLVLRHYLLGGTWTQAGQGQLRPALGRDIRNQIEAVLQGGAFQPELLPSYKEELLDQQQGDSKIGAMKNLLAPLGTMIARLVDAGYCDPSLQASVVANSVALLYKLFVESYLKEGNQLLCFKVLPQLFGCLRISHLEEQRQALSMSDWTTELLVVEQLLNSVASNTIYNIAADRIRHGEAQFHFYRHLAELLLKHPQALVPAWFRCLKVLLSLNHLILEPDLDDLLASAWIDAEVTELRTQKAQEALIHTLFQTYAKLRQVPRLFEEVLGVLCRPAAEALRLPVLTAGPAAVLQECLPELPLSQVLDMWALVQERFQSLVLSGLRGDEDMALKSLSLSSLLCCVMVNARSLDAGSPLPVVRRMRQAMDGMLQGLVKPLLDLLRKPWPSTPELWQQKVGDSALLLAHTWAQVDTVLRLSCSPYRSEPGTLAGATPEPSGPLPLLPGVEAKHWEEIEEFTVQSDSLSQYCLEQLHLQRMKNTLLQASFQSEEALCALRRDAAYILGSGRASVTRGMSASWDGQVGTVSVHTYPIAHWHLVMSNIMILISYLGPDDLQYLASILLRTLPVSKAQEGLVEEEPDITLGKISQAVLHSPLFPEMQSLHSAFFLGLTARCGSILCAAAQRETALLRQQLPWLFEEDYMVVAHWESRFAKVGAEGVEPREEIAPNILSLARADSPIQLEGGQLESILQLLGVLSALQLDSLLAPYHVHCFLLLLSVAVTTPGSSCSSSLTLRVLRTCYQLLGCLQRGKSAQAVLRVMYVSDIFEVTLTSLFRASRRFLVSVNDPSWLEFLQVVGTFLEQLLQMLIQRKLSLGLNFGKILAFLSGHQLHNEVTSGQRSEDQVPLGQQLMLVSLSKVCQVLGPLVKEQKQQDEAPEVLPKLLKEVVLQAGALLQHCMAPGAQGRLPPAVISSLGSLLEADVALRSRQNWTDVSKGTDKALSAYTTLYQTIYAQILLELPALVGDPPSFQAAVQFLTLFFLVPELHPQKDSVCTSVFHSVRKVLADPAIPVQIVEEIEPHLGALFTQMLEAGTTEDFRMWLQCILQGLDVSNLWRADLQAVLSAATLVKLLLNCPCSEEKASLFWRTCPQMVTALMLQTREACQEQPSALALVGPVLDVLAALLRQGEGAISNPHHVSLAFSILLTAPLDHLKPLEYGHIFSRAHNVLFSILQCHPKVMLKTIPSFLNCFHRLVRSIIHEGRQKDKGSAEDLPAVLECARLVERMYSHMAARAEEFRVFSPFMVAQYVVEAQKVTLYPAVKVLLQEGIYLILDLCIESDIQFLRASLQLGVRDVFKELHSDYVKHHKSKREGEKRYAV
SIO_010081: URB2
subclass of: SO_0000673
so part of: URB2
location: join(1571077..1571202,1573209..1573385,1575189..1578510,1581140..1581300,1583318..1583428,1583907..1584149,1587752..1587839,1590822..1590961,1594550..1594747)
location: region:1571077-1594747:1
so has part: feature:1571077-1571202:1:exon
so has part: feature:1573209-1573385:1:exon
so has part: feature:1575189-1578510:1:exon
so has part: feature:1581140-1581300:1:exon
so has part: feature:1583318-1583428:1:exon
so has part: feature:1583907-1584149:1:exon
so has part: feature:1587752-1587839:1:exon
so has part: feature:1590822-1590961:1:exon
so has part: feature:1594550-1594747:1:exon

XP_027386430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1571077-1571202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1573209-1573385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1575189-1578510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1581140-1581300:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1583318-1583428:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1583907-1584149:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1587752-1587839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1590822-1590961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1594550-1594747:1:exon

LOC113885498
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885498
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1642247..1650021)
location: region:1642247-1650021:-1
so has part: feature:1642247-1650021:-1:exon
subclass of: SO_0000011

113885498
type: Gene
SIO_000068: ncbigene

position:1642247:-1
position: 1642247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1650021:-1
position: 1650021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1642247-1650021:-1:exon

LOC113885498
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113885498
product: uncharacterized LOC113885498
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XR_003509229.1
SIO_010081: LOC113885498
subclass of: SO_0000673
so part of: LOC113885498
location: complement(join(1642247..1644602,1649589..1650021))
location: region:1642247-1650021:-1
so has part: feature:1649589-1650021:-1:exon
so has part: feature:1642247-1644602:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1649589-1650021:-1:exon

position:1649589:-1
position: 1649589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1642247-1644602:-1:exon

position:1644602:-1
position: 1644602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113885500
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1752434..1752936)
location: region:1752434-1752936:-1
so has part: feature:1752434-1752936:-1:exon

113885500
type: Gene
SIO_000068: ncbigene

position:1752434:-1
position: 1752434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1752936:-1
position: 1752936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1752434-1752936:-1:exon

LOC113885500
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885500
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113885500
subclass of: SO_0000673
so part of: LOC113885500
location: complement(1752434..1752936)
location: region:1752434-1752936:-1
so has part: feature:1752434-1752936:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1752434-1752936:-1:exon

GALNT2
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: GALNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2089459..2275225
location: region:2089459-2275225:1
so has part: feature:2089459-2275225:1:exon
subclass of: SO_0000010

113885564
type: Gene
SIO_000068: ncbigene

position:2089459:1
position: 2089459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2275225:1
position: 2275225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2089459-2275225:1:exon

GALNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: GALNT2
product: polypeptide N-acetylgalactosaminyltransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 77 ESTs, 5 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 160 samples with support for all annotated introns
transcript id: XM_027531034.1
SIO_010081: GALNT2
subclass of: SO_0000673
so part of: GALNT2
location: join(2089459..2089701,2185459..2185552,2203359..2203512,2230712..2230810,2231066..2231133,2231385..2231450,2239760..2239881,2240868..2240955,2244143..2244230,2245269..2245372,2249690..2249816,2262244..2262336,2262653..2262736,2264590..2264716,2268388..2268507,2272713..2275225)
location: region:2089459-2275225:1
so has part: feature:2089459-2089701:1:exon
so has part: feature:2185459-2185552:1:exon
so has part: feature:2203359-2203512:1:exon
so has part: feature:2230712-2230810:1:exon
so has part: feature:2231066-2231133:1:exon
so has part: feature:2231385-2231450:1:exon
so has part: feature:2239760-2239881:1:exon
so has part: feature:2240868-2240955:1:exon
so has part: feature:2244143-2244230:1:exon
so has part: feature:2245269-2245372:1:exon
so has part: feature:2249690-2249816:1:exon
so has part: feature:2262244-2262336:1:exon
so has part: feature:2262653-2262736:1:exon
so has part: feature:2264590-2264716:1:exon
so has part: feature:2268388-2268507:1:exon
so has part: feature:2272713-2275225:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2089459-2089701:1:exon

position:2089701:1
position: 2089701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2185459-2185552:1:exon

position:2185459:1
position: 2185459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2185552:1
position: 2185552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2203359-2203512:1:exon

position:2203359:1
position: 2203359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2203512:1
position: 2203512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2230712-2230810:1:exon

position:2230712:1
position: 2230712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2230810:1
position: 2230810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2231066-2231133:1:exon

position:2231066:1
position: 2231066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2231133:1
position: 2231133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2231385-2231450:1:exon

position:2231385:1
position: 2231385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2231450:1
position: 2231450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2239760-2239881:1:exon

position:2239760:1
position: 2239760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2239881:1
position: 2239881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2240868-2240955:1:exon

position:2240868:1
position: 2240868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2240955:1
position: 2240955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2244143-2244230:1:exon

position:2244143:1
position: 2244143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2244230:1
position: 2244230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2245269-2245372:1:exon

position:2245269:1
position: 2245269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2245372:1
position: 2245372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2249690-2249816:1:exon

position:2249690:1
position: 2249690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2249816:1
position: 2249816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2262244-2262336:1:exon

position:2262244:1
position: 2262244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2262336:1
position: 2262336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2262653-2262736:1:exon

position:2262653:1
position: 2262653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2262736:1
position: 2262736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2264590-2264716:1:exon

position:2264590:1
position: 2264590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2264716:1
position: 2264716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2268388-2268507:1:exon

position:2268388:1
position: 2268388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2268507:1
position: 2268507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2272713-2275225:1:exon

position:2272713:1
position: 2272713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GALNT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: GALNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase 2
translation: MRRRSRMLLCFAFLWVLGIAYYMYSGGGSALAAGAGGGAGRKEDWNDIDPIKKKDLHHSNGDEKAHSMETLPPGKVRWRDFNQEAYVGGTMVRSGQDPYARNKFNQVESDKLRMDRAVPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNERWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKKLNCKPFKWYLENVYPELRVPDHQDIAFGALQQGTNCLDTLGHFADGVVGVYECHNAGGNQEWALTKEKSVKHMDLCLTVVDRAPGSLIKLQGCRENDSRQKWEQIEGNSKLRHVGSNLCLDSRAAKTGGLSVEVCGPALSQQWKFSLNLQP
SIO_010081: GALNT2
subclass of: SO_0000673
so part of: GALNT2
location: join(2089576..2089701,2185459..2185552,2203359..2203512,2230712..2230810,2231066..2231133,2231385..2231450,2239760..2239881,2240868..2240955,2244143..2244230,2245269..2245372,2249690..2249816,2262244..2262336,2262653..2262736,2264590..2264716,2268388..2268507,2272713..2272868)
location: region:2089576-2272868:1
so has part: feature:2089576-2089701:1:exon
so has part: feature:2185459-2185552:1:exon
so has part: feature:2203359-2203512:1:exon
so has part: feature:2230712-2230810:1:exon
so has part: feature:2231066-2231133:1:exon
so has part: feature:2231385-2231450:1:exon
so has part: feature:2239760-2239881:1:exon
so has part: feature:2240868-2240955:1:exon
so has part: feature:2244143-2244230:1:exon
so has part: feature:2245269-2245372:1:exon
so has part: feature:2249690-2249816:1:exon
so has part: feature:2262244-2262336:1:exon
so has part: feature:2262653-2262736:1:exon
so has part: feature:2264590-2264716:1:exon
so has part: feature:2268388-2268507:1:exon
so has part: feature:2272713-2272868:1:exon

XP_027386835.1
type: Protein
SIO_000068: ncbiprotein

position:2089576:1
position: 2089576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2272868:1
position: 2272868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2089576-2089701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2185459-2185552:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2203359-2203512:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2230712-2230810:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2231066-2231133:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2231385-2231450:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2239760-2239881:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2240868-2240955:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2244143-2244230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2245269-2245372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2249690-2249816:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2262244-2262336:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2262653-2262736:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2264590-2264716:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2268388-2268507:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2272713-2272868:1:exon

PGBD5
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: PGBD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2306410..2404243)
location: region:2306410-2404243:-1
so has part: feature:2306410-2404243:-1:exon
subclass of: SO_0000010

113885321
type: Gene
SIO_000068: ncbigene

position:2306410:-1
position: 2306410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2404243:-1
position: 2404243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2306410-2404243:-1:exon

PGBD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: PGBD5
product: piggyBac transposable element derived 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_027530575.1
SIO_010081: PGBD5
subclass of: SO_0000673
so part of: PGBD5
location: complement(join(2306410..2307421,2308109..2308328,2309748..2309853,2319306..2319503,2322479..2322659,2342388..2342522,2347617..2348044,2403903..2404243))
location: region:2306410-2404243:-1
so has part: feature:2403903-2404243:-1:exon
so has part: feature:2347617-2348044:-1:exon
so has part: feature:2342388-2342522:-1:exon
so has part: feature:2322479-2322659:-1:exon
so has part: feature:2319306-2319503:-1:exon
so has part: feature:2309748-2309853:-1:exon
so has part: feature:2308109-2308328:-1:exon
so has part: feature:2306410-2307421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2403903-2404243:-1:exon

position:2403903:-1
position: 2403903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2347617-2348044:-1:exon

position:2347617:-1
position: 2347617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2348044:-1
position: 2348044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2342388-2342522:-1:exon

position:2342388:-1
position: 2342388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2342522:-1
position: 2342522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2322479-2322659:-1:exon

position:2322479:-1
position: 2322479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2322659:-1
position: 2322659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2319306-2319503:-1:exon

position:2319306:-1
position: 2319306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2319503:-1
position: 2319503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2309748-2309853:-1:exon

position:2309748:-1
position: 2309748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2309853:-1
position: 2309853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2308109-2308328:-1:exon

position:2308109:-1
position: 2308109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2308328:-1
position: 2308328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2306410-2307421:-1:exon

position:2307421:-1
position: 2307421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PGBD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: PGBD5
product: piggyBac transposable element derived 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_027530574.1
SIO_010081: PGBD5
subclass of: SO_0000673
so part of: PGBD5
location: complement(join(2306410..2308328,2309748..2309853,2319306..2319503,2322479..2322659,2342388..2342522,2347617..2348044,2403903..2404243))
location: region:2306410-2404243:-1
so has part: feature:2403903-2404243:-1:exon
so has part: feature:2347617-2348044:-1:exon
so has part: feature:2342388-2342522:-1:exon
so has part: feature:2322479-2322659:-1:exon
so has part: feature:2319306-2319503:-1:exon
so has part: feature:2309748-2309853:-1:exon
so has part: feature:2306410-2308328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2403903-2404243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2347617-2348044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2342388-2342522:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2322479-2322659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2319306-2319503:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2309748-2309853:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2306410-2308328:-1:exon

PGBD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: PGBD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: piggyBac transposable element-derived protein 5
translation: MAESGGAARRRAPALLEAARARYESLHISDDVFGESGPDSGGNPFYSTSAASRSSSAASSDDEPERPGPARGPGSPAPGAPAAQESEEDEAGAGWSSTLRDRPPPRFEDTGGPTRKMPPSASAMDFFQLFVPDNVLKNMVVQTNLYAKKFQERFGSDGAWVDVTLPEMKAFLGYVISTSTSHCESVLSIWSGGFYSNRSLALVMSQARFEKILKYFHVVAFRSSQTTHGLYKVQPFLDSLQSGFDSAFRPSQTQVLHEPLIDEDPVFIATCTERELRKRKKRKFSLWVRQCSSTGFIIQIYVHLKEGSGPDGLDALKNKPQLHSMVARSLCRNAAGKNYIIFTGPSITSLTLFEEFEKQGIYCCGLLSSRKSDCTGLPPSMLSSPATPPARGQHSIRMKGSMSLICWYNKGHFRFLTNAYSPVQQGVIIKRRSGEIPCPLAVEAFAAHLSYICKYDDKYSKYFISHKPNKTWQQVFWFAVSIAVNNAYILYKMSDAYHVKRYSRAQFGERLVQELLGLEDTSPSL
SIO_010081: PGBD5
subclass of: SO_0000673
so part of: PGBD5
location: complement(join(2308133..2308328,2309748..2309853,2319306..2319503,2322479..2322659,2342388..2342522,2347617..2348044,2403903..2404236))
location: region:2308133-2404236:-1
so has part: feature:2403903-2404236:-1:exon
so has part: feature:2347617-2348044:-1:exon
so has part: feature:2342388-2342522:-1:exon
so has part: feature:2322479-2322659:-1:exon
so has part: feature:2319306-2319503:-1:exon
so has part: feature:2309748-2309853:-1:exon
so has part: feature:2308133-2308328:-1:exon

XP_027386375.1
type: Protein
SIO_000068: ncbiprotein

position:2308133:-1
position: 2308133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2404236:-1
position: 2404236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2403903-2404236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2347617-2348044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2342388-2342522:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2322479-2322659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2319306-2319503:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2309748-2309853:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2308133-2308328:-1:exon

PGBD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: PGBD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: piggyBac transposable element-derived protein 5
translation: MAESGGAARRRAPALLEAARARYESLHISDDVFGESGPDSGGNPFYSTSAASRSSSAASSDDEPERPGPARGPGSPAPGAPAAQESEEDEAGAGWSSTLRDRPPPRFEDTGGPTRKMPPSASAMDFFQLFVPDNVLKNMVVQTNLYAKKFQERFGSDGAWVDVTLPEMKAFLGYVISTSTSHCESVLSIWSGGFYSNRSLALVMSQARFEKILKYFHVVAFRSSQTTHGLYKVQPFLDSLQSGFDSAFRPSQTQVLHEPLIDEDPVFIATCTERELRKRKKRKFSLWVRQCSSTGFIIQIYVHLKEGSGPDGLDALKNKPQLHSMVARSLCRNAAGKNYIIFTGPSITSLTLFEEFEKQGIYCCGLLSSRKSDCTGLPPSMLSSPATPPARGQHSIRMKGSMSLICWYNKGHFRFLTNAYSPVQQGVIIKRRSGEIPCPLAVEAFAAHLSYICKYDDKYSKYFISHKPNKTWQQVFWFAVSIAVNNAYILYKMSDAYHVKRYSRAQFGERLVQELLGLEDTSPSL
SIO_010081: PGBD5
subclass of: SO_0000673
so part of: PGBD5
location: complement(join(2308133..2308328,2309748..2309853,2319306..2319503,2322479..2322659,2342388..2342522,2347617..2348044,2403903..2404236))
location: region:2308133-2404236:-1
so has part: feature:2403903-2404236:-1:exon
so has part: feature:2347617-2348044:-1:exon
so has part: feature:2342388-2342522:-1:exon
so has part: feature:2322479-2322659:-1:exon
so has part: feature:2319306-2319503:-1:exon
so has part: feature:2309748-2309853:-1:exon
so has part: feature:2308133-2308328:-1:exon

XP_027386376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2403903-2404236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2347617-2348044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2342388-2342522:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2322479-2322659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2319306-2319503:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2309748-2309853:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2308133-2308328:-1:exon

LOC113885519
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2404346..2460536
location: region:2404346-2460536:1
so has part: feature:2404346-2460536:1:exon
subclass of: SO_0000011

113885519
type: Gene
SIO_000068: ncbigene

position:2404346:1
position: 2404346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2460536:1
position: 2460536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2404346-2460536:1:exon

LOC113885519
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113885519
product: uncharacterized LOC113885519
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XR_003509241.1
SIO_010081: LOC113885519
subclass of: SO_0000673
so part of: LOC113885519
location: join(2404346..2405040,2458559..2458671,2459769..2460536)
location: region:2404346-2460536:1
so has part: feature:2404346-2405040:1:exon
so has part: feature:2458559-2458671:1:exon
so has part: feature:2459769-2460536:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2404346-2405040:1:exon

position:2405040:1
position: 2405040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2458559-2458671:1:exon

position:2458559:1
position: 2458559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2458671:1
position: 2458671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2459769-2460536:1:exon

position:2459769:1
position: 2459769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885509
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2613042..2623123
location: region:2613042-2623123:1
so has part: feature:2613042-2623123:1:exon
subclass of: SO_0000011

113885509
type: Gene
SIO_000068: ncbigene

position:2613042:1
position: 2613042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2623123:1
position: 2623123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2613042-2623123:1:exon

LOC113885509
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113885509
product: uncharacterized LOC113885509
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003509233.1
SIO_010081: LOC113885509
subclass of: SO_0000673
so part of: LOC113885509
location: join(2613042..2613222,2613335..2613456,2616491..2616734,2618053..2618147,2622270..2622357,2623101..2623123)
location: region:2613042-2623123:1
so has part: feature:2613042-2613222:1:exon
so has part: feature:2613335-2613456:1:exon
so has part: feature:2616491-2616734:1:exon
so has part: feature:2618053-2618147:1:exon
so has part: feature:2622270-2622357:1:exon
so has part: feature:2623101-2623123:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2613042-2613222:1:exon

position:2613222:1
position: 2613222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2613335-2613456:1:exon

position:2613335:1
position: 2613335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2613456:1
position: 2613456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2616491-2616734:1:exon

position:2616491:1
position: 2616491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2616734:1
position: 2616734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2618053-2618147:1:exon

position:2618053:1
position: 2618053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2618147:1
position: 2618147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2622270-2622357:1:exon

position:2622270:1
position: 2622270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2622357:1
position: 2622357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2623101-2623123:1:exon

position:2623101:1
position: 2623101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885199
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2643712..2700734
location: region:2643712-2700734:1
so has part: feature:2643712-2700734:1:exon
subclass of: SO_0000010

113885199
type: Gene
SIO_000068: ncbigene

position:2643712:1
position: 2643712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2700734:1
position: 2700734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2643712-2700734:1:exon

LOC113885199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885199
product: formin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027530325.1
SIO_010081: LOC113885199
subclass of: SO_0000673
so part of: LOC113885199
location: join(2643712..2643717,2645398..2645489,2646481..2646610,2647446..2647592,2654508..2654567,2654702..2654822,2657225..2657317,2664695..2664746,2697922..2700734)
location: region:2643712-2700734:1
so has part: feature:2643712-2643717:1:exon
so has part: feature:2645398-2645489:1:exon
so has part: feature:2646481-2646610:1:exon
so has part: feature:2647446-2647592:1:exon
so has part: feature:2654508-2654567:1:exon
so has part: feature:2654702-2654822:1:exon
so has part: feature:2657225-2657317:1:exon
so has part: feature:2664695-2664746:1:exon
so has part: feature:2697922-2700734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2643712-2643717:1:exon

position:2643717:1
position: 2643717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2645398-2645489:1:exon

position:2645398:1
position: 2645398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2645489:1
position: 2645489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2646481-2646610:1:exon

position:2646481:1
position: 2646481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2646610:1
position: 2646610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2647446-2647592:1:exon

position:2647446:1
position: 2647446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2647592:1
position: 2647592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2654508-2654567:1:exon

position:2654508:1
position: 2654508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2654567:1
position: 2654567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2654702-2654822:1:exon

position:2654702:1
position: 2654702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2654822:1
position: 2654822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2657225-2657317:1:exon

position:2657225:1
position: 2657225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2657317:1
position: 2657317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2664695-2664746:1:exon

position:2664695:1
position: 2664695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2664746:1
position: 2664746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2697922-2700734:1:exon

position:2697922:1
position: 2697922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: formin-2-like
translation: MVGAQSVGLGKIEKHDRSSKDKENAKSLDKPEQFLYELSLIPNFSERVFCILFQSTFSESICSIRCKLELLQKLCETLKHGSGVMQVLGLVLAFGNYMNGGNNTRGQADSFGLDILLKLKDVKSRDNSRSLLSYIVSYDLHNFDEDAGKEQCVFPLPKPQDLFQASQMKFEDFQKDLRKLKKDLRACEVEVGKVYQVPSKEHIQPFKENMEQFIIQAKIDQEAEENSLTETHKCFLETTAYFSMRPKIGEKEVSPNVFFGIWHEFSSHFKDFWKNENKLIL
SIO_010081: LOC113885199
subclass of: SO_0000673
so part of: LOC113885199
location: join(2643712..2643717,2645398..2645489,2646481..2646610,2647446..2647592,2654508..2654567,2654702..2654822,2657225..2657317,2664695..2664746,2697922..2698066)
location: region:2643712-2698066:1
so has part: feature:2643712-2643717:1:exon
so has part: feature:2645398-2645489:1:exon
so has part: feature:2646481-2646610:1:exon
so has part: feature:2647446-2647592:1:exon
so has part: feature:2654508-2654567:1:exon
so has part: feature:2654702-2654822:1:exon
so has part: feature:2657225-2657317:1:exon
so has part: feature:2664695-2664746:1:exon
so has part: feature:2697922-2698066:1:exon

XP_027386126.1
type: Protein
SIO_000068: ncbiprotein

position:2698066:1
position: 2698066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2643712-2643717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2645398-2645489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2646481-2646610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2647446-2647592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2654508-2654567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2654702-2654822:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2657225-2657317:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2664695-2664746:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2697922-2698066:1:exon

LOC113885610
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885610
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2845298..2845416)
location: region:2845298-2845416:-1
so has part: feature:2845298-2845416:-1:exon
subclass of: SO_0000573

113885610
type: Gene
SIO_000068: ncbigene

position:2845298:-1
position: 2845298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2845416:-1
position: 2845416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2845298-2845416:-1:exon

LOC113885610
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885610
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509264.1
SIO_010081: LOC113885610
subclass of: SO_0000673
so part of: LOC113885610
location: complement(2845298..2845416)
location: region:2845298-2845416:-1
so has part: feature:2845298-2845416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2845298-2845416:-1:exon

LOC113885200
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2846327..2848431
location: region:2846327-2848431:1
so has part: feature:2846327-2848431:1:exon
subclass of: SO_0000010

113885200
type: Gene
SIO_000068: ncbigene

position:2846327:1
position: 2846327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2848431:1
position: 2848431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2846327-2848431:1:exon

LOC113885200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885200
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_027530326.1
SIO_010081: LOC113885200
subclass of: SO_0000673
so part of: LOC113885200
location: join(2846327..2846738,2847547..2847859,2848056..2848431)
location: region:2846327-2848431:1
so has part: feature:2846327-2846738:1:exon
so has part: feature:2847547-2847859:1:exon
so has part: feature:2848056-2848431:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2846327-2846738:1:exon

position:2846738:1
position: 2846738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2847547-2847859:1:exon

position:2847547:1
position: 2847547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2847859:1
position: 2847859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2848056-2848431:1:exon

position:2848056:1
position: 2848056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MKVQRHTPKTARGRCRQTDRQTDTSAQAHTGRERQREGDTERLTERRRTGDGQGTGDGIRSEIDTLAQTVTHLRERPCGRSSFPKGGGVGLGPAGPGCTQCPGAGNHPWGPPDFLASEVSKVPFGLATYGETQPPPPGWYGRRRGRLPPGALRALRCACLSLRPAARPSRPQLSTERALHLSCTTRDRSPGGRVAGRRRSAPRTPPPPASTRLARPGGPRGFRDPGPWTRSSRPGMPAADRAPSLLRATWPRSSLASGPAGARGPLSLLRACAQPSRGPERPSCPAPARCPKPPGATSAVNQELVRPAPSPSRGPPCPHAALQAQDLPEGADERHAGTRTDTQTLAGTHATGDSRPAQARQPGPQP
SIO_010081: LOC113885200
subclass of: SO_0000673
so part of: LOC113885200
location: join(2846327..2846738,2847547..2847859,2848056..2848431)
location: region:2846327-2848431:1
so has part: feature:2846327-2846738:1:exon
so has part: feature:2847547-2847859:1:exon
so has part: feature:2848056-2848431:1:exon

XP_027386127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2846327-2846738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2847547-2847859:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2848056-2848431:1:exon

LOC113885622
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885622
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2847446..2847564)
location: region:2847446-2847564:-1
so has part: feature:2847446-2847564:-1:exon
subclass of: SO_0000573

113885622
type: Gene
SIO_000068: ncbigene

position:2847446:-1
position: 2847446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2847564:-1
position: 2847564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2847446-2847564:-1:exon

LOC113885622
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885622
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509275.1
SIO_010081: LOC113885622
subclass of: SO_0000673
so part of: LOC113885622
location: complement(2847446..2847564)
location: region:2847446-2847564:-1
so has part: feature:2847446-2847564:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2847446-2847564:-1:exon

LOC113885201
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885201
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2848477..2850580
location: region:2848477-2850580:1
so has part: feature:2848477-2850580:1:exon
subclass of: SO_0000010

113885201
type: Gene
SIO_000068: ncbigene

position:2848477:1
position: 2848477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2850580:1
position: 2850580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2848477-2850580:1:exon

LOC113885201
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885201
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_027530328.1
SIO_010081: LOC113885201
subclass of: SO_0000673
so part of: LOC113885201
location: join(2848477..2848888,2849697..2850009,2850205..2850580)
location: region:2848477-2850580:1
so has part: feature:2848477-2848888:1:exon
so has part: feature:2849697-2850009:1:exon
so has part: feature:2850205-2850580:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2848477-2848888:1:exon

position:2848888:1
position: 2848888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2849697-2850009:1:exon

position:2849697:1
position: 2849697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2850009:1
position: 2850009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2850205-2850580:1:exon

position:2850205:1
position: 2850205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885201
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885201
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MKVQRHTPKTARGRCRQTDRQTDTSAQAHTGRERQREGDTERLTERRRTGDGQGTGDGIRSEIDTLAQTVTHLRERPCGRSSFPKGGGVGLGPAGPGCTQCPGAGNHPWGPPDFLASEVSKVPFGLATYGETQPPPPGWYGRRRGRLPPGALRALRCACLSLRPAARPSRPQLSTERALHLSCTTRDRSPGGRVAGRRRSAPRTPPPPASTRLARPGGPRGFRDPGPWTRSSRPGMPAADRAPSLLRATWPRSSLASGPAGARGPLSLLRACAQPSRGPERPSCPAPARCPKPPGATSAVNQELVRPAPSPSRGPPCPHAALQAQDLPEGADERHAGTRTDTQTLAGTHATGDSRPAQARQPGPQP
SIO_010081: LOC113885201
subclass of: SO_0000673
so part of: LOC113885201
location: join(2848477..2848888,2849697..2850009,2850205..2850580)
location: region:2848477-2850580:1
so has part: feature:2848477-2848888:1:exon
so has part: feature:2849697-2850009:1:exon
so has part: feature:2850205-2850580:1:exon

XP_027386129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2848477-2848888:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2849697-2850009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2850205-2850580:1:exon

LOC113885629
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885629
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2849596..2849714)
location: region:2849596-2849714:-1
so has part: feature:2849596-2849714:-1:exon
subclass of: SO_0000573

113885629
type: Gene
SIO_000068: ncbigene

position:2849596:-1
position: 2849596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2849714:-1
position: 2849714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2849596-2849714:-1:exon

LOC113885629
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885629
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509281.1
SIO_010081: LOC113885629
subclass of: SO_0000673
so part of: LOC113885629
location: complement(2849596..2849714)
location: region:2849596-2849714:-1
so has part: feature:2849596-2849714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2849596-2849714:-1:exon

LOC113885202
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885202
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2850626..2852729
location: region:2850626-2852729:1
so has part: feature:2850626-2852729:1:exon
subclass of: SO_0000010

113885202
type: Gene
SIO_000068: ncbigene

position:2850626:1
position: 2850626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2852729:1
position: 2852729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2850626-2852729:1:exon

LOC113885202
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885202
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_027530329.1
SIO_010081: LOC113885202
subclass of: SO_0000673
so part of: LOC113885202
location: join(2850626..2851037,2851846..2852158,2852354..2852729)
location: region:2850626-2852729:1
so has part: feature:2850626-2851037:1:exon
so has part: feature:2851846-2852158:1:exon
so has part: feature:2852354-2852729:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2850626-2851037:1:exon

position:2851037:1
position: 2851037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2851846-2852158:1:exon

position:2851846:1
position: 2851846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2852158:1
position: 2852158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2852354-2852729:1:exon

position:2852354:1
position: 2852354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885202
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885202
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MKVQRHTPKTARGRCRQTDRQTDTSAQAHTGRERQREGDTERLTERRRTGDGQGTGDGIRSEIDTLAQTVTHLRERPCGRSSFPKGGGVGLGPAGPGCTQCPGAGNHPWGPPDFLASEVSKVPFGLATYGETQPPPPGWYGRRRGRLPPGALRALRCACLSLRPAARPSRPQLSTERALHLSCTTRDRSPGGRVAGRRRSAPRTPPPPASTRLARPGGPRGFRDPGPWTRSSRPGMPAADRAPSLLRATWPRSSLASGPAGARGPLSLLRACAQPSRGPERPSCPAPARCPKPPGATSAVNQELVRPAPSPSRGPPCPHAALQAQDLPEGADERHAGTRTDTQTLAGTHATGDSRPAQARQPGPQP
SIO_010081: LOC113885202
subclass of: SO_0000673
so part of: LOC113885202
location: join(2850626..2851037,2851846..2852158,2852354..2852729)
location: region:2850626-2852729:1
so has part: feature:2850626-2851037:1:exon
so has part: feature:2851846-2852158:1:exon
so has part: feature:2852354-2852729:1:exon

XP_027386130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2850626-2851037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2851846-2852158:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2852354-2852729:1:exon

LOC113885640
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885640
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2851745..2851863)
location: region:2851745-2851863:-1
so has part: feature:2851745-2851863:-1:exon
subclass of: SO_0000573

113885640
type: Gene
SIO_000068: ncbigene

position:2851745:-1
position: 2851745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2851863:-1
position: 2851863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2851745-2851863:-1:exon

LOC113885640
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885640
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509291.1
SIO_010081: LOC113885640
subclass of: SO_0000673
so part of: LOC113885640
location: complement(2851745..2851863)
location: region:2851745-2851863:-1
so has part: feature:2851745-2851863:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2851745-2851863:-1:exon

LOC113885203
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885203
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2852775..2854879
location: region:2852775-2854879:1
so has part: feature:2852775-2854879:1:exon
subclass of: SO_0000010

113885203
type: Gene
SIO_000068: ncbigene

position:2852775:1
position: 2852775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2854879:1
position: 2854879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2852775-2854879:1:exon

LOC113885203
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885203
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_027530330.1
SIO_010081: LOC113885203
subclass of: SO_0000673
so part of: LOC113885203
location: join(2852775..2853186,2853995..2854307,2854504..2854879)
location: region:2852775-2854879:1
so has part: feature:2852775-2853186:1:exon
so has part: feature:2853995-2854307:1:exon
so has part: feature:2854504-2854879:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2852775-2853186:1:exon

position:2853186:1
position: 2853186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2853995-2854307:1:exon

position:2853995:1
position: 2853995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2854307:1
position: 2854307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2854504-2854879:1:exon

position:2854504:1
position: 2854504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885203
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885203
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MKVQRHTPKTARGRCRQTDRQTDTSAQAHTGRERQREGDTERLTERRRTGDGQGTGDGIRSEIDTLAQTVTHLRERPCGRSSFPKGGGVGLGPAGPGCTQCPGAGNHPWGPPDFLASEVSKVPFGLATYGETQPPPPGWYGRRRGRLPPGALRALRCACLSLRPAARPSRPQLSTERALHLSCTTRDRSPGGRVAGRRRSAPRTPPPPASTRLARPGGPRGFRDPGPWTRSSRPGMPAADRAPSLLRATWPRSSLASGPAGARGPLSLLRACAQPSRGPERPSCPAPARCPKPPGATSAVNQELVRPAPSPSRGPPCPHAALQAQDLPEGADERHAGTRTDTQTLAGTHATGDSRPAQARQPGPQP
SIO_010081: LOC113885203
subclass of: SO_0000673
so part of: LOC113885203
location: join(2852775..2853186,2853995..2854307,2854504..2854879)
location: region:2852775-2854879:1
so has part: feature:2852775-2853186:1:exon
so has part: feature:2853995-2854307:1:exon
so has part: feature:2854504-2854879:1:exon

XP_027386131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2852775-2853186:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2853995-2854307:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2854504-2854879:1:exon

LOC113885651
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885651
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2853894..2854012)
location: region:2853894-2854012:-1
so has part: feature:2853894-2854012:-1:exon
subclass of: SO_0000573

113885651
type: Gene
SIO_000068: ncbigene

position:2853894:-1
position: 2853894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2854012:-1
position: 2854012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2853894-2854012:-1:exon

LOC113885651
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885651
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509301.1
SIO_010081: LOC113885651
subclass of: SO_0000673
so part of: LOC113885651
location: complement(2853894..2854012)
location: region:2853894-2854012:-1
so has part: feature:2853894-2854012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2853894-2854012:-1:exon

LOC113885204
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2854925..2857027
location: region:2854925-2857027:1
so has part: feature:2854925-2857027:1:exon
subclass of: SO_0000010

113885204
type: Gene
SIO_000068: ncbigene

position:2854925:1
position: 2854925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2857027:1
position: 2857027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2854925-2857027:1:exon

LOC113885204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885204
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_027530331.1
SIO_010081: LOC113885204
subclass of: SO_0000673
so part of: LOC113885204
location: join(2854925..2855336,2856144..2856456,2856652..2857027)
location: region:2854925-2857027:1
so has part: feature:2854925-2855336:1:exon
so has part: feature:2856144-2856456:1:exon
so has part: feature:2856652-2857027:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2854925-2855336:1:exon

position:2855336:1
position: 2855336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2856144-2856456:1:exon

position:2856144:1
position: 2856144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2856456:1
position: 2856456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2856652-2857027:1:exon

position:2856652:1
position: 2856652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MKVQRHTPKTARGRCRQTDRQTDTSAQAHTGRERQREGDTERLTERRRTGDGQGTGDGIRSEIDTLAQTVTHLRERPCGRSSFPKGGGVGLGPAGPGCTQCPGAGNHPWGPPDFLASEVSKVPFGLATYGETQPPPPGWYGRRRGRLPPGALRALRCACLSLRPAARPSRPQLSTERALHLSCTTRDRSPGGRVAGRRRSAPRTPPPPASTRLARPGGPRGFRDPGPWTRSSRPGMPAADRAPSLLRATWPRSSLASGPAGARGPLSLLRACAQPSRGPERPSCPAPARCPKPPGATSAVNQELVRPAPSPSRGPPCPHAALQAQDLPEGADERHAGTRTDTQTLAGTHATGDSRPAQARQPGPQP
SIO_010081: LOC113885204
subclass of: SO_0000673
so part of: LOC113885204
location: join(2854925..2855336,2856144..2856456,2856652..2857027)
location: region:2854925-2857027:1
so has part: feature:2854925-2855336:1:exon
so has part: feature:2856144-2856456:1:exon
so has part: feature:2856652-2857027:1:exon

XP_027386132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2854925-2855336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2856144-2856456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2856652-2857027:1:exon

LOC113885612
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885612
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2856043..2856161)
location: region:2856043-2856161:-1
so has part: feature:2856043-2856161:-1:exon
subclass of: SO_0000573

113885612
type: Gene
SIO_000068: ncbigene

position:2856043:-1
position: 2856043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2856161:-1
position: 2856161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2856043-2856161:-1:exon

LOC113885612
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885612
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509265.1
SIO_010081: LOC113885612
subclass of: SO_0000673
so part of: LOC113885612
location: complement(2856043..2856161)
location: region:2856043-2856161:-1
so has part: feature:2856043-2856161:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2856043-2856161:-1:exon

LOC113885205
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2857073..2859172
location: region:2857073-2859172:1
so has part: feature:2857073-2859172:1:exon
subclass of: SO_0000010

113885205
type: Gene
SIO_000068: ncbigene

position:2857073:1
position: 2857073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2859172:1
position: 2859172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2857073-2859172:1:exon

LOC113885205
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885205
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_027530333.1
SIO_010081: LOC113885205
subclass of: SO_0000673
so part of: LOC113885205
location: join(2857073..2857484,2858292..2858604,2858797..2859172)
location: region:2857073-2859172:1
so has part: feature:2857073-2857484:1:exon
so has part: feature:2858292-2858604:1:exon
so has part: feature:2858797-2859172:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2857073-2857484:1:exon

position:2857484:1
position: 2857484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2858292-2858604:1:exon

position:2858292:1
position: 2858292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2858604:1
position: 2858604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2858797-2859172:1:exon

position:2858797:1
position: 2858797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MKVQRHTPKTARGRCRQTDRQTDTSAQAHTGRERQREGDTERLTERRRTGDGQGTGDGIRSEIDTLAQTVTHLRERPCGRSSFPKGGGVGLGPAGPGCTQCPGAGNHPWGPPDFLASEVSKVPFGLATYGETQPPPPGWYGRRRGRLPPGALRALRCACLSLRPAARPSRPQLSTERALHLSCTTRDRSPGGRVAGRRRSAPRTPPPPASTRLARPGGPRGFRDPGPWTRSSRPGMPAADRAPSLLRATWPRSSLASGPAGARGPLSLLRACAQPSRGPERPSCPAPARCPKPPGATSAVNQELVRPAPSPSRGPPCPHAALQAQDLPEGADERHAGTRTDTQTLAGTHATGDSRPAQARQPGPQP
SIO_010081: LOC113885205
subclass of: SO_0000673
so part of: LOC113885205
location: join(2857073..2857484,2858292..2858604,2858797..2859172)
location: region:2857073-2859172:1
so has part: feature:2857073-2857484:1:exon
so has part: feature:2858292-2858604:1:exon
so has part: feature:2858797-2859172:1:exon

XP_027386134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2857073-2857484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2858292-2858604:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2858797-2859172:1:exon

LOC113885613
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885613
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2858191..2858309)
location: region:2858191-2858309:-1
so has part: feature:2858191-2858309:-1:exon
subclass of: SO_0000573

113885613
type: Gene
SIO_000068: ncbigene

position:2858191:-1
position: 2858191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2858309:-1
position: 2858309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2858191-2858309:-1:exon

LOC113885613
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885613
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509266.1
SIO_010081: LOC113885613
subclass of: SO_0000673
so part of: LOC113885613
location: complement(2858191..2858309)
location: region:2858191-2858309:-1
so has part: feature:2858191-2858309:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2858191-2858309:-1:exon

LOC113885206
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2859218..2861318
location: region:2859218-2861318:1
so has part: feature:2859218-2861318:1:exon
subclass of: SO_0000010

113885206
type: Gene
SIO_000068: ncbigene

position:2859218:1
position: 2859218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2861318:1
position: 2861318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2859218-2861318:1:exon

LOC113885206
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885206
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_027530334.1
SIO_010081: LOC113885206
subclass of: SO_0000673
so part of: LOC113885206
location: join(2859218..2859629,2860436..2860748,2860943..2861318)
location: region:2859218-2861318:1
so has part: feature:2859218-2859629:1:exon
so has part: feature:2860436-2860748:1:exon
so has part: feature:2860943-2861318:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2859218-2859629:1:exon

position:2859629:1
position: 2859629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2860436-2860748:1:exon

position:2860436:1
position: 2860436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2860748:1
position: 2860748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2860943-2861318:1:exon

position:2860943:1
position: 2860943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885206
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MKVQRHTPKTARGRCRQTDRQTDTSAQAHTGRERQREGDTERLTERRRTGDGQGTGDGIRSEIDTLAQTVTHLRERPCGRSSFPKGGGVGLGPAGPGCTQCPGAGNHPWGPPDFLASEVSKVPFGLATYGETQPPPPGWYGRRRGRLPPGALRALRCACLSLRPAARPSRPQLSTERALHLSCTTRDRSPGGRVAGRRRSAPRTPPPPASTRLARPGGPRGFRDPGPWTRSSRPGMPAADRAPSLLRATWPRSSLASGPAGARGPLSLLRACAQPSRGPERPSCPAPARCPKPPGATSAVNQELVRPAPSPSRGPPCPHAALQAQDLPEGADERHAGTRTDTQTLAGTHATGDSRPAQARQPGPQP
SIO_010081: LOC113885206
subclass of: SO_0000673
so part of: LOC113885206
location: join(2859218..2859629,2860436..2860748,2860943..2861318)
location: region:2859218-2861318:1
so has part: feature:2859218-2859629:1:exon
so has part: feature:2860436-2860748:1:exon
so has part: feature:2860943-2861318:1:exon

XP_027386135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2859218-2859629:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2860436-2860748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2860943-2861318:1:exon

LOC113885614
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885614
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2860335..2860453)
location: region:2860335-2860453:-1
so has part: feature:2860335-2860453:-1:exon
subclass of: SO_0000573

113885614
type: Gene
SIO_000068: ncbigene

position:2860335:-1
position: 2860335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2860453:-1
position: 2860453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2860335-2860453:-1:exon

LOC113885614
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885614
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509267.1
SIO_010081: LOC113885614
subclass of: SO_0000673
so part of: LOC113885614
location: complement(2860335..2860453)
location: region:2860335-2860453:-1
so has part: feature:2860335-2860453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2860335-2860453:-1:exon

LOC113885207
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2861364..2863467
location: region:2861364-2863467:1
so has part: feature:2861364-2863467:1:exon
subclass of: SO_0000010

113885207
type: Gene
SIO_000068: ncbigene

position:2861364:1
position: 2861364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2863467:1
position: 2863467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2861364-2863467:1:exon

LOC113885207
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885207
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_027530335.1
SIO_010081: LOC113885207
subclass of: SO_0000673
so part of: LOC113885207
location: join(2861364..2861775,2862583..2862895,2863092..2863467)
location: region:2861364-2863467:1
so has part: feature:2861364-2861775:1:exon
so has part: feature:2862583-2862895:1:exon
so has part: feature:2863092-2863467:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2861364-2861775:1:exon

position:2861775:1
position: 2861775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2862583-2862895:1:exon

position:2862583:1
position: 2862583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2862895:1
position: 2862895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2863092-2863467:1:exon

position:2863092:1
position: 2863092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885207
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MKVQRHTPKTARGRCRQTDRQTDTSAQAHTGRERQREGDTERLTERRRTGDGQGTGDGIRSEIDTLAQTVTHLRERPCGRSSFPKGGGVGLGPAGPGCTQCPGAGNHPWGPPDFLASEVSKVPFGLATYGETQPPPPGWYGRRRGRLPPGALRALRCACLSLRPAARPSRPQLSTERALHLSCTTRDRSPGGRVAGRRRSAPRTPPPPASTRLARPGGPRGFRDPGPWTRSSRPGMPAADRAPSLLRATWPRSSLASGPAGARGPLSLLRACAQPSRGPERPSCPAPARCPKPPGATSAVNQELVRPAPSPSRGPPCPHAALQAQDLPEGADERHAGTRTDTQTLAGTHATGDSRPAQARQPGPQP
SIO_010081: LOC113885207
subclass of: SO_0000673
so part of: LOC113885207
location: join(2861364..2861775,2862583..2862895,2863092..2863467)
location: region:2861364-2863467:1
so has part: feature:2861364-2861775:1:exon
so has part: feature:2862583-2862895:1:exon
so has part: feature:2863092-2863467:1:exon

XP_027386136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2861364-2861775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2862583-2862895:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2863092-2863467:1:exon

LOC113885615
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885615
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2862482..2862600)
location: region:2862482-2862600:-1
so has part: feature:2862482-2862600:-1:exon
subclass of: SO_0000573

113885615
type: Gene
SIO_000068: ncbigene

position:2862482:-1
position: 2862482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2862600:-1
position: 2862600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2862482-2862600:-1:exon

LOC113885615
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885615
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509268.1
SIO_010081: LOC113885615
subclass of: SO_0000673
so part of: LOC113885615
location: complement(2862482..2862600)
location: region:2862482-2862600:-1
so has part: feature:2862482-2862600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2862482-2862600:-1:exon

LOC113885209
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885209
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2863513..2865614
location: region:2863513-2865614:1
so has part: feature:2863513-2865614:1:exon
subclass of: SO_0000010

113885209
type: Gene
SIO_000068: ncbigene

position:2863513:1
position: 2863513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2865614:1
position: 2865614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2863513-2865614:1:exon

LOC113885209
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885209
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_027530336.1
SIO_010081: LOC113885209
subclass of: SO_0000673
so part of: LOC113885209
location: join(2863513..2863924,2864732..2865044,2865239..2865614)
location: region:2863513-2865614:1
so has part: feature:2863513-2863924:1:exon
so has part: feature:2864732-2865044:1:exon
so has part: feature:2865239-2865614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2863513-2863924:1:exon

position:2863924:1
position: 2863924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2864732-2865044:1:exon

position:2864732:1
position: 2864732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2865044:1
position: 2865044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2865239-2865614:1:exon

position:2865239:1
position: 2865239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885209
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885209
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MKVQRHTPKTARGRCRQTDRQTDTSAQAHTGRERQREGDTERLTERRRTGDGQGTGDGIRSEIDTLAQTVTHLRERPCGRSSFPKGGGVGLGPAGPGCTQCPGAGNHPWGPPDFLASEVSKVPFGLATYGETQPPPPGWYGRRRGRLPPGALRALRCACLSLRPAARPSRPQLSTERALHLSCTTRDRSPGGRVAGRRRSAPRTPPPPASTRLARPGGPRGFRDPGPWTRSSRPGMPAADRAPSLLRATWPRSSLASGPAGARGPLSLLRACAQPSRGPERPSCPAPARCPKPPGATSAVNQELVRPAPSPSRGPPCPHAALQAQDLPEGADERHAGTRTDTQTLAGTHATGDSRPAQARQPGPQP
SIO_010081: LOC113885209
subclass of: SO_0000673
so part of: LOC113885209
location: join(2863513..2863924,2864732..2865044,2865239..2865614)
location: region:2863513-2865614:1
so has part: feature:2863513-2863924:1:exon
so has part: feature:2864732-2865044:1:exon
so has part: feature:2865239-2865614:1:exon

XP_027386137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2863513-2863924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2864732-2865044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2865239-2865614:1:exon

LOC113885616
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885616
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2864631..2864749)
location: region:2864631-2864749:-1
so has part: feature:2864631-2864749:-1:exon
subclass of: SO_0000573

113885616
type: Gene
SIO_000068: ncbigene

position:2864631:-1
position: 2864631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2864749:-1
position: 2864749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2864631-2864749:-1:exon

LOC113885616
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885616
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509269.1
SIO_010081: LOC113885616
subclass of: SO_0000673
so part of: LOC113885616
location: complement(2864631..2864749)
location: region:2864631-2864749:-1
so has part: feature:2864631-2864749:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2864631-2864749:-1:exon

LOC113885210
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2865660..2867759
location: region:2865660-2867759:1
so has part: feature:2865660-2867759:1:exon
subclass of: SO_0000010

113885210
type: Gene
SIO_000068: ncbigene

position:2865660:1
position: 2865660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2867759:1
position: 2867759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2865660-2867759:1:exon

LOC113885210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885210
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_027530337.1
SIO_010081: LOC113885210
subclass of: SO_0000673
so part of: LOC113885210
location: join(2865660..2866071,2866878..2867190,2867384..2867759)
location: region:2865660-2867759:1
so has part: feature:2865660-2866071:1:exon
so has part: feature:2866878-2867190:1:exon
so has part: feature:2867384-2867759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2865660-2866071:1:exon

position:2866071:1
position: 2866071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2866878-2867190:1:exon

position:2866878:1
position: 2866878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2867190:1
position: 2867190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2867384-2867759:1:exon

position:2867384:1
position: 2867384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MKVQRHTPKTARGRCRQTDRQTDTSAQAHTGRERQREGDTERLTERRRTGDGQGTGDGIRSEIDTLAQTVTHLRERPCGRSSFPKGGGVGLGPAGPGCTQCPGAGNHPWGPPDFLASEVSKVPFGLATYGETQPPPPGWYGRRRGRLPPGALRALRCACLSLRPAARPSRPQLSTERALHLSCTTRDRSPGGRVAGRRRSAPRTPPPPASTRLARPGGPRGFRDPGPWTRSSRPGMPAADRAPSLLRATWPRSSLASGPAGARGPLSLLRACAQPSRGPERPSCPAPARCPKPPGATSAVNQELVRPAPSPSRGPPCPHAALQAQDLPEGADERHAGTRTDTQTLAGTHATGDSRPAQARQPGPQP
SIO_010081: LOC113885210
subclass of: SO_0000673
so part of: LOC113885210
location: join(2865660..2866071,2866878..2867190,2867384..2867759)
location: region:2865660-2867759:1
so has part: feature:2865660-2866071:1:exon
so has part: feature:2866878-2867190:1:exon
so has part: feature:2867384-2867759:1:exon

XP_027386138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2865660-2866071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2866878-2867190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2867384-2867759:1:exon

LOC113885617
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885617
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2866777..2866895)
location: region:2866777-2866895:-1
so has part: feature:2866777-2866895:-1:exon
subclass of: SO_0000573

113885617
type: Gene
SIO_000068: ncbigene

position:2866777:-1
position: 2866777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2866895:-1
position: 2866895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2866777-2866895:-1:exon

LOC113885617
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885617
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509270.1
SIO_010081: LOC113885617
subclass of: SO_0000673
so part of: LOC113885617
location: complement(2866777..2866895)
location: region:2866777-2866895:-1
so has part: feature:2866777-2866895:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2866777-2866895:-1:exon

LOC113885211
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885211
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2867805..2869907
location: region:2867805-2869907:1
so has part: feature:2867805-2869907:1:exon
subclass of: SO_0000010

113885211
type: Gene
SIO_000068: ncbigene

position:2867805:1
position: 2867805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2869907:1
position: 2869907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2867805-2869907:1:exon

LOC113885211
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885211
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_027530338.1
SIO_010081: LOC113885211
subclass of: SO_0000673
so part of: LOC113885211
location: join(2867805..2868216,2869024..2869336,2869532..2869907)
location: region:2867805-2869907:1
so has part: feature:2867805-2868216:1:exon
so has part: feature:2869024-2869336:1:exon
so has part: feature:2869532-2869907:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2867805-2868216:1:exon

position:2868216:1
position: 2868216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2869024-2869336:1:exon

position:2869024:1
position: 2869024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2869336:1
position: 2869336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2869532-2869907:1:exon

position:2869532:1
position: 2869532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885211
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885211
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MKVQRHTPKTARGRCRQTDRQTDTSAQAHTGRERQREGDTERLTERRRTGDGQGTGDGIRSEIDTLAQTVTHLRERPCGRSSFPKGGGVGLGPAGPGCTQCPGAGNHPWGPPDFLASEVSKVPFGLATYGETQPPPPGWYGRRRGRLPPGALRALRCACLSLRPAARPSRPQLSTERALHLSCTTRDRSPGGRVAGRRRSAPRTPPPPASTRLARPGGPRGFRDPGPWTRSSRPGMPAADRAPSLLRATWPRSSLASGPAGARGPLSLLRACAQPSRGPERPSCPAPARCPKPPGATSAVNQELVRPAPSPSRGPPCPHAALQAQDLPEGADERHAGTRTDTQTLAGTHATGDSRPAQARQPGPQP
SIO_010081: LOC113885211
subclass of: SO_0000673
so part of: LOC113885211
location: join(2867805..2868216,2869024..2869336,2869532..2869907)
location: region:2867805-2869907:1
so has part: feature:2867805-2868216:1:exon
so has part: feature:2869024-2869336:1:exon
so has part: feature:2869532-2869907:1:exon

XP_027386139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2867805-2868216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2869024-2869336:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2869532-2869907:1:exon

LOC113885618
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885618
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2868923..2869041)
location: region:2868923-2869041:-1
so has part: feature:2868923-2869041:-1:exon
subclass of: SO_0000573

113885618
type: Gene
SIO_000068: ncbigene

position:2868923:-1
position: 2868923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2869041:-1
position: 2869041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2868923-2869041:-1:exon

LOC113885618
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885618
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509271.1
SIO_010081: LOC113885618
subclass of: SO_0000673
so part of: LOC113885618
location: complement(2868923..2869041)
location: region:2868923-2869041:-1
so has part: feature:2868923-2869041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2868923-2869041:-1:exon

LOC113885212
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2869953..2872054
location: region:2869953-2872054:1
so has part: feature:2869953-2872054:1:exon
subclass of: SO_0000010

113885212
type: Gene
SIO_000068: ncbigene

position:2869953:1
position: 2869953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2872054:1
position: 2872054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2869953-2872054:1:exon

LOC113885212
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885212
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_027530340.1
SIO_010081: LOC113885212
subclass of: SO_0000673
so part of: LOC113885212
location: join(2869953..2870364,2871171..2871483,2871679..2872054)
location: region:2869953-2872054:1
so has part: feature:2869953-2870364:1:exon
so has part: feature:2871171-2871483:1:exon
so has part: feature:2871679-2872054:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2869953-2870364:1:exon

position:2870364:1
position: 2870364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2871171-2871483:1:exon

position:2871171:1
position: 2871171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2871483:1
position: 2871483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2871679-2872054:1:exon

position:2871679:1
position: 2871679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885212
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MKVQRHTPKTARGRCRQTDRQTDTSAQAHTGRERQREGDTERLTERRRTGDGQGTGDGIRSEIDTLAQTVTHLRERPCGRSSFPKGGGVGLGPAGPGCTQCPGAGNHPWGPPDFLASEVSKVPFGLATYGETQPPPPGWYGRRRGRLPPGALRALRCACLSLRPAARPSRPQLSTERALHLSCTTRDRSPGGRVAGRRRSAPRTPPPPASTRLARPGGPRGFRDPGPWTRSSRPGMPAADRAPSLLRATWPRSSLASGPAGARGPLSLLRACAQPSRGPERPSCPAPARCPKPPGATSAVNQELVRPAPSPSRGPPCPHAALQAQDLPEGADERHAGTRTDTQTLAGTHATGDSRPAQARQPGPQP
SIO_010081: LOC113885212
subclass of: SO_0000673
so part of: LOC113885212
location: join(2869953..2870364,2871171..2871483,2871679..2872054)
location: region:2869953-2872054:1
so has part: feature:2869953-2870364:1:exon
so has part: feature:2871171-2871483:1:exon
so has part: feature:2871679-2872054:1:exon

XP_027386141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2869953-2870364:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2871171-2871483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2871679-2872054:1:exon

LOC113885619
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885619
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2871070..2871188)
location: region:2871070-2871188:-1
so has part: feature:2871070-2871188:-1:exon
subclass of: SO_0000573

113885619
type: Gene
SIO_000068: ncbigene

position:2871070:-1
position: 2871070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2871188:-1
position: 2871188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2871070-2871188:-1:exon

LOC113885619
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885619
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509272.1
SIO_010081: LOC113885619
subclass of: SO_0000673
so part of: LOC113885619
location: complement(2871070..2871188)
location: region:2871070-2871188:-1
so has part: feature:2871070-2871188:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2871070-2871188:-1:exon

LOC113885213
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2872100..2874197
location: region:2872100-2874197:1
so has part: feature:2872100-2874197:1:exon
subclass of: SO_0000010

113885213
type: Gene
SIO_000068: ncbigene

position:2872100:1
position: 2872100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2874197:1
position: 2874197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2872100-2874197:1:exon

LOC113885213
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885213
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_027530341.1
SIO_010081: LOC113885213
subclass of: SO_0000673
so part of: LOC113885213
location: join(2872100..2872511,2873319..2873631,2873822..2874197)
location: region:2872100-2874197:1
so has part: feature:2872100-2872511:1:exon
so has part: feature:2873319-2873631:1:exon
so has part: feature:2873822-2874197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2872100-2872511:1:exon

position:2872511:1
position: 2872511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2873319-2873631:1:exon

position:2873319:1
position: 2873319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2873631:1
position: 2873631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2873822-2874197:1:exon

position:2873822:1
position: 2873822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885213
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MKVQRHTPKTARGRCRQTDRQTDTSAQAHTGRERQREGDTERLTERRRTGDGQGTGDGIRSEIDTLAQTVTHLRERPCGRSSFPKGGGVGLGPAGPGCTQCPGAGNHPWGPPDFLASEVSKVPFGLATYGETQPPPPGWYGRRRGRLPPGALRALRCACLSLRPAARPSRPQLSTERALHLSCTTRDRSPGGRVAGRRRSAPRTPPPPASTRLARPGGPRGFRDPGPWTRSSRPGMPAADRAPSLLRATWPRSSLASGPAGARGPLSLLRACAQPSRGPERPSCPAPARCPKPPGATSAVNQELVRPAPSPSRGPPCPHAALQAQDLPEGADERHAGTRTDTQTLAGTHATGDSRPAQARQPGPQP
SIO_010081: LOC113885213
subclass of: SO_0000673
so part of: LOC113885213
location: join(2872100..2872511,2873319..2873631,2873822..2874197)
location: region:2872100-2874197:1
so has part: feature:2872100-2872511:1:exon
so has part: feature:2873319-2873631:1:exon
so has part: feature:2873822-2874197:1:exon

XP_027386142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2872100-2872511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2873319-2873631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2873822-2874197:1:exon

LOC113885620
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885620
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2873218..2873336)
location: region:2873218-2873336:-1
so has part: feature:2873218-2873336:-1:exon
subclass of: SO_0000573

113885620
type: Gene
SIO_000068: ncbigene

position:2873218:-1
position: 2873218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2873336:-1
position: 2873336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2873218-2873336:-1:exon

LOC113885620
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885620
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509273.1
SIO_010081: LOC113885620
subclass of: SO_0000673
so part of: LOC113885620
location: complement(2873218..2873336)
location: region:2873218-2873336:-1
so has part: feature:2873218-2873336:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2873218-2873336:-1:exon

LOC113885214
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2874243..2876341
location: region:2874243-2876341:1
so has part: feature:2874243-2876341:1:exon
subclass of: SO_0000010

113885214
type: Gene
SIO_000068: ncbigene

position:2874243:1
position: 2874243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2876341:1
position: 2876341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2874243-2876341:1:exon

LOC113885214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885214
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_027530342.1
SIO_010081: LOC113885214
subclass of: SO_0000673
so part of: LOC113885214
location: join(2874243..2874654,2875462..2875774,2875966..2876341)
location: region:2874243-2876341:1
so has part: feature:2874243-2874654:1:exon
so has part: feature:2875462-2875774:1:exon
so has part: feature:2875966-2876341:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2874243-2874654:1:exon

position:2874654:1
position: 2874654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2875462-2875774:1:exon

position:2875462:1
position: 2875462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2875774:1
position: 2875774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2875966-2876341:1:exon

position:2875966:1
position: 2875966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MKVQRHTPKTARGRCRQTDRQTDTSAQAHTGRERQREGDTERLTERRRTGDGQGTGDGIRSEIDTLAQTVTHLRERPCGRSSFPKGGGVGLGPAGPGCTQCPGAGNHPWGPPDFLASEVSKVPFGLATYGETQPPPPGWYGRRRGRLPPGALRALRCACLSLRPAARPSRPQLSTERALHLSCTTRDRSPGGRVAGRRRSAPRTPPPPASTRLARPGGPRGFRDPGPWTRSSRPGMPAADRAPSLLRATWPRSSLASGPAGARGPLSLLRACAQPSRGPERPSCPAPARCPKPPGATSAVNQELVRPAPSPSRGPPCPHAALQAQDLPEGADERHAGTRTDTQTLAGTHATGDSRPAQARQPGPQP
SIO_010081: LOC113885214
subclass of: SO_0000673
so part of: LOC113885214
location: join(2874243..2874654,2875462..2875774,2875966..2876341)
location: region:2874243-2876341:1
so has part: feature:2874243-2874654:1:exon
so has part: feature:2875462-2875774:1:exon
so has part: feature:2875966-2876341:1:exon

XP_027386143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2874243-2874654:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2875462-2875774:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2875966-2876341:1:exon

LOC113885621
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885621
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2875361..2875479)
location: region:2875361-2875479:-1
so has part: feature:2875361-2875479:-1:exon
subclass of: SO_0000573

113885621
type: Gene
SIO_000068: ncbigene

position:2875361:-1
position: 2875361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2875479:-1
position: 2875479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2875361-2875479:-1:exon

LOC113885621
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885621
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509274.1
SIO_010081: LOC113885621
subclass of: SO_0000673
so part of: LOC113885621
location: complement(2875361..2875479)
location: region:2875361-2875479:-1
so has part: feature:2875361-2875479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2875361-2875479:-1:exon

LOC113885368
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2879765..2906442)
location: region:2879765-2906442:-1
so has part: feature:2879765-2906442:-1:exon
subclass of: SO_0000010

113885368
type: Gene
SIO_000068: ncbigene

position:2879765:-1
position: 2879765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2906442:-1
position: 2906442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2879765-2906442:-1:exon

LOC113885368
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885368
product: uncharacterized LOC113885368, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_027530677.1
SIO_010081: LOC113885368
subclass of: SO_0000673
so part of: LOC113885368
location: complement(join(2879765..2881734,2906310..2906442))
location: region:2879765-2906442:-1
so has part: feature:2906310-2906442:-1:exon
so has part: feature:2879765-2881734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2906310-2906442:-1:exon

position:2906310:-1
position: 2906310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2879765-2881734:-1:exon

position:2881734:-1
position: 2881734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113885368
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: LOC113885368
product: uncharacterized LOC113885368, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XR_003509185.1
SIO_010081: LOC113885368
so part of: LOC113885368
location: complement(join(2879765..2881734,2898202..2898349,2906310..2906442))
location: region:2879765-2906442:-1
so has part: feature:2906310-2906442:-1:exon
so has part: feature:2898202-2898349:-1:exon
so has part: feature:2879765-2881734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2906310-2906442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2898202-2898349:-1:exon

position:2898202:-1
position: 2898202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2898349:-1
position: 2898349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2879765-2881734:-1:exon

LOC113885368
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: LOC113885368
product: uncharacterized LOC113885368, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_003509186.1
SIO_010081: LOC113885368
so part of: LOC113885368
location: complement(join(2879765..2881734,2898202..2898349,2901491..2901581,2906310..2906442))
location: region:2879765-2906442:-1
so has part: feature:2906310-2906442:-1:exon
so has part: feature:2901491-2901581:-1:exon
so has part: feature:2898202-2898349:-1:exon
so has part: feature:2879765-2881734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2906310-2906442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2901491-2901581:-1:exon

position:2901491:-1
position: 2901491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2901581:-1
position: 2901581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2898202-2898349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2879765-2881734:-1:exon

LOC113885368
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: LOC113885368
product: uncharacterized LOC113885368, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_003509188.1
SIO_010081: LOC113885368
so part of: LOC113885368
location: complement(join(2879765..2881734,2898202..2898349,2904813..2905841))
location: region:2879765-2905841:-1
so has part: feature:2904813-2905841:-1:exon
so has part: feature:2898202-2898349:-1:exon
so has part: feature:2879765-2881734:-1:exon

position:2905841:-1
position: 2905841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2904813-2905841:-1:exon

position:2904813:-1
position: 2904813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2898202-2898349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2879765-2881734:-1:exon

LOC113885368
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: LOC113885368
product: uncharacterized LOC113885368, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XR_003509187.1
SIO_010081: LOC113885368
so part of: LOC113885368
location: complement(join(2879765..2881734,2898202..2898349,2898628..2899232))
location: region:2879765-2899232:-1
so has part: feature:2898628-2899232:-1:exon
so has part: feature:2898202-2898349:-1:exon
so has part: feature:2879765-2881734:-1:exon

position:2899232:-1
position: 2899232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2898628-2899232:-1:exon

position:2898628:-1
position: 2898628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2898202-2898349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2879765-2881734:-1:exon

LOC113885368
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885368
product: uncharacterized LOC113885368, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_027530676.1
SIO_010081: LOC113885368
subclass of: SO_0000673
so part of: LOC113885368
location: complement(join(2879765..2881734,2895001..2895928))
location: region:2879765-2895928:-1
so has part: feature:2895001-2895928:-1:exon
so has part: feature:2879765-2881734:-1:exon

position:2895928:-1
position: 2895928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2895001-2895928:-1:exon

position:2895001:-1
position: 2895001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2879765-2881734:-1:exon

LOC113885368
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113885368
translation: MDECQEAVEEWTEPGPGDSPKACPPAEAGCGPSRQECRPKHKGRPKSLNLPPEAKHPANAQRSFKTKTRTSEKRPKCPQEEVGFWLALGKQIEGLRGKAFVEPPSQNASQFPMCPVMHGSPGHSCSPIRCRSKCRGNLVEADWQPGLPADTQPPNRAWVLHPLALGVLLWGWSLRLSPLPGWFQSVTGIWYCWQVRTAAASGWGSPAARGSAPSALHRGG
SIO_010081: LOC113885368
subclass of: SO_0000673
so part of: LOC113885368
location: complement(2880661..2881323)
location: region:2880661-2881323:-1
so has part: feature:2880661-2881323:-1:exon

XP_027386477.1
type: Protein
SIO_000068: ncbiprotein

position:2880661:-1
position: 2880661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2881323:-1
position: 2881323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2880661-2881323:-1:exon

LOC113885368
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113885368
translation: MDECQEAVEEWTEPGPGDSPKACPPAEAGCGPSRQECRPKHKGRPKSLNLPPEAKHPANAQRSFKTKTRTSEKRPKCPQEEVGFWLALGKQIEGLRGKAFVEPPSQNASQFPMCPVMHGSPGHSCSPIRCRSKCRGNLVEADWQPGLPADTQPPNRAWVLHPLALGVLLWGWSLRLSPLPGWFQSVTGIWYCWQVRTAAASGWGSPAARGSAPSALHRGG
SIO_010081: LOC113885368
subclass of: SO_0000673
so part of: LOC113885368
location: complement(2880661..2881323)
location: region:2880661-2881323:-1
so has part: feature:2880661-2881323:-1:exon

XP_027386478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2880661-2881323:-1:exon

LOC113885368
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: LOC113885368
product: uncharacterized LOC113885368, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XR_003509189.1
SIO_010081: LOC113885368
so part of: LOC113885368
location: complement(join(2902678..2903066,2906310..2906442))
location: region:2902678-2906442:-1
so has part: feature:2906310-2906442:-1:exon
so has part: feature:2902678-2903066:-1:exon

position:2902678:-1
position: 2902678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2906310-2906442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2902678-2903066:-1:exon

position:2903066:-1
position: 2903066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FMN2
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: FMN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2967198..3323863)
location: region:2967198-3323863:-1
so has part: feature:2967198-3323863:-1:exon
subclass of: SO_0000010

113885331
type: Gene
SIO_000068: ncbigene

position:2967198:-1
position: 2967198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3323863:-1
position: 3323863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2967198-3323863:-1:exon

FMN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: FMN2
product: formin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_027530594.1
SIO_010081: FMN2
subclass of: SO_0000673
so part of: FMN2
location: complement(join(2967198..2968704,2970205..2970286,2991971..2992120,3027316..3027367,3034917..3035009,3053418..3053538,3053672..3053731,3058355..3058501,3059304..3059433,3059595..3059686,3107434..3107495,3132630..3132717,3180509..3180653,3182136..3184009,3211498..3211553,3221284..3221431,3287486..3287652,3322406..3323863))
location: region:2967198-3323863:-1
so has part: feature:3322406-3323863:-1:exon
so has part: feature:3287486-3287652:-1:exon
so has part: feature:3221284-3221431:-1:exon
so has part: feature:3211498-3211553:-1:exon
so has part: feature:3182136-3184009:-1:exon
so has part: feature:3180509-3180653:-1:exon
so has part: feature:3132630-3132717:-1:exon
so has part: feature:3107434-3107495:-1:exon
so has part: feature:3059595-3059686:-1:exon
so has part: feature:3059304-3059433:-1:exon
so has part: feature:3058355-3058501:-1:exon
so has part: feature:3053672-3053731:-1:exon
so has part: feature:3053418-3053538:-1:exon
so has part: feature:3034917-3035009:-1:exon
so has part: feature:3027316-3027367:-1:exon
so has part: feature:2991971-2992120:-1:exon
so has part: feature:2970205-2970286:-1:exon
so has part: feature:2967198-2968704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3322406-3323863:-1:exon

position:3322406:-1
position: 3322406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3287486-3287652:-1:exon

position:3287486:-1
position: 3287486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3287652:-1
position: 3287652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3221284-3221431:-1:exon

position:3221284:-1
position: 3221284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3221431:-1
position: 3221431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3211498-3211553:-1:exon

position:3211498:-1
position: 3211498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3211553:-1
position: 3211553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3182136-3184009:-1:exon

position:3182136:-1
position: 3182136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3184009:-1
position: 3184009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3180509-3180653:-1:exon

position:3180509:-1
position: 3180509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3180653:-1
position: 3180653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3132630-3132717:-1:exon

position:3132630:-1
position: 3132630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3132717:-1
position: 3132717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3107434-3107495:-1:exon

position:3107434:-1
position: 3107434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3107495:-1
position: 3107495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3059595-3059686:-1:exon

position:3059595:-1
position: 3059595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3059686:-1
position: 3059686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3059304-3059433:-1:exon

position:3059304:-1
position: 3059304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3059433:-1
position: 3059433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3058355-3058501:-1:exon

position:3058355:-1
position: 3058355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3058501:-1
position: 3058501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3053672-3053731:-1:exon

position:3053672:-1
position: 3053672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3053731:-1
position: 3053731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3053418-3053538:-1:exon

position:3053418:-1
position: 3053418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3053538:-1
position: 3053538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3034917-3035009:-1:exon

position:3034917:-1
position: 3034917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3035009:-1
position: 3035009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3027316-3027367:-1:exon

position:3027316:-1
position: 3027316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3027367:-1
position: 3027367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2991971-2992120:-1:exon

position:2991971:-1
position: 2991971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2992120:-1
position: 2992120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2970205-2970286:-1:exon

position:2970205:-1
position: 2970205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2970286:-1
position: 2970286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2967198-2968704:-1:exon

position:2968704:-1
position: 2968704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FMN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: FMN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: formin-2
translation: MGNQDAKPKRSAGDVPHGGGGGEDAAGPREAEGTKKAGGGKKAPGRHGKGGGGAEPGRKKSRSDPRASVFSNLRIRKTLSKGRGTSGSREDVLDPQALQAGELDSAHSLVTKTPDLSLSADETGLSDTECADPFEVTRPGGPSLARVGGPAVAEYSETAAGAQDGQRTSSGSDTDLYSFHSAAEQEDLLSDIQQAIRLQQLQQQSPGPESPPVSPPSTAPLSGALPGLDRPPPGPNAEAALSAPPDRPPAAEPPAATAFASPGSVPGDRGAADTDEEGEEDAFEDAPRDSPGLECGLAAGEAPCTQEATREEGAPKPVVPVAASPPLSPARSPRRPRARPLLAPCYVRTTTRQLSSPGPSPSPSPSHSPRVQRRPESSLGRGSGAPAAPAAAPARKPRAGRSRSADWTAELGRAPGAGVSAHLVQRGAGGFQGVFAGRTLLEKLFSQQENGPPEEAEKFCSRIIAMGLLLPFSDCFREPCGQNAQSSSAPFDQDQLYTWAAVSQPTHSLDYIEGQFPRRVPAAWPPSKPPDEEHRPKDADTDSQSAVLETPKKCSDAAQQEVCDMKSEGQATVIQRLEQTIEDLKTKIAELEKQYPALDTGLEALRLGEKDVGYERIVQAKSIQTSPMEEGGVLARPPGGSPPAPPPLTAHGESTGLPLPSGPQTMFCSEISLVVSPRRISVQLDAQPSLQPPPPASLPWSDSHGQARSQPSHPPLHTGFETSQEHSAFSSSGNGCDIPTAPPLPLETTEASPAPLTPGAPGPALPSPAGLSPPPCLGPEMLPPPPLPLPGVGVPPPPPLPGVGIPPPPPLPTVGIPTPPPLPGVGIPPAPPLPGVGIPPAPPLPGVGIPPAPPLPGVGIPPAPPLPGVGIPPAPPLPGVGIPPAPPLPGVGIPPPPPLPGVGIPPAPPLPGVGIPPAPPLPGVGIPPAPPLPGVGIPPAPPLPGVGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGVGIPPAPPLPGVGIPPAPPLPGVGIPPAPPLPGVGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGVGIPPTPPLPGVGIPPPPPLPSEGIPPAPPPPPPPGVGIPPPLTPQPPPPPGSGLPLPRQVGSSTLPTPQVCGFLPPPLPLGLFGFGMNQEKGSRKQPVEPCRPMKPLYWTRIQLHSRRDSSASLIWEKIEEPSIDCHEFEELFSKSTVKERKKPISDTITKTKAKQVVKLLSNKRSQAVGILMSSLHLDMKDIQHAVVNLDNSVVDLETLQALYENRAQSDELEKIEKHGRSSKDKENAKSLDKPEQFLYELSLIPNFSERVFCILFQSTFSESICSIRRKLELLQKLCETLKHGSGVMQVLGLVLAFGNYMNGGNNTRGQADGFGLDILPKLKDVKSSDNSRSLLSYIVSYYLRNFDEDAGKEQCVFPLPEPQDLFQASQMKFEDFQKDLRKLKKDLRACEVEAGKVYQVSSKEHIQPFKENMEQFIIQAKIDQEAEENSLTETHKCFLETTAYFFMRPKIGEKEVSPNVFFGIWHEFSSDFKDFWKKENKLILQERVKEAEEVCRQKKGKSLYKIKPRHDSGIKAKISMKT
SIO_010081: FMN2
subclass of: SO_0000673
so part of: FMN2
location: complement(join(2968678..2968704,2970205..2970286,2991971..2992120,3027316..3027367,3034917..3035009,3053418..3053538,3053672..3053731,3058355..3058501,3059304..3059433,3059595..3059686,3107434..3107495,3132630..3132717,3180509..3180653,3182136..3184009,3211498..3211553,3221284..3221431,3287486..3287652,3322406..3323714))
location: region:2968678-3323714:-1
so has part: feature:3322406-3323714:-1:exon
so has part: feature:3287486-3287652:-1:exon
so has part: feature:3221284-3221431:-1:exon
so has part: feature:3211498-3211553:-1:exon
so has part: feature:3182136-3184009:-1:exon
so has part: feature:3180509-3180653:-1:exon
so has part: feature:3132630-3132717:-1:exon
so has part: feature:3107434-3107495:-1:exon
so has part: feature:3059595-3059686:-1:exon
so has part: feature:3059304-3059433:-1:exon
so has part: feature:3058355-3058501:-1:exon
so has part: feature:3053672-3053731:-1:exon
so has part: feature:3053418-3053538:-1:exon
so has part: feature:3034917-3035009:-1:exon
so has part: feature:3027316-3027367:-1:exon
so has part: feature:2991971-2992120:-1:exon
so has part: feature:2970205-2970286:-1:exon
so has part: feature:2968678-2968704:-1:exon

XP_027386395.1
type: Protein
SIO_000068: ncbiprotein

position:2968678:-1
position: 2968678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3323714:-1
position: 3323714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3322406-3323714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3287486-3287652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3221284-3221431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3211498-3211553:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3182136-3184009:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3180509-3180653:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3132630-3132717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3107434-3107495:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3059595-3059686:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3059304-3059433:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3058355-3058501:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3053672-3053731:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3053418-3053538:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3034917-3035009:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3027316-3027367:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2991971-2992120:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2970205-2970286:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2968678-2968704:-1:exon

C28H1orf198
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: C28H1orf198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3579925..3614974)
location: region:3579925-3614974:-1
so has part: feature:3579925-3614974:-1:exon
subclass of: SO_0000010

113885233
type: Gene
SIO_000068: ncbigene

position:3579925:-1
position: 3579925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3614974:-1
position: 3614974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3579925-3614974:-1:exon

C28H1orf198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: C28H1orf198
product: chromosome 28 C1orf198 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 97 ESTs, 5 long SRA reads, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 205 samples with support for all annotated introns
transcript id: XM_027530349.1
SIO_010081: C28H1orf198
subclass of: SO_0000673
so part of: C28H1orf198
location: complement(join(3579925..3582942,3585444..3585989,3599033..3599083,3614564..3614974))
location: region:3579925-3614974:-1
so has part: feature:3614564-3614974:-1:exon
so has part: feature:3599033-3599083:-1:exon
so has part: feature:3585444-3585989:-1:exon
so has part: feature:3579925-3582942:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3614564-3614974:-1:exon

position:3614564:-1
position: 3614564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3599033-3599083:-1:exon

position:3599033:-1
position: 3599033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3599083:-1
position: 3599083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3585444-3585989:-1:exon

position:3585444:-1
position: 3585444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3585989:-1
position: 3585989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3579925-3582942:-1:exon

position:3582942:-1
position: 3582942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C28H1orf198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: C28H1orf198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf198 homolog
translation: MASMAAAIAASRTAVMSANRPLDDRERKRFTYFSSLSPMARKIMQDKEKIREKYGPEWARLPPAQQDEIIDRCLVGPSASAPGDPEELARFPGLRGPTGQKVVRFGDEDITWQDEHSAPFSWETRSQMEFSISSLSIQEPSCSTAGEPRPPSKAPQGSQALRAPQGGKSSSLDALGPAWKEEEASFWKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPGCYRQEPAPRAREAKAEKPSPLRQEQRAAPSVSTECERPQPAQACASPPSEAGPSGPMGKPVSPEVMEAVEDMEDALFLEPVPVQVSSSNVILKTGFDFLDNW
SIO_010081: C28H1orf198
subclass of: SO_0000673
so part of: C28H1orf198
location: complement(join(3582886..3582942,3585444..3585989,3599033..3599083,3614564..3614887))
location: region:3582886-3614887:-1
so has part: feature:3614564-3614887:-1:exon
so has part: feature:3599033-3599083:-1:exon
so has part: feature:3585444-3585989:-1:exon
so has part: feature:3582886-3582942:-1:exon

XP_027386150.1
type: Protein
SIO_000068: ncbiprotein

position:3582886:-1
position: 3582886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3614887:-1
position: 3614887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3614564-3614887:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3599033-3599083:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3585444-3585989:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3582886-3582942:-1:exon

TTC13
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TTC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3654306..3735068)
location: region:3654306-3735068:-1
so has part: feature:3654306-3735068:-1:exon
subclass of: SO_0000010

113885590
type: Gene
SIO_000068: ncbigene

position:3654306:-1
position: 3654306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3735068:-1
position: 3735068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3654306-3735068:-1:exon

TTC13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TTC13
product: tetratricopeptide repeat domain 13
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XM_027531116.1
SIO_010081: TTC13
subclass of: SO_0000673
so part of: TTC13
location: complement(join(3654306..3655089,3656990..3657069,3657212..3657290,3659881..3659960,3661300..3661435,3664025..3664134,3667535..3667619,3668442..3668525,3671278..3671370,3671879..3672011,3672531..3672661,3684064..3684220,3686095..3686269,3687339..3687480,3689093..3689175,3694522..3694632,3695601..3695717,3698404..3698496,3700027..3700092,3710060..3710129,3713479..3713554,3717075..3717169,3734763..3735068))
location: region:3654306-3735068:-1
so has part: feature:3734763-3735068:-1:exon
so has part: feature:3717075-3717169:-1:exon
so has part: feature:3713479-3713554:-1:exon
so has part: feature:3710060-3710129:-1:exon
so has part: feature:3700027-3700092:-1:exon
so has part: feature:3698404-3698496:-1:exon
so has part: feature:3695601-3695717:-1:exon
so has part: feature:3694522-3694632:-1:exon
so has part: feature:3689093-3689175:-1:exon
so has part: feature:3687339-3687480:-1:exon
so has part: feature:3686095-3686269:-1:exon
so has part: feature:3684064-3684220:-1:exon
so has part: feature:3672531-3672661:-1:exon
so has part: feature:3671879-3672011:-1:exon
so has part: feature:3671278-3671370:-1:exon
so has part: feature:3668442-3668525:-1:exon
so has part: feature:3667535-3667619:-1:exon
so has part: feature:3664025-3664134:-1:exon
so has part: feature:3661300-3661435:-1:exon
so has part: feature:3659881-3659960:-1:exon
so has part: feature:3657212-3657290:-1:exon
so has part: feature:3656990-3657069:-1:exon
so has part: feature:3654306-3655089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3734763-3735068:-1:exon

position:3734763:-1
position: 3734763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3717075-3717169:-1:exon

position:3717075:-1
position: 3717075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3717169:-1
position: 3717169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3713479-3713554:-1:exon

position:3713479:-1
position: 3713479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3713554:-1
position: 3713554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3710060-3710129:-1:exon

position:3710060:-1
position: 3710060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3710129:-1
position: 3710129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3700027-3700092:-1:exon

position:3700027:-1
position: 3700027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3700092:-1
position: 3700092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3698404-3698496:-1:exon

position:3698404:-1
position: 3698404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3698496:-1
position: 3698496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3695601-3695717:-1:exon

position:3695601:-1
position: 3695601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3695717:-1
position: 3695717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3694522-3694632:-1:exon

position:3694522:-1
position: 3694522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3694632:-1
position: 3694632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3689093-3689175:-1:exon

position:3689093:-1
position: 3689093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3689175:-1
position: 3689175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3687339-3687480:-1:exon

position:3687339:-1
position: 3687339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3687480:-1
position: 3687480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3686095-3686269:-1:exon

position:3686095:-1
position: 3686095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3686269:-1
position: 3686269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3684064-3684220:-1:exon

position:3684064:-1
position: 3684064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3684220:-1
position: 3684220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3672531-3672661:-1:exon

position:3672531:-1
position: 3672531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3672661:-1
position: 3672661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3671879-3672011:-1:exon

position:3671879:-1
position: 3671879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3672011:-1
position: 3672011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3671278-3671370:-1:exon

position:3671278:-1
position: 3671278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3671370:-1
position: 3671370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3668442-3668525:-1:exon

position:3668442:-1
position: 3668442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3668525:-1
position: 3668525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3667535-3667619:-1:exon

position:3667535:-1
position: 3667535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3667619:-1
position: 3667619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3664025-3664134:-1:exon

position:3664025:-1
position: 3664025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3664134:-1
position: 3664134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3661300-3661435:-1:exon

position:3661300:-1
position: 3661300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3661435:-1
position: 3661435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3659881-3659960:-1:exon

position:3659881:-1
position: 3659881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3659960:-1
position: 3659960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3657212-3657290:-1:exon

position:3657212:-1
position: 3657212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3657290:-1
position: 3657290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3656990-3657069:-1:exon

position:3656990:-1
position: 3656990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3657069:-1
position: 3657069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3654306-3655089:-1:exon

position:3655089:-1
position: 3655089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTC13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TTC13
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 13
translation: MAPAGCCCGGCWGGAVAAADAARSVLVLLLLGVLSAGPGPGALATEHYSPLSLLKQELQHRQQQEAPAGGGCSPQSGDWGDQYSAECGESSFLNFHDSDCEPKGSPPCDSLLSLNTEKILSQAKSIAEQKRFPFATDNDSTNEELAIAYVLIGSGLYDEAIRHFXTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKDHWAKNLPFLIEDYEEQPGLQPHIKDVLHQNFESYKPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTWTNSKVRMNGKTRLMQWRDMFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEIDALYKDLTAKGKVLILSSEFGEADAVCNLILSLVYYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKIPKGKLVDFEAMTAPGSEAFSKIAKSWMNLKSISPSYKTLPSVSETFPTLRSMIEVLNTDSSPRCLKKL
SIO_010081: TTC13
subclass of: SO_0000673
so part of: TTC13
location: complement(join(3654975..3655089,3656990..3657069,3657212..3657290,3659881..3659960,3661300..3661435,3664025..3664134,3667535..3667619,3668442..3668525,3671278..3671370,3671879..3672011,3672531..3672661,3684064..3684220,3686095..3686269,3687339..3687480,3689093..3689175,3694522..3694632,3695601..3695717,3698404..3698496,3700027..3700092,3710060..3710129,3713479..3713554,3717075..3717169,3734763..3735027))
location: region:3654975-3735027:-1
so has part: feature:3734763-3735027:-1:exon
so has part: feature:3717075-3717169:-1:exon
so has part: feature:3713479-3713554:-1:exon
so has part: feature:3710060-3710129:-1:exon
so has part: feature:3700027-3700092:-1:exon
so has part: feature:3698404-3698496:-1:exon
so has part: feature:3695601-3695717:-1:exon
so has part: feature:3694522-3694632:-1:exon
so has part: feature:3689093-3689175:-1:exon
so has part: feature:3687339-3687480:-1:exon
so has part: feature:3686095-3686269:-1:exon
so has part: feature:3684064-3684220:-1:exon
so has part: feature:3672531-3672661:-1:exon
so has part: feature:3671879-3672011:-1:exon
so has part: feature:3671278-3671370:-1:exon
so has part: feature:3668442-3668525:-1:exon
so has part: feature:3667535-3667619:-1:exon
so has part: feature:3664025-3664134:-1:exon
so has part: feature:3661300-3661435:-1:exon
so has part: feature:3659881-3659960:-1:exon
so has part: feature:3657212-3657290:-1:exon
so has part: feature:3656990-3657069:-1:exon
so has part: feature:3654975-3655089:-1:exon

XP_027386917.1
type: Protein
SIO_000068: ncbiprotein

position:3654975:-1
position: 3654975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3735027:-1
position: 3735027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3734763-3735027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3717075-3717169:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3713479-3713554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3710060-3710129:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3700027-3700092:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3698404-3698496:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3695601-3695717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3694522-3694632:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3689093-3689175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3687339-3687480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3686095-3686269:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3684064-3684220:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3672531-3672661:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3671879-3672011:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3671278-3671370:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3668442-3668525:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3667535-3667619:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3664025-3664134:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3661300-3661435:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3659881-3659960:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3657212-3657290:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3656990-3657069:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3654975-3655089:-1:exon

ARV1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: ARV1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3735252..3758583
location: region:3735252-3758583:1
so has part: feature:3735252-3758583:1:exon
subclass of: SO_0000010

113885592
type: Gene
SIO_000068: ncbigene

position:3735252:1
position: 3735252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3758583:1
position: 3758583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3735252-3758583:1:exon

ARV1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ARV1
product: ARV1 homolog, fatty acid homeostasis modulator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 150 samples with support for all annotated introns
transcript id: XM_027531118.1
SIO_010081: ARV1
subclass of: SO_0000673
so part of: ARV1
location: join(3735252..3735515,3746980..3747133,3753538..3753762,3755058..3755204,3757974..3758583)
location: region:3735252-3758583:1
so has part: feature:3735252-3735515:1:exon
so has part: feature:3746980-3747133:1:exon
so has part: feature:3753538-3753762:1:exon
so has part: feature:3755058-3755204:1:exon
so has part: feature:3757974-3758583:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3735252-3735515:1:exon

position:3735515:1
position: 3735515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3746980-3747133:1:exon

position:3746980:1
position: 3746980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3747133:1
position: 3747133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3753538-3753762:1:exon

position:3753538:1
position: 3753538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3753762:1
position: 3753762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3755058-3755204:1:exon

position:3755058:1
position: 3755058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3755204:1
position: 3755204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3757974-3758583:1:exon

position:3757974:1
position: 3757974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARV1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ARV1
product: ARV1 homolog, fatty acid homeostasis modulator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 51 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 204 samples with support for all annotated introns
transcript id: XM_027531117.1
SIO_010081: ARV1
subclass of: SO_0000673
so part of: ARV1
location: join(3735253..3735515,3744315..3744434,3746980..3747133,3753538..3753762,3755058..3755204,3757974..3758583)
location: region:3735253-3758583:1
so has part: feature:3735253-3735515:1:exon
so has part: feature:3744315-3744434:1:exon
so has part: feature:3746980-3747133:1:exon
so has part: feature:3753538-3753762:1:exon
so has part: feature:3755058-3755204:1:exon
so has part: feature:3757974-3758583:1:exon

position:3735253:1
position: 3735253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3735253-3735515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3744315-3744434:1:exon

position:3744315:1
position: 3744315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3744434:1
position: 3744434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3746980-3747133:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3753538-3753762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3755058-3755204:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3757974-3758583:1:exon

ARV1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ARV1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ARV1 isoform X1
translation: MGTGGQNGLRPGKGNTEGVTAGKGKTDEVTVTSNTDASASCQYRCIECNQEAKELYRDYNHGVLKITICKSCQKPVDKYIEYDPVIILINAILCKAQAYRHILFNTKINMHGKLCVFCLLCEAYLRWWQLQDSSRSIDPDDFIRYAKEWDFYRMFAIASLEQTAYFIGIFAFLWVERPIRAKEKLNFTLLLKALLLSSYGKLLLIPAVIWEHDYTPLCLRLIKVFVLTSNFQAIRVTLNINRKLAFLAILSGLLVESTMVYFFQRMEWAVGSDCAIYKSQDF
SIO_010081: ARV1
subclass of: SO_0000673
so part of: ARV1
location: join(3735309..3735515,3744315..3744434,3746980..3747133,3753538..3753762,3755058..3755200)
location: region:3735309-3755200:1
so has part: feature:3735309-3735515:1:exon
so has part: feature:3744315-3744434:1:exon
so has part: feature:3746980-3747133:1:exon
so has part: feature:3753538-3753762:1:exon
so has part: feature:3755058-3755200:1:exon

XP_027386918.1
type: Protein
SIO_000068: ncbiprotein

position:3735309:1
position: 3735309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3755200:1
position: 3755200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3735309-3735515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3744315-3744434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3746980-3747133:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3753538-3753762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3755058-3755200:1:exon

ARV1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ARV1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ARV1 isoform X2
translation: MGTGGQNGLRPGKGNTEGVTAGKGKTDEVTVTSNTDASASCQYRCIECNQEAKELYRDYNHGVLKITICMHGKLCVFCLLCEAYLRWWQLQDSSRSIDPDDFIRYAKEWDFYRMFAIASLEQTAYFIGIFAFLWVERPIRAKEKLNFTLLLKALLLSSYGKLLLIPAVIWEHDYTPLCLRLIKVFVLTSNFQAIRVTLNINRKLAFLAILSGLLVESTMVYFFQRMEWAVGSDCAIYKSQDF
SIO_010081: ARV1
subclass of: SO_0000673
so part of: ARV1
location: join(3735309..3735515,3746980..3747133,3753538..3753762,3755058..3755200)
location: region:3735309-3755200:1
so has part: feature:3735309-3735515:1:exon
so has part: feature:3746980-3747133:1:exon
so has part: feature:3753538-3753762:1:exon
so has part: feature:3755058-3755200:1:exon

XP_027386919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3735309-3735515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3746980-3747133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3753538-3753762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3755058-3755200:1:exon

FAM89A
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: FAM89A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3771632..3791172)
location: region:3771632-3791172:-1
so has part: feature:3771632-3791172:-1:exon
subclass of: SO_0000010

113885428
type: Gene
SIO_000068: ncbigene

position:3771632:-1
position: 3771632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3791172:-1
position: 3791172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3771632-3791172:-1:exon

FAM89A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: FAM89A
product: family with sequence similarity 89 member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 189 samples with support for all annotated introns
transcript id: XM_027530749.1
SIO_010081: FAM89A
subclass of: SO_0000673
so part of: FAM89A
location: complement(join(3771632..3772720,3790826..3791172))
location: region:3771632-3791172:-1
so has part: feature:3790826-3791172:-1:exon
so has part: feature:3771632-3772720:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3790826-3791172:-1:exon

position:3790826:-1
position: 3790826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3771632-3772720:-1:exon

position:3772720:-1
position: 3772720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM89A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: FAM89A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM89A
translation: MSGAGAAGSVRGLRVDGLPPLPKSLSGLLHSASGGGASGGWRHLERLYAQKSRIQDELSRGSAGGGGARAAALPAKPPNLDAALALLRKEMVGLRQLDMSLLCQLYSLYESIQEYKGACQAAASPDSTYALENGFFDEEDEYFQEQNSLQDGKERGPPRDLMLPVSPLPSGDWILESI
SIO_010081: FAM89A
subclass of: SO_0000673
so part of: FAM89A
location: complement(join(3772457..3772720,3790826..3791098))
location: region:3772457-3791098:-1
so has part: feature:3790826-3791098:-1:exon
so has part: feature:3772457-3772720:-1:exon

XP_027386550.1
type: Protein
SIO_000068: ncbiprotein

position:3772457:-1
position: 3772457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3791098:-1
position: 3791098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3790826-3791098:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3772457-3772720:-1:exon

TRIM67
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TRIM67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3926231..3987745
location: region:3926231-3987745:1
so has part: feature:3926231-3987745:1:exon
subclass of: SO_0000010

113885444
type: Gene
SIO_000068: ncbigene

position:3926231:1
position: 3926231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3987745:1
position: 3987745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3926231-3987745:1:exon

TRIM67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TRIM67
product: tripartite motif containing 67, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_027530763.1
SIO_010081: TRIM67
subclass of: SO_0000673
so part of: TRIM67
location: join(3926231..3928163,3965272..3965367,3966909..3967031,3967967..3968077,3969516..3969675,3972320..3972465,3979532..3979670,3981012..3981315,3983108..3983270,3984857..3987745)
location: region:3926231-3987745:1
so has part: feature:3926231-3928163:1:exon
so has part: feature:3965272-3965367:1:exon
so has part: feature:3966909-3967031:1:exon
so has part: feature:3967967-3968077:1:exon
so has part: feature:3969516-3969675:1:exon
so has part: feature:3972320-3972465:1:exon
so has part: feature:3979532-3979670:1:exon
so has part: feature:3981012-3981315:1:exon
so has part: feature:3983108-3983270:1:exon
so has part: feature:3984857-3987745:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3926231-3928163:1:exon

position:3928163:1
position: 3928163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3965272-3965367:1:exon

position:3965272:1
position: 3965272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3965367:1
position: 3965367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3966909-3967031:1:exon

position:3966909:1
position: 3966909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3967031:1
position: 3967031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3967967-3968077:1:exon

position:3967967:1
position: 3967967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3968077:1
position: 3968077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3969516-3969675:1:exon

position:3969516:1
position: 3969516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3969675:1
position: 3969675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3972320-3972465:1:exon

position:3972320:1
position: 3972320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3972465:1
position: 3972465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3979532-3979670:1:exon

position:3979532:1
position: 3979532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3979670:1
position: 3979670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3981012-3981315:1:exon

position:3981012:1
position: 3981012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3981315:1
position: 3981315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3983108-3983270:1:exon

position:3983108:1
position: 3983108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3983270:1
position: 3983270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3984857-3987745:1:exon

position:3984857:1
position: 3984857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TRIM67
product: tripartite motif containing 67, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_027530764.1
SIO_010081: TRIM67
subclass of: SO_0000673
so part of: TRIM67
location: join(3926231..3928163,3965272..3965367,3966909..3967031,3967967..3968077,3969516..3969669,3972320..3972465,3979532..3979670,3981012..3981315,3983108..3983270,3984857..3987745)
location: region:3926231-3987745:1
so has part: feature:3926231-3928163:1:exon
so has part: feature:3965272-3965367:1:exon
so has part: feature:3966909-3967031:1:exon
so has part: feature:3967967-3968077:1:exon
so has part: feature:3969516-3969669:1:exon
so has part: feature:3972320-3972465:1:exon
so has part: feature:3979532-3979670:1:exon
so has part: feature:3981012-3981315:1:exon
so has part: feature:3983108-3983270:1:exon
so has part: feature:3984857-3987745:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3926231-3928163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3965272-3965367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3966909-3967031:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3967967-3968077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3969516-3969669:1:exon

position:3969669:1
position: 3969669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3972320-3972465:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3979532-3979670:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3981012-3981315:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3983108-3983270:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3984857-3987745:1:exon

TRIM67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TRIM67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 67 isoform X1
translation: MEEELKCPVCGSLFREPIILPCSHNVCLPCARTIAVQTPDGEQHLPPPLLHSRGSALSSGAAAAPPLDQEAAAGPACSGAGGSAAGGLGGGAGGGSDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLSSSSSSITCPQCHRSASLDHRGLRGFQRNRLLEAIVQRYQQGRGAAPGASAATAVAICQLCDRTPPEPAATLCEQCDVLYCAACQLKCHPSRGPFAKHRLVQPPPPPAPSEVASGSPGAVQGAPSGSGGCKSPGATGAGAAGGNTARKYPTCPEHEMENYSMYCLSCRTPVCYLCLEEGRHGKHEVKPLGAMWKQHKAQLSQALNGVSDKAKEAKEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALTRQKAKLLTKVTKEREHKLKMVWDQINHCTLKLRQSTGLMEYCLEVIKENDPAGFLQISDALIKRVQVSQEQWVKGALEPKVSAEFELTLDSEPLLQAIHQLDFIQMKCRVPPVPLLQLEKCCTRNNSVTLAWRTPPFTHSPVDGYILELDDGDGGQFREVYVGKETLCTIDGLHFNSTYNARVKAFNSSGVGPYSKTVVLQTSDVAWFTFDPNSGHRDIILSNDNQTATCSSYDDRVVLGTAAFSKGAHYWELHVDRYDNHPDPAFGVARASVVKDMMLGKDDKAWAMYVDNNRSWFMHCNSHTNRTEGGVCKGATVGVLLDLNKHTLTFFINGQQQGPTAFSHVDGVFMPALSLNRNVQVTLHTGLEVPTNLGRPKLSGN
SIO_010081: TRIM67
subclass of: SO_0000673
so part of: TRIM67
location: join(3927123..3928163,3965272..3965367,3966909..3967031,3967967..3968077,3969516..3969675,3972320..3972465,3979532..3979670,3981012..3981315,3983108..3983270,3984857..3984922)
location: region:3927123-3984922:1
so has part: feature:3927123-3928163:1:exon
so has part: feature:3965272-3965367:1:exon
so has part: feature:3966909-3967031:1:exon
so has part: feature:3967967-3968077:1:exon
so has part: feature:3969516-3969675:1:exon
so has part: feature:3972320-3972465:1:exon
so has part: feature:3979532-3979670:1:exon
so has part: feature:3981012-3981315:1:exon
so has part: feature:3983108-3983270:1:exon
so has part: feature:3984857-3984922:1:exon

XP_027386564.1
type: Protein
SIO_000068: ncbiprotein

position:3927123:1
position: 3927123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3984922:1
position: 3984922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3927123-3928163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3965272-3965367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3966909-3967031:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3967967-3968077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3969516-3969675:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3972320-3972465:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3979532-3979670:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3981012-3981315:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3983108-3983270:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3984857-3984922:1:exon

TRIM67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TRIM67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 67 isoform X2
translation: MEEELKCPVCGSLFREPIILPCSHNVCLPCARTIAVQTPDGEQHLPPPLLHSRGSALSSGAAAAPPLDQEAAAGPACSGAGGSAAGGLGGGAGGGSDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLSSSSSSITCPQCHRSASLDHRGLRGFQRNRLLEAIVQRYQQGRGAAPGASAATAVAICQLCDRTPPEPAATLCEQCDVLYCAACQLKCHPSRGPFAKHRLVQPPPPPAPSEVASGSPGAVQGAPSGSGGCKSPGATGAGAAGGNTARKYPTCPEHEMENYSMYCLSCRTPVCYLCLEEGRHGKHEVKPLGAMWKQHKAQLSQALNGVSDKAKEAKEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALTRQKAKLLTKVTKEREHKLKMVWDQINHCTLKLRQSTGLMEYCLEVIKENDPAGFLQISDALIKRVQVSQEQWVKGALEPKVSAEFELTLDSEPLLQAIHQLDFIQMKLPPVPLLQLEKCCTRNNSVTLAWRTPPFTHSPVDGYILELDDGDGGQFREVYVGKETLCTIDGLHFNSTYNARVKAFNSSGVGPYSKTVVLQTSDVAWFTFDPNSGHRDIILSNDNQTATCSSYDDRVVLGTAAFSKGAHYWELHVDRYDNHPDPAFGVARASVVKDMMLGKDDKAWAMYVDNNRSWFMHCNSHTNRTEGGVCKGATVGVLLDLNKHTLTFFINGQQQGPTAFSHVDGVFMPALSLNRNVQVTLHTGLEVPTNLGRPKLSGN
SIO_010081: TRIM67
subclass of: SO_0000673
so part of: TRIM67
location: join(3927123..3928163,3965272..3965367,3966909..3967031,3967967..3968077,3969516..3969669,3972320..3972465,3979532..3979670,3981012..3981315,3983108..3983270,3984857..3984922)
location: region:3927123-3984922:1
so has part: feature:3927123-3928163:1:exon
so has part: feature:3965272-3965367:1:exon
so has part: feature:3966909-3967031:1:exon
so has part: feature:3967967-3968077:1:exon
so has part: feature:3969516-3969669:1:exon
so has part: feature:3972320-3972465:1:exon
so has part: feature:3979532-3979670:1:exon
so has part: feature:3981012-3981315:1:exon
so has part: feature:3983108-3983270:1:exon
so has part: feature:3984857-3984922:1:exon

XP_027386565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3927123-3928163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3965272-3965367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3966909-3967031:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3967967-3968077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3969516-3969669:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3972320-3972465:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3979532-3979670:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3981012-3981315:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3983108-3983270:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3984857-3984922:1:exon

C28H1orf131
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: C28H1orf131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3993606..4026284)
location: region:3993606-4026284:-1
so has part: feature:3993606-4026284:-1:exon
subclass of: SO_0000010

113885597
type: Gene
SIO_000068: ncbigene

position:3993606:-1
position: 3993606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4026284:-1
position: 4026284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3993606-4026284:-1:exon

C28H1orf131
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: C28H1orf131
product: chromosome 28 C1orf131 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 26 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 171 samples with support for all annotated introns
transcript id: XM_027531128.1
SIO_010081: C28H1orf131
subclass of: SO_0000673
so part of: C28H1orf131
location: complement(join(3993606..3994477,3995690..3995742,3996326..3996412,3996542..3996637,4006113..4006178,4021241..4021584,4026126..4026284))
location: region:3993606-4026284:-1
so has part: feature:4026126-4026284:-1:exon
so has part: feature:4021241-4021584:-1:exon
so has part: feature:4006113-4006178:-1:exon
so has part: feature:3996542-3996637:-1:exon
so has part: feature:3996326-3996412:-1:exon
so has part: feature:3995690-3995742:-1:exon
so has part: feature:3993606-3994477:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4026126-4026284:-1:exon

position:4026126:-1
position: 4026126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4021241-4021584:-1:exon

position:4021241:-1
position: 4021241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4021584:-1
position: 4021584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4006113-4006178:-1:exon

position:4006113:-1
position: 4006113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4006178:-1
position: 4006178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3996542-3996637:-1:exon

position:3996542:-1
position: 3996542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3996637:-1
position: 3996637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3996326-3996412:-1:exon

position:3996326:-1
position: 3996326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3996412:-1
position: 3996412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3995690-3995742:-1:exon

position:3995690:-1
position: 3995690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3995742:-1
position: 3995742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3993606-3994477:-1:exon

position:3994477:-1
position: 3994477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C28H1orf131
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: C28H1orf131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf131 homolog
translation: MAQETRLAISGPPGSQALLDSLLQNLYDFGETEDETEEKRVRKKREKKRGTGTLASLATEPAPQPESLVRGQRKNAASFFQELQEELQGAPAVTPNGSPVGPVVSGAAAACSPPRNDRELVEVVQFHSRSKKRKQKPDQDENTKTKTKDQNHLDKDVDIQEFNLEKARLEVHRFGITGYGKGKERVLERERAIMLGARPPKNSYVNYKVLQEHIKEKKAAKEEEKRMAKDTDIFKKKKRKGQEDRKSKKKSAPSILSSGRIGQVGKFKNGTLILSQVDIKKINSSRVAK
SIO_010081: C28H1orf131
subclass of: SO_0000673
so part of: C28H1orf131
location: complement(join(3994342..3994477,3995690..3995742,3996326..3996412,3996542..3996637,4006113..4006178,4021241..4021584,4026126..4026213))
location: region:3994342-4026213:-1
so has part: feature:4026126-4026213:-1:exon
so has part: feature:4021241-4021584:-1:exon
so has part: feature:4006113-4006178:-1:exon
so has part: feature:3996542-3996637:-1:exon
so has part: feature:3996326-3996412:-1:exon
so has part: feature:3995690-3995742:-1:exon
so has part: feature:3994342-3994477:-1:exon

XP_027386929.1
type: Protein
SIO_000068: ncbiprotein

position:3994342:-1
position: 3994342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4026213:-1
position: 4026213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4026126-4026213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4021241-4021584:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4006113-4006178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3996542-3996637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3996326-3996412:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3995690-3995742:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3994342-3994477:-1:exon

GNPAT
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: GNPAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4026320..4066970
location: region:4026320-4066970:1
so has part: feature:4026320-4066970:1:exon
subclass of: SO_0000010

113885596
type: Gene
SIO_000068: ncbigene

position:4026320:1
position: 4026320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4066970:1
position: 4066970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4026320-4066970:1:exon

GNPAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: GNPAT
product: glyceronephosphate O-acyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 47 ESTs, 5 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 205 samples with support for all annotated introns
transcript id: XM_027531126.1
SIO_010081: GNPAT
subclass of: SO_0000673
so part of: GNPAT
location: join(4026320..4026562,4038049..4038231,4045903..4046079,4048244..4048373,4051931..4052058,4052370..4052445,4052713..4052864,4052983..4053113,4054518..4054741,4057958..4058200,4060000..4060079,4060951..4061091,4061359..4061458,4061542..4061635,4062244..4062305,4066668..4066970)
location: region:4026320-4066970:1
so has part: feature:4026320-4026562:1:exon
so has part: feature:4038049-4038231:1:exon
so has part: feature:4045903-4046079:1:exon
so has part: feature:4048244-4048373:1:exon
so has part: feature:4051931-4052058:1:exon
so has part: feature:4052370-4052445:1:exon
so has part: feature:4052713-4052864:1:exon
so has part: feature:4052983-4053113:1:exon
so has part: feature:4054518-4054741:1:exon
so has part: feature:4057958-4058200:1:exon
so has part: feature:4060000-4060079:1:exon
so has part: feature:4060951-4061091:1:exon
so has part: feature:4061359-4061458:1:exon
so has part: feature:4061542-4061635:1:exon
so has part: feature:4062244-4062305:1:exon
so has part: feature:4066668-4066970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4026320-4026562:1:exon

position:4026562:1
position: 4026562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4038049-4038231:1:exon

position:4038049:1
position: 4038049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4038231:1
position: 4038231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4045903-4046079:1:exon

position:4045903:1
position: 4045903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4046079:1
position: 4046079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4048244-4048373:1:exon

position:4048244:1
position: 4048244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4048373:1
position: 4048373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4051931-4052058:1:exon

position:4051931:1
position: 4051931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4052058:1
position: 4052058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4052370-4052445:1:exon

position:4052370:1
position: 4052370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4052445:1
position: 4052445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4052713-4052864:1:exon

position:4052713:1
position: 4052713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4052864:1
position: 4052864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4052983-4053113:1:exon

position:4052983:1
position: 4052983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4053113:1
position: 4053113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4054518-4054741:1:exon

position:4054518:1
position: 4054518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4054741:1
position: 4054741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4057958-4058200:1:exon

position:4057958:1
position: 4057958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4058200:1
position: 4058200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4060000-4060079:1:exon

position:4060000:1
position: 4060000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4060079:1
position: 4060079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4060951-4061091:1:exon

position:4060951:1
position: 4060951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4061091:1
position: 4061091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4061359-4061458:1:exon

position:4061359:1
position: 4061359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4061458:1
position: 4061458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4061542-4061635:1:exon

position:4061542:1
position: 4061542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4061635:1
position: 4061635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4062244-4062305:1:exon

position:4062244:1
position: 4062244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4062305:1
position: 4062305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4066668-4066970:1:exon

position:4066668:1
position: 4066668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNPAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: GNPAT
product: glyceronephosphate O-acyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_027531127.1
SIO_010081: GNPAT
subclass of: SO_0000673
so part of: GNPAT
location: join(4026432..4026562,4045903..4046079,4048244..4048373,4051931..4052058,4052370..4052445,4052713..4052864,4052983..4053113,4054518..4054741,4057958..4058200,4060000..4060079,4060951..4061091,4061359..4061458,4061542..4061635,4062244..4062305,4066668..4066970)
location: region:4026432-4066970:1
so has part: feature:4026432-4026562:1:exon
so has part: feature:4045903-4046079:1:exon
so has part: feature:4048244-4048373:1:exon
so has part: feature:4051931-4052058:1:exon
so has part: feature:4052370-4052445:1:exon
so has part: feature:4052713-4052864:1:exon
so has part: feature:4052983-4053113:1:exon
so has part: feature:4054518-4054741:1:exon
so has part: feature:4057958-4058200:1:exon
so has part: feature:4060000-4060079:1:exon
so has part: feature:4060951-4061091:1:exon
so has part: feature:4061359-4061458:1:exon
so has part: feature:4061542-4061635:1:exon
so has part: feature:4062244-4062305:1:exon
so has part: feature:4066668-4066970:1:exon

position:4026432:1
position: 4026432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4026432-4026562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4045903-4046079:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4048244-4048373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4051931-4052058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4052370-4052445:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4052713-4052864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4052983-4053113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4054518-4054741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4057958-4058200:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4060000-4060079:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4060951-4061091:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4061359-4061458:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4061542-4061635:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4062244-4062305:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4066668-4066970:1:exon

GNPAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: GNPAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroxyacetone phosphate acyltransferase isoform X1
translation: MDHSSSSNSCFSVGSTSPGAVVLLYSKELKKWDEFEDVLEERRHVSDLKFAMKCYTPLVYKGITPCKPSDIKCSVLNSEEIHYVIKQLSKESLQPVEVLREEACEILDEMSHKLRLGAIRFFAFALSKIFKQIFSKVRVNEEGIQKLQRAIQEHPVVLLPSHRSYIDFLMLSFLLYNYDLPVPVIAAGMDFLGMKMVGELLRMSGAFFMRRTFGGNKLYWAVFSEYVKTMLRNGYAPVEFFLEGTRSRSAKTLTPKFGLLNIVMEPFFKREVFDTYLVPISISYDRILEETLYAYELLGVPKPKESTTGLLKARRILSEKFGNIHVYFGDPVSLRSLAAGRMGRSPYNLVPRYIPQKQSEEMHTFVTEVAYKMQLLQIQNLVLSPWPLIVAVLLQNRPSMDFDALLEKTLWLKGLTQAFGGFLTWPDNEPAEAVIQSSILLHSNIVSLVKDRVILKMECGDSELVDGLIFQHITLLMCLAYRNQLLNVFVRPSLVAMALQMTPGFRKEDVYSCFRFLCSVFSDEFIFLPGNALKDFEEGCYLLCKSEAIQVMTRDILVTEKGNSVLEFLIGLFKPFVESYQIICKYLLNEEEDYFTEKQYFIRVRKFTSQLLDQGASQCYDVLSSDVQKNALAAFVRLGVVEKKKVNNDYIFNVNEPATTKLEEMLGCKTPVGKPATAKL
SIO_010081: GNPAT
subclass of: SO_0000673
so part of: GNPAT
location: join(4026485..4026562,4038049..4038231,4045903..4046079,4048244..4048373,4051931..4052058,4052370..4052445,4052713..4052864,4052983..4053113,4054518..4054741,4057958..4058200,4060000..4060079,4060951..4061091,4061359..4061458,4061542..4061635,4062244..4062305,4066668..4066711)
location: region:4026485-4066711:1
so has part: feature:4026485-4026562:1:exon
so has part: feature:4038049-4038231:1:exon
so has part: feature:4045903-4046079:1:exon
so has part: feature:4048244-4048373:1:exon
so has part: feature:4051931-4052058:1:exon
so has part: feature:4052370-4052445:1:exon
so has part: feature:4052713-4052864:1:exon
so has part: feature:4052983-4053113:1:exon
so has part: feature:4054518-4054741:1:exon
so has part: feature:4057958-4058200:1:exon
so has part: feature:4060000-4060079:1:exon
so has part: feature:4060951-4061091:1:exon
so has part: feature:4061359-4061458:1:exon
so has part: feature:4061542-4061635:1:exon
so has part: feature:4062244-4062305:1:exon
so has part: feature:4066668-4066711:1:exon

XP_027386927.1
type: Protein
SIO_000068: ncbiprotein

position:4026485:1
position: 4026485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4066711:1
position: 4066711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4026485-4026562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4038049-4038231:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4045903-4046079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4048244-4048373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4051931-4052058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4052370-4052445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4052713-4052864:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4052983-4053113:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4054518-4054741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4057958-4058200:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4060000-4060079:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4060951-4061091:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4061359-4061458:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4061542-4061635:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4062244-4062305:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4066668-4066711:1:exon

GNPAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: GNPAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroxyacetone phosphate acyltransferase isoform X2
translation: MDHSSSSNSCFSVGSTSPGAVVLLYSLSKESLQPVEVLREEACEILDEMSHKLRLGAIRFFAFALSKIFKQIFSKVRVNEEGIQKLQRAIQEHPVVLLPSHRSYIDFLMLSFLLYNYDLPVPVIAAGMDFLGMKMVGELLRMSGAFFMRRTFGGNKLYWAVFSEYVKTMLRNGYAPVEFFLEGTRSRSAKTLTPKFGLLNIVMEPFFKREVFDTYLVPISISYDRILEETLYAYELLGVPKPKESTTGLLKARRILSEKFGNIHVYFGDPVSLRSLAAGRMGRSPYNLVPRYIPQKQSEEMHTFVTEVAYKMQLLQIQNLVLSPWPLIVAVLLQNRPSMDFDALLEKTLWLKGLTQAFGGFLTWPDNEPAEAVIQSSILLHSNIVSLVKDRVILKMECGDSELVDGLIFQHITLLMCLAYRNQLLNVFVRPSLVAMALQMTPGFRKEDVYSCFRFLCSVFSDEFIFLPGNALKDFEEGCYLLCKSEAIQVMTRDILVTEKGNSVLEFLIGLFKPFVESYQIICKYLLNEEEDYFTEKQYFIRVRKFTSQLLDQGASQCYDVLSSDVQKNALAAFVRLGVVEKKKVNNDYIFNVNEPATTKLEEMLGCKTPVGKPATAKL
SIO_010081: GNPAT
subclass of: SO_0000673
so part of: GNPAT
location: join(4026485..4026562,4045903..4046079,4048244..4048373,4051931..4052058,4052370..4052445,4052713..4052864,4052983..4053113,4054518..4054741,4057958..4058200,4060000..4060079,4060951..4061091,4061359..4061458,4061542..4061635,4062244..4062305,4066668..4066711)
location: region:4026485-4066711:1
so has part: feature:4026485-4026562:1:exon
so has part: feature:4045903-4046079:1:exon
so has part: feature:4048244-4048373:1:exon
so has part: feature:4051931-4052058:1:exon
so has part: feature:4052370-4052445:1:exon
so has part: feature:4052713-4052864:1:exon
so has part: feature:4052983-4053113:1:exon
so has part: feature:4054518-4054741:1:exon
so has part: feature:4057958-4058200:1:exon
so has part: feature:4060000-4060079:1:exon
so has part: feature:4060951-4061091:1:exon
so has part: feature:4061359-4061458:1:exon
so has part: feature:4061542-4061635:1:exon
so has part: feature:4062244-4062305:1:exon
so has part: feature:4066668-4066711:1:exon

XP_027386928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4026485-4026562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4045903-4046079:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4048244-4048373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4051931-4052058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4052370-4052445:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4052713-4052864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4052983-4053113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4054518-4054741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4057958-4058200:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4060000-4060079:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4060951-4061091:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4061359-4061458:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4061542-4061635:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4062244-4062305:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4066668-4066711:1:exon

EXOC8
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: EXOC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4081897..4086516)
location: region:4081897-4086516:-1
so has part: feature:4081897-4086516:-1:exon
subclass of: SO_0000010

113885528
type: Gene
SIO_000068: ncbigene

position:4081897:-1
position: 4081897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4086516:-1
position: 4086516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4081897-4086516:-1:exon

EXOC8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: EXOC8
product: exocyst complex component 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 27 ESTs, 3 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027530930.1
SIO_010081: EXOC8
subclass of: SO_0000673
so part of: EXOC8
location: complement(4081897..4086516)
location: region:4081897-4086516:-1
so has part: feature:4081897-4086516:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4081897-4086516:-1:exon

EXOC8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: EXOC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exocyst complex component 8
translation: MAMAMSDSGASRLRRQLESGGFEARLYVKQLSQQSDGDRDLQEHRQRIQALAEETAQNLKRNVYQNYRQFIETAREISYLESEMYQLSHLLTEQKSSLESIPLTLLPAAAAAGAAAASGGEEGGGGAGGRDQLRGQTGFFPSPGGASRDGSGPGEEGKQRTLTTLLEKVEGCRHLLETPGQYLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDGLAVVNVKDNPPMKDMFKLLMFPESRIFQAENAKIKREWLEVLEETKRALSEKRRREQEEAAAPRGPPQVTPKASNPFEDEDDDEPTVPEIEEEKVDLSMEWIQELPEDLDVCIAQRDFEGAVDLLDKLNHYLEDKPSPPPVKELRARVDERVRQLTEVLVFELSPDRSLRGGPKATRRAVSQLIRLGQCTKACELFLRNRAAAVHTAIRQLRIEGATLLYIHKLCHVFFTSLLETAREFETDFAGTDSGCYSAFVVWARSAMGMFVDAFSKQVFDSKESLSTAAECVRVAKEHCQQLGDIGLDLTFIVHALLVKDIQGALHSYKEIIIEATKHRNSEEMWRRMNLMTPEALGKLKEEMKSCGVSNFEQYTGDDCWVNLSYTVVAFTKQTMGFLEEALKLYFPELHMVLLESLVEIILVAVQHVDYSLRCEQDPEKKAFIRQNASFLYETVLPVVEKRFEEGVGKPAKQLQDLRNASRLIRVNPESTTSVV
SIO_010081: EXOC8
subclass of: SO_0000673
so part of: EXOC8
location: complement(4084191..4086368)
location: region:4084191-4086368:-1
so has part: feature:4084191-4086368:-1:exon

XP_027386731.1
type: Protein
SIO_000068: ncbiprotein

position:4084191:-1
position: 4084191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4086368:-1
position: 4086368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4084191-4086368:-1:exon

SPRTN
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: SPRTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4086575..4099625
location: region:4086575-4099625:1
so has part: feature:4086575-4099625:1:exon
subclass of: SO_0000010

113885529
type: Gene
SIO_000068: ncbigene

position:4086575:1
position: 4086575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4099625:1
position: 4099625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4086575-4099625:1:exon

SPRTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SPRTN
product: SprT-like N-terminal domain, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs, 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 181 samples with support for all annotated introns
transcript id: XM_027530936.1
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(4086575..4087725,4088412..4088511,4092515..4092643,4095930..4096197,4097349..4099618)
location: region:4086575-4099618:1
so has part: feature:4086575-4087725:1:exon
so has part: feature:4088412-4088511:1:exon
so has part: feature:4092515-4092643:1:exon
so has part: feature:4095930-4096197:1:exon
so has part: feature:4097349-4099618:1:exon

position:4099618:1
position: 4099618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4086575-4087725:1:exon

position:4087725:1
position: 4087725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4088412-4088511:1:exon

position:4088412:1
position: 4088412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4088511:1
position: 4088511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4092515-4092643:1:exon

position:4092515:1
position: 4092515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4092643:1
position: 4092643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4095930-4096197:1:exon

position:4095930:1
position: 4095930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4096197:1
position: 4096197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4097349-4099618:1:exon

position:4097349:1
position: 4097349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPRTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SPRTN
product: SprT-like N-terminal domain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 199 samples with support for all annotated introns
transcript id: XM_027530932.1
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(4086591..4087183,4088412..4088511,4092515..4092643,4095930..4096197,4097349..4099625)
location: region:4086591-4099625:1
so has part: feature:4086591-4087183:1:exon
so has part: feature:4088412-4088511:1:exon
so has part: feature:4092515-4092643:1:exon
so has part: feature:4095930-4096197:1:exon
so has part: feature:4097349-4099625:1:exon

position:4086591:1
position: 4086591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4086591-4087183:1:exon

position:4087183:1
position: 4087183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4088412-4088511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4092515-4092643:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4095930-4096197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097349-4099625:1:exon

SPRTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SPRTN
product: SprT-like N-terminal domain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 56 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 193 samples with support for all annotated introns
transcript id: XM_027530931.1
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(4086608..4086718,4086789..4087183,4088412..4088511,4092515..4092643,4095930..4096197,4097349..4099625)
location: region:4086608-4099625:1
so has part: feature:4086608-4086718:1:exon
so has part: feature:4086789-4087183:1:exon
so has part: feature:4088412-4088511:1:exon
so has part: feature:4092515-4092643:1:exon
so has part: feature:4095930-4096197:1:exon
so has part: feature:4097349-4099625:1:exon

position:4086608:1
position: 4086608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4086608-4086718:1:exon

position:4086718:1
position: 4086718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4086789-4087183:1:exon

position:4086789:1
position: 4086789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4088412-4088511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4092515-4092643:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4095930-4096197:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4097349-4099625:1:exon

SPRTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SPRTN
product: SprT-like N-terminal domain, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 178 samples with support for all annotated introns
transcript id: XM_027530935.1
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(4086611..4086718,4086789..4087725,4088412..4088511,4092515..4092643,4095930..4096197,4097349..4098260)
location: region:4086611-4098260:1
so has part: feature:4086611-4086718:1:exon
so has part: feature:4086789-4087725:1:exon
so has part: feature:4088412-4088511:1:exon
so has part: feature:4092515-4092643:1:exon
so has part: feature:4095930-4096197:1:exon
so has part: feature:4097349-4098260:1:exon

position:4086611:1
position: 4086611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4098260:1
position: 4098260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4086611-4086718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4086789-4087725:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4088412-4088511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4092515-4092643:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4095930-4096197:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4097349-4098260:1:exon

SPRTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SPRTN
product: SprT-like N-terminal domain, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_027530933.1
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(4086617..4086635,4086789..4087183,4088412..4088511,4092515..4092643,4095930..4096197,4097349..4099625)
location: region:4086617-4099625:1
so has part: feature:4086617-4086635:1:exon
so has part: feature:4086789-4087183:1:exon
so has part: feature:4088412-4088511:1:exon
so has part: feature:4092515-4092643:1:exon
so has part: feature:4095930-4096197:1:exon
so has part: feature:4097349-4099625:1:exon

position:4086617:1
position: 4086617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4086617-4086635:1:exon

position:4086635:1
position: 4086635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4086789-4087183:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4088412-4088511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4092515-4092643:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4095930-4096197:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4097349-4099625:1:exon

SPRTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SPRTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sprT-like domain-containing protein Spartan isoform X1
translation: MDEDLVLALQLQEEWNLQVSEREPAQEPLSLVDASWELVDPTPDLQGLFVLFNDRFFWGQLEAVEVKWSVRMTLCAGICSYEGRGGMCSIRLSEPLLKLRPRKDLVETLLHEMIHAYLFVTNNDKDREGHGPEFCKHMHRINRLTGANITVYHTFHDEVDEYRRHWWRCNGPCQNSKPYYGYVKRATNRAPSAHDYWWAEHQKTCGGTYIKIKEPENYSKKGKGKTKLRKQPVSEAENKDKPNRGEKQLLIPFTGKGYVLGETSNFSSGKCITSHAINESQEPLSQDHSANALRPHSKTEVKFEQNGPSKKTSVASPVLSTSHQNVLSNYFSKVSVASSKAFRSVSGSPVKTVGDSTTKSVSAGSQRRVTSSRTSLRNSLKAMESTSVTVPQDAGGPEGKLPSKRPRIEDKTFFDLFFIKKEQAQSGGGDVTSSSHPPAAAQSPSGASGQSRVVHCPVCQDEVSETQINEHLDWCLERDSTQVKS
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(4086963..4087183,4088412..4088511,4092515..4092643,4095930..4096197,4097349..4098088)
location: region:4086963-4098088:1
so has part: feature:4086963-4087183:1:exon
so has part: feature:4088412-4088511:1:exon
so has part: feature:4092515-4092643:1:exon
so has part: feature:4095930-4096197:1:exon
so has part: feature:4097349-4098088:1:exon

XP_027386732.1
type: Protein
SIO_000068: ncbiprotein

position:4086963:1
position: 4086963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4098088:1
position: 4098088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4086963-4087183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4088412-4088511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4092515-4092643:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4095930-4096197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097349-4098088:1:exon

SPRTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SPRTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sprT-like domain-containing protein Spartan isoform X1
translation: MDEDLVLALQLQEEWNLQVSEREPAQEPLSLVDASWELVDPTPDLQGLFVLFNDRFFWGQLEAVEVKWSVRMTLCAGICSYEGRGGMCSIRLSEPLLKLRPRKDLVETLLHEMIHAYLFVTNNDKDREGHGPEFCKHMHRINRLTGANITVYHTFHDEVDEYRRHWWRCNGPCQNSKPYYGYVKRATNRAPSAHDYWWAEHQKTCGGTYIKIKEPENYSKKGKGKTKLRKQPVSEAENKDKPNRGEKQLLIPFTGKGYVLGETSNFSSGKCITSHAINESQEPLSQDHSANALRPHSKTEVKFEQNGPSKKTSVASPVLSTSHQNVLSNYFSKVSVASSKAFRSVSGSPVKTVGDSTTKSVSAGSQRRVTSSRTSLRNSLKAMESTSVTVPQDAGGPEGKLPSKRPRIEDKTFFDLFFIKKEQAQSGGGDVTSSSHPPAAAQSPSGASGQSRVVHCPVCQDEVSETQINEHLDWCLERDSTQVKS
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(4086963..4087183,4088412..4088511,4092515..4092643,4095930..4096197,4097349..4098088)
location: region:4086963-4098088:1
so has part: feature:4086963-4087183:1:exon
so has part: feature:4088412-4088511:1:exon
so has part: feature:4092515-4092643:1:exon
so has part: feature:4095930-4096197:1:exon
so has part: feature:4097349-4098088:1:exon

XP_027386733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4086963-4087183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4088412-4088511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4092515-4092643:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4095930-4096197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097349-4098088:1:exon

SPRTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SPRTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sprT-like domain-containing protein Spartan isoform X1
translation: MDEDLVLALQLQEEWNLQVSEREPAQEPLSLVDASWELVDPTPDLQGLFVLFNDRFFWGQLEAVEVKWSVRMTLCAGICSYEGRGGMCSIRLSEPLLKLRPRKDLVETLLHEMIHAYLFVTNNDKDREGHGPEFCKHMHRINRLTGANITVYHTFHDEVDEYRRHWWRCNGPCQNSKPYYGYVKRATNRAPSAHDYWWAEHQKTCGGTYIKIKEPENYSKKGKGKTKLRKQPVSEAENKDKPNRGEKQLLIPFTGKGYVLGETSNFSSGKCITSHAINESQEPLSQDHSANALRPHSKTEVKFEQNGPSKKTSVASPVLSTSHQNVLSNYFSKVSVASSKAFRSVSGSPVKTVGDSTTKSVSAGSQRRVTSSRTSLRNSLKAMESTSVTVPQDAGGPEGKLPSKRPRIEDKTFFDLFFIKKEQAQSGGGDVTSSSHPPAAAQSPSGASGQSRVVHCPVCQDEVSETQINEHLDWCLERDSTQVKS
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(4086963..4087183,4088412..4088511,4092515..4092643,4095930..4096197,4097349..4098088)
location: region:4086963-4098088:1
so has part: feature:4086963-4087183:1:exon
so has part: feature:4088412-4088511:1:exon
so has part: feature:4092515-4092643:1:exon
so has part: feature:4095930-4096197:1:exon
so has part: feature:4097349-4098088:1:exon

XP_027386734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4086963-4087183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4088412-4088511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4092515-4092643:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4095930-4096197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097349-4098088:1:exon

SPRTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SPRTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sprT-like domain-containing protein Spartan isoform X3
translation: MCSIRLSEPLLKLRPRKDLVETLLHEMIHAYLFVTNNDKDREGHGPEFCKHMHRINRLTGANITVYHTFHDEVDEYRRHWWRCNGPCQNSKPYYGYVKRATNRAPSAHDYWWAEHQKTCGGTYIKIKEPENYSKKGKGKTKLRKQPVSEAENKDKPNRGEKQLLIPFTGKGYVLGETSNFSSGKCITSHAINESQEPLSQDHSANALRPHSKTEVKFEQNGPSKKTSVASPVLSTSHQNVLSNYFSKVSVASSKAFRSVSGSPVKTVGDSTTKSVSAGSQRRVTSSRTSLRNSLKAMESTSVTVPQDAGGPEGKLPSKRPRIEDKTFFDLFFIKKEQAQSGGGDVTSSSHPPAAAQSPSGASGQSRVVHCPVCQDEVSETQINEHLDWCLERDSTQVKS
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(4088449..4088511,4092515..4092643,4095930..4096197,4097349..4098088)
location: region:4088449-4098088:1
so has part: feature:4088449-4088511:1:exon
so has part: feature:4092515-4092643:1:exon
so has part: feature:4095930-4096197:1:exon
so has part: feature:4097349-4098088:1:exon

XP_027386736.1
type: Protein
SIO_000068: ncbiprotein

position:4088449:1
position: 4088449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4088449-4088511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4092515-4092643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4095930-4096197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4097349-4098088:1:exon

SPRTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SPRTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sprT-like domain-containing protein Spartan isoform X3
translation: MCSIRLSEPLLKLRPRKDLVETLLHEMIHAYLFVTNNDKDREGHGPEFCKHMHRINRLTGANITVYHTFHDEVDEYRRHWWRCNGPCQNSKPYYGYVKRATNRAPSAHDYWWAEHQKTCGGTYIKIKEPENYSKKGKGKTKLRKQPVSEAENKDKPNRGEKQLLIPFTGKGYVLGETSNFSSGKCITSHAINESQEPLSQDHSANALRPHSKTEVKFEQNGPSKKTSVASPVLSTSHQNVLSNYFSKVSVASSKAFRSVSGSPVKTVGDSTTKSVSAGSQRRVTSSRTSLRNSLKAMESTSVTVPQDAGGPEGKLPSKRPRIEDKTFFDLFFIKKEQAQSGGGDVTSSSHPPAAAQSPSGASGQSRVVHCPVCQDEVSETQINEHLDWCLERDSTQVKS
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(4088449..4088511,4092515..4092643,4095930..4096197,4097349..4098088)
location: region:4088449-4098088:1
so has part: feature:4088449-4088511:1:exon
so has part: feature:4092515-4092643:1:exon
so has part: feature:4095930-4096197:1:exon
so has part: feature:4097349-4098088:1:exon

XP_027386737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4088449-4088511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4092515-4092643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4095930-4096197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4097349-4098088:1:exon

SPRTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SPRTN
product: SprT-like N-terminal domain, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_027530934.1
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(4088518..4088692,4092515..4092643,4095930..4096197,4097349..4099625)
location: region:4088518-4099625:1
so has part: feature:4088518-4088692:1:exon
so has part: feature:4092515-4092643:1:exon
so has part: feature:4095930-4096197:1:exon
so has part: feature:4097349-4099625:1:exon

position:4088518:1
position: 4088518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4088518-4088692:1:exon

position:4088692:1
position: 4088692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4092515-4092643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4095930-4096197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4097349-4099625:1:exon

SPRTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SPRTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sprT-like domain-containing protein Spartan isoform X2
translation: MWGENQFSLTANFYCGANNDYLIFLQCFKVGGFQTLLHEMIHAYLFVTNNDKDREGHGPEFCKHMHRINRLTGANITVYHTFHDEVDEYRRHWWRCNGPCQNSKPYYGYVKRATNRAPSAHDYWWAEHQKTCGGTYIKIKEPENYSKKGKGKTKLRKQPVSEAENKDKPNRGEKQLLIPFTGKGYVLGETSNFSSGKCITSHAINESQEPLSQDHSANALRPHSKTEVKFEQNGPSKKTSVASPVLSTSHQNVLSNYFSKVSVASSKAFRSVSGSPVKTVGDSTTKSVSAGSQRRVTSSRTSLRNSLKAMESTSVTVPQDAGGPEGKLPSKRPRIEDKTFFDLFFIKKEQAQSGGGDVTSSSHPPAAAQSPSGASGQSRVVHCPVCQDEVSETQINEHLDWCLERDSTQVKS
SIO_010081: SPRTN
subclass of: SO_0000673
so part of: SPRTN
location: join(4088591..4088692,4092515..4092643,4095930..4096197,4097349..4098088)
location: region:4088591-4098088:1
so has part: feature:4088591-4088692:1:exon
so has part: feature:4092515-4092643:1:exon
so has part: feature:4095930-4096197:1:exon
so has part: feature:4097349-4098088:1:exon

XP_027386735.1
type: Protein
SIO_000068: ncbiprotein

position:4088591:1
position: 4088591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4088591-4088692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4092515-4092643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4095930-4096197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4097349-4098088:1:exon

EGLN1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: EGLN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4108785..4171967)
location: region:4108785-4171967:-1
so has part: feature:4108785-4171967:-1:exon
subclass of: SO_0000010

113885593
type: Gene
SIO_000068: ncbigene

position:4108785:-1
position: 4108785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4171967:-1
position: 4171967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4108785-4171967:-1:exon

EGLN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: EGLN1
product: egl-9 family hypoxia inducible factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 123 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 155 samples with support for all annotated introns
transcript id: XM_027531122.1
SIO_010081: EGLN1
subclass of: SO_0000673
so part of: EGLN1
location: complement(join(4108785..4111328,4114976..4115112,4121018..4121137,4170700..4171967))
location: region:4108785-4171967:-1
so has part: feature:4170700-4171967:-1:exon
so has part: feature:4121018-4121137:-1:exon
so has part: feature:4114976-4115112:-1:exon
so has part: feature:4108785-4111328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4170700-4171967:-1:exon

position:4170700:-1
position: 4170700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4121018-4121137:-1:exon

position:4121018:-1
position: 4121018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4121137:-1
position: 4121137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4114976-4115112:-1:exon

position:4114976:-1
position: 4114976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4115112:-1
position: 4115112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4108785-4111328:-1:exon

position:4111328:-1
position: 4111328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EGLN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: EGLN1
product: egl-9 family hypoxia inducible factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 152 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 216 samples with support for all annotated introns
transcript id: XM_027531119.1
SIO_010081: EGLN1
subclass of: SO_0000673
so part of: EGLN1
location: complement(join(4108785..4111328,4112344..4112411,4114976..4115112,4121018..4121137,4170700..4171967))
location: region:4108785-4171967:-1
so has part: feature:4170700-4171967:-1:exon
so has part: feature:4121018-4121137:-1:exon
so has part: feature:4114976-4115112:-1:exon
so has part: feature:4112344-4112411:-1:exon
so has part: feature:4108785-4111328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4170700-4171967:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4121018-4121137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4114976-4115112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4112344-4112411:-1:exon

position:4112344:-1
position: 4112344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4112411:-1
position: 4112411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4108785-4111328:-1:exon

EGLN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: EGLN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: egl nine homolog 1 isoform X1
translation: MANDSGGPGGPSPSERDRQYCELCGKMENLLRCSRCRSSFYCSKEHQRQDWKKHKLVCQVGENVPAPGTGEQQQPGPAPLPRATGAREARKAAPRRDRAVETAGPRAPGDAAKAKAKAKPTADPAAAASPPRAAPGGQGRVAAAAEAEPAKEDLLSRSLLNTPGDGLSHGGGLRPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMNNMDDLIRHCNGKLGNYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGEKGVRVELNKPSDSISKDVL
SIO_010081: EGLN1
subclass of: SO_0000673
so part of: EGLN1
location: complement(join(4111264..4111328,4112344..4112411,4114976..4115112,4121018..4121137,4170700..4171572))
location: region:4111264-4171572:-1
so has part: feature:4170700-4171572:-1:exon
so has part: feature:4121018-4121137:-1:exon
so has part: feature:4114976-4115112:-1:exon
so has part: feature:4112344-4112411:-1:exon
so has part: feature:4111264-4111328:-1:exon

XP_027386920.1
type: Protein
SIO_000068: ncbiprotein

position:4111264:-1
position: 4111264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4171572:-1
position: 4171572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4170700-4171572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4121018-4121137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4114976-4115112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4112344-4112411:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4111264-4111328:-1:exon

EGLN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: EGLN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: egl nine homolog 1 isoform X2
translation: MANDSGGPGGPSPSERDRQYCELCGKMENLLRCSRCRSSFYCSKEHQRQDWKKHKLVCQVGENVPAPGTGEQQQPGPAPLPRATGAREARKAAPRRDRAVETAGPRAPGDAAKAKAKAKPTADPAAAASPPRAAPGGQGRVAAAAEAEPAKEDLLSRSLLNTPGDGLSHGGGLRPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMNNMDDLIRHCNGKLGNYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATR
SIO_010081: EGLN1
subclass of: SO_0000673
so part of: EGLN1
location: complement(join(4111325..4111328,4114976..4115112,4121018..4121137,4170700..4171572))
location: region:4111325-4171572:-1
so has part: feature:4170700-4171572:-1:exon
so has part: feature:4121018-4121137:-1:exon
so has part: feature:4114976-4115112:-1:exon
so has part: feature:4111325-4111328:-1:exon

XP_027386923.1
type: Protein
SIO_000068: ncbiprotein

position:4111325:-1
position: 4111325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4170700-4171572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4121018-4121137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4114976-4115112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4111325-4111328:-1:exon

LOC113885439
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885439
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4256191..4257443
location: region:4256191-4257443:1
so has part: feature:4256191-4257443:1:exon

113885439
type: Gene
SIO_000068: ncbigene

position:4256191:1
position: 4256191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4257443:1
position: 4257443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4256191-4257443:1:exon

LOC113885439
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: LOC113885439
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 131 ESTs, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_003509206.1
SIO_010081: LOC113885439
so part of: LOC113885439
location: 4256191..4257443
location: region:4256191-4257443:1
so has part: feature:4256191-4257443:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4256191-4257443:1:exon

LOC113885431
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885431
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4277966..4280191)
location: region:4277966-4280191:-1
so has part: feature:4277966-4280191:-1:exon

113885431
type: Gene
SIO_000068: ncbigene

position:4277966:-1
position: 4277966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4280191:-1
position: 4280191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4277966-4280191:-1:exon

LOC113885431
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885431
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 364 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113885431
subclass of: SO_0000673
so part of: LOC113885431
location: complement(4277966..4280191)
location: region:4277966-4280191:-1
so has part: feature:4277966-4280191:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4277966-4280191:-1:exon

TSNAX
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TSNAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4352338..4389363
location: region:4352338-4389363:1
so has part: feature:4352338-4389363:1:exon
subclass of: SO_0000010

113885266
type: Gene
SIO_000068: ncbigene

position:4352338:1
position: 4352338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4389363:1
position: 4389363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4352338-4389363:1:exon

TSNAX
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: TSNAX
product: translin associated factor X, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 193 samples with support for all annotated introns
transcript id: XR_003509167.1
SIO_010081: TSNAX
so part of: TSNAX
location: join(4352338..4352500,4352939..4353043,4356133..4356247,4362617..4362747,4383790..4386633,4387529..4389363)
location: region:4352338-4389363:1
so has part: feature:4352338-4352500:1:exon
so has part: feature:4352939-4353043:1:exon
so has part: feature:4356133-4356247:1:exon
so has part: feature:4362617-4362747:1:exon
so has part: feature:4383790-4386633:1:exon
so has part: feature:4387529-4389363:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4352338-4352500:1:exon

position:4352500:1
position: 4352500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4352939-4353043:1:exon

position:4352939:1
position: 4352939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4353043:1
position: 4353043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4356133-4356247:1:exon

position:4356133:1
position: 4356133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4356247:1
position: 4356247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4362617-4362747:1:exon

position:4362617:1
position: 4362617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4362747:1
position: 4362747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4383790-4386633:1:exon

position:4383790:1
position: 4383790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4386633:1
position: 4386633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4387529-4389363:1:exon

position:4387529:1
position: 4387529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSNAX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TSNAX
product: translin associated factor X, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 206 samples with support for all annotated introns
transcript id: XM_027530433.1
SIO_010081: TSNAX
subclass of: SO_0000673
so part of: TSNAX
location: join(4352354..4352500,4352939..4353043,4356133..4356247,4362617..4362747,4383790..4383917,4387529..4389363)
location: region:4352354-4389363:1
so has part: feature:4352354-4352500:1:exon
so has part: feature:4352939-4353043:1:exon
so has part: feature:4356133-4356247:1:exon
so has part: feature:4362617-4362747:1:exon
so has part: feature:4383790-4383917:1:exon
so has part: feature:4387529-4389363:1:exon

position:4352354:1
position: 4352354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4352354-4352500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4352939-4353043:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4356133-4356247:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4362617-4362747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4383790-4383917:1:exon

position:4383917:1
position: 4383917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4387529-4389363:1:exon

TSNAX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TSNAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translin-associated protein X isoform X2
translation: MSSKEGSGGFRKRKHDNFPHNQRREGKDVNSSSPVMLAFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEEILTESEVKLDGVRQKILQVAQELSVEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFSTEDNGKENKTPSSDAQDKQCGTWRLRITPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYALKVRGSEIPKHMLADVFSVKTEMIDQEEGIS
SIO_010081: TSNAX
subclass of: SO_0000673
so part of: TSNAX
location: join(4352485..4352500,4352939..4353043,4356133..4356247,4362617..4362747,4383790..4383917,4387529..4387906)
location: region:4352485-4387906:1
so has part: feature:4352485-4352500:1:exon
so has part: feature:4352939-4353043:1:exon
so has part: feature:4356133-4356247:1:exon
so has part: feature:4362617-4362747:1:exon
so has part: feature:4383790-4383917:1:exon
so has part: feature:4387529-4387906:1:exon

XP_027386234.1
type: Protein
SIO_000068: ncbiprotein

position:4352485:1
position: 4352485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4387906:1
position: 4387906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4352485-4352500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4352939-4353043:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4356133-4356247:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4362617-4362747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4383790-4383917:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4387529-4387906:1:exon

TSNAX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TSNAX
product: translin associated factor X, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_027530432.1
SIO_010081: TSNAX
subclass of: SO_0000673
so part of: TSNAX
location: join(4352536..4352623,4352939..4353043,4356133..4356247,4362617..4362747,4383790..4383917,4387529..4389363)
location: region:4352536-4389363:1
so has part: feature:4352536-4352623:1:exon
so has part: feature:4352939-4353043:1:exon
so has part: feature:4356133-4356247:1:exon
so has part: feature:4362617-4362747:1:exon
so has part: feature:4383790-4383917:1:exon
so has part: feature:4387529-4389363:1:exon

position:4352536:1
position: 4352536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4352536-4352623:1:exon

position:4352623:1
position: 4352623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4352939-4353043:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4356133-4356247:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4362617-4362747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4383790-4383917:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4387529-4389363:1:exon

TSNAX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TSNAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translin-associated protein X isoform X1
translation: MLSPRADSGGGGPGSGGFRKRKHDNFPHNQRREGKDVNSSSPVMLAFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEEILTESEVKLDGVRQKILQVAQELSVEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFSTEDNGKENKTPSSDAQDKQCGTWRLRITPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYALKVRGSEIPKHMLADVFSVKTEMIDQEEGIS
SIO_010081: TSNAX
subclass of: SO_0000673
so part of: TSNAX
location: join(4352584..4352623,4352939..4353043,4356133..4356247,4362617..4362747,4383790..4383917,4387529..4387906)
location: region:4352584-4387906:1
so has part: feature:4352584-4352623:1:exon
so has part: feature:4352939-4353043:1:exon
so has part: feature:4356133-4356247:1:exon
so has part: feature:4362617-4362747:1:exon
so has part: feature:4383790-4383917:1:exon
so has part: feature:4387529-4387906:1:exon

XP_027386233.1
type: Protein
SIO_000068: ncbiprotein

position:4352584:1
position: 4352584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4352584-4352623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4352939-4353043:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4356133-4356247:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4362617-4362747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4383790-4383917:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4387529-4387906:1:exon

LOC113885654
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885654
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4454827..4454900)
location: region:4454827-4454900:-1
so has part: feature:4454827-4454900:-1:exon
subclass of: SO_0000578

113885654
type: Gene
SIO_000068: ncbigene

position:4454827:-1
position: 4454827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4454900:-1
position: 4454900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4454827-4454900:-1:exon

LOC113885654
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: snoRNA
gene: LOC113885654
product: small nucleolar RNA SNORD65
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00571
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509304.1
SIO_010081: LOC113885654
subclass of: SO_0000673
so part of: LOC113885654
location: complement(4454827..4454900)
location: region:4454827-4454900:-1
so has part: feature:4454827-4454900:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4454827-4454900:-1:exon

DISC1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: DISC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4470018..4897058
location: region:4470018-4897058:1
so has part: feature:4470018-4897058:1:exon
subclass of: SO_0000010

113885284
type: Gene
SIO_000068: ncbigene

position:4470018:1
position: 4470018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4897058:1
position: 4897058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4470018-4897058:1:exon

DISC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: DISC1
product: DISC1 scaffold protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_027530484.1
SIO_010081: DISC1
subclass of: SO_0000673
so part of: DISC1
location: join(4470018..4470263,4553842..4554818,4567057..4567126,4614538..4614685,4629372..4629501,4633255..4633481,4680518..4680706,4805990..4806050)
location: region:4470018-4806050:1
so has part: feature:4470018-4470263:1:exon
so has part: feature:4553842-4554818:1:exon
so has part: feature:4567057-4567126:1:exon
so has part: feature:4614538-4614685:1:exon
so has part: feature:4629372-4629501:1:exon
so has part: feature:4633255-4633481:1:exon
so has part: feature:4680518-4680706:1:exon
so has part: feature:4805990-4806050:1:exon

position:4806050:1
position: 4806050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4470018-4470263:1:exon

position:4470263:1
position: 4470263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4553842-4554818:1:exon

position:4553842:1
position: 4553842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4554818:1
position: 4554818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4567057-4567126:1:exon

position:4567057:1
position: 4567057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4567126:1
position: 4567126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4614538-4614685:1:exon

position:4614538:1
position: 4614538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4614685:1
position: 4614685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4629372-4629501:1:exon

position:4629372:1
position: 4629372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4629501:1
position: 4629501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4633255-4633481:1:exon

position:4633255:1
position: 4633255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4633481:1
position: 4633481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4680518-4680706:1:exon

position:4680518:1
position: 4680518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4680706:1
position: 4680706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4805990-4806050:1:exon

position:4805990:1
position: 4805990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DISC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: DISC1
product: DISC1 scaffold protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_027530483.1
SIO_010081: DISC1
subclass of: SO_0000673
so part of: DISC1
location: join(4470022..4470263,4553842..4554818,4567057..4567126,4614538..4614685,4629372..4629501,4633255..4633481,4664000..4664054,4668414..4668516,4680518..4680706,4805990..4806050,4861715..4861988,4882837..4882954,4891332..4891489,4894766..4897058)
location: region:4470022-4897058:1
so has part: feature:4470022-4470263:1:exon
so has part: feature:4553842-4554818:1:exon
so has part: feature:4567057-4567126:1:exon
so has part: feature:4614538-4614685:1:exon
so has part: feature:4629372-4629501:1:exon
so has part: feature:4633255-4633481:1:exon
so has part: feature:4664000-4664054:1:exon
so has part: feature:4668414-4668516:1:exon
so has part: feature:4680518-4680706:1:exon
so has part: feature:4805990-4806050:1:exon
so has part: feature:4861715-4861988:1:exon
so has part: feature:4882837-4882954:1:exon
so has part: feature:4891332-4891489:1:exon
so has part: feature:4894766-4897058:1:exon

position:4470022:1
position: 4470022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4470022-4470263:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4553842-4554818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4567057-4567126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4614538-4614685:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4629372-4629501:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4633255-4633481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4664000-4664054:1:exon

position:4664000:1
position: 4664000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4664054:1
position: 4664054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4668414-4668516:1:exon

position:4668414:1
position: 4668414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4668516:1
position: 4668516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4680518-4680706:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4805990-4806050:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4861715-4861988:1:exon

position:4861715:1
position: 4861715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4861988:1
position: 4861988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4882837-4882954:1:exon

position:4882837:1
position: 4882837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4882954:1
position: 4882954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4891332-4891489:1:exon

position:4891332:1
position: 4891332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4891489:1
position: 4891489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4894766-4897058:1:exon

position:4894766:1
position: 4894766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DISC1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: DISC1
product: DISC1 scaffold protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_003509171.1
SIO_010081: DISC1
so part of: DISC1
location: join(4470022..4470263,4553842..4554818,4567057..4567126,4614538..4614685,4629372..4629501,4633255..4633481,4664000..4664054,4668414..4668516,4680518..4680706,4805990..4806050,4861715..4861988,4882837..4882954,4891332..4891489,4894766..4896174,4896225..4897058)
location: region:4470022-4897058:1
so has part: feature:4470022-4470263:1:exon
so has part: feature:4553842-4554818:1:exon
so has part: feature:4567057-4567126:1:exon
so has part: feature:4614538-4614685:1:exon
so has part: feature:4629372-4629501:1:exon
so has part: feature:4633255-4633481:1:exon
so has part: feature:4664000-4664054:1:exon
so has part: feature:4668414-4668516:1:exon
so has part: feature:4680518-4680706:1:exon
so has part: feature:4805990-4806050:1:exon
so has part: feature:4861715-4861988:1:exon
so has part: feature:4882837-4882954:1:exon
so has part: feature:4891332-4891489:1:exon
so has part: feature:4894766-4896174:1:exon
so has part: feature:4896225-4897058:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4470022-4470263:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4553842-4554818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4567057-4567126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4614538-4614685:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4629372-4629501:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4633255-4633481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4664000-4664054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4668414-4668516:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4680518-4680706:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4805990-4806050:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4861715-4861988:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4882837-4882954:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4891332-4891489:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4894766-4896174:1:exon

position:4896174:1
position: 4896174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4896225-4897058:1:exon

position:4896225:1
position: 4896225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DISC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: DISC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disrupted in schizophrenia 1 protein isoform X1
translation: MLGGGPQGAPASGGRGHRAGSQDCSPPAASFRRRRLARRPGYMRSAAGPRIGFLSPPVGAPFRAQGGACGKESHHLESRAGPCGLDPGGQWRGCSVGSLIPRSTATSALTVGHRGPALTAAKGSPGLLGSQPRAGTALPNRLSRLCGPRATGCRGELPSTDTREAPSPCREAWNKGCPSPEDMSDTSCSLGSGPQAPAIPASSQDVFTSSFSFIRLSLGSAGERGEAEGCPPSREAEGPHQSLEEMEAKAASSGGPHDHPRLLSLPFTLKATQGLADATQTSGGSRGLECQTLPLLDTDAASSCSLDPLWFEASSSADAQRWDPLLSRCEPALLHCLQGQRRRLEVKSLRLKLQKLQDKAIEEDDYDKAEMIQQRLEALEKERSSLHFQLPSQQPALSALLGHLGAQAQASLRWAAQRAGGDDPQARLRMDPKTLEAAAQDSLRVSITRRDWLLREKQQLQKEIETLQARMSVLEAKDQQLRREIEEQERLLPWQGCDLVGGLSLGELQEVTKTLQDTLALAEQIPLHAEPPETIRSLQERIKSLSLSLKEITAKVCMSERLCSALRKKVNDIETQLPALFEAKMLAISGNHFYTAKELTEEIRSLTLEREALEGLLHKLLVLSSRNVQKLGSVKEDYSRLRQELDQGRAAYETSVKVNTMKYMEMLEEKLHSCKCPLLGKVWEADLEACRLLIQSLQLQEARGSLFADERQTDDLGGGTYTMALATPLRSHLEDERKNPLQAFEEWTVHLTPSPHCASSEQKEESYIFSAELGEKCETIGKKLLYLEDQLHVAIHSHDEDLIQSLKGELQMVKETLQAMALQLQPAKEAGEREAAASCVTAGIREAQS
SIO_010081: DISC1
subclass of: SO_0000673
so part of: DISC1
location: join(4470206..4470263,4553842..4554818,4567057..4567126,4614538..4614685,4629372..4629501,4633255..4633481,4664000..4664054,4668414..4668516,4680518..4680706,4805990..4806050,4861715..4861988,4882837..4882954,4891332..4891471)
location: region:4470206-4891471:1
so has part: feature:4470206-4470263:1:exon
so has part: feature:4553842-4554818:1:exon
so has part: feature:4567057-4567126:1:exon
so has part: feature:4614538-4614685:1:exon
so has part: feature:4629372-4629501:1:exon
so has part: feature:4633255-4633481:1:exon
so has part: feature:4664000-4664054:1:exon
so has part: feature:4668414-4668516:1:exon
so has part: feature:4680518-4680706:1:exon
so has part: feature:4805990-4806050:1:exon
so has part: feature:4861715-4861988:1:exon
so has part: feature:4882837-4882954:1:exon
so has part: feature:4891332-4891471:1:exon

XP_027386284.1
type: Protein
SIO_000068: ncbiprotein

position:4470206:1
position: 4470206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4891471:1
position: 4891471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4470206-4470263:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4553842-4554818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4567057-4567126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4614538-4614685:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4629372-4629501:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4633255-4633481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4664000-4664054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4668414-4668516:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4680518-4680706:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4805990-4806050:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4861715-4861988:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4882837-4882954:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4891332-4891471:1:exon

DISC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: DISC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disrupted in schizophrenia 1 protein isoform X2
translation: MLGGGPQGAPASGGRGHRAGSQDCSPPAASFRRRRLARRPGYMRSAAGPRIGFLSPPVGAPFRAQGGACGKESHHLESRAGPCGLDPGGQWRGCSVGSLIPRSTATSALTVGHRGPALTAAKGSPGLLGSQPRAGTALPNRLSRLCGPRATGCRGELPSTDTREAPSPCREAWNKGCPSPEDMSDTSCSLGSGPQAPAIPASSQDVFTSSFSFIRLSLGSAGERGEAEGCPPSREAEGPHQSLEEMEAKAASSGGPHDHPRLLSLPFTLKATQGLADATQTSGGSRGLECQTLPLLDTDAASSCSLDPLWFEASSSADAQRWDPLLSRCEPALLHCLQGQRRRLEVKSLRLKLQKLQDKAIEEDDYDKAEMIQQRLEALEKERSSLHFQLPSQQPALSALLGHLGAQAQASLRWAAQRAGGDDPQARLRMDPKTLEAAAQDSLRVSITRRDWLLREKQQLQKEIETLQARMSVLEAKDQQLRREIEEQERLLPWQGCDLVGGLSLGELQEVTKTLQDTLALAEQIPLHAEPPETIRRKPFLYSQGAHRGDQIINTGEGSAGGTSSQAVGTEFQERPKAGKCERRLQQTQARTGPGESCL
SIO_010081: DISC1
subclass of: SO_0000673
so part of: DISC1
location: join(4470206..4470263,4553842..4554818,4567057..4567126,4614538..4614685,4629372..4629501,4633255..4633481,4680518..4680706,4805990)
location: region:4470206-4805990:1
so has part: feature:4470206-4470263:1:exon
so has part: feature:4553842-4554818:1:exon
so has part: feature:4567057-4567126:1:exon
so has part: feature:4614538-4614685:1:exon
so has part: feature:4629372-4629501:1:exon
so has part: feature:4633255-4633481:1:exon
so has part: feature:4680518-4680706:1:exon
so has part: feature:4805990-4805990:1:exon

XP_027386285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4470206-4470263:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4553842-4554818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4567057-4567126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4614538-4614685:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4629372-4629501:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4633255-4633481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4680518-4680706:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4805990-4805990:1:exon

LOC113885649
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885649
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4829901..4830022
location: region:4829901-4830022:1
so has part: feature:4829901-4830022:1:exon
subclass of: SO_0000578

113885649
type: Gene
SIO_000068: ncbigene

position:4829901:1
position: 4829901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4830022:1
position: 4830022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4829901-4830022:1:exon

LOC113885649
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: snoRNA
gene: LOC113885649
product: small nucleolar RNA SNORA25
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00402
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509299.1
SIO_010081: LOC113885649
subclass of: SO_0000673
so part of: LOC113885649
location: 4829901..4830022
location: region:4829901-4830022:1
so has part: feature:4829901-4830022:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4829901-4830022:1:exon

TRNAG-GCC
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TRNAG-GCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(5150221..5150292)
location: region:5150221-5150292:-1
so has part: feature:5150221-5150292:-1:exon
subclass of: SO_0000663

113885671
type: Gene
SIO_000068: ncbigene

position:5150221:-1
position: 5150221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5150292:-1
position: 5150292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5150221-5150292:-1:exon

TRNAG-GCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30522
gene: TRNAG-GCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(5150257..5150259),aa:Gly, seq:gcc)
SIO_010081: TRNAG-GCC
subclass of: SO_0000673
so part of: TRNAG-GCC
location: complement(5150221..5150292)
location: region:5150221-5150292:-1
so has part: feature:5150221-5150292:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5150221-5150292:-1:exon

SIPA1L2
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: SIPA1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5234572..5481515)
location: region:5234572-5481515:-1
so has part: feature:5234572-5481515:-1:exon
subclass of: SO_0000010

113885574
type: Gene
SIO_000068: ncbigene

position:5234572:-1
position: 5234572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5481515:-1
position: 5481515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5234572-5481515:-1:exon

SIPA1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SIPA1L2
product: signal induced proliferation associated 1 like 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 3 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_027531068.1
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5234572..5235830,5239044..5239125,5240267..5240390,5253289..5253420,5261216..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352684,5415806..5415851,5481258..5481515))
location: region:5234572-5481515:-1
so has part: feature:5481258-5481515:-1:exon
so has part: feature:5415806-5415851:-1:exon
so has part: feature:5350969-5352684:-1:exon
so has part: feature:5332001-5332134:-1:exon
so has part: feature:5330072-5330260:-1:exon
so has part: feature:5322202-5322376:-1:exon
so has part: feature:5317209-5317312:-1:exon
so has part: feature:5306655-5306812:-1:exon
so has part: feature:5302772-5303348:-1:exon
so has part: feature:5298500-5298774:-1:exon
so has part: feature:5283676-5283933:-1:exon
so has part: feature:5281540-5281623:-1:exon
so has part: feature:5279779-5279879:-1:exon
so has part: feature:5279318-5279421:-1:exon
so has part: feature:5277253-5277638:-1:exon
so has part: feature:5268811-5269035:-1:exon
so has part: feature:5263635-5263788:-1:exon
so has part: feature:5261216-5261435:-1:exon
so has part: feature:5253289-5253420:-1:exon
so has part: feature:5240267-5240390:-1:exon
so has part: feature:5239044-5239125:-1:exon
so has part: feature:5234572-5235830:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5481258-5481515:-1:exon

position:5481258:-1
position: 5481258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5415806-5415851:-1:exon

position:5415806:-1
position: 5415806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5415851:-1
position: 5415851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5350969-5352684:-1:exon

position:5350969:-1
position: 5350969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5352684:-1
position: 5352684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5332001-5332134:-1:exon

position:5332001:-1
position: 5332001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5332134:-1
position: 5332134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5330072-5330260:-1:exon

position:5330072:-1
position: 5330072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5330260:-1
position: 5330260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5322202-5322376:-1:exon

position:5322202:-1
position: 5322202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5322376:-1
position: 5322376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5317209-5317312:-1:exon

position:5317209:-1
position: 5317209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5317312:-1
position: 5317312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5306655-5306812:-1:exon

position:5306655:-1
position: 5306655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5306812:-1
position: 5306812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5302772-5303348:-1:exon

position:5302772:-1
position: 5302772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5303348:-1
position: 5303348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5298500-5298774:-1:exon

position:5298500:-1
position: 5298500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5298774:-1
position: 5298774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5283676-5283933:-1:exon

position:5283676:-1
position: 5283676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5283933:-1
position: 5283933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5281540-5281623:-1:exon

position:5281540:-1
position: 5281540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5281623:-1
position: 5281623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5279779-5279879:-1:exon

position:5279779:-1
position: 5279779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5279879:-1
position: 5279879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5279318-5279421:-1:exon

position:5279318:-1
position: 5279318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5279421:-1
position: 5279421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5277253-5277638:-1:exon

position:5277253:-1
position: 5277253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5277638:-1
position: 5277638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5268811-5269035:-1:exon

position:5268811:-1
position: 5268811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5269035:-1
position: 5269035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5263635-5263788:-1:exon

position:5263635:-1
position: 5263635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5263788:-1
position: 5263788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5261216-5261435:-1:exon

position:5261216:-1
position: 5261216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5261435:-1
position: 5261435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5253289-5253420:-1:exon

position:5253289:-1
position: 5253289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5253420:-1
position: 5253420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5240267-5240390:-1:exon

position:5240267:-1
position: 5240267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5240390:-1
position: 5240390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5239044-5239125:-1:exon

position:5239044:-1
position: 5239044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5239125:-1
position: 5239125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5234572-5235830:-1:exon

position:5235830:-1
position: 5235830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIPA1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SIPA1L2
product: signal induced proliferation associated 1 like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_027531061.1
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5234572..5235830,5239044..5239125,5240267..5240390,5240913..5240966,5253289..5253420,5261171..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352684,5415806..5415851,5481258..5481515))
location: region:5234572-5481515:-1
so has part: feature:5481258-5481515:-1:exon
so has part: feature:5415806-5415851:-1:exon
so has part: feature:5350969-5352684:-1:exon
so has part: feature:5332001-5332134:-1:exon
so has part: feature:5330072-5330260:-1:exon
so has part: feature:5322202-5322376:-1:exon
so has part: feature:5317209-5317312:-1:exon
so has part: feature:5306655-5306812:-1:exon
so has part: feature:5302772-5303348:-1:exon
so has part: feature:5298500-5298774:-1:exon
so has part: feature:5283676-5283933:-1:exon
so has part: feature:5281540-5281623:-1:exon
so has part: feature:5279779-5279879:-1:exon
so has part: feature:5279318-5279421:-1:exon
so has part: feature:5277253-5277638:-1:exon
so has part: feature:5268811-5269035:-1:exon
so has part: feature:5263635-5263788:-1:exon
so has part: feature:5261171-5261435:-1:exon
so has part: feature:5253289-5253420:-1:exon
so has part: feature:5240913-5240966:-1:exon
so has part: feature:5240267-5240390:-1:exon
so has part: feature:5239044-5239125:-1:exon
so has part: feature:5234572-5235830:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5481258-5481515:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5415806-5415851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5350969-5352684:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5332001-5332134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5330072-5330260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5322202-5322376:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5317209-5317312:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5306655-5306812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5302772-5303348:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5298500-5298774:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5283676-5283933:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5281540-5281623:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5279779-5279879:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5279318-5279421:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5277253-5277638:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5268811-5269035:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5263635-5263788:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5261171-5261435:-1:exon

position:5261171:-1
position: 5261171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5253289-5253420:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5240913-5240966:-1:exon

position:5240913:-1
position: 5240913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5240966:-1
position: 5240966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5240267-5240390:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5239044-5239125:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5234572-5235830:-1:exon

SIPA1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SIPA1L2
product: signal induced proliferation associated 1 like 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_027531063.1
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5234572..5235830,5239044..5239125,5240267..5240390,5240913..5240966,5253289..5253420,5261171..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281620,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352684,5415806..5415851,5479302..5479539))
location: region:5234572-5479539:-1
so has part: feature:5479302-5479539:-1:exon
so has part: feature:5415806-5415851:-1:exon
so has part: feature:5350969-5352684:-1:exon
so has part: feature:5332001-5332134:-1:exon
so has part: feature:5330072-5330260:-1:exon
so has part: feature:5322202-5322376:-1:exon
so has part: feature:5317209-5317312:-1:exon
so has part: feature:5306655-5306812:-1:exon
so has part: feature:5302772-5303348:-1:exon
so has part: feature:5298500-5298774:-1:exon
so has part: feature:5283676-5283933:-1:exon
so has part: feature:5281540-5281620:-1:exon
so has part: feature:5279779-5279879:-1:exon
so has part: feature:5279318-5279421:-1:exon
so has part: feature:5277253-5277638:-1:exon
so has part: feature:5268811-5269035:-1:exon
so has part: feature:5263635-5263788:-1:exon
so has part: feature:5261171-5261435:-1:exon
so has part: feature:5253289-5253420:-1:exon
so has part: feature:5240913-5240966:-1:exon
so has part: feature:5240267-5240390:-1:exon
so has part: feature:5239044-5239125:-1:exon
so has part: feature:5234572-5235830:-1:exon

position:5479539:-1
position: 5479539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5479302-5479539:-1:exon

position:5479302:-1
position: 5479302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5415806-5415851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5350969-5352684:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5332001-5332134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5330072-5330260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5322202-5322376:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5317209-5317312:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5306655-5306812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5302772-5303348:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5298500-5298774:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5283676-5283933:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5281540-5281620:-1:exon

position:5281620:-1
position: 5281620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5279779-5279879:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5279318-5279421:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5277253-5277638:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5268811-5269035:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5263635-5263788:-1:exon

urn:…
SIO_000300: 18
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SIPA1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SIPA1L2
product: signal induced proliferation associated 1 like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_027531060.1
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5234572..5235830,5239044..5239125,5240267..5240390,5240913..5240966,5253289..5253420,5261171..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352684,5415806..5415851,5479302..5479538))
location: region:5234572-5479538:-1
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position:5479538:-1
position: 5479538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 23
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SIPA1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SIPA1L2
product: signal induced proliferation associated 1 like 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_027531069.1
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5234572..5235830,5239044..5239125,5240267..5240390,5261216..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352684,5415806..5415851,5479302..5479537))
location: region:5234572-5479537:-1
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position:5479537:-1
position: 5479537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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SIPA1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SIPA1L2
product: signal induced proliferation associated 1 like 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_027531064.1
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5234572..5235830,5239044..5239125,5240267..5240390,5240913..5240966,5253289..5253420,5261216..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352684,5415806..5415851,5479302..5479537))
location: region:5234572-5479537:-1
so has part: feature:5479302-5479537:-1:exon
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urn:…
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urn:…
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SIPA1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SIPA1L2
product: signal induced proliferation associated 1 like 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_027531066.1
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5234572..5235830,5239044..5239125,5240267..5240390,5253289..5253420,5261171..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352684,5415806..5415851,5479302..5479537))
location: region:5234572-5479537:-1
so has part: feature:5479302-5479537:-1:exon
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urn:…
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SIPA1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SIPA1L2
product: signal induced proliferation associated 1 like 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 2 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_027531067.1
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5234572..5235830,5239044..5239125,5240267..5240390,5253289..5253420,5261216..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352684,5415806..5415851,5479302..5479536))
location: region:5234572-5479536:-1
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position:5479536:-1
position: 5479536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 17
SIO_000628: feature:5263635-5263788:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5261216-5261435:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5253289-5253420:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5240267-5240390:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5239044-5239125:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5234572-5235830:-1:exon

SIPA1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SIPA1L2
product: signal induced proliferation associated 1 like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_027531062.1
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5234572..5235830,5239044..5239125,5240267..5240390,5240913..5240966,5253289..5253420,5261171..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352684,5415806..5415851,5435538..5435702))
location: region:5234572-5435702:-1
so has part: feature:5435538-5435702:-1:exon
so has part: feature:5415806-5415851:-1:exon
so has part: feature:5350969-5352684:-1:exon
so has part: feature:5332001-5332134:-1:exon
so has part: feature:5330072-5330260:-1:exon
so has part: feature:5322202-5322376:-1:exon
so has part: feature:5317209-5317312:-1:exon
so has part: feature:5306655-5306812:-1:exon
so has part: feature:5302772-5303348:-1:exon
so has part: feature:5298500-5298774:-1:exon
so has part: feature:5283676-5283933:-1:exon
so has part: feature:5281540-5281623:-1:exon
so has part: feature:5279779-5279879:-1:exon
so has part: feature:5279318-5279421:-1:exon
so has part: feature:5277253-5277638:-1:exon
so has part: feature:5268811-5269035:-1:exon
so has part: feature:5263635-5263788:-1:exon
so has part: feature:5261171-5261435:-1:exon
so has part: feature:5253289-5253420:-1:exon
so has part: feature:5240913-5240966:-1:exon
so has part: feature:5240267-5240390:-1:exon
so has part: feature:5239044-5239125:-1:exon
so has part: feature:5234572-5235830:-1:exon

position:5435702:-1
position: 5435702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5435538-5435702:-1:exon

position:5435538:-1
position: 5435538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5415806-5415851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5350969-5352684:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5332001-5332134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5330072-5330260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5322202-5322376:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5317209-5317312:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5306655-5306812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5302772-5303348:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5298500-5298774:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5283676-5283933:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5281540-5281623:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5279779-5279879:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5279318-5279421:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5277253-5277638:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5268811-5269035:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5263635-5263788:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5261171-5261435:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5253289-5253420:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5240913-5240966:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5240267-5240390:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5239044-5239125:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5234572-5235830:-1:exon

SIPA1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SIPA1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 2 isoform X2
translation: MSDPRQSQEEKHKLGRACSKFKDPPRIMQSDDYFARKFKAINGNMGPTTSLTASSSNESGGPANGTPAVPKMGVRARVSEWPPKKDCSKELTCKTLWESRSQTSYESVTSIIHNGQNDGSEGQQEEPLDLDFVEAKYTIGDIFVHSPQRGLHPIRQRSNSDVTISDIDAEDVLDQNAVNPNTGAALHREYGSTSSIDRQGLSGENFFAMLRGYRLENYDHKAMAPFGFPEFFPCDPAISPSLHAAAQISRGEFVRISGLDYMDSALLLGRDRDKPFKRRLKSESVETSLFRKLRAVKSEHETFKFACELEDGRLERGVRPWNCQRCFAHYDVQSILFNINEAMATRANVGKRKNITTGASAASQTQMPAGPQGSCDSPLGSKEDLNSKENLDADEGDGKSNDLVLSCPYFRNETGGEGDRRIALSRANSSSFSSGESCSFESSLSSHCTNAGVSVLEVPRENQPIHREKVKRYVIEHIDLGAYYYRKFFYGKEHQNYFGIDENLGPVAVSVRREKVEDPKEKEGSQFNYRVVFRTSELTTLRGAILEDAIPSTARHGTARGLPLKEVLEYVIPELSIQCLRQASSSPKVSEQLLKLDEQGLSFQHKIGILYCKAGQSTEEEMYNNETAGPAFEEFLDLLGQRVRLKGFSKYRAQLDNKTDSTGTHSLYTTYKDYELMFHVCTMLPHTPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPKSIRSHFQHVFVIVKVHNPCTENVCYSVGVSRSKDVPPFGPPIPKGVTFPKSAVFRDFLLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAENFVTTATVDTSAKFSFITLGAKKKEKVKPRKDAHLFSVGAIMWHVVARDFGQSADIECLLGVSNEFIMLIEKDSKNVVFNCSCRDVIGWTSGLMSIKVFYERGECILLSSVDSCAEDVREIVQRLGIVTRGCETVEMTLRRNGLGQLGFHVNFEGIVADVEPFGFAWKAGLRQGSRLVEICKVAVATLTHEQMIDLLRTSVTVKVVIIQPHDDGSPRRGCSELCRIPMVEYKLDSEGAPCEYKTPFRRNTTWHRVPTPALQPLPRVSPVPSTPDRLQCQPLLPQSQAAIPRSTSFDRKLPDGTSSPSNQSSSSDPGPGSSGPWRPQVGYDGCQSPLLLEHQGSGPLECDGAREREDTVEGSRHAETKWHGPPSKVLSSYKERGLQKDGGCKDSPNKLSHIGDKSCSSHSSSNTLSSNTSSNSDDKHFGSGDLMDPELLGLTYIKGASTDSGIDTAPCMPAAVLGPVHLAGSRSLVHGRAEQWADSDIPGPDDEQAKMYAVHGYAPGISTSGAANGSLGDLSEISSHSSGSHHSGSPSAHCSKSSGSLDTSKVYIVSHGSGQQAPGSMSKAYHRQAAVNKYIIGWKKSEDSPPPEEPEVAECQGLYSEMDLLSSAAQQQAVVGDAVSETQHVLSKEDFLKLMLPDSPSVEEGRRKFSFYGNLSPRRSLYRTLSDESICSHRRGSSFGSSRSSILDQALPNDILFSTTPPYHSTLPPRTQPVPSVGSLRSECLGRTAPASRALWDEFWFSDGSLSDKSKCADPGLMPLPDTATGLDWTHLVDAARAFEGLDSDEELGLLCHHTSYLDQRVASFCTLTDMHPEQDLEGAQELPLCVDPGSGKDFMDPAGERSPSTLTGKVNQLELILRQLQTDLRKEKQDKAVLQAEVQHLRQDNLRLQEESQTAAAQLRKFTEWFFNTIDKKP
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5235684..5235830,5239044..5239125,5240267..5240390,5240913..5240966,5253289..5253420,5261171..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281620,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352445))
location: region:5235684-5352445:-1
so has part: feature:5350969-5352445:-1:exon
so has part: feature:5332001-5332134:-1:exon
so has part: feature:5330072-5330260:-1:exon
so has part: feature:5322202-5322376:-1:exon
so has part: feature:5317209-5317312:-1:exon
so has part: feature:5306655-5306812:-1:exon
so has part: feature:5302772-5303348:-1:exon
so has part: feature:5298500-5298774:-1:exon
so has part: feature:5283676-5283933:-1:exon
so has part: feature:5281540-5281620:-1:exon
so has part: feature:5279779-5279879:-1:exon
so has part: feature:5279318-5279421:-1:exon
so has part: feature:5277253-5277638:-1:exon
so has part: feature:5268811-5269035:-1:exon
so has part: feature:5263635-5263788:-1:exon
so has part: feature:5261171-5261435:-1:exon
so has part: feature:5253289-5253420:-1:exon
so has part: feature:5240913-5240966:-1:exon
so has part: feature:5240267-5240390:-1:exon
so has part: feature:5239044-5239125:-1:exon
so has part: feature:5235684-5235830:-1:exon

XP_027386864.1
type: Protein
SIO_000068: ncbiprotein

position:5235684:-1
position: 5235684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5352445:-1
position: 5352445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5350969-5352445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5332001-5332134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5330072-5330260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5322202-5322376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5317209-5317312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306655-5306812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5302772-5303348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5298500-5298774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5283676-5283933:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5281540-5281620:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5279779-5279879:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5279318-5279421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5277253-5277638:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5268811-5269035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5263635-5263788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5261171-5261435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5253289-5253420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5240913-5240966:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5240267-5240390:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5239044-5239125:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5235684-5235830:-1:exon

SIPA1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SIPA1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 2 isoform X6
translation: MSDPRQSQEEKHKLGRACSKFKDPPRIMQSDDYFARKFKAINGNMGPTTSLTASSSNESGGPANGTPAVPKMGVRARVSEWPPKKDCSKELTCKTLWESRSQTSYESVTSIIHNGQNDGSEGQQEEPLDLDFVEAKYTIGDIFVHSPQRGLHPIRQRSNSDVTISDIDAEDVLDQNAVNPNTGAALHREYGSTSSIDRQGLSGENFFAMLRGYRLENYDHKAMAPFGFPEFFPCDPAISPSLHAAAQISRGEFVRISGLDYMDSALLLGRDRDKPFKRRLKSESVETSLFRKLRAVKSEHETFKFACELEDGRLERGVRPWNCQRCFAHYDVQSILFNINEAMATRANVGKRKNITTGASAASQTQMPAGPQGSCDSPLGSKEDLNSKENLDADEGDGKSNDLVLSCPYFRNETGGEGDRRIALSRANSSSFSSGESCSFESSLSSHCTNAGVSVLEVPRENQPIHREKVKRYVIEHIDLGAYYYRKFFYGKEHQNYFGIDENLGPVAVSVRREKVEDPKEKEGSQFNYRVVFRTSELTTLRGAILEDAIPSTARHGTARGLPLKEVLEYVIPELSIQCLRQASSSPKVSEQLLKLDEQGLSFQHKIGILYCKAGQSTEEEMYNNETAGPAFEEFLDLLGQRVRLKGFSKYRAQLDNKTDSTGTHSLYTTYKDYELMFHVCTMLPHTPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPKSIRSHFQHVFVIVKVHNPCTENVCYSVGVSRSKDVPPFGPPIPKGVTFPKSAVFRDFLLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAENFVTTATVDTSAKFSFITLGAKKKEKVKPRKDAHLFSVGAIMWHVVARDFGQSADIECLLGVSNEFIMLIEKDSKNVVFNCSCRDVIGWTSGLMSIKVFYERGECILLSSVDSCAEDVREIVQRLGIVTRGCETVEMTLRRNGLGQLGFHVNFEGIVADVEPFGFAWKAGLRQGSRLVEICKVAVATLTHEQMIDLLRTSVTVKVVIIQPHDDGSPRRGCSELCRIPMVEYKLDSEGAPCEYKTPFRRNTTWHRVPTPALQPLPRVSPVPSTPDRLQCQPLLPQSQAAIPRSTSFDRKLPDGTRSSPSNQSSSSDPGPGSSGPWRPQVGYDGCQSPLLLEHQGSGPLECDGAREREDTVEGSRHAETKWHGPPSKVLSSYKERGLQKDGGCKDSPNKLSHIGDKSCSSHSSSNTLSSNTSSNSDDKHFGSGDLMDPELLGLTYIKGASTDSGIDTAPCMPAAVLGPVHLAGSRSLVHGRAEQWADSDIPGPDDEQAKMYAVHGYAPGISTSGAANGSLGDLSEISSHSSGSHHSGSPSAHCSKSSGSLDTSKVYIVSHGSGQQAPGSMSKAYHRQAAVNKYIIGWKKSEDSPPPEEPEVAECQGLYSEMDLLSSAAQQQAVVGDAVSETQHVLSKEDFLKLMLPDSPSVEEGRRKFSFYGNLSPRRSLYRTLSDESICSHRRGSSFGSSRSSILDQALPNDILFSTTPPYHSTLPPRTQPVPSVGSLRNQRVASFCTLTDMHPEQDLEGAQELPLCVDPGSGKDFMDPAGERSPSTLTGKVNQLELILRQLQTDLRKEKQDKAVLQAEVQHLRQDNLRLQEESQTAAAQLRKFTEWFFNTIDKKP
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5235684..5235830,5239044..5239125,5240267..5240390,5261216..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352445))
location: region:5235684-5352445:-1
so has part: feature:5350969-5352445:-1:exon
so has part: feature:5332001-5332134:-1:exon
so has part: feature:5330072-5330260:-1:exon
so has part: feature:5322202-5322376:-1:exon
so has part: feature:5317209-5317312:-1:exon
so has part: feature:5306655-5306812:-1:exon
so has part: feature:5302772-5303348:-1:exon
so has part: feature:5298500-5298774:-1:exon
so has part: feature:5283676-5283933:-1:exon
so has part: feature:5281540-5281623:-1:exon
so has part: feature:5279779-5279879:-1:exon
so has part: feature:5279318-5279421:-1:exon
so has part: feature:5277253-5277638:-1:exon
so has part: feature:5268811-5269035:-1:exon
so has part: feature:5263635-5263788:-1:exon
so has part: feature:5261216-5261435:-1:exon
so has part: feature:5240267-5240390:-1:exon
so has part: feature:5239044-5239125:-1:exon
so has part: feature:5235684-5235830:-1:exon

XP_027386870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5350969-5352445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5332001-5332134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5330072-5330260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5322202-5322376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5317209-5317312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306655-5306812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5302772-5303348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5298500-5298774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5283676-5283933:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5281540-5281623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5279779-5279879:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5279318-5279421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5277253-5277638:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5268811-5269035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5263635-5263788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5261216-5261435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5240267-5240390:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5239044-5239125:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5235684-5235830:-1:exon

SIPA1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SIPA1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 2 isoform X5
translation: MSDPRQSQEEKHKLGRACSKFKDPPRIMQSDDYFARKFKAINGNMGPTTSLTASSSNESGGPANGTPAVPKMGVRARVSEWPPKKDCSKELTCKTLWESRSQTSYESVTSIIHNGQNDGSEGQQEEPLDLDFVEAKYTIGDIFVHSPQRGLHPIRQRSNSDVTISDIDAEDVLDQNAVNPNTGAALHREYGSTSSIDRQGLSGENFFAMLRGYRLENYDHKAMAPFGFPEFFPCDPAISPSLHAAAQISRGEFVRISGLDYMDSALLLGRDRDKPFKRRLKSESVETSLFRKLRAVKSEHETFKFACELEDGRLERGVRPWNCQRCFAHYDVQSILFNINEAMATRANVGKRKNITTGASAASQTQMPAGPQGSCDSPLGSKEDLNSKENLDADEGDGKSNDLVLSCPYFRNETGGEGDRRIALSRANSSSFSSGESCSFESSLSSHCTNAGVSVLEVPRENQPIHREKVKRYVIEHIDLGAYYYRKFFYGKEHQNYFGIDENLGPVAVSVRREKVEDPKEKEGSQFNYRVVFRTSELTTLRGAILEDAIPSTARHGTARGLPLKEVLEYVIPELSIQCLRQASSSPKVSEQLLKLDEQGLSFQHKIGILYCKAGQSTEEEMYNNETAGPAFEEFLDLLGQRVRLKGFSKYRAQLDNKTDSTGTHSLYTTYKDYELMFHVCTMLPHTPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPKSIRSHFQHVFVIVKVHNPCTENVCYSVGVSRSKDVPPFGPPIPKGVTFPKSAVFRDFLLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAENFVTTATVDTSAKFSFITLGAKKKEKVKPRKDAHLFSVGAIMWHVVARDFGQSADIECLLGVSNEFIMLIEKDSKNVVFNCSCRDVIGWTSGLMSIKVFYERGECILLSSVDSCAEDVREIVQRLGIVTRGCETVEMTLRRNGLGQLGFHVNFEGIVADVEPFGFAWKAGLRQGSRLVEICKVAVATLTHEQMIDLLRTSVTVKVVIIQPHDDGSPRRGCSELCRIPMVEYKLDSEGAPCEYKTPFRRNTTWHRVPTPALQPLPRVSPVPSTPDRLQCQPLLPQSQAAIPRSTSFDRKLPDGTRSSPSNQSSSSDPGPGSSGPWRPQVGYDGCQSPLLLEHQGSGPLECDGAREREDTVEGSRHAETKWHGPPSKVLSSYKERGLQKDGGCKDSPNKLSHIGDKSCSSHSSSNTLSSNTSSNSDDKHFGSGDLMDPELLGLTYIKGASTDSGIDTAPCMPAAVLGPVHLAGSRSLVHGRAEQWADSDIPGPDDEQAKMYAVHGYAPGISTSGAANGSLGDLSEISSHSSGSHHSGSPSAHCSKSSGSLDTSKVYIVSHGSGQQAPGSMSKAYHRQAAVNKYIIGWKKSEDSPPPEEPEVAECQGLYSEMDLLSSAAQQQAVVGDAVSETQHVLSKEDFLKLMLPDSPSVEEGRRKFSFYGNLSPRRSLYRTLSDESICSHRRGSSFGSSRSSILDQALPNDILFSTTPPYHSTLPPRTQPVPSVGSLRNEFWFSDGSLSDKSKCADPGLMPLPDTATGLDWTHLVDAARAFEDQRVASFCTLTDMHPEQDLEGAQELPLCVDPGSGKDFMDPAGERSPSTLTGKVNQLELILRQLQTDLRKEKQDKAVLQAEVQHLRQDNLRLQEESQTAAAQLRKFTEWFFNTIDKKP
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5235684..5235830,5239044..5239125,5240267..5240390,5253289..5253420,5261216..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352445))
location: region:5235684-5352445:-1
so has part: feature:5350969-5352445:-1:exon
so has part: feature:5332001-5332134:-1:exon
so has part: feature:5330072-5330260:-1:exon
so has part: feature:5322202-5322376:-1:exon
so has part: feature:5317209-5317312:-1:exon
so has part: feature:5306655-5306812:-1:exon
so has part: feature:5302772-5303348:-1:exon
so has part: feature:5298500-5298774:-1:exon
so has part: feature:5283676-5283933:-1:exon
so has part: feature:5281540-5281623:-1:exon
so has part: feature:5279779-5279879:-1:exon
so has part: feature:5279318-5279421:-1:exon
so has part: feature:5277253-5277638:-1:exon
so has part: feature:5268811-5269035:-1:exon
so has part: feature:5263635-5263788:-1:exon
so has part: feature:5261216-5261435:-1:exon
so has part: feature:5253289-5253420:-1:exon
so has part: feature:5240267-5240390:-1:exon
so has part: feature:5239044-5239125:-1:exon
so has part: feature:5235684-5235830:-1:exon

XP_027386868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5350969-5352445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5332001-5332134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5330072-5330260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5322202-5322376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5317209-5317312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306655-5306812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5302772-5303348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5298500-5298774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5283676-5283933:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5281540-5281623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5279779-5279879:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5279318-5279421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5277253-5277638:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5268811-5269035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5263635-5263788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5261216-5261435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5253289-5253420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5240267-5240390:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5239044-5239125:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5235684-5235830:-1:exon

SIPA1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SIPA1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 2 isoform X5
translation: MSDPRQSQEEKHKLGRACSKFKDPPRIMQSDDYFARKFKAINGNMGPTTSLTASSSNESGGPANGTPAVPKMGVRARVSEWPPKKDCSKELTCKTLWESRSQTSYESVTSIIHNGQNDGSEGQQEEPLDLDFVEAKYTIGDIFVHSPQRGLHPIRQRSNSDVTISDIDAEDVLDQNAVNPNTGAALHREYGSTSSIDRQGLSGENFFAMLRGYRLENYDHKAMAPFGFPEFFPCDPAISPSLHAAAQISRGEFVRISGLDYMDSALLLGRDRDKPFKRRLKSESVETSLFRKLRAVKSEHETFKFACELEDGRLERGVRPWNCQRCFAHYDVQSILFNINEAMATRANVGKRKNITTGASAASQTQMPAGPQGSCDSPLGSKEDLNSKENLDADEGDGKSNDLVLSCPYFRNETGGEGDRRIALSRANSSSFSSGESCSFESSLSSHCTNAGVSVLEVPRENQPIHREKVKRYVIEHIDLGAYYYRKFFYGKEHQNYFGIDENLGPVAVSVRREKVEDPKEKEGSQFNYRVVFRTSELTTLRGAILEDAIPSTARHGTARGLPLKEVLEYVIPELSIQCLRQASSSPKVSEQLLKLDEQGLSFQHKIGILYCKAGQSTEEEMYNNETAGPAFEEFLDLLGQRVRLKGFSKYRAQLDNKTDSTGTHSLYTTYKDYELMFHVCTMLPHTPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPKSIRSHFQHVFVIVKVHNPCTENVCYSVGVSRSKDVPPFGPPIPKGVTFPKSAVFRDFLLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAENFVTTATVDTSAKFSFITLGAKKKEKVKPRKDAHLFSVGAIMWHVVARDFGQSADIECLLGVSNEFIMLIEKDSKNVVFNCSCRDVIGWTSGLMSIKVFYERGECILLSSVDSCAEDVREIVQRLGIVTRGCETVEMTLRRNGLGQLGFHVNFEGIVADVEPFGFAWKAGLRQGSRLVEICKVAVATLTHEQMIDLLRTSVTVKVVIIQPHDDGSPRRGCSELCRIPMVEYKLDSEGAPCEYKTPFRRNTTWHRVPTPALQPLPRVSPVPSTPDRLQCQPLLPQSQAAIPRSTSFDRKLPDGTRSSPSNQSSSSDPGPGSSGPWRPQVGYDGCQSPLLLEHQGSGPLECDGAREREDTVEGSRHAETKWHGPPSKVLSSYKERGLQKDGGCKDSPNKLSHIGDKSCSSHSSSNTLSSNTSSNSDDKHFGSGDLMDPELLGLTYIKGASTDSGIDTAPCMPAAVLGPVHLAGSRSLVHGRAEQWADSDIPGPDDEQAKMYAVHGYAPGISTSGAANGSLGDLSEISSHSSGSHHSGSPSAHCSKSSGSLDTSKVYIVSHGSGQQAPGSMSKAYHRQAAVNKYIIGWKKSEDSPPPEEPEVAECQGLYSEMDLLSSAAQQQAVVGDAVSETQHVLSKEDFLKLMLPDSPSVEEGRRKFSFYGNLSPRRSLYRTLSDESICSHRRGSSFGSSRSSILDQALPNDILFSTTPPYHSTLPPRTQPVPSVGSLRNEFWFSDGSLSDKSKCADPGLMPLPDTATGLDWTHLVDAARAFEDQRVASFCTLTDMHPEQDLEGAQELPLCVDPGSGKDFMDPAGERSPSTLTGKVNQLELILRQLQTDLRKEKQDKAVLQAEVQHLRQDNLRLQEESQTAAAQLRKFTEWFFNTIDKKP
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5235684..5235830,5239044..5239125,5240267..5240390,5253289..5253420,5261216..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352445))
location: region:5235684-5352445:-1
so has part: feature:5350969-5352445:-1:exon
so has part: feature:5332001-5332134:-1:exon
so has part: feature:5330072-5330260:-1:exon
so has part: feature:5322202-5322376:-1:exon
so has part: feature:5317209-5317312:-1:exon
so has part: feature:5306655-5306812:-1:exon
so has part: feature:5302772-5303348:-1:exon
so has part: feature:5298500-5298774:-1:exon
so has part: feature:5283676-5283933:-1:exon
so has part: feature:5281540-5281623:-1:exon
so has part: feature:5279779-5279879:-1:exon
so has part: feature:5279318-5279421:-1:exon
so has part: feature:5277253-5277638:-1:exon
so has part: feature:5268811-5269035:-1:exon
so has part: feature:5263635-5263788:-1:exon
so has part: feature:5261216-5261435:-1:exon
so has part: feature:5253289-5253420:-1:exon
so has part: feature:5240267-5240390:-1:exon
so has part: feature:5239044-5239125:-1:exon
so has part: feature:5235684-5235830:-1:exon

XP_027386869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5350969-5352445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5332001-5332134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5330072-5330260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5322202-5322376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5317209-5317312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306655-5306812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5302772-5303348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5298500-5298774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5283676-5283933:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5281540-5281623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5279779-5279879:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5279318-5279421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5277253-5277638:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5268811-5269035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5263635-5263788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5261216-5261435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5253289-5253420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5240267-5240390:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5239044-5239125:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5235684-5235830:-1:exon

SIPA1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SIPA1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 2 isoform X3
translation: MSDPRQSQEEKHKLGRACSKFKDPPRIMQSDDYFARKFKAINGNMGPTTSLTASSSNESGGPANGTPAVPKMGVRARVSEWPPKKDCSKELTCKTLWESRSQTSYESVTSIIHNGQNDGSEGQQEEPLDLDFVEAKYTIGDIFVHSPQRGLHPIRQRSNSDVTISDIDAEDVLDQNAVNPNTGAALHREYGSTSSIDRQGLSGENFFAMLRGYRLENYDHKAMAPFGFPEFFPCDPAISPSLHAAAQISRGEFVRISGLDYMDSALLLGRDRDKPFKRRLKSESVETSLFRKLRAVKSEHETFKFACELEDGRLERGVRPWNCQRCFAHYDVQSILFNINEAMATRANVGKRKNITTGASAASQTQMPAGPQGSCDSPLGSKEDLNSKENLDADEGDGKSNDLVLSCPYFRNETGGEGDRRIALSRANSSSFSSGESCSFESSLSSHCTNAGVSVLEVPRENQPIHREKVKRYVIEHIDLGAYYYRKFFYGKEHQNYFGIDENLGPVAVSVRREKVEDPKEKEGSQFNYRVVFRTSELTTLRGAILEDAIPSTARHGTARGLPLKEVLEYVIPELSIQCLRQASSSPKVSEQLLKLDEQGLSFQHKIGILYCKAGQSTEEEMYNNETAGPAFEEFLDLLGQRVRLKGFSKYRAQLDNKTDSTGTHSLYTTYKDYELMFHVCTMLPHTPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPKSIRSHFQHVFVIVKVHNPCTENVCYSVGVSRSKDVPPFGPPIPKGVTFPKSAVFRDFLLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAENFVTTATVDTSAKFSFITLGAKKKEKVKPRKDAHLFSVGAIMWHVVARDFGQSADIECLLGVSNEFIMLIEKDSKNVVFNCSCRDVIGWTSGLMSIKVFYERGECILLSSVDSCAEDVREIVQRLGIVTRGCETVEMTLRRNGLGQLGFHVNFEGIVADVEPFGFAWKAGLRQGSRLVEICKVAVATLTHEQMIDLLRTSVTVKVVIIQPHDDGSPRRGCSELCRIPMVEYKLDSEGAPCEYKTPFRRNTTWHRVPTPALQPLPRVSPVPSTPDRLQCQPLLPQSQAAIPRSTSFDRKLPDGTRSSPSNQSSSSDPGPGSSGPWRPQVGYDGCQSPLLLEHQGSGPLECDGAREREDTVEGSRHAETKWHGPPSKVLSSYKERGLQKDGGCKDSPNKLSHIGDKSCSSHSSSNTLSSNTSSNSDDKHFGSGDLMDPELLGLTYIKGASTDSGIDTAPCMPAAVLGPVHLAGSRSLVHGRAEQWADSDIPGPDDEQAKMYAVHGYAPGISTSGAANGSLGDLSEISSHSSGSHHSGSPSAHCSKSSGSLDTSKVYIVSHGSGQQAPGSMSKAYHRQAAVNKYIIGWKKSEDSPPPEEPEVAECQGLYSEMDLLSSAAQQQAVVGDAVSETQHVLSKEDFLKLMLPDSPSVEEGRRKFSFYGNLSPRRSLYRTLSDESICSHRRGSSFGSSRSSILDQALPNDILFSTTPPYHSTLPPRTQPVPSVGSLRNEFWFSDGSLSDKSKCADPGLMPLPDTATGLDWTHLVDAARAFEGLDSDEELGLLCHHTSYLDQRVASFCTLTDMHPEQDLEGAQELPLCVDPGSGKDFMDPAGERSPSTLTGKVNQLELILRQLQTDLRKEKQDKAVLQAEVQHLRQDNLRLQEESQTAAAQLRKFTEWFFNTIDKKP
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5235684..5235830,5239044..5239125,5240267..5240390,5240913..5240966,5253289..5253420,5261216..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352445))
location: region:5235684-5352445:-1
so has part: feature:5350969-5352445:-1:exon
so has part: feature:5332001-5332134:-1:exon
so has part: feature:5330072-5330260:-1:exon
so has part: feature:5322202-5322376:-1:exon
so has part: feature:5317209-5317312:-1:exon
so has part: feature:5306655-5306812:-1:exon
so has part: feature:5302772-5303348:-1:exon
so has part: feature:5298500-5298774:-1:exon
so has part: feature:5283676-5283933:-1:exon
so has part: feature:5281540-5281623:-1:exon
so has part: feature:5279779-5279879:-1:exon
so has part: feature:5279318-5279421:-1:exon
so has part: feature:5277253-5277638:-1:exon
so has part: feature:5268811-5269035:-1:exon
so has part: feature:5263635-5263788:-1:exon
so has part: feature:5261216-5261435:-1:exon
so has part: feature:5253289-5253420:-1:exon
so has part: feature:5240913-5240966:-1:exon
so has part: feature:5240267-5240390:-1:exon
so has part: feature:5239044-5239125:-1:exon
so has part: feature:5235684-5235830:-1:exon

XP_027386865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5350969-5352445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5332001-5332134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5330072-5330260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5322202-5322376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5317209-5317312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306655-5306812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5302772-5303348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5298500-5298774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5283676-5283933:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5281540-5281623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5279779-5279879:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5279318-5279421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5277253-5277638:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5268811-5269035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5263635-5263788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5261216-5261435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5253289-5253420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5240913-5240966:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5240267-5240390:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5239044-5239125:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5235684-5235830:-1:exon

SIPA1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SIPA1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 2 isoform X4
translation: MSDPRQSQEEKHKLGRACSKFKDPPRIMQSDDYFARKFKAINGNMGPTTSLTASSSNESGGPANGTPAVPKMGVRARVSEWPPKKDCSKELTCKTLWESRSQTSYESVTSIIHNGQNDGSEGQQEEPLDLDFVEAKYTIGDIFVHSPQRGLHPIRQRSNSDVTISDIDAEDVLDQNAVNPNTGAALHREYGSTSSIDRQGLSGENFFAMLRGYRLENYDHKAMAPFGFPEFFPCDPAISPSLHAAAQISRGEFVRISGLDYMDSALLLGRDRDKPFKRRLKSESVETSLFRKLRAVKSEHETFKFACELEDGRLERGVRPWNCQRCFAHYDVQSILFNINEAMATRANVGKRKNITTGASAASQTQMPAGPQGSCDSPLGSKEDLNSKENLDADEGDGKSNDLVLSCPYFRNETGGEGDRRIALSRANSSSFSSGESCSFESSLSSHCTNAGVSVLEVPRENQPIHREKVKRYVIEHIDLGAYYYRKFFYGKEHQNYFGIDENLGPVAVSVRREKVEDPKEKEGSQFNYRVVFRTSELTTLRGAILEDAIPSTARHGTARGLPLKEVLEYVIPELSIQCLRQASSSPKVSEQLLKLDEQGLSFQHKIGILYCKAGQSTEEEMYNNETAGPAFEEFLDLLGQRVRLKGFSKYRAQLDNKTDSTGTHSLYTTYKDYELMFHVCTMLPHTPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPKSIRSHFQHVFVIVKVHNPCTENVCYSVGVSRSKDVPPFGPPIPKGVTFPKSAVFRDFLLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAENFVTTATVDTSAKFSFITLGAKKKEKVKPRKDAHLFSVGAIMWHVVARDFGQSADIECLLGVSNEFIMLIEKDSKNVVFNCSCRDVIGWTSGLMSIKVFYERGECILLSSVDSCAEDVREIVQRLGIVTRGCETVEMTLRRNGLGQLGFHVNFEGIVADVEPFGFAWKAGLRQGSRLVEICKVAVATLTHEQMIDLLRTSVTVKVVIIQPHDDGSPRRGCSELCRIPMVEYKLDSEGAPCEYKTPFRRNTTWHRVPTPALQPLPRVSPVPSTPDRLQCQPLLPQSQAAIPRSTSFDRKLPDGTRSSPSNQSSSSDPGPGSSGPWRPQVGYDGCQSPLLLEHQGSGPLECDGAREREDTVEGSRHAETKWHGPPSKVLSSYKERGLQKDGGCKDSPNKLSHIGDKSCSSHSSSNTLSSNTSSNSDDKHFGSGDLMDPELLGLTYIKGASTDSGIDTAPCMPAAVLGPVHLAGSRSLVHGRAEQWADSDIPGPDDEQAKMYAVHGYAPGISTSGAANGSLGDLSEISSHSSGSHHSGSPSAHCSKSSGSLDTSKVYIVSHGSGQQAPGSMSKAYHRQAAVNKYIIGWKKSEDSPPPEEPEVAECQGLYSEMDLLSSAAQQQAVVGDAVSETQHVLSKEDFLKLMLPDSPSVEEGRRKFSFYGNLSPRRSLYRTLSDESICSHRRGSSFGSSRSSILDQALPNDILFSTTPPYHSTLPPRTQPVPSVGSLRSECLGRTAPASRALWDEFWFSDGSLSDKSKCADPGLMPLPDTATGLDWTHLVDAARAFEDQRVASFCTLTDMHPEQDLEGAQELPLCVDPGSGKDFMDPAGERSPSTLTGKVNQLELILRQLQTDLRKEKQDKAVLQAEVQHLRQDNLRLQEESQTAAAQLRKFTEWFFNTIDKKP
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5235684..5235830,5239044..5239125,5240267..5240390,5253289..5253420,5261171..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352445))
location: region:5235684-5352445:-1
so has part: feature:5350969-5352445:-1:exon
so has part: feature:5332001-5332134:-1:exon
so has part: feature:5330072-5330260:-1:exon
so has part: feature:5322202-5322376:-1:exon
so has part: feature:5317209-5317312:-1:exon
so has part: feature:5306655-5306812:-1:exon
so has part: feature:5302772-5303348:-1:exon
so has part: feature:5298500-5298774:-1:exon
so has part: feature:5283676-5283933:-1:exon
so has part: feature:5281540-5281623:-1:exon
so has part: feature:5279779-5279879:-1:exon
so has part: feature:5279318-5279421:-1:exon
so has part: feature:5277253-5277638:-1:exon
so has part: feature:5268811-5269035:-1:exon
so has part: feature:5263635-5263788:-1:exon
so has part: feature:5261171-5261435:-1:exon
so has part: feature:5253289-5253420:-1:exon
so has part: feature:5240267-5240390:-1:exon
so has part: feature:5239044-5239125:-1:exon
so has part: feature:5235684-5235830:-1:exon

XP_027386867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5350969-5352445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5332001-5332134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5330072-5330260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5322202-5322376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5317209-5317312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306655-5306812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5302772-5303348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5298500-5298774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5283676-5283933:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5281540-5281623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5279779-5279879:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5279318-5279421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5277253-5277638:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5268811-5269035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5263635-5263788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5261171-5261435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5253289-5253420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5240267-5240390:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5239044-5239125:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5235684-5235830:-1:exon

SIPA1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SIPA1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 2 isoform X1
translation: MSDPRQSQEEKHKLGRACSKFKDPPRIMQSDDYFARKFKAINGNMGPTTSLTASSSNESGGPANGTPAVPKMGVRARVSEWPPKKDCSKELTCKTLWESRSQTSYESVTSIIHNGQNDGSEGQQEEPLDLDFVEAKYTIGDIFVHSPQRGLHPIRQRSNSDVTISDIDAEDVLDQNAVNPNTGAALHREYGSTSSIDRQGLSGENFFAMLRGYRLENYDHKAMAPFGFPEFFPCDPAISPSLHAAAQISRGEFVRISGLDYMDSALLLGRDRDKPFKRRLKSESVETSLFRKLRAVKSEHETFKFACELEDGRLERGVRPWNCQRCFAHYDVQSILFNINEAMATRANVGKRKNITTGASAASQTQMPAGPQGSCDSPLGSKEDLNSKENLDADEGDGKSNDLVLSCPYFRNETGGEGDRRIALSRANSSSFSSGESCSFESSLSSHCTNAGVSVLEVPRENQPIHREKVKRYVIEHIDLGAYYYRKFFYGKEHQNYFGIDENLGPVAVSVRREKVEDPKEKEGSQFNYRVVFRTSELTTLRGAILEDAIPSTARHGTARGLPLKEVLEYVIPELSIQCLRQASSSPKVSEQLLKLDEQGLSFQHKIGILYCKAGQSTEEEMYNNETAGPAFEEFLDLLGQRVRLKGFSKYRAQLDNKTDSTGTHSLYTTYKDYELMFHVCTMLPHTPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPKSIRSHFQHVFVIVKVHNPCTENVCYSVGVSRSKDVPPFGPPIPKGVTFPKSAVFRDFLLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAENFVTTATVDTSAKFSFITLGAKKKEKVKPRKDAHLFSVGAIMWHVVARDFGQSADIECLLGVSNEFIMLIEKDSKNVVFNCSCRDVIGWTSGLMSIKVFYERGECILLSSVDSCAEDVREIVQRLGIVTRGCETVEMTLRRNGLGQLGFHVNFEGIVADVEPFGFAWKAGLRQGSRLVEICKVAVATLTHEQMIDLLRTSVTVKVVIIQPHDDGSPRRGCSELCRIPMVEYKLDSEGAPCEYKTPFRRNTTWHRVPTPALQPLPRVSPVPSTPDRLQCQPLLPQSQAAIPRSTSFDRKLPDGTRSSPSNQSSSSDPGPGSSGPWRPQVGYDGCQSPLLLEHQGSGPLECDGAREREDTVEGSRHAETKWHGPPSKVLSSYKERGLQKDGGCKDSPNKLSHIGDKSCSSHSSSNTLSSNTSSNSDDKHFGSGDLMDPELLGLTYIKGASTDSGIDTAPCMPAAVLGPVHLAGSRSLVHGRAEQWADSDIPGPDDEQAKMYAVHGYAPGISTSGAANGSLGDLSEISSHSSGSHHSGSPSAHCSKSSGSLDTSKVYIVSHGSGQQAPGSMSKAYHRQAAVNKYIIGWKKSEDSPPPEEPEVAECQGLYSEMDLLSSAAQQQAVVGDAVSETQHVLSKEDFLKLMLPDSPSVEEGRRKFSFYGNLSPRRSLYRTLSDESICSHRRGSSFGSSRSSILDQALPNDILFSTTPPYHSTLPPRTQPVPSVGSLRSECLGRTAPASRALWDEFWFSDGSLSDKSKCADPGLMPLPDTATGLDWTHLVDAARAFEGLDSDEELGLLCHHTSYLDQRVASFCTLTDMHPEQDLEGAQELPLCVDPGSGKDFMDPAGERSPSTLTGKVNQLELILRQLQTDLRKEKQDKAVLQAEVQHLRQDNLRLQEESQTAAAQLRKFTEWFFNTIDKKP
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5235684..5235830,5239044..5239125,5240267..5240390,5240913..5240966,5253289..5253420,5261171..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352445))
location: region:5235684-5352445:-1
so has part: feature:5350969-5352445:-1:exon
so has part: feature:5332001-5332134:-1:exon
so has part: feature:5330072-5330260:-1:exon
so has part: feature:5322202-5322376:-1:exon
so has part: feature:5317209-5317312:-1:exon
so has part: feature:5306655-5306812:-1:exon
so has part: feature:5302772-5303348:-1:exon
so has part: feature:5298500-5298774:-1:exon
so has part: feature:5283676-5283933:-1:exon
so has part: feature:5281540-5281623:-1:exon
so has part: feature:5279779-5279879:-1:exon
so has part: feature:5279318-5279421:-1:exon
so has part: feature:5277253-5277638:-1:exon
so has part: feature:5268811-5269035:-1:exon
so has part: feature:5263635-5263788:-1:exon
so has part: feature:5261171-5261435:-1:exon
so has part: feature:5253289-5253420:-1:exon
so has part: feature:5240913-5240966:-1:exon
so has part: feature:5240267-5240390:-1:exon
so has part: feature:5239044-5239125:-1:exon
so has part: feature:5235684-5235830:-1:exon

XP_027386861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5350969-5352445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5332001-5332134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5330072-5330260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5322202-5322376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5317209-5317312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306655-5306812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5302772-5303348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5298500-5298774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5283676-5283933:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5281540-5281623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5279779-5279879:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5279318-5279421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5277253-5277638:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5268811-5269035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5263635-5263788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5261171-5261435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5253289-5253420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5240913-5240966:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5240267-5240390:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5239044-5239125:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5235684-5235830:-1:exon

SIPA1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SIPA1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 2 isoform X1
translation: MSDPRQSQEEKHKLGRACSKFKDPPRIMQSDDYFARKFKAINGNMGPTTSLTASSSNESGGPANGTPAVPKMGVRARVSEWPPKKDCSKELTCKTLWESRSQTSYESVTSIIHNGQNDGSEGQQEEPLDLDFVEAKYTIGDIFVHSPQRGLHPIRQRSNSDVTISDIDAEDVLDQNAVNPNTGAALHREYGSTSSIDRQGLSGENFFAMLRGYRLENYDHKAMAPFGFPEFFPCDPAISPSLHAAAQISRGEFVRISGLDYMDSALLLGRDRDKPFKRRLKSESVETSLFRKLRAVKSEHETFKFACELEDGRLERGVRPWNCQRCFAHYDVQSILFNINEAMATRANVGKRKNITTGASAASQTQMPAGPQGSCDSPLGSKEDLNSKENLDADEGDGKSNDLVLSCPYFRNETGGEGDRRIALSRANSSSFSSGESCSFESSLSSHCTNAGVSVLEVPRENQPIHREKVKRYVIEHIDLGAYYYRKFFYGKEHQNYFGIDENLGPVAVSVRREKVEDPKEKEGSQFNYRVVFRTSELTTLRGAILEDAIPSTARHGTARGLPLKEVLEYVIPELSIQCLRQASSSPKVSEQLLKLDEQGLSFQHKIGILYCKAGQSTEEEMYNNETAGPAFEEFLDLLGQRVRLKGFSKYRAQLDNKTDSTGTHSLYTTYKDYELMFHVCTMLPHTPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPKSIRSHFQHVFVIVKVHNPCTENVCYSVGVSRSKDVPPFGPPIPKGVTFPKSAVFRDFLLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAENFVTTATVDTSAKFSFITLGAKKKEKVKPRKDAHLFSVGAIMWHVVARDFGQSADIECLLGVSNEFIMLIEKDSKNVVFNCSCRDVIGWTSGLMSIKVFYERGECILLSSVDSCAEDVREIVQRLGIVTRGCETVEMTLRRNGLGQLGFHVNFEGIVADVEPFGFAWKAGLRQGSRLVEICKVAVATLTHEQMIDLLRTSVTVKVVIIQPHDDGSPRRGCSELCRIPMVEYKLDSEGAPCEYKTPFRRNTTWHRVPTPALQPLPRVSPVPSTPDRLQCQPLLPQSQAAIPRSTSFDRKLPDGTRSSPSNQSSSSDPGPGSSGPWRPQVGYDGCQSPLLLEHQGSGPLECDGAREREDTVEGSRHAETKWHGPPSKVLSSYKERGLQKDGGCKDSPNKLSHIGDKSCSSHSSSNTLSSNTSSNSDDKHFGSGDLMDPELLGLTYIKGASTDSGIDTAPCMPAAVLGPVHLAGSRSLVHGRAEQWADSDIPGPDDEQAKMYAVHGYAPGISTSGAANGSLGDLSEISSHSSGSHHSGSPSAHCSKSSGSLDTSKVYIVSHGSGQQAPGSMSKAYHRQAAVNKYIIGWKKSEDSPPPEEPEVAECQGLYSEMDLLSSAAQQQAVVGDAVSETQHVLSKEDFLKLMLPDSPSVEEGRRKFSFYGNLSPRRSLYRTLSDESICSHRRGSSFGSSRSSILDQALPNDILFSTTPPYHSTLPPRTQPVPSVGSLRSECLGRTAPASRALWDEFWFSDGSLSDKSKCADPGLMPLPDTATGLDWTHLVDAARAFEGLDSDEELGLLCHHTSYLDQRVASFCTLTDMHPEQDLEGAQELPLCVDPGSGKDFMDPAGERSPSTLTGKVNQLELILRQLQTDLRKEKQDKAVLQAEVQHLRQDNLRLQEESQTAAAQLRKFTEWFFNTIDKKP
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5235684..5235830,5239044..5239125,5240267..5240390,5240913..5240966,5253289..5253420,5261171..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352445))
location: region:5235684-5352445:-1
so has part: feature:5350969-5352445:-1:exon
so has part: feature:5332001-5332134:-1:exon
so has part: feature:5330072-5330260:-1:exon
so has part: feature:5322202-5322376:-1:exon
so has part: feature:5317209-5317312:-1:exon
so has part: feature:5306655-5306812:-1:exon
so has part: feature:5302772-5303348:-1:exon
so has part: feature:5298500-5298774:-1:exon
so has part: feature:5283676-5283933:-1:exon
so has part: feature:5281540-5281623:-1:exon
so has part: feature:5279779-5279879:-1:exon
so has part: feature:5279318-5279421:-1:exon
so has part: feature:5277253-5277638:-1:exon
so has part: feature:5268811-5269035:-1:exon
so has part: feature:5263635-5263788:-1:exon
so has part: feature:5261171-5261435:-1:exon
so has part: feature:5253289-5253420:-1:exon
so has part: feature:5240913-5240966:-1:exon
so has part: feature:5240267-5240390:-1:exon
so has part: feature:5239044-5239125:-1:exon
so has part: feature:5235684-5235830:-1:exon

XP_027386862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5350969-5352445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5332001-5332134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5330072-5330260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5322202-5322376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5317209-5317312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306655-5306812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5302772-5303348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5298500-5298774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5283676-5283933:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5281540-5281623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5279779-5279879:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5279318-5279421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5277253-5277638:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5268811-5269035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5263635-5263788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5261171-5261435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5253289-5253420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5240913-5240966:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5240267-5240390:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5239044-5239125:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5235684-5235830:-1:exon

SIPA1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SIPA1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal-induced proliferation-associated 1-like protein 2 isoform X1
translation: MSDPRQSQEEKHKLGRACSKFKDPPRIMQSDDYFARKFKAINGNMGPTTSLTASSSNESGGPANGTPAVPKMGVRARVSEWPPKKDCSKELTCKTLWESRSQTSYESVTSIIHNGQNDGSEGQQEEPLDLDFVEAKYTIGDIFVHSPQRGLHPIRQRSNSDVTISDIDAEDVLDQNAVNPNTGAALHREYGSTSSIDRQGLSGENFFAMLRGYRLENYDHKAMAPFGFPEFFPCDPAISPSLHAAAQISRGEFVRISGLDYMDSALLLGRDRDKPFKRRLKSESVETSLFRKLRAVKSEHETFKFACELEDGRLERGVRPWNCQRCFAHYDVQSILFNINEAMATRANVGKRKNITTGASAASQTQMPAGPQGSCDSPLGSKEDLNSKENLDADEGDGKSNDLVLSCPYFRNETGGEGDRRIALSRANSSSFSSGESCSFESSLSSHCTNAGVSVLEVPRENQPIHREKVKRYVIEHIDLGAYYYRKFFYGKEHQNYFGIDENLGPVAVSVRREKVEDPKEKEGSQFNYRVVFRTSELTTLRGAILEDAIPSTARHGTARGLPLKEVLEYVIPELSIQCLRQASSSPKVSEQLLKLDEQGLSFQHKIGILYCKAGQSTEEEMYNNETAGPAFEEFLDLLGQRVRLKGFSKYRAQLDNKTDSTGTHSLYTTYKDYELMFHVCTMLPHTPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPKSIRSHFQHVFVIVKVHNPCTENVCYSVGVSRSKDVPPFGPPIPKGVTFPKSAVFRDFLLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAENFVTTATVDTSAKFSFITLGAKKKEKVKPRKDAHLFSVGAIMWHVVARDFGQSADIECLLGVSNEFIMLIEKDSKNVVFNCSCRDVIGWTSGLMSIKVFYERGECILLSSVDSCAEDVREIVQRLGIVTRGCETVEMTLRRNGLGQLGFHVNFEGIVADVEPFGFAWKAGLRQGSRLVEICKVAVATLTHEQMIDLLRTSVTVKVVIIQPHDDGSPRRGCSELCRIPMVEYKLDSEGAPCEYKTPFRRNTTWHRVPTPALQPLPRVSPVPSTPDRLQCQPLLPQSQAAIPRSTSFDRKLPDGTRSSPSNQSSSSDPGPGSSGPWRPQVGYDGCQSPLLLEHQGSGPLECDGAREREDTVEGSRHAETKWHGPPSKVLSSYKERGLQKDGGCKDSPNKLSHIGDKSCSSHSSSNTLSSNTSSNSDDKHFGSGDLMDPELLGLTYIKGASTDSGIDTAPCMPAAVLGPVHLAGSRSLVHGRAEQWADSDIPGPDDEQAKMYAVHGYAPGISTSGAANGSLGDLSEISSHSSGSHHSGSPSAHCSKSSGSLDTSKVYIVSHGSGQQAPGSMSKAYHRQAAVNKYIIGWKKSEDSPPPEEPEVAECQGLYSEMDLLSSAAQQQAVVGDAVSETQHVLSKEDFLKLMLPDSPSVEEGRRKFSFYGNLSPRRSLYRTLSDESICSHRRGSSFGSSRSSILDQALPNDILFSTTPPYHSTLPPRTQPVPSVGSLRSECLGRTAPASRALWDEFWFSDGSLSDKSKCADPGLMPLPDTATGLDWTHLVDAARAFEGLDSDEELGLLCHHTSYLDQRVASFCTLTDMHPEQDLEGAQELPLCVDPGSGKDFMDPAGERSPSTLTGKVNQLELILRQLQTDLRKEKQDKAVLQAEVQHLRQDNLRLQEESQTAAAQLRKFTEWFFNTIDKKP
SIO_010081: SIPA1L2
subclass of: SO_0000673
so part of: SIPA1L2
location: complement(join(5235684..5235830,5239044..5239125,5240267..5240390,5240913..5240966,5253289..5253420,5261171..5261435,5263635..5263788,5268811..5269035,5277253..5277638,5279318..5279421,5279779..5279879,5281540..5281623,5283676..5283933,5298500..5298774,5302772..5303348,5306655..5306812,5317209..5317312,5322202..5322376,5330072..5330260,5332001..5332134,5350969..5352445))
location: region:5235684-5352445:-1
so has part: feature:5350969-5352445:-1:exon
so has part: feature:5332001-5332134:-1:exon
so has part: feature:5330072-5330260:-1:exon
so has part: feature:5322202-5322376:-1:exon
so has part: feature:5317209-5317312:-1:exon
so has part: feature:5306655-5306812:-1:exon
so has part: feature:5302772-5303348:-1:exon
so has part: feature:5298500-5298774:-1:exon
so has part: feature:5283676-5283933:-1:exon
so has part: feature:5281540-5281623:-1:exon
so has part: feature:5279779-5279879:-1:exon
so has part: feature:5279318-5279421:-1:exon
so has part: feature:5277253-5277638:-1:exon
so has part: feature:5268811-5269035:-1:exon
so has part: feature:5263635-5263788:-1:exon
so has part: feature:5261171-5261435:-1:exon
so has part: feature:5253289-5253420:-1:exon
so has part: feature:5240913-5240966:-1:exon
so has part: feature:5240267-5240390:-1:exon
so has part: feature:5239044-5239125:-1:exon
so has part: feature:5235684-5235830:-1:exon

XP_027386863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5350969-5352445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5332001-5332134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5330072-5330260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5322202-5322376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5317209-5317312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5306655-5306812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5302772-5303348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5298500-5298774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5283676-5283933:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5281540-5281623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5279779-5279879:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5279318-5279421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5277253-5277638:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5268811-5269035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5263635-5263788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5261171-5261435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5253289-5253420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5240913-5240966:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5240267-5240390:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5239044-5239125:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5235684-5235830:-1:exon

TRNAG-UCC
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TRNAG-UCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5401664..5401736
location: region:5401664-5401736:1
so has part: feature:5401664-5401736:1:exon
subclass of: SO_0000663

113885659
type: Gene
SIO_000068: ncbigene

position:5401664:1
position: 5401664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5401736:1
position: 5401736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5401664-5401736:1:exon

TRNAG-UCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30522
gene: TRNAG-UCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5401697..5401699,aa:Gly,seq:tcc)
SIO_010081: TRNAG-UCC
subclass of: SO_0000673
so part of: TRNAG-UCC
location: 5401664..5401736
location: region:5401664-5401736:1
so has part: feature:5401664-5401736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5401664-5401736:1:exon

LOC113885644
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885644
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5571116..5571217
location: region:5571116-5571217:1
so has part: feature:5571116-5571217:1:exon
subclass of: SO_0000623

113885644
type: Gene
SIO_000068: ncbigene

position:5571116:1
position: 5571116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5571217:1
position: 5571217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5571116-5571217:1:exon

LOC113885644
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: snRNA
gene: LOC113885644
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509294.1
SIO_010081: LOC113885644
subclass of: SO_0000673
so part of: LOC113885644
location: 5571116..5571217
location: region:5571116-5571217:1
so has part: feature:5571116-5571217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5571116-5571217:1:exon

MAP10
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: MAP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5690242..5695166
location: region:5690242-5695166:1
so has part: feature:5690242-5695166:1:exon
subclass of: SO_0000010

113885416
type: Gene
SIO_000068: ncbigene

position:5690242:1
position: 5690242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5695166:1
position: 5695166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5690242-5695166:1:exon

MAP10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: MAP10
product: microtubule associated protein 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027530736.1
SIO_010081: MAP10
subclass of: SO_0000673
so part of: MAP10
location: 5690242..5695166
location: region:5690242-5695166:1
so has part: feature:5690242-5695166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5690242-5695166:1:exon

MAP10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: MAP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein 10
translation: MASAVSERLFSLELLVDWVCLEAGLPQPPVVAEEEQKEEGEGASPPRPSRSLCPAVAFRLLDFPTLLIYPPAGPAAPAQESRPGLVSFRRGKSCLFRLQPATLHRLLLRTPLYTLLLQLPPGHPTPAPQLLGACSISLAAAVHKVLGFAAPGSSQSHRGSFPLCNRDGERIGDIALGYRLSDLGSSLLGHLERPVASPGGGVEGMEVQKSVEVSPQTWQENQQLQQPDSEPSPGDADKPLVDVKISRAGKDLKGRAFHSKADSDYTDSMENGKTNSDMCSKGSSERSVSPPNQEGTEVELETNIICPPPLYYTHLTQEKTPPKQGKITIEPQINASEEWDDGTFLKENVNPPTHTNPPEHTNSATGESCSVLINPASVQDTGASNQTTDHPPTEQNRINTIRQLPLLNALLVELSLLYNQPMANPTHIHPHLAWLYRTEDKKSPESSVKSTCKSESKKDKLSVGENEKSVSLQYKKNQTENLKKGKYFEKKGGAPQKRVSRGKLLYGLTNTLKLRLKQTNPDMLVEYEKKEQYKKMQTQMLGAKLRIPSSKVKILSFAELYQKPHELPKDKCLESDASFAENSNTSKQISAVVDDPSTTTETKLNCATEKTVDCHENRSNNGFLGEILTPANSVVSERFICTNTLEGKVFGRKSIQSPGVFQQVAVVDRTVVDKEIDDKQVKITGDDILTVDINEKNPSTSSCSESISELKYSDDFTSPCSSEDTSRILRACDSSPGTENPKNSQHTSTSSETRLSIRKNSSAKSSILSPPFSAGSPVLSHKRFPVSKTQDKSLEEASSSDFSSSQWTEEKENQRDQNSMHNSKVIKQDHDISAKPKTRTGCKSSEKSQSPRTSQVSSYLPSNLSELELNVLDCSTLDHFEEDCDDLGSLNISKQCKDICELVINKLPGYTV
SIO_010081: MAP10
subclass of: SO_0000673
so part of: MAP10
location: 5690308..5693046
location: region:5690308-5693046:1
so has part: feature:5690308-5693046:1:exon

XP_027386537.1
type: Protein
SIO_000068: ncbiprotein

position:5690308:1
position: 5690308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5693046:1
position: 5693046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5690308-5693046:1:exon

NTPCR
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: NTPCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5846209..5884552
location: region:5846209-5884552:1
so has part: feature:5846209-5884552:1:exon
subclass of: SO_0000010

113885309
type: Gene
SIO_000068: ncbigene

position:5846209:1
position: 5846209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5884552:1
position: 5884552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5846209-5884552:1:exon

NTPCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: NTPCR
product: nucleoside-triphosphatase, cancer-related, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 214 samples with support for all annotated introns
transcript id: XM_027530533.1
SIO_010081: NTPCR
subclass of: SO_0000673
so part of: NTPCR
location: join(5846209..5846397,5852014..5852176,5852803..5852899,5873769..5873978,5883907..5884552)
location: region:5846209-5884552:1
so has part: feature:5846209-5846397:1:exon
so has part: feature:5852014-5852176:1:exon
so has part: feature:5852803-5852899:1:exon
so has part: feature:5873769-5873978:1:exon
so has part: feature:5883907-5884552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5846209-5846397:1:exon

position:5846397:1
position: 5846397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5852014-5852176:1:exon

position:5852014:1
position: 5852014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5852176:1
position: 5852176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5852803-5852899:1:exon

position:5852803:1
position: 5852803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5852899:1
position: 5852899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5873769-5873978:1:exon

position:5873769:1
position: 5873769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5873978:1
position: 5873978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5883907-5884552:1:exon

position:5883907:1
position: 5883907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NTPCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: NTPCR
product: nucleoside-triphosphatase, cancer-related, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 143 samples with support for all annotated introns
transcript id: XM_027530536.1
SIO_010081: NTPCR
subclass of: SO_0000673
so part of: NTPCR
location: join(5846209..5846397,5852014..5852176,5852803..5852899,5883907..5884552)
location: region:5846209-5884552:1
so has part: feature:5846209-5846397:1:exon
so has part: feature:5852014-5852176:1:exon
so has part: feature:5852803-5852899:1:exon
so has part: feature:5883907-5884552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5846209-5846397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5852014-5852176:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5852803-5852899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5883907-5884552:1:exon

NTPCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: NTPCR
product: nucleoside-triphosphatase, cancer-related, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 133 samples with support for all annotated introns
transcript id: XM_027530535.1
SIO_010081: NTPCR
subclass of: SO_0000673
so part of: NTPCR
location: join(5846218..5846397,5846512..5846568,5852014..5852176,5852803..5852899,5873769..5873978,5883907..5884552)
location: region:5846218-5884552:1
so has part: feature:5846218-5846397:1:exon
so has part: feature:5846512-5846568:1:exon
so has part: feature:5852014-5852176:1:exon
so has part: feature:5852803-5852899:1:exon
so has part: feature:5873769-5873978:1:exon
so has part: feature:5883907-5884552:1:exon

position:5846218:1
position: 5846218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5846218-5846397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5846512-5846568:1:exon

position:5846512:1
position: 5846512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5846568:1
position: 5846568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5852014-5852176:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5852803-5852899:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5873769-5873978:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5883907-5884552:1:exon

NTPCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: NTPCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cancer-related nucleoside-triphosphatase isoform X1
translation: MARHVFLTGPPGVGKTTLIQKATEVLKSSGMPVDGFYTEEVRQGGRRIGFDVVTLSGIRGPLSRIGSEPLPGKRECRVGQYVVDLTSFEQLALPVLRNAGASGRPGQSICVIDEVGKMELFSQPFIQAVRQVLSTPGTVVLGTIPVPKGKPLALVEEIRTRKDVKVFSVTKENRNHLLPEIVTHMQSSRK
SIO_010081: NTPCR
subclass of: SO_0000673
so part of: NTPCR
location: join(5846364..5846397,5852014..5852176,5852803..5852899,5873769..5873978,5883907..5883975)
location: region:5846364-5883975:1
so has part: feature:5846364-5846397:1:exon
so has part: feature:5852014-5852176:1:exon
so has part: feature:5852803-5852899:1:exon
so has part: feature:5873769-5873978:1:exon
so has part: feature:5883907-5883975:1:exon

XP_027386334.1
type: Protein
SIO_000068: ncbiprotein

position:5846364:1
position: 5846364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5883975:1
position: 5883975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5846364-5846397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5852014-5852176:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5852803-5852899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5873769-5873978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5883907-5883975:1:exon

NTPCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: NTPCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cancer-related nucleoside-triphosphatase isoform X3
translation: MARHVFLTGPPGVGKTTLIQKATEVLKSSGMPVDGFYTEEVRQGGRRIGFDVVTLSGIRGPLSRIGSEPLPGKRECRVGQYVVDLTSFEQLALPVLRNVTKENRNHLLPEIVTHMQSSRK
SIO_010081: NTPCR
subclass of: SO_0000673
so part of: NTPCR
location: join(5846364..5846397,5852014..5852176,5852803..5852899,5883907..5883975)
location: region:5846364-5883975:1
so has part: feature:5846364-5846397:1:exon
so has part: feature:5852014-5852176:1:exon
so has part: feature:5852803-5852899:1:exon
so has part: feature:5883907-5883975:1:exon

XP_027386337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5846364-5846397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5852014-5852176:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5852803-5852899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5883907-5883975:1:exon

NTPCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: NTPCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cancer-related nucleoside-triphosphatase isoform X2
translation: MPVDGFYTEEVRQGGRRIGFDVVTLSGIRGPLSRIGSEPLPGKRECRVGQYVVDLTSFEQLALPVLRNAGASGRPGQSICVIDEVGKMELFSQPFIQAVRQVLSTPGTVVLGTIPVPKGKPLALVEEIRTRKDVKVFSVTKENRNHLLPEIVTHMQSSRK
SIO_010081: NTPCR
subclass of: SO_0000673
so part of: NTPCR
location: join(5852070..5852176,5852803..5852899,5873769..5873978,5883907..5883975)
location: region:5852070-5883975:1
so has part: feature:5852070-5852176:1:exon
so has part: feature:5852803-5852899:1:exon
so has part: feature:5873769-5873978:1:exon
so has part: feature:5883907-5883975:1:exon

XP_027386336.1
type: Protein
SIO_000068: ncbiprotein

position:5852070:1
position: 5852070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5852070-5852176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5852803-5852899:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5873769-5873978:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5883907-5883975:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5877115..5877186
location: region:5877115-5877186:1
so has part: feature:5877115-5877186:1:exon
subclass of: SO_0000663

113885670
type: Gene
SIO_000068: ncbigene

position:5877115:1
position: 5877115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5877186:1
position: 5877186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5877115-5877186:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30522
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5877147..5877149,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 5877115..5877186
location: region:5877115-5877186:1
so has part: feature:5877115-5877186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5877115-5877186:1:exon

PCNX2
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: PCNX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5889192..6227567)
location: region:5889192-6227567:-1
so has part: feature:5889192-6227567:-1:exon
subclass of: SO_0000010

113885325
type: Gene
SIO_000068: ncbigene

position:5889192:-1
position: 5889192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6227567:-1
position: 6227567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5889192-6227567:-1:exon

PCNX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: PCNX2
product: pecanex 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_027530589.1
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
location: complement(join(5889192..5890175,5891672..5892120,5907995..5908182,5909443..5909717,5910739..5910969,5911694..5911838,5931464..5931576,5933516..5933749,5943106..5943359,5958909..5959124,5963826..5963884,5990934..5991063,5996963..5997071,6055950..6056127,6060354..6060495,6082855..6083005,6083786..6083878,6097568..6097664,6099123..6099232,6128238..6128329,6129951..6130061,6140030..6140201,6152647..6152679,6152766..6152919,6163022..6163167,6168213..6168348,6186550..6186643,6189995..6190140,6190266..6190413,6200397..6201674,6203259..6203295,6203974..6204091,6205655..6205860,6227315..6227567))
location: region:5889192-6227567:-1
so has part: feature:6227315-6227567:-1:exon
so has part: feature:6205655-6205860:-1:exon
so has part: feature:6203974-6204091:-1:exon
so has part: feature:6203259-6203295:-1:exon
so has part: feature:6200397-6201674:-1:exon
so has part: feature:6190266-6190413:-1:exon
so has part: feature:6189995-6190140:-1:exon
so has part: feature:6186550-6186643:-1:exon
so has part: feature:6168213-6168348:-1:exon
so has part: feature:6163022-6163167:-1:exon
so has part: feature:6152766-6152919:-1:exon
so has part: feature:6152647-6152679:-1:exon
so has part: feature:6140030-6140201:-1:exon
so has part: feature:6129951-6130061:-1:exon
so has part: feature:6128238-6128329:-1:exon
so has part: feature:6099123-6099232:-1:exon
so has part: feature:6097568-6097664:-1:exon
so has part: feature:6083786-6083878:-1:exon
so has part: feature:6082855-6083005:-1:exon
so has part: feature:6060354-6060495:-1:exon
so has part: feature:6055950-6056127:-1:exon
so has part: feature:5996963-5997071:-1:exon
so has part: feature:5990934-5991063:-1:exon
so has part: feature:5963826-5963884:-1:exon
so has part: feature:5958909-5959124:-1:exon
so has part: feature:5943106-5943359:-1:exon
so has part: feature:5933516-5933749:-1:exon
so has part: feature:5931464-5931576:-1:exon
so has part: feature:5911694-5911838:-1:exon
so has part: feature:5910739-5910969:-1:exon
so has part: feature:5909443-5909717:-1:exon
so has part: feature:5907995-5908182:-1:exon
so has part: feature:5891672-5892120:-1:exon
so has part: feature:5889192-5890175:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6227315-6227567:-1:exon

position:6227315:-1
position: 6227315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6205655-6205860:-1:exon

position:6205655:-1
position: 6205655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6205860:-1
position: 6205860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6203974-6204091:-1:exon

position:6203974:-1
position: 6203974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6204091:-1
position: 6204091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6203259-6203295:-1:exon

position:6203259:-1
position: 6203259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6203295:-1
position: 6203295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6200397-6201674:-1:exon

position:6200397:-1
position: 6200397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6201674:-1
position: 6201674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6190266-6190413:-1:exon

position:6190266:-1
position: 6190266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6190413:-1
position: 6190413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6189995-6190140:-1:exon

position:6189995:-1
position: 6189995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6190140:-1
position: 6190140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6186550-6186643:-1:exon

position:6186550:-1
position: 6186550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6186643:-1
position: 6186643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6168213-6168348:-1:exon

position:6168213:-1
position: 6168213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6168348:-1
position: 6168348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6163022-6163167:-1:exon

position:6163022:-1
position: 6163022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6163167:-1
position: 6163167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6152766-6152919:-1:exon

position:6152766:-1
position: 6152766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6152919:-1
position: 6152919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6152647-6152679:-1:exon

position:6152647:-1
position: 6152647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6152679:-1
position: 6152679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6140030-6140201:-1:exon

position:6140030:-1
position: 6140030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6140201:-1
position: 6140201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6129951-6130061:-1:exon

position:6129951:-1
position: 6129951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6130061:-1
position: 6130061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6128238-6128329:-1:exon

position:6128238:-1
position: 6128238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6128329:-1
position: 6128329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6099123-6099232:-1:exon

position:6099123:-1
position: 6099123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6099232:-1
position: 6099232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6097568-6097664:-1:exon

position:6097568:-1
position: 6097568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6097664:-1
position: 6097664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6083786-6083878:-1:exon

position:6083786:-1
position: 6083786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6083878:-1
position: 6083878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6082855-6083005:-1:exon

position:6082855:-1
position: 6082855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6083005:-1
position: 6083005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6060354-6060495:-1:exon

position:6060354:-1
position: 6060354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6060495:-1
position: 6060495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6055950-6056127:-1:exon

position:6055950:-1
position: 6055950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6056127:-1
position: 6056127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5996963-5997071:-1:exon

position:5996963:-1
position: 5996963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5997071:-1
position: 5997071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5990934-5991063:-1:exon

position:5990934:-1
position: 5990934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5991063:-1
position: 5991063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5963826-5963884:-1:exon

position:5963826:-1
position: 5963826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5963884:-1
position: 5963884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:5958909-5959124:-1:exon

position:5958909:-1
position: 5958909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5959124:-1
position: 5959124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:5943106-5943359:-1:exon

position:5943106:-1
position: 5943106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5943359:-1
position: 5943359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:5933516-5933749:-1:exon

position:5933516:-1
position: 5933516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5933749:-1
position: 5933749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:5931464-5931576:-1:exon

position:5931464:-1
position: 5931464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5931576:-1
position: 5931576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:5911694-5911838:-1:exon

position:5911694:-1
position: 5911694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5911838:-1
position: 5911838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:5910739-5910969:-1:exon

position:5910739:-1
position: 5910739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5910969:-1
position: 5910969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:5909443-5909717:-1:exon

position:5909443:-1
position: 5909443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5909717:-1
position: 5909717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:5907995-5908182:-1:exon

position:5907995:-1
position: 5907995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5908182:-1
position: 5908182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:5891672-5892120:-1:exon

position:5891672:-1
position: 5891672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5892120:-1
position: 5892120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:5889192-5890175:-1:exon

position:5890175:-1
position: 5890175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCNX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: PCNX2
product: pecanex 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_027530588.1
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
location: complement(join(5889192..5890175,5891672..5892120,5907995..5908182,5909443..5909717,5910739..5910969,5911694..5911838,5931464..5931576,5933516..5933749,5943106..5943359,5958909..5959124,5963826..5963884,5990934..5991063,5996963..5997071,6055950..6056127,6060354..6060495,6082855..6083005,6083786..6083878,6097568..6097664,6099123..6099232,6128238..6128329,6129951..6130061,6140030..6140201,6152647..6152679,6152766..6152919,6163022..6163167,6167353..6167379,6168213..6168348,6186550..6186643,6189995..6190140,6190266..6190413,6200397..6201674,6203259..6203295,6203974..6204091,6205655..6205860,6227315..6227567))
location: region:5889192-6227567:-1
so has part: feature:6227315-6227567:-1:exon
so has part: feature:6205655-6205860:-1:exon
so has part: feature:6203974-6204091:-1:exon
so has part: feature:6203259-6203295:-1:exon
so has part: feature:6200397-6201674:-1:exon
so has part: feature:6190266-6190413:-1:exon
so has part: feature:6189995-6190140:-1:exon
so has part: feature:6186550-6186643:-1:exon
so has part: feature:6168213-6168348:-1:exon
so has part: feature:6167353-6167379:-1:exon
so has part: feature:6163022-6163167:-1:exon
so has part: feature:6152766-6152919:-1:exon
so has part: feature:6152647-6152679:-1:exon
so has part: feature:6140030-6140201:-1:exon
so has part: feature:6129951-6130061:-1:exon
so has part: feature:6128238-6128329:-1:exon
so has part: feature:6099123-6099232:-1:exon
so has part: feature:6097568-6097664:-1:exon
so has part: feature:6083786-6083878:-1:exon
so has part: feature:6082855-6083005:-1:exon
so has part: feature:6060354-6060495:-1:exon
so has part: feature:6055950-6056127:-1:exon
so has part: feature:5996963-5997071:-1:exon
so has part: feature:5990934-5991063:-1:exon
so has part: feature:5963826-5963884:-1:exon
so has part: feature:5958909-5959124:-1:exon
so has part: feature:5943106-5943359:-1:exon
so has part: feature:5933516-5933749:-1:exon
so has part: feature:5931464-5931576:-1:exon
so has part: feature:5911694-5911838:-1:exon
so has part: feature:5910739-5910969:-1:exon
so has part: feature:5909443-5909717:-1:exon
so has part: feature:5907995-5908182:-1:exon
so has part: feature:5891672-5892120:-1:exon
so has part: feature:5889192-5890175:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6227315-6227567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6205655-6205860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6203974-6204091:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6203259-6203295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6200397-6201674:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6190266-6190413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6189995-6190140:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6186550-6186643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6168213-6168348:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6167353-6167379:-1:exon

position:6167353:-1
position: 6167353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6167379:-1
position: 6167379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6163022-6163167:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6152766-6152919:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6152647-6152679:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6140030-6140201:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6129951-6130061:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6128238-6128329:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6099123-6099232:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6097568-6097664:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6083786-6083878:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6082855-6083005:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6060354-6060495:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6055950-6056127:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5996963-5997071:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5990934-5991063:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5963826-5963884:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5958909-5959124:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5943106-5943359:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5933516-5933749:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5931464-5931576:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5911694-5911838:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5910739-5910969:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5909443-5909717:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5907995-5908182:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5891672-5892120:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5889192-5890175:-1:exon

PCNX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: PCNX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pecanex-like protein 2 isoform X2
translation: MGSQVLQLLRQGVWAALTGGWYHDPDQSKFTNSCHLYLWLFLFLLPLALHLAFPPDAITVFLYCSSVTIFFTVIKLVSYRLHLMFDKGEVIQQRPSGKKEKPRKDKEANGDHITNHRNPSNNGQINSGKKEADRSLSTPPLHGSSGGQSINSHHSSGLLDLPAQETVEDLKGVVLSDDQPMAPVSSTSPAIKAESLPASKAPVLGAVTTSAIPLKPVVAETCISDQGKERGGRGQPPFHHRSEGGLVDKETVKKLPYLSLSQYDLLETDVSVQPWGSENSVLIPEPGHYASIRDKLQNKSPQDSLSSSCPQCNTVIARPVQGQVSQQVDSTLNQDVGDSDSEVAVTLIDTSQPGDPLSLHEPIRIVITMSSTPNSMTDLESSLHLKAVGTQPSGFQADAEPAPPGAASPLNVEQMRIPVITFQLSEDAGGMVCPESSGSGRTPERLTVEASSNPCSGYESGEGGSATQDHSPSPGDHCATPPTPNMVSESEVGMEAQANLDPSSCRTSQEKRHARVLSVDSGTDVFLSKSSAEIINDKEQTMPTSKSDLEAKEGQVPNESNFLEFVSLLESINTSKVVVSNQRNEPTEQNKDSRLPADNCSQEKKEEILESEKPSGPIAKQGKPDVQSQDHTSTSPGLTEPAKIPTLFQGNRQRQIIYRVTSQQDSSVLQVISGPETSVQDEMSVDAMHVFIDEHGEIKSCYLKSGNQKEGPFQHQPSNYEGFSHAGDLQISSSSTTTSESQDPSSGDPAVSALQQQLLLMVARRTQSETPRHLSQDLEDSSCSSTQGKFNREQFYKFIIFPGKWIKVWYDRLTLLALLDRTEDVKENVLAVLLIILVSLLGFLTLNQGFCKDIWTLLFCLIMASCQYSLLKSVQPDPASPIHGHNQIITYSRPIYFCVLCGLILLLDTGAKARHPPTYIVYGLKLFSPESLQWARDLLIVFLYCFPAISLLGLFPQINTFCIYLLEQIDMLFFGGSAVSGLPSAVYSVARSASAAALLHVFCFSAVKEPWSTQHIPALFSAFCGLLVALSYHLSRQSSDPSVLLSFIHCKLFHKFLHQNLEELASDPLPMKMKDSVKDILKSDLIICSVAAVLSFAVSASTVFLSLRPFLSIVLFALAGAVGFVTHYLLPQLRKHHPWMWISHPILKNREYQQREVRDVAHLMWFERLYVWLQCFEKYILYPAIILNALTTDAFSISNYRRLGTHWDIFLMVIAGMKLLRTSFCNPVHQFTHLGFTVIFFHFDYKDISESFLLDFFMVSILFSKLGDLLHKLQFVLTYVAPWQMAWGSSFHVFAQLFAIPHSAMLFFQTFATSIVSTPLSPFLGSVIFITSYVRPVKFWEKNYNTRRVDNSNTRLVVQIEKDSGSDGNNLNSIFYEHLTRALQESLCGDLILGRWGNYSSGDCFILASDYLNAFVHLIEIGNGLVTFQLRGLEFRGTYCQQREVEAIMEGDEDDRGCCCCKPGHLPHLLSCNAAFNLRWLTWEITRTQYILEGYSIMDNNAATMLQVFDLRRILIRYYIKSIIYYMVTSPKLFSWIKNESLLKTLQPFAKWHYIERDLAMFNMNIDDDYVPCLQGITRASYCNVYLEWIQYCAQKRQEPSKPLESDEDSPLVTLSFALCILGRRALGTAAHNMALSLDSFLYGLHALFKGDFRITARDEWVFADIDLLHKVVVPALRMSLKLHQDQFTCPDEYEDPAVLYEAIQSFEKKVVICHEGDPAWRGAVLANKEELLTLRHVVDEGTDEYKVLMLHRSFLSFKVIKVNRECVRGLWAGQQQELIFLRNRNPERGSIQNNKQVLRNLINSSCDQPLGYPMYVSPLTTSYLGTHRQLKNIWSGPVTLDSIRAWLRTKWLRVRKDCDAAGQPGAGNTEDMDAGGAPPAGGNSAPSGESRESSAEQPRKDGSRHWSPREGTRRPGRRKGRSQSVQAHRALSQTPPVLRASGPVAGSRPTFLQTSTSVHELAPRRSGSRLSLCPSAASLHSQPPAAPPAGPLSVRERAE…
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
location: complement(join(5890014..5890175,5891672..5892120,5907995..5908182,5909443..5909717,5910739..5910969,5911694..5911838,5931464..5931576,5933516..5933749,5943106..5943359,5958909..5959124,5963826..5963884,5990934..5991063,5996963..5997071,6055950..6056127,6060354..6060495,6082855..6083005,6083786..6083878,6097568..6097664,6099123..6099232,6128238..6128329,6129951..6130061,6140030..6140201,6152647..6152679,6152766..6152919,6163022..6163167,6168213..6168348,6186550..6186643,6189995..6190140,6190266..6190413,6200397..6201674,6203259..6203295,6203974..6204091,6205655..6205860,6227315..6227467))
location: region:5890014-6227467:-1
so has part: feature:6227315-6227467:-1:exon
so has part: feature:6205655-6205860:-1:exon
so has part: feature:6203974-6204091:-1:exon
so has part: feature:6203259-6203295:-1:exon
so has part: feature:6200397-6201674:-1:exon
so has part: feature:6190266-6190413:-1:exon
so has part: feature:6189995-6190140:-1:exon
so has part: feature:6186550-6186643:-1:exon
so has part: feature:6168213-6168348:-1:exon
so has part: feature:6163022-6163167:-1:exon
so has part: feature:6152766-6152919:-1:exon
so has part: feature:6152647-6152679:-1:exon
so has part: feature:6140030-6140201:-1:exon
so has part: feature:6129951-6130061:-1:exon
so has part: feature:6128238-6128329:-1:exon
so has part: feature:6099123-6099232:-1:exon
so has part: feature:6097568-6097664:-1:exon
so has part: feature:6083786-6083878:-1:exon
so has part: feature:6082855-6083005:-1:exon
so has part: feature:6060354-6060495:-1:exon
so has part: feature:6055950-6056127:-1:exon
so has part: feature:5996963-5997071:-1:exon
so has part: feature:5990934-5991063:-1:exon
so has part: feature:5963826-5963884:-1:exon
so has part: feature:5958909-5959124:-1:exon
so has part: feature:5943106-5943359:-1:exon
so has part: feature:5933516-5933749:-1:exon
so has part: feature:5931464-5931576:-1:exon
so has part: feature:5911694-5911838:-1:exon
so has part: feature:5910739-5910969:-1:exon
so has part: feature:5909443-5909717:-1:exon
so has part: feature:5907995-5908182:-1:exon
so has part: feature:5891672-5892120:-1:exon
so has part: feature:5890014-5890175:-1:exon

XP_027386390.1
type: Protein
SIO_000068: ncbiprotein

position:5890014:-1
position: 5890014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6227467:-1
position: 6227467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6227315-6227467:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6205655-6205860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6203974-6204091:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6203259-6203295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6200397-6201674:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6190266-6190413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6189995-6190140:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6186550-6186643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6168213-6168348:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6163022-6163167:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6152766-6152919:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6152647-6152679:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6140030-6140201:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6129951-6130061:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6128238-6128329:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6099123-6099232:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6097568-6097664:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6083786-6083878:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6082855-6083005:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6060354-6060495:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6055950-6056127:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5996963-5997071:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5990934-5991063:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5963826-5963884:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5958909-5959124:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5943106-5943359:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5933516-5933749:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5931464-5931576:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5911694-5911838:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5910739-5910969:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5909443-5909717:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5907995-5908182:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5891672-5892120:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5890014-5890175:-1:exon

PCNX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: PCNX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pecanex-like protein 2 isoform X1
translation: MGSQVLQLLRQGVWAALTGGWYHDPDQSKFTNSCHLYLWLFLFLLPLALHLAFPPDAITVFLYCSSVTIFFTVIKLVSYRLHLMFDKGEVIQQRPSGKKEKPRKDKEANGDHITNHRNPSNNGQINSGKKEADRSLSTPPLHGSSGGQSINSHHSSGLLDLPAQETVEDLKGVVLSDDQPMAPVSSTSPAIKAESLPASKAPVLGAVTTSAIPLKPVVAETCISDQGKERGGRGQPPFHHRSEGGLVDKETVKKLPYLSLSQYDLLETDVSVQPWGSENSVLIPEPGHYASIRDKLQNKSPQDSLSSSCPQCNTVIARPVQGQVSQQVDSTLNQDVGDSDSEVAVTLIDTSQPGDPLSLHEPIRIVITMSSTPNSMTDLESSLHLKAVGTQPSGFQADAEPAPPGAASPLNVEQMRIPVITFQLSEDAGGMVCPESSGSGRTPERLTVEASSNPCSGYESGEGGSATQDHSPSPGDHCATPPTPNMVSESEVGMEAQANLDPSSCRTSQEKRHARVLSVDSGTDVFLSKSSAEIINDKEQTMPTSKSDLEAKEGQVPNESNFLEFVSLLESINTSKVVVSNQRNEPTEQNKDSRLPADNCSQEKKEEILESEKPSGPIAKQGKPDVQSQDHTSTSPGLTEPAKIPTLFQGNRQRQIIYRVTSQQDSSVLQVISGPETSVQDEMSVDAMHVFIDEHGEIKSCYLKSGNQKEGPFQHQPSNYEGFSHAGDLQISSSSTTTSESQDPSSGDPAVSALQQQLLLMVARRTQSETPRRISPTKRNTHLSQDLEDSSCSSTQGKFNREQFYKFIIFPGKWIKVWYDRLTLLALLDRTEDVKENVLAVLLIILVSLLGFLTLNQGFCKDIWTLLFCLIMASCQYSLLKSVQPDPASPIHGHNQIITYSRPIYFCVLCGLILLLDTGAKARHPPTYIVYGLKLFSPESLQWARDLLIVFLYCFPAISLLGLFPQINTFCIYLLEQIDMLFFGGSAVSGLPSAVYSVARSASAAALLHVFCFSAVKEPWSTQHIPALFSAFCGLLVALSYHLSRQSSDPSVLLSFIHCKLFHKFLHQNLEELASDPLPMKMKDSVKDILKSDLIICSVAAVLSFAVSASTVFLSLRPFLSIVLFALAGAVGFVTHYLLPQLRKHHPWMWISHPILKNREYQQREVRDVAHLMWFERLYVWLQCFEKYILYPAIILNALTTDAFSISNYRRLGTHWDIFLMVIAGMKLLRTSFCNPVHQFTHLGFTVIFFHFDYKDISESFLLDFFMVSILFSKLGDLLHKLQFVLTYVAPWQMAWGSSFHVFAQLFAIPHSAMLFFQTFATSIVSTPLSPFLGSVIFITSYVRPVKFWEKNYNTRRVDNSNTRLVVQIEKDSGSDGNNLNSIFYEHLTRALQESLCGDLILGRWGNYSSGDCFILASDYLNAFVHLIEIGNGLVTFQLRGLEFRGTYCQQREVEAIMEGDEDDRGCCCCKPGHLPHLLSCNAAFNLRWLTWEITRTQYILEGYSIMDNNAATMLQVFDLRRILIRYYIKSIIYYMVTSPKLFSWIKNESLLKTLQPFAKWHYIERDLAMFNMNIDDDYVPCLQGITRASYCNVYLEWIQYCAQKRQEPSKPLESDEDSPLVTLSFALCILGRRALGTAAHNMALSLDSFLYGLHALFKGDFRITARDEWVFADIDLLHKVVVPALRMSLKLHQDQFTCPDEYEDPAVLYEAIQSFEKKVVICHEGDPAWRGAVLANKEELLTLRHVVDEGTDEYKVLMLHRSFLSFKVIKVNRECVRGLWAGQQQELIFLRNRNPERGSIQNNKQVLRNLINSSCDQPLGYPMYVSPLTTSYLGTHRQLKNIWSGPVTLDSIRAWLRTKWLRVRKDCDAAGQPGAGNTEDMDAGGAPPAGGNSAPSGESRESSAEQPRKDGSRHWSPREGTRRPGRRKGRSQSVQAHRALSQTPPVLRASGPVAGSRPTFLQTSTSVHELAPRRSGSRLSLCPSAASLHSQPPAAPPAG…
SIO_010081: PCNX2
subclass of: SO_0000673
so part of: PCNX2
location: complement(join(5890014..5890175,5891672..5892120,5907995..5908182,5909443..5909717,5910739..5910969,5911694..5911838,5931464..5931576,5933516..5933749,5943106..5943359,5958909..5959124,5963826..5963884,5990934..5991063,5996963..5997071,6055950..6056127,6060354..6060495,6082855..6083005,6083786..6083878,6097568..6097664,6099123..6099232,6128238..6128329,6129951..6130061,6140030..6140201,6152647..6152679,6152766..6152919,6163022..6163167,6167353..6167379,6168213..6168348,6186550..6186643,6189995..6190140,6190266..6190413,6200397..6201674,6203259..6203295,6203974..6204091,6205655..6205860,6227315..6227467))
location: region:5890014-6227467:-1
so has part: feature:6227315-6227467:-1:exon
so has part: feature:6205655-6205860:-1:exon
so has part: feature:6203974-6204091:-1:exon
so has part: feature:6203259-6203295:-1:exon
so has part: feature:6200397-6201674:-1:exon
so has part: feature:6190266-6190413:-1:exon
so has part: feature:6189995-6190140:-1:exon
so has part: feature:6186550-6186643:-1:exon
so has part: feature:6168213-6168348:-1:exon
so has part: feature:6167353-6167379:-1:exon
so has part: feature:6163022-6163167:-1:exon
so has part: feature:6152766-6152919:-1:exon
so has part: feature:6152647-6152679:-1:exon
so has part: feature:6140030-6140201:-1:exon
so has part: feature:6129951-6130061:-1:exon
so has part: feature:6128238-6128329:-1:exon
so has part: feature:6099123-6099232:-1:exon
so has part: feature:6097568-6097664:-1:exon
so has part: feature:6083786-6083878:-1:exon
so has part: feature:6082855-6083005:-1:exon
so has part: feature:6060354-6060495:-1:exon
so has part: feature:6055950-6056127:-1:exon
so has part: feature:5996963-5997071:-1:exon
so has part: feature:5990934-5991063:-1:exon
so has part: feature:5963826-5963884:-1:exon
so has part: feature:5958909-5959124:-1:exon
so has part: feature:5943106-5943359:-1:exon
so has part: feature:5933516-5933749:-1:exon
so has part: feature:5931464-5931576:-1:exon
so has part: feature:5911694-5911838:-1:exon
so has part: feature:5910739-5910969:-1:exon
so has part: feature:5909443-5909717:-1:exon
so has part: feature:5907995-5908182:-1:exon
so has part: feature:5891672-5892120:-1:exon
so has part: feature:5890014-5890175:-1:exon

XP_027386389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6227315-6227467:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6205655-6205860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6203974-6204091:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6203259-6203295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6200397-6201674:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6190266-6190413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6189995-6190140:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6186550-6186643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6168213-6168348:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6167353-6167379:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6163022-6163167:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6152766-6152919:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6152647-6152679:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6140030-6140201:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6129951-6130061:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6128238-6128329:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6099123-6099232:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6097568-6097664:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6083786-6083878:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6082855-6083005:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6060354-6060495:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6055950-6056127:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5996963-5997071:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5990934-5991063:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5963826-5963884:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5958909-5959124:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5943106-5943359:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5933516-5933749:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5931464-5931576:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5911694-5911838:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5910739-5910969:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5909443-5909717:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5907995-5908182:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5891672-5892120:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5890014-5890175:-1:exon

MAP3K21
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: MAP3K21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6242701..6301504
location: region:6242701-6301504:1
so has part: feature:6242701-6301504:1:exon
subclass of: SO_0000010

113885304
type: Gene
SIO_000068: ncbigene

position:6242701:1
position: 6242701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6301504:1
position: 6301504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6242701-6301504:1:exon

MAP3K21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: MAP3K21
product: mitogen-activated protein kinase kinase kinase 21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_027530527.1
SIO_010081: MAP3K21
subclass of: SO_0000673
so part of: MAP3K21
location: join(6242701..6243779,6260243..6260423,6268863..6269011,6270030..6270205,6281958..6282198,6291489..6291611,6293493..6293643,6294055..6294152,6296191..6296976,6298511..6301504)
location: region:6242701-6301504:1
so has part: feature:6242701-6243779:1:exon
so has part: feature:6260243-6260423:1:exon
so has part: feature:6268863-6269011:1:exon
so has part: feature:6270030-6270205:1:exon
so has part: feature:6281958-6282198:1:exon
so has part: feature:6291489-6291611:1:exon
so has part: feature:6293493-6293643:1:exon
so has part: feature:6294055-6294152:1:exon
so has part: feature:6296191-6296976:1:exon
so has part: feature:6298511-6301504:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6242701-6243779:1:exon

position:6243779:1
position: 6243779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6260243-6260423:1:exon

position:6260243:1
position: 6260243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6260423:1
position: 6260423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6268863-6269011:1:exon

position:6268863:1
position: 6268863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6269011:1
position: 6269011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6270030-6270205:1:exon

position:6270030:1
position: 6270030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6270205:1
position: 6270205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6281958-6282198:1:exon

position:6281958:1
position: 6281958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6282198:1
position: 6282198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6291489-6291611:1:exon

position:6291489:1
position: 6291489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6291611:1
position: 6291611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6293493-6293643:1:exon

position:6293493:1
position: 6293493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6293643:1
position: 6293643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6294055-6294152:1:exon

position:6294055:1
position: 6294055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6294152:1
position: 6294152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6296191-6296976:1:exon

position:6296191:1
position: 6296191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6296976:1
position: 6296976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6298511-6301504:1:exon

position:6298511:1
position: 6298511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAP3K21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: MAP3K21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 21
translation: MALPGAESAPDRPGSPARGAPTGSASSSSASSGGSASAGAGLWAALYDYEARGEDELSLRRGQLVEVLSQDAAVSGDEGWWAGQVQRRLGIFPANYVAPCRPAAHRAPQPARQPPPRPGSPVHVDFERLELKELIGAGGFGQVYRATWQGQEVAVKAARCDPEQDAAAAAESVRREARLFSMLRHPNIIELRGVCLRQPHLCLVLEFARGGALNRALAAANATPDPRAPSPRRARRIPPHVLVNWAVQIARGMLYLHEEAVVPILHRDLKSSNILLLEKIEHDDICNKTLKITDFGLAREWHRTTRMSAAGTYAWMAPEVIKSSLFSKGSDIWSYGVVLWELLTGEVPYRGIDGLAVAYGVAVNKLTLPIPSTCPEPFAKLMKECWQQDPHIRPSFASILEQLTEIEKAVMTEMPQESFHSMQDDWKLEIQQMFDELRTKEKELRSREEELTRAALQQKSQEELLRRREQQLAAREIDVLERELNILIFQLNQEKPNVKKRKGKFKRSRLKLRDGHRISLPSDFQHKITVQASPNLDKRRSLNSSSSSPPSSPTVIPRLRAIQLTSDESNKTWGRNTVCRQEEFEDIKRNFKKKGCTWGPNSIQMKERTDGRERIRPLSDGNSPWSTIVIKNQKTTPLASLFVDQPGACEEPKLAPDGLEHRKPKQIKSPTQAYIDLPLWKDGQRENPVEPESREEGTPVSPAADTPQGTPPNSLSRSPQRKKTESALYGCTMLLASVALGLDIRELTKAQAPEDPLPKEDRKKREGIFQRAPKSRRSASPAARLLAVGEGASSTPSPPPSTIANLLSVPSLSTKCLLQTDGEDSFESSTHISCAPRVPTPDPCPAFGGRGQKSTPMPGLETSRDGWRNPPPSFMELTRGGVSYAAASKERAASHRRTMSDGSAPQPPALISAPGASELPPEWVWGMPPSLSGPHSDLPSEVPPEKQRAVHMVPLPRPPPLRSRGGALQAFPPRAESQPSQAGPAVGGPGPAHSCPLGPKKRTQPHMPSLLDSDVEGQSRDRTVPLCRMRSRASRPSLYELEKEFLS
SIO_010081: MAP3K21
subclass of: SO_0000673
so part of: MAP3K21
location: join(6242960..6243779,6260243..6260423,6268863..6269011,6270030..6270205,6281958..6282198,6291489..6291611,6293493..6293643,6294055..6294152,6296191..6296976,6298511..6298929)
location: region:6242960-6298929:1
so has part: feature:6242960-6243779:1:exon
so has part: feature:6260243-6260423:1:exon
so has part: feature:6268863-6269011:1:exon
so has part: feature:6270030-6270205:1:exon
so has part: feature:6281958-6282198:1:exon
so has part: feature:6291489-6291611:1:exon
so has part: feature:6293493-6293643:1:exon
so has part: feature:6294055-6294152:1:exon
so has part: feature:6296191-6296976:1:exon
so has part: feature:6298511-6298929:1:exon

XP_027386328.1
type: Protein
SIO_000068: ncbiprotein

position:6242960:1
position: 6242960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6298929:1
position: 6298929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6242960-6243779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6260243-6260423:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6268863-6269011:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6270030-6270205:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6281958-6282198:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6291489-6291611:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6293493-6293643:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6294055-6294152:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6296191-6296976:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6298511-6298929:1:exon

KCNK1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: KCNK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6492257..6560088
location: region:6492257-6560088:1
so has part: feature:6492257-6560088:1:exon
subclass of: SO_0000010

113885372
type: Gene
SIO_000068: ncbigene

position:6492257:1
position: 6492257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6560088:1
position: 6560088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6492257-6560088:1:exon

KCNK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: KCNK1
product: potassium two pore domain channel subfamily K member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 26 ESTs, 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 159 samples with support for all annotated introns
transcript id: XM_027530680.1
SIO_010081: KCNK1
subclass of: SO_0000673
so part of: KCNK1
location: join(6492257..6492922,6554801..6555196,6559196..6560088)
location: region:6492257-6560088:1
so has part: feature:6492257-6492922:1:exon
so has part: feature:6554801-6555196:1:exon
so has part: feature:6559196-6560088:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6492257-6492922:1:exon

position:6492922:1
position: 6492922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6554801-6555196:1:exon

position:6554801:1
position: 6554801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6555196:1
position: 6555196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6559196-6560088:1:exon

position:6559196:1
position: 6559196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: KCNK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium channel subfamily K member 1
translation: MLQSLAGSSCVRLVERHRSAWCFGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKLKRRFLEEHECLSEPQLEQFLGRVLEASNYGVSVLSNASGNWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRVTIHVTRRPVLYFHVRWGFSKQAVAIVHAVLLGVVTVSCFFFIPAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPGEGYNQKFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKDKEEDQMHIIEHDQLSFSSITDQAAGVKEDQKQNEPFVSPQPPALADGASDH
SIO_010081: KCNK1
subclass of: SO_0000673
so part of: KCNK1
location: join(6492568..6492922,6554801..6555196,6559196..6559455)
location: region:6492568-6559455:1
so has part: feature:6492568-6492922:1:exon
so has part: feature:6554801-6555196:1:exon
so has part: feature:6559196-6559455:1:exon

XP_027386481.1
type: Protein
SIO_000068: ncbiprotein

position:6492568:1
position: 6492568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6559455:1
position: 6559455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6492568-6492922:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6554801-6555196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6559196-6559455:1:exon

TRNAC-ACA
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TRNAC-ACA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 6648953..6649024
location: region:6648953-6649024:1
so has part: feature:6648953-6649024:1:exon
subclass of: SO_0000663

113885680
type: Gene
SIO_000068: ncbigene

position:6648953:1
position: 6648953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6649024:1
position: 6649024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6648953-6649024:1:exon

TRNAC-ACA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30522
gene: TRNAC-ACA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon ACA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:6648986..6648988,aa:Cys,seq:aca)
SIO_010081: TRNAC-ACA
subclass of: SO_0000673
so part of: TRNAC-ACA
location: 6648953..6649024
location: region:6648953-6649024:1
so has part: feature:6648953-6649024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6648953-6649024:1:exon

SLC35F3
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: SLC35F3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6759335..7185801
location: region:6759335-7185801:1
so has part: feature:6759335-7185801:1:exon
subclass of: SO_0000010

113885430
type: Gene
SIO_000068: ncbigene

position:6759335:1
position: 6759335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7185801:1
position: 7185801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6759335-7185801:1:exon

SLC35F3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SLC35F3
product: solute carrier family 35 member F3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_027530750.1
SIO_010081: SLC35F3
subclass of: SO_0000673
so part of: SLC35F3
location: join(6759335..6759488,6759853..6760082,7059986..7060310,7167272..7167491,7174713..7174838,7177431..7177623,7179156..7179245,7184307..7185801)
location: region:6759335-7185801:1
so has part: feature:6759335-6759488:1:exon
so has part: feature:6759853-6760082:1:exon
so has part: feature:7059986-7060310:1:exon
so has part: feature:7167272-7167491:1:exon
so has part: feature:7174713-7174838:1:exon
so has part: feature:7177431-7177623:1:exon
so has part: feature:7179156-7179245:1:exon
so has part: feature:7184307-7185801:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6759335-6759488:1:exon

position:6759488:1
position: 6759488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6759853-6760082:1:exon

position:6759853:1
position: 6759853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6760082:1
position: 6760082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7059986-7060310:1:exon

position:7059986:1
position: 7059986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7060310:1
position: 7060310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7167272-7167491:1:exon

position:7167272:1
position: 7167272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7167491:1
position: 7167491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7174713-7174838:1:exon

position:7174713:1
position: 7174713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7174838:1
position: 7174838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7177431-7177623:1:exon

position:7177431:1
position: 7177431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7177623:1
position: 7177623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7179156-7179245:1:exon

position:7179156:1
position: 7179156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7179245:1
position: 7179245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7184307-7185801:1:exon

position:7184307:1
position: 7184307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC35F3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SLC35F3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative thiamine transporter SLC35F3 isoform X1
translation: MGIREFPGSAPRGKGIAIGMRRSPDVSPRRLSDISPQLRQLKYLVVDEAIKEDLKWSRSVEDLTSGPVGLTSIEERILRITGYYGYQPWATSYKREERPRDSPGPAEAQAPAGTEAGGRPSRHCWRCSRAQLKKIFWGVAVVLCVCASWAGATQLAKLTFRKFDAPFTLTWFATNWNFLFFPLYYAGHICKSAEKQSVKQRYRECCRFFGDNGLTLKVFFTKAAPFGVLWTLTNYLYLHAIKKINTTDVSVLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYADGFHSHSVIGIALVVGSASMSALYKVLFKLLLGSAKFGEAALFLSILGVFNILFITCIPVILYFTKVEYWSSFDDIPWGNLCGFSVLLLTFNIVLNFGIAVTYPTLMSLGIVLSVPVNAVVDHYTSKIVFNGVRVIAIIIIGLGFLLLLLPEEWDVWLIKLLTRLKVRKKEEAAEGGADLGLGLQSKSRRARPSFAR
SIO_010081: SLC35F3
subclass of: SO_0000673
so part of: SLC35F3
location: join(6759436..6759488,6759853..6760082,7059986..7060310,7167272..7167491,7174713..7174838,7177431..7177623,7179156..7179245,7184307..7184542)
location: region:6759436-7184542:1
so has part: feature:6759436-6759488:1:exon
so has part: feature:6759853-6760082:1:exon
so has part: feature:7059986-7060310:1:exon
so has part: feature:7167272-7167491:1:exon
so has part: feature:7174713-7174838:1:exon
so has part: feature:7177431-7177623:1:exon
so has part: feature:7179156-7179245:1:exon
so has part: feature:7184307-7184542:1:exon

XP_027386551.1
type: Protein
SIO_000068: ncbiprotein

position:6759436:1
position: 6759436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7184542:1
position: 7184542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6759436-6759488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6759853-6760082:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7059986-7060310:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7167272-7167491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7174713-7174838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7177431-7177623:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7179156-7179245:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7184307-7184542:1:exon

SLC35F3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SLC35F3
product: solute carrier family 35 member F3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_027530751.1
SIO_010081: SLC35F3
subclass of: SO_0000673
so part of: SLC35F3
location: join(7038552..7038863,7059986..7060310,7167272..7167491,7174713..7174838,7177431..7177623,7179156..7179245,7184307..7185801)
location: region:7038552-7185801:1
so has part: feature:7038552-7038863:1:exon
so has part: feature:7059986-7060310:1:exon
so has part: feature:7167272-7167491:1:exon
so has part: feature:7174713-7174838:1:exon
so has part: feature:7177431-7177623:1:exon
so has part: feature:7179156-7179245:1:exon
so has part: feature:7184307-7185801:1:exon

position:7038552:1
position: 7038552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7038552-7038863:1:exon

position:7038863:1
position: 7038863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7059986-7060310:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7167272-7167491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7174713-7174838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7177431-7177623:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7179156-7179245:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7184307-7185801:1:exon

SLC35F3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SLC35F3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative thiamine transporter SLC35F3 isoform X2
translation: MKKHSARVAPLSACNSPVLTLTKVEGEERPRDSPGPAEAQAPAGTEAGGRPSRHCWRCSRAQLKKIFWGVAVVLCVCASWAGATQLAKLTFRKFDAPFTLTWFATNWNFLFFPLYYAGHICKSAEKQSVKQRYRECCRFFGDNGLTLKVFFTKAAPFGVLWTLTNYLYLHAIKKINTTDVSVLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYADGFHSHSVIGIALVVGSASMSALYKVLFKLLLGSAKFGEAALFLSILGVFNILFITCIPVILYFTKVEYWSSFDDIPWGNLCGFSVLLLTFNIVLNFGIAVTYPTLMSLGIVLSVPVNAVVDHYTSKIVFNGVRVIAIIIIGLGFLLLLLPEEWDVWLIKLLTRLKVRKKEEAAEGGADLGLGLQSKSRRARPSFAR
SIO_010081: SLC35F3
subclass of: SO_0000673
so part of: SLC35F3
location: join(7038788..7038863,7059986..7060310,7167272..7167491,7174713..7174838,7177431..7177623,7179156..7179245,7184307..7184542)
location: region:7038788-7184542:1
so has part: feature:7038788-7038863:1:exon
so has part: feature:7059986-7060310:1:exon
so has part: feature:7167272-7167491:1:exon
so has part: feature:7174713-7174838:1:exon
so has part: feature:7177431-7177623:1:exon
so has part: feature:7179156-7179245:1:exon
so has part: feature:7184307-7184542:1:exon

XP_027386552.1
type: Protein
SIO_000068: ncbiprotein

position:7038788:1
position: 7038788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7038788-7038863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7059986-7060310:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7167272-7167491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7174713-7174838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7177431-7177623:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7179156-7179245:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7184307-7184542:1:exon

LOC113885513
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7100488..7116499)
location: region:7100488-7116499:-1
so has part: feature:7100488-7116499:-1:exon

113885513
type: Gene
SIO_000068: ncbigene

position:7100488:-1
position: 7100488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7116499:-1
position: 7116499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7100488-7116499:-1:exon

LOC113885513
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885513
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113885513
subclass of: SO_0000673
so part of: LOC113885513
location: complement(7100488..7101385)
location: region:7100488-7101385:-1
so has part: feature:7100488-7101385:-1:exon

position:7101385:-1
position: 7101385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7100488-7101385:-1:exon

LOC113885513
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885513
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113885513
subclass of: SO_0000673
so part of: LOC113885513
location: complement(7116359..7116499)
location: region:7116359-7116499:-1
so has part: feature:7116359-7116499:-1:exon

position:7116359:-1
position: 7116359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7116359-7116499:-1:exon

LOC113885174
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7149675..7162662)
location: region:7149675-7162662:-1
so has part: feature:7149675-7162662:-1:exon

113885174
type: Gene
SIO_000068: ncbigene

position:7149675:-1
position: 7149675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7162662:-1
position: 7162662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7149675-7162662:-1:exon

LOC113885174
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885174
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC113885174
subclass of: SO_0000673
so part of: LOC113885174
location: complement(7149675..7150189)
location: region:7149675-7150189:-1
so has part: feature:7149675-7150189:-1:exon

position:7150189:-1
position: 7150189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7149675-7150189:-1:exon

LOC113885174
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885174
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC113885174
subclass of: SO_0000673
so part of: LOC113885174
location: complement(7162606..7162662)
location: region:7162606-7162662:-1
so has part: feature:7162606-7162662:-1:exon

position:7162606:-1
position: 7162606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7162606-7162662:-1:exon

TRNAS-GGA
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TRNAS-GGA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(7214908..7214979)
location: region:7214908-7214979:-1
so has part: feature:7214908-7214979:-1:exon
subclass of: SO_0000663

113885672
type: Gene
SIO_000068: ncbigene

position:7214908:-1
position: 7214908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7214979:-1
position: 7214979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7214908-7214979:-1:exon

TRNAS-GGA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30522
gene: TRNAS-GGA
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon GGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(7214944..7214946),aa:Ser, seq:gga)
SIO_010081: TRNAS-GGA
subclass of: SO_0000673
so part of: TRNAS-GGA
location: complement(7214908..7214979)
location: region:7214908-7214979:-1
so has part: feature:7214908-7214979:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7214908-7214979:-1:exon

LOC113885455
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7218955..7227540
location: region:7218955-7227540:1
so has part: feature:7218955-7227540:1:exon
subclass of: SO_0000010

113885455
type: Gene
SIO_000068: ncbigene

position:7218955:1
position: 7218955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7227540:1
position: 7227540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7218955-7227540:1:exon

LOC113885455
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885455
product: cytochrome c oxidase assembly factor 6 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 194 samples with support for all annotated introns
transcript id: XM_027530784.1
SIO_010081: LOC113885455
subclass of: SO_0000673
so part of: LOC113885455
location: join(7218955..7219060,7219791..7219950,7227190..7227540)
location: region:7218955-7227540:1
so has part: feature:7218955-7219060:1:exon
so has part: feature:7219791-7219950:1:exon
so has part: feature:7227190-7227540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7218955-7219060:1:exon

position:7219060:1
position: 7219060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7219791-7219950:1:exon

position:7219791:1
position: 7219791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7219950:1
position: 7219950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7227190-7227540:1:exon

position:7227190:1
position: 7227190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885455
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885455
product: cytochrome c oxidase assembly factor 6 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_027530785.1
SIO_010081: LOC113885455
subclass of: SO_0000673
so part of: LOC113885455
location: join(7218961..7219053,7219791..7219950,7227190..7227540)
location: region:7218961-7227540:1
so has part: feature:7218961-7219053:1:exon
so has part: feature:7219791-7219950:1:exon
so has part: feature:7227190-7227540:1:exon

position:7218961:1
position: 7218961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7218961-7219053:1:exon

position:7219053:1
position: 7219053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7219791-7219950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7227190-7227540:1:exon

LOC113885455
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885455
product: cytochrome c oxidase assembly factor 6 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 171 samples with support for all annotated introns
transcript id: XM_027530782.1
SIO_010081: LOC113885455
subclass of: SO_0000673
so part of: LOC113885455
location: join(7219036..7219594,7219791..7219950,7227190..7227540)
location: region:7219036-7227540:1
so has part: feature:7219036-7219594:1:exon
so has part: feature:7219791-7219950:1:exon
so has part: feature:7227190-7227540:1:exon

position:7219036:1
position: 7219036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7219036-7219594:1:exon

position:7219594:1
position: 7219594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7219791-7219950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7227190-7227540:1:exon

LOC113885455
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885455
product: cytochrome c oxidase assembly factor 6 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 210 samples with support for all annotated introns
transcript id: XM_027530783.1
SIO_010081: LOC113885455
subclass of: SO_0000673
so part of: LOC113885455
location: join(7219043..7219260,7219791..7219950,7227190..7227540)
location: region:7219043-7227540:1
so has part: feature:7219043-7219260:1:exon
so has part: feature:7219791-7219950:1:exon
so has part: feature:7227190-7227540:1:exon

position:7219043:1
position: 7219043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7219043-7219260:1:exon

position:7219260:1
position: 7219260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7219791-7219950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7227190-7227540:1:exon

LOC113885455
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885455
product: cytochrome c oxidase assembly factor 6 homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_027530786.1
SIO_010081: LOC113885455
subclass of: SO_0000673
so part of: LOC113885455
location: join(7219300..7219384,7219791..7219950,7227190..7227540)
location: region:7219300-7227540:1
so has part: feature:7219300-7219384:1:exon
so has part: feature:7219791-7219950:1:exon
so has part: feature:7227190-7227540:1:exon

position:7219300:1
position: 7219300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7219300-7219384:1:exon

position:7219384:1
position: 7219384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7219791-7219950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7227190-7227540:1:exon

LOC113885455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly factor 6 homolog isoform X1
translation: MDLSPLGMAAPTMKERQACWGARDEYWKCLDENTEDASKCKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGDFQPSKMTAKS
SIO_010081: LOC113885455
subclass of: SO_0000673
so part of: LOC113885455
location: join(7219590..7219594,7219791..7219950,7227190..7227285)
location: region:7219590-7227285:1
so has part: feature:7219590-7219594:1:exon
so has part: feature:7219791-7219950:1:exon
so has part: feature:7227190-7227285:1:exon

XP_027386583.1
type: Protein
SIO_000068: ncbiprotein

position:7219590:1
position: 7219590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7227285:1
position: 7227285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7219590-7219594:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7219791-7219950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7227190-7227285:1:exon

LOC113885455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly factor 6 homolog isoform X2
translation: MAAPTMKERQACWGARDEYWKCLDENTEDASKCKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGDFQPSKMTAKS
SIO_010081: LOC113885455
subclass of: SO_0000673
so part of: LOC113885455
location: join(7219807..7219950,7227190..7227285)
location: region:7219807-7227285:1
so has part: feature:7219807-7219950:1:exon
so has part: feature:7227190-7227285:1:exon

XP_027386584.1
type: Protein
SIO_000068: ncbiprotein

position:7219807:1
position: 7219807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7219807-7219950:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7227190-7227285:1:exon

LOC113885455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly factor 6 homolog isoform X2
translation: MAAPTMKERQACWGARDEYWKCLDENTEDASKCKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGDFQPSKMTAKS
SIO_010081: LOC113885455
subclass of: SO_0000673
so part of: LOC113885455
location: join(7219807..7219950,7227190..7227285)
location: region:7219807-7227285:1
so has part: feature:7219807-7219950:1:exon
so has part: feature:7227190-7227285:1:exon

XP_027386585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7219807-7219950:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7227190-7227285:1:exon

LOC113885455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly factor 6 homolog isoform X2
translation: MAAPTMKERQACWGARDEYWKCLDENTEDASKCKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGDFQPSKMTAKS
SIO_010081: LOC113885455
subclass of: SO_0000673
so part of: LOC113885455
location: join(7219807..7219950,7227190..7227285)
location: region:7219807-7227285:1
so has part: feature:7219807-7219950:1:exon
so has part: feature:7227190-7227285:1:exon

XP_027386586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7219807-7219950:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7227190-7227285:1:exon

LOC113885455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly factor 6 homolog isoform X2
translation: MAAPTMKERQACWGARDEYWKCLDENTEDASKCKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGDFQPSKMTAKS
SIO_010081: LOC113885455
subclass of: SO_0000673
so part of: LOC113885455
location: join(7219807..7219950,7227190..7227285)
location: region:7219807-7227285:1
so has part: feature:7219807-7219950:1:exon
so has part: feature:7227190-7227285:1:exon

XP_027386587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7219807-7219950:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7227190-7227285:1:exon

LOC113885456
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885456
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7222302..7222603)
location: region:7222302-7222603:-1
so has part: feature:7222302-7222603:-1:exon
subclass of: SO_0000011

113885456
type: Gene
SIO_000068: ncbigene

position:7222302:-1
position: 7222302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7222603:-1
position: 7222603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7222302-7222603:-1:exon

LOC113885456
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113885456
product: uncharacterized LOC113885456
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XR_003509215.1
SIO_010081: LOC113885456
subclass of: SO_0000673
so part of: LOC113885456
location: complement(join(7222302..7222464,7222563..7222603))
location: region:7222302-7222603:-1
so has part: feature:7222563-7222603:-1:exon
so has part: feature:7222302-7222464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7222563-7222603:-1:exon

position:7222563:-1
position: 7222563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7222302-7222464:-1:exon

position:7222464:-1
position: 7222464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TARBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TARBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7231098..7296429)
location: region:7231098-7296429:-1
so has part: feature:7231098-7296429:-1:exon
subclass of: SO_0000010

113885599
type: Gene
SIO_000068: ncbigene

position:7231098:-1
position: 7231098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7296429:-1
position: 7296429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7231098-7296429:-1:exon

TARBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TARBP1
product: TAR (HIV-1) RNA binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_027531132.1
SIO_010081: TARBP1
subclass of: SO_0000673
so part of: TARBP1
location: complement(join(7231098..7231507,7231855..7231991,7232409..7232533,7232718..7232909,7237607..7237778,7239757..7239838,7241365..7241561,7244287..7244373,7246176..7246325,7247004..7247114,7247851..7247971,7249252..7249323,7249789..7249970,7251325..7251513,7251620..7251881,7252582..7252766,7256989..7257150,7260543..7260640,7270603..7270775,7271659..7271758,7277763..7277904,7279108..7279197,7281775..7281871,7282499..7282634,7285581..7285678,7287573..7287625,7288674..7288822,7290922..7290991,7293377..7293474,7295384..7296426))
location: region:7231098-7296426:-1
so has part: feature:7295384-7296426:-1:exon
so has part: feature:7293377-7293474:-1:exon
so has part: feature:7290922-7290991:-1:exon
so has part: feature:7288674-7288822:-1:exon
so has part: feature:7287573-7287625:-1:exon
so has part: feature:7285581-7285678:-1:exon
so has part: feature:7282499-7282634:-1:exon
so has part: feature:7281775-7281871:-1:exon
so has part: feature:7279108-7279197:-1:exon
so has part: feature:7277763-7277904:-1:exon
so has part: feature:7271659-7271758:-1:exon
so has part: feature:7270603-7270775:-1:exon
so has part: feature:7260543-7260640:-1:exon
so has part: feature:7256989-7257150:-1:exon
so has part: feature:7252582-7252766:-1:exon
so has part: feature:7251620-7251881:-1:exon
so has part: feature:7251325-7251513:-1:exon
so has part: feature:7249789-7249970:-1:exon
so has part: feature:7249252-7249323:-1:exon
so has part: feature:7247851-7247971:-1:exon
so has part: feature:7247004-7247114:-1:exon
so has part: feature:7246176-7246325:-1:exon
so has part: feature:7244287-7244373:-1:exon
so has part: feature:7241365-7241561:-1:exon
so has part: feature:7239757-7239838:-1:exon
so has part: feature:7237607-7237778:-1:exon
so has part: feature:7232718-7232909:-1:exon
so has part: feature:7232409-7232533:-1:exon
so has part: feature:7231855-7231991:-1:exon
so has part: feature:7231098-7231507:-1:exon

position:7296426:-1
position: 7296426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7295384-7296426:-1:exon

position:7295384:-1
position: 7295384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7293377-7293474:-1:exon

position:7293377:-1
position: 7293377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7293474:-1
position: 7293474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7290922-7290991:-1:exon

position:7290922:-1
position: 7290922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7290991:-1
position: 7290991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7288674-7288822:-1:exon

position:7288674:-1
position: 7288674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7288822:-1
position: 7288822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7287573-7287625:-1:exon

position:7287573:-1
position: 7287573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7287625:-1
position: 7287625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7285581-7285678:-1:exon

position:7285581:-1
position: 7285581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7285678:-1
position: 7285678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7282499-7282634:-1:exon

position:7282499:-1
position: 7282499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7282634:-1
position: 7282634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7281775-7281871:-1:exon

position:7281775:-1
position: 7281775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7281871:-1
position: 7281871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7279108-7279197:-1:exon

position:7279108:-1
position: 7279108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7279197:-1
position: 7279197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7277763-7277904:-1:exon

position:7277763:-1
position: 7277763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7277904:-1
position: 7277904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7271659-7271758:-1:exon

position:7271659:-1
position: 7271659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7271758:-1
position: 7271758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7270603-7270775:-1:exon

position:7270603:-1
position: 7270603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7270775:-1
position: 7270775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7260543-7260640:-1:exon

position:7260543:-1
position: 7260543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7260640:-1
position: 7260640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7256989-7257150:-1:exon

position:7256989:-1
position: 7256989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7257150:-1
position: 7257150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7252582-7252766:-1:exon

position:7252582:-1
position: 7252582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7252766:-1
position: 7252766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7251620-7251881:-1:exon

position:7251620:-1
position: 7251620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7251881:-1
position: 7251881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7251325-7251513:-1:exon

position:7251325:-1
position: 7251325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7251513:-1
position: 7251513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7249789-7249970:-1:exon

position:7249789:-1
position: 7249789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7249970:-1
position: 7249970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7249252-7249323:-1:exon

position:7249252:-1
position: 7249252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7249323:-1
position: 7249323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7247851-7247971:-1:exon

position:7247851:-1
position: 7247851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7247971:-1
position: 7247971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7247004-7247114:-1:exon

position:7247004:-1
position: 7247004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7247114:-1
position: 7247114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7246176-7246325:-1:exon

position:7246176:-1
position: 7246176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7246325:-1
position: 7246325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7244287-7244373:-1:exon

position:7244287:-1
position: 7244287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7244373:-1
position: 7244373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7241365-7241561:-1:exon

position:7241365:-1
position: 7241365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7241561:-1
position: 7241561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7239757-7239838:-1:exon

position:7239757:-1
position: 7239757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7239838:-1
position: 7239838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7237607-7237778:-1:exon

position:7237607:-1
position: 7237607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7237778:-1
position: 7237778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7232718-7232909:-1:exon

position:7232718:-1
position: 7232718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7232909:-1
position: 7232909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7232409-7232533:-1:exon

position:7232409:-1
position: 7232409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7232533:-1
position: 7232533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:7231855-7231991:-1:exon

position:7231855:-1
position: 7231855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7231991:-1
position: 7231991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:7231098-7231507:-1:exon

position:7231507:-1
position: 7231507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TARBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TARBP1
product: TAR (HIV-1) RNA binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 159 samples with support for all annotated introns
transcript id: XM_027531133.1
SIO_010081: TARBP1
subclass of: SO_0000673
so part of: TARBP1
location: complement(join(7231098..7231507,7231855..7231991,7232409..7232533,7232718..7232909,7237607..7237778,7239757..7239838,7241365..7241561,7244287..7244373,7246176..7246325,7247004..7247114,7247851..7247971,7249252..7249323,7249789..7249970,7251325..7251513,7251620..7251881,7252582..7252766,7256989..7257150,7260543..7260640,7270603..7270775,7271659..7271758,7277763..7277904,7279108..7279197,7281775..7281871,7282499..7282634,7285581..7285678,7287573..7287625,7288674..7288822,7290922..7290991,7293377..7293474,7295450..7296425))
location: region:7231098-7296425:-1
so has part: feature:7295450-7296425:-1:exon
so has part: feature:7293377-7293474:-1:exon
so has part: feature:7290922-7290991:-1:exon
so has part: feature:7288674-7288822:-1:exon
so has part: feature:7287573-7287625:-1:exon
so has part: feature:7285581-7285678:-1:exon
so has part: feature:7282499-7282634:-1:exon
so has part: feature:7281775-7281871:-1:exon
so has part: feature:7279108-7279197:-1:exon
so has part: feature:7277763-7277904:-1:exon
so has part: feature:7271659-7271758:-1:exon
so has part: feature:7270603-7270775:-1:exon
so has part: feature:7260543-7260640:-1:exon
so has part: feature:7256989-7257150:-1:exon
so has part: feature:7252582-7252766:-1:exon
so has part: feature:7251620-7251881:-1:exon
so has part: feature:7251325-7251513:-1:exon
so has part: feature:7249789-7249970:-1:exon
so has part: feature:7249252-7249323:-1:exon
so has part: feature:7247851-7247971:-1:exon
so has part: feature:7247004-7247114:-1:exon
so has part: feature:7246176-7246325:-1:exon
so has part: feature:7244287-7244373:-1:exon
so has part: feature:7241365-7241561:-1:exon
so has part: feature:7239757-7239838:-1:exon
so has part: feature:7237607-7237778:-1:exon
so has part: feature:7232718-7232909:-1:exon
so has part: feature:7232409-7232533:-1:exon
so has part: feature:7231855-7231991:-1:exon
so has part: feature:7231098-7231507:-1:exon

position:7296425:-1
position: 7296425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7295450-7296425:-1:exon

position:7295450:-1
position: 7295450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7293377-7293474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7290922-7290991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7288674-7288822:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7287573-7287625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7285581-7285678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7282499-7282634:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7281775-7281871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7279108-7279197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7277763-7277904:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7271659-7271758:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7270603-7270775:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7260543-7260640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7256989-7257150:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7252582-7252766:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7251620-7251881:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7251325-7251513:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7249789-7249970:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7249252-7249323:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7247851-7247971:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7247004-7247114:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7246176-7246325:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7244287-7244373:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7241365-7241561:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7239757-7239838:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7237607-7237778:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7232718-7232909:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7232409-7232533:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7231855-7231991:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7231098-7231507:-1:exon

TARBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TARBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable methyltransferase TARBP1 isoform X2
translation: MEWVLADALLSQSRDPRVLLGALCRGEASAERVETLCFLLQRLEDEEARGGGGAGALPEAAREVAAGYLVPLLRGLRGCPAGGADDPGPAARQRRRVLRAAGAALRSCARLAGGPQLAAALAEEALCDLLNAGPAPGLEGAAEAAVEVLAAVGSCLRPREDAPLLERVARAALALALGGDKAGPSPDAAALVAGRLLPALGRCGGAALRAVWGGLVAPGVSEGPGRVGSQLLILSALAEKLLPEPGADSVPASREAGLDARRCWRFWSTVQAGLAWSEDALTRKRARYLLQRAVEVSAELGTDCACAPGEGTGPSLFWWSEKKKDELLKFWENYILIMETLEGNQIHVIKPVLPKLNSLFEYAVSEENGCWLFHPSWHLCIYKRMFESENKILTKEGVTHFLELYETRILPFSPEISEFIIGPLMDALSESSLYSRSPGQLIGSVSPLGLKLQKFLVTYISFLPEEIKSSFLLKFIQKMTSRHWCAVPILFLSKALANVPRCKALGMEGLLALRDVLQCTMITHQILLRGAAQCYLLQTAMNLVDVEKVSLSDISTFLMSVRQEESLGRGTSLWMELCDWLRINESYFKQSSSCSSTGLHETSSLNAYVRNLVQEYIRSSAWEGGENSCMPDWFEAKLVALMVLLAIDVERMKSQYSEKRRTQNVLRIFLDPLLDALVKFGTNAYMPLLKTDRCLQLLLKLLHTCLLKGSGTQDDEVFTLLQNFIMSTTESISEFILRRLTMNELSTVSDLDRCHLYLMVLTELINLHLNVGWKRGNPIWKVISPLKNASIRHLQEMDRGQEPTLGRQIQRAVSMAALAMVCEVSQKPELQLDSLDVGPPETFISSLQLNQTLQKPHTEEESSFFEESSSSQGWGKIAAQYIHDQWVCLSFLLRKCHTLIPASEGEILEPTLPAVPMAVRTLQSALEALTVLPSEQVLPVFHCMKILVPKLLTTSESLCIESFDMAWKIIASLSNTQLIFWSNFKAFVQFVFDPKVLTIAAKIKGQAYFKIKEVMYRIIEMSAIKTGVFNILISYCCRSWVVSASNVSLSIAKNYSELVLEACIFGTVFRRDQRLIQDVQTFIENLGHECAANVVIENTKREDHYVRICAVKFLCLLDGSNMSHKLFMEDLAIKLLDKDELVSKSRTRYYVNSQQHRVKNRIWQILLVLFPKFDQNFLNKIIDKIFQAGFINNQASIKYFIEWIIILILHKFPQFLPKFWNCFSYGEENLKTSICTFLSVLSHLDVITETILEKKLILKQALTIVLQWCFNHNFSIRLYALVALKKIWSMCKGLHIEELAALTSVIESSLSQVENMHGAGSAKKNWQRIQEHFFFTAFHPLKDYCLETIFYTLPRLSGLTEDEWIAIGKFTRFTDIPLGAGFQWYLSTTHLCELKPGDWSQQDAGSNSGEADNQSEWTDVQKKIIPWKNHVPDFDLELVFQDRAAKLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGAAALVMGSLQCVRDKQFQHLSVSAEQWLPLVEVKPPQLIDYLQQKKAEGYTIVGVEQTAKSLDLTRYCFPEKSLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLKQGVSTA
SIO_010081: TARBP1
subclass of: SO_0000673
so part of: TARBP1
location: complement(join(7231339..7231507,7231855..7231991,7232409..7232533,7232718..7232909,7237607..7237778,7239757..7239838,7241365..7241561,7244287..7244373,7246176..7246325,7247004..7247114,7247851..7247971,7249252..7249323,7249789..7249970,7251325..7251513,7251620..7251881,7252582..7252766,7256989..7257150,7260543..7260640,7270603..7270775,7271659..7271758,7277763..7277904,7279108..7279197,7281775..7281871,7282499..7282634,7285581..7285678,7287573..7287625,7288674..7288822,7290922..7290991,7293377..7293474,7295450..7296386))
location: region:7231339-7296386:-1
so has part: feature:7295450-7296386:-1:exon
so has part: feature:7293377-7293474:-1:exon
so has part: feature:7290922-7290991:-1:exon
so has part: feature:7288674-7288822:-1:exon
so has part: feature:7287573-7287625:-1:exon
so has part: feature:7285581-7285678:-1:exon
so has part: feature:7282499-7282634:-1:exon
so has part: feature:7281775-7281871:-1:exon
so has part: feature:7279108-7279197:-1:exon
so has part: feature:7277763-7277904:-1:exon
so has part: feature:7271659-7271758:-1:exon
so has part: feature:7270603-7270775:-1:exon
so has part: feature:7260543-7260640:-1:exon
so has part: feature:7256989-7257150:-1:exon
so has part: feature:7252582-7252766:-1:exon
so has part: feature:7251620-7251881:-1:exon
so has part: feature:7251325-7251513:-1:exon
so has part: feature:7249789-7249970:-1:exon
so has part: feature:7249252-7249323:-1:exon
so has part: feature:7247851-7247971:-1:exon
so has part: feature:7247004-7247114:-1:exon
so has part: feature:7246176-7246325:-1:exon
so has part: feature:7244287-7244373:-1:exon
so has part: feature:7241365-7241561:-1:exon
so has part: feature:7239757-7239838:-1:exon
so has part: feature:7237607-7237778:-1:exon
so has part: feature:7232718-7232909:-1:exon
so has part: feature:7232409-7232533:-1:exon
so has part: feature:7231855-7231991:-1:exon
so has part: feature:7231339-7231507:-1:exon

XP_027386934.1
type: Protein
SIO_000068: ncbiprotein

position:7231339:-1
position: 7231339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7296386:-1
position: 7296386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7295450-7296386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7293377-7293474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7290922-7290991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7288674-7288822:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7287573-7287625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7285581-7285678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7282499-7282634:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7281775-7281871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7279108-7279197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7277763-7277904:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7271659-7271758:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7270603-7270775:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7260543-7260640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7256989-7257150:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7252582-7252766:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7251620-7251881:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7251325-7251513:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7249789-7249970:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7249252-7249323:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7247851-7247971:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7247004-7247114:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7246176-7246325:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7244287-7244373:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7241365-7241561:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7239757-7239838:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7237607-7237778:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7232718-7232909:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7232409-7232533:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7231855-7231991:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7231339-7231507:-1:exon

TARBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TARBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable methyltransferase TARBP1 isoform X1
translation: MEWVLADALLSQSRDPRVLLGALCRGEASAERVETLCFLLQRLEDEEARGGGGAGALPEAAREVAAGYLVPLLRGLRGCPAGGADDPGPAARQRRRVLRAAGAALRSCARLAGGPQLAAALAEEALCDLLNAGPAPGLEGAAEAAVEVLAAVGSCLRPREDAPLLERVARAALALALGGDKAGPSPDAAALVAGRLLPALGRCGGAALRAVWGGLVAPGVSEGPGRVGSQLLILSALAEKLLPEPGADSVPASREAGLDARRCWRFWSTVQAGLAWSEDALTRKRARYLLQRAVEVSAELGTDCACAPGEGTGTCLCSLAHPYLTFCEAGLSVSGPSLFWWSEKKKDELLKFWENYILIMETLEGNQIHVIKPVLPKLNSLFEYAVSEENGCWLFHPSWHLCIYKRMFESENKILTKEGVTHFLELYETRILPFSPEISEFIIGPLMDALSESSLYSRSPGQLIGSVSPLGLKLQKFLVTYISFLPEEIKSSFLLKFIQKMTSRHWCAVPILFLSKALANVPRCKALGMEGLLALRDVLQCTMITHQILLRGAAQCYLLQTAMNLVDVEKVSLSDISTFLMSVRQEESLGRGTSLWMELCDWLRINESYFKQSSSCSSTGLHETSSLNAYVRNLVQEYIRSSAWEGGENSCMPDWFEAKLVALMVLLAIDVERMKSQYSEKRRTQNVLRIFLDPLLDALVKFGTNAYMPLLKTDRCLQLLLKLLHTCLLKGSGTQDDEVFTLLQNFIMSTTESISEFILRRLTMNELSTVSDLDRCHLYLMVLTELINLHLNVGWKRGNPIWKVISPLKNASIRHLQEMDRGQEPTLGRQIQRAVSMAALAMVCEVSQKPELQLDSLDVGPPETFISSLQLNQTLQKPHTEEESSFFEESSSSQGWGKIAAQYIHDQWVCLSFLLRKCHTLIPASEGEILEPTLPAVPMAVRTLQSALEALTVLPSEQVLPVFHCMKILVPKLLTTSESLCIESFDMAWKIIASLSNTQLIFWSNFKAFVQFVFDPKVLTIAAKIKGQAYFKIKEVMYRIIEMSAIKTGVFNILISYCCRSWVVSASNVSLSIAKNYSELVLEACIFGTVFRRDQRLIQDVQTFIENLGHECAANVVIENTKREDHYVRICAVKFLCLLDGSNMSHKLFMEDLAIKLLDKDELVSKSRTRYYVNSQQHRVKNRIWQILLVLFPKFDQNFLNKIIDKIFQAGFINNQASIKYFIEWIIILILHKFPQFLPKFWNCFSYGEENLKTSICTFLSVLSHLDVITETILEKKLILKQALTIVLQWCFNHNFSIRLYALVALKKIWSMCKGLHIEELAALTSVIESSLSQVENMHGAGSAKKNWQRIQEHFFFTAFHPLKDYCLETIFYTLPRLSGLTEDEWIAIGKFTRFTDIPLGAGFQWYLSTTHLCELKPGDWSQQDAGSNSGEADNQSEWTDVQKKIIPWKNHVPDFDLELVFQDRAAKLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGAAALVMGSLQCVRDKQFQHLSVSAEQWLPLVEVKPPQLIDYLQQKKAEGYTIVGVEQTAKSLDLTRYCFPEKSLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLKQGVSTA
SIO_010081: TARBP1
subclass of: SO_0000673
so part of: TARBP1
location: complement(join(7231339..7231507,7231855..7231991,7232409..7232533,7232718..7232909,7237607..7237778,7239757..7239838,7241365..7241561,7244287..7244373,7246176..7246325,7247004..7247114,7247851..7247971,7249252..7249323,7249789..7249970,7251325..7251513,7251620..7251881,7252582..7252766,7256989..7257150,7260543..7260640,7270603..7270775,7271659..7271758,7277763..7277904,7279108..7279197,7281775..7281871,7282499..7282634,7285581..7285678,7287573..7287625,7288674..7288822,7290922..7290991,7293377..7293474,7295384..7296386))
location: region:7231339-7296386:-1
so has part: feature:7295384-7296386:-1:exon
so has part: feature:7293377-7293474:-1:exon
so has part: feature:7290922-7290991:-1:exon
so has part: feature:7288674-7288822:-1:exon
so has part: feature:7287573-7287625:-1:exon
so has part: feature:7285581-7285678:-1:exon
so has part: feature:7282499-7282634:-1:exon
so has part: feature:7281775-7281871:-1:exon
so has part: feature:7279108-7279197:-1:exon
so has part: feature:7277763-7277904:-1:exon
so has part: feature:7271659-7271758:-1:exon
so has part: feature:7270603-7270775:-1:exon
so has part: feature:7260543-7260640:-1:exon
so has part: feature:7256989-7257150:-1:exon
so has part: feature:7252582-7252766:-1:exon
so has part: feature:7251620-7251881:-1:exon
so has part: feature:7251325-7251513:-1:exon
so has part: feature:7249789-7249970:-1:exon
so has part: feature:7249252-7249323:-1:exon
so has part: feature:7247851-7247971:-1:exon
so has part: feature:7247004-7247114:-1:exon
so has part: feature:7246176-7246325:-1:exon
so has part: feature:7244287-7244373:-1:exon
so has part: feature:7241365-7241561:-1:exon
so has part: feature:7239757-7239838:-1:exon
so has part: feature:7237607-7237778:-1:exon
so has part: feature:7232718-7232909:-1:exon
so has part: feature:7232409-7232533:-1:exon
so has part: feature:7231855-7231991:-1:exon
so has part: feature:7231339-7231507:-1:exon

XP_027386933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7295384-7296386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7293377-7293474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7290922-7290991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7288674-7288822:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7287573-7287625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7285581-7285678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7282499-7282634:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7281775-7281871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7279108-7279197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7277763-7277904:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7271659-7271758:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7270603-7270775:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7260543-7260640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7256989-7257150:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7252582-7252766:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7251620-7251881:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7251325-7251513:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7249789-7249970:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7249252-7249323:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7247851-7247971:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7247004-7247114:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7246176-7246325:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7244287-7244373:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7241365-7241561:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7239757-7239838:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7237607-7237778:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7232718-7232909:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7232409-7232533:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7231855-7231991:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7231339-7231507:-1:exon

TARBP1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: TARBP1
product: TAR (HIV-1) RNA binding protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_003509256.1
SIO_010081: TARBP1
so part of: TARBP1
location: complement(join(7231959..7231991,7232409..7232533,7232718..7232909,7237607..7237778,7239449..7239546,7239757..7239838,7241365..7241561,7244287..7244373,7246176..7246325,7247004..7247114,7247851..7247971,7249252..7249323,7249789..7249970,7251325..7251513,7251620..7251881,7252582..7252766,7256989..7257150,7260543..7260640,7270603..7270775,7271659..7271758,7277763..7277904,7279108..7279197,7281775..7281871,7282499..7282634,7285581..7285678,7287573..7287625,7288674..7288822,7290922..7290991,7293377..7293474,7295384..7296429))
location: region:7231959-7296429:-1
so has part: feature:7295384-7296429:-1:exon
so has part: feature:7293377-7293474:-1:exon
so has part: feature:7290922-7290991:-1:exon
so has part: feature:7288674-7288822:-1:exon
so has part: feature:7287573-7287625:-1:exon
so has part: feature:7285581-7285678:-1:exon
so has part: feature:7282499-7282634:-1:exon
so has part: feature:7281775-7281871:-1:exon
so has part: feature:7279108-7279197:-1:exon
so has part: feature:7277763-7277904:-1:exon
so has part: feature:7271659-7271758:-1:exon
so has part: feature:7270603-7270775:-1:exon
so has part: feature:7260543-7260640:-1:exon
so has part: feature:7256989-7257150:-1:exon
so has part: feature:7252582-7252766:-1:exon
so has part: feature:7251620-7251881:-1:exon
so has part: feature:7251325-7251513:-1:exon
so has part: feature:7249789-7249970:-1:exon
so has part: feature:7249252-7249323:-1:exon
so has part: feature:7247851-7247971:-1:exon
so has part: feature:7247004-7247114:-1:exon
so has part: feature:7246176-7246325:-1:exon
so has part: feature:7244287-7244373:-1:exon
so has part: feature:7241365-7241561:-1:exon
so has part: feature:7239757-7239838:-1:exon
so has part: feature:7239449-7239546:-1:exon
so has part: feature:7237607-7237778:-1:exon
so has part: feature:7232718-7232909:-1:exon
so has part: feature:7232409-7232533:-1:exon
so has part: feature:7231959-7231991:-1:exon

position:7231959:-1
position: 7231959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7295384-7296429:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7293377-7293474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7290922-7290991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7288674-7288822:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7287573-7287625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7285581-7285678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7282499-7282634:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7281775-7281871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7279108-7279197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7277763-7277904:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7271659-7271758:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7270603-7270775:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7260543-7260640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7256989-7257150:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7252582-7252766:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7251620-7251881:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7251325-7251513:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7249789-7249970:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7249252-7249323:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7247851-7247971:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7247004-7247114:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7246176-7246325:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7244287-7244373:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7241365-7241561:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7239757-7239838:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7239449-7239546:-1:exon

position:7239449:-1
position: 7239449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7239546:-1
position: 7239546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7237607-7237778:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7232718-7232909:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7232409-7232533:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7231959-7231991:-1:exon

TARBP1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: TARBP1
product: TAR (HIV-1) RNA binding protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_003509253.1
SIO_010081: TARBP1
so part of: TARBP1
location: complement(join(7232419..7232533,7232718..7232909,7237607..7237684,7239757..7239838,7241365..7241561,7244287..7244373,7246176..7246325,7247004..7247114,7247851..7247971,7249252..7249323,7249789..7249970,7251325..7251513,7251620..7251881,7252582..7252766,7256989..7257150,7260543..7260640,7270603..7270775,7271659..7271758,7277763..7277904,7279108..7279197,7281775..7281871,7282499..7282634,7285581..7285678,7287573..7287625,7288674..7288822,7290922..7290991,7293377..7293474,7295384..7296429))
location: region:7232419-7296429:-1
so has part: feature:7295384-7296429:-1:exon
so has part: feature:7293377-7293474:-1:exon
so has part: feature:7290922-7290991:-1:exon
so has part: feature:7288674-7288822:-1:exon
so has part: feature:7287573-7287625:-1:exon
so has part: feature:7285581-7285678:-1:exon
so has part: feature:7282499-7282634:-1:exon
so has part: feature:7281775-7281871:-1:exon
so has part: feature:7279108-7279197:-1:exon
so has part: feature:7277763-7277904:-1:exon
so has part: feature:7271659-7271758:-1:exon
so has part: feature:7270603-7270775:-1:exon
so has part: feature:7260543-7260640:-1:exon
so has part: feature:7256989-7257150:-1:exon
so has part: feature:7252582-7252766:-1:exon
so has part: feature:7251620-7251881:-1:exon
so has part: feature:7251325-7251513:-1:exon
so has part: feature:7249789-7249970:-1:exon
so has part: feature:7249252-7249323:-1:exon
so has part: feature:7247851-7247971:-1:exon
so has part: feature:7247004-7247114:-1:exon
so has part: feature:7246176-7246325:-1:exon
so has part: feature:7244287-7244373:-1:exon
so has part: feature:7241365-7241561:-1:exon
so has part: feature:7239757-7239838:-1:exon
so has part: feature:7237607-7237684:-1:exon
so has part: feature:7232718-7232909:-1:exon
so has part: feature:7232419-7232533:-1:exon

position:7232419:-1
position: 7232419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7295384-7296429:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7293377-7293474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7290922-7290991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7288674-7288822:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7287573-7287625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7285581-7285678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7282499-7282634:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7281775-7281871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7279108-7279197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7277763-7277904:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7271659-7271758:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7270603-7270775:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7260543-7260640:-1:exon

urn:…
SIO_000300: 14
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urn:…
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urn:…
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urn:…
SIO_000300: 23
SIO_000628: feature:7244287-7244373:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7241365-7241561:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7239757-7239838:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7237607-7237684:-1:exon