Bos indicus x Bos taurus breed Angus x Brahman F1 hybrid chromosome 27, Bos_hybrid_MaternalHap_v2.0, whole genome shotgun sequence.
type: Entry
definition: Bos indicus x Bos taurus breed Angus x Brahman F1 hybrid chromosome 27, Bos_hybrid_MaternalHap_v2.0, whole genome shotgun sequence.
sequence version: NC_040102.1
sequence date: 2018-12-25
sequence: sequence
division: CON
label: NC_040102.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA508959
dblink: SAMN08473802
keyword: WGS
keyword: RefSeq
source: Bos indicus x Bos taurus (hybrid cattle)
organism: Bos indicus x Bos taurus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos hybrids.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM011830.1.\nAssembly name: Bos_hybrid_MaternalHap_v2.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of Adelaide on\n2018/11/30. The original whole-genome shotgun project has the\naccession PUFS00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of Adelaide\nAssembly Method :: TrioCanu v. 1.6\nAssembly Name :: Bos_hybrid_MaternalHap_v2.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 136.0x\nSequencing Technology :: PacBio Sequel; PacBio RSII; Illumina\n NextSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Bos indicus x Bos taurus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 45108716
topology: linear
so has quality: SO_0000987
location: 1..45108716
location: region:1-45108716:1
RO_0002162: 30522

NC_040102
type: RefSeq
SIO_000068: refseq

PRJNA508959
type: BioProject
SIO_000068: bioproject

SAMN08473802
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45108716:1
position: 45108716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-45108716:1:source
so part of: sequence
organism: Bos indicus x Bos taurus
mol type: genomic DNA
chromosome: 27
sex: male
tissue type: lung
dev stage: fetus
collected by: Stefan Hiendleder
breed: Angus x Brahman F1 hybrid

30522
type: Taxonomy
SIO_000068: taxonomy

LOC113885025
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(28911..36706)
location: region:28911-36706:-1
so has part: feature:28911-36706:-1:exon
subclass of: SO_0000011

113885025
type: Gene
SIO_000068: ncbigene

position:28911:-1
position: 28911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36706:-1
position: 36706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28911-36706:-1:exon

LOC113885025
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113885025
product: uncharacterized LOC113885025, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_003509102.1
SIO_010081: LOC113885025
subclass of: SO_0000673
so part of: LOC113885025
location: complement(join(28911..28946,30180..30344,36202..36706))
location: region:28911-36706:-1
so has part: feature:36202-36706:-1:exon
so has part: feature:30180-30344:-1:exon
so has part: feature:28911-28946:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36202-36706:-1:exon

position:36202:-1
position: 36202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30180-30344:-1:exon

position:30180:-1
position: 30180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30344:-1
position: 30344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:28911-28946:-1:exon

position:28946:-1
position: 28946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113885025
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113885025
product: uncharacterized LOC113885025, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XR_003509101.1
SIO_010081: LOC113885025
subclass of: SO_0000673
so part of: LOC113885025
location: complement(join(29258..30344,36202..36706))
location: region:29258-36706:-1
so has part: feature:36202-36706:-1:exon
so has part: feature:29258-30344:-1:exon

position:29258:-1
position: 29258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36202-36706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29258-30344:-1:exon

LOC113885101
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885101
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 152253..152371
location: region:152253-152371:1
so has part: feature:152253-152371:1:exon
subclass of: SO_0000573

113885101
type: Gene
SIO_000068: ncbigene

position:152253:1
position: 152253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152371:1
position: 152371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152253-152371:1:exon

LOC113885101
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885101
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509142.1
SIO_010081: LOC113885101
subclass of: SO_0000673
so part of: LOC113885101
location: 152253..152371
location: region:152253-152371:1
so has part: feature:152253-152371:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:152253-152371:1:exon

LOC113885112
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885112
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(170749..170867)
location: region:170749-170867:-1
so has part: feature:170749-170867:-1:exon

113885112
type: Gene
SIO_000068: ncbigene

position:170749:-1
position: 170749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170867:-1
position: 170867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170749-170867:-1:exon

LOC113885112
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885112
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC113885112
subclass of: SO_0000673
so part of: LOC113885112
location: complement(170749..170867)
location: region:170749-170867:-1
so has part: feature:170749-170867:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:170749-170867:-1:exon

LOC113885095
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885095
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(175226..175344)
location: region:175226-175344:-1
so has part: feature:175226-175344:-1:exon
subclass of: SO_0000573

113885095
type: Gene
SIO_000068: ncbigene

position:175226:-1
position: 175226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175344:-1
position: 175344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175226-175344:-1:exon

LOC113885095
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885095
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509136.1
SIO_010081: LOC113885095
subclass of: SO_0000673
so part of: LOC113885095
location: complement(175226..175344)
location: region:175226-175344:-1
so has part: feature:175226-175344:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175226-175344:-1:exon

ERICH1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: ERICH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(555388..588811)
location: region:555388-588811:-1
so has part: feature:555388-588811:-1:exon
subclass of: SO_0000010

113884915
type: Gene
SIO_000068: ncbigene

position:555388:-1
position: 555388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588811:-1
position: 588811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555388-588811:-1:exon

ERICH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ERICH1
product: glutamate rich 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 183 samples with support for all annotated introns
transcript id: XM_027530023.1
SIO_010081: ERICH1
subclass of: SO_0000673
so part of: ERICH1
location: complement(join(555388..555865,559133..559327,561710..562204,568947..569081,580154..580300,588770..588811))
location: region:555388-588811:-1
so has part: feature:588770-588811:-1:exon
so has part: feature:580154-580300:-1:exon
so has part: feature:568947-569081:-1:exon
so has part: feature:561710-562204:-1:exon
so has part: feature:559133-559327:-1:exon
so has part: feature:555388-555865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:588770-588811:-1:exon

position:588770:-1
position: 588770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:580154-580300:-1:exon

position:580154:-1
position: 580154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580300:-1
position: 580300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:568947-569081:-1:exon

position:568947:-1
position: 568947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569081:-1
position: 569081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:561710-562204:-1:exon

position:561710:-1
position: 561710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562204:-1
position: 562204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:559133-559327:-1:exon

position:559133:-1
position: 559133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559327:-1
position: 559327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:555388-555865:-1:exon

position:555865:-1
position: 555865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ERICH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ERICH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate-rich protein 1
translation: MAALRRHVFVGKVLKKLYPEVSHSQEKKAPVTPASRNPPEKGAPEREKGQSVPPETGGDTRVQPTRRLYTVGLPPEGWVPTLPEPLSCSSSESSSSSEDTGDQDLHDLPKRRRIRKHKSKKKFKNPNNIHVEPAESEKQQSLLQEKLQLRHTDGPTISKNKKRKLKKKQQMQRKKAAGSLTGASGVHFMYQPEETSSEQEDVRATDGESAGAATGGGAAGAVEERVLPLEEGGVPDAEEEEVKSTNEKADGILNFLKSTLEIYFYDGVSKDSDSGVFMESTKKLFKQLETHSVSPSDVFILDHMKTLLLLHDTKRLKSALDVFPEHCRMPLEYARVISVFFNYWITHILPEKNDE
SIO_010081: ERICH1
subclass of: SO_0000673
so part of: ERICH1
location: complement(join(555792..555865,559133..559327,561710..562204,568947..569081,580154..580300,588770..588791))
location: region:555792-588791:-1
so has part: feature:588770-588791:-1:exon
so has part: feature:580154-580300:-1:exon
so has part: feature:568947-569081:-1:exon
so has part: feature:561710-562204:-1:exon
so has part: feature:559133-559327:-1:exon
so has part: feature:555792-555865:-1:exon

XP_027385824.1
type: Protein
SIO_000068: ncbiprotein

position:555792:-1
position: 555792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588791:-1
position: 588791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588770-588791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580154-580300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568947-569081:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561710-562204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559133-559327:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555792-555865:-1:exon

LOC113884897
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 597860..842806
location: region:597860-842806:1
so has part: feature:597860-842806:1:exon
subclass of: SO_0000011

113884897
type: Gene
SIO_000068: ncbigene

position:597860:1
position: 597860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842806:1
position: 842806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597860-842806:1:exon

LOC113884897
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884897
product: uncharacterized LOC113884897
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003509040.1
SIO_010081: LOC113884897
subclass of: SO_0000673
so part of: LOC113884897
location: join(597860..598002,704424..704525,788469..788523,836011..836155,836349..836613,842660..842806)
location: region:597860-842806:1
so has part: feature:597860-598002:1:exon
so has part: feature:704424-704525:1:exon
so has part: feature:788469-788523:1:exon
so has part: feature:836011-836155:1:exon
so has part: feature:836349-836613:1:exon
so has part: feature:842660-842806:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597860-598002:1:exon

position:598002:1
position: 598002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:704424-704525:1:exon

position:704424:1
position: 704424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704525:1
position: 704525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:788469-788523:1:exon

position:788469:1
position: 788469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788523:1
position: 788523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:836011-836155:1:exon

position:836011:1
position: 836011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836155:1
position: 836155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:836349-836613:1:exon

position:836349:1
position: 836349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836613:1
position: 836613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:842660-842806:1:exon

position:842660:1
position: 842660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DLGAP2
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: DLGAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 967952..1243731
location: region:967952-1243731:1
so has part: feature:967952-1243731:1:exon
subclass of: SO_0000010

113884895
type: Gene
SIO_000068: ncbigene

position:967952:1
position: 967952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243731:1
position: 1243731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967952-1243731:1:exon

DLGAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: DLGAP2
product: DLG associated protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_027529990.1
SIO_010081: DLGAP2
subclass of: SO_0000673
so part of: DLGAP2
location: join(967952..967981,1117668..1117733,1145751..1146811,1155637..1155848,1177362..1177509,1181817..1182033,1208017..1208366,1209139..1209180,1215606..1215691,1217357..1217772,1225257..1225348,1234410..1234562,1236886..1243731)
location: region:967952-1243731:1
so has part: feature:967952-967981:1:exon
so has part: feature:1117668-1117733:1:exon
so has part: feature:1145751-1146811:1:exon
so has part: feature:1155637-1155848:1:exon
so has part: feature:1177362-1177509:1:exon
so has part: feature:1181817-1182033:1:exon
so has part: feature:1208017-1208366:1:exon
so has part: feature:1209139-1209180:1:exon
so has part: feature:1215606-1215691:1:exon
so has part: feature:1217357-1217772:1:exon
so has part: feature:1225257-1225348:1:exon
so has part: feature:1234410-1234562:1:exon
so has part: feature:1236886-1243731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:967952-967981:1:exon

position:967981:1
position: 967981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1117668-1117733:1:exon

position:1117668:1
position: 1117668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1117733:1
position: 1117733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1145751-1146811:1:exon

position:1145751:1
position: 1145751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146811:1
position: 1146811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1155637-1155848:1:exon

position:1155637:1
position: 1155637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155848:1
position: 1155848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1177362-1177509:1:exon

position:1177362:1
position: 1177362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177509:1
position: 1177509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1181817-1182033:1:exon

position:1181817:1
position: 1181817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182033:1
position: 1182033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1208017-1208366:1:exon

position:1208017:1
position: 1208017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1208366:1
position: 1208366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1209139-1209180:1:exon

position:1209139:1
position: 1209139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1209180:1
position: 1209180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1215606-1215691:1:exon

position:1215606:1
position: 1215606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215691:1
position: 1215691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1217357-1217772:1:exon

position:1217357:1
position: 1217357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217772:1
position: 1217772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1225257-1225348:1:exon

position:1225257:1
position: 1225257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1225348:1
position: 1225348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1234410-1234562:1:exon

position:1234410:1
position: 1234410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234562:1
position: 1234562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1236886-1243731:1:exon

position:1236886:1
position: 1236886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DLGAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: DLGAP2
product: DLG associated protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_027529991.1
SIO_010081: DLGAP2
subclass of: SO_0000673
so part of: DLGAP2
location: join(967952..967981,1117668..1117733,1145751..1146811,1155637..1155848,1177362..1177509,1181817..1182033,1208017..1208366,1215606..1215691,1217357..1217772,1225257..1225348,1234410..1234562,1236886..1243731)
location: region:967952-1243731:1
so has part: feature:967952-967981:1:exon
so has part: feature:1117668-1117733:1:exon
so has part: feature:1145751-1146811:1:exon
so has part: feature:1155637-1155848:1:exon
so has part: feature:1177362-1177509:1:exon
so has part: feature:1181817-1182033:1:exon
so has part: feature:1208017-1208366:1:exon
so has part: feature:1215606-1215691:1:exon
so has part: feature:1217357-1217772:1:exon
so has part: feature:1225257-1225348:1:exon
so has part: feature:1234410-1234562:1:exon
so has part: feature:1236886-1243731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:967952-967981:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1117668-1117733:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1145751-1146811:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1155637-1155848:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1177362-1177509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1181817-1182033:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1208017-1208366:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1215606-1215691:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1217357-1217772:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1225257-1225348:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1234410-1234562:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1236886-1243731:1:exon

DLGAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: DLGAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 2 isoform X1
translation: MKGLSGSRNPPLCSGHTCGLTPPEDCELGHLHHGPEARPPYLLSPADSCPLEHHRCSPRTSIHSDCVMLPVVLGDHVSSSTFPRMHYSSHYDSRDDCAVAHAGAKINRIPANLLDQFEKQLPLHRDGFHTLQYQRASAAAEQRSESPGRIRHLVHSVQKLFTKSHSLEGSSKGHVNGTRADGRADEHAHGHHAKHGRRSKSRERKVEGRPRGGPGSWWGSDDNLDSDSTCRASSALGRPHAEPLARCYPDALPGPFGDLSLRTSKSNNDVKCSACEGLALTPDTKYMKRSSWSTLTVSQAKEAYRKSSLHLDKPPGPPELKPPLRPCHYLQVPQDEWAGRPTGGRDDEIPCRRMRSGSYIKAMGDEDSGDSDSSPKTSPKLALRPEPLLTSIGQRPLGDLQTQSYLQAASDGPASHGLDPSANYNSPKFRSRNQSYMRAVSTLSQASCVSQMSEAEVNGQFESVCESVFSEVESQAMDALDLPGCFRTRSHSYLRAIQAGYSQDDECVPLTIPTDAASTIRPTGVTYASYKKTPPPVPPRTTSKPLISVTAQSSTESTQDAYQDSRAQRMAAWPPDGRGLYNSTDSLDSNKAMSLALETAAAQRHASEGQGGATRTGDKAILASKAEEFLKSQRSSIGVQDSEFPEHQPYPRSDVETATDSDTESRGLREYHSVGVQVEDEKRHGRFKRSNSVTAGVQADLELEGFPGHVTTEDKGLQFGSSFQRHSEPSTPTQYGAVRTVRTQGLFSYREDYRTPVDTANLPPPDPWLEPSLDAVDGGRVSPCHRDGAWFLKLLHTETKRMEGWCKEMEREAEENDLVEEVLGKIRSAVGSAQLLMSQKFQQFYWLCQQNMDPSAMPRPTSQDLAGYWDMLQLSVQDVSMKFDELHQLKLTDWKVVESPERKEERKVPPPIPKKPPRGKLPITREKSLDLPDRQRQEARRRLAAAKRAASFRQSSASERADSIEIYIPEAQTRL
SIO_010081: DLGAP2
subclass of: SO_0000673
so part of: DLGAP2
location: join(1145819..1146811,1155637..1155848,1177362..1177509,1181817..1182033,1208017..1208366,1209139..1209180,1215606..1215691,1217357..1217772,1225257..1225348,1234410..1234562,1236886..1237104)
location: region:1145819-1237104:1
so has part: feature:1145819-1146811:1:exon
so has part: feature:1155637-1155848:1:exon
so has part: feature:1177362-1177509:1:exon
so has part: feature:1181817-1182033:1:exon
so has part: feature:1208017-1208366:1:exon
so has part: feature:1209139-1209180:1:exon
so has part: feature:1215606-1215691:1:exon
so has part: feature:1217357-1217772:1:exon
so has part: feature:1225257-1225348:1:exon
so has part: feature:1234410-1234562:1:exon
so has part: feature:1236886-1237104:1:exon

XP_027385791.1
type: Protein
SIO_000068: ncbiprotein

position:1145819:1
position: 1145819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237104:1
position: 1237104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145819-1146811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155637-1155848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177362-1177509:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181817-1182033:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1208017-1208366:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1209139-1209180:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1215606-1215691:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1217357-1217772:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1225257-1225348:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1234410-1234562:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1236886-1237104:1:exon

DLGAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: DLGAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 2 isoform X2
translation: MKGLSGSRNPPLCSGHTCGLTPPEDCELGHLHHGPEARPPYLLSPADSCPLEHHRCSPRTSIHSDCVMLPVVLGDHVSSSTFPRMHYSSHYDSRDDCAVAHAGAKINRIPANLLDQFEKQLPLHRDGFHTLQYQRASAAAEQRSESPGRIRHLVHSVQKLFTKSHSLEGSSKGHVNGTRADGRADEHAHGHHAKHGRRSKSRERKVEGRPRGGPGSWWGSDDNLDSDSTCRASSALGRPHAEPLARCYPDALPGPFGDLSLRTSKSNNDVKCSACEGLALTPDTKYMKRSSWSTLTVSQAKEAYRKSSLHLDKPPGPPELKPPLRPCHYLQVPQDEWAGRPTGGRDDEIPCRRMRSGSYIKAMGDEDSGDSDSSPKTSPKLALRPEPLLTSIGQRPLGDLQTQSYLQAASDGPASHGLDPSANYNSPKFRSRNQSYMRAVSTLSQASCVSQMSEAEVNGQFESVCESVFSEVESQAMDALDLPGCFRTRSHSYLRAIQAGYSQDDECVPLTIPTDAASTIRPTGVTYASYKKTPPPVPPRTTSKPLISVTAQSSTESTQDAYQDSRAQRMAAWPPDGRGLYNSTDSLDSNKAMSLALETAAAQRHASEGQGGATRTGDKAILASKAEEFLKSQRSSIGVQVETATDSDTESRGLREYHSVGVQVEDEKRHGRFKRSNSVTAGVQADLELEGFPGHVTTEDKGLQFGSSFQRHSEPSTPTQYGAVRTVRTQGLFSYREDYRTPVDTANLPPPDPWLEPSLDAVDGGRVSPCHRDGAWFLKLLHTETKRMEGWCKEMEREAEENDLVEEVLGKIRSAVGSAQLLMSQKFQQFYWLCQQNMDPSAMPRPTSQDLAGYWDMLQLSVQDVSMKFDELHQLKLTDWKVVESPERKEERKVPPPIPKKPPRGKLPITREKSLDLPDRQRQEARRRLAAAKRAASFRQSSASERADSIEIYIPEAQTRL
SIO_010081: DLGAP2
subclass of: SO_0000673
so part of: DLGAP2
location: join(1145819..1146811,1155637..1155848,1177362..1177509,1181817..1182033,1208017..1208366,1215606..1215691,1217357..1217772,1225257..1225348,1234410..1234562,1236886..1237104)
location: region:1145819-1237104:1
so has part: feature:1145819-1146811:1:exon
so has part: feature:1155637-1155848:1:exon
so has part: feature:1177362-1177509:1:exon
so has part: feature:1181817-1182033:1:exon
so has part: feature:1208017-1208366:1:exon
so has part: feature:1215606-1215691:1:exon
so has part: feature:1217357-1217772:1:exon
so has part: feature:1225257-1225348:1:exon
so has part: feature:1234410-1234562:1:exon
so has part: feature:1236886-1237104:1:exon

XP_027385792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1145819-1146811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155637-1155848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177362-1177509:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181817-1182033:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1208017-1208366:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1215606-1215691:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1217357-1217772:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1225257-1225348:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1234410-1234562:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1236886-1237104:1:exon

LOC113884898
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1206824..1213513)
location: region:1206824-1213513:-1
so has part: feature:1206824-1213513:-1:exon
subclass of: SO_0000011

113884898
type: Gene
SIO_000068: ncbigene

position:1206824:-1
position: 1206824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213513:-1
position: 1213513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206824-1213513:-1:exon

LOC113884898
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884898
product: uncharacterized LOC113884898
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003509041.1
SIO_010081: LOC113884898
subclass of: SO_0000673
so part of: LOC113884898
location: complement(join(1206824..1206969,1207136..1207294,1207571..1207665,1212823..1213513))
location: region:1206824-1213513:-1
so has part: feature:1212823-1213513:-1:exon
so has part: feature:1207571-1207665:-1:exon
so has part: feature:1207136-1207294:-1:exon
so has part: feature:1206824-1206969:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1212823-1213513:-1:exon

position:1212823:-1
position: 1212823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1207571-1207665:-1:exon

position:1207571:-1
position: 1207571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207665:-1
position: 1207665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1207136-1207294:-1:exon

position:1207136:-1
position: 1207136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207294:-1
position: 1207294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1206824-1206969:-1:exon

position:1206969:-1
position: 1206969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLN8
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: CLN8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1289894..1307548
location: region:1289894-1307548:1
so has part: feature:1289894-1307548:1:exon
subclass of: SO_0000010

113884786
type: Gene
SIO_000068: ncbigene

position:1289894:1
position: 1289894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1307548:1
position: 1307548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1289894-1307548:1:exon

CLN8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CLN8
product: CLN8, transmembrane ER and ERGIC protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_027529725.1
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: join(1289894..1290201,1300190..1300802,1306688..1307548)
location: region:1289894-1307548:1
so has part: feature:1289894-1290201:1:exon
so has part: feature:1300190-1300802:1:exon
so has part: feature:1306688-1307548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1289894-1290201:1:exon

position:1290201:1
position: 1290201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1300190-1300802:1:exon

position:1300190:1
position: 1300190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300802:1
position: 1300802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1306688-1307548:1:exon

position:1306688:1
position: 1306688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CLN8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CLN8
product: CLN8, transmembrane ER and ERGIC protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XM_027529723.1
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: join(1293703..1293880,1300190..1300802,1306688..1307548)
location: region:1293703-1307548:1
so has part: feature:1293703-1293880:1:exon
so has part: feature:1300190-1300802:1:exon
so has part: feature:1306688-1307548:1:exon

position:1293703:1
position: 1293703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293703-1293880:1:exon

position:1293880:1
position: 1293880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1300190-1300802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306688-1307548:1:exon

CLN8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CLN8
product: CLN8, transmembrane ER and ERGIC protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 35 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_027529722.1
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: join(1294625..1294847,1294991..1295061,1300190..1300802,1306688..1307548)
location: region:1294625-1307548:1
so has part: feature:1294625-1294847:1:exon
so has part: feature:1294991-1295061:1:exon
so has part: feature:1300190-1300802:1:exon
so has part: feature:1306688-1307548:1:exon

position:1294625:1
position: 1294625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294625-1294847:1:exon

position:1294847:1
position: 1294847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1294991-1295061:1:exon

position:1294991:1
position: 1294991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295061:1
position: 1295061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1300190-1300802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306688-1307548:1:exon

CLN8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CLN8
product: CLN8, transmembrane ER and ERGIC protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 192 samples with support for all annotated introns
transcript id: XM_027529720.1
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: join(1294632..1294847,1300190..1300802,1306688..1307548)
location: region:1294632-1307548:1
so has part: feature:1294632-1294847:1:exon
so has part: feature:1300190-1300802:1:exon
so has part: feature:1306688-1307548:1:exon

position:1294632:1
position: 1294632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294632-1294847:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1300190-1300802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306688-1307548:1:exon

CLN8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CLN8
product: CLN8, transmembrane ER and ERGIC protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_027529724.1
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: join(1294908..1294990,1300190..1300802,1306688..1307548)
location: region:1294908-1307548:1
so has part: feature:1294908-1294990:1:exon
so has part: feature:1300190-1300802:1:exon
so has part: feature:1306688-1307548:1:exon

position:1294908:1
position: 1294908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294908-1294990:1:exon

position:1294990:1
position: 1294990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1300190-1300802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306688-1307548:1:exon

CLN8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CLN8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CLN8
translation: MGSMSLLGAGALDLDYTSGRVRGVLVAAGCAFYLGVFVVCHRLSSSLNATYRSLAAREQVFWNLAATRAVFGIQGTAAGLWALLLDPVLQADKALGQQDWCWFHITTATGFFFFENLALHVSNALFHTFDGFLAVHHLFAFLGFLGSAVNLQAGHYLPMVTLLLEMSTPFTCISWMLLKAGCANSRLWRLNQWAMVHLFHCRMVLTYHMWWVCLGHWAGLARSLFPPHLALFVVGLALLTLLINPYWTRKKTQQLLNPVDWNFAPGTPNGPAQPKKAR
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: join(1300266..1300802,1306688..1306987)
location: region:1300266-1306987:1
so has part: feature:1300266-1300802:1:exon
so has part: feature:1306688-1306987:1:exon

XP_027385521.1
type: Protein
SIO_000068: ncbiprotein

position:1300266:1
position: 1300266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306987:1
position: 1306987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1300266-1300802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306688-1306987:1:exon

CLN8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CLN8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CLN8
translation: MGSMSLLGAGALDLDYTSGRVRGVLVAAGCAFYLGVFVVCHRLSSSLNATYRSLAAREQVFWNLAATRAVFGIQGTAAGLWALLLDPVLQADKALGQQDWCWFHITTATGFFFFENLALHVSNALFHTFDGFLAVHHLFAFLGFLGSAVNLQAGHYLPMVTLLLEMSTPFTCISWMLLKAGCANSRLWRLNQWAMVHLFHCRMVLTYHMWWVCLGHWAGLARSLFPPHLALFVVGLALLTLLINPYWTRKKTQQLLNPVDWNFAPGTPNGPAQPKKAR
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: join(1300266..1300802,1306688..1306987)
location: region:1300266-1306987:1
so has part: feature:1300266-1300802:1:exon
so has part: feature:1306688-1306987:1:exon

XP_027385523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1300266-1300802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306688-1306987:1:exon

CLN8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CLN8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CLN8
translation: MGSMSLLGAGALDLDYTSGRVRGVLVAAGCAFYLGVFVVCHRLSSSLNATYRSLAAREQVFWNLAATRAVFGIQGTAAGLWALLLDPVLQADKALGQQDWCWFHITTATGFFFFENLALHVSNALFHTFDGFLAVHHLFAFLGFLGSAVNLQAGHYLPMVTLLLEMSTPFTCISWMLLKAGCANSRLWRLNQWAMVHLFHCRMVLTYHMWWVCLGHWAGLARSLFPPHLALFVVGLALLTLLINPYWTRKKTQQLLNPVDWNFAPGTPNGPAQPKKAR
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: join(1300266..1300802,1306688..1306987)
location: region:1300266-1306987:1
so has part: feature:1300266-1300802:1:exon
so has part: feature:1306688-1306987:1:exon

XP_027385524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1300266-1300802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306688-1306987:1:exon

CLN8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CLN8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CLN8
translation: MGSMSLLGAGALDLDYTSGRVRGVLVAAGCAFYLGVFVVCHRLSSSLNATYRSLAAREQVFWNLAATRAVFGIQGTAAGLWALLLDPVLQADKALGQQDWCWFHITTATGFFFFENLALHVSNALFHTFDGFLAVHHLFAFLGFLGSAVNLQAGHYLPMVTLLLEMSTPFTCISWMLLKAGCANSRLWRLNQWAMVHLFHCRMVLTYHMWWVCLGHWAGLARSLFPPHLALFVVGLALLTLLINPYWTRKKTQQLLNPVDWNFAPGTPNGPAQPKKAR
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: join(1300266..1300802,1306688..1306987)
location: region:1300266-1306987:1
so has part: feature:1300266-1300802:1:exon
so has part: feature:1306688-1306987:1:exon

XP_027385525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1300266-1300802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306688-1306987:1:exon

CLN8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CLN8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CLN8
translation: MGSMSLLGAGALDLDYTSGRVRGVLVAAGCAFYLGVFVVCHRLSSSLNATYRSLAAREQVFWNLAATRAVFGIQGTAAGLWALLLDPVLQADKALGQQDWCWFHITTATGFFFFENLALHVSNALFHTFDGFLAVHHLFAFLGFLGSAVNLQAGHYLPMVTLLLEMSTPFTCISWMLLKAGCANSRLWRLNQWAMVHLFHCRMVLTYHMWWVCLGHWAGLARSLFPPHLALFVVGLALLTLLINPYWTRKKTQQLLNPVDWNFAPGTPNGPAQPKKAR
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: join(1300266..1300802,1306688..1306987)
location: region:1300266-1306987:1
so has part: feature:1300266-1300802:1:exon
so has part: feature:1306688-1306987:1:exon

XP_027385526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1300266-1300802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306688-1306987:1:exon

LOC113884883
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1310878..1317996
location: region:1310878-1317996:1
so has part: feature:1310878-1317996:1:exon
subclass of: SO_0000011

113884883
type: Gene
SIO_000068: ncbigene

position:1310878:1
position: 1310878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317996:1
position: 1317996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310878-1317996:1:exon

LOC113884883
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884883
product: uncharacterized LOC113884883
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XR_003509039.1
SIO_010081: LOC113884883
subclass of: SO_0000673
so part of: LOC113884883
location: join(1310878..1311710,1312518..1317996)
location: region:1310878-1317996:1
so has part: feature:1310878-1311710:1:exon
so has part: feature:1312518-1317996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1310878-1311710:1:exon

position:1311710:1
position: 1311710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1312518-1317996:1:exon

position:1312518:1
position: 1312518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884955
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1335914..1353487
location: region:1335914-1353487:1
so has part: feature:1335914-1353487:1:exon
subclass of: SO_0000010

113884955
type: Gene
SIO_000068: ncbigene

position:1335914:1
position: 1335914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1353487:1
position: 1353487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1335914-1353487:1:exon

LOC113884955
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: LOC113884955
product: CUB and sushi domain-containing protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003509065.1
SIO_010081: LOC113884955
so part of: LOC113884955
location: join(1335914..1336606,1337329..1337511,1342433..1342609,1343240..1343419,1345671..1345905,1346363..1346536,1348455..1348528,1350429..1350540,1352962..1353487)
location: region:1335914-1353487:1
so has part: feature:1335914-1336606:1:exon
so has part: feature:1337329-1337511:1:exon
so has part: feature:1342433-1342609:1:exon
so has part: feature:1343240-1343419:1:exon
so has part: feature:1345671-1345905:1:exon
so has part: feature:1346363-1346536:1:exon
so has part: feature:1348455-1348528:1:exon
so has part: feature:1350429-1350540:1:exon
so has part: feature:1352962-1353487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1335914-1336606:1:exon

position:1336606:1
position: 1336606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1337329-1337511:1:exon

position:1337329:1
position: 1337329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337511:1
position: 1337511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1342433-1342609:1:exon

position:1342433:1
position: 1342433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1342609:1
position: 1342609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1343240-1343419:1:exon

position:1343240:1
position: 1343240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343419:1
position: 1343419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1345671-1345905:1:exon

position:1345671:1
position: 1345671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1345905:1
position: 1345905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1346363-1346536:1:exon

position:1346363:1
position: 1346363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1346536:1
position: 1346536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1348455-1348528:1:exon

position:1348455:1
position: 1348455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1348528:1
position: 1348528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1350429-1350540:1:exon

position:1350429:1
position: 1350429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350540:1
position: 1350540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1352962-1353487:1:exon

position:1352962:1
position: 1352962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884955
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884955
product: CUB and sushi domain-containing protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_027530058.1
SIO_010081: LOC113884955
subclass of: SO_0000673
so part of: LOC113884955
location: join(1335914..1336606,1337329..1337511,1342433..1342609,1343240..1343419,1345671..1346165)
location: region:1335914-1346165:1
so has part: feature:1335914-1336606:1:exon
so has part: feature:1337329-1337511:1:exon
so has part: feature:1342433-1342609:1:exon
so has part: feature:1343240-1343419:1:exon
so has part: feature:1345671-1346165:1:exon

position:1346165:1
position: 1346165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1335914-1336606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1337329-1337511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1342433-1342609:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1343240-1343419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1345671-1346165:1:exon

LOC113884955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUB and sushi domain-containing protein 1-like
translation: MGYQLQGSAERTCLLNGSWSGLQPVCEAVSCGNPGTPTHGKIVSSDGVLFSSSVVYACWDGYRTSGLTTRHCTANGTWTGTAPDCTLISCGDPGTLANGIQFGTDFTFNKTVSYQCNPGYTMEPATSPTIRCTKDSTWNHSKPTCKAVTCGQPPLVQEGKVEGTDFHWGASISYSCAHGFQLSQPAIFSGEGCCCCC
SIO_010081: LOC113884955
subclass of: SO_0000673
so part of: LOC113884955
location: join(1337430..1337511,1342433..1342609,1343240..1343419,1345671..1345825)
location: region:1337430-1345825:1
so has part: feature:1337430-1337511:1:exon
so has part: feature:1342433-1342609:1:exon
so has part: feature:1343240-1343419:1:exon
so has part: feature:1345671-1345825:1:exon

XP_027385859.1
type: Protein
SIO_000068: ncbiprotein

position:1337430:1
position: 1337430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1345825:1
position: 1345825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337430-1337511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1342433-1342609:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1343240-1343419:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1345671-1345825:1:exon

ARHGEF10
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: ARHGEF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1403154..1464794
location: region:1403154-1464794:1
so has part: feature:1403154-1464794:1:exon
subclass of: SO_0000010

113885070
type: Gene
SIO_000068: ncbigene

position:1403154:1
position: 1403154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1464794:1
position: 1464794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403154-1464794:1:exon

ARHGEF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ARHGEF10
product: Rho guanine nucleotide exchange factor 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 ESTs, 5 long SRA reads, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_027530220.1
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
location: join(1403154..1403250,1415014..1415163,1418832..1419077,1419649..1419915,1421473..1421536,1422976..1423052,1424805..1424861,1427126..1427289,1432161..1432275,1433188..1433294,1436126..1436203,1436417..1436596,1437263..1437379,1438215..1438307,1439005..1439175,1440874..1441019,1441203..1441396,1446196..1446311,1446675..1446802,1446961..1447061,1447233..1447354,1448004..1448090,1448736..1448938,1449494..1449651,1451697..1451839,1457586..1457760,1460867..1460989,1463161..1464794)
location: region:1403154-1464794:1
so has part: feature:1403154-1403250:1:exon
so has part: feature:1415014-1415163:1:exon
so has part: feature:1418832-1419077:1:exon
so has part: feature:1419649-1419915:1:exon
so has part: feature:1421473-1421536:1:exon
so has part: feature:1422976-1423052:1:exon
so has part: feature:1424805-1424861:1:exon
so has part: feature:1427126-1427289:1:exon
so has part: feature:1432161-1432275:1:exon
so has part: feature:1433188-1433294:1:exon
so has part: feature:1436126-1436203:1:exon
so has part: feature:1436417-1436596:1:exon
so has part: feature:1437263-1437379:1:exon
so has part: feature:1438215-1438307:1:exon
so has part: feature:1439005-1439175:1:exon
so has part: feature:1440874-1441019:1:exon
so has part: feature:1441203-1441396:1:exon
so has part: feature:1446196-1446311:1:exon
so has part: feature:1446675-1446802:1:exon
so has part: feature:1446961-1447061:1:exon
so has part: feature:1447233-1447354:1:exon
so has part: feature:1448004-1448090:1:exon
so has part: feature:1448736-1448938:1:exon
so has part: feature:1449494-1449651:1:exon
so has part: feature:1451697-1451839:1:exon
so has part: feature:1457586-1457760:1:exon
so has part: feature:1460867-1460989:1:exon
so has part: feature:1463161-1464794:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1403154-1403250:1:exon

position:1403250:1
position: 1403250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1415014-1415163:1:exon

position:1415014:1
position: 1415014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1415163:1
position: 1415163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1418832-1419077:1:exon

position:1418832:1
position: 1418832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419077:1
position: 1419077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1419649-1419915:1:exon

position:1419649:1
position: 1419649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419915:1
position: 1419915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1421473-1421536:1:exon

position:1421473:1
position: 1421473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421536:1
position: 1421536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1422976-1423052:1:exon

position:1422976:1
position: 1422976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423052:1
position: 1423052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1424805-1424861:1:exon

position:1424805:1
position: 1424805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424861:1
position: 1424861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1427126-1427289:1:exon

position:1427126:1
position: 1427126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427289:1
position: 1427289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1432161-1432275:1:exon

position:1432161:1
position: 1432161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432275:1
position: 1432275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1433188-1433294:1:exon

position:1433188:1
position: 1433188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1433294:1
position: 1433294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1436126-1436203:1:exon

position:1436126:1
position: 1436126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436203:1
position: 1436203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1436417-1436596:1:exon

position:1436417:1
position: 1436417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436596:1
position: 1436596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1437263-1437379:1:exon

position:1437263:1
position: 1437263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437379:1
position: 1437379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1438215-1438307:1:exon

position:1438215:1
position: 1438215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438307:1
position: 1438307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1439005-1439175:1:exon

position:1439005:1
position: 1439005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439175:1
position: 1439175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1440874-1441019:1:exon

position:1440874:1
position: 1440874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441019:1
position: 1441019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1441203-1441396:1:exon

position:1441203:1
position: 1441203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441396:1
position: 1441396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1446196-1446311:1:exon

position:1446196:1
position: 1446196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446311:1
position: 1446311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1446675-1446802:1:exon

position:1446675:1
position: 1446675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446802:1
position: 1446802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1446961-1447061:1:exon

position:1446961:1
position: 1446961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447061:1
position: 1447061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1447233-1447354:1:exon

position:1447233:1
position: 1447233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447354:1
position: 1447354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1448004-1448090:1:exon

position:1448004:1
position: 1448004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1448090:1
position: 1448090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1448736-1448938:1:exon

position:1448736:1
position: 1448736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1448938:1
position: 1448938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1449494-1449651:1:exon

position:1449494:1
position: 1449494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1449651:1
position: 1449651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1451697-1451839:1:exon

position:1451697:1
position: 1451697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451839:1
position: 1451839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1457586-1457760:1:exon

position:1457586:1
position: 1457586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457760:1
position: 1457760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1460867-1460989:1:exon

position:1460867:1
position: 1460867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1460989:1
position: 1460989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1463161-1464794:1:exon

position:1463161:1
position: 1463161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGEF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ARHGEF10
product: Rho guanine nucleotide exchange factor 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 ESTs, 5 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_027530218.1
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
location: join(1403163..1403250,1415014..1415163,1418832..1419077,1419649..1419915,1421473..1421536,1422976..1423052,1424805..1424861,1427126..1427289,1429551..1429667,1432161..1432275,1433188..1433294,1436126..1436203,1436417..1436596,1437263..1437379,1438215..1438307,1439005..1439175,1440874..1441019,1441203..1441396,1446196..1446311,1446675..1446802,1446961..1447061,1447233..1447354,1448004..1448090,1448736..1448938,1449494..1449651,1451697..1451839,1457586..1457760,1460867..1460989,1463161..1464794)
location: region:1403163-1464794:1
so has part: feature:1403163-1403250:1:exon
so has part: feature:1415014-1415163:1:exon
so has part: feature:1418832-1419077:1:exon
so has part: feature:1419649-1419915:1:exon
so has part: feature:1421473-1421536:1:exon
so has part: feature:1422976-1423052:1:exon
so has part: feature:1424805-1424861:1:exon
so has part: feature:1427126-1427289:1:exon
so has part: feature:1429551-1429667:1:exon
so has part: feature:1432161-1432275:1:exon
so has part: feature:1433188-1433294:1:exon
so has part: feature:1436126-1436203:1:exon
so has part: feature:1436417-1436596:1:exon
so has part: feature:1437263-1437379:1:exon
so has part: feature:1438215-1438307:1:exon
so has part: feature:1439005-1439175:1:exon
so has part: feature:1440874-1441019:1:exon
so has part: feature:1441203-1441396:1:exon
so has part: feature:1446196-1446311:1:exon
so has part: feature:1446675-1446802:1:exon
so has part: feature:1446961-1447061:1:exon
so has part: feature:1447233-1447354:1:exon
so has part: feature:1448004-1448090:1:exon
so has part: feature:1448736-1448938:1:exon
so has part: feature:1449494-1449651:1:exon
so has part: feature:1451697-1451839:1:exon
so has part: feature:1457586-1457760:1:exon
so has part: feature:1460867-1460989:1:exon
so has part: feature:1463161-1464794:1:exon

position:1403163:1
position: 1403163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403163-1403250:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1415014-1415163:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1418832-1419077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1419649-1419915:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1421473-1421536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1422976-1423052:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1424805-1424861:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1427126-1427289:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1429551-1429667:1:exon

position:1429551:1
position: 1429551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429667:1
position: 1429667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1432161-1432275:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1433188-1433294:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1436126-1436203:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1436417-1436596:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1437263-1437379:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1438215-1438307:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1439005-1439175:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1440874-1441019:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1441203-1441396:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1446196-1446311:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1446675-1446802:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1446961-1447061:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1447233-1447354:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1448004-1448090:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1448736-1448938:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1449494-1449651:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1451697-1451839:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1457586-1457760:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1460867-1460989:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1463161-1464794:1:exon

ARHGEF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ARHGEF10
product: Rho guanine nucleotide exchange factor 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 ESTs, 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns
transcript id: XM_027530219.1
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
location: join(1403163..1403250,1415014..1415163,1418832..1419077,1419649..1419915,1421473..1421536,1422976..1423052,1424805..1424861,1427126..1427289,1429551..1429667,1432161..1432275,1433188..1433294,1436126..1436203,1436417..1436596,1437263..1437379,1438218..1438307,1439005..1439175,1440874..1441019,1441203..1441396,1446196..1446311,1446675..1446802,1446961..1447061,1447233..1447354,1448004..1448090,1448736..1448938,1449494..1449651,1451697..1451839,1457586..1457760,1460867..1460989,1463161..1464794)
location: region:1403163-1464794:1
so has part: feature:1403163-1403250:1:exon
so has part: feature:1415014-1415163:1:exon
so has part: feature:1418832-1419077:1:exon
so has part: feature:1419649-1419915:1:exon
so has part: feature:1421473-1421536:1:exon
so has part: feature:1422976-1423052:1:exon
so has part: feature:1424805-1424861:1:exon
so has part: feature:1427126-1427289:1:exon
so has part: feature:1429551-1429667:1:exon
so has part: feature:1432161-1432275:1:exon
so has part: feature:1433188-1433294:1:exon
so has part: feature:1436126-1436203:1:exon
so has part: feature:1436417-1436596:1:exon
so has part: feature:1437263-1437379:1:exon
so has part: feature:1438218-1438307:1:exon
so has part: feature:1439005-1439175:1:exon
so has part: feature:1440874-1441019:1:exon
so has part: feature:1441203-1441396:1:exon
so has part: feature:1446196-1446311:1:exon
so has part: feature:1446675-1446802:1:exon
so has part: feature:1446961-1447061:1:exon
so has part: feature:1447233-1447354:1:exon
so has part: feature:1448004-1448090:1:exon
so has part: feature:1448736-1448938:1:exon
so has part: feature:1449494-1449651:1:exon
so has part: feature:1451697-1451839:1:exon
so has part: feature:1457586-1457760:1:exon
so has part: feature:1460867-1460989:1:exon
so has part: feature:1463161-1464794:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1403163-1403250:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1415014-1415163:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1418832-1419077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1419649-1419915:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1421473-1421536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1422976-1423052:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1424805-1424861:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1427126-1427289:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1429551-1429667:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1432161-1432275:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1433188-1433294:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1436126-1436203:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1436417-1436596:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1437263-1437379:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1438218-1438307:1:exon

position:1438218:1
position: 1438218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1439005-1439175:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1440874-1441019:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1441203-1441396:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1446196-1446311:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1446675-1446802:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1446961-1447061:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1447233-1447354:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1448004-1448090:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1448736-1448938:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1449494-1449651:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1451697-1451839:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1457586-1457760:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1460867-1460989:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1463161-1464794:1:exon

ARHGEF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ARHGEF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 10 isoform X1
translation: MDQPGLPAPAREENEVKYDTNNNEEEEEGEQLDLDSGDEAPEADRQAPGSAEAGDAGADAPATAATAATAGPCASSGHHPGTSQPTCGLDRPGEGCEKGPGVEPLKPGVPSRVNPYSVIDITPLQEDQPPPPDPDAEGEGGGLHVPSGYLVPVPCGYAVPSSLPLLLPAYTSPVLPAPPADPAETQEAAEDSQLNSLSSEDPANSEDPDQKEDSALARWVADPANTAWMENPEEAIYDDVPRENSDSEPDEMIYDDVENGDEGGHSSLEYGWSSSEFESYEEQSDSESRSGVPRSFLRGDHRKQLSHDLTRLKEHYERKMRELMANTVGAVEIQQLKHKHELKMQKLVRAAREGTKDGLEKTKAAVKRGRSFIRTKSFISADHRSCLEEEQNVFIDVDCKHPEAILTPMPEGLSQQQVVRRYILGSIVDSEKNYVDALKRILEQYEKPLWEMEPKVLSERKLRTVFFRVKEVLQCHCLLQIALAGRVAEWDSVEMIGDVFVASFSKSMVLDAYSEYVNNFSTAVAILKKTCATKPAFLEFLKQCQESSPDRVTLHSLMTKPIQRFPQFILLLQDMLKNTPRGHPDRLPLQMALTELETLAEKLNERKRDADQRCEIKQIAKAINERYLNKLLSSGSRYLIRSDDVIETVYNDRGEIMKTKERRLFMLNDVLMCATVSTRAPSSRSASHDGGAVTSGQRYLLKWSVPLGQAEVVEYGGGDGAAEGGRCPTGPAPESLLAASTKPHRVYVGPGQLYQDLQNLLHDLSVIGHITQLVGNLKGNYQNLNPLVAQDWMSGLQRLILKKEEEIRAADCCRVQLQLPGKQDKSGRPTFFTAVFNTFTPAIKESWINSLQMAKLALEEENHLGWFCVEDDGNQIRKERHPLLLGHMPVTVAKQQEFKIECAVYNPEPYLNNENQSDSFSVAHGFLWIGSCTSQMGQIAIVSFHNSSPKVIECFNVESRVLCMVYVPAEDRPREPEGGGRVLGVPAVCLGTEEGSISIYKSSQGCKKVRLQHFFTPEKSTVMSLACTAQSLYAGLVNGAVAVYARADDGSWNSEPQTVIKLGVLPVRSLLLMEDTLWAASGGQVFIISVETLAVEGQLEAHQEEGMVVSHMAIAGVGIWVAFTSGSTLRLFHTETLKHLQDVNIATPVHHMLPGHQRLSVTSLLVCHGLLMVGTSLGVVVALPVPRLQGIPKVTGRGLVSHHAHHGPVKFLVVAAAALKADKDRPRDSPPPGADPQDDEQRDVPSSEGPGLCMGRGGPDAVWLGTSPGSITQGSDVSSSSGSPTPSQGSGSLEPRPEESLAQDLLRLPCTSPSRGRRARRPRASSVLVACGGQGHRRVSRKARPQRPEELASSLMVWQIPLLHV
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
location: join(1415127..1415163,1418832..1419077,1419649..1419915,1421473..1421536,1422976..1423052,1424805..1424861,1427126..1427289,1429551..1429667,1432161..1432275,1433188..1433294,1436126..1436203,1436417..1436596,1437263..1437379,1438215..1438307,1439005..1439175,1440874..1441019,1441203..1441396,1446196..1446311,1446675..1446802,1446961..1447061,1447233..1447354,1448004..1448090,1448736..1448938,1449494..1449651,1451697..1451839,1457586..1457760,1460867..1460989,1463161..1463672)
location: region:1415127-1463672:1
so has part: feature:1415127-1415163:1:exon
so has part: feature:1418832-1419077:1:exon
so has part: feature:1419649-1419915:1:exon
so has part: feature:1421473-1421536:1:exon
so has part: feature:1422976-1423052:1:exon
so has part: feature:1424805-1424861:1:exon
so has part: feature:1427126-1427289:1:exon
so has part: feature:1429551-1429667:1:exon
so has part: feature:1432161-1432275:1:exon
so has part: feature:1433188-1433294:1:exon
so has part: feature:1436126-1436203:1:exon
so has part: feature:1436417-1436596:1:exon
so has part: feature:1437263-1437379:1:exon
so has part: feature:1438215-1438307:1:exon
so has part: feature:1439005-1439175:1:exon
so has part: feature:1440874-1441019:1:exon
so has part: feature:1441203-1441396:1:exon
so has part: feature:1446196-1446311:1:exon
so has part: feature:1446675-1446802:1:exon
so has part: feature:1446961-1447061:1:exon
so has part: feature:1447233-1447354:1:exon
so has part: feature:1448004-1448090:1:exon
so has part: feature:1448736-1448938:1:exon
so has part: feature:1449494-1449651:1:exon
so has part: feature:1451697-1451839:1:exon
so has part: feature:1457586-1457760:1:exon
so has part: feature:1460867-1460989:1:exon
so has part: feature:1463161-1463672:1:exon

XP_027386019.1
type: Protein
SIO_000068: ncbiprotein

position:1415127:1
position: 1415127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1463672:1
position: 1463672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1415127-1415163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1418832-1419077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419649-1419915:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1421473-1421536:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1422976-1423052:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1424805-1424861:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427126-1427289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1429551-1429667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1432161-1432275:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1433188-1433294:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1436126-1436203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1436417-1436596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1437263-1437379:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1438215-1438307:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1439005-1439175:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1440874-1441019:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1441203-1441396:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1446196-1446311:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1446675-1446802:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1446961-1447061:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1447233-1447354:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1448004-1448090:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1448736-1448938:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1449494-1449651:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1451697-1451839:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1457586-1457760:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1460867-1460989:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1463161-1463672:1:exon

ARHGEF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ARHGEF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 10 isoform X2
translation: MDQPGLPAPAREENEVKYDTNNNEEEEEGEQLDLDSGDEAPEADRQAPGSAEAGDAGADAPATAATAATAGPCASSGHHPGTSQPTCGLDRPGEGCEKGPGVEPLKPGVPSRVNPYSVIDITPLQEDQPPPPDPDAEGEGGGLHVPSGYLVPVPCGYAVPSSLPLLLPAYTSPVLPAPPADPAETQEAAEDSQLNSLSSEDPANSEDPDQKEDSALARWVADPANTAWMENPEEAIYDDVPRENSDSEPDEMIYDDVENGDEGGHSSLEYGWSSSEFESYEEQSDSESRSGVPRSFLRGDHRKQLSHDLTRLKEHYERKMRELMANTVGAVEIQQLKHKHELKMQKLVRAAREGTKDGLEKTKAAVKRGRSFIRTKSFISADHRSCLEEEQNVFIDVDCKHPEAILTPMPEGLSQQQVVRRYILGSIVDSEKNYVDALKRILEQYEKPLWEMEPKVLSERKLRTVFFRVKEVLQCHCLLQIALAGRVAEWDSVEMIGDVFVASFSKSMVLDAYSEYVNNFSTAVAILKKTCATKPAFLEFLKCQESSPDRVTLHSLMTKPIQRFPQFILLLQDMLKNTPRGHPDRLPLQMALTELETLAEKLNERKRDADQRCEIKQIAKAINERYLNKLLSSGSRYLIRSDDVIETVYNDRGEIMKTKERRLFMLNDVLMCATVSTRAPSSRSASHDGGAVTSGQRYLLKWSVPLGQAEVVEYGGGDGAAEGGRCPTGPAPESLLAASTKPHRVYVGPGQLYQDLQNLLHDLSVIGHITQLVGNLKGNYQNLNPLVAQDWMSGLQRLILKKEEEIRAADCCRVQLQLPGKQDKSGRPTFFTAVFNTFTPAIKESWINSLQMAKLALEEENHLGWFCVEDDGNQIRKERHPLLLGHMPVTVAKQQEFKIECAVYNPEPYLNNENQSDSFSVAHGFLWIGSCTSQMGQIAIVSFHNSSPKVIECFNVESRVLCMVYVPAEDRPREPEGGGRVLGVPAVCLGTEEGSISIYKSSQGCKKVRLQHFFTPEKSTVMSLACTAQSLYAGLVNGAVAVYARADDGSWNSEPQTVIKLGVLPVRSLLLMEDTLWAASGGQVFIISVETLAVEGQLEAHQEEGMVVSHMAIAGVGIWVAFTSGSTLRLFHTETLKHLQDVNIATPVHHMLPGHQRLSVTSLLVCHGLLMVGTSLGVVVALPVPRLQGIPKVTGRGLVSHHAHHGPVKFLVVAAAALKADKDRPRDSPPPGADPQDDEQRDVPSSEGPGLCMGRGGPDAVWLGTSPGSITQGSDVSSSSGSPTPSQGSGSLEPRPEESLAQDLLRLPCTSPSRGRRARRPRASSVLVACGGQGHRRVSRKARPQRPEELASSLMVWQIPLLHV
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
location: join(1415127..1415163,1418832..1419077,1419649..1419915,1421473..1421536,1422976..1423052,1424805..1424861,1427126..1427289,1429551..1429667,1432161..1432275,1433188..1433294,1436126..1436203,1436417..1436596,1437263..1437379,1438218..1438307,1439005..1439175,1440874..1441019,1441203..1441396,1446196..1446311,1446675..1446802,1446961..1447061,1447233..1447354,1448004..1448090,1448736..1448938,1449494..1449651,1451697..1451839,1457586..1457760,1460867..1460989,1463161..1463672)
location: region:1415127-1463672:1
so has part: feature:1415127-1415163:1:exon
so has part: feature:1418832-1419077:1:exon
so has part: feature:1419649-1419915:1:exon
so has part: feature:1421473-1421536:1:exon
so has part: feature:1422976-1423052:1:exon
so has part: feature:1424805-1424861:1:exon
so has part: feature:1427126-1427289:1:exon
so has part: feature:1429551-1429667:1:exon
so has part: feature:1432161-1432275:1:exon
so has part: feature:1433188-1433294:1:exon
so has part: feature:1436126-1436203:1:exon
so has part: feature:1436417-1436596:1:exon
so has part: feature:1437263-1437379:1:exon
so has part: feature:1438218-1438307:1:exon
so has part: feature:1439005-1439175:1:exon
so has part: feature:1440874-1441019:1:exon
so has part: feature:1441203-1441396:1:exon
so has part: feature:1446196-1446311:1:exon
so has part: feature:1446675-1446802:1:exon
so has part: feature:1446961-1447061:1:exon
so has part: feature:1447233-1447354:1:exon
so has part: feature:1448004-1448090:1:exon
so has part: feature:1448736-1448938:1:exon
so has part: feature:1449494-1449651:1:exon
so has part: feature:1451697-1451839:1:exon
so has part: feature:1457586-1457760:1:exon
so has part: feature:1460867-1460989:1:exon
so has part: feature:1463161-1463672:1:exon

XP_027386020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1415127-1415163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1418832-1419077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419649-1419915:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1421473-1421536:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1422976-1423052:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1424805-1424861:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427126-1427289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1429551-1429667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1432161-1432275:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1433188-1433294:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1436126-1436203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1436417-1436596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1437263-1437379:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1438218-1438307:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1439005-1439175:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1440874-1441019:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1441203-1441396:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1446196-1446311:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1446675-1446802:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1446961-1447061:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1447233-1447354:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1448004-1448090:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1448736-1448938:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1449494-1449651:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1451697-1451839:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1457586-1457760:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1460867-1460989:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1463161-1463672:1:exon

ARHGEF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ARHGEF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 10 isoform X3
translation: MDQPGLPAPAREENEVKYDTNNNEEEEEGEQLDLDSGDEAPEADRQAPGSAEAGDAGADAPATAATAATAGPCASSGHHPGTSQPTCGLDRPGEGCEKGPGVEPLKPGVPSRVNPYSVIDITPLQEDQPPPPDPDAEGEGGGLHVPSGYLVPVPCGYAVPSSLPLLLPAYTSPVLPAPPADPAETQEAAEDSQLNSLSSEDPANSEDPDQKEDSALARWVADPANTAWMENPEEAIYDDVPRENSDSEPDEMIYDDVENGDEGGHSSLEYGWSSSEFESYEEQSDSESRSGVPRSFLRGDHRKQMQKLVRAAREGTKDGLEKTKAAVKRGRSFIRTKSFISADHRSCLEEEQNVFIDVDCKHPEAILTPMPEGLSQQQVVRRYILGSIVDSEKNYVDALKRILEQYEKPLWEMEPKVLSERKLRTVFFRVKEVLQCHCLLQIALAGRVAEWDSVEMIGDVFVASFSKSMVLDAYSEYVNNFSTAVAILKKTCATKPAFLEFLKQCQESSPDRVTLHSLMTKPIQRFPQFILLLQDMLKNTPRGHPDRLPLQMALTELETLAEKLNERKRDADQRCEIKQIAKAINERYLNKLLSSGSRYLIRSDDVIETVYNDRGEIMKTKERRLFMLNDVLMCATVSTRAPSSRSASHDGGAVTSGQRYLLKWSVPLGQAEVVEYGGGDGAAEGGRCPTGPAPESLLAASTKPHRVYVGPGQLYQDLQNLLHDLSVIGHITQLVGNLKGNYQNLNPLVAQDWMSGLQRLILKKEEEIRAADCCRVQLQLPGKQDKSGRPTFFTAVFNTFTPAIKESWINSLQMAKLALEEENHLGWFCVEDDGNQIRKERHPLLLGHMPVTVAKQQEFKIECAVYNPEPYLNNENQSDSFSVAHGFLWIGSCTSQMGQIAIVSFHNSSPKVIECFNVESRVLCMVYVPAEDRPREPEGGGRVLGVPAVCLGTEEGSISIYKSSQGCKKVRLQHFFTPEKSTVMSLACTAQSLYAGLVNGAVAVYARADDGSWNSEPQTVIKLGVLPVRSLLLMEDTLWAASGGQVFIISVETLAVEGQLEAHQEEGMVVSHMAIAGVGIWVAFTSGSTLRLFHTETLKHLQDVNIATPVHHMLPGHQRLSVTSLLVCHGLLMVGTSLGVVVALPVPRLQGIPKVTGRGLVSHHAHHGPVKFLVVAAAALKADKDRPRDSPPPGADPQDDEQRDVPSSEGPGLCMGRGGPDAVWLGTSPGSITQGSDVSSSSGSPTPSQGSGSLEPRPEESLAQDLLRLPCTSPSRGRRARRPRASSVLVACGGQGHRRVSRKARPQRPEELASSLMVWQIPLLHV
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
location: join(1415127..1415163,1418832..1419077,1419649..1419915,1421473..1421536,1422976..1423052,1424805..1424861,1427126..1427289,1432161..1432275,1433188..1433294,1436126..1436203,1436417..1436596,1437263..1437379,1438215..1438307,1439005..1439175,1440874..1441019,1441203..1441396,1446196..1446311,1446675..1446802,1446961..1447061,1447233..1447354,1448004..1448090,1448736..1448938,1449494..1449651,1451697..1451839,1457586..1457760,1460867..1460989,1463161..1463672)
location: region:1415127-1463672:1
so has part: feature:1415127-1415163:1:exon
so has part: feature:1418832-1419077:1:exon
so has part: feature:1419649-1419915:1:exon
so has part: feature:1421473-1421536:1:exon
so has part: feature:1422976-1423052:1:exon
so has part: feature:1424805-1424861:1:exon
so has part: feature:1427126-1427289:1:exon
so has part: feature:1432161-1432275:1:exon
so has part: feature:1433188-1433294:1:exon
so has part: feature:1436126-1436203:1:exon
so has part: feature:1436417-1436596:1:exon
so has part: feature:1437263-1437379:1:exon
so has part: feature:1438215-1438307:1:exon
so has part: feature:1439005-1439175:1:exon
so has part: feature:1440874-1441019:1:exon
so has part: feature:1441203-1441396:1:exon
so has part: feature:1446196-1446311:1:exon
so has part: feature:1446675-1446802:1:exon
so has part: feature:1446961-1447061:1:exon
so has part: feature:1447233-1447354:1:exon
so has part: feature:1448004-1448090:1:exon
so has part: feature:1448736-1448938:1:exon
so has part: feature:1449494-1449651:1:exon
so has part: feature:1451697-1451839:1:exon
so has part: feature:1457586-1457760:1:exon
so has part: feature:1460867-1460989:1:exon
so has part: feature:1463161-1463672:1:exon

XP_027386021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1415127-1415163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1418832-1419077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419649-1419915:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1421473-1421536:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1422976-1423052:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1424805-1424861:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427126-1427289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1432161-1432275:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1433188-1433294:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1436126-1436203:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1436417-1436596:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1437263-1437379:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1438215-1438307:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1439005-1439175:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1440874-1441019:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1441203-1441396:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1446196-1446311:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1446675-1446802:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1446961-1447061:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1447233-1447354:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1448004-1448090:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1448736-1448938:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1449494-1449651:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1451697-1451839:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1457586-1457760:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1460867-1460989:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1463161-1463672:1:exon

ARHGEF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ARHGEF10
product: Rho guanine nucleotide exchange factor 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 ESTs, 4 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_027530221.1
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
location: join(1424874..1426097,1427126..1427289,1429551..1429667,1432161..1432275,1433188..1433294,1436126..1436203,1436417..1436596,1437263..1437379,1438215..1438307,1439005..1439175,1440874..1441019,1441203..1441396,1446196..1446311,1446675..1446802,1446961..1447061,1447233..1447354,1448004..1448090,1448736..1448938,1449494..1449651,1451697..1451839,1457586..1457760,1460867..1460989,1463161..1464794)
location: region:1424874-1464794:1
so has part: feature:1424874-1426097:1:exon
so has part: feature:1427126-1427289:1:exon
so has part: feature:1429551-1429667:1:exon
so has part: feature:1432161-1432275:1:exon
so has part: feature:1433188-1433294:1:exon
so has part: feature:1436126-1436203:1:exon
so has part: feature:1436417-1436596:1:exon
so has part: feature:1437263-1437379:1:exon
so has part: feature:1438215-1438307:1:exon
so has part: feature:1439005-1439175:1:exon
so has part: feature:1440874-1441019:1:exon
so has part: feature:1441203-1441396:1:exon
so has part: feature:1446196-1446311:1:exon
so has part: feature:1446675-1446802:1:exon
so has part: feature:1446961-1447061:1:exon
so has part: feature:1447233-1447354:1:exon
so has part: feature:1448004-1448090:1:exon
so has part: feature:1448736-1448938:1:exon
so has part: feature:1449494-1449651:1:exon
so has part: feature:1451697-1451839:1:exon
so has part: feature:1457586-1457760:1:exon
so has part: feature:1460867-1460989:1:exon
so has part: feature:1463161-1464794:1:exon

position:1424874:1
position: 1424874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1424874-1426097:1:exon

position:1426097:1
position: 1426097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1427126-1427289:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1429551-1429667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1432161-1432275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1433188-1433294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1436126-1436203:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1436417-1436596:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1437263-1437379:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1438215-1438307:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1439005-1439175:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1440874-1441019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1441203-1441396:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1446196-1446311:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1446675-1446802:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1446961-1447061:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1447233-1447354:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1448004-1448090:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1448736-1448938:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1449494-1449651:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1451697-1451839:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1457586-1457760:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1460867-1460989:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1463161-1464794:1:exon

ARHGEF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ARHGEF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 10 isoform X4
translation: MIYDDVENGDEGGHSSLEYGWSSSEFESYEEQSDSESRSGVPRSFLRGDHRKQLSHDLTRLKEHYERKMRELMANTVGAVEIQQLKHKHELKMQKLVRAAREGTKDGLEKTKAAVKRGRSFIRTKSFISADHRSCLEEEQNVFIDVDCKHPEAILTPMPEGLSQQQVVRRYILGSIVDSEKNYVDALKRILEQYEKPLWEMEPKVLSERKLRTVFFRVKEVLQCHCLLQIALAGRVAEWDSVEMIGDVFVASFSKSMVLDAYSEYVNNFSTAVAILKKTCATKPAFLEFLKQCQESSPDRVTLHSLMTKPIQRFPQFILLLQDMLKNTPRGHPDRLPLQMALTELETLAEKLNERKRDADQRCEIKQIAKAINERYLNKLLSSGSRYLIRSDDVIETVYNDRGEIMKTKERRLFMLNDVLMCATVSTRAPSSRSASHDGGAVTSGQRYLLKWSVPLGQAEVVEYGGGDGAAEGGRCPTGPAPESLLAASTKPHRVYVGPGQLYQDLQNLLHDLSVIGHITQLVGNLKGNYQNLNPLVAQDWMSGLQRLILKKEEEIRAADCCRVQLQLPGKQDKSGRPTFFTAVFNTFTPAIKESWINSLQMAKLALEEENHLGWFCVEDDGNQIRKERHPLLLGHMPVTVAKQQEFKIECAVYNPEPYLNNENQSDSFSVAHGFLWIGSCTSQMGQIAIVSFHNSSPKVIECFNVESRVLCMVYVPAEDRPREPEGGGRVLGVPAVCLGTEEGSISIYKSSQGCKKVRLQHFFTPEKSTVMSLACTAQSLYAGLVNGAVAVYARADDGSWNSEPQTVIKLGVLPVRSLLLMEDTLWAASGGQVFIISVETLAVEGQLEAHQEEGMVVSHMAIAGVGIWVAFTSGSTLRLFHTETLKHLQDVNIATPVHHMLPGHQRLSVTSLLVCHGLLMVGTSLGVVVALPVPRLQGIPKVTGRGLVSHHAHHGPVKFLVVAAAALKADKDRPRDSPPPGADPQDDEQRDVPSSEGPGLCMGRGGPDAVWLGTSPGSITQGSDVSSSSGSPTPSQGSGSLEPRPEESLAQDLLRLPCTSPSRGRRARRPRASSVLVACGGQGHRRVSRKARPQRPEELASSLMVWQIPLLHV
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
location: join(1427131..1427289,1429551..1429667,1432161..1432275,1433188..1433294,1436126..1436203,1436417..1436596,1437263..1437379,1438215..1438307,1439005..1439175,1440874..1441019,1441203..1441396,1446196..1446311,1446675..1446802,1446961..1447061,1447233..1447354,1448004..1448090,1448736..1448938,1449494..1449651,1451697..1451839,1457586..1457760,1460867..1460989,1463161..1463672)
location: region:1427131-1463672:1
so has part: feature:1427131-1427289:1:exon
so has part: feature:1429551-1429667:1:exon
so has part: feature:1432161-1432275:1:exon
so has part: feature:1433188-1433294:1:exon
so has part: feature:1436126-1436203:1:exon
so has part: feature:1436417-1436596:1:exon
so has part: feature:1437263-1437379:1:exon
so has part: feature:1438215-1438307:1:exon
so has part: feature:1439005-1439175:1:exon
so has part: feature:1440874-1441019:1:exon
so has part: feature:1441203-1441396:1:exon
so has part: feature:1446196-1446311:1:exon
so has part: feature:1446675-1446802:1:exon
so has part: feature:1446961-1447061:1:exon
so has part: feature:1447233-1447354:1:exon
so has part: feature:1448004-1448090:1:exon
so has part: feature:1448736-1448938:1:exon
so has part: feature:1449494-1449651:1:exon
so has part: feature:1451697-1451839:1:exon
so has part: feature:1457586-1457760:1:exon
so has part: feature:1460867-1460989:1:exon
so has part: feature:1463161-1463672:1:exon

XP_027386022.1
type: Protein
SIO_000068: ncbiprotein

position:1427131:1
position: 1427131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427131-1427289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1429551-1429667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1432161-1432275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1433188-1433294:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1436126-1436203:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1436417-1436596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1437263-1437379:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1438215-1438307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1439005-1439175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1440874-1441019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1441203-1441396:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1446196-1446311:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1446675-1446802:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1446961-1447061:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1447233-1447354:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1448004-1448090:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1448736-1448938:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1449494-1449651:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1451697-1451839:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1457586-1457760:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1460867-1460989:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1463161-1463672:1:exon

LOC113885071
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1436289..1440867)
location: region:1436289-1440867:-1
so has part: feature:1436289-1440867:-1:exon
subclass of: SO_0000011

113885071
type: Gene
SIO_000068: ncbigene

position:1436289:-1
position: 1436289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1440867:-1
position: 1440867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436289-1440867:-1:exon

LOC113885071
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113885071
product: uncharacterized LOC113885071, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_003509126.1
SIO_010081: LOC113885071
subclass of: SO_0000673
so part of: LOC113885071
location: complement(join(1436289..1436678,1436777..1437089,1439167..1440867))
location: region:1436289-1440867:-1
so has part: feature:1439167-1440867:-1:exon
so has part: feature:1436777-1437089:-1:exon
so has part: feature:1436289-1436678:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1439167-1440867:-1:exon

position:1439167:-1
position: 1439167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1436777-1437089:-1:exon

position:1436777:-1
position: 1436777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437089:-1
position: 1437089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1436289-1436678:-1:exon

position:1436678:-1
position: 1436678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113885071
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113885071
product: uncharacterized LOC113885071, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_003509125.1
SIO_010081: LOC113885071
subclass of: SO_0000673
so part of: LOC113885071
location: complement(join(1436289..1437089,1439167..1440867))
location: region:1436289-1440867:-1
so has part: feature:1439167-1440867:-1:exon
so has part: feature:1436289-1437089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1439167-1440867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1436289-1437089:-1:exon

LOC113885071
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113885071
product: uncharacterized LOC113885071, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_003509127.1
SIO_010081: LOC113885071
subclass of: SO_0000673
so part of: LOC113885071
location: complement(join(1436289..1437089,1438609..1438730,1439167..1440867))
location: region:1436289-1440867:-1
so has part: feature:1439167-1440867:-1:exon
so has part: feature:1438609-1438730:-1:exon
so has part: feature:1436289-1437089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1439167-1440867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1438609-1438730:-1:exon

position:1438609:-1
position: 1438609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1438730:-1
position: 1438730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1436289-1437089:-1:exon

KBTBD11
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: KBTBD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1470004..1491266
location: region:1470004-1491266:1
so has part: feature:1470004-1491266:1:exon
subclass of: SO_0000010

113884814
type: Gene
SIO_000068: ncbigene

position:1470004:1
position: 1470004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1491266:1
position: 1491266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1470004-1491266:1:exon

KBTBD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: KBTBD11
product: kelch repeat and BTB domain containing 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 ESTs, 3 long SRA reads, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027529792.1
SIO_010081: KBTBD11
subclass of: SO_0000673
so part of: KBTBD11
location: join(1470004..1470129,1476896..1477095,1478360..1478818,1479304..1480629,1484317..1491266)
location: region:1470004-1491266:1
so has part: feature:1470004-1470129:1:exon
so has part: feature:1476896-1477095:1:exon
so has part: feature:1478360-1478818:1:exon
so has part: feature:1479304-1480629:1:exon
so has part: feature:1484317-1491266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1470004-1470129:1:exon

position:1470129:1
position: 1470129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1476896-1477095:1:exon

position:1476896:1
position: 1476896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1477095:1
position: 1477095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1478360-1478818:1:exon

position:1478360:1
position: 1478360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1478818:1
position: 1478818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1479304-1480629:1:exon

position:1479304:1
position: 1479304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480629:1
position: 1480629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1484317-1491266:1:exon

position:1484317:1
position: 1484317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KBTBD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: KBTBD11
product: kelch repeat and BTB domain containing 11, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 ESTs, 3 long SRA reads, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_027529797.1
SIO_010081: KBTBD11
subclass of: SO_0000673
so part of: KBTBD11
location: join(1470007..1470129,1480307..1480629,1484317..1491266)
location: region:1470007-1491266:1
so has part: feature:1470007-1470129:1:exon
so has part: feature:1480307-1480629:1:exon
so has part: feature:1484317-1491266:1:exon

position:1470007:1
position: 1470007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1470007-1470129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1480307-1480629:1:exon

position:1480307:1
position: 1480307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1484317-1491266:1:exon

KBTBD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: KBTBD11
product: kelch repeat and BTB domain containing 11, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 ESTs, 3 long SRA reads, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_027529794.1
SIO_010081: KBTBD11
subclass of: SO_0000673
so part of: KBTBD11
location: join(1470008..1470129,1476896..1477095,1484317..1491266)
location: region:1470008-1491266:1
so has part: feature:1470008-1470129:1:exon
so has part: feature:1476896-1477095:1:exon
so has part: feature:1484317-1491266:1:exon

position:1470008:1
position: 1470008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1470008-1470129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1476896-1477095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1484317-1491266:1:exon

KBTBD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: KBTBD11
product: kelch repeat and BTB domain containing 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 ESTs, 3 long SRA reads, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 140 samples with support for all annotated introns
transcript id: XM_027529791.1
SIO_010081: KBTBD11
subclass of: SO_0000673
so part of: KBTBD11
location: join(1470009..1470129,1484317..1491266)
location: region:1470009-1491266:1
so has part: feature:1470009-1470129:1:exon
so has part: feature:1484317-1491266:1:exon

position:1470009:1
position: 1470009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1470009-1470129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1484317-1491266:1:exon

KBTBD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: KBTBD11
product: kelch repeat and BTB domain containing 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 ESTs, 3 long SRA reads, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_027529793.1
SIO_010081: KBTBD11
subclass of: SO_0000673
so part of: KBTBD11
location: join(1470142..1470303,1484317..1491266)
location: region:1470142-1491266:1
so has part: feature:1470142-1470303:1:exon
so has part: feature:1484317-1491266:1:exon

position:1470142:1
position: 1470142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1470142-1470303:1:exon

position:1470303:1
position: 1470303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1484317-1491266:1:exon

KBTBD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: KBTBD11
product: kelch repeat and BTB domain containing 11, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 ESTs, 3 long SRA reads, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_027529795.1
SIO_010081: KBTBD11
subclass of: SO_0000673
so part of: KBTBD11
location: join(1470314..1470407,1484317..1491266)
location: region:1470314-1491266:1
so has part: feature:1470314-1470407:1:exon
so has part: feature:1484317-1491266:1:exon

position:1470314:1
position: 1470314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1470314-1470407:1:exon

position:1470407:1
position: 1470407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1484317-1491266:1:exon

KBTBD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: KBTBD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch repeat and BTB domain-containing protein 11
translation: MENPVVPCVLYPGDGACGQAGGRGGAPEAPGEGSLQPPDAAEGEGAASPAQTPCSLSASLCFSSGDDSPPQSRASSAAEDAAASPPSCCSGRRVVERQWGVGSSGAASPEDSASPEEPAFPGERPPTEEPTSPEEHADPAPVPPGVGPEHGEPDLLIEVSGRRLRAHKAVLAARSDYFRARASRDVLRVQGVGWAALRLLLAYAYSGRMAGVRPDNVADVVAGARRLQLPCAAQRATDAVAPQLSLANCFEVLSAAKRQRLAELREAAYRFMSDHYLEVLREPAVFGRLSGAERDLLLRRRLRAGRTRLLAAALGPAGERAGSRPQSPSGDAEGRGEAAVYCFHEAAGEWRELTRLPEGAPARGCGLCVLYNYLFVAGGVGPAGPDGRARPSDRVFCYNPATDRWSTVRPLRQARSQLQLLALDGHLYAVGGECLLSVERYDPRADRWAAVAPLPRGAFAVAHEATTCNGEIYVSGGSLFYRLLKYDPRRDEWQECPCSSSRERSADMVALDGFIYRFDLCGARGDAPAAVPAGGVSVLRYHCLAKQWSRCASHLRPPGAPSGLQPFRCAALEGTIYCVSRAGTWRFVPPGEGEPGAGDAGLEGSFELQSLQTPADARGLLFPFVLNLPEEKPDRGEEGAV
SIO_010081: KBTBD11
subclass of: SO_0000673
so part of: KBTBD11
location: 1485062..1486987
location: region:1485062-1486987:1
so has part: feature:1485062-1486987:1:exon

XP_027385592.1
type: Protein
SIO_000068: ncbiprotein

position:1485062:1
position: 1485062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486987:1
position: 1486987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1485062-1486987:1:exon

KBTBD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: KBTBD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch repeat and BTB domain-containing protein 11
translation: MENPVVPCVLYPGDGACGQAGGRGGAPEAPGEGSLQPPDAAEGEGAASPAQTPCSLSASLCFSSGDDSPPQSRASSAAEDAAASPPSCCSGRRVVERQWGVGSSGAASPEDSASPEEPAFPGERPPTEEPTSPEEHADPAPVPPGVGPEHGEPDLLIEVSGRRLRAHKAVLAARSDYFRARASRDVLRVQGVGWAALRLLLAYAYSGRMAGVRPDNVADVVAGARRLQLPCAAQRATDAVAPQLSLANCFEVLSAAKRQRLAELREAAYRFMSDHYLEVLREPAVFGRLSGAERDLLLRRRLRAGRTRLLAAALGPAGERAGSRPQSPSGDAEGRGEAAVYCFHEAAGEWRELTRLPEGAPARGCGLCVLYNYLFVAGGVGPAGPDGRARPSDRVFCYNPATDRWSTVRPLRQARSQLQLLALDGHLYAVGGECLLSVERYDPRADRWAAVAPLPRGAFAVAHEATTCNGEIYVSGGSLFYRLLKYDPRRDEWQECPCSSSRERSADMVALDGFIYRFDLCGARGDAPAAVPAGGVSVLRYHCLAKQWSRCASHLRPPGAPSGLQPFRCAALEGTIYCVSRAGTWRFVPPGEGEPGAGDAGLEGSFELQSLQTPADARGLLFPFVLNLPEEKPDRGEEGAV
SIO_010081: KBTBD11
subclass of: SO_0000673
so part of: KBTBD11
location: 1485062..1486987
location: region:1485062-1486987:1
so has part: feature:1485062-1486987:1:exon

XP_027385593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1485062-1486987:1:exon

KBTBD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: KBTBD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch repeat and BTB domain-containing protein 11
translation: MENPVVPCVLYPGDGACGQAGGRGGAPEAPGEGSLQPPDAAEGEGAASPAQTPCSLSASLCFSSGDDSPPQSRASSAAEDAAASPPSCCSGRRVVERQWGVGSSGAASPEDSASPEEPAFPGERPPTEEPTSPEEHADPAPVPPGVGPEHGEPDLLIEVSGRRLRAHKAVLAARSDYFRARASRDVLRVQGVGWAALRLLLAYAYSGRMAGVRPDNVADVVAGARRLQLPCAAQRATDAVAPQLSLANCFEVLSAAKRQRLAELREAAYRFMSDHYLEVLREPAVFGRLSGAERDLLLRRRLRAGRTRLLAAALGPAGERAGSRPQSPSGDAEGRGEAAVYCFHEAAGEWRELTRLPEGAPARGCGLCVLYNYLFVAGGVGPAGPDGRARPSDRVFCYNPATDRWSTVRPLRQARSQLQLLALDGHLYAVGGECLLSVERYDPRADRWAAVAPLPRGAFAVAHEATTCNGEIYVSGGSLFYRLLKYDPRRDEWQECPCSSSRERSADMVALDGFIYRFDLCGARGDAPAAVPAGGVSVLRYHCLAKQWSRCASHLRPPGAPSGLQPFRCAALEGTIYCVSRAGTWRFVPPGEGEPGAGDAGLEGSFELQSLQTPADARGLLFPFVLNLPEEKPDRGEEGAV
SIO_010081: KBTBD11
subclass of: SO_0000673
so part of: KBTBD11
location: 1485062..1486987
location: region:1485062-1486987:1
so has part: feature:1485062-1486987:1:exon

XP_027385594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1485062-1486987:1:exon

KBTBD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: KBTBD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch repeat and BTB domain-containing protein 11
translation: MENPVVPCVLYPGDGACGQAGGRGGAPEAPGEGSLQPPDAAEGEGAASPAQTPCSLSASLCFSSGDDSPPQSRASSAAEDAAASPPSCCSGRRVVERQWGVGSSGAASPEDSASPEEPAFPGERPPTEEPTSPEEHADPAPVPPGVGPEHGEPDLLIEVSGRRLRAHKAVLAARSDYFRARASRDVLRVQGVGWAALRLLLAYAYSGRMAGVRPDNVADVVAGARRLQLPCAAQRATDAVAPQLSLANCFEVLSAAKRQRLAELREAAYRFMSDHYLEVLREPAVFGRLSGAERDLLLRRRLRAGRTRLLAAALGPAGERAGSRPQSPSGDAEGRGEAAVYCFHEAAGEWRELTRLPEGAPARGCGLCVLYNYLFVAGGVGPAGPDGRARPSDRVFCYNPATDRWSTVRPLRQARSQLQLLALDGHLYAVGGECLLSVERYDPRADRWAAVAPLPRGAFAVAHEATTCNGEIYVSGGSLFYRLLKYDPRRDEWQECPCSSSRERSADMVALDGFIYRFDLCGARGDAPAAVPAGGVSVLRYHCLAKQWSRCASHLRPPGAPSGLQPFRCAALEGTIYCVSRAGTWRFVPPGEGEPGAGDAGLEGSFELQSLQTPADARGLLFPFVLNLPEEKPDRGEEGAV
SIO_010081: KBTBD11
subclass of: SO_0000673
so part of: KBTBD11
location: 1485062..1486987
location: region:1485062-1486987:1
so has part: feature:1485062-1486987:1:exon

XP_027385595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1485062-1486987:1:exon

KBTBD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: KBTBD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch repeat and BTB domain-containing protein 11
translation: MENPVVPCVLYPGDGACGQAGGRGGAPEAPGEGSLQPPDAAEGEGAASPAQTPCSLSASLCFSSGDDSPPQSRASSAAEDAAASPPSCCSGRRVVERQWGVGSSGAASPEDSASPEEPAFPGERPPTEEPTSPEEHADPAPVPPGVGPEHGEPDLLIEVSGRRLRAHKAVLAARSDYFRARASRDVLRVQGVGWAALRLLLAYAYSGRMAGVRPDNVADVVAGARRLQLPCAAQRATDAVAPQLSLANCFEVLSAAKRQRLAELREAAYRFMSDHYLEVLREPAVFGRLSGAERDLLLRRRLRAGRTRLLAAALGPAGERAGSRPQSPSGDAEGRGEAAVYCFHEAAGEWRELTRLPEGAPARGCGLCVLYNYLFVAGGVGPAGPDGRARPSDRVFCYNPATDRWSTVRPLRQARSQLQLLALDGHLYAVGGECLLSVERYDPRADRWAAVAPLPRGAFAVAHEATTCNGEIYVSGGSLFYRLLKYDPRRDEWQECPCSSSRERSADMVALDGFIYRFDLCGARGDAPAAVPAGGVSVLRYHCLAKQWSRCASHLRPPGAPSGLQPFRCAALEGTIYCVSRAGTWRFVPPGEGEPGAGDAGLEGSFELQSLQTPADARGLLFPFVLNLPEEKPDRGEEGAV
SIO_010081: KBTBD11
subclass of: SO_0000673
so part of: KBTBD11
location: 1485062..1486987
location: region:1485062-1486987:1
so has part: feature:1485062-1486987:1:exon

XP_027385596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1485062-1486987:1:exon

KBTBD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: KBTBD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch repeat and BTB domain-containing protein 11
translation: MENPVVPCVLYPGDGACGQAGGRGGAPEAPGEGSLQPPDAAEGEGAASPAQTPCSLSASLCFSSGDDSPPQSRASSAAEDAAASPPSCCSGRRVVERQWGVGSSGAASPEDSASPEEPAFPGERPPTEEPTSPEEHADPAPVPPGVGPEHGEPDLLIEVSGRRLRAHKAVLAARSDYFRARASRDVLRVQGVGWAALRLLLAYAYSGRMAGVRPDNVADVVAGARRLQLPCAAQRATDAVAPQLSLANCFEVLSAAKRQRLAELREAAYRFMSDHYLEVLREPAVFGRLSGAERDLLLRRRLRAGRTRLLAAALGPAGERAGSRPQSPSGDAEGRGEAAVYCFHEAAGEWRELTRLPEGAPARGCGLCVLYNYLFVAGGVGPAGPDGRARPSDRVFCYNPATDRWSTVRPLRQARSQLQLLALDGHLYAVGGECLLSVERYDPRADRWAAVAPLPRGAFAVAHEATTCNGEIYVSGGSLFYRLLKYDPRRDEWQECPCSSSRERSADMVALDGFIYRFDLCGARGDAPAAVPAGGVSVLRYHCLAKQWSRCASHLRPPGAPSGLQPFRCAALEGTIYCVSRAGTWRFVPPGEGEPGAGDAGLEGSFELQSLQTPADARGLLFPFVLNLPEEKPDRGEEGAV
SIO_010081: KBTBD11
subclass of: SO_0000673
so part of: KBTBD11
location: 1485062..1486987
location: region:1485062-1486987:1
so has part: feature:1485062-1486987:1:exon

XP_027385598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1485062-1486987:1:exon

MYOM2
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: MYOM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1507958..1572256
location: region:1507958-1572256:1
so has part: feature:1507958-1572256:1:exon
subclass of: SO_0000010

113884877
type: Gene
SIO_000068: ncbigene

position:1507958:1
position: 1507958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1572256:1
position: 1572256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1507958-1572256:1:exon

MYOM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: MYOM2
product: myomesin 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 ESTs, 1 long SRA read, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_027529939.1
SIO_010081: MYOM2
subclass of: SO_0000673
so part of: MYOM2
location: join(1507958..1508200,1514113..1514233,1515198..1515416,1518338..1518500,1518594..1518751,1520011..1520103,1525748..1525836,1525923..1525973,1526663..1526827,1529077..1529237,1532215..1532356,1535947..1536146,1536735..1536788,1541699..1541826,1544963..1545146,1545867..1546041,1546398..1546519,1548143..1548330,1549444..1549570,1550673..1550851,1551618..1551732,1552741..1552897,1552986..1553092,1555629..1555673,1556183..1556319,1560318..1560462,1560580..1560639,1561919..1561986,1562393..1562506,1562802..1562889,1563400..1563438,1565656..1565761,1568485..1568648,1568890..1568926,1570103..1570125,1571209..1571264,1571626..1572256)
location: region:1507958-1572256:1
so has part: feature:1507958-1508200:1:exon
so has part: feature:1514113-1514233:1:exon
so has part: feature:1515198-1515416:1:exon
so has part: feature:1518338-1518500:1:exon
so has part: feature:1518594-1518751:1:exon
so has part: feature:1520011-1520103:1:exon
so has part: feature:1525748-1525836:1:exon
so has part: feature:1525923-1525973:1:exon
so has part: feature:1526663-1526827:1:exon
so has part: feature:1529077-1529237:1:exon
so has part: feature:1532215-1532356:1:exon
so has part: feature:1535947-1536146:1:exon
so has part: feature:1536735-1536788:1:exon
so has part: feature:1541699-1541826:1:exon
so has part: feature:1544963-1545146:1:exon
so has part: feature:1545867-1546041:1:exon
so has part: feature:1546398-1546519:1:exon
so has part: feature:1548143-1548330:1:exon
so has part: feature:1549444-1549570:1:exon
so has part: feature:1550673-1550851:1:exon
so has part: feature:1551618-1551732:1:exon
so has part: feature:1552741-1552897:1:exon
so has part: feature:1552986-1553092:1:exon
so has part: feature:1555629-1555673:1:exon
so has part: feature:1556183-1556319:1:exon
so has part: feature:1560318-1560462:1:exon
so has part: feature:1560580-1560639:1:exon
so has part: feature:1561919-1561986:1:exon
so has part: feature:1562393-1562506:1:exon
so has part: feature:1562802-1562889:1:exon
so has part: feature:1563400-1563438:1:exon
so has part: feature:1565656-1565761:1:exon
so has part: feature:1568485-1568648:1:exon
so has part: feature:1568890-1568926:1:exon
so has part: feature:1570103-1570125:1:exon
so has part: feature:1571209-1571264:1:exon
so has part: feature:1571626-1572256:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1507958-1508200:1:exon

position:1508200:1
position: 1508200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1514113-1514233:1:exon

position:1514113:1
position: 1514113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514233:1
position: 1514233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1515198-1515416:1:exon

position:1515198:1
position: 1515198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515416:1
position: 1515416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1518338-1518500:1:exon

position:1518338:1
position: 1518338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518500:1
position: 1518500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1518594-1518751:1:exon

position:1518594:1
position: 1518594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518751:1
position: 1518751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1520011-1520103:1:exon

position:1520011:1
position: 1520011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1520103:1
position: 1520103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1525748-1525836:1:exon

position:1525748:1
position: 1525748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1525836:1
position: 1525836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1525923-1525973:1:exon

position:1525923:1
position: 1525923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1525973:1
position: 1525973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1526663-1526827:1:exon

position:1526663:1
position: 1526663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1526827:1
position: 1526827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1529077-1529237:1:exon

position:1529077:1
position: 1529077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529237:1
position: 1529237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1532215-1532356:1:exon

position:1532215:1
position: 1532215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1532356:1
position: 1532356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1535947-1536146:1:exon

position:1535947:1
position: 1535947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1536146:1
position: 1536146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1536735-1536788:1:exon

position:1536735:1
position: 1536735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1536788:1
position: 1536788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1541699-1541826:1:exon

position:1541699:1
position: 1541699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1541826:1
position: 1541826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1544963-1545146:1:exon

position:1544963:1
position: 1544963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1545146:1
position: 1545146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1545867-1546041:1:exon

position:1545867:1
position: 1545867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1546041:1
position: 1546041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1546398-1546519:1:exon

position:1546398:1
position: 1546398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1546519:1
position: 1546519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1548143-1548330:1:exon

position:1548143:1
position: 1548143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1548330:1
position: 1548330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1549444-1549570:1:exon

position:1549444:1
position: 1549444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1549570:1
position: 1549570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1550673-1550851:1:exon

position:1550673:1
position: 1550673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1550851:1
position: 1550851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1551618-1551732:1:exon

position:1551618:1
position: 1551618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1551732:1
position: 1551732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1552741-1552897:1:exon

position:1552741:1
position: 1552741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1552897:1
position: 1552897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1552986-1553092:1:exon

position:1552986:1
position: 1552986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1553092:1
position: 1553092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1555629-1555673:1:exon

position:1555629:1
position: 1555629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1555673:1
position: 1555673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1556183-1556319:1:exon

position:1556183:1
position: 1556183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1556319:1
position: 1556319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1560318-1560462:1:exon

position:1560318:1
position: 1560318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1560462:1
position: 1560462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1560580-1560639:1:exon

position:1560580:1
position: 1560580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1560639:1
position: 1560639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1561919-1561986:1:exon

position:1561919:1
position: 1561919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561986:1
position: 1561986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1562393-1562506:1:exon

position:1562393:1
position: 1562393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1562506:1
position: 1562506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1562802-1562889:1:exon

position:1562802:1
position: 1562802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1562889:1
position: 1562889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1563400-1563438:1:exon

position:1563400:1
position: 1563400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1563438:1
position: 1563438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1565656-1565761:1:exon

position:1565656:1
position: 1565656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1565761:1
position: 1565761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1568485-1568648:1:exon

position:1568485:1
position: 1568485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1568648:1
position: 1568648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1568890-1568926:1:exon

position:1568890:1
position: 1568890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1568926:1
position: 1568926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1570103-1570125:1:exon

position:1570103:1
position: 1570103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1570125:1
position: 1570125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1571209-1571264:1:exon

position:1571209:1
position: 1571209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571264:1
position: 1571264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1571626-1572256:1:exon

position:1571626:1
position: 1571626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYOM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: MYOM2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: myomesin-2
translation: MNQGDFSSEVLEIGVAKMSLVAVPFYQKRHKHFDQSYRNIQTRYLLDEYSAKKKRASAQSSLQRSVTRKSSSQRESSRAALGESTLGETTLGETSLGDTTLGRTTCRLCAKRMSSALEEEAQERKRRYQSMVAAYGEAKRERYLSELAQLEEDVHVARTHARDQLDRLALQHAGRHGLHHAVDDRLAWERHSFEERISRAPEILVRLRSHTVWERMSVKLCFTVQGFPTPVVQWYKDGSLICQAGEPGKYRIDSKYGVHTLEINRADFDDTATYSAVATNVHGQVSTNAAVVVRRFRGDEEPFHSVGLPIGLPLSSVIPYTHFDVQFIEKFGVTFRREGETLTLKCTLLVTPDLKRVQPRAEWYRDDVLLKESKWTKMFFGEGQASLSFSHLNKDDEGLYTLRIVSRGGXTDHSAFLFVRDADPLVTGAPGAPMDVHCHDANRDYVIVTWKPPNTTKESPVIGYFIDRCEVGTDNWIQCNDAPVKICKYPVTGLFEGRSYIFRVRAVNSAGISRPSRVSEAVAALDPVDLRRLQAVHLEGEKDIVIYQEELEGEVQIPGPPTNVHASETSRTYVVLSWDPPEPRGKEPLMYFIEKSMVGSGSWQRVNAQTAVRSPRYAVFDLAEGKPYVFRVLSANKHGLSDPSEITAPIQAQDTIVVPSAPGRVLASRNTRTSVVVQWDRPKHEEDLLGYYVDCSVAGSNVWEPCNHKPIGYNRFVVHGLTTGEQYIFRVKAVNAVGTSENSQESDVIKVQAALTVPSHPYGITLLNCDGHSMILGWKVPKFSGGSPILGYYVDKREAHHKNWHEVNSSPLKERILTVEGLTEGSLYEFKIAAANMAGIGQPSDPSELFKCEAWTMPEPGPAYDLTFCEVRDTSLVLLWKPPVYSGSSPVSGYFVDYKEEDSGEWLTVHETATPHRYLKVCDLHQGKTYVFRVRAVNASGVGRPSDTSEPVLVEARPGTKEVSAGVDEEGNVYLSFDCPEVTDASHFTWCKSYEDIADDDRFKVETAGDHSKLYFKNLDKEDLGTYSVSVSDTDGVSSSFVLDEEELERLKALSNEIKNPTIPLKSELAYEIFDKGQVRFWLQAEHLSPDSSYRFIINDREVADSETHRIKCDKSTGIIEMVMDRFTIDNEGTYTVQIQDGKAKSQSSLVLIGDAFKAVLKEAEFQRKEFLRKQGPHFAEYLHWDVTEECEVRLVCKVANTKKETVFKWLKDDVLYETEKMPDLEKGVCELLIPKLSKKDHGEYKATLKDDRGQDVSTLEIAGKVYEDMILAMSRVCGASASPLKILCTPEGIRLQCFMKYFTEEMKVNWYHKDAKITSSEHMRIGGSEQMAWLQICEPTEKDKGKYTFEILDGKKNHQRSLDLSGQAFDEAFAEFQQLKAAAFAEKNRGKVIGGLPDVVTIMEGKTLNLTCTVFGNPDPEVVWFKNDKDIELSDHFSVKVEQGKYVSMTIKGVTSEDSGKYSIHVKNKYGGEKIDVTVSVYKHGEEIPDVVLPQQAKPKLLPAAAPSPAH
SIO_010081: MYOM2
subclass of: SO_0000673
so part of: MYOM2
location: join(1508161..1508200,1514113..1514233,1515198..1515416,1518338..1518500,1518594..1518751,1520011..1520103,1525748..1525836,1525923..1525973,1526663..1526827,1529077..1529237,1532215..1532356,1535947..1536146,1536735..1536788,1541699..1541826,1544963..1545146,1545867..1546041,1546398..1546519,1548143..1548330,1549444..1549570,1550673..1550851,1551618..1551732,1552741..1552897,1552986..1553092,1555629..1555673,1556183..1556319,1560318..1560462,1560580..1560639,1561919..1561986,1562393..1562506,1562802..1562889,1563400..1563438,1565656..1565761,1568485..1568648,1568890..1568926,1570103..1570125,1571209..1571264,1571626..1571943)
location: region:1508161-1571943:1
so has part: feature:1508161-1508200:1:exon
so has part: feature:1514113-1514233:1:exon
so has part: feature:1515198-1515416:1:exon
so has part: feature:1518338-1518500:1:exon
so has part: feature:1518594-1518751:1:exon
so has part: feature:1520011-1520103:1:exon
so has part: feature:1525748-1525836:1:exon
so has part: feature:1525923-1525973:1:exon
so has part: feature:1526663-1526827:1:exon
so has part: feature:1529077-1529237:1:exon
so has part: feature:1532215-1532356:1:exon
so has part: feature:1535947-1536146:1:exon
so has part: feature:1536735-1536788:1:exon
so has part: feature:1541699-1541826:1:exon
so has part: feature:1544963-1545146:1:exon
so has part: feature:1545867-1546041:1:exon
so has part: feature:1546398-1546519:1:exon
so has part: feature:1548143-1548330:1:exon
so has part: feature:1549444-1549570:1:exon
so has part: feature:1550673-1550851:1:exon
so has part: feature:1551618-1551732:1:exon
so has part: feature:1552741-1552897:1:exon
so has part: feature:1552986-1553092:1:exon
so has part: feature:1555629-1555673:1:exon
so has part: feature:1556183-1556319:1:exon
so has part: feature:1560318-1560462:1:exon
so has part: feature:1560580-1560639:1:exon
so has part: feature:1561919-1561986:1:exon
so has part: feature:1562393-1562506:1:exon
so has part: feature:1562802-1562889:1:exon
so has part: feature:1563400-1563438:1:exon
so has part: feature:1565656-1565761:1:exon
so has part: feature:1568485-1568648:1:exon
so has part: feature:1568890-1568926:1:exon
so has part: feature:1570103-1570125:1:exon
so has part: feature:1571209-1571264:1:exon
so has part: feature:1571626-1571943:1:exon

XP_027385740.1
type: Protein
SIO_000068: ncbiprotein

position:1508161:1
position: 1508161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571943:1
position: 1571943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1508161-1508200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1514113-1514233:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1515198-1515416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1518338-1518500:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1518594-1518751:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1520011-1520103:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1525748-1525836:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1525923-1525973:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1526663-1526827:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1529077-1529237:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1532215-1532356:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1535947-1536146:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1536735-1536788:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1541699-1541826:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1544963-1545146:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1545867-1546041:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1546398-1546519:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1548143-1548330:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1549444-1549570:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1550673-1550851:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1551618-1551732:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1552741-1552897:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1552986-1553092:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1555629-1555673:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1556183-1556319:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1560318-1560462:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1560580-1560639:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1561919-1561986:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1562393-1562506:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1562802-1562889:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1563400-1563438:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1565656-1565761:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1568485-1568648:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1568890-1568926:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1570103-1570125:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1571209-1571264:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1571626-1571943:1:exon

CSMD1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: CSMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2205014..4281285)
location: region:2205014-4281285:-1
so has part: feature:2205014-4281285:-1:exon
subclass of: SO_0000010

113885092
type: Gene
SIO_000068: ncbigene

position:2205014:-1
position: 2205014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4281285:-1
position: 4281285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2205014-4281285:-1:exon

CSMD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CSMD1
product: CUB and Sushi multiple domains 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_027530260.1
SIO_010081: CSMD1
subclass of: SO_0000673
so part of: CSMD1
location: complement(join(2205014..2208197,2208299..2208431,2217816..2217903,2218648..2218760,2221611..2221769,2230232..2230411,2232872..2232983,2234970..2235043,2236544..2236717,2237176..2237349,2239682..2239861,2240493..2240669,2245390..2245572,2248023..2248196,2255449..2255637,2266376..2266549,2267931..2268104,2278653..2278826,2285735..2285929,2303646..2303831,2331501..2331689,2338776..2338922,2343616..2343804,2356036..2356149,2357215..2357295,2358063..2358208,2360113..2360290,2365995..2366183,2384158..2384367,2393575..2393691,2397267..2397336,2401024..2401142,2422967..2423071,2433295..2433391,2434269..2434393,2435244..2435447,2442884..2442979,2443294..2443407,2445442..2445558,2449236..2449430,2458406..2458593,2462363..2462501,2468277..2468468,2502287..2502489,2521702..2521828,2522618..2522809,2557329..2557485,2564442..2564611,2573168..2573356,2578092..2578307,2579738..2579854,2593265..2593453,2609891..2610078,2613444..2613582,2616700..2616894,2618709..2619035,2620848..2621030,2677827..2677939,2696564..2696667,2770229..2770350,2783177..2783301,2823189..2823276,2916372..2916449,2984851..2984963,3256609..3256816,3282968..3283162,3652748..3652860,3887330..3887546,4280305..4281285))
location: region:2205014-4281285:-1
so has part: feature:4280305-4281285:-1:exon
so has part: feature:3887330-3887546:-1:exon
so has part: feature:3652748-3652860:-1:exon
so has part: feature:3282968-3283162:-1:exon
so has part: feature:3256609-3256816:-1:exon
so has part: feature:2984851-2984963:-1:exon
so has part: feature:2916372-2916449:-1:exon
so has part: feature:2823189-2823276:-1:exon
so has part: feature:2783177-2783301:-1:exon
so has part: feature:2770229-2770350:-1:exon
so has part: feature:2696564-2696667:-1:exon
so has part: feature:2677827-2677939:-1:exon
so has part: feature:2620848-2621030:-1:exon
so has part: feature:2618709-2619035:-1:exon
so has part: feature:2616700-2616894:-1:exon
so has part: feature:2613444-2613582:-1:exon
so has part: feature:2609891-2610078:-1:exon
so has part: feature:2593265-2593453:-1:exon
so has part: feature:2579738-2579854:-1:exon
so has part: feature:2578092-2578307:-1:exon
so has part: feature:2573168-2573356:-1:exon
so has part: feature:2564442-2564611:-1:exon
so has part: feature:2557329-2557485:-1:exon
so has part: feature:2522618-2522809:-1:exon
so has part: feature:2521702-2521828:-1:exon
so has part: feature:2502287-2502489:-1:exon
so has part: feature:2468277-2468468:-1:exon
so has part: feature:2462363-2462501:-1:exon
so has part: feature:2458406-2458593:-1:exon
so has part: feature:2449236-2449430:-1:exon
so has part: feature:2445442-2445558:-1:exon
so has part: feature:2443294-2443407:-1:exon
so has part: feature:2442884-2442979:-1:exon
so has part: feature:2435244-2435447:-1:exon
so has part: feature:2434269-2434393:-1:exon
so has part: feature:2433295-2433391:-1:exon
so has part: feature:2422967-2423071:-1:exon
so has part: feature:2401024-2401142:-1:exon
so has part: feature:2397267-2397336:-1:exon
so has part: feature:2393575-2393691:-1:exon
so has part: feature:2384158-2384367:-1:exon
so has part: feature:2365995-2366183:-1:exon
so has part: feature:2360113-2360290:-1:exon
so has part: feature:2358063-2358208:-1:exon
so has part: feature:2357215-2357295:-1:exon
so has part: feature:2356036-2356149:-1:exon
so has part: feature:2343616-2343804:-1:exon
so has part: feature:2338776-2338922:-1:exon
so has part: feature:2331501-2331689:-1:exon
so has part: feature:2303646-2303831:-1:exon
so has part: feature:2285735-2285929:-1:exon
so has part: feature:2278653-2278826:-1:exon
so has part: feature:2267931-2268104:-1:exon
so has part: feature:2266376-2266549:-1:exon
so has part: feature:2255449-2255637:-1:exon
so has part: feature:2248023-2248196:-1:exon
so has part: feature:2245390-2245572:-1:exon
so has part: feature:2240493-2240669:-1:exon
so has part: feature:2239682-2239861:-1:exon
so has part: feature:2237176-2237349:-1:exon
so has part: feature:2236544-2236717:-1:exon
so has part: feature:2234970-2235043:-1:exon
so has part: feature:2232872-2232983:-1:exon
so has part: feature:2230232-2230411:-1:exon
so has part: feature:2221611-2221769:-1:exon
so has part: feature:2218648-2218760:-1:exon
so has part: feature:2217816-2217903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4280305-4281285:-1:exon

position:4280305:-1
position: 4280305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3887330-3887546:-1:exon

position:3887330:-1
position: 3887330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3887546:-1
position: 3887546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3652748-3652860:-1:exon

position:3652748:-1
position: 3652748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3652860:-1
position: 3652860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3282968-3283162:-1:exon

position:3282968:-1
position: 3282968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3283162:-1
position: 3283162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3256609-3256816:-1:exon

position:3256609:-1
position: 3256609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3256816:-1
position: 3256816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2984851-2984963:-1:exon

position:2984851:-1
position: 2984851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2984963:-1
position: 2984963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2916372-2916449:-1:exon

position:2916372:-1
position: 2916372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2916449:-1
position: 2916449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2823189-2823276:-1:exon

position:2823189:-1
position: 2823189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2823276:-1
position: 2823276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2783177-2783301:-1:exon

position:2783177:-1
position: 2783177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2783301:-1
position: 2783301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2770229-2770350:-1:exon

position:2770229:-1
position: 2770229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2770350:-1
position: 2770350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2696564-2696667:-1:exon

position:2696564:-1
position: 2696564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2696667:-1
position: 2696667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2677827-2677939:-1:exon

position:2677827:-1
position: 2677827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2677939:-1
position: 2677939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2620848-2621030:-1:exon

position:2620848:-1
position: 2620848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2621030:-1
position: 2621030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2618709-2619035:-1:exon

position:2618709:-1
position: 2618709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2619035:-1
position: 2619035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2616700-2616894:-1:exon

position:2616700:-1
position: 2616700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2616894:-1
position: 2616894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2613444-2613582:-1:exon

position:2613444:-1
position: 2613444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2613582:-1
position: 2613582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2609891-2610078:-1:exon

position:2609891:-1
position: 2609891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2610078:-1
position: 2610078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2593265-2593453:-1:exon

position:2593265:-1
position: 2593265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2593453:-1
position: 2593453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2579738-2579854:-1:exon

position:2579738:-1
position: 2579738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2579854:-1
position: 2579854
reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:2578092-2578307:-1:exon

position:2578092:-1
position: 2578092
reference: sequence
type: ReverseStrandPosition
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position:2578307:-1
position: 2578307
reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:2573168-2573356:-1:exon

position:2573168:-1
position: 2573168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2573356:-1
position: 2573356
reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:2564442-2564611:-1:exon

position:2564442:-1
position: 2564442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2564611:-1
position: 2564611
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:2557329-2557485:-1:exon

position:2557329:-1
position: 2557329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2557485:-1
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reference: sequence
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urn:…
SIO_000300: 24
SIO_000628: feature:2522618-2522809:-1:exon

position:2522618:-1
position: 2522618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2522809:-1
position: 2522809
reference: sequence
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urn:…
SIO_000300: 25
SIO_000628: feature:2521702-2521828:-1:exon

position:2521702:-1
position: 2521702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2521828:-1
position: 2521828
reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:2502287-2502489:-1:exon

position:2502287:-1
position: 2502287
reference: sequence
type: ReverseStrandPosition
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position:2502489:-1
position: 2502489
reference: sequence
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urn:…
SIO_000300: 27
SIO_000628: feature:2468277-2468468:-1:exon

position:2468277:-1
position: 2468277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2468468:-1
position: 2468468
reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:2462363-2462501:-1:exon

position:2462363:-1
position: 2462363
reference: sequence
type: ReverseStrandPosition
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position:2462501:-1
position: 2462501
reference: sequence
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urn:…
SIO_000300: 29
SIO_000628: feature:2458406-2458593:-1:exon

position:2458406:-1
position: 2458406
reference: sequence
type: ReverseStrandPosition
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position:2458593:-1
position: 2458593
reference: sequence
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urn:…
SIO_000300: 30
SIO_000628: feature:2449236-2449430:-1:exon

position:2449236:-1
position: 2449236
reference: sequence
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position:2449430:-1
position: 2449430
reference: sequence
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urn:…
SIO_000300: 31
SIO_000628: feature:2445442-2445558:-1:exon

position:2445442:-1
position: 2445442
reference: sequence
type: ReverseStrandPosition
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position:2445558:-1
position: 2445558
reference: sequence
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urn:…
SIO_000300: 32
SIO_000628: feature:2443294-2443407:-1:exon

position:2443294:-1
position: 2443294
reference: sequence
type: ReverseStrandPosition
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position:2443407:-1
position: 2443407
reference: sequence
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urn:…
SIO_000300: 33
SIO_000628: feature:2442884-2442979:-1:exon

position:2442884:-1
position: 2442884
reference: sequence
type: ReverseStrandPosition
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position:2442979:-1
position: 2442979
reference: sequence
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urn:…
SIO_000300: 34
SIO_000628: feature:2435244-2435447:-1:exon

position:2435244:-1
position: 2435244
reference: sequence
type: ReverseStrandPosition
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position:2435447:-1
position: 2435447
reference: sequence
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urn:…
SIO_000300: 35
SIO_000628: feature:2434269-2434393:-1:exon

position:2434269:-1
position: 2434269
reference: sequence
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position:2434393:-1
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reference: sequence
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urn:…
SIO_000300: 36
SIO_000628: feature:2433295-2433391:-1:exon

position:2433295:-1
position: 2433295
reference: sequence
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position:2433391:-1
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reference: sequence
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urn:…
SIO_000300: 37
SIO_000628: feature:2422967-2423071:-1:exon

position:2422967:-1
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CSMD1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: CSMD1
product: CUB and Sushi multiple domains 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003509135.1
SIO_010081: CSMD1
so part of: CSMD1
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location: region:2205014-4281285:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 71
SIO_000628: feature:2205014-2207694:-1:exon

position:2207694:-1
position: 2207694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSMD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CSMD1
product: CUB and Sushi multiple domains 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_027530259.1
SIO_010081: CSMD1
subclass of: SO_0000673
so part of: CSMD1
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urn:…
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SIO_000300: 70
SIO_000628: feature:2205014-2208197:-1:exon

CSMD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CSMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUB and sushi domain-containing protein 1 isoform X2
translation: MAASLCPPRTPPGRRAAHWLGLVRVGGAGVPRPTPNKSPSPACARRRAGRARESAARRGAGSQAPEAGPGLGWRRPSSIPSRWEGMVESSRRGSGSLCREQPVFRAPRLPSRACLSSLPRRPLPASSPPSRGSHSLAAFPAASAPGLSGGARSSLRLAPSRSLAASVPSCPAGRALVPGPGPAARCRRSEQLSSACSGFGTRCYESEASRAPRPAGGVGCAAGPETGISPQLASPSGDSLALSVALLCLGGAGRVREEPSLSCACGISADMTAWGKFESLLLALLALCAGLLTAAQGQNCGGLVQGPNGTIESPGFPHGYPNYANCTWIIITGERNRIQLSFHTFALEEDFDILSVYDGQLQQGNLKVRLSGFQLPSSIVSSGSILTLWFTTDFAVSAQGFKALYEVLPSHTCGNPGEILKGVLHGTRFNIGDKIRYSCLSGYVLEGHAILTCIVSPGNGASWDFPAPFCRAEGACGGTLRGTSSSISSPHFPSEYENNADCTWTILAEPGDTIALVFTDFQLEEGYDFLEISGTEAPSIWLTGMNLPSPVISSKNWLRLHFTSDSNHRRKGFNAQFQVKKAIELKSRGVKVMPSKDSSHKNSVLTQGGVALVSDMCPDPGIPENGRRVGSDFRVGANVQFSCEDNYVLQGSKSITCQRVTETLAAWSDHRPICRARTCGSNLRGPSGVITSPNYPVQYEDNAHCVWVITTTDPDKVIKLAFEEFELERGYDTLTVGDAGKVGDTRTVLYVLTGSSVPDLIVSMSNQMWLHLQSDDSIASPGFKAIYQEIEKGGCGDPGIPAYGKRTGSSFLHGDTLTFECQAAFELVGERVITCQQNNQWSGNKPSCVFSCFFNFTASSGIILSPNYPEEYGNNMNCVWLIISEPGSRIHLIFNDFDVEPQFDFLAVKDDGISDITVLGTFSGNEVPSQLASSGHIVRLEFQSDHSTTGRGFNITYTTFGQNECHDPGIPINGRRFGDRFLLGSSVSFHCDDGFVKTQGSESITCILQDGNVVWSSTVPRCEAPCGGHLTASSGVILPPGWPGYYKDSLNCEWIIEAKPGHSIKITFDRFQTEVNYDTLEVRDGPASSSPLIGEYHGTQAPQFLISTGNFMYLLFSTDNSRSSVGFLIRYESVTLESDSCLDPGIPVNGHRHGSHFGIRSTVTFSCDPGYTLSDDEPLVCERNHQWNHALPSCDALCGGYIHGKSGTVLSPGFPDFYPNSLNCTWTIEVSHGKGVQMIFHTFHLESSHDYLLITEDGSFSEPVARLTGSVLPHTIKAGLFGNFTAQLRFISDFSISYEGFNITFSEYDLEPCDDPGVPAFSRRIGFHFGVGDALTFSCFPGYRLEGATKLTCLGGGRRVWSAPLPRCVAECGASVKGNEGTLLSPNFPSNYDNNHECIYKIETEAGKGIHLRAQSFQLFEGDILKVYDGKDSSSRPLGAFTRNELVGLILNSTSNHLWLEFNSNGSDTDQGFQLTYTSFDLVKCEDPGTPNYGYRIRDEGHFTDTVILYSCNPGYAMHGGGTLTCLSGDRRVWDRPLPSCVAECGGRIHAATSGRILSPGYPAPYDNNLHCTWVVEADPGKTISLHFIVFDTELAHDILRVWDGPADSAILLKEWSGSALPEDIHSTFNSLTLQFDSDFFISKSGFSVQFSTSIASTCNDPGMPQNGTRYGDSREPGDTITFQCDPGYQLQGQAKITCVQLNNRFFWQPDPPTCIAACGGNLTGPAGVILSPNYPQPYPPGKECDWRVRVNPDFVIALIFKSFNMEPSYDFLHIYEGEDSNSPLIGSFQGSQAPERIESSGNSLFLAFRSDASVGLSGFAIEFKEKPREACFDPGNIMNGTRIGTDFKLGSTVTYQCDSGYKIADPSSITCVIGGDGKPAWNRVLPSCNAPCGGQYTGSEGVVLSPNYPHNYTAGQICLYSITVPKEFVVFGQFAYFQTALNDLAELFDGTHPQARLLSSLSGSHSGETLPLATSNQILLRFSAKSGAPARGFHFVYQA…
SIO_010081: CSMD1
subclass of: SO_0000673
so part of: CSMD1
location: complement(join(2208038..2208197,2208299..2208431,2217816..2217903,2218648..2218760,2221611..2221769,2230232..2230411,2232872..2232983,2234970..2235043,2236544..2236717,2237176..2237349,2239682..2239861,2240493..2240669,2245390..2245572,2248023..2248196,2255449..2255637,2266376..2266549,2267931..2268104,2278653..2278826,2285735..2285929,2303646..2303831,2331501..2331689,2338776..2338922,2343616..2343804,2356036..2356149,2357215..2357295,2358063..2358208,2360113..2360290,2365995..2366183,2384158..2384367,2393575..2393691,2397267..2397336,2401024..2401142,2422967..2423071,2433295..2433391,2434269..2434393,2435244..2435447,2442884..2442979,2443294..2443407,2445442..2445558,2449236..2449430,2458406..2458593,2462363..2462501,2468277..2468468,2502287..2502489,2521702..2521828,2522618..2522809,2557329..2557485,2564442..2564611,2573168..2573356,2578092..2578307,2579738..2579854,2593265..2593453,2609891..2610078,2613444..2613582,2616700..2616894,2618709..2619035,2620848..2621030,2677827..2677939,2696564..2696667,2770229..2770350,2783177..2783301,2823189..2823276,2916372..2916449,2984851..2984963,3256609..3256816,3282968..3283162,3652748..3652860,3887330..3887546,4280305..4281193))
location: region:2208038-4281193:-1
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XP_027386061.1
type: Protein
SIO_000068: ncbiprotein

position:2208038:-1
position: 2208038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4281193:-1
position: 4281193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4280305-4281193:-1:exon

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urn:…
SIO_000300: 7
SIO_000628: feature:2916372-2916449:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2823189-2823276:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2783177-2783301:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2770229-2770350:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2696564-2696667:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2677827-2677939:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2620848-2621030:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2618709-2619035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2616700-2616894:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2613444-2613582:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2609891-2610078:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2593265-2593453:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2579738-2579854:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2578092-2578307:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2573168-2573356:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2564442-2564611:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2557329-2557485:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2522618-2522809:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2521702-2521828:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2502287-2502489:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2468277-2468468:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2462363-2462501:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2458406-2458593:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2449236-2449430:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2445442-2445558:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2443294-2443407:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2442884-2442979:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2435244-2435447:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2434269-2434393:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2433295-2433391:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2422967-2423071:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2401024-2401142:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2397267-2397336:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2393575-2393691:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2384158-2384367:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2365995-2366183:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2360113-2360290:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2358063-2358208:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2357215-2357295:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2356036-2356149:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2343616-2343804:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2338776-2338922:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2331501-2331689:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2303646-2303831:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2285735-2285929:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2278653-2278826:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2267931-2268104:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:2266376-2266549:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:2255449-2255637:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:2248023-2248196:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:2245390-2245572:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:2240493-2240669:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:2239682-2239861:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:2237176-2237349:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:2236544-2236717:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:2234970-2235043:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:2232872-2232983:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:2230232-2230411:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:2221611-2221769:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:2218648-2218760:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:2217816-2217903:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:2208299-2208431:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:2208038-2208197:-1:exon

CSMD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CSMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUB and sushi domain-containing protein 1 isoform X1
translation: MAASLCPPRTPPGRRAAHWLGLVRVGGAGVPRPTPNKSPSPACARRRAGRARESAARRGAGSQAPEAGPGLGWRRPSSIPSRWEGMVESSRRGSGSLCREQPVFRAPRLPSRACLSSLPRRPLPASSPPSRGSHSLAAFPAASAPGLSGGARSSLRLAPSRSLAASVPSCPAGRALVPGPGPAARCRRSEQLSSACSGFGTRCYESEASRAPRPAGGVGCAAGPETGISPQLASPSGDSLALSVALLCLGGAGRVREEPSLSCACGISADMTAWGKFESLLLALLALCAGLLTAAQGQNCGGLVQGPNGTIESPGFPHGYPNYANCTWIIITGERNRIQLSFHTFALEEDFDILSVYDGQLQQGNLKVRLSGFQLPSSIVSSGSILTLWFTTDFAVSAQGFKALYEVLPSHTCGNPGEILKGVLHGTRFNIGDKIRYSCLSGYVLEGHAILTCIVSPGNGASWDFPAPFCRAEGACGGTLRGTSSSISSPHFPSEYENNADCTWTILAEPGDTIALVFTDFQLEEGYDFLEISGTEAPSIWLTGMNLPSPVISSKNWLRLHFTSDSNHRRKGFNAQFQVKKAIELKSRGVKVMPSKDSSHKNSVLTQGGVALVSDMCPDPGIPENGRRVGSDFRVGANVQFSCEDNYVLQGSKSITCQRVTETLAAWSDHRPICRARTCGSNLRGPSGVITSPNYPVQYEDNAHCVWVITTTDPDKVIKLAFEEFELERGYDTLTVGDAGKVGDTRTVLYVLTGSSVPDLIVSMSNQMWLHLQSDDSIASPGFKAIYQEIEKGGCGDPGIPAYGKRTGSSFLHGDTLTFECQAAFELVGERVITCQQNNQWSGNKPSCVFSCFFNFTASSGIILSPNYPEEYGNNMNCVWLIISEPGSRIHLIFNDFDVEPQFDFLAVKDDGISDITVLGTFSGNEVPSQLASSGHIVRLEFQSDHSTTGRGFNITYTTFGQNECHDPGIPINGRRFGDRFLLGSSVSFHCDDGFVKTQGSESITCILQDGNVVWSSTVPRCEAPCGGHLTASSGVILPPGWPGYYKDSLNCEWIIEAKPGHSIKITFDRFQTEVNYDTLEVRDGPASSSPLIGEYHGTQAPQFLISTGNFMYLLFSTDNSRSSVGFLIRYESVTLESDSCLDPGIPVNGHRHGSHFGIRSTVTFSCDPGYTLSDDEPLVCERNHQWNHALPSCDALCGGYIHGKSGTVLSPGFPDFYPNSLNCTWTIEVSHGKGVQMIFHTFHLESSHDYLLITEDGSFSEPVARLTGSVLPHTIKAGLFGNFTAQLRFISDFSISYEGFNITFSEYDLEPCDDPGVPAFSRRIGFHFGVGDALTFSCFPGYRLEGATKLTCLGGGRRVWSAPLPRCVAECGASVKGNEGTLLSPNFPSNYDNNHECIYKIETEAGKGIHLRAQSFQLFEGDILKVYDGKDSSSRPLGAFTRNELVGLILNSTSNHLWLEFNSNGSDTDQGFQLTYTSFDLVKCEDPGTPNYGYRIRDEGHFTDTVILYSCNPGYAMHGGGTLTCLSGDRRVWDRPLPSCVAECGGRIHAATSGRILSPGYPAPYDNNLHCTWVVEADPGKTISLHFIVFDTELAHDILRVWDGPADSAILLKEWSGSALPEDIHSTFNSLTLQFDSDFFISKSGFSVQFSTSIASTCNDPGMPQNGTRYGDSREPGDTITFQCDPGYQLQGQAKITCVQLNNRFFWQPDPPTCIAACGGNLTGPAGVILSPNYPQPYPPGKECDWRVRVNPDFVIALIFKSFNMEPSYDFLHIYEGEDSNSPLIGSFQGSQAPERIESSGNSLFLAFRSDASVGLSGFAIEFKEKPREACFDPGNIMNGTRIGTDFKLGSTVTYQCDSGYKIADPSSITCVIGGDGKPAWNRVLPSCNAPCGGQYTGSEGVVLSPNYPHNYTAGQICLYSITVPKEFVVFGQFAYFQTALNDLAELFDGTHPQARLLSSLSGSHSGETLPLATSNQILLRFSAKSGAPARGFHFVYQA…
SIO_010081: CSMD1
subclass of: SO_0000673
so part of: CSMD1
location: complement(join(2208038..2208197,2208299..2208431,2217816..2217903,2218648..2218760,2221611..2221769,2224972..2225016,2230232..2230411,2232872..2232983,2234970..2235043,2236544..2236717,2237176..2237349,2239682..2239861,2240493..2240669,2245390..2245572,2248023..2248196,2255449..2255637,2266376..2266549,2267931..2268104,2278653..2278826,2285735..2285929,2303646..2303831,2331501..2331689,2338776..2338922,2343616..2343804,2356036..2356149,2357215..2357295,2358063..2358208,2360113..2360290,2365995..2366183,2384158..2384367,2393575..2393691,2397267..2397336,2401024..2401142,2422967..2423071,2433295..2433391,2434269..2434393,2435244..2435447,2442884..2442979,2443294..2443407,2445442..2445558,2449236..2449430,2458406..2458593,2462363..2462501,2468277..2468468,2502287..2502489,2521702..2521828,2522618..2522809,2557329..2557485,2564442..2564611,2573168..2573356,2578092..2578307,2579738..2579854,2593265..2593453,2609891..2610078,2613444..2613582,2616700..2616894,2618709..2619035,2620848..2621030,2677827..2677939,2696564..2696667,2770229..2770350,2783177..2783301,2823189..2823276,2916372..2916449,2984851..2984963,3256609..3256816,3282968..3283162,3652748..3652860,3887330..3887546,4280305..4281193))
location: region:2208038-4281193:-1
so has part: feature:4280305-4281193:-1:exon
so has part: feature:3887330-3887546:-1:exon
so has part: feature:3652748-3652860:-1:exon
so has part: feature:3282968-3283162:-1:exon
so has part: feature:3256609-3256816:-1:exon
so has part: feature:2984851-2984963:-1:exon
so has part: feature:2916372-2916449:-1:exon
so has part: feature:2823189-2823276:-1:exon
so has part: feature:2783177-2783301:-1:exon
so has part: feature:2770229-2770350:-1:exon
so has part: feature:2696564-2696667:-1:exon
so has part: feature:2677827-2677939:-1:exon
so has part: feature:2620848-2621030:-1:exon
so has part: feature:2618709-2619035:-1:exon
so has part: feature:2616700-2616894:-1:exon
so has part: feature:2613444-2613582:-1:exon
so has part: feature:2609891-2610078:-1:exon
so has part: feature:2593265-2593453:-1:exon
so has part: feature:2579738-2579854:-1:exon
so has part: feature:2578092-2578307:-1:exon
so has part: feature:2573168-2573356:-1:exon
so has part: feature:2564442-2564611:-1:exon
so has part: feature:2557329-2557485:-1:exon
so has part: feature:2522618-2522809:-1:exon
so has part: feature:2521702-2521828:-1:exon
so has part: feature:2502287-2502489:-1:exon
so has part: feature:2468277-2468468:-1:exon
so has part: feature:2462363-2462501:-1:exon
so has part: feature:2458406-2458593:-1:exon
so has part: feature:2449236-2449430:-1:exon
so has part: feature:2445442-2445558:-1:exon
so has part: feature:2443294-2443407:-1:exon
so has part: feature:2442884-2442979:-1:exon
so has part: feature:2435244-2435447:-1:exon
so has part: feature:2434269-2434393:-1:exon
so has part: feature:2433295-2433391:-1:exon
so has part: feature:2422967-2423071:-1:exon
so has part: feature:2401024-2401142:-1:exon
so has part: feature:2397267-2397336:-1:exon
so has part: feature:2393575-2393691:-1:exon
so has part: feature:2384158-2384367:-1:exon
so has part: feature:2365995-2366183:-1:exon
so has part: feature:2360113-2360290:-1:exon
so has part: feature:2358063-2358208:-1:exon
so has part: feature:2357215-2357295:-1:exon
so has part: feature:2356036-2356149:-1:exon
so has part: feature:2343616-2343804:-1:exon
so has part: feature:2338776-2338922:-1:exon
so has part: feature:2331501-2331689:-1:exon
so has part: feature:2303646-2303831:-1:exon
so has part: feature:2285735-2285929:-1:exon
so has part: feature:2278653-2278826:-1:exon
so has part: feature:2267931-2268104:-1:exon
so has part: feature:2266376-2266549:-1:exon
so has part: feature:2255449-2255637:-1:exon
so has part: feature:2248023-2248196:-1:exon
so has part: feature:2245390-2245572:-1:exon
so has part: feature:2240493-2240669:-1:exon
so has part: feature:2239682-2239861:-1:exon
so has part: feature:2237176-2237349:-1:exon
so has part: feature:2236544-2236717:-1:exon
so has part: feature:2234970-2235043:-1:exon
so has part: feature:2232872-2232983:-1:exon
so has part: feature:2230232-2230411:-1:exon
so has part: feature:2224972-2225016:-1:exon
so has part: feature:2221611-2221769:-1:exon

XP_027386060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4280305-4281193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3887330-3887546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3652748-3652860:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3282968-3283162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3256609-3256816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2984851-2984963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2916372-2916449:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2823189-2823276:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2783177-2783301:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2770229-2770350:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2696564-2696667:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2677827-2677939:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2620848-2621030:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2618709-2619035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2616700-2616894:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2613444-2613582:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2609891-2610078:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2593265-2593453:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2579738-2579854:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2578092-2578307:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2573168-2573356:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2564442-2564611:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2557329-2557485:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2522618-2522809:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2521702-2521828:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2502287-2502489:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2468277-2468468:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2462363-2462501:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2458406-2458593:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2449236-2449430:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2445442-2445558:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2443294-2443407:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2442884-2442979:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2435244-2435447:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2434269-2434393:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2433295-2433391:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2422967-2423071:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2401024-2401142:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2397267-2397336:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2393575-2393691:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2384158-2384367:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2365995-2366183:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2360113-2360290:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2358063-2358208:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2357215-2357295:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2356036-2356149:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2343616-2343804:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2338776-2338922:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2331501-2331689:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2303646-2303831:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2285735-2285929:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2278653-2278826:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2267931-2268104:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:2266376-2266549:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:2255449-2255637:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:2248023-2248196:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:2245390-2245572:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:2240493-2240669:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:2239682-2239861:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:2237176-2237349:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:2236544-2236717:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:2234970-2235043:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:2232872-2232983:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:2230232-2230411:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:2224972-2225016:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:2221611-2221769:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:2218648-2218760:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:2217816-2217903:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:2208299-2208431:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:2208038-2208197:-1:exon

LOC113885111
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885111
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2883305..2883406
location: region:2883305-2883406:1
so has part: feature:2883305-2883406:1:exon
subclass of: SO_0000623

113885111
type: Gene
SIO_000068: ncbigene

position:2883305:1
position: 2883305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2883406:1
position: 2883406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2883305-2883406:1:exon

LOC113885111
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: snRNA
gene: LOC113885111
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509151.1
SIO_010081: LOC113885111
subclass of: SO_0000673
so part of: LOC113885111
location: 2883305..2883406
location: region:2883305-2883406:1
so has part: feature:2883305-2883406:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2883305-2883406:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3313240..3313311)
location: region:3313240-3313311:-1
so has part: feature:3313240-3313311:-1:exon
subclass of: SO_0000663

113885140
type: Gene
SIO_000068: ncbigene

position:3313240:-1
position: 3313240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3313311:-1
position: 3313311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3313240-3313311:-1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30522
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3313276..3313278),aa:Cys, seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: complement(3313240..3313311)
location: region:3313240-3313311:-1
so has part: feature:3313240-3313311:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3313240-3313311:-1:exon

LOC113884986
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4352524..4355533
location: region:4352524-4355533:1
so has part: feature:4352524-4355533:1:exon
subclass of: SO_0000010

113884986
type: Gene
SIO_000068: ncbigene

position:4352524:1
position: 4352524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4355533:1
position: 4355533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4352524-4355533:1:exon

LOC113884986
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884986
product: histone H3-like centromeric protein A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 109 samples with support for all annotated introns
transcript id: XM_027530074.1
SIO_010081: LOC113884986
subclass of: SO_0000673
so part of: LOC113884986
location: join(4352524..4352776,4353289..4353523,4354347..4355533)
location: region:4352524-4355533:1
so has part: feature:4352524-4352776:1:exon
so has part: feature:4353289-4353523:1:exon
so has part: feature:4354347-4355533:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4352524-4352776:1:exon

position:4352776:1
position: 4352776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4353289-4353523:1:exon

position:4353289:1
position: 4353289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4353523:1
position: 4353523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4354347-4355533:1:exon

position:4354347:1
position: 4354347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884986
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884986
product: histone H3-like centromeric protein A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_027530075.1
SIO_010081: LOC113884986
subclass of: SO_0000673
so part of: LOC113884986
location: join(4352524..4352776,4353289..4353523,4353769..4353875)
location: region:4352524-4353875:1
so has part: feature:4352524-4352776:1:exon
so has part: feature:4353289-4353523:1:exon
so has part: feature:4353769-4353875:1:exon

position:4353875:1
position: 4353875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4352524-4352776:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4353289-4353523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4353769-4353875:1:exon

position:4353769:1
position: 4353769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884986
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3-like centromeric protein A
translation: MGPRRQKRKPETPRRRPASPAPAAPPPALSLGTSSRPLARRRHTVLKEIRTLQKTTHLLLRKSPFCRLAREICVQFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLSLHAGRVRLFPDVQLARRIRGIQEGLG
SIO_010081: LOC113884986
subclass of: SO_0000673
so part of: LOC113884986
location: join(4352573..4352776,4353289..4353498)
location: region:4352573-4353498:1
so has part: feature:4352573-4352776:1:exon
so has part: feature:4353289-4353498:1:exon

XP_027385875.1
type: Protein
SIO_000068: ncbiprotein

position:4352573:1
position: 4352573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4353498:1
position: 4353498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4352573-4352776:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4353289-4353498:1:exon

LOC113884986
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3-like centromeric protein A
translation: MGPRRQKRKPETPRRRPASPAPAAPPPALSLGTSSRPLARRRHTVLKEIRTLQKTTHLLLRKSPFCRLAREICVQFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLSLHAGRVRLFPDVQLARRIRGIQEGLG
SIO_010081: LOC113884986
subclass of: SO_0000673
so part of: LOC113884986
location: join(4352573..4352776,4353289..4353498)
location: region:4352573-4353498:1
so has part: feature:4352573-4352776:1:exon
so has part: feature:4353289-4353498:1:exon

XP_027385876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4352573-4352776:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4353289-4353498:1:exon

LOC113884891
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884891
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4725363..4725945
location: region:4725363-4725945:1
so has part: feature:4725363-4725945:1:exon

113884891
type: Gene
SIO_000068: ncbigene

position:4725363:1
position: 4725363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4725945:1
position: 4725945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4725363-4725945:1:exon

LOC113884891
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884891
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113884891
subclass of: SO_0000673
so part of: LOC113884891
location: 4725363..4725945
location: region:4725363-4725945:1
so has part: feature:4725363-4725945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4725363-4725945:1:exon

LOC113884788
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4962032..4962802
location: region:4962032-4962802:1
so has part: feature:4962032-4962802:1:exon

113884788
type: Gene
SIO_000068: ncbigene

position:4962032:1
position: 4962032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4962802:1
position: 4962802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4962032-4962802:1:exon

LOC113884788
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884788
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113884788
subclass of: SO_0000673
so part of: LOC113884788
location: 4962032..4962802
location: region:4962032-4962802:1
so has part: feature:4962032-4962802:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4962032-4962802:1:exon

LOC113885100
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885100
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5131450..5131557
location: region:5131450-5131557:1
so has part: feature:5131450-5131557:1:exon
subclass of: SO_0000623

113885100
type: Gene
SIO_000068: ncbigene

position:5131450:1
position: 5131450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5131557:1
position: 5131557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5131450-5131557:1:exon

LOC113885100
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: snRNA
gene: LOC113885100
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509141.1
SIO_010081: LOC113885100
subclass of: SO_0000673
so part of: LOC113885100
location: 5131450..5131557
location: region:5131450-5131557:1
so has part: feature:5131450-5131557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5131450-5131557:1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5415204..5415276
location: region:5415204-5415276:1
so has part: feature:5415204-5415276:1:exon
subclass of: SO_0000663

113885125
type: Gene
SIO_000068: ncbigene

position:5415204:1
position: 5415204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5415276:1
position: 5415276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5415204-5415276:1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30522
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5415237..5415239,aa:Gly,seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: 5415204..5415276
location: region:5415204-5415276:1
so has part: feature:5415204-5415276:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5415204-5415276:1:exon

MCPH1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: MCPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5510096..5741845
location: region:5510096-5741845:1
so has part: feature:5510096-5741845:1:exon
subclass of: SO_0000010

113885008
type: Gene
SIO_000068: ncbigene

position:5510096:1
position: 5510096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5741845:1
position: 5741845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5510096-5741845:1:exon

MCPH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: MCPH1
product: microcephalin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_027530112.1
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5510096..5510194,5511174..5511265,5515146..5515264,5532297..5532384,5535304..5535418,5536378..5536521,5539603..5539692,5541456..5542574,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5731023..5731459,5741501..5741845)
location: region:5510096-5741845:1
so has part: feature:5510096-5510194:1:exon
so has part: feature:5511174-5511265:1:exon
so has part: feature:5515146-5515264:1:exon
so has part: feature:5532297-5532384:1:exon
so has part: feature:5535304-5535418:1:exon
so has part: feature:5536378-5536521:1:exon
so has part: feature:5539603-5539692:1:exon
so has part: feature:5541456-5542574:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5731023-5731459:1:exon
so has part: feature:5741501-5741845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5510096-5510194:1:exon

position:5510194:1
position: 5510194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5511174-5511265:1:exon

position:5511174:1
position: 5511174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5511265:1
position: 5511265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5515146-5515264:1:exon

position:5515146:1
position: 5515146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5515264:1
position: 5515264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5532297-5532384:1:exon

position:5532297:1
position: 5532297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5532384:1
position: 5532384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5535304-5535418:1:exon

position:5535304:1
position: 5535304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5535418:1
position: 5535418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5536378-5536521:1:exon

position:5536378:1
position: 5536378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5536521:1
position: 5536521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5539603-5539692:1:exon

position:5539603:1
position: 5539603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5539692:1
position: 5539692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5541456-5542574:1:exon

position:5541456:1
position: 5541456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5542574:1
position: 5542574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5553811-5553920:1:exon

position:5553811:1
position: 5553811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5553920:1
position: 5553920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5578363-5578400:1:exon

position:5578363:1
position: 5578363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5578400:1
position: 5578400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5580615-5580777:1:exon

position:5580615:1
position: 5580615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5580777:1
position: 5580777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5608009-5608086:1:exon

position:5608009:1
position: 5608009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5608086:1
position: 5608086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5730510-5730747:1:exon

position:5730510:1
position: 5730510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5730747:1
position: 5730747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5731023-5731459:1:exon

position:5731023:1
position: 5731023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5731459:1
position: 5731459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5741501-5741845:1:exon

position:5741501:1
position: 5741501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCPH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: MCPH1
product: microcephalin 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 178 samples with support for all annotated introns
transcript id: XM_027530116.1
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5510096..5510194,5511174..5511265,5515146..5515264,5532297..5532384,5535304..5535418,5536378..5536521,5539603..5539692,5541456..5542574,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5741501..5741845)
location: region:5510096-5741845:1
so has part: feature:5510096-5510194:1:exon
so has part: feature:5511174-5511265:1:exon
so has part: feature:5515146-5515264:1:exon
so has part: feature:5532297-5532384:1:exon
so has part: feature:5535304-5535418:1:exon
so has part: feature:5536378-5536521:1:exon
so has part: feature:5539603-5539692:1:exon
so has part: feature:5541456-5542574:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5741501-5741845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5510096-5510194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5511174-5511265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5515146-5515264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5532297-5532384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5535304-5535418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5536378-5536521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5539603-5539692:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5541456-5542574:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5553811-5553920:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5578363-5578400:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5580615-5580777:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5608009-5608086:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5730510-5730747:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5741501-5741845:1:exon

MCPH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: MCPH1
product: microcephalin 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_027530118.1
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5510096..5510194,5511174..5511265,5515146..5515264,5532297..5532384,5535304..5535418,5536378..5536521,5539603..5539692,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5731023..5731459,5741501..5741845)
location: region:5510096-5741845:1
so has part: feature:5510096-5510194:1:exon
so has part: feature:5511174-5511265:1:exon
so has part: feature:5515146-5515264:1:exon
so has part: feature:5532297-5532384:1:exon
so has part: feature:5535304-5535418:1:exon
so has part: feature:5536378-5536521:1:exon
so has part: feature:5539603-5539692:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5731023-5731459:1:exon
so has part: feature:5741501-5741845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5510096-5510194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5511174-5511265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5515146-5515264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5532297-5532384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5535304-5535418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5536378-5536521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5539603-5539692:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5553811-5553920:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5578363-5578400:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5580615-5580777:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5608009-5608086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5730510-5730747:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5731023-5731459:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5741501-5741845:1:exon

MCPH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: MCPH1
product: microcephalin 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_027530120.1
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5510096..5510194,5511174..5511265,5515146..5515264,5532297..5532384,5535304..5535418,5536378..5536521,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5731023..5731459,5741501..5741845)
location: region:5510096-5741845:1
so has part: feature:5510096-5510194:1:exon
so has part: feature:5511174-5511265:1:exon
so has part: feature:5515146-5515264:1:exon
so has part: feature:5532297-5532384:1:exon
so has part: feature:5535304-5535418:1:exon
so has part: feature:5536378-5536521:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5731023-5731459:1:exon
so has part: feature:5741501-5741845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5510096-5510194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5511174-5511265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5515146-5515264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5532297-5532384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5535304-5535418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5536378-5536521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5553811-5553920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5578363-5578400:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5580615-5580777:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5608009-5608086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5730510-5730747:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5731023-5731459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5741501-5741845:1:exon

MCPH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: MCPH1
product: microcephalin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_027530113.1
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5510096..5510194,5511174..5511265,5515146..5515264,5532297..5532384,5535304..5535418,5536378..5536521,5539603..5539692,5541456..5542574,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5730967..5731459,5741501..5741620)
location: region:5510096-5741620:1
so has part: feature:5510096-5510194:1:exon
so has part: feature:5511174-5511265:1:exon
so has part: feature:5515146-5515264:1:exon
so has part: feature:5532297-5532384:1:exon
so has part: feature:5535304-5535418:1:exon
so has part: feature:5536378-5536521:1:exon
so has part: feature:5539603-5539692:1:exon
so has part: feature:5541456-5542574:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5730967-5731459:1:exon
so has part: feature:5741501-5741620:1:exon

position:5741620:1
position: 5741620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5510096-5510194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5511174-5511265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5515146-5515264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5532297-5532384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5535304-5535418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5536378-5536521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5539603-5539692:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5541456-5542574:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5553811-5553920:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5578363-5578400:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5580615-5580777:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5608009-5608086:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5730510-5730747:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5730967-5731459:1:exon

position:5730967:1
position: 5730967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5741501-5741620:1:exon

MCPH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: MCPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microcephalin isoform X1
translation: MAAPGSLGGPVLKDVVAYVEVWSANGTENYSKTFRNQLVDMGAKVSKTFNKQVTHVVFKDGYQSTWEKAQKRGVKLVSVLWVDKCRVAGVHIDESLFPAANTNQHLPSLLKKKRKCMQPKDFIPRTPENDKRLQRKFEKMAKELQQQKTTLGTNVPVLSFESNGSLVYSPTGKVYRGHHSAMKKRLQEMKEKRENLSPTSSQMIEQSDDNTVNLLHEASLNLSHDTLCSDNSLAGGLPVSADNLCGGSASGTQEGKLFEFITERGSDVCAASPVLQTGSVGPSAAPCPLDLLTPHRSTSSPPKAETPQQSRAAGGVVTPISKPSKPVAQGSSDGKKRLSPVSSATKGRPGGREQHMGSSAKRKKTPENSCPGLEERRKRRRSLGQRPAPRLRLWKAERGLRSVRRPAVKSLALEEFSYDDYFSPDNLKERVSEGLLGEQLPSRPPALHCQRSLSKTERTSLLDRADLSLIGRSPRPAVSTCSTAKPALSGADAGLGGGTPGPCPRAETQGGGDVRPAGGDAPQTRSQLIPQTGPQGDRSPLKGSREETEEWTDPQSTQKEGAPPETTESAAAHSEGKPSAAGGCAEDRPAGARGAPAHGSSGSVKSGPTRHSAVAGSRKGCQDLLRLREESGKKGRGQEPTRTLVMTSMPSEKYSVVIQVVNRLKGFSLAQEVCGSTTHVLAGKPRRTLSVLLGIARGCWILSFEWVLWSLEMGHWISEEPFELSNYFPAAPLCRQERLSSAGQYRGTLFADQPTMFISPASNPPRAKLGELVMLCGGRVTQVPRQASIFIGPSPGRKKETVKYLSETWILACVQGPAGRPAPGSSAGRPLPLLATLLPAAPPDARCPCQPPCSWQLRRMPAAPAGRPAPCSSAGGCCLYRPPCSLQLRQMPTAPTSRPAPCSSTGRPLLLPATPPPAAQPEAAAPATAPLRVLTCPRAHSAVFYSKATFGFYFQKQIPSVSTRSVPLRTTCCRDEDTFQPTAAVNSPPLVLGHRKDAFVHHHVCACVWCMKTCLHVAF
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5510155..5510194,5511174..5511265,5515146..5515264,5532297..5532384,5535304..5535418,5536378..5536521,5539603..5539692,5541456..5542574,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5731023..5731459,5741501..5741689)
location: region:5510155-5741689:1
so has part: feature:5510155-5510194:1:exon
so has part: feature:5511174-5511265:1:exon
so has part: feature:5515146-5515264:1:exon
so has part: feature:5532297-5532384:1:exon
so has part: feature:5535304-5535418:1:exon
so has part: feature:5536378-5536521:1:exon
so has part: feature:5539603-5539692:1:exon
so has part: feature:5541456-5542574:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5731023-5731459:1:exon
so has part: feature:5741501-5741689:1:exon

XP_027385913.1
type: Protein
SIO_000068: ncbiprotein

position:5510155:1
position: 5510155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5741689:1
position: 5741689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5510155-5510194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5511174-5511265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5515146-5515264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5532297-5532384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5535304-5535418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5536378-5536521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5539603-5539692:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5541456-5542574:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5553811-5553920:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5578363-5578400:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5580615-5580777:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5608009-5608086:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5730510-5730747:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5731023-5731459:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5741501-5741689:1:exon

MCPH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: MCPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microcephalin isoform X6
translation: MAAPGSLGGPVLKDVVAYVEVWSANGTENYSKTFRNQLVDMGAKVSKTFNKQVTHVVFKDGYQSTWEKAQKRGVKLVSVLWVDKCRVAGVHIDESLFPAANTNQHLPSLLKKKRKCMQPKDFIPRTPENDKRLQRKFEKMAKELQQQKTTLGTNVPVLSFESNGSLVYSPTGKVYRGHHSAMKKRLQEMKEKRENLSPTSSQMIEQSDDNTVNLLHEASLNLSHDTLCSGVKSGPTRHSAVAGSRKGCQDLLRLREESGKKGRGQEPTRTLVMTSMPSEKYSVVIQVVNRLKGFSLAQEVCGSTTHVLAGKPRRTLSVLLGIARGCWILSFEWVLWSLEMGHWISEEPFELSNYFPAAPLCRQERLSSAGQYRGTLFADQPTMFISPASNPPRAKLGELVMLCGGRVTQVPRQASIFIGPSPGRKKETVKYLSETWILACVQGPAGRPAPGSSAGRPLPLLATLLPAAPPDARCPCQPPCSWQLRRMPAAPAGRPAPCSSAGGCCLYRPPCSLQLRQMPTAPTSRPAPCSSTGRPLLLPATPPPAAQPEAAAPATAPLRVLTCPRAHSAVFYSKATFGFYFQKQIPSVSTRSVPLRTTCCRDEDTFQPTAAVNSPPLVLGHRKDAFVHHHVCACVWCMKTCLHVAF
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5510155..5510194,5511174..5511265,5515146..5515264,5532297..5532384,5535304..5535418,5536378..5536521,5539603..5539692,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5731023..5731459,5741501..5741689)
location: region:5510155-5741689:1
so has part: feature:5510155-5510194:1:exon
so has part: feature:5511174-5511265:1:exon
so has part: feature:5515146-5515264:1:exon
so has part: feature:5532297-5532384:1:exon
so has part: feature:5535304-5535418:1:exon
so has part: feature:5536378-5536521:1:exon
so has part: feature:5539603-5539692:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5731023-5731459:1:exon
so has part: feature:5741501-5741689:1:exon

XP_027385919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5510155-5510194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5511174-5511265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5515146-5515264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5532297-5532384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5535304-5535418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5536378-5536521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5539603-5539692:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5553811-5553920:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5578363-5578400:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5580615-5580777:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5608009-5608086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5730510-5730747:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5731023-5731459:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5741501-5741689:1:exon

MCPH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: MCPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microcephalin isoform X7
translation: MAAPGSLGGPVLKDVVAYVEVWSANGTENYSKTFRNQLVDMGAKVSKTFNKQVTHVVFKDGYQSTWEKAQKRGVKLVSVLWVDKCRVAGVHIDESLFPAANTNQHLPSLLKKKRKCMQPKDFIPRTPENDKRLQRKFEKMAKELQQQKTTLGTNVPVLSFESNGSLVYSPTGKVYRGHHSAMKKRLQEMKEKRENLSPTCVKSGPTRHSAVAGSRKGCQDLLRLREESGKKGRGQEPTRTLVMTSMPSEKYSVVIQVVNRLKGFSLAQEVCGSTTHVLAGKPRRTLSVLLGIARGCWILSFEWVLWSLEMGHWISEEPFELSNYFPAAPLCRQERLSSAGQYRGTLFADQPTMFISPASNPPRAKLGELVMLCGGRVTQVPRQASIFIGPSPGRKKETVKYLSETWILACVQGPAGRPAPGSSAGRPLPLLATLLPAAPPDARCPCQPPCSWQLRRMPAAPAGRPAPCSSAGGCCLYRPPCSLQLRQMPTAPTSRPAPCSSTGRPLLLPATPPPAAQPEAAAPATAPLRVLTCPRAHSAVFYSKATFGFYFQKQIPSVSTRSVPLRTTCCRDEDTFQPTAAVNSPPLVLGHRKDAFVHHHVCACVWCMKTCLHVAF
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5510155..5510194,5511174..5511265,5515146..5515264,5532297..5532384,5535304..5535418,5536378..5536521,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5731023..5731459,5741501..5741689)
location: region:5510155-5741689:1
so has part: feature:5510155-5510194:1:exon
so has part: feature:5511174-5511265:1:exon
so has part: feature:5515146-5515264:1:exon
so has part: feature:5532297-5532384:1:exon
so has part: feature:5535304-5535418:1:exon
so has part: feature:5536378-5536521:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5731023-5731459:1:exon
so has part: feature:5741501-5741689:1:exon

XP_027385921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5510155-5510194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5511174-5511265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5515146-5515264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5532297-5532384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5535304-5535418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5536378-5536521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5553811-5553920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5578363-5578400:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5580615-5580777:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5608009-5608086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5730510-5730747:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5731023-5731459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5741501-5741689:1:exon

MCPH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: MCPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microcephalin isoform X4
translation: MAAPGSLGGPVLKDVVAYVEVWSANGTENYSKTFRNQLVDMGAKVSKTFNKQVTHVVFKDGYQSTWEKAQKRGVKLVSVLWVDKCRVAGVHIDESLFPAANTNQHLPSLLKKKRKCMQPKDFIPRTPENDKRLQRKFEKMAKELQQQKTTLGTNVPVLSFESNGSLVYSPTGKVYRGHHSAMKKRLQEMKEKRENLSPTSSQMIEQSDDNTVNLLHEASLNLSHDTLCSDNSLAGGLPVSADNLCGGSASGTQEGKLFEFITERGSDVCAASPVLQTGSVGPSAAPCPLDLLTPHRSTSSPPKAETPQQSRAAGGVVTPISKPSKPVAQGSSDGKKRLSPVSSATKGRPGGREQHMGSSAKRKKTPENSCPGLEERRKRRRSLGQRPAPRLRLWKAERGLRSVRRPAVKSLALEEFSYDDYFSPDNLKERVSEGLLGEQLPSRPPALHCQRSLSKTERTSLLDRADLSLIGRSPRPAVSTCSTAKPALSGADAGLGGGTPGPCPRAETQGGGDVRPAGGDAPQTRSQLIPQTGPQGDRSPLKGSREETEEWTDPQSTQKEGAPPETTESAAAHSEGKPSAAGGCAEDRPAGARGAPAHGSSGSVKSGPTRHSAVAGSRKGCQDLLRLREESGKKGRGQEPTRTLVMTSMPSEKYSVVIQVVNRLKGFSLAQEVCGSTTHVLAGKPRRTLSVLLGIARGCWILSFEWVLWSLEMGHWISEEPFELSNYFPAAPLCRQERLSSAGQYRGTLFADQPTMFISPASNPPRAKLGELVMLCGGRVTQVPRQASIFIGPSPGRKKETVKYLSETWILDSISQHKVCASENHLLP
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5510155..5510194,5511174..5511265,5515146..5515264,5532297..5532384,5535304..5535418,5536378..5536521,5539603..5539692,5541456..5542574,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5741501..5741553)
location: region:5510155-5741553:1
so has part: feature:5510155-5510194:1:exon
so has part: feature:5511174-5511265:1:exon
so has part: feature:5515146-5515264:1:exon
so has part: feature:5532297-5532384:1:exon
so has part: feature:5535304-5535418:1:exon
so has part: feature:5536378-5536521:1:exon
so has part: feature:5539603-5539692:1:exon
so has part: feature:5541456-5542574:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5741501-5741553:1:exon

XP_027385917.1
type: Protein
SIO_000068: ncbiprotein

position:5741553:1
position: 5741553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5510155-5510194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5511174-5511265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5515146-5515264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5532297-5532384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5535304-5535418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5536378-5536521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5539603-5539692:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5541456-5542574:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5553811-5553920:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5578363-5578400:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5580615-5580777:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5608009-5608086:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5730510-5730747:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5741501-5741553:1:exon

MCPH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: MCPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microcephalin isoform X2
translation: MAAPGSLGGPVLKDVVAYVEVWSANGTENYSKTFRNQLVDMGAKVSKTFNKQVTHVVFKDGYQSTWEKAQKRGVKLVSVLWVDKCRVAGVHIDESLFPAANTNQHLPSLLKKKRKCMQPKDFIPRTPENDKRLQRKFEKMAKELQQQKTTLGTNVPVLSFESNGSLVYSPTGKVYRGHHSAMKKRLQEMKEKRENLSPTSSQMIEQSDDNTVNLLHEASLNLSHDTLCSDNSLAGGLPVSADNLCGGSASGTQEGKLFEFITERGSDVCAASPVLQTGSVGPSAAPCPLDLLTPHRSTSSPPKAETPQQSRAAGGVVTPISKPSKPVAQGSSDGKKRLSPVSSATKGRPGGREQHMGSSAKRKKTPENSCPGLEERRKRRRSLGQRPAPRLRLWKAERGLRSVRRPAVKSLALEEFSYDDYFSPDNLKERVSEGLLGEQLPSRPPALHCQRSLSKTERTSLLDRADLSLIGRSPRPAVSTCSTAKPALSGADAGLGGGTPGPCPRAETQGGGDVRPAGGDAPQTRSQLIPQTGPQGDRSPLKGSREETEEWTDPQSTQKEGAPPETTESAAAHSEGKPSAAGGCAEDRPAGARGAPAHGSSGSVKSGPTRHSAVAGSRKGCQDLLRLREESGKKGRGQEPTRTLVMTSMPSEKYSVVIQVVNRLKGFSLAQEVCGSTTHVLAGKPRRTLSVLLGIARGCWILSFEWVLWSLEMGHWISEEPFELSNYFPAAPLCRQERLSSAGQYRGTLFADQPTMFISPASNPPRAKLGELVMLCGGRVTQVPRQASIFIGPSPGRKKETVKYLSETWILGEPTRTKEVLLDLCHLPSQLACKAQPAALLPAAPPDARCPCWPPCSLQLRQMPAAPASRPAPGSSAGCPLPLPAALLPAAPPEAAASTGRPAPCSSARCPLPLPAALLPAAPPDAHCSCQPPRPLQLSRRLLPLPPPHSAYSPVLVLTVLCFTAKRPSAFISRSRFHQSAQGLCL
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5510155..5510194,5511174..5511265,5515146..5515264,5532297..5532384,5535304..5535418,5536378..5536521,5539603..5539692,5541456..5542574,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5730967..5731459,5741501..5741534)
location: region:5510155-5741534:1
so has part: feature:5510155-5510194:1:exon
so has part: feature:5511174-5511265:1:exon
so has part: feature:5515146-5515264:1:exon
so has part: feature:5532297-5532384:1:exon
so has part: feature:5535304-5535418:1:exon
so has part: feature:5536378-5536521:1:exon
so has part: feature:5539603-5539692:1:exon
so has part: feature:5541456-5542574:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5730967-5731459:1:exon
so has part: feature:5741501-5741534:1:exon

XP_027385914.1
type: Protein
SIO_000068: ncbiprotein

position:5741534:1
position: 5741534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5510155-5510194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5511174-5511265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5515146-5515264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5532297-5532384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5535304-5535418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5536378-5536521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5539603-5539692:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5541456-5542574:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5553811-5553920:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5578363-5578400:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5580615-5580777:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5608009-5608086:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5730510-5730747:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5730967-5731459:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5741501-5741534:1:exon

MCPH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: MCPH1
product: microcephalin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027530114.1
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5515178..5515264,5530107..5530161,5532297..5532384,5535304..5535418,5536378..5536521,5539603..5539692,5541456..5542574,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5731023..5731459,5741501..5741845)
location: region:5515178-5741845:1
so has part: feature:5515178-5515264:1:exon
so has part: feature:5530107-5530161:1:exon
so has part: feature:5532297-5532384:1:exon
so has part: feature:5535304-5535418:1:exon
so has part: feature:5536378-5536521:1:exon
so has part: feature:5539603-5539692:1:exon
so has part: feature:5541456-5542574:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5731023-5731459:1:exon
so has part: feature:5741501-5741845:1:exon

position:5515178:1
position: 5515178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5515178-5515264:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5530107-5530161:1:exon

position:5530107:1
position: 5530107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5530161:1
position: 5530161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5532297-5532384:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5535304-5535418:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5536378-5536521:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5539603-5539692:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5541456-5542574:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5553811-5553920:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5578363-5578400:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5580615-5580777:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5608009-5608086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5730510-5730747:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5731023-5731459:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5741501-5741845:1:exon

MCPH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: MCPH1
product: microcephalin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027530115.1
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5515179..5515264,5535304..5535418,5536378..5536521,5539603..5539692,5541456..5542574,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5731023..5731459,5741501..5741845)
location: region:5515179-5741845:1
so has part: feature:5515179-5515264:1:exon
so has part: feature:5535304-5535418:1:exon
so has part: feature:5536378-5536521:1:exon
so has part: feature:5539603-5539692:1:exon
so has part: feature:5541456-5542574:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5731023-5731459:1:exon
so has part: feature:5741501-5741845:1:exon

position:5515179:1
position: 5515179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5515179-5515264:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5535304-5535418:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5536378-5536521:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5539603-5539692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5541456-5542574:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5553811-5553920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5578363-5578400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5580615-5580777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5608009-5608086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5730510-5730747:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5731023-5731459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5741501-5741845:1:exon

MCPH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: MCPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microcephalin isoform X3
translation: MQPKDFIPRTPENDKRLQRKFEKMAKELQQQKTTLGTNVPVLSFESNGSLVYSPTGKVYRGHHSAMKKRLQEMKEKRENLSPTSSQMIEQSDDNTVNLLHEASLNLSHDTLCSDNSLAGGLPVSADNLCGGSASGTQEGKLFEFITERGSDVCAASPVLQTGSVGPSAAPCPLDLLTPHRSTSSPPKAETPQQSRAAGGVVTPISKPSKPVAQGSSDGKKRLSPVSSATKGRPGGREQHMGSSAKRKKTPENSCPGLEERRKRRRSLGQRPAPRLRLWKAERGLRSVRRPAVKSLALEEFSYDDYFSPDNLKERVSEGLLGEQLPSRPPALHCQRSLSKTERTSLLDRADLSLIGRSPRPAVSTCSTAKPALSGADAGLGGGTPGPCPRAETQGGGDVRPAGGDAPQTRSQLIPQTGPQGDRSPLKGSREETEEWTDPQSTQKEGAPPETTESAAAHSEGKPSAAGGCAEDRPAGARGAPAHGSSGSVKSGPTRHSAVAGSRKGCQDLLRLREESGKKGRGQEPTRTLVMTSMPSEKYSVVIQVVNRLKGFSLAQEVCGSTTHVLAGKPRRTLSVLLGIARGCWILSFEWVLWSLEMGHWISEEPFELSNYFPAAPLCRQERLSSAGQYRGTLFADQPTMFISPASNPPRAKLGELVMLCGGRVTQVPRQASIFIGPSPGRKKETVKYLSETWILACVQGPAGRPAPGSSAGRPLPLLATLLPAAPPDARCPCQPPCSWQLRRMPAAPAGRPAPCSSAGGCCLYRPPCSLQLRQMPTAPTSRPAPCSSTGRPLLLPATPPPAAQPEAAAPATAPLRVLTCPRAHSAVFYSKATFGFYFQKQIPSVSTRSVPLRTTCCRDEDTFQPTAAVNSPPLVLGHRKDAFVHHHVCACVWCMKTCLHVAF
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5535313..5535418,5536378..5536521,5539603..5539692,5541456..5542574,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5731023..5731459,5741501..5741689)
location: region:5535313-5741689:1
so has part: feature:5535313-5535418:1:exon
so has part: feature:5536378-5536521:1:exon
so has part: feature:5539603-5539692:1:exon
so has part: feature:5541456-5542574:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5731023-5731459:1:exon
so has part: feature:5741501-5741689:1:exon

XP_027385915.1
type: Protein
SIO_000068: ncbiprotein

position:5535313:1
position: 5535313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5535313-5535418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5536378-5536521:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5539603-5539692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5541456-5542574:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5553811-5553920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5578363-5578400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5580615-5580777:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5608009-5608086:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5730510-5730747:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5731023-5731459:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5741501-5741689:1:exon

MCPH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: MCPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microcephalin isoform X3
translation: MQPKDFIPRTPENDKRLQRKFEKMAKELQQQKTTLGTNVPVLSFESNGSLVYSPTGKVYRGHHSAMKKRLQEMKEKRENLSPTSSQMIEQSDDNTVNLLHEASLNLSHDTLCSDNSLAGGLPVSADNLCGGSASGTQEGKLFEFITERGSDVCAASPVLQTGSVGPSAAPCPLDLLTPHRSTSSPPKAETPQQSRAAGGVVTPISKPSKPVAQGSSDGKKRLSPVSSATKGRPGGREQHMGSSAKRKKTPENSCPGLEERRKRRRSLGQRPAPRLRLWKAERGLRSVRRPAVKSLALEEFSYDDYFSPDNLKERVSEGLLGEQLPSRPPALHCQRSLSKTERTSLLDRADLSLIGRSPRPAVSTCSTAKPALSGADAGLGGGTPGPCPRAETQGGGDVRPAGGDAPQTRSQLIPQTGPQGDRSPLKGSREETEEWTDPQSTQKEGAPPETTESAAAHSEGKPSAAGGCAEDRPAGARGAPAHGSSGSVKSGPTRHSAVAGSRKGCQDLLRLREESGKKGRGQEPTRTLVMTSMPSEKYSVVIQVVNRLKGFSLAQEVCGSTTHVLAGKPRRTLSVLLGIARGCWILSFEWVLWSLEMGHWISEEPFELSNYFPAAPLCRQERLSSAGQYRGTLFADQPTMFISPASNPPRAKLGELVMLCGGRVTQVPRQASIFIGPSPGRKKETVKYLSETWILACVQGPAGRPAPGSSAGRPLPLLATLLPAAPPDARCPCQPPCSWQLRRMPAAPAGRPAPCSSAGGCCLYRPPCSLQLRQMPTAPTSRPAPCSSTGRPLLLPATPPPAAQPEAAAPATAPLRVLTCPRAHSAVFYSKATFGFYFQKQIPSVSTRSVPLRTTCCRDEDTFQPTAAVNSPPLVLGHRKDAFVHHHVCACVWCMKTCLHVAF
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5535313..5535418,5536378..5536521,5539603..5539692,5541456..5542574,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5731023..5731459,5741501..5741689)
location: region:5535313-5741689:1
so has part: feature:5535313-5535418:1:exon
so has part: feature:5536378-5536521:1:exon
so has part: feature:5539603-5539692:1:exon
so has part: feature:5541456-5542574:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5731023-5731459:1:exon
so has part: feature:5741501-5741689:1:exon

XP_027385916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5535313-5535418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5536378-5536521:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5539603-5539692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5541456-5542574:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5553811-5553920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5578363-5578400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5580615-5580777:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5608009-5608086:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5730510-5730747:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5731023-5731459:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5741501-5741689:1:exon

MCPH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: MCPH1
product: microcephalin 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_027530117.1
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5537922..5538010,5539603..5539692,5541456..5542574,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5731023..5731459,5741501..5741845)
location: region:5537922-5741845:1
so has part: feature:5537922-5538010:1:exon
so has part: feature:5539603-5539692:1:exon
so has part: feature:5541456-5542574:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5731023-5731459:1:exon
so has part: feature:5741501-5741845:1:exon

position:5537922:1
position: 5537922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5537922-5538010:1:exon

position:5538010:1
position: 5538010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5539603-5539692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5541456-5542574:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5553811-5553920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5578363-5578400:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5580615-5580777:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5608009-5608086:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5730510-5730747:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5731023-5731459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5741501-5741845:1:exon

MCPH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: MCPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microcephalin isoform X5
translation: MIEQSDDNTVNLLHEASLNLSHDTLCSDNSLAGGLPVSADNLCGGSASGTQEGKLFEFITERGSDVCAASPVLQTGSVGPSAAPCPLDLLTPHRSTSSPPKAETPQQSRAAGGVVTPISKPSKPVAQGSSDGKKRLSPVSSATKGRPGGREQHMGSSAKRKKTPENSCPGLEERRKRRRSLGQRPAPRLRLWKAERGLRSVRRPAVKSLALEEFSYDDYFSPDNLKERVSEGLLGEQLPSRPPALHCQRSLSKTERTSLLDRADLSLIGRSPRPAVSTCSTAKPALSGADAGLGGGTPGPCPRAETQGGGDVRPAGGDAPQTRSQLIPQTGPQGDRSPLKGSREETEEWTDPQSTQKEGAPPETTESAAAHSEGKPSAAGGCAEDRPAGARGAPAHGSSGSVKSGPTRHSAVAGSRKGCQDLLRLREESGKKGRGQEPTRTLVMTSMPSEKYSVVIQVVNRLKGFSLAQEVCGSTTHVLAGKPRRTLSVLLGIARGCWILSFEWVLWSLEMGHWISEEPFELSNYFPAAPLCRQERLSSAGQYRGTLFADQPTMFISPASNPPRAKLGELVMLCGGRVTQVPRQASIFIGPSPGRKKETVKYLSETWILACVQGPAGRPAPGSSAGRPLPLLATLLPAAPPDARCPCQPPCSWQLRRMPAAPAGRPAPCSSAGGCCLYRPPCSLQLRQMPTAPTSRPAPCSSTGRPLLLPATPPPAAQPEAAAPATAPLRVLTCPRAHSAVFYSKATFGFYFQKQIPSVSTRSVPLRTTCCRDEDTFQPTAAVNSPPLVLGHRKDAFVHHHVCACVWCMKTCLHVAF
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: join(5539611..5539692,5541456..5542574,5553811..5553920,5578363..5578400,5580615..5580777,5608009..5608086,5730510..5730747,5731023..5731459,5741501..5741689)
location: region:5539611-5741689:1
so has part: feature:5539611-5539692:1:exon
so has part: feature:5541456-5542574:1:exon
so has part: feature:5553811-5553920:1:exon
so has part: feature:5578363-5578400:1:exon
so has part: feature:5580615-5580777:1:exon
so has part: feature:5608009-5608086:1:exon
so has part: feature:5730510-5730747:1:exon
so has part: feature:5731023-5731459:1:exon
so has part: feature:5741501-5741689:1:exon

XP_027385918.1
type: Protein
SIO_000068: ncbiprotein

position:5539611:1
position: 5539611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5539611-5539692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5541456-5542574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5553811-5553920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5578363-5578400:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5580615-5580777:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5608009-5608086:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5730510-5730747:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5731023-5731459:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5741501-5741689:1:exon

LOC113885010
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5569649..5573884)
location: region:5569649-5573884:-1
so has part: feature:5569649-5573884:-1:exon
subclass of: SO_0000011

113885010
type: Gene
SIO_000068: ncbigene

position:5569649:-1
position: 5569649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5573884:-1
position: 5573884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5569649-5573884:-1:exon

LOC113885010
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113885010
product: uncharacterized LOC113885010
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_003509095.1
SIO_010081: LOC113885010
subclass of: SO_0000673
so part of: LOC113885010
location: complement(join(5569649..5570137,5571875..5573884))
location: region:5569649-5573884:-1
so has part: feature:5571875-5573884:-1:exon
so has part: feature:5569649-5570137:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5571875-5573884:-1:exon

position:5571875:-1
position: 5571875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5569649-5570137:-1:exon

position:5570137:-1
position: 5570137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANGPT2
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: ANGPT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5610099..5668185)
location: region:5610099-5668185:-1
so has part: feature:5610099-5668185:-1:exon
subclass of: SO_0000010

113885009
type: Gene
SIO_000068: ncbigene

position:5610099:-1
position: 5610099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5668185:-1
position: 5668185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5610099-5668185:-1:exon

ANGPT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ANGPT2
product: angiopoietin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 20 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_027530121.1
SIO_010081: ANGPT2
subclass of: SO_0000673
so part of: ANGPT2
location: complement(join(5610099..5611220,5613984..5614114,5618823..5618989,5619758..5619859,5625402..5625529,5627638..5627870,5633996..5634117,5637517..5637672,5667343..5668185))
location: region:5610099-5668185:-1
so has part: feature:5667343-5668185:-1:exon
so has part: feature:5637517-5637672:-1:exon
so has part: feature:5633996-5634117:-1:exon
so has part: feature:5627638-5627870:-1:exon
so has part: feature:5625402-5625529:-1:exon
so has part: feature:5619758-5619859:-1:exon
so has part: feature:5618823-5618989:-1:exon
so has part: feature:5613984-5614114:-1:exon
so has part: feature:5610099-5611220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5667343-5668185:-1:exon

position:5667343:-1
position: 5667343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5637517-5637672:-1:exon

position:5637517:-1
position: 5637517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5637672:-1
position: 5637672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5633996-5634117:-1:exon

position:5633996:-1
position: 5633996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5634117:-1
position: 5634117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5627638-5627870:-1:exon

position:5627638:-1
position: 5627638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5627870:-1
position: 5627870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5625402-5625529:-1:exon

position:5625402:-1
position: 5625402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5625529:-1
position: 5625529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5619758-5619859:-1:exon

position:5619758:-1
position: 5619758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5619859:-1
position: 5619859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5618823-5618989:-1:exon

position:5618823:-1
position: 5618823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5618989:-1
position: 5618989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5613984-5614114:-1:exon

position:5613984:-1
position: 5613984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5614114:-1
position: 5614114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5610099-5611220:-1:exon

position:5611220:-1
position: 5611220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANGPT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ANGPT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiopoietin-2
translation: MWQLVFLTLSCDLAVATAHSGSRKGMDIAAGKKQYQVQHGACSYTFLLPETDHCRSPSSAYVPNAVQRDAPLDYDDSVQRLQVLENIMENNTQWLMKLENYIQDNMKKEMVEIQQNAVQNQTAVMIEIGTNLLNQTAEQTRKLTDVEAQVLNQTTRLELQLLEHSLSTNKLEKQILDQTSEISKLQDKNSFLEKKVLDMEDKHIVQLRSIKEEKDQLQVLVSKQNSIIEELEKQLVTATVNNSVLQKQQHDLMETVNNLLTLMSTSNPSYSLLAKDEQIIFRDCGEAFKSGLTTSGVYTLTFPNSTEEIKAYCDMETGGGGWTVIQRREDGSVDFQRTWKEYKVGFGNPSGEHWLGNEFVSQVTGQKRYVLKIHLRDWEGNEAYSLYDHFYLSNEELNYRIHLKGLTGTAGKISSISQPGNDFSTKDADNDKCICKCSQMLTGGWWFDACGPSNLNGMYYPQRQNTNKFNGIKWYYWKGSGYSLKATTMMIRPADF
SIO_010081: ANGPT2
subclass of: SO_0000673
so part of: ANGPT2
location: complement(join(5611060..5611220,5613984..5614114,5618823..5618989,5619758..5619859,5625402..5625529,5627638..5627870,5633996..5634117,5637517..5637672,5667343..5667633))
location: region:5611060-5667633:-1
so has part: feature:5667343-5667633:-1:exon
so has part: feature:5637517-5637672:-1:exon
so has part: feature:5633996-5634117:-1:exon
so has part: feature:5627638-5627870:-1:exon
so has part: feature:5625402-5625529:-1:exon
so has part: feature:5619758-5619859:-1:exon
so has part: feature:5618823-5618989:-1:exon
so has part: feature:5613984-5614114:-1:exon
so has part: feature:5611060-5611220:-1:exon

XP_027385922.1
type: Protein
SIO_000068: ncbiprotein

position:5611060:-1
position: 5611060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5667633:-1
position: 5667633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5667343-5667633:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5637517-5637672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5633996-5634117:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5627638-5627870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5625402-5625529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5619758-5619859:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5618823-5618989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5613984-5614114:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5611060-5611220:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5726607..5726678
location: region:5726607-5726678:1
so has part: feature:5726607-5726678:1:exon
subclass of: SO_0000663

113885136
type: Gene
SIO_000068: ncbigene

position:5726607:1
position: 5726607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5726678:1
position: 5726678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5726607-5726678:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30522
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5726640..5726642,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 5726607..5726678
location: region:5726607-5726678:1
so has part: feature:5726607-5726678:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5726607-5726678:1:exon

LOC113885011
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885011
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5728530..5729192)
location: region:5728530-5729192:-1
so has part: feature:5728530-5729192:-1:exon
subclass of: SO_0000011

113885011
type: Gene
SIO_000068: ncbigene

position:5728530:-1
position: 5728530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5729192:-1
position: 5729192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5728530-5729192:-1:exon

LOC113885011
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113885011
product: uncharacterized LOC113885011
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_003509096.1
SIO_010081: LOC113885011
subclass of: SO_0000673
so part of: LOC113885011
location: complement(join(5728530..5729020,5729111..5729192))
location: region:5728530-5729192:-1
so has part: feature:5729111-5729192:-1:exon
so has part: feature:5728530-5729020:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5729111-5729192:-1:exon

position:5729111:-1
position: 5729111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5728530-5729020:-1:exon

position:5729020:-1
position: 5729020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113885106
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885106
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5863529..5863634
location: region:5863529-5863634:1
so has part: feature:5863529-5863634:1:exon
subclass of: SO_0000623

113885106
type: Gene
SIO_000068: ncbigene

position:5863529:1
position: 5863529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5863634:1
position: 5863634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5863529-5863634:1:exon

LOC113885106
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: snRNA
gene: LOC113885106
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509147.1
SIO_010081: LOC113885106
subclass of: SO_0000673
so part of: LOC113885106
location: 5863529..5863634
location: region:5863529-5863634:1
so has part: feature:5863529-5863634:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5863529-5863634:1:exon

AGPAT5
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: AGPAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5865858..5913456
location: region:5865858-5913456:1
so has part: feature:5865858-5913456:1:exon
subclass of: SO_0000010

113884831
type: Gene
SIO_000068: ncbigene

position:5865858:1
position: 5865858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5913456:1
position: 5913456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5865858-5913456:1:exon

AGPAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: AGPAT5
product: 1-acylglycerol-3-phosphate O-acyltransferase 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 74 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 204 samples with support for all annotated introns
transcript id: XM_027529833.1
SIO_010081: AGPAT5
subclass of: SO_0000673
so part of: AGPAT5
location: join(5865858..5866173,5881385..5881454,5887924..5888039,5891382..5891471,5894243..5894333,5904041..5904202,5909757..5909880,5910888..5913456)
location: region:5865858-5913456:1
so has part: feature:5865858-5866173:1:exon
so has part: feature:5881385-5881454:1:exon
so has part: feature:5887924-5888039:1:exon
so has part: feature:5891382-5891471:1:exon
so has part: feature:5894243-5894333:1:exon
so has part: feature:5904041-5904202:1:exon
so has part: feature:5909757-5909880:1:exon
so has part: feature:5910888-5913456:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5865858-5866173:1:exon

position:5866173:1
position: 5866173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5881385-5881454:1:exon

position:5881385:1
position: 5881385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5881454:1
position: 5881454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5887924-5888039:1:exon

position:5887924:1
position: 5887924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5888039:1
position: 5888039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5891382-5891471:1:exon

position:5891382:1
position: 5891382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5891471:1
position: 5891471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5894243-5894333:1:exon

position:5894243:1
position: 5894243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5894333:1
position: 5894333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5904041-5904202:1:exon

position:5904041:1
position: 5904041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5904202:1
position: 5904202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5909757-5909880:1:exon

position:5909757:1
position: 5909757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5909880:1
position: 5909880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5910888-5913456:1:exon

position:5910888:1
position: 5910888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AGPAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: AGPAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon
translation: MLLSLVLHMHSVRCVLPAAVLLGTAPTYVLVWGAWRLLSALLPSRFYQAVDDRLYCVYQSMVLFFFENYTGVQILLYGDLPKNKENIIYLANHQSTVDWIIADILAVRQSALGHVRYVLKDGLKWLPLYGCYFSQHGGIYVKRSAKFNENQMRKKLQRYINAGTPMYLVIFPEGTRYNPELTKVISASQAFAAQEGLPVLKHVLTPRIKATHVAFDSMKDYLDAVYDVTVAFEGSVDDKGQRKEAPSMAEFLCKECPKIHIHIDRIDKKNIPEEQVSMKRWLHERFEIKDKLLIEFYDSPDPERRNKFPGESVNSKLSLKKTLPSFLILSGLTAGLLMTEAGRKLYVKTWIYGTLIGCLWVSIKA
SIO_010081: AGPAT5
subclass of: SO_0000673
so part of: AGPAT5
location: join(5865955..5866173,5881385..5881454,5887924..5888039,5891382..5891471,5894243..5894333,5904041..5904202,5909757..5909880,5910888..5911113)
location: region:5865955-5911113:1
so has part: feature:5865955-5866173:1:exon
so has part: feature:5881385-5881454:1:exon
so has part: feature:5887924-5888039:1:exon
so has part: feature:5891382-5891471:1:exon
so has part: feature:5894243-5894333:1:exon
so has part: feature:5904041-5904202:1:exon
so has part: feature:5909757-5909880:1:exon
so has part: feature:5910888-5911113:1:exon

XP_027385634.1
type: Protein
SIO_000068: ncbiprotein

position:5865955:1
position: 5865955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5911113:1
position: 5911113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5865955-5866173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5881385-5881454:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5887924-5888039:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5891382-5891471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5894243-5894333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5904041-5904202:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5909757-5909880:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5910888-5911113:1:exon

XKR5
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: XKR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5949475..5969131)
location: region:5949475-5969131:-1
so has part: feature:5949475-5969131:-1:exon
subclass of: SO_0000010

113884963
type: Gene
SIO_000068: ncbigene

position:5949475:-1
position: 5949475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5969131:-1
position: 5969131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5949475-5969131:-1:exon

XKR5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: XKR5
product: XK related 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_027530066.1
SIO_010081: XKR5
subclass of: SO_0000673
so part of: XKR5
location: complement(join(5949475..5952719,5954524..5954635,5958139..5958308,5958965..5959174,5960760..5960944,5966686..5966869,5968817..5969131))
location: region:5949475-5969131:-1
so has part: feature:5968817-5969131:-1:exon
so has part: feature:5966686-5966869:-1:exon
so has part: feature:5960760-5960944:-1:exon
so has part: feature:5958965-5959174:-1:exon
so has part: feature:5958139-5958308:-1:exon
so has part: feature:5954524-5954635:-1:exon
so has part: feature:5949475-5952719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5968817-5969131:-1:exon

position:5968817:-1
position: 5968817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5966686-5966869:-1:exon

position:5966686:-1
position: 5966686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5966869:-1
position: 5966869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5960760-5960944:-1:exon

position:5960760:-1
position: 5960760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5960944:-1
position: 5960944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5958965-5959174:-1:exon

position:5958965:-1
position: 5958965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5959174:-1
position: 5959174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5958139-5958308:-1:exon

position:5958139:-1
position: 5958139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5958308:-1
position: 5958308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5954524-5954635:-1:exon

position:5954524:-1
position: 5954524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5954635:-1
position: 5954635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5949475-5952719:-1:exon

position:5952719:-1
position: 5952719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

XKR5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: XKR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 5
translation: MHAGVLGLSALLLAAEQSARLCAVIYYFTTGRLLWAWLVLLVLLPGFLVQGLSYLWFREDGRQGGCLLVVLHLLQLGVWKRHWDAVSSSLWKEGQAVPQARLLLWEADLAALHLLEALLQVGPHLLVQTYVFLASDFTAPVPGVSALCSWTTLSWALVCYARSLRSMKPDHSSAPWTALGCQQLWRMGMVGARVLSLVLFFWAYRVWVLVVAGAHWLVMTFWLVAQQSDIVDSTCHWRLFNLLMGAVFILCYLNVWDGPSRNRMVTFYTVMLLENIILVLLATDFLQGASWTSLGAVAGVLSGFLIGSVSLVLYYSLLHPKSTDIWRGCVHTSCGPTEGNKAEEDSSPQAPGPAGEGLDSLGPCPEETSELPSLEKPPSPQWTPPEAGLESQTAGEASLLSRHHWLLVKLALKTGNVSKINAAFGEDGLARFCSPEWGLSQHHSEGRTPPPPQQEPPSSPQDPLTSEEGSEFPVVPKAEAEETSSYLSFDSQSPDRAPAQQPSAARWEGGSEEGSRAAPGARGAGGHPGGEGGQGGSTLYFSATAEGALPSPAEPTPLSGRGLGLGSSAQPATERFPLSVADISPILGPGGRLQPSGRARGGAGLRGQRESQRRPVAAGTQRPLPEVHPRPADDAPCLTSTPVHGTRRGLRPQGEADGRGFLH
SIO_010081: XKR5
subclass of: SO_0000673
so part of: XKR5
location: complement(join(5951647..5952719,5954524..5954635,5958139..5958308,5958965..5959174,5960760..5960944,5966686..5966869,5968817..5968874))
location: region:5951647-5968874:-1
so has part: feature:5968817-5968874:-1:exon
so has part: feature:5966686-5966869:-1:exon
so has part: feature:5960760-5960944:-1:exon
so has part: feature:5958965-5959174:-1:exon
so has part: feature:5958139-5958308:-1:exon
so has part: feature:5954524-5954635:-1:exon
so has part: feature:5951647-5952719:-1:exon

XP_027385867.1
type: Protein
SIO_000068: ncbiprotein

position:5951647:-1
position: 5951647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5968874:-1
position: 5968874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5968817-5968874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5966686-5966869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5960760-5960944:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5958965-5959174:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5958139-5958308:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5954524-5954635:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5951647-5952719:-1:exon

LOC113885000
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5972618..5974835)
location: region:5972618-5974835:-1
so has part: feature:5972618-5974835:-1:exon
subclass of: SO_0000010

113885000
type: Gene
SIO_000068: ncbigene

position:5972618:-1
position: 5972618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5974835:-1
position: 5974835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5972618-5974835:-1:exon

LOC113885000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885000
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027530105.1
SIO_010081: LOC113885000
subclass of: SO_0000673
so part of: LOC113885000
location: complement(5972618..5974835)
location: region:5972618-5974835:-1
so has part: feature:5972618-5974835:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5972618-5974835:-1:exon

LOC113885000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MSVYLDMGKPVTASYLLPSKQVSHPQGDPAECADLGDEVTPTSSLQYSIVPFRSKHNVSKQHGKSLSQGSFLNGQGHIHTRRKSCECALCGKVFNRCSSLSRHKMIHTGEKPFKCQLCEKVFNQRFSLKVHEKTHTGEKPYECHQCGKAFSRCASLRRHSMIHTGEKPFKCHLCGKVFNQKSSLKQHERTHTGEKRYECHQCGKAFLQSSGLSSHKKVHTGEKPHVCLECGKAFTHSSGLHVHKRIHIKEKPHVCSVCRKAFNKYAKLREHERTHSGEKPYECQLCGEHFTRASSLRRHKGTQHRRENQ
SIO_010081: LOC113885000
subclass of: SO_0000673
so part of: LOC113885000
location: complement(5973627..5974556)
location: region:5973627-5974556:-1
so has part: feature:5973627-5974556:-1:exon

XP_027385906.1
type: Protein
SIO_000068: ncbiprotein

position:5973627:-1
position: 5973627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5974556:-1
position: 5974556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5973627-5974556:-1:exon

LOC113885001
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885001
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5974859..5978320)
location: region:5974859-5978320:-1
so has part: feature:5974859-5978320:-1:exon
subclass of: SO_0000010

113885001
type: Gene
SIO_000068: ncbigene

position:5974859:-1
position: 5974859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5978320:-1
position: 5978320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5974859-5978320:-1:exon

LOC113885001
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885001
product: putative zinc finger protein 705B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027530106.1
SIO_010081: LOC113885001
subclass of: SO_0000673
so part of: LOC113885001
location: complement(join(5974859..5975024,5975651..5975746,5976472..5976598,5976719..5978320))
location: region:5974859-5978320:-1
so has part: feature:5976719-5978320:-1:exon
so has part: feature:5976472-5976598:-1:exon
so has part: feature:5975651-5975746:-1:exon
so has part: feature:5974859-5975024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5976719-5978320:-1:exon

position:5976719:-1
position: 5976719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5976472-5976598:-1:exon

position:5976472:-1
position: 5976472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5976598:-1
position: 5976598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5975651-5975746:-1:exon

position:5975651:-1
position: 5975651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5975746:-1
position: 5975746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5974859-5975024:-1:exon

position:5975024:-1
position: 5975024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113885001
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885001
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative zinc finger protein 705B
translation: MEPLESVTFGDVAIDFTQEEWSLLDKSQKNLFRNVMLETVTHLVSVGYQISKSDVVFQLEQGKELWTQAAGGLQGQSPGSESLFRQQEVTLMQSVYWKHTSPVRTMVRFMGEKPRQQLNDLVMR
SIO_010081: LOC113885001
subclass of: SO_0000673
so part of: LOC113885001
location: complement(join(5974885..5975024,5975651..5975746,5976472..5976598,5976719..5976730))
location: region:5974885-5976730:-1
so has part: feature:5976719-5976730:-1:exon
so has part: feature:5976472-5976598:-1:exon
so has part: feature:5975651-5975746:-1:exon
so has part: feature:5974885-5975024:-1:exon

XP_027385907.1
type: Protein
SIO_000068: ncbiprotein

position:5974885:-1
position: 5974885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5976730:-1
position: 5976730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5976719-5976730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5976472-5976598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5975651-5975746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5974885-5975024:-1:exon

LOC113884789
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5994103..5997092)
location: region:5994103-5997092:-1
so has part: feature:5994103-5997092:-1:exon

113884789
type: Gene
SIO_000068: ncbigene

position:5994103:-1
position: 5994103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5997092:-1
position: 5997092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5994103-5997092:-1:exon

LOC113884789
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884789
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113884789
subclass of: SO_0000673
so part of: LOC113884789
location: complement(5994103..5994464)
location: region:5994103-5994464:-1
so has part: feature:5994103-5994464:-1:exon

position:5994464:-1
position: 5994464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5994103-5994464:-1:exon

LOC113884789
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884789
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113884789
subclass of: SO_0000673
so part of: LOC113884789
location: complement(5994534..5994981)
location: region:5994534-5994981:-1
so has part: feature:5994534-5994981:-1:exon

position:5994534:-1
position: 5994534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5994981:-1
position: 5994981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5994534-5994981:-1:exon

LOC113884789
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884789
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113884789
subclass of: SO_0000673
so part of: LOC113884789
location: complement(5995948..5996120)
location: region:5995948-5996120:-1
so has part: feature:5995948-5996120:-1:exon

position:5995948:-1
position: 5995948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5996120:-1
position: 5996120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5995948-5996120:-1:exon

LOC113884789
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884789
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113884789
subclass of: SO_0000673
so part of: LOC113884789
location: complement(5996834..5996960)
location: region:5996834-5996960:-1
so has part: feature:5996834-5996960:-1:exon

position:5996834:-1
position: 5996834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5996960:-1
position: 5996960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5996834-5996960:-1:exon

LOC113884789
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884789
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113884789
subclass of: SO_0000673
so part of: LOC113884789
location: complement(5997081..5997092)
location: region:5997081-5997092:-1
so has part: feature:5997081-5997092:-1:exon

position:5997081:-1
position: 5997081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5997081-5997092:-1:exon

LOC113884790
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5998613..6019005
location: region:5998613-6019005:1
so has part: feature:5998613-6019005:1:exon

113884790
type: Gene
SIO_000068: ncbigene

position:5998613:1
position: 5998613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6019005:1
position: 6019005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5998613-6019005:1:exon

LOC113884790
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884790
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113884790
subclass of: SO_0000673
so part of: LOC113884790
location: 5998613..5998646
location: region:5998613-5998646:1
so has part: feature:5998613-5998646:1:exon

position:5998646:1
position: 5998646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5998613-5998646:1:exon

LOC113884790
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884790
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113884790
subclass of: SO_0000673
so part of: LOC113884790
location: 6007838..6008573
location: region:6007838-6008573:1
so has part: feature:6007838-6008573:1:exon

position:6007838:1
position: 6007838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6008573:1
position: 6008573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6007838-6008573:1:exon

LOC113884790
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884790
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113884790
subclass of: SO_0000673
so part of: LOC113884790
location: 6018664..6019005
location: region:6018664-6019005:1
so has part: feature:6018664-6019005:1:exon

position:6018664:1
position: 6018664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6018664-6019005:1:exon

DEFB1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: DEFB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6024064..6034355)
location: region:6024064-6034355:-1
so has part: feature:6024064-6034355:-1:exon
subclass of: SO_0000010

113884791
type: Gene
SIO_000068: ncbigene

position:6024064:-1
position: 6024064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6034355:-1
position: 6034355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6024064-6034355:-1:exon

DEFB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: DEFB1
product: defensin beta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_027529734.1
SIO_010081: DEFB1
subclass of: SO_0000673
so part of: DEFB1
location: complement(join(6024064..6024212,6031829..6032525,6033064..6033169,6033597..6033793,6034302..6034355))
location: region:6024064-6034355:-1
so has part: feature:6034302-6034355:-1:exon
so has part: feature:6033597-6033793:-1:exon
so has part: feature:6033064-6033169:-1:exon
so has part: feature:6031829-6032525:-1:exon
so has part: feature:6024064-6024212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6034302-6034355:-1:exon

position:6034302:-1
position: 6034302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6033597-6033793:-1:exon

position:6033597:-1
position: 6033597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6033793:-1
position: 6033793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6033064-6033169:-1:exon

position:6033064:-1
position: 6033064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6033169:-1
position: 6033169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6031829-6032525:-1:exon

position:6031829:-1
position: 6031829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6032525:-1
position: 6032525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6024064-6024212:-1:exon

position:6024212:-1
position: 6024212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DEFB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: DEFB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-defensin 1
translation: MAGHYGWLTACQLFQDQKVKCKDCGAFGHTARSLRCPMKRWQGALVPLPLGSRFGKENLAWKLQDPPTPGTPNTAEREEEERQRKEEQQRKLLQRFPRRPRGRQPQSWKEEPEPGLCLRHPNMPLLIHTSKRKSFQDPKSRGSPTRRDDVKSSLPTVPLIGRNLAPASKGRIEAPGKRCGQTPSLTCVNLPKKPRLSPVQTPQQSTPTADLGAFLNLPPPPSTAGRGPRVAARVSRETPAQGQCLDLQPPADRSPSRSVGTVSAAHLLPIIHVPAQPLRMLFLRDGEGCWSCQYTAPLSPRPAEQPAPPAQSPSVDQEPDGHAVPGPRSVLYDDLQVSSSSEESDWDKDSSGAGQLTALGQQSDSYICARKGGTCNLSPCPLYNRIEGTCYRGKAKCCIR
SIO_010081: DEFB1
subclass of: SO_0000673
so part of: DEFB1
location: complement(join(6024064..6024212,6031829..6032525,6033064..6033169,6033597..6033793,6034302..6034355))
location: region:6024064-6034355:-1
so has part: feature:6034302-6034355:-1:exon
so has part: feature:6033597-6033793:-1:exon
so has part: feature:6033064-6033169:-1:exon
so has part: feature:6031829-6032525:-1:exon
so has part: feature:6024064-6024212:-1:exon

XP_027385535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6034302-6034355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6033597-6033793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6033064-6033169:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6031829-6032525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6024064-6024212:-1:exon

LOC113884917
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6044536..6047503)
location: region:6044536-6047503:-1
so has part: feature:6044536-6047503:-1:exon

113884917
type: Gene
SIO_000068: ncbigene

position:6044536:-1
position: 6044536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6047503:-1
position: 6047503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6044536-6047503:-1:exon

LOC113884917
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884917
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC113884917
subclass of: SO_0000673
so part of: LOC113884917
location: complement(6044536..6046238)
location: region:6044536-6046238:-1
so has part: feature:6044536-6046238:-1:exon

position:6046238:-1
position: 6046238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6044536-6046238:-1:exon

LOC113884917
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884917
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC113884917
subclass of: SO_0000673
so part of: LOC113884917
location: complement(6046680..6046762)
location: region:6046680-6046762:-1
so has part: feature:6046680-6046762:-1:exon

position:6046680:-1
position: 6046680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6046762:-1
position: 6046762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6046680-6046762:-1:exon

LOC113884917
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884917
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC113884917
subclass of: SO_0000673
so part of: LOC113884917
location: complement(6047291..6047503)
location: region:6047291-6047503:-1
so has part: feature:6047291-6047503:-1:exon

position:6047291:-1
position: 6047291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6047291-6047503:-1:exon

LOC113884975
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6063942..6072066)
location: region:6063942-6072066:-1
so has part: feature:6063942-6072066:-1:exon
subclass of: SO_0000011

113884975
type: Gene
SIO_000068: ncbigene

position:6063942:-1
position: 6063942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6072066:-1
position: 6072066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6063942-6072066:-1:exon

LOC113884975
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884975
product: uncharacterized LOC113884975
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 142 samples with support for all annotated introns
transcript id: XR_003509077.1
SIO_010081: LOC113884975
subclass of: SO_0000673
so part of: LOC113884975
location: complement(join(6063942..6064197,6071568..6072066))
location: region:6063942-6072066:-1
so has part: feature:6071568-6072066:-1:exon
so has part: feature:6063942-6064197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6071568-6072066:-1:exon

position:6071568:-1
position: 6071568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6063942-6064197:-1:exon

position:6064197:-1
position: 6064197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113884960
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884960
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6117262..6119214)
location: region:6117262-6119214:-1
so has part: feature:6117262-6119214:-1:exon
subclass of: SO_0000011

113884960
type: Gene
SIO_000068: ncbigene

position:6117262:-1
position: 6117262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6119214:-1
position: 6119214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6117262-6119214:-1:exon

LOC113884960
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884960
product: uncharacterized LOC113884960
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XR_003509066.1
SIO_010081: LOC113884960
subclass of: SO_0000673
so part of: LOC113884960
location: complement(join(6117262..6117503,6119023..6119214))
location: region:6117262-6119214:-1
so has part: feature:6119023-6119214:-1:exon
so has part: feature:6117262-6117503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6119023-6119214:-1:exon

position:6119023:-1
position: 6119023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6117262-6117503:-1:exon

position:6117503:-1
position: 6117503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113884989
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6131583..6132765)
location: region:6131583-6132765:-1
so has part: feature:6131583-6132765:-1:exon
subclass of: SO_0000010

113884989
type: Gene
SIO_000068: ncbigene

position:6131583:-1
position: 6131583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6132765:-1
position: 6132765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6131583-6132765:-1:exon

LOC113884989
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884989
product: beta-defensin 103A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_027530097.1
SIO_010081: LOC113884989
subclass of: SO_0000673
so part of: LOC113884989
location: complement(join(6131583..6131942,6132603..6132765))
location: region:6131583-6132765:-1
so has part: feature:6132603-6132765:-1:exon
so has part: feature:6131583-6131942:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6132603-6132765:-1:exon

position:6132603:-1
position: 6132603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6131583-6131942:-1:exon

position:6131942:-1
position: 6131942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113884989
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-defensin 103A
translation: MRLYYLLFALLFLFLLPVPGNGGIISGLQRYYCKIRSGRCALIGCLPKEEQIGRCSLSGRKCCRKKK
SIO_010081: LOC113884989
subclass of: SO_0000673
so part of: LOC113884989
location: complement(join(6131797..6131942,6132603..6132660))
location: region:6131797-6132660:-1
so has part: feature:6132603-6132660:-1:exon
so has part: feature:6131797-6131942:-1:exon

XP_027385898.1
type: Protein
SIO_000068: ncbiprotein

position:6131797:-1
position: 6131797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6132660:-1
position: 6132660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6132603-6132660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6131797-6131942:-1:exon

LOC113884827
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6189413..6191955
location: region:6189413-6191955:1
so has part: feature:6189413-6191955:1:exon
subclass of: SO_0000010

113884827
type: Gene
SIO_000068: ncbigene

position:6189413:1
position: 6189413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6191955:1
position: 6191955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6189413-6191955:1:exon

LOC113884827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884827
product: beta-defensin 105-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_027529831.1
SIO_010081: LOC113884827
subclass of: SO_0000673
so part of: LOC113884827
location: join(6189413..6190033,6190372..6190413,6191595..6191955)
location: region:6189413-6191955:1
so has part: feature:6189413-6190033:1:exon
so has part: feature:6190372-6190413:1:exon
so has part: feature:6191595-6191955:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6189413-6190033:1:exon

position:6190033:1
position: 6190033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6190372-6190413:1:exon

position:6190372:1
position: 6190372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6190413:1
position: 6190413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6191595-6191955:1:exon

position:6191595:1
position: 6191595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-defensin 105-like
translation: MAPSRKMFYFVLAFFFMLAQFPSGCQAGLQYSQPLSAGDVSPCELCWLGRGKCRKICTEDEKIVGNCKVNFFCCRRRIL
SIO_010081: LOC113884827
subclass of: SO_0000673
so part of: LOC113884827
location: join(6189964..6190033,6190372..6190413,6191595..6191722)
location: region:6189964-6191722:1
so has part: feature:6189964-6190033:1:exon
so has part: feature:6190372-6190413:1:exon
so has part: feature:6191595-6191722:1:exon

XP_027385632.1
type: Protein
SIO_000068: ncbiprotein

position:6189964:1
position: 6189964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6191722:1
position: 6191722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6189964-6190033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6190372-6190413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6191595-6191722:1:exon

LOC113884829
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6197720..6202614
location: region:6197720-6202614:1
so has part: feature:6197720-6202614:1:exon
subclass of: SO_0000010

113884829
type: Gene
SIO_000068: ncbigene

position:6197720:1
position: 6197720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6202614:1
position: 6202614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6197720-6202614:1:exon

LOC113884829
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884829
product: beta-defensin 107A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027529832.1
SIO_010081: LOC113884829
subclass of: SO_0000673
so part of: LOC113884829
location: join(6197720..6198746,6202418..6202614)
location: region:6197720-6202614:1
so has part: feature:6197720-6198746:1:exon
so has part: feature:6202418-6202614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6197720-6198746:1:exon

position:6198746:1
position: 6198746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6202418-6202614:1:exon

position:6202418:1
position: 6202418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884829
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-defensin 107A-like
translation: MPGAMKTFFLMFAAMILLAQIFSAPRSLKRQIHCLKMDGRCEVECLSFEDKIGGCRAELTPFCCRKRVNN
SIO_010081: LOC113884829
subclass of: SO_0000673
so part of: LOC113884829
location: join(6198677..6198746,6202418..6202560)
location: region:6198677-6202560:1
so has part: feature:6198677-6198746:1:exon
so has part: feature:6202418-6202560:1:exon

XP_027385633.1
type: Protein
SIO_000068: ncbiprotein

position:6198677:1
position: 6198677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6202560:1
position: 6202560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6198677-6198746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6202418-6202560:1:exon

LOC113884830
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6200842..6215593)
location: region:6200842-6215593:-1
so has part: feature:6200842-6215593:-1:exon
subclass of: SO_0000011

113884830
type: Gene
SIO_000068: ncbigene

position:6200842:-1
position: 6200842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6215593:-1
position: 6215593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6200842-6215593:-1:exon

LOC113884830
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884830
product: uncharacterized LOC113884830
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XR_003509023.1
SIO_010081: LOC113884830
subclass of: SO_0000673
so part of: LOC113884830
location: complement(join(6200842..6201015,6214540..6214700,6215483..6215593))
location: region:6200842-6215593:-1
so has part: feature:6215483-6215593:-1:exon
so has part: feature:6214540-6214700:-1:exon
so has part: feature:6200842-6201015:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6215483-6215593:-1:exon

position:6215483:-1
position: 6215483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6214540-6214700:-1:exon

position:6214540:-1
position: 6214540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6214700:-1
position: 6214700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6200842-6201015:-1:exon

position:6201015:-1
position: 6201015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113884826
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6215653..6233326
location: region:6215653-6233326:1
so has part: feature:6215653-6233326:1:exon
subclass of: SO_0000010

113884826
type: Gene
SIO_000068: ncbigene

position:6215653:1
position: 6215653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6233326:1
position: 6233326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6215653-6233326:1:exon

LOC113884826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884826
product: zinc finger protein 596-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 176 samples with support for all annotated introns
transcript id: XM_027529830.1
SIO_010081: LOC113884826
subclass of: SO_0000673
so part of: LOC113884826
location: join(6215653..6215721,6219388..6219546,6224677..6224953,6225215..6225285,6227625..6227711,6229771..6229897,6230607..6230702,6231169..6231248,6231701..6233326)
location: region:6215653-6233326:1
so has part: feature:6215653-6215721:1:exon
so has part: feature:6219388-6219546:1:exon
so has part: feature:6224677-6224953:1:exon
so has part: feature:6225215-6225285:1:exon
so has part: feature:6227625-6227711:1:exon
so has part: feature:6229771-6229897:1:exon
so has part: feature:6230607-6230702:1:exon
so has part: feature:6231169-6231248:1:exon
so has part: feature:6231701-6233326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6215653-6215721:1:exon

position:6215721:1
position: 6215721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6219388-6219546:1:exon

position:6219388:1
position: 6219388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6219546:1
position: 6219546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6224677-6224953:1:exon

position:6224677:1
position: 6224677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6224953:1
position: 6224953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6225215-6225285:1:exon

position:6225215:1
position: 6225215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6225285:1
position: 6225285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6227625-6227711:1:exon

position:6227625:1
position: 6227625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6227711:1
position: 6227711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6229771-6229897:1:exon

position:6229771:1
position: 6229771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6229897:1
position: 6229897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6230607-6230702:1:exon

position:6230607:1
position: 6230607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6230702:1
position: 6230702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6231169-6231248:1:exon

position:6231169:1
position: 6231169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6231248:1
position: 6231248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6231701-6233326:1:exon

position:6231701:1
position: 6231701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884826
product: zinc finger protein 596-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_027529826.1
SIO_010081: LOC113884826
subclass of: SO_0000673
so part of: LOC113884826
location: join(6215655..6215721,6219388..6219546,6219752..6220080,6224677..6224953,6225215..6225285,6227625..6227711,6229771..6229897,6230607..6230702,6231169..6231248,6231698..6232779)
location: region:6215655-6232779:1
so has part: feature:6215655-6215721:1:exon
so has part: feature:6219388-6219546:1:exon
so has part: feature:6219752-6220080:1:exon
so has part: feature:6224677-6224953:1:exon
so has part: feature:6225215-6225285:1:exon
so has part: feature:6227625-6227711:1:exon
so has part: feature:6229771-6229897:1:exon
so has part: feature:6230607-6230702:1:exon
so has part: feature:6231169-6231248:1:exon
so has part: feature:6231698-6232779:1:exon

position:6215655:1
position: 6215655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6232779:1
position: 6232779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6215655-6215721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6219388-6219546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6219752-6220080:1:exon

position:6219752:1
position: 6219752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6220080:1
position: 6220080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6224677-6224953:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6225215-6225285:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6227625-6227711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6229771-6229897:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6230607-6230702:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6231169-6231248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6231698-6232779:1:exon

position:6231698:1
position: 6231698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884826
product: zinc finger protein 596-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_027529827.1
SIO_010081: LOC113884826
subclass of: SO_0000673
so part of: LOC113884826
location: join(6215655..6215721,6219388..6219546,6224677..6224953,6225215..6225285,6226397..6226406,6227625..6227711,6229771..6229897,6230607..6230702,6231169..6231248,6231698..6232779)
location: region:6215655-6232779:1
so has part: feature:6215655-6215721:1:exon
so has part: feature:6219388-6219546:1:exon
so has part: feature:6224677-6224953:1:exon
so has part: feature:6225215-6225285:1:exon
so has part: feature:6226397-6226406:1:exon
so has part: feature:6227625-6227711:1:exon
so has part: feature:6229771-6229897:1:exon
so has part: feature:6230607-6230702:1:exon
so has part: feature:6231169-6231248:1:exon
so has part: feature:6231698-6232779:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6215655-6215721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6219388-6219546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6224677-6224953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6225215-6225285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6226397-6226406:1:exon

position:6226397:1
position: 6226397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6226406:1
position: 6226406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6227625-6227711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6229771-6229897:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6230607-6230702:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6231169-6231248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6231698-6232779:1:exon

LOC113884826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884826
product: zinc finger protein 596-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 159 samples with support for all annotated introns
transcript id: XM_027529824.1
SIO_010081: LOC113884826
subclass of: SO_0000673
so part of: LOC113884826
location: join(6215655..6215721,6219388..6219546,6224677..6224953,6225215..6225285,6227625..6227711,6229771..6229897,6230607..6230702,6231169..6231248,6231698..6232779)
location: region:6215655-6232779:1
so has part: feature:6215655-6215721:1:exon
so has part: feature:6219388-6219546:1:exon
so has part: feature:6224677-6224953:1:exon
so has part: feature:6225215-6225285:1:exon
so has part: feature:6227625-6227711:1:exon
so has part: feature:6229771-6229897:1:exon
so has part: feature:6230607-6230702:1:exon
so has part: feature:6231169-6231248:1:exon
so has part: feature:6231698-6232779:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6215655-6215721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6219388-6219546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6224677-6224953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6225215-6225285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6227625-6227711:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6229771-6229897:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6230607-6230702:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6231169-6231248:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6231698-6232779:1:exon

LOC113884826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884826
product: zinc finger protein 596-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_027529828.1
SIO_010081: LOC113884826
subclass of: SO_0000673
so part of: LOC113884826
location: join(6215655..6215721,6219388..6219546,6224855..6224953,6225215..6225285,6227625..6227711,6229771..6229897,6230607..6230702,6231169..6231248,6231698..6232779)
location: region:6215655-6232779:1
so has part: feature:6215655-6215721:1:exon
so has part: feature:6219388-6219546:1:exon
so has part: feature:6224855-6224953:1:exon
so has part: feature:6225215-6225285:1:exon
so has part: feature:6227625-6227711:1:exon
so has part: feature:6229771-6229897:1:exon
so has part: feature:6230607-6230702:1:exon
so has part: feature:6231169-6231248:1:exon
so has part: feature:6231698-6232779:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6215655-6215721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6219388-6219546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6224855-6224953:1:exon

position:6224855:1
position: 6224855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6225215-6225285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6227625-6227711:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6229771-6229897:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6230607-6230702:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6231169-6231248:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6231698-6232779:1:exon

LOC113884826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884826
product: zinc finger protein 596-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
transcript id: XM_027529829.1
SIO_010081: LOC113884826
subclass of: SO_0000673
so part of: LOC113884826
location: join(6215655..6215721,6219388..6219546,6225215..6225285,6227625..6227711,6229771..6229897,6230607..6230702,6231169..6231248,6231698..6232779)
location: region:6215655-6232779:1
so has part: feature:6215655-6215721:1:exon
so has part: feature:6219388-6219546:1:exon
so has part: feature:6225215-6225285:1:exon
so has part: feature:6227625-6227711:1:exon
so has part: feature:6229771-6229897:1:exon
so has part: feature:6230607-6230702:1:exon
so has part: feature:6231169-6231248:1:exon
so has part: feature:6231698-6232779:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6215655-6215721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6219388-6219546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6225215-6225285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6227625-6227711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6229771-6229897:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6230607-6230702:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6231169-6231248:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6231698-6232779:1:exon

LOC113884826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884826
product: zinc finger protein 596-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 161 samples with support for all annotated introns
transcript id: XM_027529825.1
SIO_010081: LOC113884826
subclass of: SO_0000673
so part of: LOC113884826
location: join(6215686..6215881,6219388..6219546,6224677..6224953,6225215..6225285,6227625..6227711,6229771..6229897,6230607..6230702,6231169..6231248,6231698..6232779)
location: region:6215686-6232779:1
so has part: feature:6215686-6215881:1:exon
so has part: feature:6219388-6219546:1:exon
so has part: feature:6224677-6224953:1:exon
so has part: feature:6225215-6225285:1:exon
so has part: feature:6227625-6227711:1:exon
so has part: feature:6229771-6229897:1:exon
so has part: feature:6230607-6230702:1:exon
so has part: feature:6231169-6231248:1:exon
so has part: feature:6231698-6232779:1:exon

position:6215686:1
position: 6215686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6215686-6215881:1:exon

position:6215881:1
position: 6215881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6219388-6219546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6224677-6224953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6225215-6225285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6227625-6227711:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6229771-6229897:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6230607-6230702:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6231169-6231248:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6231698-6232779:1:exon

LOC113884826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 596-like isoform X1
translation: MQPLESVTFEDVAVDFTQEEWALLDTSQRKLFRDVMLENISHLVFVGYQHCKLDVIFQLEQGEELWIEGRGFFQSHSPGRESAFKEELLATQHISKKDTSTIIPMQTFHTPEDPCECNDLGEDFSPSSTLSQHLLTHTEKTPNISKQYQKSQSDQSYLNPHKQIHSRGKSCECHLCGKAFSNCSSLRRHEMTHTGEKPYECHICGNAFIQSSDLRKHNLTHTGEKPYECHLCGKAFSQSSNLRQHERTHTGEQPYECQLCGKTFSKCSALRRHERTHTGEKPYECHLCGKAFSQCSALRRHEGTHNGEKIMNVFSKYSDLR
SIO_010081: LOC113884826
subclass of: SO_0000673
so part of: LOC113884826
location: join(6227700..6227711,6229771..6229897,6230607..6230702,6231169..6231248,6231698..6232348)
location: region:6227700-6232348:1
so has part: feature:6227700-6227711:1:exon
so has part: feature:6229771-6229897:1:exon
so has part: feature:6230607-6230702:1:exon
so has part: feature:6231169-6231248:1:exon
so has part: feature:6231698-6232348:1:exon

XP_027385625.1
type: Protein
SIO_000068: ncbiprotein

position:6227700:1
position: 6227700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6232348:1
position: 6232348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6227700-6227711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6229771-6229897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6230607-6230702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6231169-6231248:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6231698-6232348:1:exon

LOC113884826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 596-like isoform X1
translation: MQPLESVTFEDVAVDFTQEEWALLDTSQRKLFRDVMLENISHLVFVGYQHCKLDVIFQLEQGEELWIEGRGFFQSHSPGRESAFKEELLATQHISKKDTSTIIPMQTFHTPEDPCECNDLGEDFSPSSTLSQHLLTHTEKTPNISKQYQKSQSDQSYLNPHKQIHSRGKSCECHLCGKAFSNCSSLRRHEMTHTGEKPYECHICGNAFIQSSDLRKHNLTHTGEKPYECHLCGKAFSQSSNLRQHERTHTGEQPYECQLCGKTFSKCSALRRHERTHTGEKPYECHLCGKAFSQCSALRRHEGTHNGEKIMNVFSKYSDLR
SIO_010081: LOC113884826
subclass of: SO_0000673
so part of: LOC113884826
location: join(6227700..6227711,6229771..6229897,6230607..6230702,6231169..6231248,6231698..6232348)
location: region:6227700-6232348:1
so has part: feature:6227700-6227711:1:exon
so has part: feature:6229771-6229897:1:exon
so has part: feature:6230607-6230702:1:exon
so has part: feature:6231169-6231248:1:exon
so has part: feature:6231698-6232348:1:exon

XP_027385626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6227700-6227711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6229771-6229897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6230607-6230702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6231169-6231248:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6231698-6232348:1:exon

LOC113884826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 596-like isoform X1
translation: MQPLESVTFEDVAVDFTQEEWALLDTSQRKLFRDVMLENISHLVFVGYQHCKLDVIFQLEQGEELWIEGRGFFQSHSPGRESAFKEELLATQHISKKDTSTIIPMQTFHTPEDPCECNDLGEDFSPSSTLSQHLLTHTEKTPNISKQYQKSQSDQSYLNPHKQIHSRGKSCECHLCGKAFSNCSSLRRHEMTHTGEKPYECHICGNAFIQSSDLRKHNLTHTGEKPYECHLCGKAFSQSSNLRQHERTHTGEQPYECQLCGKTFSKCSALRRHERTHTGEKPYECHLCGKAFSQCSALRRHEGTHNGEKIMNVFSKYSDLR
SIO_010081: LOC113884826
subclass of: SO_0000673
so part of: LOC113884826
location: join(6227700..6227711,6229771..6229897,6230607..6230702,6231169..6231248,6231698..6232348)
location: region:6227700-6232348:1
so has part: feature:6227700-6227711:1:exon
so has part: feature:6229771-6229897:1:exon
so has part: feature:6230607-6230702:1:exon
so has part: feature:6231169-6231248:1:exon
so has part: feature:6231698-6232348:1:exon

XP_027385627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6227700-6227711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6229771-6229897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6230607-6230702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6231169-6231248:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6231698-6232348:1:exon

LOC113884826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 596-like isoform X1
translation: MQPLESVTFEDVAVDFTQEEWALLDTSQRKLFRDVMLENISHLVFVGYQHCKLDVIFQLEQGEELWIEGRGFFQSHSPGRESAFKEELLATQHISKKDTSTIIPMQTFHTPEDPCECNDLGEDFSPSSTLSQHLLTHTEKTPNISKQYQKSQSDQSYLNPHKQIHSRGKSCECHLCGKAFSNCSSLRRHEMTHTGEKPYECHICGNAFIQSSDLRKHNLTHTGEKPYECHLCGKAFSQSSNLRQHERTHTGEQPYECQLCGKTFSKCSALRRHERTHTGEKPYECHLCGKAFSQCSALRRHEGTHNGEKIMNVFSKYSDLR
SIO_010081: LOC113884826
subclass of: SO_0000673
so part of: LOC113884826
location: join(6227700..6227711,6229771..6229897,6230607..6230702,6231169..6231248,6231698..6232348)
location: region:6227700-6232348:1
so has part: feature:6227700-6227711:1:exon
so has part: feature:6229771-6229897:1:exon
so has part: feature:6230607-6230702:1:exon
so has part: feature:6231169-6231248:1:exon
so has part: feature:6231698-6232348:1:exon

XP_027385628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6227700-6227711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6229771-6229897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6230607-6230702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6231169-6231248:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6231698-6232348:1:exon

LOC113884826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 596-like isoform X1
translation: MQPLESVTFEDVAVDFTQEEWALLDTSQRKLFRDVMLENISHLVFVGYQHCKLDVIFQLEQGEELWIEGRGFFQSHSPGRESAFKEELLATQHISKKDTSTIIPMQTFHTPEDPCECNDLGEDFSPSSTLSQHLLTHTEKTPNISKQYQKSQSDQSYLNPHKQIHSRGKSCECHLCGKAFSNCSSLRRHEMTHTGEKPYECHICGNAFIQSSDLRKHNLTHTGEKPYECHLCGKAFSQSSNLRQHERTHTGEQPYECQLCGKTFSKCSALRRHERTHTGEKPYECHLCGKAFSQCSALRRHEGTHNGEKIMNVFSKYSDLR
SIO_010081: LOC113884826
subclass of: SO_0000673
so part of: LOC113884826
location: join(6227700..6227711,6229771..6229897,6230607..6230702,6231169..6231248,6231698..6232348)
location: region:6227700-6232348:1
so has part: feature:6227700-6227711:1:exon
so has part: feature:6229771-6229897:1:exon
so has part: feature:6230607-6230702:1:exon
so has part: feature:6231169-6231248:1:exon
so has part: feature:6231698-6232348:1:exon

XP_027385629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6227700-6227711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6229771-6229897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6230607-6230702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6231169-6231248:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6231698-6232348:1:exon

LOC113884826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 596-like isoform X1
translation: MQPLESVTFEDVAVDFTQEEWALLDTSQRKLFRDVMLENISHLVFVGYQHCKLDVIFQLEQGEELWIEGRGFFQSHSPGRESAFKEELLATQHISKKDTSTIIPMQTFHTPEDPCECNDLGEDFSPSSTLSQHLLTHTEKTPNISKQYQKSQSDQSYLNPHKQIHSRGKSCECHLCGKAFSNCSSLRRHEMTHTGEKPYECHICGNAFIQSSDLRKHNLTHTGEKPYECHLCGKAFSQSSNLRQHERTHTGEQPYECQLCGKTFSKCSALRRHERTHTGEKPYECHLCGKAFSQCSALRRHEGTHNGEKIMNVFSKYSDLR
SIO_010081: LOC113884826
subclass of: SO_0000673
so part of: LOC113884826
location: join(6227700..6227711,6229771..6229897,6230607..6230702,6231169..6231248,6231698..6232348)
location: region:6227700-6232348:1
so has part: feature:6227700-6227711:1:exon
so has part: feature:6229771-6229897:1:exon
so has part: feature:6230607-6230702:1:exon
so has part: feature:6231169-6231248:1:exon
so has part: feature:6231698-6232348:1:exon

XP_027385630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6227700-6227711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6229771-6229897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6230607-6230702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6231169-6231248:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6231698-6232348:1:exon

LOC113884826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 596-like isoform X2
translation: MQPLESVTFEDVAVDFTQEEWALLDTSQRKLFRDVMLENISHLVFVGYQHCKLDVIFQLEQGEELWIEGRGFFQSHSPGRESAFKEELLATQHISKKDTSTIIPMTFHTPEDPCECNDLGEDFSPSSTLSQHLLTHTEKTPNISKQYQKSQSDQSYLNPHKQIHSRGKSCECHLCGKAFSNCSSLRRHEMTHTGEKPYECHICGNAFIQSSDLRKHNLTHTGEKPYECHLCGKAFSQSSNLRQHERTHTGEQPYECQLCGKTFSKCSALRRHERTHTGEKPYECHLCGKAFSQCSALRRHEGTHNGEKIMNVFSKYSDLR
SIO_010081: LOC113884826
subclass of: SO_0000673
so part of: LOC113884826
location: join(6227700..6227711,6229771..6229897,6230607..6230702,6231169..6231248,6231701..6232348)
location: region:6227700-6232348:1
so has part: feature:6227700-6227711:1:exon
so has part: feature:6229771-6229897:1:exon
so has part: feature:6230607-6230702:1:exon
so has part: feature:6231169-6231248:1:exon
so has part: feature:6231701-6232348:1:exon

XP_027385631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6227700-6227711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6229771-6229897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6230607-6230702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6231169-6231248:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6231701-6232348:1:exon

LOC113885034
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6288025..6290535
location: region:6288025-6290535:1
so has part: feature:6288025-6290535:1:exon

113885034
type: Gene
SIO_000068: ncbigene

position:6288025:1
position: 6288025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6290535:1
position: 6290535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6288025-6290535:1:exon

LOC113885034
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885034
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113885034
subclass of: SO_0000673
so part of: LOC113885034
location: 6288025..6290535
location: region:6288025-6290535:1
so has part: feature:6288025-6290535:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6288025-6290535:1:exon

LOC113884794
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884794
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6307329..6311924
location: region:6307329-6311924:1
so has part: feature:6307329-6311924:1:exon
subclass of: SO_0000010

113884794
type: Gene
SIO_000068: ncbigene

position:6307329:1
position: 6307329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6311924:1
position: 6311924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6307329-6311924:1:exon

LOC113884794
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884794
product: beta-defensin 109-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_027529744.1
SIO_010081: LOC113884794
subclass of: SO_0000673
so part of: LOC113884794
location: join(6307329..6307383,6311719..6311924)
location: region:6307329-6311924:1
so has part: feature:6307329-6307383:1:exon
so has part: feature:6311719-6311924:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6307329-6307383:1:exon

position:6307383:1
position: 6307383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6311719-6311924:1:exon

position:6311719:1
position: 6311719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884794
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884794
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-defensin 109-like
translation: MRFHLLLSEVFFLTLLSPVRSGLSSAVNHCLNLNGVCRRDTCKLTEDILGTCRRRWKCCCAWWILLPVPMPIVYSDYQAPRKKTEK
SIO_010081: LOC113884794
subclass of: SO_0000673
so part of: LOC113884794
location: join(6307329..6307383,6311719..6311924)
location: region:6307329-6311924:1
so has part: feature:6307329-6307383:1:exon
so has part: feature:6311719-6311924:1:exon

XP_027385545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6307329-6307383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6311719-6311924:1:exon

LOC113885012
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885012
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6316513..6320134
location: region:6316513-6320134:1
so has part: feature:6316513-6320134:1:exon
subclass of: SO_0000010

113885012
type: Gene
SIO_000068: ncbigene

position:6316513:1
position: 6316513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6320134:1
position: 6320134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6316513-6320134:1:exon

LOC113885012
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113885012
product: beta-defensin 130-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_027530122.1
SIO_010081: LOC113885012
subclass of: SO_0000673
so part of: LOC113885012
location: join(6316513..6316574,6319957..6320134)
location: region:6316513-6320134:1
so has part: feature:6316513-6316574:1:exon
so has part: feature:6319957-6320134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6316513-6316574:1:exon

position:6316574:1
position: 6316574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6319957-6320134:1:exon

position:6319957:1
position: 6319957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885012
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113885012
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-defensin 130-like
translation: MRLHLLLSVLLLSLAIIPKGRTGLIPGQKQCNLLKGVCKDGGCTTIEQPIGVCNEDKRCCRKWWIFFPYPTPAPKSKSP
SIO_010081: LOC113885012
subclass of: SO_0000673
so part of: LOC113885012
location: join(6316513..6316574,6319957..6320134)
location: region:6316513-6320134:1
so has part: feature:6316513-6316574:1:exon
so has part: feature:6319957-6320134:1:exon

XP_027385923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6316513-6316574:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6319957-6320134:1:exon

LOC113885123
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885123
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(6340956..6344987)
location: region:6340956-6344987:-1
so has part: feature:6340956-6344987:-1:exon

113885123
type: Gene
SIO_000068: ncbigene

position:6340956:-1
position: 6340956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6344987:-1
position: 6344987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6340956-6344987:-1:exon

LOC113885123
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113885123
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF02543
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC113885123
subclass of: SO_0000673
so part of: LOC113885123
location: complement(6340956..6344987)
location: region:6340956-6344987:-1
so has part: feature:6340956-6344987:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6340956-6344987:-1:exon

LOC113885096
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885096
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6346096..6346247)
location: region:6346096-6346247:-1
so has part: feature:6346096-6346247:-1:exon
subclass of: SO_0000573

113885096
type: Gene
SIO_000068: ncbigene

position:6346096:-1
position: 6346096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6346247:-1
position: 6346247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6346096-6346247:-1:exon

LOC113885096
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30522
gene: LOC113885096
product: 5.8S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509137.1
SIO_010081: LOC113885096
subclass of: SO_0000673
so part of: LOC113885096
location: complement(6346096..6346247)
location: region:6346096-6346247:-1
so has part: feature:6346096-6346247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6346096-6346247:-1:exon

LOC113884774
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884774
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6362428..6366374
location: region:6362428-6366374:1
so has part: feature:6362428-6366374:1:exon
subclass of: SO_0000011

113884774
type: Gene
SIO_000068: ncbigene

position:6362428:1
position: 6362428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6366374:1
position: 6366374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6362428-6366374:1:exon

LOC113884774
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884774
product: uncharacterized LOC113884774
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 52% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_003509015.1
SIO_010081: LOC113884774
subclass of: SO_0000673
so part of: LOC113884774
location: join(6362428..6362465,6364326..6364457,6365997..6366374)
location: region:6362428-6366374:1
so has part: feature:6362428-6362465:1:exon
so has part: feature:6364326-6364457:1:exon
so has part: feature:6365997-6366374:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6362428-6362465:1:exon

position:6362465:1
position: 6362465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6364326-6364457:1:exon

position:6364326:1
position: 6364326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6364457:1
position: 6364457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6365997-6366374:1:exon

position:6365997:1
position: 6365997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113885040
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6471426..6473367
location: region:6471426-6473367:1
so has part: feature:6471426-6473367:1:exon
subclass of: SO_0000011

113885040
type: Gene
SIO_000068: ncbigene

position:6471426:1
position: 6471426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6473367:1
position: 6473367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6471426-6473367:1:exon

LOC113885040
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113885040
product: uncharacterized LOC113885040
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XR_003509110.1
SIO_010081: LOC113885040
subclass of: SO_0000673
so part of: LOC113885040
location: join(6471426..6471633,6473138..6473367)
location: region:6471426-6473367:1
so has part: feature:6471426-6471633:1:exon
so has part: feature:6473138-6473367:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6471426-6471633:1:exon

position:6471633:1
position: 6471633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6473138-6473367:1:exon

position:6473138:1
position: 6473138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884996
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884996
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6514250..6523047
location: region:6514250-6523047:1
so has part: feature:6514250-6523047:1:exon
subclass of: SO_0000011

113884996
type: Gene
SIO_000068: ncbigene

position:6514250:1
position: 6514250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6523047:1
position: 6523047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6514250-6523047:1:exon

LOC113884996
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884996
product: uncharacterized LOC113884996
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_003509092.1
SIO_010081: LOC113884996
subclass of: SO_0000673
so part of: LOC113884996
location: join(6514250..6514468,6522802..6523047)
location: region:6514250-6523047:1
so has part: feature:6514250-6514468:1:exon
so has part: feature:6522802-6523047:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6514250-6514468:1:exon

position:6514468:1
position: 6514468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6522802-6523047:1:exon

position:6522802:1
position: 6522802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884995
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6580351..6589173
location: region:6580351-6589173:1
so has part: feature:6580351-6589173:1:exon
subclass of: SO_0000011

113884995
type: Gene
SIO_000068: ncbigene

position:6580351:1
position: 6580351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6589173:1
position: 6589173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6580351-6589173:1:exon

LOC113884995
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884995
product: uncharacterized LOC113884995
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XR_003509091.1
SIO_010081: LOC113884995
subclass of: SO_0000673
so part of: LOC113884995
location: join(6580351..6580636,6588923..6589173)
location: region:6580351-6589173:1
so has part: feature:6580351-6580636:1:exon
so has part: feature:6588923-6589173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6580351-6580636:1:exon

position:6580636:1
position: 6580636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6588923-6589173:1:exon

position:6588923:1
position: 6588923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884923
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884923
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6622629..6629406
location: region:6622629-6629406:1
so has part: feature:6622629-6629406:1:exon
subclass of: SO_0000010

113884923
type: Gene
SIO_000068: ncbigene

position:6622629:1
position: 6622629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6629406:1
position: 6629406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6622629-6629406:1:exon

LOC113884923
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: LOC113884923
product: putative protein FAM90A15P, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003509058.1
SIO_010081: LOC113884923
so part of: LOC113884923
location: join(6622629..6623735,6625524..6625719,6629296..6629406)
location: region:6622629-6629406:1
so has part: feature:6622629-6623735:1:exon
so has part: feature:6625524-6625719:1:exon
so has part: feature:6629296-6629406:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6622629-6623735:1:exon

position:6623735:1
position: 6623735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6625524-6625719:1:exon

position:6625524:1
position: 6625524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6625719:1
position: 6625719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6629296-6629406:1:exon

position:6629296:1
position: 6629296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884923
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884923
product: putative protein FAM90A15P, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_027530031.1
SIO_010081: LOC113884923
subclass of: SO_0000673
so part of: LOC113884923
location: join(6622629..6623735,6625524..6625723)
location: region:6622629-6625723:1
so has part: feature:6622629-6623735:1:exon
so has part: feature:6625524-6625723:1:exon

position:6625723:1
position: 6625723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6622629-6623735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6625524-6625723:1:exon

LOC113884923
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884923
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protein FAM90A15P
translation: MPVLIHTSKRKSFQDPDHPRGSPTRRDDVKSSPPTVPLVGRNLAPASKGRIKAPGKRCAQTPSLTCVNPPKKPRLSPVQIPQQSTPTAGLGAFLNLPPPPCTAARGPRVATRVSRETPAQGQRFDLQPLADRSPSRSVGAVSAAQPLPIICVPAQPLRMLFLRDGEGCWSCGYTAPLSPRPVEQPALPAQSPSVNQEPDGHAVPGPRSILYDDLQVSSSSEESDWDEDTSGN
SIO_010081: LOC113884923
subclass of: SO_0000673
so part of: LOC113884923
location: 6622630..6623328
location: region:6622630-6623328:1
so has part: feature:6622630-6623328:1:exon

XP_027385832.1
type: Protein
SIO_000068: ncbiprotein

position:6622630:1
position: 6622630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6623328:1
position: 6623328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6622630-6623328:1:exon

LOC113884927
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6741031..6742976
location: region:6741031-6742976:1
so has part: feature:6741031-6742976:1:exon
subclass of: SO_0000011

113884927
type: Gene
SIO_000068: ncbigene

position:6741031:1
position: 6741031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6742976:1
position: 6742976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6741031-6742976:1:exon

LOC113884927
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884927
product: uncharacterized LOC113884927
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XR_003509061.1
SIO_010081: LOC113884927
subclass of: SO_0000673
so part of: LOC113884927
location: join(6741031..6741246,6742747..6742976)
location: region:6741031-6742976:1
so has part: feature:6741031-6741246:1:exon
so has part: feature:6742747-6742976:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6741031-6741246:1:exon

position:6741246:1
position: 6741246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6742747-6742976:1:exon

position:6742747:1
position: 6742747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884926
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6784153..6792319
location: region:6784153-6792319:1
so has part: feature:6784153-6792319:1:exon
subclass of: SO_0000011

113884926
type: Gene
SIO_000068: ncbigene

position:6784153:1
position: 6784153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6792319:1
position: 6792319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6784153-6792319:1:exon

LOC113884926
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884926
product: uncharacterized LOC113884926
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XR_003509060.1
SIO_010081: LOC113884926
subclass of: SO_0000673
so part of: LOC113884926
location: join(6784153..6784499,6792064..6792319)
location: region:6784153-6792319:1
so has part: feature:6784153-6784499:1:exon
so has part: feature:6792064-6792319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6784153-6784499:1:exon

position:6784499:1
position: 6784499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6792064-6792319:1:exon

position:6792064:1
position: 6792064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884795
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884795
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6855994..6858365
location: region:6855994-6858365:1
so has part: feature:6855994-6858365:1:exon
subclass of: SO_0000010

113884795
type: Gene
SIO_000068: ncbigene

position:6855994:1
position: 6855994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6858365:1
position: 6858365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6855994-6858365:1:exon

LOC113884795
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884795
product: putative protein FAM90A23P
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_027529745.1
SIO_010081: LOC113884795
subclass of: SO_0000673
so part of: LOC113884795
location: join(6855994..6856047,6856555..6856751,6857142..6857247,6857769..6858365)
location: region:6855994-6858365:1
so has part: feature:6855994-6856047:1:exon
so has part: feature:6856555-6856751:1:exon
so has part: feature:6857142-6857247:1:exon
so has part: feature:6857769-6858365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6855994-6856047:1:exon

position:6856047:1
position: 6856047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6856555-6856751:1:exon

position:6856555:1
position: 6856555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6856751:1
position: 6856751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6857142-6857247:1:exon

position:6857142:1
position: 6857142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6857247:1
position: 6857247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6857769-6858365:1:exon

position:6857769:1
position: 6857769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884795
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protein FAM90A23P
translation: MAGHYGWLRACRLFQDQKVKCKDCGAFGHTARRLRCPMKRWQGALVPLPLGSRFGKENLAWKLQDPPTPGTPNTAEREEEERQRKEEQQRKLLQQFPRRPCSRQPQSWNEEPEPGLCLRHPNMPVLIHTSKRKSFQDPDHPRGSPMRRDDVKSSLPALPLIGRNLAPASKGRIEAPGKRCAQTPSLTCVNPPKKPKLSPVQTPQQSTPTADLGAFLNLPPPPSTAGRGSRVAARVSRETPVQGQRFDVQPPADRSSSRSVGAVSAAHPPPIILVPAQPLRMLFLRDSEGCWSCRYTAPPPLQPAEQPAPPVQRLSID
SIO_010081: LOC113884795
subclass of: SO_0000673
so part of: LOC113884795
location: join(6855994..6856047,6856555..6856751,6857142..6857247,6857769..6858365)
location: region:6855994-6858365:1
so has part: feature:6855994-6856047:1:exon
so has part: feature:6856555-6856751:1:exon
so has part: feature:6857142-6857247:1:exon
so has part: feature:6857769-6858365:1:exon

XP_027385546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6855994-6856047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6856555-6856751:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6857142-6857247:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6857769-6858365:1:exon

LOC113884796
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6858407..6881430)
location: region:6858407-6881430:-1
so has part: feature:6858407-6881430:-1:exon

113884796
type: Gene
SIO_000068: ncbigene

position:6858407:-1
position: 6858407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6881430:-1
position: 6881430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6858407-6881430:-1:exon

LOC113884796
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884796
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC113884796
subclass of: SO_0000673
so part of: LOC113884796
location: complement(6858407..6858579)
location: region:6858407-6858579:-1
so has part: feature:6858407-6858579:-1:exon

position:6858579:-1
position: 6858579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6858407-6858579:-1:exon

LOC113884796
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884796
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC113884796
subclass of: SO_0000673
so part of: LOC113884796
location: complement(6864636..6864744)
location: region:6864636-6864744:-1
so has part: feature:6864636-6864744:-1:exon

position:6864636:-1
position: 6864636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6864744:-1
position: 6864744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6864636-6864744:-1:exon

LOC113884796
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884796
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC113884796
subclass of: SO_0000673
so part of: LOC113884796
location: complement(6881063..6881430)
location: region:6881063-6881430:-1
so has part: feature:6881063-6881430:-1:exon

position:6881063:-1
position: 6881063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6881063-6881430:-1:exon

LOC113884797
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6909915..6911179
location: region:6909915-6911179:1
so has part: feature:6909915-6911179:1:exon

113884797
type: Gene
SIO_000068: ncbigene

position:6909915:1
position: 6909915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6911179:1
position: 6911179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6909915-6911179:1:exon

LOC113884797
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884797
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113884797
subclass of: SO_0000673
so part of: LOC113884797
location: 6909915..6909932
location: region:6909915-6909932:1
so has part: feature:6909915-6909932:1:exon

position:6909932:1
position: 6909932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6909915-6909932:1:exon

LOC113884797
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884797
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113884797
subclass of: SO_0000673
so part of: LOC113884797
location: 6910078..6910160
location: region:6910078-6910160:1
so has part: feature:6910078-6910160:1:exon

position:6910078:1
position: 6910078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6910160:1
position: 6910160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6910078-6910160:1:exon

LOC113884797
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113884797
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113884797
subclass of: SO_0000673
so part of: LOC113884797
location: 6910821..6911179
location: region:6910821-6911179:1
so has part: feature:6910821-6911179:1:exon

position:6910821:1
position: 6910821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6910821-6911179:1:exon

LOC113884929
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7019637..7026108
location: region:7019637-7026108:1
so has part: feature:7019637-7026108:1:exon
subclass of: SO_0000011

113884929
type: Gene
SIO_000068: ncbigene

position:7019637:1
position: 7019637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7026108:1
position: 7026108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7019637-7026108:1:exon

LOC113884929
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884929
product: uncharacterized LOC113884929
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_003509063.1
SIO_010081: LOC113884929
subclass of: SO_0000673
so part of: LOC113884929
location: join(7019637..7019799,7025696..7026108)
location: region:7019637-7026108:1
so has part: feature:7019637-7019799:1:exon
so has part: feature:7025696-7026108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7019637-7019799:1:exon

position:7019799:1
position: 7019799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7025696-7026108:1:exon

position:7025696:1
position: 7025696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884924
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7060713..7061672
location: region:7060713-7061672:1
so has part: feature:7060713-7061672:1:exon
subclass of: SO_0000010

113884924
type: Gene
SIO_000068: ncbigene

position:7060713:1
position: 7060713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7061672:1
position: 7061672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7060713-7061672:1:exon

LOC113884924
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884924
product: beta-defensin 103A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 41% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027530033.1
SIO_010081: LOC113884924
subclass of: SO_0000673
so part of: LOC113884924
location: join(7060713..7060868,7061528..7061672)
location: region:7060713-7061672:1
so has part: feature:7060713-7060868:1:exon
so has part: feature:7061528-7061672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7060713-7060868:1:exon

position:7060868:1
position: 7060868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7061528-7061672:1:exon

position:7061528:1
position: 7061528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884924
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-defensin 103A-like
translation: MRLYYLLFALLFLFLLPVPGNGSIISGLQKYYCKIRSGQCALIGCLPKEEQIGRCSLRVRKCCRKKK
SIO_010081: LOC113884924
subclass of: SO_0000673
so part of: LOC113884924
location: join(7060810..7060868,7061528..7061672)
location: region:7060810-7061672:1
so has part: feature:7060810-7060868:1:exon
so has part: feature:7061528-7061672:1:exon

XP_027385834.1
type: Protein
SIO_000068: ncbiprotein

position:7060810:1
position: 7060810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7060810-7060868:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7061528-7061672:1:exon

LOC113884798
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7083688..7100738
location: region:7083688-7100738:1
so has part: feature:7083688-7100738:1:exon
subclass of: SO_0000010

113884798
type: Gene
SIO_000068: ncbigene

position:7083688:1
position: 7083688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7100738:1
position: 7100738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7083688-7100738:1:exon

LOC113884798
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884798
product: uncharacterized LOC113884798
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027529747.1
SIO_010081: LOC113884798
subclass of: SO_0000673
so part of: LOC113884798
location: join(7083688..7083936,7098752..7098996,7100481..7100738)
location: region:7083688-7100738:1
so has part: feature:7083688-7083936:1:exon
so has part: feature:7098752-7098996:1:exon
so has part: feature:7100481-7100738:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7083688-7083936:1:exon

position:7083936:1
position: 7083936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7098752-7098996:1:exon

position:7098752:1
position: 7098752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7098996:1
position: 7098996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7100481-7100738:1:exon

position:7100481:1
position: 7100481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884798
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113884798
translation: MFPSLGASEPEKSLSGHLRTRGASWQGPKGRRLASGDSVPGPGSSAETAGDARLQNVGGSSPPLLLSKFREPVTANTRELSCWHTSAPALCYKGHSHDTQGRGSVNQFLITKSTACTEFLQEPGTFIKRQEQPLLQHQPQSSGRQHEAPSPAPRAPLPGPVCWVRIYSKSKKSSKLPLEYGCLYSVLVPCRHETDWHLFRAPSTMLQEVVKEGKHTVGTNAESETEPFNTPSKI
SIO_010081: LOC113884798
subclass of: SO_0000673
so part of: LOC113884798
location: join(7083688..7083936,7098752..7098996,7100481..7100691)
location: region:7083688-7100691:1
so has part: feature:7083688-7083936:1:exon
so has part: feature:7098752-7098996:1:exon
so has part: feature:7100481-7100691:1:exon

XP_027385548.1
type: Protein
SIO_000068: ncbiprotein

position:7100691:1
position: 7100691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7083688-7083936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7098752-7098996:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7100481-7100691:1:exon

LOC113884928
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7141622..7143545
location: region:7141622-7143545:1
so has part: feature:7141622-7143545:1:exon
subclass of: SO_0000011

113884928
type: Gene
SIO_000068: ncbigene

position:7141622:1
position: 7141622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7143545:1
position: 7143545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7141622-7143545:1:exon

LOC113884928
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884928
product: uncharacterized LOC113884928
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XR_003509062.1
SIO_010081: LOC113884928
subclass of: SO_0000673
so part of: LOC113884928
location: join(7141622..7141830,7143304..7143545)
location: region:7141622-7143545:1
so has part: feature:7141622-7141830:1:exon
so has part: feature:7143304-7143545:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7141622-7141830:1:exon

position:7141830:1
position: 7141830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7143304-7143545:1:exon

position:7143304:1
position: 7143304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884925
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7183597..7206031
location: region:7183597-7206031:1
so has part: feature:7183597-7206031:1:exon
subclass of: SO_0000011

113884925
type: Gene
SIO_000068: ncbigene

position:7183597:1
position: 7183597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7206031:1
position: 7206031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7183597-7206031:1:exon

LOC113884925
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884925
product: uncharacterized LOC113884925
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_003509059.1
SIO_010081: LOC113884925
subclass of: SO_0000673
so part of: LOC113884925
location: join(7183597..7184109,7190841..7191252,7205760..7206031)
location: region:7183597-7206031:1
so has part: feature:7183597-7184109:1:exon
so has part: feature:7190841-7191252:1:exon
so has part: feature:7205760-7206031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7183597-7184109:1:exon

position:7184109:1
position: 7184109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7190841-7191252:1:exon

position:7190841:1
position: 7190841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7191252:1
position: 7191252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7205760-7206031:1:exon

position:7205760:1
position: 7205760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884998
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7208263..7211748
location: region:7208263-7211748:1
so has part: feature:7208263-7211748:1:exon
subclass of: SO_0000011

113884998
type: Gene
SIO_000068: ncbigene

position:7208263:1
position: 7208263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7211748:1
position: 7211748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7208263-7211748:1:exon

LOC113884998
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884998
product: uncharacterized LOC113884998
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_003509093.1
SIO_010081: LOC113884998
subclass of: SO_0000673
so part of: LOC113884998
location: join(7208263..7209128,7209861..7209956,7210485..7210567,7211012..7211748)
location: region:7208263-7211748:1
so has part: feature:7208263-7209128:1:exon
so has part: feature:7209861-7209956:1:exon
so has part: feature:7210485-7210567:1:exon
so has part: feature:7211012-7211748:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7208263-7209128:1:exon

position:7209128:1
position: 7209128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7209861-7209956:1:exon

position:7209861:1
position: 7209861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7209956:1
position: 7209956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7210485-7210567:1:exon

position:7210485:1
position: 7210485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7210567:1
position: 7210567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7211012-7211748:1:exon

position:7211012:1
position: 7211012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884920
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7218505..7226420
location: region:7218505-7226420:1
so has part: feature:7218505-7226420:1:exon
subclass of: SO_0000010

113884920
type: Gene
SIO_000068: ncbigene

position:7218505:1
position: 7218505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7226420:1
position: 7226420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7218505-7226420:1:exon

LOC113884920
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884920
product: protein FAM90A27P-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_027530028.1
SIO_010081: LOC113884920
subclass of: SO_0000673
so part of: LOC113884920
location: join(7218505..7219411,7223118..7223286,7223715..7223911,7224303..7224408,7224936..7226420)
location: region:7218505-7226420:1
so has part: feature:7218505-7219411:1:exon
so has part: feature:7223118-7223286:1:exon
so has part: feature:7223715-7223911:1:exon
so has part: feature:7224303-7224408:1:exon
so has part: feature:7224936-7226420:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7218505-7219411:1:exon

position:7219411:1
position: 7219411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7223118-7223286:1:exon

position:7223118:1
position: 7223118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7223286:1
position: 7223286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7223715-7223911:1:exon

position:7223715:1
position: 7223715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7223911:1
position: 7223911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7224303-7224408:1:exon

position:7224303:1
position: 7224303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7224408:1
position: 7224408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7224936-7226420:1:exon

position:7224936:1
position: 7224936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM90A27P-like
translation: MAGHYGWLRACQLFQDQKVRKQNSGPVRQMVPPPQEKDSMVKCKDCGAFGHTARSLRCPMKRWQGAMVPLPLGSRFGKENLAWKLQDTPTPGTPNTAERKEEERQRKEEQQRKLLQRFPRRPHGRQPQSWKEEPEPGLCLRHPNMPILIHTSKRQSFQDPDHPRGSPTRRHDVKSSLPTVPLIGRNLAPASKGRIEAPGKRCAQTPSLTCVNPPKKPRLSPVQTPQQSTLTADLGAFLNLPPPPCTAGRGPRVAARVSRETPAQGQRFDLQPPADRSPSRSVGAVPAAQPPPIIRVPAQPLRMLFLRDGEGCWSCWYTAPPSPWPAERPALAAQSPSVNQEPDGHAVPGPRSILYDDLQVSSSSEESDWDEDTSGN
SIO_010081: LOC113884920
subclass of: SO_0000673
so part of: LOC113884920
location: join(7223167..7223286,7223715..7223911,7224303..7224408,7224936..7225643)
location: region:7223167-7225643:1
so has part: feature:7223167-7223286:1:exon
so has part: feature:7223715-7223911:1:exon
so has part: feature:7224303-7224408:1:exon
so has part: feature:7224936-7225643:1:exon

XP_027385829.1
type: Protein
SIO_000068: ncbiprotein

position:7223167:1
position: 7223167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7225643:1
position: 7225643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7223167-7223286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7223715-7223911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7224303-7224408:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7224936-7225643:1:exon

LOC113884818
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7239681..7244255
location: region:7239681-7244255:1
so has part: feature:7239681-7244255:1:exon
subclass of: SO_0000010

113884818
type: Gene
SIO_000068: ncbigene

position:7239681:1
position: 7239681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7244255:1
position: 7244255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7239681-7244255:1:exon

LOC113884818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113884818
product: beta-defensin 109-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027529808.1
SIO_010081: LOC113884818
subclass of: SO_0000673
so part of: LOC113884818
location: join(7239681..7239735,7243936..7244255)
location: region:7239681-7244255:1
so has part: feature:7239681-7239735:1:exon
so has part: feature:7243936-7244255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7239681-7239735:1:exon

position:7239735:1
position: 7239735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7243936-7244255:1:exon

position:7243936:1
position: 7243936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113884818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-defensin 109-like
translation: MRLHLLLSALFFLTLLSPVRSGMGSARNHCLNLEGICRRDTCRTTEDIIAYCQRRWKCCRSWWILMPVPTPAIYSDYVEPIKPRIK
SIO_010081: LOC113884818
subclass of: SO_0000673
so part of: LOC113884818
location: join(7239681..7239735,7243936..7244141)
location: region:7239681-7244141:1
so has part: feature:7239681-7239735:1:exon
so has part: feature:7243936-7244141:1:exon

XP_027385609.1
type: Protein
SIO_000068: ncbiprotein

position:7244141:1
position: 7244141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7239681-7239735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7243936-7244141:1:exon

LOC113884933
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884933
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7288411..7294956
location: region:7288411-7294956:1
so has part: feature:7288411-7294956:1:exon
subclass of: SO_0000011

113884933
type: Gene
SIO_000068: ncbigene

position:7288411:1
position: 7288411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7294956:1
position: 7294956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7288411-7294956:1:exon

LOC113884933
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884933
product: uncharacterized LOC113884933
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_003509064.1
SIO_010081: LOC113884933
subclass of: SO_0000673
so part of: LOC113884933
location: join(7288411..7288616,7294774..7294956)
location: region:7288411-7294956:1
so has part: feature:7288411-7288616:1:exon
so has part: feature:7294774-7294956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7288411-7288616:1:exon

position:7288616:1
position: 7288616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7294774-7294956:1:exon

position:7294774:1
position: 7294774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPM6A
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: GPM6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7303246..7560857)
location: region:7303246-7560857:-1
so has part: feature:7303246-7560857:-1:exon
subclass of: SO_0000010

113884779
type: Gene
SIO_000068: ncbigene

position:7303246:-1
position: 7303246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7560857:-1
position: 7560857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7303246-7560857:-1:exon

GPM6A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: GPM6A
product: glycoprotein M6A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 116 ESTs, 1 long SRA read, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 150 samples with support for all annotated introns
transcript id: XM_027529712.1
SIO_010081: GPM6A
subclass of: SO_0000673
so part of: GPM6A
location: complement(join(7303246..7305342,7310836..7310901,7311704..7311780,7318899..7319052,7334548..7334704,7342470..7342662,7560780..7560857))
location: region:7303246-7560857:-1
so has part: feature:7560780-7560857:-1:exon
so has part: feature:7342470-7342662:-1:exon
so has part: feature:7334548-7334704:-1:exon
so has part: feature:7318899-7319052:-1:exon
so has part: feature:7311704-7311780:-1:exon
so has part: feature:7310836-7310901:-1:exon
so has part: feature:7303246-7305342:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7560780-7560857:-1:exon

position:7560780:-1
position: 7560780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7342470-7342662:-1:exon

position:7342470:-1
position: 7342470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7342662:-1
position: 7342662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7334548-7334704:-1:exon

position:7334548:-1
position: 7334548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7334704:-1
position: 7334704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7318899-7319052:-1:exon

position:7318899:-1
position: 7318899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7319052:-1
position: 7319052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7311704-7311780:-1:exon

position:7311704:-1
position: 7311704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7311780:-1
position: 7311780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7310836-7310901:-1:exon

position:7310836:-1
position: 7310836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7310901:-1
position: 7310901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7303246-7305342:-1:exon

position:7305342:-1
position: 7305342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPM6A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: GPM6A
product: glycoprotein M6A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 116 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_027529711.1
SIO_010081: GPM6A
subclass of: SO_0000673
so part of: GPM6A
location: complement(join(7303246..7305342,7310836..7310901,7311704..7311780,7318899..7319052,7334548..7334704,7342470..7342662,7495549..7495585))
location: region:7303246-7495585:-1
so has part: feature:7495549-7495585:-1:exon
so has part: feature:7342470-7342662:-1:exon
so has part: feature:7334548-7334704:-1:exon
so has part: feature:7318899-7319052:-1:exon
so has part: feature:7311704-7311780:-1:exon
so has part: feature:7310836-7310901:-1:exon
so has part: feature:7303246-7305342:-1:exon

position:7495585:-1
position: 7495585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7495549-7495585:-1:exon

position:7495549:-1
position: 7495549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7342470-7342662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7334548-7334704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7318899-7319052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7311704-7311780:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7310836-7310901:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7303246-7305342:-1:exon

GPM6A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: GPM6A
product: glycoprotein M6A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 130 ESTs, 2 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_027529710.1
SIO_010081: GPM6A
subclass of: SO_0000673
so part of: GPM6A
location: complement(join(7303246..7305342,7310836..7310901,7311704..7311780,7318899..7319052,7334548..7334704,7342470..7342662,7445601..7446358))
location: region:7303246-7446358:-1
so has part: feature:7445601-7446358:-1:exon
so has part: feature:7342470-7342662:-1:exon
so has part: feature:7334548-7334704:-1:exon
so has part: feature:7318899-7319052:-1:exon
so has part: feature:7311704-7311780:-1:exon
so has part: feature:7310836-7310901:-1:exon
so has part: feature:7303246-7305342:-1:exon

position:7446358:-1
position: 7446358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7445601-7446358:-1:exon

position:7445601:-1
position: 7445601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7342470-7342662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7334548-7334704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7318899-7319052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7311704-7311780:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7310836-7310901:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7303246-7305342:-1:exon

GPM6A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: GPM6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal membrane glycoprotein M6-a isoform X3
translation: MGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTLDVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIMLTYLFMLAWLGVTAFTSLPVYMYFNLWTICRNTTLVEGANLCLDLRQFGIVTIGEEKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYVKDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT
SIO_010081: GPM6A
subclass of: SO_0000673
so part of: GPM6A
location: complement(join(7305190..7305342,7310836..7310901,7311704..7311780,7318899..7319052,7334548..7334704,7342470..7342662,7560780..7560783))
location: region:7305190-7560783:-1
so has part: feature:7560780-7560783:-1:exon
so has part: feature:7342470-7342662:-1:exon
so has part: feature:7334548-7334704:-1:exon
so has part: feature:7318899-7319052:-1:exon
so has part: feature:7311704-7311780:-1:exon
so has part: feature:7310836-7310901:-1:exon
so has part: feature:7305190-7305342:-1:exon

XP_027385513.1
type: Protein
SIO_000068: ncbiprotein

position:7305190:-1
position: 7305190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7560783:-1
position: 7560783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7560780-7560783:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7342470-7342662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7334548-7334704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7318899-7319052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7311704-7311780:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7310836-7310901:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7305190-7305342:-1:exon

GPM6A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: GPM6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal membrane glycoprotein M6-a isoform X2
translation: MCCETHRGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTLDVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIMLTYLFMLAWLGVTAFTSLPVYMYFNLWTICRNTTLVEGANLCLDLRQFGIVTIGEEKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYVKDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT
SIO_010081: GPM6A
subclass of: SO_0000673
so part of: GPM6A
location: complement(join(7305190..7305342,7310836..7310901,7311704..7311780,7318899..7319052,7334548..7334704,7342470..7342662,7495549..7495570))
location: region:7305190-7495570:-1
so has part: feature:7495549-7495570:-1:exon
so has part: feature:7342470-7342662:-1:exon
so has part: feature:7334548-7334704:-1:exon
so has part: feature:7318899-7319052:-1:exon
so has part: feature:7311704-7311780:-1:exon
so has part: feature:7310836-7310901:-1:exon
so has part: feature:7305190-7305342:-1:exon

XP_027385512.1
type: Protein
SIO_000068: ncbiprotein

position:7495570:-1
position: 7495570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7495549-7495570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7342470-7342662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7334548-7334704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7318899-7319052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7311704-7311780:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7310836-7310901:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7305190-7305342:-1:exon

GPM6A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: GPM6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal membrane glycoprotein M6-a isoform X1
translation: MEENMEEGQTQKGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTLDVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIMLTYLFMLAWLGVTAFTSLPVYMYFNLWTICRNTTLVEGANLCLDLRQFGIVTIGEEKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYVKDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT
SIO_010081: GPM6A
subclass of: SO_0000673
so part of: GPM6A
location: complement(join(7305190..7305342,7310836..7310901,7311704..7311780,7318899..7319052,7334548..7334704,7342470..7342662,7445601..7445637))
location: region:7305190-7445637:-1
so has part: feature:7445601-7445637:-1:exon
so has part: feature:7342470-7342662:-1:exon
so has part: feature:7334548-7334704:-1:exon
so has part: feature:7318899-7319052:-1:exon
so has part: feature:7311704-7311780:-1:exon
so has part: feature:7310836-7310901:-1:exon
so has part: feature:7305190-7305342:-1:exon

XP_027385511.1
type: Protein
SIO_000068: ncbiprotein

position:7445637:-1
position: 7445637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7445601-7445637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7342470-7342662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7334548-7334704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7318899-7319052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7311704-7311780:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7310836-7310901:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7305190-7305342:-1:exon

WDR17
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: WDR17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7585828..7655890
location: region:7585828-7655890:1
so has part: feature:7585828-7655890:1:exon
subclass of: SO_0000010

113884851
type: Gene
SIO_000068: ncbigene

position:7585828:1
position: 7585828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7655890:1
position: 7655890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7585828-7655890:1:exon

WDR17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: WDR17
product: WD repeat domain 17, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_027529900.1
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
location: join(7585828..7585980,7607832..7607960,7609172..7609355,7610891..7611121,7614297..7614548,7616401..7616523,7617936..7618120,7618733..7618901,7620831..7620922,7622720..7622802,7625273..7625359,7628635..7628799,7630497..7630699,7632087..7632236,7632324..7632454,7633217..7633342,7635885..7635949,7638971..7639103,7639553..7639644,7640894..7640993,7642177..7642316,7645268..7645288,7645479..7645590,7649831..7649972,7650246..7650348,7651195..7651296,7652645..7652743,7653056..7653239,7655595..7655890)
location: region:7585828-7655890:1
so has part: feature:7585828-7585980:1:exon
so has part: feature:7607832-7607960:1:exon
so has part: feature:7609172-7609355:1:exon
so has part: feature:7610891-7611121:1:exon
so has part: feature:7614297-7614548:1:exon
so has part: feature:7616401-7616523:1:exon
so has part: feature:7617936-7618120:1:exon
so has part: feature:7618733-7618901:1:exon
so has part: feature:7620831-7620922:1:exon
so has part: feature:7622720-7622802:1:exon
so has part: feature:7625273-7625359:1:exon
so has part: feature:7628635-7628799:1:exon
so has part: feature:7630497-7630699:1:exon
so has part: feature:7632087-7632236:1:exon
so has part: feature:7632324-7632454:1:exon
so has part: feature:7633217-7633342:1:exon
so has part: feature:7635885-7635949:1:exon
so has part: feature:7638971-7639103:1:exon
so has part: feature:7639553-7639644:1:exon
so has part: feature:7640894-7640993:1:exon
so has part: feature:7642177-7642316:1:exon
so has part: feature:7645268-7645288:1:exon
so has part: feature:7645479-7645590:1:exon
so has part: feature:7649831-7649972:1:exon
so has part: feature:7650246-7650348:1:exon
so has part: feature:7651195-7651296:1:exon
so has part: feature:7652645-7652743:1:exon
so has part: feature:7653056-7653239:1:exon
so has part: feature:7655595-7655890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7585828-7585980:1:exon

position:7585980:1
position: 7585980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7607832-7607960:1:exon

position:7607832:1
position: 7607832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7607960:1
position: 7607960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7609172-7609355:1:exon

position:7609172:1
position: 7609172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7609355:1
position: 7609355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7610891-7611121:1:exon

position:7610891:1
position: 7610891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7611121:1
position: 7611121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7614297-7614548:1:exon

position:7614297:1
position: 7614297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7614548:1
position: 7614548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7616401-7616523:1:exon

position:7616401:1
position: 7616401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7616523:1
position: 7616523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7617936-7618120:1:exon

position:7617936:1
position: 7617936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7618120:1
position: 7618120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7618733-7618901:1:exon

position:7618733:1
position: 7618733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7618901:1
position: 7618901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7620831-7620922:1:exon

position:7620831:1
position: 7620831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7620922:1
position: 7620922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7622720-7622802:1:exon

position:7622720:1
position: 7622720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7622802:1
position: 7622802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7625273-7625359:1:exon

position:7625273:1
position: 7625273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7625359:1
position: 7625359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7628635-7628799:1:exon

position:7628635:1
position: 7628635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7628799:1
position: 7628799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7630497-7630699:1:exon

position:7630497:1
position: 7630497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7630699:1
position: 7630699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7632087-7632236:1:exon

position:7632087:1
position: 7632087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7632236:1
position: 7632236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7632324-7632454:1:exon

position:7632324:1
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position:7632454:1
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urn:…
SIO_000300: 16
SIO_000628: feature:7633217-7633342:1:exon

position:7633217:1
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urn:…
SIO_000300: 17
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position:7635949:1
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urn:…
SIO_000300: 18
SIO_000628: feature:7638971-7639103:1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:7639553-7639644:1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:7640894-7640993:1:exon

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urn:…
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:7645479-7645590:1:exon

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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
SIO_000628: feature:7650246-7650348:1:exon

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urn:…
SIO_000300: 26
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urn:…
SIO_000300: 27
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SIO_000300: 28
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urn:…
SIO_000300: 29
SIO_000628: feature:7655595-7655890:1:exon

position:7655595:1
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WDR17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: WDR17
product: WD repeat domain 17, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 3 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_027529895.1
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
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location: region:7585832-7655887:1
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position:7655887:1
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urn:…
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SIO_000628: feature:7620831-7620922:1:exon

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SIO_000628: feature:7622720-7622802:1:exon

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SIO_000628: feature:7625273-7625359:1:exon

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SIO_000628: feature:7632324-7632454:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7633217-7633342:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7634825-7634980:1:exon

position:7634825:1
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reference: sequence
type: ForwardStrandPosition
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:7635885-7635949:1:exon

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SIO_000300: 19
SIO_000628: feature:7638971-7639103:1:exon

urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:7640894-7640993:1:exon

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SIO_000300: 22
SIO_000628: feature:7642177-7642316:1:exon

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SIO_000300: 23
SIO_000628: feature:7645479-7645590:1:exon

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SIO_000300: 24
SIO_000628: feature:7649831-7649972:1:exon

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SIO_000300: 25
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SIO_000300: 26
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SIO_000300: 27
SIO_000628: feature:7652645-7652743:1:exon

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SIO_000300: 28
SIO_000628: feature:7653056-7653239:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7655595-7655887:1:exon

WDR17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: WDR17
product: WD repeat domain 17, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_027529892.1
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
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location: region:7585849-7655890:1
so has part: feature:7585849-7585980:1:exon
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position:7585849:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
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SIO_000628: feature:7585849-7585980:1:exon

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reference: sequence
type: ForwardStrandPosition
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reference: sequence
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urn:…
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SIO_000628: feature:7640894-7640993:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7642177-7642316:1:exon

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SIO_000628: feature:7645479-7645590:1:exon

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SIO_000628: feature:7653056-7653239:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7655595-7655890:1:exon

WDR17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: WDR17
product: WD repeat domain 17, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027529896.1
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
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location: region:7585862-7655890:1
so has part: feature:7585862-7585980:1:exon
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position:7585862:1
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reference: sequence
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urn:…
SIO_000300: 1
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:7653056-7653239:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7655595-7655890:1:exon

WDR17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: WDR17
product: WD repeat domain 17, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_027529891.1
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
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position:7585863:1
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WDR17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: WDR17
product: WD repeat domain 17, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_027529897.1
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
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location: region:7585863-7655890:1
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WDR17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: WDR17
product: WD repeat domain 17, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_027529894.1
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
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WDR17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: WDR17
product: WD repeat domain 17, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_027529893.1
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
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urn:…
SIO_000300: 21
SIO_000628: feature:7640894-7640993:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7642177-7642316:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7645268-7645288:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7645479-7645590:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7649831-7649972:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7650246-7650348:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7651195-7651296:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7652645-7652743:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7653056-7653239:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7655595-7655890:1:exon

WDR17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: WDR17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 17 isoform X1
translation: MAWMTYISHWFEQDDWYEGLQRVNMSQVRQVGLLAAGCQPWNRDVCAASGDRFAYCATLAIYVYQLDHHYNEFKLHAIMSEHKKTITALSWCPHNPDLFASGSADNLVIIWNVAEQKVIAKLDSTKGTPASLSWCWNAGDAVAFASHRGPLFIWTISGPDSGVTVHRDAHSFLSDICMFRWHTQKKGKVAFGHVDGSLSIFQPGNKSQKHVLRPDSLEGTDEEDPVSALEWDPLSTDYLLVANLHHGIRLVDSESLCCITTFSFPSAAASVQCLAWVPSAPGMFITGDSQVGVLRIWNVSRTTPVDNFKLKKTGFHCLHVLNSPPRKKFSNQSPTKNHYTSSTSEAVPPPTLTQNQAFSLPPGHAVCCFLDGGVGLYDMGAKKWDFLRDLGHVETIFDCKFKPDNPNLLATASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGDLNCIAGATSRNGAFIWDIKKGKMIQRFNEHGKNGIFCIAWSHKDSKRIATCSGDGYCIIRTIDGKILHKYRHPAAVFGCDWSQNNKDMIATGCEDKNVRVYYVATSSDQPLKVFSGHTEKVFHVRWSPLREGTLCSGSDDGSVRIWDYTQDACINILSGHTAPVRGLMWNTEIPYLLISGSWDYTIKVWDTREGICLDTVCDHGADVYGLTCHPRRPFTMASCSRDSTVRLWSLTPLITPLQINILADRPWEEILGNTDSAIEQGAPPLLCGKVSRDIKQEIEKLSGNLRVKKLRWFSECLSPPGGSDNLWNLVAVIKGQDDSLLPQNYCKGIMHLKHLIKFRTSEAQELTTVKMSKFGGGIGVPTKEERLKEAAQIHLRLGQIQRYCELMVELGEWDKALSVAPSVSVKYWKKLMQRRADQLIQEDKDDVIPYCIAIGDVKKLVHFFMSRGQLKEALLVAQAACEGNMQTFHVSTPKGPSFSDDIYKEDFKELLQEACRELAEWYFQDGRAVLAACCHLAVDNIELAMAYLIRGNELELAVCVGTVLGEPAAPATHYALELLARKCMMIPACFPSVGYRDLAADLLLMTPDSELQLVKLCAFYPGCTEERNDLHEKCKLPTVEECMQLAETAHADGKIFETIKYYLLSQEPEKALPIGIDFIKEHISSSDWTLDTIYPVLDLLSYIRTEKLALHTCTEARNELLILCGYVGALLAIRRQYQSIVPALYEYTSQLLKRRKVSVPLKIEHLSEELDAWRACTQIVNPSSEDSPYTPPSDSQRLVYAALLKRLKEEPLRGIVGPDYVTGSNLPSHSDTHISCLTGLKIQGPVFFLEDGKSTISLNDALMWAKVNPFSPLGTGIRLNPF
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
location: join(7601347..7601412,7607832..7607960,7609172..7609355,7610891..7611121,7614297..7614548,7616401..7616523,7617936..7618120,7618733..7618901,7620831..7620922,7622720..7622802,7625273..7625359,7628635..7628799,7630497..7630699,7632087..7632236,7632324..7632454,7633217..7633342,7634825..7634980,7635885..7635949,7638971..7639103,7639553..7639644,7640894..7640993,7642177..7642316,7645268..7645288,7645479..7645590,7649831..7649972,7650246..7650348,7651195..7651296,7652645..7652743,7653056..7653239,7655595..7655714)
location: region:7601347-7655714:1
so has part: feature:7601347-7601412:1:exon
so has part: feature:7607832-7607960:1:exon
so has part: feature:7609172-7609355:1:exon
so has part: feature:7610891-7611121:1:exon
so has part: feature:7614297-7614548:1:exon
so has part: feature:7616401-7616523:1:exon
so has part: feature:7617936-7618120:1:exon
so has part: feature:7618733-7618901:1:exon
so has part: feature:7620831-7620922:1:exon
so has part: feature:7622720-7622802:1:exon
so has part: feature:7625273-7625359:1:exon
so has part: feature:7628635-7628799:1:exon
so has part: feature:7630497-7630699:1:exon
so has part: feature:7632087-7632236:1:exon
so has part: feature:7632324-7632454:1:exon
so has part: feature:7633217-7633342:1:exon
so has part: feature:7634825-7634980:1:exon
so has part: feature:7635885-7635949:1:exon
so has part: feature:7638971-7639103:1:exon
so has part: feature:7639553-7639644:1:exon
so has part: feature:7640894-7640993:1:exon
so has part: feature:7642177-7642316:1:exon
so has part: feature:7645268-7645288:1:exon
so has part: feature:7645479-7645590:1:exon
so has part: feature:7649831-7649972:1:exon
so has part: feature:7650246-7650348:1:exon
so has part: feature:7651195-7651296:1:exon
so has part: feature:7652645-7652743:1:exon
so has part: feature:7653056-7653239:1:exon
so has part: feature:7655595-7655714:1:exon

XP_027385692.1
type: Protein
SIO_000068: ncbiprotein

position:7601347:1
position: 7601347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7655714:1
position: 7655714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7601347-7601412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7607832-7607960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7609172-7609355:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7610891-7611121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7614297-7614548:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7616401-7616523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7617936-7618120:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7618733-7618901:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7620831-7620922:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7622720-7622802:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7625273-7625359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7628635-7628799:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7630497-7630699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7632087-7632236:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7632324-7632454:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7633217-7633342:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7634825-7634980:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7635885-7635949:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7638971-7639103:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7639553-7639644:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7640894-7640993:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7642177-7642316:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7645268-7645288:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7645479-7645590:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7649831-7649972:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7650246-7650348:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7651195-7651296:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7652645-7652743:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7653056-7653239:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7655595-7655714:1:exon

WDR17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: WDR17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 17 isoform X6
translation: MAWMTYISHWFEQDDWYEGLQRVNMSQVRQVGLLAAGCQPWNRDVCAASGDRFAYCATLAIYVYQLDHHYNEFKLHAIMSEHKKTITALSWCPHNPDLFASGSADNLVIIWNVAEQKVIAKLDSTKGTPASLSWCWNAGDAVAFASHRGPLFIWTISGPDSGVTVHRDAHSFLSDICMFRWHTQKKGKVAFGHVDGSLSIFQPGNKSQKHVLRPDSLEGTDEEDPVSALEWDPLSTDYLLVANLHHGIRLVDSESLCCITTFSFPSAAASVQCLAWVPSAPGMFITGDSQVGVLRIWNVSRTTPVDNFKLKKTGFHCLHVLNSPPRKKFSNQSPTKNHYTSSTSEAVPPPTLTQNQAFSLPPGHAVCCFLDGGVGLYDMGAKKWDFLRDLGHVETIFDCKFKPDNPNLLATASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGDLNCIAGATSRNGAFIWDIKKGKMIQRFNEHGKNGIFCIAWSHKDSKRIATCSGDGYCIIRTIDGKILHKYRHPAAVFGCDWSQNNKDMIATGCEDKNVRVYYVATSSDQPLKVFSGHTEKVFHVRWSPLREGTLCSGSDDGSVRIWDYTQDACINILSGHTAPVRGLMWNTEIPYLLISGSWDYTIKVWDTREGICLDTVCDHGADVYGLTCHPRRPFTMASCSRDSTVRLWSLTPLITPLQINILADRPWEEILGNTDSAIEQGAPPLLCGKVSRDIKQEIEKLSGNLRVKKLRWFSECLSPPGGSDNLWNLVAVIKGQDDSLLPQNYCKGIMHLKHLIKFRTSEAQELTTVKMSKFGGGIGVPTKEERLKEAAQIHLRLGQIQRYCELMVELGEWDKALSVAPSVSVKYWKKLMQRRADQLIQEDKDDVIPYCIAIGDVKKLVHFFMSRGQLKEALLVAQAACEGNMQTFHVSTPKGPSFSDDIYKEDFKELLQEACRELAEWYFQDGRAVLAACCHLAVDNIELAMAYLIRGNELELAVCVGTVLGEPAAPATHYALELLARKCMMIPACFPSVGYRDLAADLLLMTPDSELQLVKLCAFYPGCTEERNDLHEKCKLPTVEECMQLAETAHADGKIFETIKYYLLSQEPEKALPIGIDFIKEHISSSDWTLDTIYPVLDLLSYIRTEKLALHTCTDQLLKRRKVSVPLKIEHLSEELDAWRACTQIVNPSSEDSPYTPPSDSQRLVYAALLKRLKEEPLRGIVGPDYVTGSNLPSHSDTHISCLTGLKIQGPVFFLEDGKSTISLNDALMWAKVNPFSPLGTGIRLNPF
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
location: join(7601347..7601412,7607832..7607960,7609172..7609355,7610891..7611121,7614297..7614548,7616401..7616523,7617936..7618120,7618733..7618901,7620831..7620922,7622720..7622802,7625273..7625359,7628635..7628799,7630497..7630699,7632087..7632236,7632324..7632454,7633217..7633342,7634825..7634980,7635885..7635949,7638971..7639103,7639553..7639644,7640894..7640993,7642177..7642316,7645268..7645288,7645479..7645590,7649831..7649972,7650246..7650348,7652645..7652743,7653056..7653239,7655595..7655714)
location: region:7601347-7655714:1
so has part: feature:7601347-7601412:1:exon
so has part: feature:7607832-7607960:1:exon
so has part: feature:7609172-7609355:1:exon
so has part: feature:7610891-7611121:1:exon
so has part: feature:7614297-7614548:1:exon
so has part: feature:7616401-7616523:1:exon
so has part: feature:7617936-7618120:1:exon
so has part: feature:7618733-7618901:1:exon
so has part: feature:7620831-7620922:1:exon
so has part: feature:7622720-7622802:1:exon
so has part: feature:7625273-7625359:1:exon
so has part: feature:7628635-7628799:1:exon
so has part: feature:7630497-7630699:1:exon
so has part: feature:7632087-7632236:1:exon
so has part: feature:7632324-7632454:1:exon
so has part: feature:7633217-7633342:1:exon
so has part: feature:7634825-7634980:1:exon
so has part: feature:7635885-7635949:1:exon
so has part: feature:7638971-7639103:1:exon
so has part: feature:7639553-7639644:1:exon
so has part: feature:7640894-7640993:1:exon
so has part: feature:7642177-7642316:1:exon
so has part: feature:7645268-7645288:1:exon
so has part: feature:7645479-7645590:1:exon
so has part: feature:7649831-7649972:1:exon
so has part: feature:7650246-7650348:1:exon
so has part: feature:7652645-7652743:1:exon
so has part: feature:7653056-7653239:1:exon
so has part: feature:7655595-7655714:1:exon

XP_027385697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7601347-7601412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7607832-7607960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7609172-7609355:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7610891-7611121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7614297-7614548:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7616401-7616523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7617936-7618120:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7618733-7618901:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7620831-7620922:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7622720-7622802:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7625273-7625359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7628635-7628799:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7630497-7630699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7632087-7632236:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7632324-7632454:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7633217-7633342:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7634825-7634980:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7635885-7635949:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7638971-7639103:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7639553-7639644:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7640894-7640993:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7642177-7642316:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7645268-7645288:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7645479-7645590:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7649831-7649972:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7650246-7650348:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7652645-7652743:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7653056-7653239:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7655595-7655714:1:exon

WDR17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: WDR17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 17 isoform X2
translation: MAWMTYISHWFEQDDWYEGLQRVNMSQVRQVGLLAAGCQPWNRDVCAASGDRFAYCATLAIYVYQLDHHYNEFKLHAIMSEHKKTITALSWCPHNPDLFASGSADNLVIIWNVAEQKVIAKLDSTKGTPASLSWCWNAGDAVAFASHRGPLFIWTISGPDSGVTVHRDAHSFLSDICMFRWHTQKKGKVAFGHVDGSLSIFQPGNKSQKHVLRPDSLEGTDEEDPVSALEWDPLSTDYLLVANLHHGIRLVDSESLCCITTFSFPSAAASVQCLAWVPSAPGMFITGDSQVGVLRIWNVSRTTPVDNFKLKKTGFHCLHVLNSPPRKKFSNQSPTKNHYTSSTSEAVPPPTLTQNQAFSLPPGHAVCCFLDGGVGLYDMGAKKWDFLRDLGHVETIFDCKFKPDNPNLLATASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGDLNCIAGATSRNGAFIWDIKKGKMIQRFNEHGKNGIFCIAWSHKDSKRIATCSGDGYCIIRTIDGKILHKYRHPAAVFGCDWSQNNKDMIATGCEDKNVRVYYVATSSDQPLKVFSGHTEKVFHVRWSPLREGTLCSGSDDGSVRIWDYTQDACINILSGHTAPVRGLMWNTEIPYLLISGSWDYTIKVWDTREGICLDTVCDHGADVYGLTCHPRRPFTMASCSRDSTVRLWSLTPLITPLQINILADRPWEEILGNTDSAIEQGAPPLLCGKVSRDIKQEIEKLSGNLRVKKLRWFSECLSPPGGSDNLWNLVAVIKGQDDSLLPQNYCKGIMHLKHLIKFRTSEAQELTTVKMSKFGGGIGVPTKEERLKEAAQIHLRLGQIQRYCELMVELGEWDKALSVAPSVSVKYWKKLMQRRADQLIQEDKDDVIPYCIAIGDVKKLVHFFMSRGQLKEALLVAQAACEGNMQTFHVSTPKGPSFSDDIYKEDFKELLQEACRELAEWYFQDGRAVLAACCHLAVDNIELAMAYLIRGNELELAVCVGTVLGEPAAPATHYALELLARKCMMIPAWDLAADLLLMTPDSELQLVKLCAFYPGCTEERNDLHEKCKLPTVEECMQLAETAHADGKIFETIKYYLLSQEPEKALPIGIDFIKEHISSSDWTLDTIYPVLDLLSYIRTEKLALHTCTEARNELLILCGYVGALLAIRRQYQSIVPALYEYTSQLLKRRKVSVPLKIEHLSEELDAWRACTQIVNPSSEDSPYTPPSDSQRLVYAALLKRLKEEPLRGIVGPDYVTGSNLPSHSDTHISCLTGLKIQGPVFFLEDGKSTISLNDALMWAKVNPFSPLGTGIRLNPF
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
location: join(7601347..7601412,7607832..7607960,7609172..7609355,7610891..7611121,7614297..7614548,7616401..7616523,7617936..7618120,7618733..7618901,7620831..7620922,7622720..7622802,7625273..7625359,7628635..7628799,7630497..7630699,7632087..7632236,7632324..7632454,7633217..7633342,7634825..7634980,7635885..7635949,7638971..7639103,7639553..7639644,7640894..7640993,7642177..7642316,7645479..7645590,7649831..7649972,7650246..7650348,7651195..7651296,7652645..7652743,7653056..7653239,7655595..7655714)
location: region:7601347-7655714:1
so has part: feature:7601347-7601412:1:exon
so has part: feature:7607832-7607960:1:exon
so has part: feature:7609172-7609355:1:exon
so has part: feature:7610891-7611121:1:exon
so has part: feature:7614297-7614548:1:exon
so has part: feature:7616401-7616523:1:exon
so has part: feature:7617936-7618120:1:exon
so has part: feature:7618733-7618901:1:exon
so has part: feature:7620831-7620922:1:exon
so has part: feature:7622720-7622802:1:exon
so has part: feature:7625273-7625359:1:exon
so has part: feature:7628635-7628799:1:exon
so has part: feature:7630497-7630699:1:exon
so has part: feature:7632087-7632236:1:exon
so has part: feature:7632324-7632454:1:exon
so has part: feature:7633217-7633342:1:exon
so has part: feature:7634825-7634980:1:exon
so has part: feature:7635885-7635949:1:exon
so has part: feature:7638971-7639103:1:exon
so has part: feature:7639553-7639644:1:exon
so has part: feature:7640894-7640993:1:exon
so has part: feature:7642177-7642316:1:exon
so has part: feature:7645479-7645590:1:exon
so has part: feature:7649831-7649972:1:exon
so has part: feature:7650246-7650348:1:exon
so has part: feature:7651195-7651296:1:exon
so has part: feature:7652645-7652743:1:exon
so has part: feature:7653056-7653239:1:exon
so has part: feature:7655595-7655714:1:exon

XP_027385693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7601347-7601412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7607832-7607960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7609172-7609355:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7610891-7611121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7614297-7614548:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7616401-7616523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7617936-7618120:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7618733-7618901:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7620831-7620922:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7622720-7622802:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7625273-7625359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7628635-7628799:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7630497-7630699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7632087-7632236:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7632324-7632454:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7633217-7633342:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7634825-7634980:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7635885-7635949:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7638971-7639103:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7639553-7639644:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7640894-7640993:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7642177-7642316:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7645479-7645590:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7649831-7649972:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7650246-7650348:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7651195-7651296:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7652645-7652743:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7653056-7653239:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7655595-7655714:1:exon

WDR17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: WDR17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 17 isoform X7
translation: MAWMTYISHWFEQDDWYEGLQRVNMSQVRQVGLLAAGCQPWNRDVCAASGDRFAYCATLAIYVYQLDHHYNEFKLHAIMSEHKKTITALSWCPHNPDLFASGSADNLVIIWNVAEQKVIAKLDSTKGTPASLSWCWNAGDAVAFASHRGPLFIWTISGPDSGVTVHRDAHSFLSDICMFRWHTQKKGKVAFGHVDGSLSIFQPGNKSQKHVLRPDSLEGTDEEDPVSALEWDPLSTDYLLVANLHHGIRLVDSESLCCITTFSFPSAAASVQCLAWVPSAPGMFITGDSQVGVLRIWNVSRTTPVDNFKLKKTGFHCLHVLNSPPRKKFSNQSPTKNHYTSSTSEAVPPPTLTQNQAFSLPPGHAVCCFLDGGVGLYDMGAKKWDFLRDLGHVETIFDCKFKPDNPNLLATASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGDLNCIAGATSRNGAFIWDIKKGKMIQRFNEHGKNGIFCIAWSHKDSKRIATCSGDGYCIIRTIDGKILHKYRHPAAVFGCDWSQNNKDMIATGCEDKNVRVYYVATSSDQPLKVFSGHTEKVFHVRWSPLREGTLCSGSDDGSVRIWDYTQDACINILSGHTAPVRGLMWNTEIPYLLISGSWDYTIKVWDTREGICLDTVCDHGADVYGLTCHPRRPFTMASCSRDSTVRLWSLTPLITPLQINILADRPWEEILGNTDSAIEQGAPPLLCGKVSRDIKQEIEKLSGNLRVKKLRWFSECLSPPGGSDNLWNLVAVIKGQDDSLLPQNYCKGIMHLKHLIKFRTWDKALSVAPSVSVKYWKKLMQRRADQLIQEDKDDVIPYCIAIGDVKKLVHFFMSRGQLKEALLVAQAACEGNMQTFHVSTPKGPSFSDDIYKEDFKELLQEACRELAEWYFQDGRAVLAACCHLAVDNIELAMAYLIRGNELELAVCVGTVLGEPAAPATHYALELLARKCMMIPACFPSVGYRDLAADLLLMTPDSELQLVKLCAFYPGCTEERNDLHEKCKLPTVEECMQLAETAHADGKIFETIKYYLLSQEPEKALPIGIDFIKEHISSSDWTLDTIYPVLDLLSYIRTEKLALHTCTEARNELLILCGYVGALLAIRRQYQSIVPALYEYTSQLLKRRKVSVPLKIEHLSEELDAWRACTQIVNPSSEDSPYTPPSDSQRLVYAALLKRLKEEPLRGIVGPDYVTGSNLPSHSDTHISCLTGLKIQGPVFFLEDGKSTISLNDALMWAKVNPFSPLGTGIRLNPF
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
location: join(7601347..7601412,7607832..7607960,7609172..7609355,7610891..7611121,7614297..7614548,7616401..7616523,7617936..7618120,7618733..7618901,7620831..7620922,7622720..7622802,7625273..7625359,7628635..7628799,7630497..7630699,7632087..7632236,7632324..7632454,7633217..7633342,7635885..7635949,7638971..7639103,7639553..7639644,7640894..7640993,7642177..7642316,7645268..7645288,7645479..7645590,7649831..7649972,7650246..7650348,7651195..7651296,7652645..7652743,7653056..7653239,7655595..7655714)
location: region:7601347-7655714:1
so has part: feature:7601347-7601412:1:exon
so has part: feature:7607832-7607960:1:exon
so has part: feature:7609172-7609355:1:exon
so has part: feature:7610891-7611121:1:exon
so has part: feature:7614297-7614548:1:exon
so has part: feature:7616401-7616523:1:exon
so has part: feature:7617936-7618120:1:exon
so has part: feature:7618733-7618901:1:exon
so has part: feature:7620831-7620922:1:exon
so has part: feature:7622720-7622802:1:exon
so has part: feature:7625273-7625359:1:exon
so has part: feature:7628635-7628799:1:exon
so has part: feature:7630497-7630699:1:exon
so has part: feature:7632087-7632236:1:exon
so has part: feature:7632324-7632454:1:exon
so has part: feature:7633217-7633342:1:exon
so has part: feature:7635885-7635949:1:exon
so has part: feature:7638971-7639103:1:exon
so has part: feature:7639553-7639644:1:exon
so has part: feature:7640894-7640993:1:exon
so has part: feature:7642177-7642316:1:exon
so has part: feature:7645268-7645288:1:exon
so has part: feature:7645479-7645590:1:exon
so has part: feature:7649831-7649972:1:exon
so has part: feature:7650246-7650348:1:exon
so has part: feature:7651195-7651296:1:exon
so has part: feature:7652645-7652743:1:exon
so has part: feature:7653056-7653239:1:exon
so has part: feature:7655595-7655714:1:exon

XP_027385698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7601347-7601412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7607832-7607960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7609172-7609355:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7610891-7611121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7614297-7614548:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7616401-7616523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7617936-7618120:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7618733-7618901:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7620831-7620922:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7622720-7622802:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7625273-7625359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7628635-7628799:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7630497-7630699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7632087-7632236:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7632324-7632454:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7633217-7633342:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7635885-7635949:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7638971-7639103:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7639553-7639644:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7640894-7640993:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7642177-7642316:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7645268-7645288:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7645479-7645590:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7649831-7649972:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7650246-7650348:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7651195-7651296:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7652645-7652743:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7653056-7653239:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7655595-7655714:1:exon

WDR17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: WDR17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 17 isoform X4
translation: MAWMTYISHWFEQDDWYEGLQRVNMSQVRQVGLLAAGCQPWNRDVCAASGDRFAYCATLAIYVYQLDHHYNEFKLHAIMSEHKKTITALSWCPHNPDLFASGSADNLVIIWNVAEQKVIAKLDSTKGTPASLSWCWNAGDAVAFASHRGPLFIWTISGPDSGVTVHRDAHSFLSDICMFRWHTQKKGKVAFGHVDGSLSIFQPGNKSQKHVLRPDSLEGTDEEDPVSALEWDPLSTDYLLVANLHHGIRLVDSESLCCITTFSFPSAAASVQCLAWVPSAPGMFITGDSQVGVLRIWNVSRTTPVDNFKLKKTGFHCLHVLNSPPRKKFSNQSPTKNHYTSSTSEAVPPPTLTQNQAFSLPPGHAVCCFLDGGVGLYDMGAKKWDFLRDLGHVETIFDCKFKPDNPNLLATASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGILHFLKHGKNGIFCIAWSHKDSKRIATCSGDGYCIIRTIDGKILHKYRHPAAVFGCDWSQNNKDMIATGCEDKNVRVYYVATSSDQPLKVFSGHTEKVFHVRWSPLREGTLCSGSDDGSVRIWDYTQDACINILSGHTAPVRGLMWNTEIPYLLISGSWDYTIKVWDTREGICLDTVCDHGADVYGLTCHPRRPFTMASCSRDSTVRLWSLTPLITPLQINILADRPWEEILGNTDSAIEQGAPPLLCGKVSRDIKQEIEKLSGNLRVKKLRWFSECLSPPGGSDNLWNLVAVIKGQDDSLLPQNYCKGIMHLKHLIKFRTSEAQELTTVKMSKFGGGIGVPTKEERLKEAAQIHLRLGQIQRYCELMVELGEWDKALSVAPSVSVKYWKKLMQRRADQLIQEDKDDVIPYCIAIGDVKKLVHFFMSRGQLKEALLVAQAACEGNMQTFHVSTPKGPSFSDDIYKEDFKELLQEACRELAEWYFQDGRAVLAACCHLAVDNIELAMAYLIRGNELELAVCVGTVLGEPAAPATHYALELLARKCMMIPACFPSVGYRDLAADLLLMTPDSELQLVKLCAFYPGCTEERNDLHEKCKLPTVEECMQLAETAHADGKIFETIKYYLLSQEPEKALPIGIDFIKEHISSSDWTLDTIYPVLDLLSYIRTEKLALHTCTEARNELLILCGYVGALLAIRRQYQSIVPALYEYTSQLLKRRKVSVPLKIEHLSEELDAWRACTQIVNPSSEDSPYTPPSDSQRLVYAALLKRLKEEPLRGIVGPDYVTGSNLPSHSDTHISCLTGLKIQGPVFFLEDGKSTISLNDALMWAKVNPFSPLGTGIRLNPF
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
location: join(7601347..7601412,7607832..7607960,7609172..7609355,7610891..7611121,7614297..7614548,7616401..7616523,7617936..7618120,7618733..7618901,7622700..7622802,7625273..7625359,7628635..7628799,7630497..7630699,7632087..7632236,7632324..7632454,7633217..7633342,7634825..7634980,7635885..7635949,7638971..7639103,7639553..7639644,7640894..7640993,7642177..7642316,7645268..7645288,7645479..7645590,7649831..7649972,7650246..7650348,7651195..7651296,7652645..7652743,7653056..7653239,7655595..7655714)
location: region:7601347-7655714:1
so has part: feature:7601347-7601412:1:exon
so has part: feature:7607832-7607960:1:exon
so has part: feature:7609172-7609355:1:exon
so has part: feature:7610891-7611121:1:exon
so has part: feature:7614297-7614548:1:exon
so has part: feature:7616401-7616523:1:exon
so has part: feature:7617936-7618120:1:exon
so has part: feature:7618733-7618901:1:exon
so has part: feature:7622700-7622802:1:exon
so has part: feature:7625273-7625359:1:exon
so has part: feature:7628635-7628799:1:exon
so has part: feature:7630497-7630699:1:exon
so has part: feature:7632087-7632236:1:exon
so has part: feature:7632324-7632454:1:exon
so has part: feature:7633217-7633342:1:exon
so has part: feature:7634825-7634980:1:exon
so has part: feature:7635885-7635949:1:exon
so has part: feature:7638971-7639103:1:exon
so has part: feature:7639553-7639644:1:exon
so has part: feature:7640894-7640993:1:exon
so has part: feature:7642177-7642316:1:exon
so has part: feature:7645268-7645288:1:exon
so has part: feature:7645479-7645590:1:exon
so has part: feature:7649831-7649972:1:exon
so has part: feature:7650246-7650348:1:exon
so has part: feature:7651195-7651296:1:exon
so has part: feature:7652645-7652743:1:exon
so has part: feature:7653056-7653239:1:exon
so has part: feature:7655595-7655714:1:exon

XP_027385695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7601347-7601412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7607832-7607960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7609172-7609355:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7610891-7611121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7614297-7614548:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7616401-7616523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7617936-7618120:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7618733-7618901:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7622700-7622802:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7625273-7625359:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7628635-7628799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7630497-7630699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7632087-7632236:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7632324-7632454:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7633217-7633342:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7634825-7634980:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7635885-7635949:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7638971-7639103:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7639553-7639644:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7640894-7640993:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7642177-7642316:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7645268-7645288:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7645479-7645590:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7649831-7649972:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7650246-7650348:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7651195-7651296:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7652645-7652743:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7653056-7653239:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7655595-7655714:1:exon

WDR17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: WDR17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 17 isoform X3
translation: MSQVRQVGLLAAGCQPWNRDVCAASGDRFAYCATLAIYVYQLDHHYNEFKLHAIMSEHKKTITALSWCPHNPDLFASGSADNLVIIWNVAEQKVIAKLDSTKGTPASLSWCWNAGDAVAFASHRGPLFIWTISGPDSGVTVHRDAHSFLSDICMFRWHTQKKGKVAFGHVDGSLSIFQPGNKSQKHVLRPDSLEGTDEEDPVSALEWDPLSTDYLLVANLHHGIRLVDSESLCCITTFSFPSAAASVQCLAWVPSAPGMFITGDSQVGVLRIWNVSRTTPVDNFKLKKTGFHCLHVLNSPPRKKFSNQSPTKNHYTSSTSEAVPPPTLTQNQAFSLPPGHAVCCFLDGGVGLYDMGAKKWDFLRDLGHVETIFDCKFKPDNPNLLATASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGDLNCIAGATSRNGAFIWDIKKGKMIQRFNEHGKNGIFCIAWSHKDSKRIATCSGDGYCIIRTIDGKILHKYRHPAAVFGCDWSQNNKDMIATGCEDKNVRVYYVATSSDQPLKVFSGHTEKVFHVRWSPLREGTLCSGSDDGSVRIWDYTQDACINILSGHTAPVRGLMWNTEIPYLLISGSWDYTIKVWDTREGICLDTVCDHGADVYGLTCHPRRPFTMASCSRDSTVRLWSLTPLITPLQINILADRPWEEILGNTDSAIEQGAPPLLCGKVSRDIKQEIEKLSGNLRVKKLRWFSECLSPPGGSDNLWNLVAVIKGQDDSLLPQNYCKGIMHLKHLIKFRTSEAQELTTVKMSKFGGGIGVPTKEERLKEAAQIHLRLGQIQRYCELMVELGEWDKALSVAPSVSVKYWKKLMQRRADQLIQEDKDDVIPYCIAIGDVKKLVHFFMSRGQLKEALLVAQAACEGNMQTFHVSTPKGPSFSDDIYKEDFKELLQEACRELAEWYFQDGRAVLAACCHLAVDNIELAMAYLIRGNELELAVCVGTVLGEPAAPATHYALELLARKCMMIPACFPSVGYRDLAADLLLMTPDSELQLVKLCAFYPGCTEERNDLHEKCKLPTVEECMQLAETAHADGKIFETIKYYLLSQEPEKALPIGIDFIKEHISSSDWTLDTIYPVLDLLSYIRTEKLALHTCTEARNELLILCGYVGALLAIRRQYQSIVPALYEYTSQLLKRRKVSVPLKIEHLSEELDAWRACTQIVNPSSEDSPYTPPSDSQRLVYAALLKRLKEEPLRGIVGPDYVTGSNLPSHSDTHISCLTGLKIQGPVFFLEDGKSTISLNDALMWAKVNPFSPLGTGIRLNPF
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
location: join(7607838..7607960,7609172..7609355,7610891..7611121,7614297..7614548,7616401..7616523,7617936..7618120,7618733..7618901,7620831..7620922,7622720..7622802,7625273..7625359,7628635..7628799,7630497..7630699,7632087..7632236,7632324..7632454,7633217..7633342,7634825..7634980,7635885..7635949,7638971..7639103,7639553..7639644,7640894..7640993,7642177..7642316,7645268..7645288,7645479..7645590,7649831..7649972,7650246..7650348,7651195..7651296,7652645..7652743,7653056..7653239,7655595..7655714)
location: region:7607838-7655714:1
so has part: feature:7607838-7607960:1:exon
so has part: feature:7609172-7609355:1:exon
so has part: feature:7610891-7611121:1:exon
so has part: feature:7614297-7614548:1:exon
so has part: feature:7616401-7616523:1:exon
so has part: feature:7617936-7618120:1:exon
so has part: feature:7618733-7618901:1:exon
so has part: feature:7620831-7620922:1:exon
so has part: feature:7622720-7622802:1:exon
so has part: feature:7625273-7625359:1:exon
so has part: feature:7628635-7628799:1:exon
so has part: feature:7630497-7630699:1:exon
so has part: feature:7632087-7632236:1:exon
so has part: feature:7632324-7632454:1:exon
so has part: feature:7633217-7633342:1:exon
so has part: feature:7634825-7634980:1:exon
so has part: feature:7635885-7635949:1:exon
so has part: feature:7638971-7639103:1:exon
so has part: feature:7639553-7639644:1:exon
so has part: feature:7640894-7640993:1:exon
so has part: feature:7642177-7642316:1:exon
so has part: feature:7645268-7645288:1:exon
so has part: feature:7645479-7645590:1:exon
so has part: feature:7649831-7649972:1:exon
so has part: feature:7650246-7650348:1:exon
so has part: feature:7651195-7651296:1:exon
so has part: feature:7652645-7652743:1:exon
so has part: feature:7653056-7653239:1:exon
so has part: feature:7655595-7655714:1:exon

XP_027385694.1
type: Protein
SIO_000068: ncbiprotein

position:7607838:1
position: 7607838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7607838-7607960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7609172-7609355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7610891-7611121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7614297-7614548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7616401-7616523:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7617936-7618120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7618733-7618901:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7620831-7620922:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7622720-7622802:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7625273-7625359:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7628635-7628799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7630497-7630699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7632087-7632236:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7632324-7632454:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7633217-7633342:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7634825-7634980:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7635885-7635949:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7638971-7639103:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7639553-7639644:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7640894-7640993:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7642177-7642316:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7645268-7645288:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7645479-7645590:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7649831-7649972:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7650246-7650348:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7651195-7651296:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7652645-7652743:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7653056-7653239:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7655595-7655714:1:exon

WDR17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: WDR17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 17 isoform X5
translation: MSQVRQVGLLAAGCQPWNRDVCAASGDRFAYCATLAIYVYQLDHHYNEFKLHAIMSEHKKTITALSWCPHNPDLFASGSADNLVIIWNVAEQKVIAKLDSTKGTPASLSWCWNAGDAVAFASHRGPLFIWTISGPDSGVTVHRDAHSFLSDICMFRWHTQKKGKVAFGHVDGSLSIFQPGNKSQKHVLRPDSLEGTDEEDPVSALEWDPLSTDYLLVANLHHGIRLVDSESLCCITTFSFPSAAASVQCLAWVPSAPGMFITGDSQVGVLRIWNVSRTTPVDNFKLKKTGFHCLHVLNSPPRKKFSNQSPTKNHYTSSTSEAVPPPTLTQNQAFSLPPGHAVCCFLDGGVGLYDMGAKKWDFLRDLGHVETIFDCKFKPDNPNLLATASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGDLNCIAGATSRNGAFIWDIKKGKMIQRFNEHGKNGIFCIAWSHKDSKRIATCSGDGYCIIRTIDGKILHKYRHPAAVFGCDWSQNNKDMIATGCEDKNVRVYYVATSSDQPLKVFSGHTEKVFHVRWSPLREGTLCSGSDDGSVRIWDYTQDACINILSGHTAPVRGLMWNTEIPYLLISGSWDYTIKVWDTREGICLDTVCDHGADVYGLTCHPRRPFTMASCSRDSTVRLWSLTPLITPLQINILADRPWEEILGNTDSAIEQGAPPLLCGKVSRDIKQEIEKLSGNLRVKKLRWFSECLSPPGGSDNLWNLVAVIKGQDDSLLPQNYCKGIMHLKHLIKFRTSEAQELTTVKMSKFGGGIGVPTKEERLKEAAQIHLRLGQIQRYCELMVELGEWDKALSVAPSVSVKYWKKLMQRRADQLIQEDKDDVIPYCIAIGDVKKLVHFFMSRGQLKEALLVAQAACEGNMQTFHVSTPKGPSFSDDIYKEDFKELLQEACRELAEWYFQDGRAVLAACCHLAVDNIELAMAYLIRGNELELAVCVGTVLGEPAAPATHYALELLARKCMMIPAWDLAADLLLMTPDSELQLVKLCAFYPGCTEERNDLHEKCKLPTVEECMQLAETAHADGKIFETIKYYLLSQEPEKALPIGIDFIKEHISSSDWTLDTIYPVLDLLSYIRTEKLALHTCTEARNELLILCGYVGALLAIRRQYQSIVPALYEYTSQLLKRRKVSVPLKIEHLSEELDAWRACTQIVNPSSEDSPYTPPSDSQRLVYAALLKRLKEEPLRGIVGPDYVTGSNLPSHSDTHISCLTGLKIQGPVFFLEDGKSTISLNDALMWAKVNPFSPLGTGIRLNPF
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
location: join(7607838..7607960,7609172..7609355,7610891..7611121,7614297..7614548,7616401..7616523,7617936..7618120,7618733..7618901,7620831..7620922,7622720..7622802,7625273..7625359,7628635..7628799,7630497..7630699,7632087..7632236,7632324..7632454,7633217..7633342,7634825..7634980,7635885..7635949,7638971..7639103,7639553..7639644,7640894..7640993,7642177..7642316,7645479..7645590,7649831..7649972,7650246..7650348,7651195..7651296,7652645..7652743,7653056..7653239,7655595..7655714)
location: region:7607838-7655714:1
so has part: feature:7607838-7607960:1:exon
so has part: feature:7609172-7609355:1:exon
so has part: feature:7610891-7611121:1:exon
so has part: feature:7614297-7614548:1:exon
so has part: feature:7616401-7616523:1:exon
so has part: feature:7617936-7618120:1:exon
so has part: feature:7618733-7618901:1:exon
so has part: feature:7620831-7620922:1:exon
so has part: feature:7622720-7622802:1:exon
so has part: feature:7625273-7625359:1:exon
so has part: feature:7628635-7628799:1:exon
so has part: feature:7630497-7630699:1:exon
so has part: feature:7632087-7632236:1:exon
so has part: feature:7632324-7632454:1:exon
so has part: feature:7633217-7633342:1:exon
so has part: feature:7634825-7634980:1:exon
so has part: feature:7635885-7635949:1:exon
so has part: feature:7638971-7639103:1:exon
so has part: feature:7639553-7639644:1:exon
so has part: feature:7640894-7640993:1:exon
so has part: feature:7642177-7642316:1:exon
so has part: feature:7645479-7645590:1:exon
so has part: feature:7649831-7649972:1:exon
so has part: feature:7650246-7650348:1:exon
so has part: feature:7651195-7651296:1:exon
so has part: feature:7652645-7652743:1:exon
so has part: feature:7653056-7653239:1:exon
so has part: feature:7655595-7655714:1:exon

XP_027385696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7607838-7607960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7609172-7609355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7610891-7611121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7614297-7614548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7616401-7616523:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7617936-7618120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7618733-7618901:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7620831-7620922:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7622720-7622802:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7625273-7625359:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7628635-7628799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7630497-7630699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7632087-7632236:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7632324-7632454:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7633217-7633342:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7634825-7634980:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7635885-7635949:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7638971-7639103:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7639553-7639644:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7640894-7640993:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7642177-7642316:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7645479-7645590:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7649831-7649972:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7650246-7650348:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7651195-7651296:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7652645-7652743:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7653056-7653239:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7655595-7655714:1:exon

WDR17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: WDR17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 17 isoform X8
translation: MSQVRQVGLLAAGCQPWNRDVCAASGDRFAYCATLAIYVYQLDHHYNEFKLHAIMSEHKKTITALSWCPHNPDLFASGSADNLVIIWNVAEQKVIAKLDSTKGTPASLSWCWNAGDAVAFASHRGPLFIWTISGPDSGVTVHRDAHSFLSDICMFRWHTQKKGKVAFGHVDGSLSIFQPGNKSQKHVLRPDSLEGTDEEDPVSALEWDPLSTDYLLVANLHHGIRLVDSESLCCITTFSFPSAAASVQCLAWVPSAPGMFITGDSQVGVLRIWNVSRTTPVDNFKLKKTGFHCLHVLNSPPRKKFSNQSPTKNHYTSSTSEAVPPPTLTQNQAFSLPPGHAVCCFLDGGVGLYDMGAKKWDFLRDLGHVETIFDCKFKPDNPNLLATASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGDLNCIAGATSRNGAFIWDIKKGKMIQRFNEHGKNGIFCIAWSHKDSKRIATCSGDGYCIIRTIDGKILHKYRHPAAVFGCDWSQNNKDMIATGCEDKNVRVYYVATSSDQPLKVFSGHTEKVFHVRWSPLREGTLCSGSDDGSVRIWDYTQDACINILSGHTAPVRGLMWNTEIPYLLISGSWDYTIKVWDTREGICLDTVCDHGADVYGLTCHPRRPFTMASCSRDSTVRLWSLTPLITPLQINILADRPWEEILGNTDSAIEQGAPPLLCGKVSRDIKQEIEKLSGNLRVKKLRWFSECLSPPGGSDNLWNLVAVIKGQDDSLLPQNYCKGIMHLKHLIKFRTWDKALSVAPSVSVKYWKKLMQRRADQLIQEDKDDVIPYCIAIGDVKKLVHFFMSRGQLKEALLVAQAACEGNMQTFHVSTPKGPSFSDDIYKEDFKELLQEACRELAEWYFQDGRAVLAACCHLAVDNIELAMAYLIRGNELELAVCVGTVLGEPAAPATHYALELLARKCMMIPACFPSVGYRDLAADLLLMTPDSELQLVKLCAFYPGCTEERNDLHEKCKLPTVEECMQLAETAHADGKIFETIKYYLLSQEPEKALPIGIDFIKEHISSSDWTLDTIYPVLDLLSYIRTEKLALHTCTEARNELLILCGYVGALLAIRRQYQSIVPALYEYTSQLLKRRKVSVPLKIEHLSEELDAWRACTQIVNPSSEDSPYTPPSDSQRLVYAALLKRLKEEPLRGIVGPDYVTGSNLPSHSDTHISCLTGLKIQGPVFFLEDGKSTISLNDALMWAKVNPFSPLGTGIRLNPF
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
location: join(7607838..7607960,7609172..7609355,7610891..7611121,7614297..7614548,7616401..7616523,7617936..7618120,7618733..7618901,7620831..7620922,7622720..7622802,7625273..7625359,7628635..7628799,7630497..7630699,7632087..7632236,7632324..7632454,7633217..7633342,7635885..7635949,7638971..7639103,7639553..7639644,7640894..7640993,7642177..7642316,7645268..7645288,7645479..7645590,7649831..7649972,7650246..7650348,7651195..7651296,7652645..7652743,7653056..7653239,7655595..7655714)
location: region:7607838-7655714:1
so has part: feature:7607838-7607960:1:exon
so has part: feature:7609172-7609355:1:exon
so has part: feature:7610891-7611121:1:exon
so has part: feature:7614297-7614548:1:exon
so has part: feature:7616401-7616523:1:exon
so has part: feature:7617936-7618120:1:exon
so has part: feature:7618733-7618901:1:exon
so has part: feature:7620831-7620922:1:exon
so has part: feature:7622720-7622802:1:exon
so has part: feature:7625273-7625359:1:exon
so has part: feature:7628635-7628799:1:exon
so has part: feature:7630497-7630699:1:exon
so has part: feature:7632087-7632236:1:exon
so has part: feature:7632324-7632454:1:exon
so has part: feature:7633217-7633342:1:exon
so has part: feature:7635885-7635949:1:exon
so has part: feature:7638971-7639103:1:exon
so has part: feature:7639553-7639644:1:exon
so has part: feature:7640894-7640993:1:exon
so has part: feature:7642177-7642316:1:exon
so has part: feature:7645268-7645288:1:exon
so has part: feature:7645479-7645590:1:exon
so has part: feature:7649831-7649972:1:exon
so has part: feature:7650246-7650348:1:exon
so has part: feature:7651195-7651296:1:exon
so has part: feature:7652645-7652743:1:exon
so has part: feature:7653056-7653239:1:exon
so has part: feature:7655595-7655714:1:exon

XP_027385701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7607838-7607960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7609172-7609355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7610891-7611121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7614297-7614548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7616401-7616523:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7617936-7618120:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7618733-7618901:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7620831-7620922:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7622720-7622802:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7625273-7625359:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7628635-7628799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7630497-7630699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7632087-7632236:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7632324-7632454:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7633217-7633342:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7635885-7635949:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7638971-7639103:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7639553-7639644:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7640894-7640993:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7642177-7642316:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7645268-7645288:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7645479-7645590:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7649831-7649972:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7650246-7650348:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7651195-7651296:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7652645-7652743:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7653056-7653239:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7655595-7655714:1:exon

LOC113885027
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7657805..7659691)
location: region:7657805-7659691:-1
so has part: feature:7657805-7659691:-1:exon
subclass of: SO_0000011

113885027
type: Gene
SIO_000068: ncbigene

position:7657805:-1
position: 7657805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7659691:-1
position: 7659691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7657805-7659691:-1:exon

LOC113885027
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113885027
product: uncharacterized LOC113885027
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_003509103.1
SIO_010081: LOC113885027
subclass of: SO_0000673
so part of: LOC113885027
location: complement(join(7657805..7658020,7659201..7659691))
location: region:7657805-7659691:-1
so has part: feature:7659201-7659691:-1:exon
so has part: feature:7657805-7658020:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7659201-7659691:-1:exon

position:7659201:-1
position: 7659201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7657805-7658020:-1:exon

position:7658020:-1
position: 7658020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPATA4
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: SPATA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7661281..7666882)
location: region:7661281-7666882:-1
so has part: feature:7661281-7666882:-1:exon
subclass of: SO_0000010

113884799
type: Gene
SIO_000068: ncbigene

position:7661281:-1
position: 7661281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7666882:-1
position: 7666882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7661281-7666882:-1:exon

SPATA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SPATA4
product: spermatogenesis associated 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027529748.1
SIO_010081: SPATA4
subclass of: SO_0000673
so part of: SPATA4
location: complement(join(7661281..7661405,7661569..7661685,7663787..7664007,7664115..7664233,7664602..7664731,7666647..7666882))
location: region:7661281-7666882:-1
so has part: feature:7666647-7666882:-1:exon
so has part: feature:7664602-7664731:-1:exon
so has part: feature:7664115-7664233:-1:exon
so has part: feature:7663787-7664007:-1:exon
so has part: feature:7661569-7661685:-1:exon
so has part: feature:7661281-7661405:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7666647-7666882:-1:exon

position:7666647:-1
position: 7666647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7664602-7664731:-1:exon

position:7664602:-1
position: 7664602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7664731:-1
position: 7664731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7664115-7664233:-1:exon

position:7664115:-1
position: 7664115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7664233:-1
position: 7664233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7663787-7664007:-1:exon

position:7663787:-1
position: 7663787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7664007:-1
position: 7664007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7661569-7661685:-1:exon

position:7661569:-1
position: 7661569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7661685:-1
position: 7661685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7661281-7661405:-1:exon

position:7661405:-1
position: 7661405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPATA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SPATA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 4
translation: MAAAGPRGGLLTQPAAARPKTRSVLPCQAAPNGEKPKKCLVYPHPPKSSRLSRSVLRWLQSLDLTFFPRNISRDFSNGFLIAEIFTTYYPWDLKLSSFKNGTSLKVKLDNWAQLEKFLARKKLKLPKELIHGTIHCKAGVPEILIQEVYTLLTHREIKSIQEDLVNFTDYSYQMQLPLVPRSTASKSIKDNIRLSELIGNPNKLNNELKVEFLFLLQMLQRKLSRKLNPKWFAVKPTVGESTLDHRPAKASGNKSNSVVSKERPAPVCCAASVSTSRAKKQSKQGKPPSQGAPTFFYMSHPNTDFCLKK
SIO_010081: SPATA4
subclass of: SO_0000673
so part of: SPATA4
location: complement(join(7661281..7661405,7661569..7661685,7663787..7664007,7664115..7664233,7664602..7664731,7666647..7666864))
location: region:7661281-7666864:-1
so has part: feature:7666647-7666864:-1:exon
so has part: feature:7664602-7664731:-1:exon
so has part: feature:7664115-7664233:-1:exon
so has part: feature:7663787-7664007:-1:exon
so has part: feature:7661569-7661685:-1:exon
so has part: feature:7661281-7661405:-1:exon

XP_027385549.1
type: Protein
SIO_000068: ncbiprotein

position:7666864:-1
position: 7666864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7666647-7666864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7664602-7664731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7664115-7664233:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7663787-7664007:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7661569-7661685:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7661281-7661405:-1:exon

ASB5
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: ASB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7675304..7716152)
location: region:7675304-7716152:-1
so has part: feature:7675304-7716152:-1:exon
subclass of: SO_0000010

113884921
type: Gene
SIO_000068: ncbigene

position:7675304:-1
position: 7675304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7716152:-1
position: 7716152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7675304-7716152:-1:exon

ASB5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ASB5
product: ankyrin repeat and SOCS box containing 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 28 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_027530029.1
SIO_010081: ASB5
subclass of: SO_0000673
so part of: ASB5
location: complement(join(7675304..7677240,7678281..7678472,7681094..7681228,7681400..7681550,7682291..7682398,7685565..7685644,7715835..7716152))
location: region:7675304-7716152:-1
so has part: feature:7715835-7716152:-1:exon
so has part: feature:7685565-7685644:-1:exon
so has part: feature:7682291-7682398:-1:exon
so has part: feature:7681400-7681550:-1:exon
so has part: feature:7681094-7681228:-1:exon
so has part: feature:7678281-7678472:-1:exon
so has part: feature:7675304-7677240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7715835-7716152:-1:exon

position:7715835:-1
position: 7715835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7685565-7685644:-1:exon

position:7685565:-1
position: 7685565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7685644:-1
position: 7685644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7682291-7682398:-1:exon

position:7682291:-1
position: 7682291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7682398:-1
position: 7682398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7681400-7681550:-1:exon

position:7681400:-1
position: 7681400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7681550:-1
position: 7681550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7681094-7681228:-1:exon

position:7681094:-1
position: 7681094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7681228:-1
position: 7681228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7678281-7678472:-1:exon

position:7678281:-1
position: 7678281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7678472:-1
position: 7678472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7675304-7677240:-1:exon

position:7677240:-1
position: 7677240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASB5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ASB5
product: ankyrin repeat and SOCS box containing 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_027530030.1
SIO_010081: ASB5
subclass of: SO_0000673
so part of: ASB5
location: complement(join(7675304..7677240,7678281..7678472,7681094..7681228,7681400..7681550,7682291..7682398,7685565..7685644,7688686..7688725))
location: region:7675304-7688725:-1
so has part: feature:7688686-7688725:-1:exon
so has part: feature:7685565-7685644:-1:exon
so has part: feature:7682291-7682398:-1:exon
so has part: feature:7681400-7681550:-1:exon
so has part: feature:7681094-7681228:-1:exon
so has part: feature:7678281-7678472:-1:exon
so has part: feature:7675304-7677240:-1:exon

position:7688725:-1
position: 7688725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7688686-7688725:-1:exon

position:7688686:-1
position: 7688686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7685565-7685644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7682291-7682398:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7681400-7681550:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7681094-7681228:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7678281-7678472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7675304-7677240:-1:exon

ASB5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ASB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 5 isoform X1
translation: MSMVEENRPFAQQLSNVYFTILSLFCFKLFVKISLAILSHFYIVKGNRKEAARIAAEFYGVTQGRGSWADRSPLHEAASQGRLLALRTLLSQGYNVNAVTIDHVTPLHEACLGDHVACARTLLQAGANVNAITIDGVTPLFNACSQGSTSCTELLLEYGAKPQLESCLPSPTHEAASKGHHECLEILISWGVDVDQDIPHLGTPLYVACMSQQFHCVRKLLYAGADVQKGKYWDTPLHAAAQQSCTEIVNLLLEFGADINAKNTDLLRPVDVATSNSLVERLLLQHEATPSSLCQLCRLCIRNYIGRPRLHLIPQLQLPTLLQNFLQYR
SIO_010081: ASB5
subclass of: SO_0000673
so part of: ASB5
location: complement(join(7677113..7677240,7678281..7678472,7681094..7681228,7681400..7681550,7682291..7682398,7685565..7685644,7715835..7716030))
location: region:7677113-7716030:-1
so has part: feature:7715835-7716030:-1:exon
so has part: feature:7685565-7685644:-1:exon
so has part: feature:7682291-7682398:-1:exon
so has part: feature:7681400-7681550:-1:exon
so has part: feature:7681094-7681228:-1:exon
so has part: feature:7678281-7678472:-1:exon
so has part: feature:7677113-7677240:-1:exon

XP_027385830.1
type: Protein
SIO_000068: ncbiprotein

position:7677113:-1
position: 7677113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7716030:-1
position: 7716030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7715835-7716030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7685565-7685644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7682291-7682398:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7681400-7681550:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7681094-7681228:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7678281-7678472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7677113-7677240:-1:exon

ASB5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ASB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 5 isoform X2
translation: MPWGDGDLGSWADRSPLHEAASQGRLLALRTLLSQGYNVNAVTIDHVTPLHEACLGDHVACARTLLQAGANVNAITIDGVTPLFNACSQGSTSCTELLLEYGAKPQLESCLPSPTHEAASKGHHECLEILISWGVDVDQDIPHLGTPLYVACMSQQFHCVRKLLYAGADVQKGKYWDTPLHAAAQQSCTEIVNLLLEFGADINAKNTDLLRPVDVATSNSLVERLLLQHEATPSSLCQLCRLCIRNYIGRPRLHLIPQLQLPTLLQNFLQYR
SIO_010081: ASB5
subclass of: SO_0000673
so part of: ASB5
location: complement(join(7677113..7677240,7678281..7678472,7681094..7681228,7681400..7681550,7682291..7682398,7685565..7685644,7688686..7688710))
location: region:7677113-7688710:-1
so has part: feature:7688686-7688710:-1:exon
so has part: feature:7685565-7685644:-1:exon
so has part: feature:7682291-7682398:-1:exon
so has part: feature:7681400-7681550:-1:exon
so has part: feature:7681094-7681228:-1:exon
so has part: feature:7678281-7678472:-1:exon
so has part: feature:7677113-7677240:-1:exon

XP_027385831.1
type: Protein
SIO_000068: ncbiprotein

position:7688710:-1
position: 7688710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7688686-7688710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7685565-7685644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7682291-7682398:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7681400-7681550:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7681094-7681228:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7678281-7678472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7677113-7677240:-1:exon

SPCS3
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: SPCS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7732200..7741312
location: region:7732200-7741312:1
so has part: feature:7732200-7741312:1:exon
subclass of: SO_0000010

113884812
type: Gene
SIO_000068: ncbigene

position:7732200:1
position: 7732200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7741312:1
position: 7741312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7732200-7741312:1:exon

SPCS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SPCS3
product: signal peptidase complex subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 96 ESTs, 6 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 218 samples with support for all annotated introns
transcript id: XM_027529783.1
SIO_010081: SPCS3
subclass of: SO_0000673
so part of: SPCS3
location: join(7732200..7732492,7733862..7733935,7736112..7736188,7736779..7736894,7737829..7741312)
location: region:7732200-7741312:1
so has part: feature:7732200-7732492:1:exon
so has part: feature:7733862-7733935:1:exon
so has part: feature:7736112-7736188:1:exon
so has part: feature:7736779-7736894:1:exon
so has part: feature:7737829-7741312:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7732200-7732492:1:exon

position:7732492:1
position: 7732492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7733862-7733935:1:exon

position:7733862:1
position: 7733862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7733935:1
position: 7733935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7736112-7736188:1:exon

position:7736112:1
position: 7736112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7736188:1
position: 7736188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7736779-7736894:1:exon

position:7736779:1
position: 7736779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7736894:1
position: 7736894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7737829-7741312:1:exon

position:7737829:1
position: 7737829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPCS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SPCS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptidase complex subunit 3
translation: MNTVLSRANSLFAFSLSVMAALTFGCFITTAFKDRSVPVRLHVSRIMLKNVEDFTGPRERSDLGFITFDITADLENIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIVLRGDNPKLLLKDMKTKYFFFDDGNGLKGNRNVTLTLSWNVVPNAGILPLVTGSGHVSVPFPDTYEITKSY
SIO_010081: SPCS3
subclass of: SO_0000673
so part of: SPCS3
location: join(7732350..7732492,7733862..7733935,7736112..7736188,7736779..7736894,7737829..7737961)
location: region:7732350-7737961:1
so has part: feature:7732350-7732492:1:exon
so has part: feature:7733862-7733935:1:exon
so has part: feature:7736112-7736188:1:exon
so has part: feature:7736779-7736894:1:exon
so has part: feature:7737829-7737961:1:exon

XP_027385584.1
type: Protein
SIO_000068: ncbiprotein

position:7732350:1
position: 7732350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7737961:1
position: 7737961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7732350-7732492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7733862-7733935:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7736112-7736188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7736779-7736894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7737829-7737961:1:exon

LOC113885103
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885103
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7878080..7878186)
location: region:7878080-7878186:-1
so has part: feature:7878080-7878186:-1:exon
subclass of: SO_0000623

113885103
type: Gene
SIO_000068: ncbigene

position:7878080:-1
position: 7878080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7878186:-1
position: 7878186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7878080-7878186:-1:exon

LOC113885103
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: snRNA
gene: LOC113885103
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509144.1
SIO_010081: LOC113885103
subclass of: SO_0000673
so part of: LOC113885103
location: complement(7878080..7878186)
location: region:7878080-7878186:-1
so has part: feature:7878080-7878186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7878080-7878186:-1:exon

TRNAW-CCA
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TRNAW-CCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(7894628..7894699)
location: region:7894628-7894699:-1
so has part: feature:7894628-7894699:-1:exon
subclass of: SO_0000663

113885141
type: Gene
SIO_000068: ncbigene

position:7894628:-1
position: 7894628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7894699:-1
position: 7894699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7894628-7894699:-1:exon

TRNAW-CCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30522
gene: TRNAW-CCA
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tryptophan (anticodon CCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(7894664..7894666),aa:Trp, seq:cca)
SIO_010081: TRNAW-CCA
subclass of: SO_0000673
so part of: TRNAW-CCA
location: complement(7894628..7894699)
location: region:7894628-7894699:-1
so has part: feature:7894628-7894699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7894628-7894699:-1:exon

LOC113885098
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885098
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7955686..7955792)
location: region:7955686-7955792:-1
so has part: feature:7955686-7955792:-1:exon
subclass of: SO_0000623

113885098
type: Gene
SIO_000068: ncbigene

position:7955686:-1
position: 7955686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7955792:-1
position: 7955792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7955686-7955792:-1:exon

LOC113885098
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: snRNA
gene: LOC113885098
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509139.1
SIO_010081: LOC113885098
subclass of: SO_0000673
so part of: LOC113885098
location: complement(7955686..7955792)
location: region:7955686-7955792:-1
so has part: feature:7955686-7955792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7955686-7955792:-1:exon

VEGFC
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: VEGFC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7972987..8058636)
location: region:7972987-8058636:-1
so has part: feature:7972987-8058636:-1:exon
subclass of: SO_0000010

113884875
type: Gene
SIO_000068: ncbigene

position:7972987:-1
position: 7972987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8058636:-1
position: 8058636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7972987-8058636:-1:exon

VEGFC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: VEGFC
product: vascular endothelial growth factor C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 117 samples with support for all annotated introns
transcript id: XM_027529937.1
SIO_010081: VEGFC
subclass of: SO_0000673
so part of: VEGFC
location: complement(join(7972987..7973483,7976335..7976668,7976955..7977061,7984869..7985020,7999050..7999240,8000937..8001150,8058172..8058636))
location: region:7972987-8058636:-1
so has part: feature:8058172-8058636:-1:exon
so has part: feature:8000937-8001150:-1:exon
so has part: feature:7999050-7999240:-1:exon
so has part: feature:7984869-7985020:-1:exon
so has part: feature:7976955-7977061:-1:exon
so has part: feature:7976335-7976668:-1:exon
so has part: feature:7972987-7973483:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8058172-8058636:-1:exon

position:8058172:-1
position: 8058172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8000937-8001150:-1:exon

position:8000937:-1
position: 8000937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8001150:-1
position: 8001150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7999050-7999240:-1:exon

position:7999050:-1
position: 7999050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7999240:-1
position: 7999240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7984869-7985020:-1:exon

position:7984869:-1
position: 7984869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7985020:-1
position: 7985020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7976955-7977061:-1:exon

position:7976955:-1
position: 7976955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7977061:-1
position: 7977061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7976335-7976668:-1:exon

position:7976335:-1
position: 7976335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7976668:-1
position: 7976668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7972987-7973483:-1:exon

position:7973483:-1
position: 7973483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VEGFC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: VEGFC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial growth factor C
translation: MHLLGFCSVACSLLAAALLPGPRRAPAAAAAAAFESGLGFSDTEPDAGENKAYAGKEMEEQLRSVSSVDELMTVLYPEYWKMYKCQLRKGGWQHSTEQANTNIRTGETLKFAAAHYNTEILRSIDNEWRKTQCMPREVCIDVGKEFGAATNTFFKPPCVSVYRCGGCCNSEGQQCMNTSTSYLSKTLFEITVPLSQGPKPVTISFANHTSCRCMSKLDVYRQVHSIIRRSLPAALPQCQAANKTCPADYIWNNHVCRCLAQHDFIFSPSAGDDSADGFHDICGPNKELDEETCQCVCKGGLQASSCGPHKELDRDSCQCVCKNKLFPSSCGANREFDENTCQCICKKTCPRNQPLNPGKCACECTENPQKCFLKGKKFQHQTCSCYRRPCTNRVKHCEQGLSFSEEVCRCVPSYWKRPHVN
SIO_010081: VEGFC
subclass of: SO_0000673
so part of: VEGFC
location: complement(join(7973369..7973483,7976335..7976668,7976955..7977061,7984869..7985020,7999050..7999240,8000937..8001150,8058172..8058324))
location: region:7973369-8058324:-1
so has part: feature:8058172-8058324:-1:exon
so has part: feature:8000937-8001150:-1:exon
so has part: feature:7999050-7999240:-1:exon
so has part: feature:7984869-7985020:-1:exon
so has part: feature:7976955-7977061:-1:exon
so has part: feature:7976335-7976668:-1:exon
so has part: feature:7973369-7973483:-1:exon

XP_027385738.1
type: Protein
SIO_000068: ncbiprotein

position:7973369:-1
position: 7973369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8058324:-1
position: 8058324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8058172-8058324:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8000937-8001150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7999050-7999240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7984869-7985020:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7976955-7977061:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7976335-7976668:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7973369-7973483:-1:exon

LOC113884876
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8058486..8115699
location: region:8058486-8115699:1
so has part: feature:8058486-8115699:1:exon
subclass of: SO_0000011

113884876
type: Gene
SIO_000068: ncbigene

position:8058486:1
position: 8058486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8115699:1
position: 8115699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8058486-8115699:1:exon

LOC113884876
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884876
product: uncharacterized LOC113884876, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003509036.1
SIO_010081: LOC113884876
subclass of: SO_0000673
so part of: LOC113884876
location: join(8058486..8058558,8060507..8060620,8062338..8062471,8115622..8115699)
location: region:8058486-8115699:1
so has part: feature:8058486-8058558:1:exon
so has part: feature:8060507-8060620:1:exon
so has part: feature:8062338-8062471:1:exon
so has part: feature:8115622-8115699:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8058486-8058558:1:exon

position:8058558:1
position: 8058558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8060507-8060620:1:exon

position:8060507:1
position: 8060507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8060620:1
position: 8060620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8062338-8062471:1:exon

position:8062338:1
position: 8062338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8062471:1
position: 8062471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8115622-8115699:1:exon

position:8115622:1
position: 8115622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884876
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113884876
product: uncharacterized LOC113884876, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003509037.1
SIO_010081: LOC113884876
subclass of: SO_0000673
so part of: LOC113884876
location: join(8058486..8058558,8060507..8060620,8062338..8062471,8064034..8064113)
location: region:8058486-8064113:1
so has part: feature:8058486-8058558:1:exon
so has part: feature:8060507-8060620:1:exon
so has part: feature:8062338-8062471:1:exon
so has part: feature:8064034-8064113:1:exon

position:8064113:1
position: 8064113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8058486-8058558:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8060507-8060620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8062338-8062471:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8064034-8064113:1:exon

position:8064034:1
position: 8064034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113884836
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113884836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8310763..8312568)
location: region:8310763-8312568:-1
so has part: feature:8310763-8312568:-1:exon

113884836
type: Gene
SIO_000068: ncbigene

position:8310763:-1
position: 8310763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8312568:-1
position: 8312568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8310763-8312568:-1:exon

LOC113884836
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: LOC113884836
product: eukaryotic translation initiation factor 3 subunit C pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 16 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_003509025.1
SIO_010081: LOC113884836
so part of: LOC113884836
location: complement(8310763..8312568)
location: region:8310763-8312568:-1
so has part: feature:8310763-8312568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8310763-8312568:-1:exon

NEIL3
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: NEIL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8529688..8575952
location: region:8529688-8575952:1
so has part: feature:8529688-8575952:1:exon
subclass of: SO_0000010

113884962
type: Gene
SIO_000068: ncbigene

position:8529688:1
position: 8529688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8575952:1
position: 8575952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8529688-8575952:1:exon

NEIL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: NEIL3
product: nei like DNA glycosylase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_027530064.1
SIO_010081: NEIL3
subclass of: SO_0000673
so part of: NEIL3
location: join(8529688..8529961,8544835..8544962,8551777..8551911,8552216..8552429,8558503..8558577,8560317..8560483,8566072..8566241,8567691..8568108,8574076..8574250,8575596..8575952)
location: region:8529688-8575952:1
so has part: feature:8529688-8529961:1:exon
so has part: feature:8544835-8544962:1:exon
so has part: feature:8551777-8551911:1:exon
so has part: feature:8552216-8552429:1:exon
so has part: feature:8558503-8558577:1:exon
so has part: feature:8560317-8560483:1:exon
so has part: feature:8566072-8566241:1:exon
so has part: feature:8567691-8568108:1:exon
so has part: feature:8574076-8574250:1:exon
so has part: feature:8575596-8575952:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8529688-8529961:1:exon

position:8529961:1
position: 8529961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8544835-8544962:1:exon

position:8544835:1
position: 8544835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8544962:1
position: 8544962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8551777-8551911:1:exon

position:8551777:1
position: 8551777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8551911:1
position: 8551911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8552216-8552429:1:exon

position:8552216:1
position: 8552216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8552429:1
position: 8552429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8558503-8558577:1:exon

position:8558503:1
position: 8558503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8558577:1
position: 8558577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8560317-8560483:1:exon

position:8560317:1
position: 8560317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8560483:1
position: 8560483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8566072-8566241:1:exon

position:8566072:1
position: 8566072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8566241:1
position: 8566241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8567691-8568108:1:exon

position:8567691:1
position: 8567691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8568108:1
position: 8568108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8574076-8574250:1:exon

position:8574076:1
position: 8574076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8574250:1
position: 8574250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8575596-8575952:1:exon

position:8575596:1
position: 8575596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NEIL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: NEIL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endonuclease 8-like 3 isoform X1
translation: MVEGPGCTLNGEKIRARVRPGQAVTDVRGRALQGLGGPGSPPAASGPVGSSQAAALNNNKNSSHDFLRLFNGHGYSGVETLGKELFMYFGPNALRIHFGMKGSLVINPLESKNKNGVSPVFEVQLTKDLICFFDSSVEIRNSTESQQRIRVMEELDVCSPRFSFSRAESEVKKQKGRMLCDVLMDQKVLPGVGNIIKNEALFDSGFHPSVKVCQLTDEQIHHLVKMIRNFSILFYRCCKVGSALSKHYKVYKRPNCGQCCCKITVCRLGENNRMTYFCPHCQKENPQHVDIRMLPVRNTTVNWPSSRERHLMDCVAQKSEEQWTCEVCTLINKPSSKTCDACLTSRPADSVLRNEGNPIVFNNLMKYPCNSFGKSKAKVKINRKTAFGTTALVLTDFSNKHSALEREESHSHIPDGEFPSPPPNVCGSDTLNTSKERTNCRSQPSDKVNISPVVCSQYKLFSPAHKKLKTTHYSSPDLKSCNPGFSNSELQSSMTDGPCLLNAGSPRCSKHGRPCALRVVRKSGENKGRHFYACPLAREAQCGFFEWADLSFPFCIHGKRSIMRTVLKIGPNNGKNFFVCPLGKEKQCNFFQWAQNGPGINIIPGC
SIO_010081: NEIL3
subclass of: SO_0000673
so part of: NEIL3
location: join(8529806..8529961,8544835..8544962,8551777..8551911,8552216..8552429,8558503..8558577,8560317..8560483,8566072..8566241,8567691..8568108,8574076..8574250,8575596..8575778)
location: region:8529806-8575778:1
so has part: feature:8529806-8529961:1:exon
so has part: feature:8544835-8544962:1:exon
so has part: feature:8551777-8551911:1:exon
so has part: feature:8552216-8552429:1:exon
so has part: feature:8558503-8558577:1:exon
so has part: feature:8560317-8560483:1:exon
so has part: feature:8566072-8566241:1:exon
so has part: feature:8567691-8568108:1:exon
so has part: feature:8574076-8574250:1:exon
so has part: feature:8575596-8575778:1:exon

XP_027385865.1
type: Protein
SIO_000068: ncbiprotein

position:8529806:1
position: 8529806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8575778:1
position: 8575778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8529806-8529961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8544835-8544962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8551777-8551911:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8552216-8552429:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8558503-8558577:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8560317-8560483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8566072-8566241:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8567691-8568108:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8574076-8574250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8575596-8575778:1:exon

NEIL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: NEIL3
product: nei like DNA glycosylase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_027530065.1
SIO_010081: NEIL3
subclass of: SO_0000673
so part of: NEIL3
location: join(8533281..8533443,8544835..8544962,8551777..8551911,8552216..8552429,8558503..8558577,8560317..8560483,8566072..8566241,8567691..8568108,8574076..8574250,8575596..8575947)
location: region:8533281-8575947:1
so has part: feature:8533281-8533443:1:exon
so has part: feature:8544835-8544962:1:exon
so has part: feature:8551777-8551911:1:exon
so has part: feature:8552216-8552429:1:exon
so has part: feature:8558503-8558577:1:exon
so has part: feature:8560317-8560483:1:exon
so has part: feature:8566072-8566241:1:exon
so has part: feature:8567691-8568108:1:exon
so has part: feature:8574076-8574250:1:exon
so has part: feature:8575596-8575947:1:exon

position:8533281:1
position: 8533281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8575947:1
position: 8575947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8533281-8533443:1:exon

position:8533443:1
position: 8533443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8544835-8544962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8551777-8551911:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8552216-8552429:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8558503-8558577:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8560317-8560483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8566072-8566241:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8567691-8568108:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8574076-8574250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8575596-8575947:1:exon

NEIL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: NEIL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endonuclease 8-like 3 isoform X2
translation: MAAALNNNKNSSHDFLRLFNGHGYSGVETLGKELFMYFGPNALRIHFGMKGSLVINPLESKNKNGVSPVFEVQLTKDLICFFDSSVEIRNSTESQQRIRVMEELDVCSPRFSFSRAESEVKKQKGRMLCDVLMDQKVLPGVGNIIKNEALFDSGFHPSVKVCQLTDEQIHHLVKMIRNFSILFYRCCKVGSALSKHYKVYKRPNCGQCCCKITVCRLGENNRMTYFCPHCQKENPQHVDIRMLPVRNTTVNWPSSRERHLMDCVAQKSEEQWTCEVCTLINKPSSKTCDACLTSRPADSVLRNEGNPIVFNNLMKYPCNSFGKSKAKVKINRKTAFGTTALVLTDFSNKHSALEREESHSHIPDGEFPSPPPNVCGSDTLNTSKERTNCRSQPSDKVNISPVVCSQYKLFSPAHKKLKTTHYSSPDLKSCNPGFSNSELQSSMTDGPCLLNAGSPRCSKHGRPCALRVVRKSGENKGRHFYACPLAREAQCGFFEWADLSFPFCIHGKRSIMRTVLKIGPNNGKNFFVCPLGKEKQCNFFQWAQNGPGINIIPGC
SIO_010081: NEIL3
subclass of: SO_0000673
so part of: NEIL3
location: join(8533441..8533443,8544835..8544962,8551777..8551911,8552216..8552429,8558503..8558577,8560317..8560483,8566072..8566241,8567691..8568108,8574076..8574250,8575596..8575778)
location: region:8533441-8575778:1
so has part: feature:8533441-8533443:1:exon
so has part: feature:8544835-8544962:1:exon
so has part: feature:8551777-8551911:1:exon
so has part: feature:8552216-8552429:1:exon
so has part: feature:8558503-8558577:1:exon
so has part: feature:8560317-8560483:1:exon
so has part: feature:8566072-8566241:1:exon
so has part: feature:8567691-8568108:1:exon
so has part: feature:8574076-8574250:1:exon
so has part: feature:8575596-8575778:1:exon

XP_027385866.1
type: Protein
SIO_000068: ncbiprotein

position:8533441:1
position: 8533441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8533441-8533443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8544835-8544962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8551777-8551911:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8552216-8552429:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8558503-8558577:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8560317-8560483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8566072-8566241:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8567691-8568108:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8574076-8574250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8575596-8575778:1:exon

AGA
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: AGA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8640712..8652897)
location: region:8640712-8652897:-1
so has part: feature:8640712-8652897:-1:exon
subclass of: SO_0000010

113884868
type: Gene
SIO_000068: ncbigene

position:8640712:-1
position: 8640712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8652897:-1
position: 8652897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8640712-8652897:-1:exon

AGA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: AGA
product: aspartylglucosaminidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 ESTs, 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 209 samples with support for all annotated introns
transcript id: XM_027529927.1
SIO_010081: AGA
subclass of: SO_0000673
so part of: AGA
location: complement(join(8640712..8641720,8643056..8643189,8643903..8644010,8644822..8644897,8645522..8645636,8647092..8647204,8648117..8648229,8649130..8649283,8652672..8652897))
location: region:8640712-8652897:-1
so has part: feature:8652672-8652897:-1:exon
so has part: feature:8649130-8649283:-1:exon
so has part: feature:8648117-8648229:-1:exon
so has part: feature:8647092-8647204:-1:exon
so has part: feature:8645522-8645636:-1:exon
so has part: feature:8644822-8644897:-1:exon
so has part: feature:8643903-8644010:-1:exon
so has part: feature:8643056-8643189:-1:exon
so has part: feature:8640712-8641720:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8652672-8652897:-1:exon

position:8652672:-1
position: 8652672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8649130-8649283:-1:exon

position:8649130:-1
position: 8649130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8649283:-1
position: 8649283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8648117-8648229:-1:exon

position:8648117:-1
position: 8648117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8648229:-1
position: 8648229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8647092-8647204:-1:exon

position:8647092:-1
position: 8647092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8647204:-1
position: 8647204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8645522-8645636:-1:exon

position:8645522:-1
position: 8645522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8645636:-1
position: 8645636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8644822-8644897:-1:exon

position:8644822:-1
position: 8644822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8644897:-1
position: 8644897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8643903-8644010:-1:exon

position:8643903:-1
position: 8643903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8644010:-1
position: 8644010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8643056-8643189:-1:exon

position:8643056:-1
position: 8643056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8643189:-1
position: 8643189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8640712-8641720:-1:exon

position:8641720:-1
position: 8641720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AGA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: AGA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase
translation: MAWKPGLLPLLLLLLGPAPARSFGQLPLVLNTWPFRNATMAAWKTLAAGGSALDAVESGCATCEQQQCDGSVGFGGSPDESGETTLDAMIMDGTTMNVGAVGDLRRIKNAIGVARKVLEHTTHTLLAGEAATKFAESMGFINEDLSTNVSQALHSDWRARNCQPNYWKNVIPDSSKYCGPYKPPTVLKRDGITYEDTAQSYGHDTIGMVVIHKTGNIAAGTSTNGIKFKIPGRIGDSPIPGSGAYADDMVGAAAATGDGDILMRFVPSYQAVEYMRRGENPTTACEKVISRIQKYFPKFFGAVICANVTGSYGAACNKLSTFTQFPFMVYNPLKSAPTEEKVDCI
SIO_010081: AGA
subclass of: SO_0000673
so part of: AGA
location: complement(join(8641620..8641720,8643056..8643189,8643903..8644010,8644822..8644897,8645522..8645636,8647092..8647204,8648117..8648229,8649130..8649283,8652672..8652795))
location: region:8641620-8652795:-1
so has part: feature:8652672-8652795:-1:exon
so has part: feature:8649130-8649283:-1:exon
so has part: feature:8648117-8648229:-1:exon
so has part: feature:8647092-8647204:-1:exon
so has part: feature:8645522-8645636:-1:exon
so has part: feature:8644822-8644897:-1:exon
so has part: feature:8643903-8644010:-1:exon
so has part: feature:8643056-8643189:-1:exon
so has part: feature:8641620-8641720:-1:exon

XP_027385728.1
type: Protein
SIO_000068: ncbiprotein

position:8641620:-1
position: 8641620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8652795:-1
position: 8652795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8652672-8652795:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8649130-8649283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8648117-8648229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8647092-8647204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8645522-8645636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8644822-8644897:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8643903-8644010:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8643056-8643189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8641620-8641720:-1:exon

LOC113885107
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885107
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(9934819..9934923)
location: region:9934819-9934923:-1
so has part: feature:9934819-9934923:-1:exon
subclass of: SO_0000623

113885107
type: Gene
SIO_000068: ncbigene

position:9934819:-1
position: 9934819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9934923:-1
position: 9934923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9934819-9934923:-1:exon

LOC113885107
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: snRNA
gene: LOC113885107
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509148.1
SIO_010081: LOC113885107
subclass of: SO_0000673
so part of: LOC113885107
location: complement(9934819..9934923)
location: region:9934819-9934923:-1
so has part: feature:9934819-9934923:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9934819-9934923:-1:exon

LOC113885113
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113885113
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 10358174..10358296
location: region:10358174-10358296:1
so has part: feature:10358174-10358296:1:exon
subclass of: SO_0000578

113885113
type: Gene
SIO_000068: ncbigene

position:10358174:1
position: 10358174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10358296:1
position: 10358296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10358174-10358296:1:exon

LOC113885113
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: snoRNA
gene: LOC113885113
product: small nucleolar RNA SNORD22
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00099
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003509152.1
SIO_010081: LOC113885113
subclass of: SO_0000673
so part of: LOC113885113
location: 10358174..10358296
location: region:10358174-10358296:1
so has part: feature:10358174-10358296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10358174-10358296:1:exon

TENM3
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TENM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10992883..13739123
location: region:10992883-13739123:1
so has part: feature:10992883-13739123:1:exon
subclass of: SO_0000010

113885052
type: Gene
SIO_000068: ncbigene

position:10992883:1
position: 10992883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13739123:1
position: 13739123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10992883-13739123:1:exon

TENM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TENM3
product: teneurin transmembrane protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_027530163.1
SIO_010081: TENM3
subclass of: SO_0000673
so part of: TENM3
location: join(10992883..10992957,11093168..11093286,11469752..11469788,11767235..11767289,12083870..12083910,12335965..12336113,12735999..12736161,12856422..12856502,13025800..13025879,13286939..13287245,13311018..13311296,13548994..13549231,13566348..13566446,13570972..13571210,13600021..13600143,13611433..13611647,13616453..13616663,13617708..13617809,13618025..13618219,13619282..13619482,13624400..13624585,13647353..13647379,13648970..13648990,13649910..13650056,13664874..13665090,13666101..13666220,13667042..13667303,13671127..13671394,13672665..13672808,13679795..13680044,13680752..13680772,13689952..13690184,13691247..13691401,13692181..13693055,13708667..13708842,13714262..13714497,13723879..13724175,13727090..13728701,13732236..13732366,13735522..13739123)
location: region:10992883-13739123:1
so has part: feature:10992883-10992957:1:exon
so has part: feature:11093168-11093286:1:exon
so has part: feature:11469752-11469788:1:exon
so has part: feature:11767235-11767289:1:exon
so has part: feature:12083870-12083910:1:exon
so has part: feature:12335965-12336113:1:exon
so has part: feature:12735999-12736161:1:exon
so has part: feature:12856422-12856502:1:exon
so has part: feature:13025800-13025879:1:exon
so has part: feature:13286939-13287245:1:exon
so has part: feature:13311018-13311296:1:exon
so has part: feature:13548994-13549231:1:exon
so has part: feature:13566348-13566446:1:exon
so has part: feature:13570972-13571210:1:exon
so has part: feature:13600021-13600143:1:exon
so has part: feature:13611433-13611647:1:exon
so has part: feature:13616453-13616663:1:exon
so has part: feature:13617708-13617809:1:exon
so has part: feature:13618025-13618219:1:exon
so has part: feature:13619282-13619482:1:exon
so has part: feature:13624400-13624585:1:exon
so has part: feature:13647353-13647379:1:exon
so has part: feature:13648970-13648990:1:exon
so has part: feature:13649910-13650056:1:exon
so has part: feature:13664874-13665090:1:exon
so has part: feature:13666101-13666220:1:exon
so has part: feature:13667042-13667303:1:exon
so has part: feature:13671127-13671394:1:exon
so has part: feature:13672665-13672808:1:exon
so has part: feature:13679795-13680044:1:exon
so has part: feature:13680752-13680772:1:exon
so has part: feature:13689952-13690184:1:exon
so has part: feature:13691247-13691401:1:exon
so has part: feature:13692181-13693055:1:exon
so has part: feature:13708667-13708842:1:exon
so has part: feature:13714262-13714497:1:exon
so has part: feature:13723879-13724175:1:exon
so has part: feature:13727090-13728701:1:exon
so has part: feature:13732236-13732366:1:exon
so has part: feature:13735522-13739123:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10992883-10992957:1:exon

position:10992957:1
position: 10992957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11093168-11093286:1:exon

position:11093168:1
position: 11093168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11093286:1
position: 11093286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11469752-11469788:1:exon

position:11469752:1
position: 11469752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11469788:1
position: 11469788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11767235-11767289:1:exon

position:11767235:1
position: 11767235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11767289:1
position: 11767289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12083870-12083910:1:exon

position:12083870:1
position: 12083870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12083910:1
position: 12083910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12335965-12336113:1:exon

position:12335965:1
position: 12335965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12336113:1
position: 12336113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12735999-12736161:1:exon

position:12735999:1
position: 12735999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12736161:1
position: 12736161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12856422-12856502:1:exon

position:12856422:1
position: 12856422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12856502:1
position: 12856502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13025800-13025879:1:exon

position:13025800:1
position: 13025800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13025879:1
position: 13025879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13286939-13287245:1:exon

position:13286939:1
position: 13286939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13287245:1
position: 13287245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13311018-13311296:1:exon

position:13311018:1
position: 13311018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13311296:1
position: 13311296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13548994-13549231:1:exon

position:13548994:1
position: 13548994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13549231:1
position: 13549231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13566348-13566446:1:exon

position:13566348:1
position: 13566348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13566446:1
position: 13566446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13570972-13571210:1:exon

position:13570972:1
position: 13570972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13571210:1
position: 13571210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:13600021-13600143:1:exon

position:13600021:1
position: 13600021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13600143:1
position: 13600143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:13611433-13611647:1:exon

position:13611433:1
position: 13611433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13611647:1
position: 13611647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:13616453-13616663:1:exon

position:13616453:1
position: 13616453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13616663:1
position: 13616663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:13617708-13617809:1:exon

position:13617708:1
position: 13617708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13617809:1
position: 13617809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:13618025-13618219:1:exon

position:13618025:1
position: 13618025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13618219:1
position: 13618219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:13619282-13619482:1:exon

position:13619282:1
position: 13619282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13619482:1
position: 13619482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:13624400-13624585:1:exon

position:13624400:1
position: 13624400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13624585:1
position: 13624585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:13647353-13647379:1:exon

position:13647353:1
position: 13647353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13647379:1
position: 13647379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:13648970-13648990:1:exon

position:13648970:1
position: 13648970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13648990:1
position: 13648990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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