Bos indicus x Bos taurus breed Angus x Brahman F1 hybrid chromosome 24, Bos_hybrid_MaternalHap_v2.0, whole genome shotgun sequence.
type: Entry
definition: Bos indicus x Bos taurus breed Angus x Brahman F1 hybrid chromosome 24, Bos_hybrid_MaternalHap_v2.0, whole genome shotgun sequence.
sequence version: NC_040099.1
sequence date: 2018-12-25
sequence: sequence
division: CON
label: NC_040099.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA508959
dblink: SAMN08473802
keyword: WGS
keyword: RefSeq
source: Bos indicus x Bos taurus (hybrid cattle)
organism: Bos indicus x Bos taurus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos hybrids.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM011827.1.\nAssembly name: Bos_hybrid_MaternalHap_v2.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of Adelaide on\n2018/11/30. The original whole-genome shotgun project has the\naccession PUFS00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of Adelaide\nAssembly Method :: TrioCanu v. 1.6\nAssembly Name :: Bos_hybrid_MaternalHap_v2.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 136.0x\nSequencing Technology :: PacBio Sequel; PacBio RSII; Illumina\n NextSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Bos indicus x Bos taurus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 62414538
topology: linear
so has quality: SO_0000987
location: 1..62414538
location: region:1-62414538:1
RO_0002162: 30522

NC_040099
type: RefSeq
SIO_000068: refseq

PRJNA508959
type: BioProject
SIO_000068: bioproject

SAMN08473802
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62414538:1
position: 62414538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-62414538:1:source
so part of: sequence
organism: Bos indicus x Bos taurus
mol type: genomic DNA
chromosome: 24
sex: male
tissue type: lung
dev stage: fetus
collected by: Stefan Hiendleder
breed: Angus x Brahman F1 hybrid

30522
type: Taxonomy
SIO_000068: taxonomy

LOC113883044
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113883044
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(214695..214813)
location: region:214695-214813:-1
so has part: feature:214695-214813:-1:exon

113883044
type: Gene
SIO_000068: ncbigene

position:214695:-1
position: 214695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214813:-1
position: 214813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214695-214813:-1:exon

LOC113883044
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113883044
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC113883044
subclass of: SO_0000673
so part of: LOC113883044
location: complement(214695..214813)
location: region:214695-214813:-1
so has part: feature:214695-214813:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:214695-214813:-1:exon

LOC113882582
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882582
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(233261..234203)
location: region:233261-234203:-1
so has part: feature:233261-234203:-1:exon

113882582
type: Gene
SIO_000068: ncbigene

position:233261:-1
position: 233261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234203:-1
position: 234203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233261-234203:-1:exon

LOC113882582
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113882582
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113882582
subclass of: SO_0000673
so part of: LOC113882582
location: complement(233261..234203)
location: region:233261-234203:-1
so has part: feature:233261-234203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:233261-234203:-1:exon

LOC113882583
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(242800..243706)
location: region:242800-243706:-1
so has part: feature:242800-243706:-1:exon

113882583
type: Gene
SIO_000068: ncbigene

position:242800:-1
position: 242800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243706:-1
position: 243706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242800-243706:-1:exon

LOC113882583
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113882583
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC113882583
subclass of: SO_0000673
so part of: LOC113882583
location: complement(242800..243706)
location: region:242800-243706:-1
so has part: feature:242800-243706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242800-243706:-1:exon

LOC113882584
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 287328..288324
location: region:287328-288324:1
so has part: feature:287328-288324:1:exon

113882584
type: Gene
SIO_000068: ncbigene

position:287328:1
position: 287328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288324:1
position: 288324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287328-288324:1:exon

LOC113882584
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113882584
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113882584
subclass of: SO_0000673
so part of: LOC113882584
location: 287328..288324
location: region:287328-288324:1
so has part: feature:287328-288324:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:287328-288324:1:exon

LOC113882585
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 300719..310166
location: region:300719-310166:1
so has part: feature:300719-310166:1:exon
subclass of: SO_0000010

113882585
type: Gene
SIO_000068: ncbigene

position:300719:1
position: 300719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310166:1
position: 310166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300719-310166:1:exon

LOC113882585
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113882585
product: olfactory receptor 1019-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_027525506.1
SIO_010081: LOC113882585
subclass of: SO_0000673
so part of: LOC113882585
location: join(300719..301472,309982..310166)
location: region:300719-310166:1
so has part: feature:300719-301472:1:exon
so has part: feature:309982-310166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300719-301472:1:exon

position:301472:1
position: 301472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309982-310166:1:exon

position:309982:1
position: 309982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113882585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113882585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 1019-like
translation: MTAEKGTVFADFIFLGLSGRQDVQQGLFVLFLLVYGITAVANVGMVLLIKRDPRLHTPMYYFLSNLSFCDICCSSTISPKMLADFLSKQKRIPYGVCAIQMYFFGAFGDVECLMLAVMAYDRYVAICNPLLYTIAMSRGICTQLVVIAYIIGLVDSAIHTCCKFQLSICNSNIVNHFFCDIPPLLALSYSDTTSNEIVMFTFTGCVAGTSIITVLLSYSYIITTILRMNSAEGRRKAFSTCASHLTAVAIFHGKLLFMYFRPSSSYSMDTDKTASVFYTVVLPMLNPLIYSLRNKHVKGAIKKATSTKLCSG
SIO_010081: LOC113882585
subclass of: SO_0000673
so part of: LOC113882585
location: join(300719..301472,309982..310166)
location: region:300719-310166:1
so has part: feature:300719-301472:1:exon
so has part: feature:309982-310166:1:exon

XP_027381307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300719-301472:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309982-310166:1:exon

LOC113883005
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113883005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 324759..325694
location: region:324759-325694:1
so has part: feature:324759-325694:1:exon
subclass of: SO_0000010

113883005
type: Gene
SIO_000068: ncbigene

position:324759:1
position: 324759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325694:1
position: 325694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324759-325694:1:exon

LOC113883005
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113883005
product: olfactory receptor 5I1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027526314.1
SIO_010081: LOC113883005
subclass of: SO_0000673
so part of: LOC113883005
location: 324759..325694
location: region:324759-325694:1
so has part: feature:324759-325694:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324759-325694:1:exon

LOC113883005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113883005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 5I1-like
translation: MEVENSTVKPQFFLLGFSDHPELQSVLFAVFLSIYSVTLMGNLGMILLITASPPLHTPMYFFLCILSFVDACYSSVIAPKLLVDLVSDEKTISYNGCAAQLYFFCCLVDTESFLLTVMAYDRYIAICNPLLYTVIMSKKICCQLAIGAFLGGTMSSVIHTTNTFHLSFCSNEINHFFCDISPLFSLSCTDAYIHDIVLVVFASLVEALCLLTVLLSYILIIAAILKTGSAEGRRKGFSTCASHLIVVSIYHGTLIFIYLRPSAGHSLDIDKVTSVFYTLIIPMLNPLIYSLRNKDVKNAFRKMISRKFLS
SIO_010081: LOC113883005
subclass of: SO_0000673
so part of: LOC113883005
location: 324762..325694
location: region:324762-325694:1
so has part: feature:324762-325694:1:exon

XP_027382115.1
type: Protein
SIO_000068: ncbiprotein

position:324762:1
position: 324762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324762-325694:1:exon

LOC113882745
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(332068..332953)
location: region:332068-332953:-1
so has part: feature:332068-332953:-1:exon
subclass of: SO_0000010

113882745
type: Gene
SIO_000068: ncbigene

position:332068:-1
position: 332068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332953:-1
position: 332953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332068-332953:-1:exon

LOC113882745
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113882745
product: olfactory receptor 1020-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027525838.1
SIO_010081: LOC113882745
subclass of: SO_0000673
so part of: LOC113882745
location: complement(332068..332953)
location: region:332068-332953:-1
so has part: feature:332068-332953:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332068-332953:-1:exon

LOC113882745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113882745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 1020-like
translation: MEVENSTVKPQFFLLGVSDHPELQSVLFAVFLSIYSVTLMGNLGMILLITASPPLHTPMYFFLCILSFVDACYSSVIAPKLLVDLVSDEKTISYNGCAAQLYFFCCSVDTESFLLTVMAYDRYIAICNPLLYTVIMSKRICCQLATGAFLRGTMSSIIHTTNTFHLSFCSNEINHFFCDTSPLFSLSCTDTYIHDVVLVVFASLVGARCLLTVLLSYILIIAAILKTGSAEGRRKGFSTCASHLTVVSIYHGTLIFIYLCPGTGHAMAIDKVTSVFYTYVKSLNLQP
SIO_010081: LOC113882745
subclass of: SO_0000673
so part of: LOC113882745
location: complement(332068..332931)
location: region:332068-332931:-1
so has part: feature:332068-332931:-1:exon

XP_027381639.1
type: Protein
SIO_000068: ncbiprotein

position:332931:-1
position: 332931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332068-332931:-1:exon

LOC113882853
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882853
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(355241..356174)
location: region:355241-356174:-1
so has part: feature:355241-356174:-1:exon

113882853
type: Gene
SIO_000068: ncbigene

position:355241:-1
position: 355241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356174:-1
position: 356174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355241-356174:-1:exon

LOC113882853
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113882853
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC113882853
subclass of: SO_0000673
so part of: LOC113882853
location: complement(355241..356174)
location: region:355241-356174:-1
so has part: feature:355241-356174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355241-356174:-1:exon

LOC113882586
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 380170..416305
location: region:380170-416305:1
so has part: feature:380170-416305:1:exon

113882586
type: Gene
SIO_000068: ncbigene

position:380170:1
position: 380170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416305:1
position: 416305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380170-416305:1:exon

LOC113882586
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113882586
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
pseudo: true
SIO_010081: LOC113882586
subclass of: SO_0000673
so part of: LOC113882586
location: 380170..380217
location: region:380170-380217:1
so has part: feature:380170-380217:1:exon

position:380217:1
position: 380217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380170-380217:1:exon

LOC113882586
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113882586
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
pseudo: true
SIO_010081: LOC113882586
subclass of: SO_0000673
so part of: LOC113882586
location: 383996..384235
location: region:383996-384235:1
so has part: feature:383996-384235:1:exon

position:383996:1
position: 383996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384235:1
position: 384235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383996-384235:1:exon

LOC113882586
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113882586
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
pseudo: true
SIO_010081: LOC113882586
subclass of: SO_0000673
so part of: LOC113882586
location: 415337..416305
location: region:415337-416305:1
so has part: feature:415337-416305:1:exon

position:415337:1
position: 415337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415337-416305:1:exon

LOC113883011
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113883011
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 425046..425981
location: region:425046-425981:1
so has part: feature:425046-425981:1:exon

113883011
type: Gene
SIO_000068: ncbigene

position:425046:1
position: 425046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425981:1
position: 425981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425046-425981:1:exon

LOC113883011
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113883011
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins
pseudo: true
SIO_010081: LOC113883011
subclass of: SO_0000673
so part of: LOC113883011
location: 425046..425981
location: region:425046-425981:1
so has part: feature:425046-425981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425046-425981:1:exon

LOC113882587
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 433643..434445
location: region:433643-434445:1
so has part: feature:433643-434445:1:exon

113882587
type: Gene
SIO_000068: ncbigene

position:433643:1
position: 433643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434445:1
position: 434445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433643-434445:1:exon

LOC113882587
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113882587
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC113882587
subclass of: SO_0000673
so part of: LOC113882587
location: 433643..434445
location: region:433643-434445:1
so has part: feature:433643-434445:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433643-434445:1:exon

LOC113882759
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882759
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 456135..457056
location: region:456135-457056:1
so has part: feature:456135-457056:1:exon

113882759
type: Gene
SIO_000068: ncbigene

position:456135:1
position: 456135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457056:1
position: 457056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456135-457056:1:exon

LOC113882759
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113882759
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC113882759
subclass of: SO_0000673
so part of: LOC113882759
location: 456135..457056
location: region:456135-457056:1
so has part: feature:456135-457056:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:456135-457056:1:exon

LOC113882576
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(462977..463912)
location: region:462977-463912:-1
so has part: feature:462977-463912:-1:exon
subclass of: SO_0000010

113882576
type: Gene
SIO_000068: ncbigene

position:462977:-1
position: 462977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463912:-1
position: 463912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462977-463912:-1:exon

LOC113882576
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113882576
product: olfactory receptor 1020-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027525504.1
SIO_010081: LOC113882576
subclass of: SO_0000673
so part of: LOC113882576
location: complement(462977..463912)
location: region:462977-463912:-1
so has part: feature:462977-463912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:462977-463912:-1:exon

LOC113882576
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113882576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 1020-like
translation: MEVENSTGKTQFFLLGFSDHPELQSVLFAVFLSIYSVTLMGNLGMILLITASPPLHTPMYFFLCILSFVDACYSSVIAPKLLVDLVSDEKTISYNGCAAQLYFFCFLVDTESFLLTVMAYDRYIAICNPLLYTVIMSKKICCQLAIGAFLGGTMSSVIHTTNTFHLSFCSNEINHFFCDISPLFSLSCTDAYIHDIVLVVFASLVEALCLLTVLPSYILIIAAILKTGSAKGRRKGFSTCASHLIVVSIYHGTLIFIYLRPGAGHSLDIDKVTSVFYTLIIPMLNPLIYSLRNKDVKNAFRKMISRKFLS
SIO_010081: LOC113882576
subclass of: SO_0000673
so part of: LOC113882576
location: complement(462977..463909)
location: region:462977-463909:-1
so has part: feature:462977-463909:-1:exon

XP_027381305.1
type: Protein
SIO_000068: ncbiprotein

position:463909:-1
position: 463909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462977-463909:-1:exon

LOC113882625
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(473526..474507)
location: region:473526-474507:-1
so has part: feature:473526-474507:-1:exon
subclass of: SO_0000010

113882625
type: Gene
SIO_000068: ncbigene

position:473526:-1
position: 473526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474507:-1
position: 474507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473526-474507:-1:exon

LOC113882625
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113882625
product: olfactory receptor 5W2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027525570.1
SIO_010081: LOC113882625
subclass of: SO_0000673
so part of: LOC113882625
location: complement(473526..474507)
location: region:473526-474507:-1
so has part: feature:473526-474507:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:473526-474507:-1:exon

LOC113882625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113882625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 5W2-like
translation: MTAENCTVFADFIFLGLSGRQDVQQGLFVLFLLVYGITAVANVGMVLLIKRDPRLHTPMYYFLSHLSFCDICYSSTISPKMLADFLSEQKRIPYDVCAIQMYFFGAFGDVECLMLAVMAYDRYVAICNPLLYTIAMSRGICTQLVVVAYIVGLVDSAIHTCCAFQLSFCNSNIVNHFFCDIPPLLALSSSDASINEIMLFISSSCVLGTSIITVLLSYSYIITTILRMSSAKGRRKAFSTCASHLTAVAIFHGTLLFMYFRPSSSYSMDTDKTASVFYTVVIPMLNPLIYSLRNKDVKGALKKATSTKLCSG
SIO_010081: LOC113882625
subclass of: SO_0000673
so part of: LOC113882625
location: complement(473569..474507)
location: region:473569-474507:-1
so has part: feature:473569-474507:-1:exon

XP_027381371.1
type: Protein
SIO_000068: ncbiprotein

position:473569:-1
position: 473569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473569-474507:-1:exon

LOC113882589
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(490096..491090)
location: region:490096-491090:-1
so has part: feature:490096-491090:-1:exon

113882589
type: Gene
SIO_000068: ncbigene

position:490096:-1
position: 490096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491090:-1
position: 491090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490096-491090:-1:exon

LOC113882589
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113882589
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC113882589
subclass of: SO_0000673
so part of: LOC113882589
location: complement(490096..491090)
location: region:490096-491090:-1
so has part: feature:490096-491090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:490096-491090:-1:exon

LOC113882797
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(494191..495024)
location: region:494191-495024:-1
so has part: feature:494191-495024:-1:exon
subclass of: SO_0000010

113882797
type: Gene
SIO_000068: ncbigene

position:494191:-1
position: 494191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495024:-1
position: 495024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494191-495024:-1:exon

LOC113882797
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113882797
product: olfactory receptor-like protein OLF2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027525942.1
SIO_010081: LOC113882797
subclass of: SO_0000673
so part of: LOC113882797
location: complement(494191..495024)
location: region:494191-495024:-1
so has part: feature:494191-495024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:494191-495024:-1:exon

LOC113882797
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113882797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor-like protein OLF2
translation: MDGENCTSLKEFLLLGISSSPVIKVTLFMTFLVVYLIILVANLGMIVLVRTDPQLHTSMYFFLSHLFFSDLCYSTAIGPRMLAGFLIKNKSIPFYGCALQFLIFCTFADSECLLLAVMAYDRYVAINNPLLYTVKMSGKVCSLLMAGVYVVRVMDALINTVLTFHLCFCGSNEINHFFCDVPPLLLLTCSDTQVSELVIFIIFGFIELITLSGLFVSYCYIILAVIKIHSAEGRFKAFSTCTSHLTASAIFQGTLLFMYFRSSTSYSLDEDKMTSLF
SIO_010081: LOC113882797
subclass of: SO_0000673
so part of: LOC113882797
location: complement(494191..495024)
location: region:494191-495024:-1
so has part: feature:494191-495024:-1:exon

XP_027381743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494191-495024:-1:exon

PARD6G
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: PARD6G
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 544501..622449
location: region:544501-622449:1
so has part: feature:544501-622449:1:exon
subclass of: SO_0000010

113882782
type: Gene
SIO_000068: ncbigene

position:544501:1
position: 544501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622449:1
position: 622449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544501-622449:1:exon

PARD6G
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: PARD6G
product: par-6 family cell polarity regulator gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 109 samples with support for all annotated introns
transcript id: XM_027525910.1
SIO_010081: PARD6G
subclass of: SO_0000673
so part of: PARD6G
location: join(544501..544917,585164..585386,619628..622449)
location: region:544501-622449:1
so has part: feature:544501-544917:1:exon
so has part: feature:585164-585386:1:exon
so has part: feature:619628-622449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544501-544917:1:exon

position:544917:1
position: 544917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:585164-585386:1:exon

position:585164:1
position: 585164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585386:1
position: 585386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:619628-622449:1:exon

position:619628:1
position: 619628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PARD6G
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: PARD6G
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: partitioning defective 6 homolog gamma
translation: MNRSFHKSQTLGFYDCSAVEVKSKFGAEFRRFSLDRQKPGRFEDFYKLVVHTHHIANTEVTIGYADVHGDLLPINNDDNFCKAVSSANPLLRVFIQKREEAEHCSFGAGSLSRRRRPLALREDGPRRRTHLHIGLPHDFRPVSSIIDVDIVPETHRRVRLYRHGCQKPLGFYIRDGTSVRVAPQGLEKVPGVFISRMVPGGLAESTGLLAVDDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQRNNVVRGSRASGSSGRSSDSTASRHSLPAAHVLQNLPPDEMESDEEADVVLEGVLEPRLAPRPPPGSLTRVNGAGLAPSLHSPGREGSVQRLLSSLRSDPRHSLALPPGGVEEHGPAVTL
SIO_010081: PARD6G
subclass of: SO_0000673
so part of: PARD6G
location: join(544846..544917,585164..585386,619628..620448)
location: region:544846-620448:1
so has part: feature:544846-544917:1:exon
so has part: feature:585164-585386:1:exon
so has part: feature:619628-620448:1:exon

XP_027381711.1
type: Protein
SIO_000068: ncbiprotein

position:544846:1
position: 544846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620448:1
position: 620448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544846-544917:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585164-585386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619628-620448:1:exon

ADNP2
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: ADNP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(641929..674546)
location: region:641929-674546:-1
so has part: feature:641929-674546:-1:exon
subclass of: SO_0000010

113882671
type: Gene
SIO_000068: ncbigene

position:641929:-1
position: 641929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674546:-1
position: 674546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641929-674546:-1:exon

ADNP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ADNP2
product: ADNP homeobox 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 38 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 152 samples with support for all annotated introns
transcript id: XM_027525656.1
SIO_010081: ADNP2
subclass of: SO_0000673
so part of: ADNP2
location: complement(join(641929..646613,651214..651303,663664..663784,674443..674546))
location: region:641929-674546:-1
so has part: feature:674443-674546:-1:exon
so has part: feature:663664-663784:-1:exon
so has part: feature:651214-651303:-1:exon
so has part: feature:641929-646613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:674443-674546:-1:exon

position:674443:-1
position: 674443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:663664-663784:-1:exon

position:663664:-1
position: 663664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663784:-1
position: 663784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:651214-651303:-1:exon

position:651214:-1
position: 651214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651303:-1
position: 651303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:641929-646613:-1:exon

position:646613:-1
position: 646613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADNP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ADNP2
product: ADNP homeobox 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_027525655.1
SIO_010081: ADNP2
subclass of: SO_0000673
so part of: ADNP2
location: complement(join(641929..646613,651214..651303,663664..663784,673552..674052))
location: region:641929-674052:-1
so has part: feature:673552-674052:-1:exon
so has part: feature:663664-663784:-1:exon
so has part: feature:651214-651303:-1:exon
so has part: feature:641929-646613:-1:exon

position:674052:-1
position: 674052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673552-674052:-1:exon

position:673552:-1
position: 673552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:663664-663784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651214-651303:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641929-646613:-1:exon

ADNP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ADNP2
product: ADNP homeobox 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_027525654.1
SIO_010081: ADNP2
subclass of: SO_0000673
so part of: ADNP2
location: complement(join(641929..646613,651214..651303,663664..663784,670142..670834))
location: region:641929-670834:-1
so has part: feature:670142-670834:-1:exon
so has part: feature:663664-663784:-1:exon
so has part: feature:651214-651303:-1:exon
so has part: feature:641929-646613:-1:exon

position:670834:-1
position: 670834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670142-670834:-1:exon

position:670142:-1
position: 670142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:663664-663784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651214-651303:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641929-646613:-1:exon

ADNP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ADNP2
product: ADNP homeobox 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_027525657.1
SIO_010081: ADNP2
subclass of: SO_0000673
so part of: ADNP2
location: complement(join(641929..646613,651214..651303,663664..663784,669971..670104))
location: region:641929-670104:-1
so has part: feature:669971-670104:-1:exon
so has part: feature:663664-663784:-1:exon
so has part: feature:651214-651303:-1:exon
so has part: feature:641929-646613:-1:exon

position:670104:-1
position: 670104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669971-670104:-1:exon

position:669971:-1
position: 669971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:663664-663784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651214-651303:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641929-646613:-1:exon

ADNP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ADNP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activity-dependent neuroprotector homeobox protein 2 isoform X2
translation: MKISKMFQIPVENLDNIRKVRKKVKSILVDIGLDSCKELLKDLKGFDPGEKYFYNTSWGDISLWEPSGKKVRYRTKPYCCSLCKYSTKVLTSFKNHLHRYHEDEIDQELVIPCPNCVFSSQPRVVGRHFRMFHAPARKVQNYTVNILGETKSSRSDVISFTCLKCNFSNTLYYSMKKHVLVAHFHYLINSYFGLRTEEMGEHPGADDTLCAEKLPLSDRYYCKKCNANASSQDALMYHILTSDIHRDLENKLRSVISEHIKKTGLLKQMHIAPKPAAHVAIPPNSSAPGIPASSPCFHLALPQNGQSQTVVQPVQGAAPPATVGAGAVGSVTHSPPAVAQPHMTLVSSPLPVGQSSLTLPPSTPQPVFLSHGVPLNQAANPPVLPLSQPVGPVNKSVGTSILPINQTIRPGVLPLNQPVGPISRPVGPGVLSVNRPVGSGVLPVNPSVTPGVLQAVSPGVISVSRTVPSGVLPAGQVTPAGVIPSGQTATSGVLPAGQVVQSGVLPIGQTAPSGALPTGLTVPLRVLPPGQVVPPGLLPPNQTVSSAVLPVNQGINSGVLQLSQPVMSGVLPVGQPVRPGVLQLNQSVNTNILPANQTIRPGASPNTTFLTSGSILRQLIPTGKQVNGIPTYTLAPVSVTLPVPPGSVATVAPPQMPIQLLQSGPAAQMASSMAGMPSPPVVVNATQNMFVQASSSVAEANQVLKQAKQWKTCPVCNELFPSNVYQVHMEVAHKHSESKAADKLEPEKLAACAPFLKWMREKTVRCLSCKCLVSEEELIHHLLMHGLGCLFCPCTFHDIRGLSEHSRTMHLGKKKLPMDYSNKGFQLDIDANGNLLFPHLDFITILPREELGEREVYLAILAGIHSKSLVPVYIKVRPQAEGASGRPGKQVLTCPFCFGTFVTTEAYELHLKERHHITPTVHTILKSPAFKCIHCCGVYTGNMTLAAIAIHLLRCRSAPKDSSPDLQGQPGLLENSELLLVNGEVIHDPSFSVKRKLPDGHSGAEDQRDGTERPLIIDADTDPAPEKAASAAPVKRQRSEGRTEGPPVSDDALQILALNPKKYEDRSYEDKKQFLRDYFHKRPYPSKKEIELLSSLLWVWKIDVASFFGKRRYICMKAIKNHKPSVLLGFDMCELKNVKHRLNFEHEPQNL
SIO_010081: ADNP2
subclass of: SO_0000673
so part of: ADNP2
location: complement(join(643371..646613,651214..651303,663664..663784,673552..673553))
location: region:643371-673553:-1
so has part: feature:673552-673553:-1:exon
so has part: feature:663664-663784:-1:exon
so has part: feature:651214-651303:-1:exon
so has part: feature:643371-646613:-1:exon

XP_027381456.1
type: Protein
SIO_000068: ncbiprotein

position:643371:-1
position: 643371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673553:-1
position: 673553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673552-673553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663664-663784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651214-651303:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:643371-646613:-1:exon

ADNP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ADNP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activity-dependent neuroprotector homeobox protein 2 isoform X1
translation: MKISKMFQIPVENLDNIRKVRKKVKSILVDIGLDSCKELLKDLKGFDPGEKYFYNTSWGDISLWEPSGKKVRYRTKPYCCSLCKYSTKVLTSFKNHLHRYHEDEIDQELVIPCPNCVFSSQPRVVGRHFRMFHAPARKVQNYTVNILGETKSSRSDVISFTCLKCNFSNTLYYSMKKHVLVAHFHYLINSYFGLRTEEMGEHPGADDTLCAEKLPLSDRYYCKKCNANASSQDALMYHILTSDIHRDLENKLRSVISEHIKKTGLLKQMHIAPKPAAHVAIPPNSSAPGIPASSPCFHLALPQNGQSQTVVQPVQGAAPPATVGAGAVGSVTHSPPAVAQPHMTLVSSPLPVGQSSLTLPPSTPQPVFLSHGVPLNQAANPPVLPLSQPVGPVNKSVGTSILPINQTIRPGVLPLNQPVGPISRPVGPGVLSVNRPVGSGVLPVNPSVTPGVLQAVSPGVISVSRTVPSGVLPAGQVTPAGVIPSGQTATSGVLPAGQVVQSGVLPIGQTAPSGALPTGLTVPLRVLPPGQVVPPGLLPPNQTVSSAVLPVNQGINSGVLQLSQPVMSGVLPVGQPVRPGVLQLNQSVNTNILPANQTIRPGASPNTTFLTSGSILRQLIPTGKQVNGIPTYTLAPVSVTLPVPPGSVATVAPPQMPIQLLQSGPAAQMASSMAGMPSPPVVVNATQNMFVQASSSVAEANQVLKQAKQWKTCPVCNELFPSNVYQVHMEVAHKHSESKAADKLEPEKLAACAPFLKWMREKTVRCLSCKCLVSEEELIHHLLMHGLGCLFCPCTFHDIRGLSEHSRTMHLGKKKLPMDYSNKGFQLDIDANGNLLFPHLDFITILPREELGEREVYLAILAGIHSKSLVPVYIKVRPQAEGASGRPGKQVLTCPFCFGTFVTTEAYELHLKERHHITPTVHTILKSPAFKCIHCCGVYTGNMTLAAIAIHLLRCRSAPKDSSPDLQGQPGLLENSELLLVNGEVIHDPSFSVKRKLPDGHSGAEDQRDGTERPLIIDADTDPAPEKAASAAPVKRQRSEGRTEGPPVSDDALQILALNPKKYEDRSYEDKKQFLRDYFHKRPYPSKKEIELLSSLLWVWKIDVASFFGKRRYICMKAIKNHKPSVLLGFDMCELKNVKHRLNFEHEPQNL
SIO_010081: ADNP2
subclass of: SO_0000673
so part of: ADNP2
location: complement(join(643371..646613,651214..651303,663664..663784,670142..670143))
location: region:643371-670143:-1
so has part: feature:670142-670143:-1:exon
so has part: feature:663664-663784:-1:exon
so has part: feature:651214-651303:-1:exon
so has part: feature:643371-646613:-1:exon

XP_027381455.1
type: Protein
SIO_000068: ncbiprotein

position:670143:-1
position: 670143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670142-670143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663664-663784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651214-651303:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:643371-646613:-1:exon

ADNP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ADNP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activity-dependent neuroprotector homeobox protein 2 isoform X3
translation: MFQIPVENLDNIRKVRKKVKSILVDIGLDSCKELLKDLKGFDPGEKYFYNTSWGDISLWEPSGKKVRYRTKPYCCSLCKYSTKVLTSFKNHLHRYHEDEIDQELVIPCPNCVFSSQPRVVGRHFRMFHAPARKVQNYTVNILGETKSSRSDVISFTCLKCNFSNTLYYSMKKHVLVAHFHYLINSYFGLRTEEMGEHPGADDTLCAEKLPLSDRYYCKKCNANASSQDALMYHILTSDIHRDLENKLRSVISEHIKKTGLLKQMHIAPKPAAHVAIPPNSSAPGIPASSPCFHLALPQNGQSQTVVQPVQGAAPPATVGAGAVGSVTHSPPAVAQPHMTLVSSPLPVGQSSLTLPPSTPQPVFLSHGVPLNQAANPPVLPLSQPVGPVNKSVGTSILPINQTIRPGVLPLNQPVGPISRPVGPGVLSVNRPVGSGVLPVNPSVTPGVLQAVSPGVISVSRTVPSGVLPAGQVTPAGVIPSGQTATSGVLPAGQVVQSGVLPIGQTAPSGALPTGLTVPLRVLPPGQVVPPGLLPPNQTVSSAVLPVNQGINSGVLQLSQPVMSGVLPVGQPVRPGVLQLNQSVNTNILPANQTIRPGASPNTTFLTSGSILRQLIPTGKQVNGIPTYTLAPVSVTLPVPPGSVATVAPPQMPIQLLQSGPAAQMASSMAGMPSPPVVVNATQNMFVQASSSVAEANQVLKQAKQWKTCPVCNELFPSNVYQVHMEVAHKHSESKAADKLEPEKLAACAPFLKWMREKTVRCLSCKCLVSEEELIHHLLMHGLGCLFCPCTFHDIRGLSEHSRTMHLGKKKLPMDYSNKGFQLDIDANGNLLFPHLDFITILPREELGEREVYLAILAGIHSKSLVPVYIKVRPQAEGASGRPGKQVLTCPFCFGTFVTTEAYELHLKERHHITPTVHTILKSPAFKCIHCCGVYTGNMTLAAIAIHLLRCRSAPKDSSPDLQGQPGLLENSELLLVNGEVIHDPSFSVKRKLPDGHSGAEDQRDGTERPLIIDADTDPAPEKAASAAPVKRQRSEGRTEGPPVSDDALQILALNPKKYEDRSYEDKKQFLRDYFHKRPYPSKKEIELLSSLLWVWKIDVASFFGKRRYICMKAIKNHKPSVLLGFDMCELKNVKHRLNFEHEPQNL
SIO_010081: ADNP2
subclass of: SO_0000673
so part of: ADNP2
location: complement(join(643371..646613,651214..651303,663664..663771))
location: region:643371-663771:-1
so has part: feature:663664-663771:-1:exon
so has part: feature:651214-651303:-1:exon
so has part: feature:643371-646613:-1:exon

XP_027381457.1
type: Protein
SIO_000068: ncbiprotein

position:663771:-1
position: 663771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663664-663771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651214-651303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643371-646613:-1:exon

ADNP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ADNP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activity-dependent neuroprotector homeobox protein 2 isoform X3
translation: MFQIPVENLDNIRKVRKKVKSILVDIGLDSCKELLKDLKGFDPGEKYFYNTSWGDISLWEPSGKKVRYRTKPYCCSLCKYSTKVLTSFKNHLHRYHEDEIDQELVIPCPNCVFSSQPRVVGRHFRMFHAPARKVQNYTVNILGETKSSRSDVISFTCLKCNFSNTLYYSMKKHVLVAHFHYLINSYFGLRTEEMGEHPGADDTLCAEKLPLSDRYYCKKCNANASSQDALMYHILTSDIHRDLENKLRSVISEHIKKTGLLKQMHIAPKPAAHVAIPPNSSAPGIPASSPCFHLALPQNGQSQTVVQPVQGAAPPATVGAGAVGSVTHSPPAVAQPHMTLVSSPLPVGQSSLTLPPSTPQPVFLSHGVPLNQAANPPVLPLSQPVGPVNKSVGTSILPINQTIRPGVLPLNQPVGPISRPVGPGVLSVNRPVGSGVLPVNPSVTPGVLQAVSPGVISVSRTVPSGVLPAGQVTPAGVIPSGQTATSGVLPAGQVVQSGVLPIGQTAPSGALPTGLTVPLRVLPPGQVVPPGLLPPNQTVSSAVLPVNQGINSGVLQLSQPVMSGVLPVGQPVRPGVLQLNQSVNTNILPANQTIRPGASPNTTFLTSGSILRQLIPTGKQVNGIPTYTLAPVSVTLPVPPGSVATVAPPQMPIQLLQSGPAAQMASSMAGMPSPPVVVNATQNMFVQASSSVAEANQVLKQAKQWKTCPVCNELFPSNVYQVHMEVAHKHSESKAADKLEPEKLAACAPFLKWMREKTVRCLSCKCLVSEEELIHHLLMHGLGCLFCPCTFHDIRGLSEHSRTMHLGKKKLPMDYSNKGFQLDIDANGNLLFPHLDFITILPREELGEREVYLAILAGIHSKSLVPVYIKVRPQAEGASGRPGKQVLTCPFCFGTFVTTEAYELHLKERHHITPTVHTILKSPAFKCIHCCGVYTGNMTLAAIAIHLLRCRSAPKDSSPDLQGQPGLLENSELLLVNGEVIHDPSFSVKRKLPDGHSGAEDQRDGTERPLIIDADTDPAPEKAASAAPVKRQRSEGRTEGPPVSDDALQILALNPKKYEDRSYEDKKQFLRDYFHKRPYPSKKEIELLSSLLWVWKIDVASFFGKRRYICMKAIKNHKPSVLLGFDMCELKNVKHRLNFEHEPQNL
SIO_010081: ADNP2
subclass of: SO_0000673
so part of: ADNP2
location: complement(join(643371..646613,651214..651303,663664..663771))
location: region:643371-663771:-1
so has part: feature:663664-663771:-1:exon
so has part: feature:651214-651303:-1:exon
so has part: feature:643371-646613:-1:exon

XP_027381458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663664-663771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651214-651303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643371-646613:-1:exon

RBFA
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: RBFA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(690240..704766)
location: region:690240-704766:-1
so has part: feature:690240-704766:-1:exon
subclass of: SO_0000010

113882643
type: Gene
SIO_000068: ncbigene

position:690240:-1
position: 690240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704766:-1
position: 704766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:690240-704766:-1:exon

RBFA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: RBFA
product: ribosome binding factor A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_027525598.1
SIO_010081: RBFA
subclass of: SO_0000673
so part of: RBFA
location: complement(join(690240..692953,694074..694147,696463..696547,699263..699375,699960..700028,702179..702221,704518..704739))
location: region:690240-704739:-1
so has part: feature:704518-704739:-1:exon
so has part: feature:702179-702221:-1:exon
so has part: feature:699960-700028:-1:exon
so has part: feature:699263-699375:-1:exon
so has part: feature:696463-696547:-1:exon
so has part: feature:694074-694147:-1:exon
so has part: feature:690240-692953:-1:exon

position:704739:-1
position: 704739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704518-704739:-1:exon

position:704518:-1
position: 704518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:702179-702221:-1:exon

position:702179:-1
position: 702179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702221:-1
position: 702221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:699960-700028:-1:exon

position:699960:-1
position: 699960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700028:-1
position: 700028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:699263-699375:-1:exon

position:699263:-1
position: 699263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699375:-1
position: 699375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:696463-696547:-1:exon

position:696463:-1
position: 696463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696547:-1
position: 696547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:694074-694147:-1:exon

position:694074:-1
position: 694074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694147:-1
position: 694147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:690240-692953:-1:exon

position:692953:-1
position: 692953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBFA
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: RBFA
product: ribosome binding factor A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XR_003508410.1
SIO_010081: RBFA
so part of: RBFA
location: complement(join(690240..692048,692244..692953,694074..694147,696463..696547,699263..699375,699852..700028,702179..702221,704518..704739))
location: region:690240-704739:-1
so has part: feature:704518-704739:-1:exon
so has part: feature:702179-702221:-1:exon
so has part: feature:699852-700028:-1:exon
so has part: feature:699263-699375:-1:exon
so has part: feature:696463-696547:-1:exon
so has part: feature:694074-694147:-1:exon
so has part: feature:692244-692953:-1:exon
so has part: feature:690240-692048:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:704518-704739:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702179-702221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:699852-700028:-1:exon

position:699852:-1
position: 699852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:699263-699375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696463-696547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:694074-694147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:692244-692953:-1:exon

position:692244:-1
position: 692244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:690240-692048:-1:exon

position:692048:-1
position: 692048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBFA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: RBFA
product: ribosome binding factor A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 44 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 201 samples with support for all annotated introns
transcript id: XM_027525597.1
SIO_010081: RBFA
subclass of: SO_0000673
so part of: RBFA
location: complement(join(690469..692953,694074..694147,696463..696547,699263..699375,699852..700028,702179..702221,704518..704766))
location: region:690469-704766:-1
so has part: feature:704518-704766:-1:exon
so has part: feature:702179-702221:-1:exon
so has part: feature:699852-700028:-1:exon
so has part: feature:699263-699375:-1:exon
so has part: feature:696463-696547:-1:exon
so has part: feature:694074-694147:-1:exon
so has part: feature:690469-692953:-1:exon

position:690469:-1
position: 690469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704518-704766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702179-702221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:699852-700028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:699263-699375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696463-696547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:694074-694147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:690469-692953:-1:exon

RBFA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: RBFA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ribosome-binding factor A, mitochondrial isoform X2
translation: MWAALRGRPRLHLGLLSGARGLHSSPVSCGKNLLKKFASKTKKKFWYEGPSLGSHLTHKSSQLEFLTKSTSRRTRKEDQVSLTSDFSACRVFWRATLSEAQNAHTEAVLRRSAAHMRHLLMSQQTLRNVPPIVFVQDKKYAAVMEVDRLLAIADFGPRGEKEDFVQSDFSDPEALDAAPPSDTLSPAAHLNLCGIDHEALNKQILEYKRRREQGHGSASPLWPEHVADLRKQMRRRKAKPHVDDDLSPKNYLQGGE
SIO_010081: RBFA
subclass of: SO_0000673
so part of: RBFA
location: complement(join(692692..692953,694074..694147,696463..696547,699263..699375,699960..700028,702179..702221,704518..704642))
location: region:692692-704642:-1
so has part: feature:704518-704642:-1:exon
so has part: feature:702179-702221:-1:exon
so has part: feature:699960-700028:-1:exon
so has part: feature:699263-699375:-1:exon
so has part: feature:696463-696547:-1:exon
so has part: feature:694074-694147:-1:exon
so has part: feature:692692-692953:-1:exon

XP_027381399.1
type: Protein
SIO_000068: ncbiprotein

position:692692:-1
position: 692692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704642:-1
position: 704642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704518-704642:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702179-702221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:699960-700028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:699263-699375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696463-696547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:694074-694147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:692692-692953:-1:exon

RBFA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: RBFA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ribosome-binding factor A, mitochondrial isoform X1
translation: MWAALRGRPRLHLGLLSGARGLHSSPVSCGKNLLKKFASKTKKKFWYEGPSLGSHLTHKSSQLEFLTKSTSRRTRKEDQVRLRALNGLLYKALTDLLCTPEVSQELCDLNVELCKVSLTSDFSACRVFWRATLSEAQNAHTEAVLRRSAAHMRHLLMSQQTLRNVPPIVFVQDKKYAAVMEVDRLLAIADFGPRGEKEDFVQSDFSDPEALDAAPPSDTLSPAAHLNLCGIDHEALNKQILEYKRRREQGHGSASPLWPEHVADLRKQMRRRKAKPHVDDDLSPKNYLQGGE
SIO_010081: RBFA
subclass of: SO_0000673
so part of: RBFA
location: complement(join(692692..692953,694074..694147,696463..696547,699263..699375,699852..700028,702179..702221,704518..704642))
location: region:692692-704642:-1
so has part: feature:704518-704642:-1:exon
so has part: feature:702179-702221:-1:exon
so has part: feature:699852-700028:-1:exon
so has part: feature:699263-699375:-1:exon
so has part: feature:696463-696547:-1:exon
so has part: feature:694074-694147:-1:exon
so has part: feature:692692-692953:-1:exon

XP_027381398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:704518-704642:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702179-702221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:699852-700028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:699263-699375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696463-696547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:694074-694147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:692692-692953:-1:exon

LOC113882642
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(707282..738894)
location: region:707282-738894:-1
so has part: feature:707282-738894:-1:exon
subclass of: SO_0000010

113882642
type: Gene
SIO_000068: ncbigene

position:707282:-1
position: 707282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738894:-1
position: 738894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707282-738894:-1:exon

LOC113882642
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113882642
product: probable 2-ketogluconate reductase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_027525596.1
SIO_010081: LOC113882642
subclass of: SO_0000673
so part of: LOC113882642
location: complement(join(707282..707511,712203..712299,713656..713834,715269..715440,716340..716724,738613..738894))
location: region:707282-738894:-1
so has part: feature:738613-738894:-1:exon
so has part: feature:716340-716724:-1:exon
so has part: feature:715269-715440:-1:exon
so has part: feature:713656-713834:-1:exon
so has part: feature:712203-712299:-1:exon
so has part: feature:707282-707511:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:738613-738894:-1:exon

position:738613:-1
position: 738613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:716340-716724:-1:exon

position:716340:-1
position: 716340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716724:-1
position: 716724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:715269-715440:-1:exon

position:715269:-1
position: 715269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715440:-1
position: 715440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:713656-713834:-1:exon

position:713656:-1
position: 713656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713834:-1
position: 713834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:712203-712299:-1:exon

position:712203:-1
position: 712203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712299:-1
position: 712299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:707282-707511:-1:exon

position:707511:-1
position: 707511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113882642
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113882642
product: probable 2-ketogluconate reductase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_027525595.1
SIO_010081: LOC113882642
subclass of: SO_0000673
so part of: LOC113882642
location: complement(join(707282..707511,712203..712299,713656..713834,715269..715440,716340..716724,721078..721167))
location: region:707282-721167:-1
so has part: feature:721078-721167:-1:exon
so has part: feature:716340-716724:-1:exon
so has part: feature:715269-715440:-1:exon
so has part: feature:713656-713834:-1:exon
so has part: feature:712203-712299:-1:exon
so has part: feature:707282-707511:-1:exon

position:721167:-1
position: 721167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721078-721167:-1:exon

position:721078:-1
position: 721078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:716340-716724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715269-715440:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713656-713834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:712203-712299:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707282-707511:-1:exon

LOC113882642
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113882642
product: probable 2-ketogluconate reductase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027525593.1
SIO_010081: LOC113882642
subclass of: SO_0000673
so part of: LOC113882642
location: complement(join(707282..707511,712203..712299,713656..713834,715269..715440,716340..716724,720832..720878,720985..721149))
location: region:707282-721149:-1
so has part: feature:720985-721149:-1:exon
so has part: feature:720832-720878:-1:exon
so has part: feature:716340-716724:-1:exon
so has part: feature:715269-715440:-1:exon
so has part: feature:713656-713834:-1:exon
so has part: feature:712203-712299:-1:exon
so has part: feature:707282-707511:-1:exon

position:721149:-1
position: 721149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:720985-721149:-1:exon

position:720985:-1
position: 720985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720832-720878:-1:exon

position:720832:-1
position: 720832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720878:-1
position: 720878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:716340-716724:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:715269-715440:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713656-713834:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712203-712299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707282-707511:-1:exon

LOC113882642
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113882642
product: probable 2-ketogluconate reductase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_027525594.1
SIO_010081: LOC113882642
subclass of: SO_0000673
so part of: LOC113882642
location: complement(join(707282..707511,712203..712299,713656..713834,715269..715440,716340..716724,720832..720878,721078..721139))
location: region:707282-721139:-1
so has part: feature:721078-721139:-1:exon
so has part: feature:720832-720878:-1:exon
so has part: feature:716340-716724:-1:exon
so has part: feature:715269-715440:-1:exon
so has part: feature:713656-713834:-1:exon
so has part: feature:712203-712299:-1:exon
so has part: feature:707282-707511:-1:exon

position:721139:-1
position: 721139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721078-721139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720832-720878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:716340-716724:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:715269-715440:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713656-713834:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712203-712299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:707282-707511:-1:exon

LOC113882642
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113882642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113882642
translation: MGDQDLPGVLVSDLEGPHGICEDHAEDLKRHFNLITMQDFLENKAQLGPQIQAVYIWCGRPAVSQELLHSLPSLKIVASAGAGLDHLDLGLVASFGVKVANTPHAVSSPTADLGMALLLAAARRVVEGHQLAVSPHTENFPTDYMGQQVTGATLGIIGMGSIGYKIAQRARAFEMKIVYHNRKRRKLEEEEAVGAIYCERLDDLLQWSDFVMLAVSLTPQTQGLIGKRELRLMKPTAILINIGRGLLVDQEALVEALQTGLIKAAALDVTYPEPLPRDHPLLELKNVILTPHIGSATHQARRQMMENLVESILASLSGLPIPNEVLLK
SIO_010081: LOC113882642
subclass of: SO_0000673
so part of: LOC113882642
location: complement(join(707355..707511,712203..712299,713656..713834,715269..715440,716340..716721))
location: region:707355-716721:-1
so has part: feature:716340-716721:-1:exon
so has part: feature:715269-715440:-1:exon
so has part: feature:713656-713834:-1:exon
so has part: feature:712203-712299:-1:exon
so has part: feature:707355-707511:-1:exon

XP_027381394.1
type: Protein
SIO_000068: ncbiprotein

position:707355:-1
position: 707355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716721:-1
position: 716721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716340-716721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:715269-715440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713656-713834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:712203-712299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:707355-707511:-1:exon

LOC113882642
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113882642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113882642
translation: MGDQDLPGVLVSDLEGPHGICEDHAEDLKRHFNLITMQDFLENKAQLGPQIQAVYIWCGRPAVSQELLHSLPSLKIVASAGAGLDHLDLGLVASFGVKVANTPHAVSSPTADLGMALLLAAARRVVEGHQLAVSPHTENFPTDYMGQQVTGATLGIIGMGSIGYKIAQRARAFEMKIVYHNRKRRKLEEEEAVGAIYCERLDDLLQWSDFVMLAVSLTPQTQGLIGKRELRLMKPTAILINIGRGLLVDQEALVEALQTGLIKAAALDVTYPEPLPRDHPLLELKNVILTPHIGSATHQARRQMMENLVESILASLSGLPIPNEVLLK
SIO_010081: LOC113882642
subclass of: SO_0000673
so part of: LOC113882642
location: complement(join(707355..707511,712203..712299,713656..713834,715269..715440,716340..716721))
location: region:707355-716721:-1
so has part: feature:716340-716721:-1:exon
so has part: feature:715269-715440:-1:exon
so has part: feature:713656-713834:-1:exon
so has part: feature:712203-712299:-1:exon
so has part: feature:707355-707511:-1:exon

XP_027381395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:716340-716721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:715269-715440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713656-713834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:712203-712299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:707355-707511:-1:exon

LOC113882642
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113882642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113882642
translation: MGDQDLPGVLVSDLEGPHGICEDHAEDLKRHFNLITMQDFLENKAQLGPQIQAVYIWCGRPAVSQELLHSLPSLKIVASAGAGLDHLDLGLVASFGVKVANTPHAVSSPTADLGMALLLAAARRVVEGHQLAVSPHTENFPTDYMGQQVTGATLGIIGMGSIGYKIAQRARAFEMKIVYHNRKRRKLEEEEAVGAIYCERLDDLLQWSDFVMLAVSLTPQTQGLIGKRELRLMKPTAILINIGRGLLVDQEALVEALQTGLIKAAALDVTYPEPLPRDHPLLELKNVILTPHIGSATHQARRQMMENLVESILASLSGLPIPNEVLLK
SIO_010081: LOC113882642
subclass of: SO_0000673
so part of: LOC113882642
location: complement(join(707355..707511,712203..712299,713656..713834,715269..715440,716340..716721))
location: region:707355-716721:-1
so has part: feature:716340-716721:-1:exon
so has part: feature:715269-715440:-1:exon
so has part: feature:713656-713834:-1:exon
so has part: feature:712203-712299:-1:exon
so has part: feature:707355-707511:-1:exon

XP_027381396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:716340-716721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:715269-715440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713656-713834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:712203-712299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:707355-707511:-1:exon

LOC113882642
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113882642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113882642
translation: MGDQDLPGVLVSDLEGPHGICEDHAEDLKRHFNLITMQDFLENKAQLGPQIQAVYIWCGRPAVSQELLHSLPSLKIVASAGAGLDHLDLGLVASFGVKVANTPHAVSSPTADLGMALLLAAARRVVEGHQLAVSPHTENFPTDYMGQQVTGATLGIIGMGSIGYKIAQRARAFEMKIVYHNRKRRKLEEEEAVGAIYCERLDDLLQWSDFVMLAVSLTPQTQGLIGKRELRLMKPTAILINIGRGLLVDQEALVEALQTGLIKAAALDVTYPEPLPRDHPLLELKNVILTPHIGSATHQARRQMMENLVESILASLSGLPIPNEVLLK
SIO_010081: LOC113882642
subclass of: SO_0000673
so part of: LOC113882642
location: complement(join(707355..707511,712203..712299,713656..713834,715269..715440,716340..716721))
location: region:707355-716721:-1
so has part: feature:716340-716721:-1:exon
so has part: feature:715269-715440:-1:exon
so has part: feature:713656-713834:-1:exon
so has part: feature:712203-712299:-1:exon
so has part: feature:707355-707511:-1:exon

XP_027381397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:716340-716721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:715269-715440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713656-713834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:712203-712299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:707355-707511:-1:exon

TXNL4A
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 738961..749951
location: region:738961-749951:1
so has part: feature:738961-749951:1:exon
subclass of: SO_0000010

113882621
type: Gene
SIO_000068: ncbigene

position:738961:1
position: 738961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749951:1
position: 749951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738961-749951:1:exon

TXNL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TXNL4A
product: thioredoxin like 4A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 145 samples with support for all annotated introns
transcript id: XM_027525562.1
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(738961..739134,739443..739610,745623..745726,749521..749932)
location: region:738961-749932:1
so has part: feature:738961-739134:1:exon
so has part: feature:739443-739610:1:exon
so has part: feature:745623-745726:1:exon
so has part: feature:749521-749932:1:exon

position:749932:1
position: 749932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738961-739134:1:exon

position:739134:1
position: 739134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:739443-739610:1:exon

position:739443:1
position: 739443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739610:1
position: 739610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:745623-745726:1:exon

position:745623:1
position: 745623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745726:1
position: 745726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:749521-749932:1:exon

position:749521:1
position: 749521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TXNL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TXNL4A
product: thioredoxin like 4A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 ESTs, 2 long SRA reads, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 214 samples with support for all annotated introns
transcript id: XM_027525561.1
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(738962..739084,739443..739610,745623..745726,749521..749951)
location: region:738962-749951:1
so has part: feature:738962-739084:1:exon
so has part: feature:739443-739610:1:exon
so has part: feature:745623-745726:1:exon
so has part: feature:749521-749951:1:exon

position:738962:1
position: 738962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738962-739084:1:exon

position:739084:1
position: 739084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:739443-739610:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:745623-745726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:749521-749951:1:exon

TXNL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TXNL4A
product: thioredoxin like 4A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 163 samples with support for all annotated introns
transcript id: XM_027525565.1
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(738963..739084,739443..739689,745623..745726,749521..749932)
location: region:738963-749932:1
so has part: feature:738963-739084:1:exon
so has part: feature:739443-739689:1:exon
so has part: feature:745623-745726:1:exon
so has part: feature:749521-749932:1:exon

position:738963:1
position: 738963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738963-739084:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:739443-739689:1:exon

position:739689:1
position: 739689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:745623-745726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:749521-749932:1:exon

TXNL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TXNL4A
product: thioredoxin like 4A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 200 samples with support for all annotated introns
transcript id: XM_027525563.1
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(738963..739084,739443..739610,741684..741753,745623..745726,749521..749932)
location: region:738963-749932:1
so has part: feature:738963-739084:1:exon
so has part: feature:739443-739610:1:exon
so has part: feature:741684-741753:1:exon
so has part: feature:745623-745726:1:exon
so has part: feature:749521-749932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:738963-739084:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:739443-739610:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:741684-741753:1:exon

position:741684:1
position: 741684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741753:1
position: 741753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:745623-745726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:749521-749932:1:exon

TXNL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X1
translation: MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(739458..739610,745623..745726,749521..749692)
location: region:739458-749692:1
so has part: feature:739458-739610:1:exon
so has part: feature:745623-745726:1:exon
so has part: feature:749521-749692:1:exon

XP_027381362.1
type: Protein
SIO_000068: ncbiprotein

position:739458:1
position: 739458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749692:1
position: 749692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:739458-739610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745623-745726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:749521-749692:1:exon

TXNL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X1
translation: MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(739458..739610,745623..745726,749521..749692)
location: region:739458-749692:1
so has part: feature:739458-739610:1:exon
so has part: feature:745623-745726:1:exon
so has part: feature:749521-749692:1:exon

XP_027381363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:739458-739610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745623-745726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:749521-749692:1:exon

TXNL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TXNL4A
product: thioredoxin like 4A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 163 samples with support for all annotated introns
transcript id: XM_027525564.1
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(741123..741265,741684..741753,745623..745726,749521..749932)
location: region:741123-749932:1
so has part: feature:741123-741265:1:exon
so has part: feature:741684-741753:1:exon
so has part: feature:745623-745726:1:exon
so has part: feature:749521-749932:1:exon

position:741123:1
position: 741123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741123-741265:1:exon

position:741265:1
position: 741265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:741684-741753:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:745623-745726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:749521-749932:1:exon

TXNL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X2
translation: MYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(745683..745726,749521..749692)
location: region:745683-749692:1
so has part: feature:745683-745726:1:exon
so has part: feature:749521-749692:1:exon

XP_027381364.1
type: Protein
SIO_000068: ncbiprotein

position:745683:1
position: 745683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745683-745726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:749521-749692:1:exon

TXNL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X2
translation: MYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(745683..745726,749521..749692)
location: region:745683-749692:1
so has part: feature:745683-745726:1:exon
so has part: feature:749521-749692:1:exon

XP_027381365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:745683-745726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:749521-749692:1:exon

TXNL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X2
translation: MYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(745683..745726,749521..749692)
location: region:745683-749692:1
so has part: feature:745683-745726:1:exon
so has part: feature:749521-749692:1:exon

XP_027381366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:745683-745726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:749521-749692:1:exon

HSBP1L1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: HSBP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(748564..763812)
location: region:748564-763812:-1
so has part: feature:748564-763812:-1:exon
subclass of: SO_0000010

113882622
type: Gene
SIO_000068: ncbigene

position:748564:-1
position: 748564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763812:-1
position: 763812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748564-763812:-1:exon

HSBP1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: HSBP1L1
product: heat shock factor binding protein 1 like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_027525566.1
SIO_010081: HSBP1L1
subclass of: SO_0000673
so part of: HSBP1L1
location: complement(join(748564..748977,760203..760296,761276..761342,763083..763812))
location: region:748564-763812:-1
so has part: feature:763083-763812:-1:exon
so has part: feature:761276-761342:-1:exon
so has part: feature:760203-760296:-1:exon
so has part: feature:748564-748977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:763083-763812:-1:exon

position:763083:-1
position: 763083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:761276-761342:-1:exon

position:761276:-1
position: 761276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761342:-1
position: 761342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:760203-760296:-1:exon

position:760203:-1
position: 760203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760296:-1
position: 760296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:748564-748977:-1:exon

position:748977:-1
position: 748977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSBP1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: HSBP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor-binding protein 1-like protein 1 isoform X1
translation: MDARSPEAPGGRALRDVAENLFQELQEHFQALTATLNLRMEEMGGRIEDLQKNVNDLMAQAGIDSPAQKHRLCVWLPAVVSCCRLHLGLQ
SIO_010081: HSBP1L1
subclass of: SO_0000673
so part of: HSBP1L1
location: complement(join(748917..748977,760203..760296,761276..761342,763083..763133))
location: region:748917-763133:-1
so has part: feature:763083-763133:-1:exon
so has part: feature:761276-761342:-1:exon
so has part: feature:760203-760296:-1:exon
so has part: feature:748917-748977:-1:exon

XP_027381367.1
type: Protein
SIO_000068: ncbiprotein

position:748917:-1
position: 748917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763133:-1
position: 763133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763083-763133:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761276-761342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760203-760296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:748917-748977:-1:exon

HSBP1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: HSBP1L1
product: heat shock factor binding protein 1 like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_027525567.1
SIO_010081: HSBP1L1
subclass of: SO_0000673
so part of: HSBP1L1
location: complement(join(752549..753477,760203..760296,761276..761342,763083..763807))
location: region:752549-763807:-1
so has part: feature:763083-763807:-1:exon
so has part: feature:761276-761342:-1:exon
so has part: feature:760203-760296:-1:exon
so has part: feature:752549-753477:-1:exon

position:752549:-1
position: 752549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763807:-1
position: 763807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763083-763807:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761276-761342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760203-760296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:752549-753477:-1:exon

position:753477:-1
position: 753477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSBP1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: HSBP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor-binding protein 1-like protein 1 isoform X2
translation: MDARSPEAPGGRALRDVAENLFQELQEHFQALTATLNLRMEEMGGRIEDLQKNVNDLMAQAGIDSPAQKHRLVASVSAALSSPWTFQ
SIO_010081: HSBP1L1
subclass of: SO_0000673
so part of: HSBP1L1
location: complement(join(753426..753477,760203..760296,761276..761342,763083..763133))
location: region:753426-763133:-1
so has part: feature:763083-763133:-1:exon
so has part: feature:761276-761342:-1:exon
so has part: feature:760203-760296:-1:exon
so has part: feature:753426-753477:-1:exon

XP_027381368.1
type: Protein
SIO_000068: ncbiprotein

position:753426:-1
position: 753426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763083-763133:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761276-761342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760203-760296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:753426-753477:-1:exon

HSBP1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: HSBP1L1
product: heat shock factor binding protein 1 like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns
transcript id: XM_027525568.1
SIO_010081: HSBP1L1
subclass of: SO_0000673
so part of: HSBP1L1
location: complement(join(756962..757763,760203..760296,761276..761342,763083..763599))
location: region:756962-763599:-1
so has part: feature:763083-763599:-1:exon
so has part: feature:761276-761342:-1:exon
so has part: feature:760203-760296:-1:exon
so has part: feature:756962-757763:-1:exon

position:756962:-1
position: 756962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763599:-1
position: 763599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763083-763599:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761276-761342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760203-760296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756962-757763:-1:exon

position:757763:-1
position: 757763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSBP1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: HSBP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor-binding protein 1-like protein 1 isoform X3
translation: MDARSPEAPGGRALRDVAENLFQELQEHFQALTATLNLRMEEMGGRIEDLQKNVNDLMAQAGIDSPAQKHRLEDRTVI
SIO_010081: HSBP1L1
subclass of: SO_0000673
so part of: HSBP1L1
location: complement(join(757739..757763,760203..760296,761276..761342,763083..763133))
location: region:757739-763133:-1
so has part: feature:763083-763133:-1:exon
so has part: feature:761276-761342:-1:exon
so has part: feature:760203-760296:-1:exon
so has part: feature:757739-757763:-1:exon

XP_027381369.1
type: Protein
SIO_000068: ncbiprotein

position:757739:-1
position: 757739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763083-763133:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761276-761342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760203-760296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:757739-757763:-1:exon

LOC113882632
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882632
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(768879..770101)
location: region:768879-770101:-1
so has part: feature:768879-770101:-1:exon
subclass of: SO_0000011

113882632
type: Gene
SIO_000068: ncbigene

position:768879:-1
position: 768879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770101:-1
position: 770101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:768879-770101:-1:exon

LOC113882632
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882632
product: uncharacterized LOC113882632
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XR_003508405.1
SIO_010081: LOC113882632
subclass of: SO_0000673
so part of: LOC113882632
location: complement(join(768879..769077,770018..770101))
location: region:768879-770101:-1
so has part: feature:770018-770101:-1:exon
so has part: feature:768879-769077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:770018-770101:-1:exon

position:770018:-1
position: 770018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:768879-769077:-1:exon

position:769077:-1
position: 769077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PQLC1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: PQLC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 769550..811173
location: region:769550-811173:1
so has part: feature:769550-811173:1:exon
subclass of: SO_0000010

113882630
type: Gene
SIO_000068: ncbigene

position:769550:1
position: 769550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811173:1
position: 811173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769550-811173:1:exon

PQLC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: PQLC1
product: PQ loop repeat containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 146 samples with support for all annotated introns
transcript id: XM_027525580.1
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(769550..769646,770036..770369,775014..775147,796977..797193,809656..811173)
location: region:769550-811173:1
so has part: feature:769550-769646:1:exon
so has part: feature:770036-770369:1:exon
so has part: feature:775014-775147:1:exon
so has part: feature:796977-797193:1:exon
so has part: feature:809656-811173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:769550-769646:1:exon

position:769646:1
position: 769646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770036-770369:1:exon

position:770036:1
position: 770036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770369:1
position: 770369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:775014-775147:1:exon

position:775014:1
position: 775014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775147:1
position: 775147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:796977-797193:1:exon

position:796977:1
position: 796977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797193:1
position: 797193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:809656-811173:1:exon

position:809656:1
position: 809656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PQLC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: PQLC1
product: PQ loop repeat containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 35 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_027525581.1
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(769604..769717,770036..770369,775014..775147,796977..797193,809656..811173)
location: region:769604-811173:1
so has part: feature:769604-769717:1:exon
so has part: feature:770036-770369:1:exon
so has part: feature:775014-775147:1:exon
so has part: feature:796977-797193:1:exon
so has part: feature:809656-811173:1:exon

position:769604:1
position: 769604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769604-769717:1:exon

position:769717:1
position: 769717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770036-770369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:775014-775147:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796977-797193:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:809656-811173:1:exon

PQLC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: PQLC1
product: PQ loop repeat containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 203 samples with support for all annotated introns
transcript id: XM_027525579.1
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(770146..770369,775014..775147,782880..782933,796977..797193,809656..811173)
location: region:770146-811173:1
so has part: feature:770146-770369:1:exon
so has part: feature:775014-775147:1:exon
so has part: feature:782880-782933:1:exon
so has part: feature:796977-797193:1:exon
so has part: feature:809656-811173:1:exon

position:770146:1
position: 770146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770146-770369:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775014-775147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782880-782933:1:exon

position:782880:1
position: 782880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782933:1
position: 782933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:796977-797193:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:809656-811173:1:exon

PQLC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: PQLC1
product: PQ loop repeat containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_027525582.1
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(770146..770369,775014..775147,809656..809968)
location: region:770146-809968:1
so has part: feature:770146-770369:1:exon
so has part: feature:775014-775147:1:exon
so has part: feature:809656-809968:1:exon

position:809968:1
position: 809968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770146-770369:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775014-775147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809656-809968:1:exon

PQLC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: PQLC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PQ-loop repeat-containing protein 1 isoform X1
translation: MEAEGLGWLLVPLHQLVSWGAAGAMVFGGVVPYIPQYRDIRRTQNAEGFSTYVCLVLLVANILRILFWFGRHFESPLLWQSVVMILTMLLMLKLCTEVRVANELNLKRRVFSAADNKDGEVRVPLGRSFLDFDPHHFWHWSSFADYVQCVLAFTGVAGYITYLSIDSALFVETLGFLAVLTEAMLGVPQLYRNHRHQSTEGMSIKMVLMWTSGDTFKTAYFLLNGAPLQFSVCGLLQVLVDLAILGQAYVFTRYPLKPAPHAAHPASAKAL
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(770167..770369,775014..775147,782880..782933,796977..797193,809656..809863)
location: region:770167-809863:1
so has part: feature:770167-770369:1:exon
so has part: feature:775014-775147:1:exon
so has part: feature:782880-782933:1:exon
so has part: feature:796977-797193:1:exon
so has part: feature:809656-809863:1:exon

XP_027381380.1
type: Protein
SIO_000068: ncbiprotein

position:770167:1
position: 770167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809863:1
position: 809863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770167-770369:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775014-775147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782880-782933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:796977-797193:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:809656-809863:1:exon

PQLC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: PQLC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PQ-loop repeat-containing protein 1 isoform X2
translation: MEAEGLGWLLVPLHQLVSWGAAGAMVFGGVVPYIPQYRDIRRTQNAEGFSTYVCLVLLVANILRILFWFGRHFESPLLWQSVVMILTMLLMLKLCTEVRVANELNLKRRVFSDFDPHHFWHWSSFADYVQCVLAFTGVAGYITYLSIDSALFVETLGFLAVLTEAMLGVPQLYRNHRHQSTEGMSIKMVLMWTSGDTFKTAYFLLNGAPLQFSVCGLLQVLVDLAILGQAYVFTRYPLKPAPHAAHPASAKAL
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(770167..770369,775014..775147,796977..797193,809656..809863)
location: region:770167-809863:1
so has part: feature:770167-770369:1:exon
so has part: feature:775014-775147:1:exon
so has part: feature:796977-797193:1:exon
so has part: feature:809656-809863:1:exon

XP_027381381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:770167-770369:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775014-775147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:796977-797193:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809656-809863:1:exon

PQLC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: PQLC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PQ-loop repeat-containing protein 1 isoform X2
translation: MEAEGLGWLLVPLHQLVSWGAAGAMVFGGVVPYIPQYRDIRRTQNAEGFSTYVCLVLLVANILRILFWFGRHFESPLLWQSVVMILTMLLMLKLCTEVRVANELNLKRRVFSDFDPHHFWHWSSFADYVQCVLAFTGVAGYITYLSIDSALFVETLGFLAVLTEAMLGVPQLYRNHRHQSTEGMSIKMVLMWTSGDTFKTAYFLLNGAPLQFSVCGLLQVLVDLAILGQAYVFTRYPLKPAPHAAHPASAKAL
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(770167..770369,775014..775147,796977..797193,809656..809863)
location: region:770167-809863:1
so has part: feature:770167-770369:1:exon
so has part: feature:775014-775147:1:exon
so has part: feature:796977-797193:1:exon
so has part: feature:809656-809863:1:exon

XP_027381382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:770167-770369:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775014-775147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:796977-797193:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809656-809863:1:exon

PQLC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: PQLC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PQ-loop repeat-containing protein 1 isoform X3
translation: MEAEGLGWLLVPLHQLVSWGAAGAMVFGGVVPYIPQYRDIRRTQNAEGFSTYVCLVLLVANILRILFWFGRHFESPLLWQSVVMILTMLLMLKLCTEVRVANELNLKRRVFSASRWSSCGRVATPSRRPTSC
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(770167..770369,775014..775147,809656..809717)
location: region:770167-809717:1
so has part: feature:770167-770369:1:exon
so has part: feature:775014-775147:1:exon
so has part: feature:809656-809717:1:exon

XP_027381383.1
type: Protein
SIO_000068: ncbiprotein

position:809717:1
position: 809717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770167-770369:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775014-775147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809656-809717:1:exon

KCNG2
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: KCNG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(814225..866704)
location: region:814225-866704:-1
so has part: feature:814225-866704:-1:exon
subclass of: SO_0000010

113882629
type: Gene
SIO_000068: ncbigene

position:814225:-1
position: 814225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866704:-1
position: 866704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814225-866704:-1:exon

KCNG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: KCNG2
product: potassium voltage-gated channel modifier subfamily G member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_027525578.1
SIO_010081: KCNG2
subclass of: SO_0000673
so part of: KCNG2
location: complement(join(814225..815320,835862..836530,866620..866704))
location: region:814225-866704:-1
so has part: feature:866620-866704:-1:exon
so has part: feature:835862-836530:-1:exon
so has part: feature:814225-815320:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:866620-866704:-1:exon

position:866620:-1
position: 866620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:835862-836530:-1:exon

position:835862:-1
position: 835862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836530:-1
position: 836530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:814225-815320:-1:exon

position:815320:-1
position: 815320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: KCNG2
product: potassium voltage-gated channel modifier subfamily G member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_027525577.1
SIO_010081: KCNG2
subclass of: SO_0000673
so part of: KCNG2
location: complement(join(814225..815320,835862..839889))
location: region:814225-839889:-1
so has part: feature:835862-839889:-1:exon
so has part: feature:814225-815320:-1:exon

position:839889:-1
position: 839889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835862-839889:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:814225-815320:-1:exon

KCNG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: KCNG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily G member 2 isoform X1
translation: MLSVPLQAQPPDPGAAHGAMALLPGPAERRGGGGGARARHVIINVGGCRVRLAWAALARCPLARLERLRTCRGHDELLRVCDDYDVSRDEFFFDRSPCAFRAIVALLRAGKLRLLRGPCALAFRDELAYWGIDEARLERCCLRRLRRREEEAAEARAGPAERGAPGSPACTPRPGGRLARGRRRLRDVVDDPRSGPAGKLFACVSVAFVAVTAVGLCLSTMPDIRAEEERGECSPKCRNLFVLETVCVAWFSFEFLLRSLQAESKCAFLRTPLNIIDILAILPFYVSLLVGLAARPGAGGNKLLERAGLVLRLLRALRVLYVMRLARHSLGLRSLGLTVRRCAREFGLLLLFLCVAMALFAPLVHLAERELGARRDFSSVPASYWWAVISMTTVGYGDMVPRSLPGQVVALSSILSGILLMAFPVTSIFHTFSRSYSELKEQQQRAASPEPALREDSTRSASASATATEDDGSQSPDGAGSAGASAEGPWAPAGPT
SIO_010081: KCNG2
subclass of: SO_0000673
so part of: KCNG2
location: complement(join(814520..815320,835862..836551))
location: region:814520-836551:-1
so has part: feature:835862-836551:-1:exon
so has part: feature:814520-815320:-1:exon

XP_027381378.1
type: Protein
SIO_000068: ncbiprotein

position:814520:-1
position: 814520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836551:-1
position: 836551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835862-836551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:814520-815320:-1:exon

KCNG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: KCNG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily G member 2 isoform X2
translation: MALLPGPAERRGGGGGARARHVIINVGGCRVRLAWAALARCPLARLERLRTCRGHDELLRVCDDYDVSRDEFFFDRSPCAFRAIVALLRAGKLRLLRGPCALAFRDELAYWGIDEARLERCCLRRLRRREEEAAEARAGPAERGAPGSPACTPRPGGRLARGRRRLRDVVDDPRSGPAGKLFACVSVAFVAVTAVGLCLSTMPDIRAEEERGECSPKCRNLFVLETVCVAWFSFEFLLRSLQAESKCAFLRTPLNIIDILAILPFYVSLLVGLAARPGAGGNKLLERAGLVLRLLRALRVLYVMRLARHSLGLRSLGLTVRRCAREFGLLLLFLCVAMALFAPLVHLAERELGARRDFSSVPASYWWAVISMTTVGYGDMVPRSLPGQVVALSSILSGILLMAFPVTSIFHTFSRSYSELKEQQQRAASPEPALREDSTRSASASATATEDDGSQSPDGAGSAGASAEGPWAPAGPT
SIO_010081: KCNG2
subclass of: SO_0000673
so part of: KCNG2
location: complement(join(814520..815320,835862..836494))
location: region:814520-836494:-1
so has part: feature:835862-836494:-1:exon
so has part: feature:814520-815320:-1:exon

XP_027381379.1
type: Protein
SIO_000068: ncbiprotein

position:836494:-1
position: 836494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835862-836494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:814520-815320:-1:exon

CTDP1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: CTDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(886300..912174)
location: region:886300-912174:-1
so has part: feature:886300-912174:-1:exon
subclass of: SO_0000010

113882695
type: Gene
SIO_000068: ncbigene

position:886300:-1
position: 886300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912174:-1
position: 912174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886300-912174:-1:exon

CTDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CTDP1
product: CTD phosphatase subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 160 samples with support for all annotated introns
transcript id: XM_027525759.1
SIO_010081: CTDP1
subclass of: SO_0000673
so part of: CTDP1
location: complement(join(886300..887100,891436..891587,892781..892943,897681..897881,898460..898601,898839..899816,900582..900748,902287..902377,903256..903406,904816..904944,906142..906235,906740..906823,911738..912174))
location: region:886300-912174:-1
so has part: feature:911738-912174:-1:exon
so has part: feature:906740-906823:-1:exon
so has part: feature:906142-906235:-1:exon
so has part: feature:904816-904944:-1:exon
so has part: feature:903256-903406:-1:exon
so has part: feature:902287-902377:-1:exon
so has part: feature:900582-900748:-1:exon
so has part: feature:898839-899816:-1:exon
so has part: feature:898460-898601:-1:exon
so has part: feature:897681-897881:-1:exon
so has part: feature:892781-892943:-1:exon
so has part: feature:891436-891587:-1:exon
so has part: feature:886300-887100:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:911738-912174:-1:exon

position:911738:-1
position: 911738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:906740-906823:-1:exon

position:906740:-1
position: 906740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906823:-1
position: 906823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:906142-906235:-1:exon

position:906142:-1
position: 906142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906235:-1
position: 906235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:904816-904944:-1:exon

position:904816:-1
position: 904816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904944:-1
position: 904944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:903256-903406:-1:exon

position:903256:-1
position: 903256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903406:-1
position: 903406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:902287-902377:-1:exon

position:902287:-1
position: 902287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902377:-1
position: 902377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:900582-900748:-1:exon

position:900582:-1
position: 900582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900748:-1
position: 900748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:898839-899816:-1:exon

position:898839:-1
position: 898839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899816:-1
position: 899816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:898460-898601:-1:exon

position:898460:-1
position: 898460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898601:-1
position: 898601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:897681-897881:-1:exon

position:897681:-1
position: 897681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897881:-1
position: 897881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:892781-892943:-1:exon

position:892781:-1
position: 892781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892943:-1
position: 892943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:891436-891587:-1:exon

position:891436:-1
position: 891436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891587:-1
position: 891587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:886300-887100:-1:exon

position:887100:-1
position: 887100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CTDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CTDP1
product: CTD phosphatase subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_027525760.1
SIO_010081: CTDP1
subclass of: SO_0000673
so part of: CTDP1
location: complement(join(886300..887100,891436..891587,892781..892943,897681..897881,898460..898601,898839..899816,900582..900748,902287..902377,903256..903406,904816..904944,906142..906235,906740..906823,909552..909640,911738..911812))
location: region:886300-911812:-1
so has part: feature:911738-911812:-1:exon
so has part: feature:909552-909640:-1:exon
so has part: feature:906740-906823:-1:exon
so has part: feature:906142-906235:-1:exon
so has part: feature:904816-904944:-1:exon
so has part: feature:903256-903406:-1:exon
so has part: feature:902287-902377:-1:exon
so has part: feature:900582-900748:-1:exon
so has part: feature:898839-899816:-1:exon
so has part: feature:898460-898601:-1:exon
so has part: feature:897681-897881:-1:exon
so has part: feature:892781-892943:-1:exon
so has part: feature:891436-891587:-1:exon
so has part: feature:886300-887100:-1:exon

position:911812:-1
position: 911812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:911738-911812:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:909552-909640:-1:exon

position:909552:-1
position: 909552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909640:-1
position: 909640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:906740-906823:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:906142-906235:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:904816-904944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:903256-903406:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:902287-902377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:900582-900748:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:898839-899816:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:898460-898601:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:897681-897881:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:892781-892943:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:891436-891587:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886300-887100:-1:exon

CTDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CTDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
translation: MEAPPGGRLPSEGSQPPAVAEVRCPGPGPLRLLQWRVAAGAAVRIGSVLAVCEAAASTQPPGPAPVRTGSGGCVRAERRLRSERAGVVRELCAQPGQVVAPGAVLVRLEGCSHPVVMKGLCAECGQDLTQLQSENGRPQVPLSTATVSMVHSVPELMVSSEQAEKLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKVARLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYFQGIGDIHAPSAPREPPARKRGADAAEQPLSIRDPEEGRPASTVESNGLGRPARELNGGPGPRGCWPCQEEERGPRPTARTPSADGRGTSAGNLPRGKTPPEKRPVRGPAGPDADPDVPSDSGSSSESEGQPSPAPSDGESGERRTRRKPQAARDAGKAMLQGGPPGPAGERLAGANHCGEPSPGVPADAQEDGERDGLCALGGGCADRKEAETESQNSEQSGITVGESLDQSMEEEEEEDADDDDHLVHLEEILSRVHSDYYAKYDRFLSGESPEAPDIRKIVPELRSKVLADVAIIFSGLHPTNFPVERTREHYHARALGARILTQLVLDPDDPARPTHLIAARAGTEKVRQAQECGQLHVVNPDWLWSCLERWDRVEEQLFPLRDDQGRTQREDSPASFPDRQSLVPTALFHPTPVHPKAPPGPEVRIYDASTGKLIRTATSGPGPPGALPHAGLSSFRAVQPRPQQVFGDDLPDRQDGEQPGPSRRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGSDDSDSEKKPPEEEEPGRGPPEALGVPRGRRLERSAGDNRGLRGHKRKLNEEDAASESSGASSCEDEEGGSSEADEMAAALEAELGDLM
SIO_010081: CTDP1
subclass of: SO_0000673
so part of: CTDP1
location: complement(join(886959..887100,891436..891587,892781..892943,897681..897881,898460..898601,898839..899816,900582..900748,902287..902377,903256..903406,904816..904944,906142..906235,906740..906823,911738..912042))
location: region:886959-912042:-1
so has part: feature:911738-912042:-1:exon
so has part: feature:906740-906823:-1:exon
so has part: feature:906142-906235:-1:exon
so has part: feature:904816-904944:-1:exon
so has part: feature:903256-903406:-1:exon
so has part: feature:902287-902377:-1:exon
so has part: feature:900582-900748:-1:exon
so has part: feature:898839-899816:-1:exon
so has part: feature:898460-898601:-1:exon
so has part: feature:897681-897881:-1:exon
so has part: feature:892781-892943:-1:exon
so has part: feature:891436-891587:-1:exon
so has part: feature:886959-887100:-1:exon

XP_027381560.1
type: Protein
SIO_000068: ncbiprotein

position:886959:-1
position: 886959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912042:-1
position: 912042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:911738-912042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:906740-906823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:906142-906235:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:904816-904944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:903256-903406:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:902287-902377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:900582-900748:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:898839-899816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:898460-898601:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:897681-897881:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892781-892943:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:891436-891587:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:886959-887100:-1:exon

CTDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CTDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II subunit A C-terminal domain phosphatase isoform X2
translation: MDKDRHRRRLCRAVLVRLEGCSHPVVMKGLCAECGQDLTQLQSENGRPQVPLSTATVSMVHSVPELMVSSEQAEKLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKVARLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYFQGIGDIHAPSAPREPPARKRGADAAEQPLSIRDPEEGRPASTVESNGLGRPARELNGGPGPRGCWPCQEEERGPRPTARTPSADGRGTSAGNLPRGKTPPEKRPVRGPAGPDADPDVPSDSGSSSESEGQPSPAPSDGESGERRTRRKPQAARDAGKAMLQGGPPGPAGERLAGANHCGEPSPGVPADAQEDGERDGLCALGGGCADRKEAETESQNSEQSGITVGESLDQSMEEEEEEDADDDDHLVHLEEILSRVHSDYYAKYDRFLSGESPEAPDIRKIVPELRSKVLADVAIIFSGLHPTNFPVERTREHYHARALGARILTQLVLDPDDPARPTHLIAARAGTEKVRQAQECGQLHVVNPDWLWSCLERWDRVEEQLFPLRDDQGRTQREDSPASFPDRQSLVPTALFHPTPVHPKAPPGPEVRIYDASTGKLIRTATSGPGPPGALPHAGLSSFRAVQPRPQQVFGDDLPDRQDGEQPGPSRRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGSDDSDSEKKPPEEEEPGRGPPEALGVPRGRRLERSAGDNRGLRGHKRKLNEEDAASESSGASSCEDEEGGSSEADEMAAALEAELGDLM
SIO_010081: CTDP1
subclass of: SO_0000673
so part of: CTDP1
location: complement(join(886959..887100,891436..891587,892781..892943,897681..897881,898460..898601,898839..899816,900582..900748,902287..902377,903256..903406,904816..904944,906142..906235,906740..906823,909552..909586))
location: region:886959-909586:-1
so has part: feature:909552-909586:-1:exon
so has part: feature:906740-906823:-1:exon
so has part: feature:906142-906235:-1:exon
so has part: feature:904816-904944:-1:exon
so has part: feature:903256-903406:-1:exon
so has part: feature:902287-902377:-1:exon
so has part: feature:900582-900748:-1:exon
so has part: feature:898839-899816:-1:exon
so has part: feature:898460-898601:-1:exon
so has part: feature:897681-897881:-1:exon
so has part: feature:892781-892943:-1:exon
so has part: feature:891436-891587:-1:exon
so has part: feature:886959-887100:-1:exon

XP_027381561.1
type: Protein
SIO_000068: ncbiprotein

position:909586:-1
position: 909586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909552-909586:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:906740-906823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:906142-906235:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:904816-904944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:903256-903406:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:902287-902377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:900582-900748:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:898839-899816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:898460-898601:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:897681-897881:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892781-892943:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:891436-891587:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:886959-887100:-1:exon

LOC113882590
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <912149..916935
location: region:912149-916935:1
so has part: feature:912149-916935:1:exon
subclass of: SO_0000010

113882590
type: Gene
SIO_000068: ncbigene

position:912149:1
position: 912149
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:916935:1
position: 916935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:912149-916935:1:exon

LOC113882590
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113882590
product: uncharacterized LOC113882590
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027525507.1
SIO_010081: LOC113882590
subclass of: SO_0000673
so part of: LOC113882590
location: <912149..916935
location: region:912149-916935:1
so has part: feature:912149-916935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:912149-916935:1:exon

LOC113882590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113882590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC113882590
translation: RCDPQPRTGFHPPPVPRRLPGQRAESRVAARAHAPRAVADARHAGPERPGRSPEPAAAWTARAGLGLLGTGPLRRVHPVSTSIQDWRRQANRAPRAANRVRHCSWTSWDYESRRPARPAGSRVPVWLRESRHATGVSVPQLPAPARGRCQENYKYQYAARPAALSAPRAGWRLRTAGPKTRQSALARSGAASTGTPQRPSSHDPSHHPLRPVVLDCEARRAAAPGIPGCVVNLGVRSGRREPLAQRIPCGAGLGLGCQVPSSPWSACSGVSSGWTFTILSASP
SIO_010081: LOC113882590
subclass of: SO_0000673
so part of: LOC113882590
location: <912149..913000
location: region:912149-913000:1
so has part: feature:912149-913000:1:exon

XP_027381308.1
type: Protein
SIO_000068: ncbiprotein

position:913000:1
position: 913000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:912149-913000:1:exon

NFATC1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: NFATC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(980176..1067307)
location: region:980176-1067307:-1
so has part: feature:980176-1067307:-1:exon
subclass of: SO_0000010

113882716
type: Gene
SIO_000068: ncbigene

position:980176:-1
position: 980176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067307:-1
position: 1067307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980176-1067307:-1:exon

NFATC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: NFATC1
product: nuclear factor of activated T cells 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_027525794.1
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(980176..982002,1005994..1006659,1016930..1017062,1022666..1022721,1028943..1029083,1030101..1030273,1032187..1032389,1043041..1043200,1052920..1053991,1066860..1067307))
location: region:980176-1067307:-1
so has part: feature:1066860-1067307:-1:exon
so has part: feature:1052920-1053991:-1:exon
so has part: feature:1043041-1043200:-1:exon
so has part: feature:1032187-1032389:-1:exon
so has part: feature:1030101-1030273:-1:exon
so has part: feature:1028943-1029083:-1:exon
so has part: feature:1022666-1022721:-1:exon
so has part: feature:1016930-1017062:-1:exon
so has part: feature:1005994-1006659:-1:exon
so has part: feature:980176-982002:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1066860-1067307:-1:exon

position:1066860:-1
position: 1066860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1052920-1053991:-1:exon

position:1052920:-1
position: 1052920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053991:-1
position: 1053991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1043041-1043200:-1:exon

position:1043041:-1
position: 1043041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043200:-1
position: 1043200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1032187-1032389:-1:exon

position:1032187:-1
position: 1032187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032389:-1
position: 1032389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1030101-1030273:-1:exon

position:1030101:-1
position: 1030101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030273:-1
position: 1030273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1028943-1029083:-1:exon

position:1028943:-1
position: 1028943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029083:-1
position: 1029083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1022666-1022721:-1:exon

position:1022666:-1
position: 1022666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022721:-1
position: 1022721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1016930-1017062:-1:exon

position:1016930:-1
position: 1016930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017062:-1
position: 1017062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1005994-1006659:-1:exon

position:1005994:-1
position: 1005994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006659:-1
position: 1006659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:980176-982002:-1:exon

position:982002:-1
position: 982002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFATC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: NFATC1
product: nuclear factor of activated T cells 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_027525796.1
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(980176..982002,1006301..1006659,1016930..1017062,1022666..1022721,1028943..1029083,1030101..1030273,1032187..1032389,1043041..1043200,1052920..1053991,1066860..1067305))
location: region:980176-1067305:-1
so has part: feature:1066860-1067305:-1:exon
so has part: feature:1052920-1053991:-1:exon
so has part: feature:1043041-1043200:-1:exon
so has part: feature:1032187-1032389:-1:exon
so has part: feature:1030101-1030273:-1:exon
so has part: feature:1028943-1029083:-1:exon
so has part: feature:1022666-1022721:-1:exon
so has part: feature:1016930-1017062:-1:exon
so has part: feature:1006301-1006659:-1:exon
so has part: feature:980176-982002:-1:exon

position:1067305:-1
position: 1067305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066860-1067305:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052920-1053991:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043041-1043200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1032187-1032389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1030101-1030273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1028943-1029083:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022666-1022721:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1016930-1017062:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1006301-1006659:-1:exon

position:1006301:-1
position: 1006301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:980176-982002:-1:exon

NFATC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: NFATC1
product: nuclear factor of activated T cells 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_027525795.1
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(980176..982002,1005994..1006659,1016930..1017062,1022666..1022721,1028943..1029083,1030101..1030273,1032187..1032389,1043041..1043200,1052920..1053991,1062284..1062660))
location: region:980176-1062660:-1
so has part: feature:1062284-1062660:-1:exon
so has part: feature:1052920-1053991:-1:exon
so has part: feature:1043041-1043200:-1:exon
so has part: feature:1032187-1032389:-1:exon
so has part: feature:1030101-1030273:-1:exon
so has part: feature:1028943-1029083:-1:exon
so has part: feature:1022666-1022721:-1:exon
so has part: feature:1016930-1017062:-1:exon
so has part: feature:1005994-1006659:-1:exon
so has part: feature:980176-982002:-1:exon

position:1062660:-1
position: 1062660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062284-1062660:-1:exon

position:1062284:-1
position: 1062284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1052920-1053991:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043041-1043200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1032187-1032389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1030101-1030273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1028943-1029083:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022666-1022721:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1016930-1017062:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1005994-1006659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:980176-982002:-1:exon

NFATC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: NFATC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
translation: MPSTSFPVPSKFPLGPPVAVGGSGETLGPSAPAGGTMKSAEEEHYGYAAPGLGAGLPLSAAHPSLPAPCHDLQSSAAGVSAVGYGGAVDSGPSGYFLSSGGIRPNGAPALESPRIEITSYLGLHHNSSQFLHEVDVEDVLPKRSPSTATLNLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESSFSYPYASPQTSPWQSPCVSPKTTDPEEGFARGLGACGLLGSPRHSPSTSPRTSVTEESWLGARTSRPSSPCNKRKYGLNGRQLSCSPHPSPTPSPQGSPRVSVTDDTWLGNTTQYTSSAIVAAINALSTDSSLDLGDGVPVKARKTTLDHSPAVALKVEPAGEDLGTTPPTPDFQPEEFAAFQHIRKGAFCDQYLSVPQHPYPWARPRSPASYTSPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPSVQLHGYVESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEAVVCSTKVLEIPLLPENNMRATIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSAASGPVLGGKRMVLSGHNFLQDSKVIFVEKAPDGHHIWEMEAKTEGDLCKPNSLVVEIPPFRNQRITSPVQVNFYVCNGKRKRSQYQHFTYLPANVPIIKTEPSDDYEPALTCGPMSQGLSPLPKPCYGQPLALPPDPGACLMPGFPPRPQGSASPELHDLSCAPYGSATAGPGHSPLGLPRPVGGVLASQEAPRPSGVPPGPPQPPPPTLLQPQVSPTSSGSCSPGRRPALCPHSPSSPLPPGTRELTRLQPCGPAHPCGTGHQQHQPPEVPSSEPAAARPPPPPEVREDSNRSLAPIPVTVKREPQELDPLDLDDVNEIIRNDLSSTNIHS
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(981953..982002,1005994..1006659,1016930..1017062,1022666..1022721,1028943..1029083,1030101..1030273,1032187..1032389,1043041..1043200,1052920..1053991,1066860..1066986))
location: region:981953-1066986:-1
so has part: feature:1066860-1066986:-1:exon
so has part: feature:1052920-1053991:-1:exon
so has part: feature:1043041-1043200:-1:exon
so has part: feature:1032187-1032389:-1:exon
so has part: feature:1030101-1030273:-1:exon
so has part: feature:1028943-1029083:-1:exon
so has part: feature:1022666-1022721:-1:exon
so has part: feature:1016930-1017062:-1:exon
so has part: feature:1005994-1006659:-1:exon
so has part: feature:981953-982002:-1:exon

XP_027381595.1
type: Protein
SIO_000068: ncbiprotein

position:981953:-1
position: 981953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066986:-1
position: 1066986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066860-1066986:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052920-1053991:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043041-1043200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1032187-1032389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1030101-1030273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1028943-1029083:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022666-1022721:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1016930-1017062:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1005994-1006659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:981953-982002:-1:exon

NFATC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: NFATC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 1 isoform X2
translation: MTGLEEDQEFDFDFLFEFNQSDEGAVAAPAEHYGYAAPGLGAGLPLSAAHPSLPAPCHDLQSSAAGVSAVGYGGAVDSGPSGYFLSSGGIRPNGAPALESPRIEITSYLGLHHNSSQFLHEVDVEDVLPKRSPSTATLNLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESSFSYPYASPQTSPWQSPCVSPKTTDPEEGFARGLGACGLLGSPRHSPSTSPRTSVTEESWLGARTSRPSSPCNKRKYGLNGRQLSCSPHPSPTPSPQGSPRVSVTDDTWLGNTTQYTSSAIVAAINALSTDSSLDLGDGVPVKARKTTLDHSPAVALKVEPAGEDLGTTPPTPDFQPEEFAAFQHIRKGAFCDQYLSVPQHPYPWARPRSPASYTSPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPSVQLHGYVESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEAVVCSTKVLEIPLLPENNMRATIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSAASGPVLGGKRMVLSGHNFLQDSKVIFVEKAPDGHHIWEMEAKTEGDLCKPNSLVVEIPPFRNQRITSPVQVNFYVCNGKRKRSQYQHFTYLPANVPIIKTEPSDDYEPALTCGPMSQGLSPLPKPCYGQPLALPPDPGACLMPGFPPRPQGSASPELHDLSCAPYGSATAGPGHSPLGLPRPVGGVLASQEAPRPSGVPPGPPQPPPPTLLQPQVSPTSSGSCSPGRRPALCPHSPSSPLPPGTRELTRLQPCGPAHPCGTGHQQHQPPEVPSSEPAAARPPPPPEVREDSNRSLAPIPVTVKREPQELDPLDLDDVNEIIRNDLSSTNIHS
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(981953..982002,1005994..1006659,1016930..1017062,1022666..1022721,1028943..1029083,1030101..1030273,1032187..1032389,1043041..1043200,1052920..1053991,1062284..1062374))
location: region:981953-1062374:-1
so has part: feature:1062284-1062374:-1:exon
so has part: feature:1052920-1053991:-1:exon
so has part: feature:1043041-1043200:-1:exon
so has part: feature:1032187-1032389:-1:exon
so has part: feature:1030101-1030273:-1:exon
so has part: feature:1028943-1029083:-1:exon
so has part: feature:1022666-1022721:-1:exon
so has part: feature:1016930-1017062:-1:exon
so has part: feature:1005994-1006659:-1:exon
so has part: feature:981953-982002:-1:exon

XP_027381596.1
type: Protein
SIO_000068: ncbiprotein

position:1062374:-1
position: 1062374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062284-1062374:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052920-1053991:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043041-1043200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1032187-1032389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1030101-1030273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1028943-1029083:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022666-1022721:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1016930-1017062:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1005994-1006659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:981953-982002:-1:exon

NFATC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: NFATC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 1 isoform X3
translation: MPSTSFPVPSKFPLGPPVAVGGSGETLGPSAPAGGTMKSAEEEHYGYAAPGLGAGLPLSAAHPSLPAPCHDLQSSAAGVSAVGYGGAVDSGPSGYFLSSGGIRPNGAPALESPRIEITSYLGLHHNSSQFLHEVDVEDVLPKRSPSTATLNLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESSFSYPYASPQTSPWQSPCVSPKTTDPEEGFARGLGACGLLGSPRHSPSTSPRTSVTEESWLGARTSRPSSPCNKRKYGLNGRQLSCSPHPSPTPSPQGSPRVSVTDDTWLGNTTQYTSSAIVAAINALSTDSSLDLGDGVPVKARKTTLDHSPAVALKVEPAGEDLGTTPPTPDFQPEEFAAFQHIRKGAFCDQYLSVPQHPYPWARPRSPASYTSPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPSVQLHGYVESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEAVVCSTKVLEIPLLPENNMRATIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSAASGPVLGGKRMVLSGHNFLQDSKVIFVEKAPDGHHIWEMEAKTEGDLCKPNSLVVEIPPFRNQRITSPVQVNFYVCNGKRKRSQYQHFTYLPANVPIIKTEPSDDYEPALTCGPMSQGLSPLPKPCYGQPLALPPDPGACLMPGFPPRPQGSASPELHDLSCAPYGSATAGPGHSPLGLPRPVGGVLASQEAPRPSGVPPGPPQPPPPTLLQPQ
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(982000..982002,1006301..1006659,1016930..1017062,1022666..1022721,1028943..1029083,1030101..1030273,1032187..1032389,1043041..1043200,1052920..1053991,1066860..1066986))
location: region:982000-1066986:-1
so has part: feature:1066860-1066986:-1:exon
so has part: feature:1052920-1053991:-1:exon
so has part: feature:1043041-1043200:-1:exon
so has part: feature:1032187-1032389:-1:exon
so has part: feature:1030101-1030273:-1:exon
so has part: feature:1028943-1029083:-1:exon
so has part: feature:1022666-1022721:-1:exon
so has part: feature:1016930-1017062:-1:exon
so has part: feature:1006301-1006659:-1:exon
so has part: feature:982000-982002:-1:exon

XP_027381597.1
type: Protein
SIO_000068: ncbiprotein

position:982000:-1
position: 982000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066860-1066986:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052920-1053991:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043041-1043200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1032187-1032389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1030101-1030273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1028943-1029083:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022666-1022721:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1016930-1017062:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1006301-1006659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:982000-982002:-1:exon

ATP9B
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: ATP9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1079037..1230440)
location: region:1079037-1230440:-1
so has part: feature:1079037-1230440:-1:exon
subclass of: SO_0000010

113883004
type: Gene
SIO_000068: ncbigene

position:1079037:-1
position: 1079037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230440:-1
position: 1230440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079037-1230440:-1:exon

ATP9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ATP9B
product: ATPase phospholipid transporting 9B (putative)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 32 ESTs, 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 174 samples with support for all annotated introns
transcript id: XM_027526313.1
SIO_010081: ATP9B
subclass of: SO_0000673
so part of: ATP9B
location: complement(join(1079037..1079565,1080967..1081170,1081782..1081839,1082101..1082209,1083588..1083652,1083926..1084081,1084661..1084725,1084873..1085017,1086366..1086455,1088325..1088423,1090791..1090961,1091060..1091143,1092674..1092766,1093339..1093500,1101364..1101609,1105311..1105423,1113614..1113756,1124593..1124753,1152546..1152622,1158824..1158899,1164379..1164459,1174649..1174743,1185554..1185605,1190599..1190657,1201062..1201170,1202015..1202128,1205876..1206026,1216250..1216423,1230183..1230440))
location: region:1079037-1230440:-1
so has part: feature:1230183-1230440:-1:exon
so has part: feature:1216250-1216423:-1:exon
so has part: feature:1205876-1206026:-1:exon
so has part: feature:1202015-1202128:-1:exon
so has part: feature:1201062-1201170:-1:exon
so has part: feature:1190599-1190657:-1:exon
so has part: feature:1185554-1185605:-1:exon
so has part: feature:1174649-1174743:-1:exon
so has part: feature:1164379-1164459:-1:exon
so has part: feature:1158824-1158899:-1:exon
so has part: feature:1152546-1152622:-1:exon
so has part: feature:1124593-1124753:-1:exon
so has part: feature:1113614-1113756:-1:exon
so has part: feature:1105311-1105423:-1:exon
so has part: feature:1101364-1101609:-1:exon
so has part: feature:1093339-1093500:-1:exon
so has part: feature:1092674-1092766:-1:exon
so has part: feature:1091060-1091143:-1:exon
so has part: feature:1090791-1090961:-1:exon
so has part: feature:1088325-1088423:-1:exon
so has part: feature:1086366-1086455:-1:exon
so has part: feature:1084873-1085017:-1:exon
so has part: feature:1084661-1084725:-1:exon
so has part: feature:1083926-1084081:-1:exon
so has part: feature:1083588-1083652:-1:exon
so has part: feature:1082101-1082209:-1:exon
so has part: feature:1081782-1081839:-1:exon
so has part: feature:1080967-1081170:-1:exon
so has part: feature:1079037-1079565:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1230183-1230440:-1:exon

position:1230183:-1
position: 1230183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1216250-1216423:-1:exon

position:1216250:-1
position: 1216250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216423:-1
position: 1216423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1205876-1206026:-1:exon

position:1205876:-1
position: 1205876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206026:-1
position: 1206026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1202015-1202128:-1:exon

position:1202015:-1
position: 1202015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202128:-1
position: 1202128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1201062-1201170:-1:exon

position:1201062:-1
position: 1201062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201170:-1
position: 1201170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1190599-1190657:-1:exon

position:1190599:-1
position: 1190599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190657:-1
position: 1190657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1185554-1185605:-1:exon

position:1185554:-1
position: 1185554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185605:-1
position: 1185605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1174649-1174743:-1:exon

position:1174649:-1
position: 1174649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174743:-1
position: 1174743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1164379-1164459:-1:exon

position:1164379:-1
position: 1164379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164459:-1
position: 1164459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1158824-1158899:-1:exon

position:1158824:-1
position: 1158824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158899:-1
position: 1158899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1152546-1152622:-1:exon

position:1152546:-1
position: 1152546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152622:-1
position: 1152622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1124593-1124753:-1:exon

position:1124593:-1
position: 1124593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124753:-1
position: 1124753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1113614-1113756:-1:exon

position:1113614:-1
position: 1113614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113756:-1
position: 1113756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1105311-1105423:-1:exon

position:1105311:-1
position: 1105311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105423:-1
position: 1105423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1101364-1101609:-1:exon

position:1101364:-1
position: 1101364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101609:-1
position: 1101609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1093339-1093500:-1:exon

position:1093339:-1
position: 1093339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093500:-1
position: 1093500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1092674-1092766:-1:exon

position:1092674:-1
position: 1092674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092766:-1
position: 1092766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1091060-1091143:-1:exon

position:1091060:-1
position: 1091060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091143:-1
position: 1091143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1090791-1090961:-1:exon

position:1090791:-1
position: 1090791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090961:-1
position: 1090961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1088325-1088423:-1:exon

position:1088325:-1
position: 1088325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088423:-1
position: 1088423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1086366-1086455:-1:exon

position:1086366:-1
position: 1086366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086455:-1
position: 1086455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1084873-1085017:-1:exon

position:1084873:-1
position: 1084873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085017:-1
position: 1085017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1084661-1084725:-1:exon

position:1084661:-1
position: 1084661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084725:-1
position: 1084725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1083926-1084081:-1:exon

position:1083926:-1
position: 1083926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084081:-1
position: 1084081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1083588-1083652:-1:exon

position:1083588:-1
position: 1083588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1083652:-1
position: 1083652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1082101-1082209:-1:exon

position:1082101:-1
position: 1082101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082209:-1
position: 1082209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1081782-1081839:-1:exon

position:1081782:-1
position: 1081782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081839:-1
position: 1081839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1080967-1081170:-1:exon

position:1080967:-1
position: 1080967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081170:-1
position: 1081170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1079037-1079565:-1:exon

position:1079565:-1
position: 1079565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ATP9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable phospholipid-transporting ATPase IIB
translation: MADQIPLYPVRSAAAVAAANRKRAAYFSSAGPGPGADRPSRYQLEDESAHLDEMPLMMSEEGFENDESDYHTLPRARITRRKRGLEWFVCGGWKFLCTSCCDWLINICQRKRELKARTVWLGCPEKCEEKHPRNSIKNQKYNIFTFIPGVLYEQFKFFLNLYFLIVSCSQFVPALKIGYLYTYWAPLGFVLAVTIMREAVDEFRRFQRDKEVNSQLYSKLTVRGKVQVKSSDIQVGDLIIVEKNQRIPSDMVFLRTSEKAGSCFIRTDQLDGETDWKLKVAVSCTQRLPALGDLFSINAYVYAQKPQLDIHSFEGTFTREDSDPPVHESLSIENTLWASTVVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNQLTKALFLALVALSVVMVTLQGFAGPWYRSLFRFLLLFSYIIPISLRVNLDMGKAAYGWMIMRDEHIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMVFKRLHLGTVSYGTDTMDEIQNHLVNAYTQTQCQAGGSSAASTPPRKAPSSAPKVRRSVSSRVHEAVKAVALCHNVTPVYEACGAAGETEVAEADQDFSDDNRTYQASSPDEVALVQWTESVGLTLVSRDLTSMQLRTPGGQILTYCILQTFPFTSESKHMGVIVRDESTAEITFYMKGADVAMASIVQYNDWLEEECGNMAREGLRTLVVAKRALTEEQYQDFESRYNQAKLSLHDRTLKVAAVVESLEREMELLCLTGVEDQLQADVRPTLEMLRNAGIKIWMLTGDKLETATCIAKSSHLVSRTQDTHVFRPVTSRGEAHLELNAFRRKHDCALVISGDSLEVCLKYYEHEFVELACQCPAVVCCRCSPTQKAHIVKLLQQHTGRRTCAIGDGGNDVSMIQAADCGIGIEGKEGRQASLAADFSITRFKHVGRLLMVHGRSSYKRSAALGQFVMHRGLIISTMQAVFSSVFYFASVPLYQGFLMVGYATVYTMFPVFSLVLDQDVKPEMAMLYPELYKDLTKGRSLSFKTFLVWVLISIYQGGILMFGALVLFESEFVHVVAISFTALVLTELLMVALTVRTWHWLMVVAQLLSLGCYVASLAFLNEYFDVAFITTVTFVWKVSAITVVSCLPLYVLKYLKRKLSPPSYSKLSS
SIO_010081: ATP9B
subclass of: SO_0000673
so part of: ATP9B
location: complement(join(1079429..1079565,1080967..1081170,1081782..1081839,1082101..1082209,1083588..1083652,1083926..1084081,1084661..1084725,1084873..1085017,1086366..1086455,1088325..1088423,1090791..1090961,1091060..1091143,1092674..1092766,1093339..1093500,1101364..1101609,1105311..1105423,1113614..1113756,1124593..1124753,1152546..1152622,1158824..1158899,1164379..1164459,1174649..1174743,1185554..1185605,1190599..1190657,1201062..1201170,1202015..1202128,1205876..1206026,1216250..1216423,1230183..1230304))
location: region:1079429-1230304:-1
so has part: feature:1230183-1230304:-1:exon
so has part: feature:1216250-1216423:-1:exon
so has part: feature:1205876-1206026:-1:exon
so has part: feature:1202015-1202128:-1:exon
so has part: feature:1201062-1201170:-1:exon
so has part: feature:1190599-1190657:-1:exon
so has part: feature:1185554-1185605:-1:exon
so has part: feature:1174649-1174743:-1:exon
so has part: feature:1164379-1164459:-1:exon
so has part: feature:1158824-1158899:-1:exon
so has part: feature:1152546-1152622:-1:exon
so has part: feature:1124593-1124753:-1:exon
so has part: feature:1113614-1113756:-1:exon
so has part: feature:1105311-1105423:-1:exon
so has part: feature:1101364-1101609:-1:exon
so has part: feature:1093339-1093500:-1:exon
so has part: feature:1092674-1092766:-1:exon
so has part: feature:1091060-1091143:-1:exon
so has part: feature:1090791-1090961:-1:exon
so has part: feature:1088325-1088423:-1:exon
so has part: feature:1086366-1086455:-1:exon
so has part: feature:1084873-1085017:-1:exon
so has part: feature:1084661-1084725:-1:exon
so has part: feature:1083926-1084081:-1:exon
so has part: feature:1083588-1083652:-1:exon
so has part: feature:1082101-1082209:-1:exon
so has part: feature:1081782-1081839:-1:exon
so has part: feature:1080967-1081170:-1:exon
so has part: feature:1079429-1079565:-1:exon

XP_027382114.1
type: Protein
SIO_000068: ncbiprotein

position:1079429:-1
position: 1079429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230304:-1
position: 1230304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230183-1230304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1216250-1216423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205876-1206026:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202015-1202128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1201062-1201170:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1190599-1190657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1185554-1185605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174649-1174743:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1164379-1164459:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1158824-1158899:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1152546-1152622:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1124593-1124753:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1113614-1113756:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1105311-1105423:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1101364-1101609:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1093339-1093500:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1092674-1092766:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1091060-1091143:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1090791-1090961:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1088325-1088423:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1086366-1086455:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1084873-1085017:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1084661-1084725:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1083926-1084081:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1083588-1083652:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1082101-1082209:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1081782-1081839:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1080967-1081170:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1079429-1079565:-1:exon

LOC113883066
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113883066
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1207118..1207224
location: region:1207118-1207224:1
so has part: feature:1207118-1207224:1:exon
subclass of: SO_0000623

113883066
type: Gene
SIO_000068: ncbigene

position:1207118:1
position: 1207118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1207224:1
position: 1207224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1207118-1207224:1:exon

LOC113883066
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: snRNA
gene: LOC113883066
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003508552.1
SIO_010081: LOC113883066
subclass of: SO_0000673
so part of: LOC113883066
location: 1207118..1207224
location: region:1207118-1207224:1
so has part: feature:1207118-1207224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1207118-1207224:1:exon

SALL3
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: SALL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1260475..1279991)
location: region:1260475-1279991:-1
so has part: feature:1260475-1279991:-1:exon
subclass of: SO_0000010

113882836
type: Gene
SIO_000068: ncbigene

position:1260475:-1
position: 1260475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279991:-1
position: 1279991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1260475-1279991:-1:exon

SALL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SALL3
product: spalt like transcription factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_027525972.1
SIO_010081: SALL3
subclass of: SO_0000673
so part of: SALL3
location: complement(join(1260475..1263409,1264472..1264812,1265029..1267932,1279838..1279991))
location: region:1260475-1279991:-1
so has part: feature:1279838-1279991:-1:exon
so has part: feature:1265029-1267932:-1:exon
so has part: feature:1264472-1264812:-1:exon
so has part: feature:1260475-1263409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1279838-1279991:-1:exon

position:1279838:-1
position: 1279838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1265029-1267932:-1:exon

position:1265029:-1
position: 1265029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267932:-1
position: 1267932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1264472-1264812:-1:exon

position:1264472:-1
position: 1264472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1264812:-1
position: 1264812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1260475-1263409:-1:exon

position:1263409:-1
position: 1263409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SALL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SALL3
product: spalt like transcription factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_027525971.1
SIO_010081: SALL3
subclass of: SO_0000673
so part of: SALL3
location: complement(join(1260475..1263409,1264472..1267932,1279838..1279991))
location: region:1260475-1279991:-1
so has part: feature:1279838-1279991:-1:exon
so has part: feature:1264472-1267932:-1:exon
so has part: feature:1260475-1263409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1279838-1279991:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1264472-1267932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260475-1263409:-1:exon

SALL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SALL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sal-like protein 3 isoform X2
translation: MSRRKQAKPQHLKSDEELPPPDGAPEHAAPGEGAEDADSGNESRSGGEDTHVCEKCCAEFFKWADLLAHKEACTKNPLVLIVGEDEPAPPSEDFPEASPASSASERADSEAAEEAAAAAAAAPEGGEAVEARAPEREDEPMEVGAPADKGFQGPGAAHAGQPPPPPGPEPAPGAAYGMPSTNVTLETLLSTKVAVAQFSQTSRAAGAAGPGGGVAAAALPLILEQLVALQQQQVQQLQLIEQIRSQVALMSRPLPPSRPPLHPGPAAHPTLPLSAGTGPAATAQGPAAPPAAYEGPQHLAAPASTASTPHVAGGGPSVPEPGAPACSGAPATSTASTPAAGASGGASRPQNAPTPPALGPGPLLTSTPSLPSPLLPQTSASTVIFPNPLVSIAATANALDPLSALMKHRKGKPPNVSVFEPKASTEDPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEYLDNVPTCSGIPYGMSLPPEKPVTTWLDSKPALPTVPTSVGLQLPPTLPGVGVGSYVDSPSLTPASRSPQRPSPASSECPSLSPGLTSSEAGVPVAAGSPQPAPGGSSLPKTEPVSLPCTNARVGDLPATAGQVSTTSALADSSASPGLCSPVLPAGAEPFKAKFPFGGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHFGVHRAKPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPLPEGFQDAMDAVLPYDDKAADALSACDDDMDDNSLEDDAELKDAAGDPNKPLLAFSGSCPPSPPSVISSIAALENQMKMMDSVMSCPQLSALKSLENGSGESDRLSNDSSSAVGDLESRSAGSPALSESSSSLQALSPGNSNSESLPSKSPGLGAQEEPQETPLKTEKPDSPPPGPENGGALDLTATHPCRPSVKEEAPFSLLFLSRDRGPSQGTPSLGPGSTPTTIKTEVNGHSKAGLLAEGPPLPAAVQVPPGPPTVMSPGLAPMLAPPPRRTPKQHNCQSCGKTFSSASALQIHERTHTGEKPFGCTICGRAFTTKGNLKVHMGTHMWNNAPARRGRRLSVENPMALLGGDALKFSEMFQKDLAARAMNVDPSFWNQYAAAITNGLAMKNNEISVIQNGGLPQLPVSLSGSALPPLGSLAAGLDKARPGSSPPIAGLDKANSDTGGSRPFTRFIEDNKEIGIN
SIO_010081: SALL3
subclass of: SO_0000673
so part of: SALL3
location: complement(join(1262978..1263409,1264472..1264812,1265029..1267932,1279838..1279919))
location: region:1262978-1279919:-1
so has part: feature:1279838-1279919:-1:exon
so has part: feature:1265029-1267932:-1:exon
so has part: feature:1264472-1264812:-1:exon
so has part: feature:1262978-1263409:-1:exon

XP_027381773.1
type: Protein
SIO_000068: ncbiprotein

position:1262978:-1
position: 1262978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279919:-1
position: 1279919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279838-1279919:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1265029-1267932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1264472-1264812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1262978-1263409:-1:exon

SALL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SALL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sal-like protein 3 isoform X1
translation: MSRRKQAKPQHLKSDEELPPPDGAPEHAAPGEGAEDADSGNESRSGGEDTHVCEKCCAEFFKWADLLAHKEACTKNPLVLIVGEDEPAPPSEDFPEASPASSASERADSEAAEEAAAAAAAAPEGGEAVEARAPEREDEPMEVGAPADKGFQGPGAAHAGQPPPPPGPEPAPGAAYGMPSTNVTLETLLSTKVAVAQFSQTSRAAGAAGPGGGVAAAALPLILEQLVALQQQQVQQLQLIEQIRSQVALMSRPLPPSRPPLHPGPAAHPTLPLSAGTGPAATAQGPAAPPAAYEGPQHLAAPASTASTPHVAGGGPSVPEPGAPACSGAPATSTASTPAAGASGGASRPQNAPTPPALGPGPLLTSTPSLPSPLLPQTSASTVIFPNPLVSIAATANALDPLSALMKHRKGKPPNVSVFEPKASTEDPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEYLDNVPTCSGIPYGMSLPPEKPVTTWLDSKPALPTVPTSVGLQLPPTLPGVGVGSYVDSPSLTPASRSPQRPSPASSECPSLSPGLTSSEAGVPVAAGSPQPAPGGSSLPKTEPVSLPCTNARVGDLPATAGQVSTTSALADSSASPGLCSPVLPAGAEPFKAKFPFGGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHFGVHRAKPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPLPEGFQDAMDAVLPYDDKAADALSACDDDMDDNSLEDDAELKDAAGDPNKPLLAFSGSCPPSPPSVISSIAALENQMKMMDSVMSCPQLSALKSLENGSGESDRLSNDSSSAVGDLESRSAGSPALSESSSSLQALSPGNSNSESLPSKSPGLGAQEEPQETPLKTEKPDSPPPGPENGGALDLTATHPCRPSVKEEAPFSLLFLSRDRGKCASTVCRVCAKPFACRSALEIHLRSHTKERPFVCAVCGRGCSTLGNLKQHLLTHRLRELPPQLLDPNFTLGPSQGTPSLGPGSTPTTIKTEVNGHSKAGLLAEGPPLPAAVQVPPGPPTVMSPGLAPMLAPPPRRTPKQHNCQSCGKTFSSASALQIHERTHTGEKPFGCTICGRAFTTKGNLKVHMGTHMWNNAPARRGRRLSVENPMALLGGDALKFSEMFQKDLAARAMNVDPSFWNQYAAAITNGLAMKNNEISVIQNGGLPQLPVSLSGSALPPLGSLAAGLDKARPGSSPPIAGLDKANSDTGGSRPFTRFIEDNKEIGIN
SIO_010081: SALL3
subclass of: SO_0000673
so part of: SALL3
location: complement(join(1262978..1263409,1264472..1267932,1279838..1279919))
location: region:1262978-1279919:-1
so has part: feature:1279838-1279919:-1:exon
so has part: feature:1264472-1267932:-1:exon
so has part: feature:1262978-1263409:-1:exon

XP_027381772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1279838-1279919:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1264472-1267932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1262978-1263409:-1:exon

LOC113883010
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113883010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1980332..1980871)
location: region:1980332-1980871:-1
so has part: feature:1980332-1980871:-1:exon

113883010
type: Gene
SIO_000068: ncbigene

position:1980332:-1
position: 1980332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1980871:-1
position: 1980871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1980332-1980871:-1:exon

LOC113883010
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113883010
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC113883010
subclass of: SO_0000673
so part of: LOC113883010
location: complement(1980332..1980500)
location: region:1980332-1980500:-1
so has part: feature:1980332-1980500:-1:exon

position:1980500:-1
position: 1980500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1980332-1980500:-1:exon

LOC113883010
type: Exon
subclass of: SO_0000147
RO_0002162: 30522
gene: LOC113883010
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC113883010
subclass of: SO_0000673
so part of: LOC113883010
location: complement(1980661..1980871)
location: region:1980661-1980871:-1
so has part: feature:1980661-1980871:-1:exon

position:1980661:-1
position: 1980661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1980661-1980871:-1:exon

TRNAK-UUU
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TRNAK-UUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1982035..1982107
location: region:1982035-1982107:1
so has part: feature:1982035-1982107:1:exon
subclass of: SO_0000663

113883087
type: Gene
SIO_000068: ncbigene

position:1982035:1
position: 1982035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1982107:1
position: 1982107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1982035-1982107:1:exon

TRNAK-UUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30522
gene: TRNAK-UUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon UUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1982068..1982070,aa:Lys,seq:ttt)
SIO_010081: TRNAK-UUU
subclass of: SO_0000673
so part of: TRNAK-UUU
location: 1982035..1982107
location: region:1982035-1982107:1
so has part: feature:1982035-1982107:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1982035-1982107:1:exon

GALR1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: GALR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2345056..2361703)
location: region:2345056-2361703:-1
so has part: feature:2345056-2361703:-1:exon
subclass of: SO_0000010

113882854
type: Gene
SIO_000068: ncbigene

position:2345056:-1
position: 2345056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2361703:-1
position: 2361703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2345056-2361703:-1:exon

GALR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: GALR1
product: galanin receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_027526012.1
SIO_010081: GALR1
subclass of: SO_0000673
so part of: GALR1
location: complement(join(2345056..2348625,2354231..2354296,2358712..2361703))
location: region:2345056-2361703:-1
so has part: feature:2358712-2361703:-1:exon
so has part: feature:2354231-2354296:-1:exon
so has part: feature:2345056-2348625:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2358712-2361703:-1:exon

position:2358712:-1
position: 2358712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2354231-2354296:-1:exon

position:2354231:-1
position: 2354231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2354296:-1
position: 2354296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2345056-2348625:-1:exon

position:2348625:-1
position: 2348625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GALR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: GALR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galanin receptor type 1
translation: MELEVGNFSEGNASGLEPPTPDPRPLFGIGVENFVTLVVFGLIFALGVLGNSLVITVLARSKPGKPRSTTNLFILNLSIADLAYLLFCIPFQATVYALPTWVLGAFICKFIHYFFTVSMLVSIFTLAAMSVDRYVAIVHSRRSSALRVSRNALLGVGFIWALSIAMASPVAYHQRLFHRDVSNQTFCWEQWPNQRHKKAYVVCTFVFGYLLPLLLICFCYAKVLNHLHKKLKNVSKKSEASKKKTAQTVLVVVVVFGVSWLPHHVIHLWAEFGVFPLTPASFFFRITAHCLAYSNSSVNPIIYAFLSENFRKAYKQVFKCHARKESPLNDTKENKSRLDTPPSTNCTHV
SIO_010081: GALR1
subclass of: SO_0000673
so part of: GALR1
location: complement(join(2348308..2348625,2354231..2354296,2358712..2359377))
location: region:2348308-2359377:-1
so has part: feature:2358712-2359377:-1:exon
so has part: feature:2354231-2354296:-1:exon
so has part: feature:2348308-2348625:-1:exon

XP_027381813.1
type: Protein
SIO_000068: ncbiprotein

position:2348308:-1
position: 2348308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2359377:-1
position: 2359377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2358712-2359377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2354231-2354296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2348308-2348625:-1:exon

MBP
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: MBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2424921..2529593
location: region:2424921-2529593:1
so has part: feature:2424921-2529593:1:exon
subclass of: SO_0000010

113882889
type: Gene
SIO_000068: ncbigene

position:2424921:1
position: 2424921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2529593:1
position: 2529593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2424921-2529593:1:exon

MBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: MBP
product: myelin basic protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1148 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_027526076.1
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2424921..2425416,2449259..2449332,2468934..2469021,2496970..2497400,2518398..2518505,2519452..2519487,2519862..2519894,2523579..2523698,2528235..2529593)
location: region:2424921-2529593:1
so has part: feature:2424921-2425416:1:exon
so has part: feature:2449259-2449332:1:exon
so has part: feature:2468934-2469021:1:exon
so has part: feature:2496970-2497400:1:exon
so has part: feature:2518398-2518505:1:exon
so has part: feature:2519452-2519487:1:exon
so has part: feature:2519862-2519894:1:exon
so has part: feature:2523579-2523698:1:exon
so has part: feature:2528235-2529593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2424921-2425416:1:exon

position:2425416:1
position: 2425416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2449259-2449332:1:exon

position:2449259:1
position: 2449259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2449332:1
position: 2449332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2468934-2469021:1:exon

position:2468934:1
position: 2468934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2469021:1
position: 2469021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2496970-2497400:1:exon

position:2496970:1
position: 2496970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2497400:1
position: 2497400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2518398-2518505:1:exon

position:2518398:1
position: 2518398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2518505:1
position: 2518505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2519452-2519487:1:exon

position:2519452:1
position: 2519452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2519487:1
position: 2519487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2519862-2519894:1:exon

position:2519862:1
position: 2519862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2519894:1
position: 2519894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2523579-2523698:1:exon

position:2523579:1
position: 2523579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2523698:1
position: 2523698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2528235-2529593:1:exon

position:2528235:1
position: 2528235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: MBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin basic protein isoform X2
translation: MLSQVPPRARAGWFGGSAASGGSRAAVQPGPESAPHRAAPRGARVRPEPARRSRGEVVGARAAGGRPGSRRQCLPGSQEAREAGEERRARPALGAAARLRRRASKDESAAPETAAPTPKAAPEPRDPARLGPGRWEAARTPRCPQPGETIAARWVTSPRAASEDSRLRMGNHAGKRDFGAEKGNKDSETNRGEHEKKRNTRDLSREISEDSDVFGAADVVPNNGAPSQDTAVTDSKRTADPKNAWPEASPADPGGRPHLVRLFSRDAPGREDNTFKDRPSESDELQTIQEDSAAAPGAVDAMAAQKRPSQRSKYLASASTMDHARHGFLPRHRDTGILDSLGRFFGSDRGAPKRGSGKDGHHAARTTHYGSLPQKAQHGRPQDENPVVHFFKNIVTPRTPPPSQGKGRGLSLSRFSWGAEGQKPGFGYGGRASDYKSAHKGLKGHDAQGTLSKIFKLGGRDSRSGSPMARR
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2424936..2425416,2449259..2449332,2468934..2469021,2496970..2497400,2518398..2518505,2519452..2519487,2519862..2519894,2523579..2523698,2528235..2528279)
location: region:2424936-2528279:1
so has part: feature:2424936-2425416:1:exon
so has part: feature:2449259-2449332:1:exon
so has part: feature:2468934-2469021:1:exon
so has part: feature:2496970-2497400:1:exon
so has part: feature:2518398-2518505:1:exon
so has part: feature:2519452-2519487:1:exon
so has part: feature:2519862-2519894:1:exon
so has part: feature:2523579-2523698:1:exon
so has part: feature:2528235-2528279:1:exon

XP_027381877.1
type: Protein
SIO_000068: ncbiprotein

position:2424936:1
position: 2424936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2528279:1
position: 2528279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2424936-2425416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2449259-2449332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2468934-2469021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2496970-2497400:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2518398-2518505:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2519452-2519487:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2519862-2519894:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2523579-2523698:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2528235-2528279:1:exon

LOC113882890
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2447843..2460188)
location: region:2447843-2460188:-1
so has part: feature:2447843-2460188:-1:exon
subclass of: SO_0000011

113882890
type: Gene
SIO_000068: ncbigene

position:2447843:-1
position: 2447843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2460188:-1
position: 2460188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2447843-2460188:-1:exon

LOC113882890
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882890
product: uncharacterized LOC113882890, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_003508468.1
SIO_010081: LOC113882890
subclass of: SO_0000673
so part of: LOC113882890
location: complement(join(2447843..2448306,2452138..2452276,2458878..2459145,2459557..2460188))
location: region:2447843-2460188:-1
so has part: feature:2459557-2460188:-1:exon
so has part: feature:2458878-2459145:-1:exon
so has part: feature:2452138-2452276:-1:exon
so has part: feature:2447843-2448306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2459557-2460188:-1:exon

position:2459557:-1
position: 2459557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2458878-2459145:-1:exon

position:2458878:-1
position: 2458878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2459145:-1
position: 2459145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2452138-2452276:-1:exon

position:2452138:-1
position: 2452138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2452276:-1
position: 2452276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2447843-2448306:-1:exon

position:2448306:-1
position: 2448306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113882890
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882890
product: uncharacterized LOC113882890, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_003508467.1
SIO_010081: LOC113882890
subclass of: SO_0000673
so part of: LOC113882890
location: complement(join(2447843..2448306,2452138..2452276,2458878..2460180))
location: region:2447843-2460180:-1
so has part: feature:2458878-2460180:-1:exon
so has part: feature:2452138-2452276:-1:exon
so has part: feature:2447843-2448306:-1:exon

position:2460180:-1
position: 2460180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2458878-2460180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2452138-2452276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2447843-2448306:-1:exon

MBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: MBP
product: myelin basic protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 984 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_027526075.1
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2497125..2497400,2503783..2503860,2518398..2518505,2519452..2519487,2523579..2523698,2528235..2529593)
location: region:2497125-2529593:1
so has part: feature:2497125-2497400:1:exon
so has part: feature:2503783-2503860:1:exon
so has part: feature:2518398-2518505:1:exon
so has part: feature:2519452-2519487:1:exon
so has part: feature:2523579-2523698:1:exon
so has part: feature:2528235-2529593:1:exon

position:2497125:1
position: 2497125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2497125-2497400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2503783-2503860:1:exon

position:2503783:1
position: 2503783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2503860:1
position: 2503860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2518398-2518505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2519452-2519487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2523579-2523698:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2528235-2529593:1:exon

MBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: MBP
product: myelin basic protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 982 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_027526077.1
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2497125..2497400,2518398..2518505,2519452..2519487,2523579..2523698,2528235..2529593)
location: region:2497125-2529593:1
so has part: feature:2497125-2497400:1:exon
so has part: feature:2518398-2518505:1:exon
so has part: feature:2519452-2519487:1:exon
so has part: feature:2523579-2523698:1:exon
so has part: feature:2528235-2529593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2497125-2497400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2518398-2518505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2519452-2519487:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2523579-2523698:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2528235-2529593:1:exon

MBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: MBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin basic protein isoform X1
translation: MAAQKRPSQRSKYLASASTMDHARHGFLPRHRDTGILDSLGRFFGSDRGAPKRGSGKVPWLKQSKSPLGPHARSPPGLCNMYQDGHHAARTTHYGSLPQKAQHGRPQDENPVVHFFKNIVTPRTPPPSQGKGAEGQKPGFGYGGRASDYKSAHKGLKGHDAQGTLSKIFKLGGRDSRSGSPMARR
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2497230..2497400,2503783..2503860,2518398..2518505,2519452..2519487,2523579..2523698,2528235..2528279)
location: region:2497230-2528279:1
so has part: feature:2497230-2497400:1:exon
so has part: feature:2503783-2503860:1:exon
so has part: feature:2518398-2518505:1:exon
so has part: feature:2519452-2519487:1:exon
so has part: feature:2523579-2523698:1:exon
so has part: feature:2528235-2528279:1:exon

XP_027381876.1
type: Protein
SIO_000068: ncbiprotein

position:2497230:1
position: 2497230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2497230-2497400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2503783-2503860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2518398-2518505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2519452-2519487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2523579-2523698:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2528235-2528279:1:exon

MBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: MBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin basic protein isoform X3
translation: MAAQKRPSQRSKYLASASTMDHARHGFLPRHRDTGILDSLGRFFGSDRGAPKRGSGKDGHHAARTTHYGSLPQKAQHGRPQDENPVVHFFKNIVTPRTPPPSQGKGAEGQKPGFGYGGRASDYKSAHKGLKGHDAQGTLSKIFKLGGRDSRSGSPMARR
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2497230..2497400,2518398..2518505,2519452..2519487,2523579..2523698,2528235..2528279)
location: region:2497230-2528279:1
so has part: feature:2497230-2497400:1:exon
so has part: feature:2518398-2518505:1:exon
so has part: feature:2519452-2519487:1:exon
so has part: feature:2523579-2523698:1:exon
so has part: feature:2528235-2528279:1:exon

XP_027381878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2497230-2497400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2518398-2518505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2519452-2519487:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2523579-2523698:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2528235-2528279:1:exon

ZNF236
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: ZNF236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2535200..2604222)
location: region:2535200-2604222:-1
so has part: feature:2535200-2604222:-1:exon
subclass of: SO_0000010

113882953
type: Gene
SIO_000068: ncbigene

position:2535200:-1
position: 2535200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2604222:-1
position: 2604222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2535200-2604222:-1:exon

ZNF236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZNF236
product: zinc finger protein 236, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_027526182.1
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2535200..2537674,2538412..2538588,2540619..2540748,2542062..2542259,2544251..2544379,2546091..2546278,2551309..2551464,2554082..2554123,2554508..2554687,2555077..2555317,2555407..2555552,2556516..2556881,2557453..2557556,2558964..2559246,2560860..2561072,2561820..2561971,2564093..2564196,2565589..2565740,2567182..2567435,2568628..2568888,2571603..2571744,2574483..2574686,2575356..2575628,2581427..2581655,2582602..2582805,2584398..2584541,2586658..2586830,2587130..2587254,2587933..2588111,2593097..2593261,2594427..2594569,2604070..2604222))
location: region:2535200-2604222:-1
so has part: feature:2604070-2604222:-1:exon
so has part: feature:2594427-2594569:-1:exon
so has part: feature:2593097-2593261:-1:exon
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SIO_000300: 1
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urn:…
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:2586658-2586830:-1:exon

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SIO_000300: 16
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SIO_000300: 17
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SIO_000300: 18
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SIO_000300: 20
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SIO_000300: 21
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SIO_000300: 22
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SIO_000300: 23
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SIO_000300: 25
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SIO_000300: 26
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SIO_000300: 27
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SIO_000300: 28
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SIO_000300: 30
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SIO_000300: 31
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SIO_000300: 32
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ZNF236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZNF236
product: zinc finger protein 236, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_027526180.1
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2535200..2537674,2538412..2538588,2540619..2540748,2542062..2542259,2544251..2544379,2546091..2546278,2551309..2551464,2554082..2554123,2554508..2554687,2555077..2555317,2555407..2555552,2556516..2556881,2557453..2557556,2558964..2559246,2560860..2561072,2561820..2561971,2564093..2564178,2565589..2565740,2566417..2566518,2567182..2567435,2568628..2568888,2571603..2571744,2574483..2574686,2575356..2575628,2581427..2581655,2582602..2582805,2584398..2584541,2586658..2586830,2587130..2587254,2587933..2588111,2593097..2593261,2594427..2594569,2604070..2604222))
location: region:2535200-2604222:-1
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urn:…
SIO_000300: 1
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SIO_000628: feature:2587933-2588111:-1:exon

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SIO_000300: 5
SIO_000628: feature:2587130-2587254:-1:exon

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SIO_000628: feature:2584398-2584541:-1:exon

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SIO_000300: 8
SIO_000628: feature:2582602-2582805:-1:exon

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SIO_000628: feature:2581427-2581655:-1:exon

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SIO_000628: feature:2575356-2575628:-1:exon

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SIO_000628: feature:2574483-2574686:-1:exon

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SIO_000628: feature:2571603-2571744:-1:exon

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SIO_000628: feature:2568628-2568888:-1:exon

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SIO_000628: feature:2567182-2567435:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2566417-2566518:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:2565589-2565740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2564093-2564178:-1:exon

position:2564178:-1
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urn:…
SIO_000300: 18
SIO_000628: feature:2561820-2561971:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2560860-2561072:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2558964-2559246:-1:exon

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SIO_000300: 21
SIO_000628: feature:2557453-2557556:-1:exon

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SIO_000628: feature:2556516-2556881:-1:exon

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SIO_000628: feature:2555407-2555552:-1:exon

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SIO_000300: 24
SIO_000628: feature:2555077-2555317:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2554508-2554687:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2554082-2554123:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2551309-2551464:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2546091-2546278:-1:exon

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SIO_000300: 29
SIO_000628: feature:2544251-2544379:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2542062-2542259:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2540619-2540748:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2538412-2538588:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2535200-2537674:-1:exon

ZNF236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZNF236
product: zinc finger protein 236, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_027526181.1
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2535200..2537674,2538412..2538588,2540619..2540748,2542062..2542259,2544251..2544379,2546091..2546278,2551309..2551464,2554508..2554687,2555077..2555317,2555407..2555552,2556516..2556881,2557453..2557556,2558964..2559246,2560860..2561072,2561820..2561971,2564093..2564196,2565589..2565740,2566417..2566518,2567182..2567435,2568628..2568888,2571603..2571744,2574483..2574686,2575356..2575628,2581427..2581655,2582602..2582805,2584398..2584541,2586658..2586830,2587130..2587254,2587933..2588111,2593097..2593261,2594427..2594569,2604070..2604222))
location: region:2535200-2604222:-1
so has part: feature:2604070-2604222:-1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 8
SIO_000628: feature:2582602-2582805:-1:exon

urn:…
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urn:…
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SIO_000628: feature:2575356-2575628:-1:exon

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urn:…
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SIO_000628: feature:2566417-2566518:-1:exon

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urn:…
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SIO_000628: feature:2564093-2564196:-1:exon

urn:…
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SIO_000628: feature:2561820-2561971:-1:exon

urn:…
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SIO_000628: feature:2560860-2561072:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2558964-2559246:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2557453-2557556:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2556516-2556881:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2555407-2555552:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2555077-2555317:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2554508-2554687:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2551309-2551464:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2546091-2546278:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2544251-2544379:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2542062-2542259:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2540619-2540748:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2538412-2538588:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2535200-2537674:-1:exon

ZNF236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZNF236
product: zinc finger protein 236, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_027526179.1
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2535200..2537674,2538412..2538588,2540619..2540748,2542062..2542259,2544251..2544379,2546091..2546278,2551309..2551464,2554082..2554123,2554508..2554687,2555077..2555317,2555407..2555552,2556516..2556881,2557453..2557556,2558964..2559246,2560860..2561072,2561820..2561971,2564093..2564196,2565589..2565740,2566417..2566518,2567182..2567435,2568628..2568888,2571603..2571744,2574483..2574686,2575356..2575628,2581427..2581655,2582602..2582805,2584398..2584541,2586658..2586830,2587130..2587254,2587933..2588111,2593097..2593261,2594427..2594569,2604070..2604222))
location: region:2535200-2604222:-1
so has part: feature:2604070-2604222:-1:exon
so has part: feature:2594427-2594569:-1:exon
so has part: feature:2593097-2593261:-1:exon
so has part: feature:2587933-2588111:-1:exon
so has part: feature:2587130-2587254:-1:exon
so has part: feature:2586658-2586830:-1:exon
so has part: feature:2584398-2584541:-1:exon
so has part: feature:2582602-2582805:-1:exon
so has part: feature:2581427-2581655:-1:exon
so has part: feature:2575356-2575628:-1:exon
so has part: feature:2574483-2574686:-1:exon
so has part: feature:2571603-2571744:-1:exon
so has part: feature:2568628-2568888:-1:exon
so has part: feature:2567182-2567435:-1:exon
so has part: feature:2566417-2566518:-1:exon
so has part: feature:2565589-2565740:-1:exon
so has part: feature:2564093-2564196:-1:exon
so has part: feature:2561820-2561971:-1:exon
so has part: feature:2560860-2561072:-1:exon
so has part: feature:2558964-2559246:-1:exon
so has part: feature:2557453-2557556:-1:exon
so has part: feature:2556516-2556881:-1:exon
so has part: feature:2555407-2555552:-1:exon
so has part: feature:2555077-2555317:-1:exon
so has part: feature:2554508-2554687:-1:exon
so has part: feature:2554082-2554123:-1:exon
so has part: feature:2551309-2551464:-1:exon
so has part: feature:2546091-2546278:-1:exon
so has part: feature:2544251-2544379:-1:exon
so has part: feature:2542062-2542259:-1:exon
so has part: feature:2540619-2540748:-1:exon
so has part: feature:2538412-2538588:-1:exon
so has part: feature:2535200-2537674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2604070-2604222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2594427-2594569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2593097-2593261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587933-2588111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2587130-2587254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2586658-2586830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2584398-2584541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2582602-2582805:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2581427-2581655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2575356-2575628:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2574483-2574686:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2571603-2571744:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2568628-2568888:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2567182-2567435:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2566417-2566518:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2565589-2565740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2564093-2564196:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2561820-2561971:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2560860-2561072:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2558964-2559246:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2557453-2557556:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2556516-2556881:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2555407-2555552:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2555077-2555317:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2554508-2554687:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2554082-2554123:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2551309-2551464:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2546091-2546278:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2544251-2544379:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2542062-2542259:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2540619-2540748:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2538412-2538588:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2535200-2537674:-1:exon

ZNF236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZNF236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 236 isoform X4
translation: MPRGRPPKPKESKARGDTDGVLTLNAENTNYDYQVPNFHKCEICLLSFPKESQFQRHMRDHERNDKPHRCDQCPQTFNVEFNLTLHKCTHNGEDPTCPVCNKKFSRVASLKAHVMLHEKEENLICSECGDEFTLQSQLAIHMEEHRQELAGSRTHTCKACRKEFETSSQLKEHMKTHYKIRVAGTRSYNRNIDRSSFTYSCPHCGKTFQKPSQLTRHVRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSHVQRVHSEVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNSAGATETAHVLTATLFQTLPLQQTDTQVPSAPGQQSSQVVTDVIQQLLELSEPGPVEASQPPQAAQQLSITVGINQDILQQALENSGLSSIPVAAHPSDPSHTKAAAAQGQTPDATSVSSEPADPTDTEQEKEQESPEKLDKKEKKIIKKKSPFLPGSIREENGVRWHVCPCCAKEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKSFSTSGSLKVHIRLHTGVRPFACPHCDKKFRTSGHRKTHVASHFKHTELRKMRHQRKPAKVRVGKANVPVPDIPLQEPILITDVGLIQPIPRNQLFQSYFNNNFVNEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSAGVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYELAQQLQQHQQASSMDDSTVDQQGMHVSTPMQVEIESEALQPSTEAVAANPGAMLELGPPHGVSAEEAGLGPQMAGQPLEAEEGFTVTDTYSQQTPFPPVQQLQDSSTLESQALSTSFHQQNLLPVPGTDTINVTTRLIQESPQEEMDLPPPRPPFLEETEEQSRRSYRCDYCSKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAFSCSVCSTAFTTNGSLTRHMATHVSAKPYRCPFCEQGFRTTMHCKKHMKTHQTAASGGSAPGDADGGEMGLEEEEDGSERSTSRKARPEVITFTEEETAQLAKIPPQESATVSEQVLVQSAAEKDRISEMKDRQAELEAEPKHANCCSYCPKSFKKPSDLVRHVRIHTGEKPYRCEECGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCELRFRTSGRRKTHMQFHYKPDPKKARKPAPRAAAEGPQPVSAAPAPSADPGVFIMNSPVLTGQLDQSLLQPGLLGQAVLPASVSAGGDWTVSLTDGSLATLEGIQLQLAANLVGPNVQISGIDASTVNNITLQIDPSVLQQTLQQGNLLAQQLTAEPGLAPQGSSLQTPESTVPASVVIQPIPGLSLQPTVTSANLTIGPLSEQDSVLATSSSGTQDLSQVMTSQGLVSTSGGPHEITLTINNSSLSQVLAQAAGPAAATSSGPPQEITLTISEFFSDHVENNDRKIGQDLIQHSSNGSSELNGSIRLSAPTINNQSTGATLTISNDQLLSQSATLNSSELNATAGSLPPTTPLSPSAVSAQSLVMSSSAVGAEASVTLTLADTQGLLSGGLDTVTLNIASQGQQFPALLTDPSLSGPGGAGSPQVILVSPPAQPSSACEEITYQVTDVSASLAPGGAPEKEARLHACLECGCSFASAGLLLQHSKAAHGRERIHVCPVCRKAFKRATHLKEHMQTHQAGPSLSSQKPRVFKCDTCEKAFAKPSQLERHSRIHTGERPFHCTLCEKAFNQKSALQVHMKKHTGERPYKCDYCVMGFTQKSNMKLHMKRAHSYAGAVPEPVGQQDHGAEALSHALHLDEVVPEPASEWQALANVF
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2537550..2537674,2538412..2538588,2540619..2540748,2542062..2542259,2544251..2544379,2546091..2546278,2551309..2551464,2554082..2554123,2554508..2554687,2555077..2555317,2555407..2555552,2556516..2556881,2557453..2557556,2558964..2559246,2560860..2561072,2561820..2561971,2564093..2564196,2565589..2565740,2567182..2567435,2568628..2568888,2571603..2571744,2574483..2574686,2575356..2575628,2581427..2581655,2582602..2582805,2584398..2584541,2586658..2586830,2587130..2587254,2587933..2588111,2593097..2593261,2594427..2594569,2604070..2604124))
location: region:2537550-2604124:-1
so has part: feature:2604070-2604124:-1:exon
so has part: feature:2594427-2594569:-1:exon
so has part: feature:2593097-2593261:-1:exon
so has part: feature:2587933-2588111:-1:exon
so has part: feature:2587130-2587254:-1:exon
so has part: feature:2586658-2586830:-1:exon
so has part: feature:2584398-2584541:-1:exon
so has part: feature:2582602-2582805:-1:exon
so has part: feature:2581427-2581655:-1:exon
so has part: feature:2575356-2575628:-1:exon
so has part: feature:2574483-2574686:-1:exon
so has part: feature:2571603-2571744:-1:exon
so has part: feature:2568628-2568888:-1:exon
so has part: feature:2567182-2567435:-1:exon
so has part: feature:2565589-2565740:-1:exon
so has part: feature:2564093-2564196:-1:exon
so has part: feature:2561820-2561971:-1:exon
so has part: feature:2560860-2561072:-1:exon
so has part: feature:2558964-2559246:-1:exon
so has part: feature:2557453-2557556:-1:exon
so has part: feature:2556516-2556881:-1:exon
so has part: feature:2555407-2555552:-1:exon
so has part: feature:2555077-2555317:-1:exon
so has part: feature:2554508-2554687:-1:exon
so has part: feature:2554082-2554123:-1:exon
so has part: feature:2551309-2551464:-1:exon
so has part: feature:2546091-2546278:-1:exon
so has part: feature:2544251-2544379:-1:exon
so has part: feature:2542062-2542259:-1:exon
so has part: feature:2540619-2540748:-1:exon
so has part: feature:2538412-2538588:-1:exon
so has part: feature:2537550-2537674:-1:exon

XP_027381983.1
type: Protein
SIO_000068: ncbiprotein

position:2537550:-1
position: 2537550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2604124:-1
position: 2604124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2604070-2604124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2594427-2594569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2593097-2593261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587933-2588111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2587130-2587254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2586658-2586830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2584398-2584541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2582602-2582805:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2581427-2581655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2575356-2575628:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2574483-2574686:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2571603-2571744:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2568628-2568888:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2567182-2567435:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2565589-2565740:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2564093-2564196:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2561820-2561971:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2560860-2561072:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2558964-2559246:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2557453-2557556:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2556516-2556881:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2555407-2555552:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2555077-2555317:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2554508-2554687:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2554082-2554123:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2551309-2551464:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2546091-2546278:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2544251-2544379:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2542062-2542259:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2540619-2540748:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2538412-2538588:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2537550-2537674:-1:exon

ZNF236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZNF236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 236 isoform X2
translation: MPRGRPPKPKESKARGDTDGVLTLNAENTNYDYQVPNFHKCEICLLSFPKESQFQRHMRDHERNDKPHRCDQCPQTFNVEFNLTLHKCTHNGEDPTCPVCNKKFSRVASLKAHVMLHEKEENLICSECGDEFTLQSQLAIHMEEHRQELAGSRTHTCKACRKEFETSSQLKEHMKTHYKIRVAGTRSYNRNIDRSSFTYSCPHCGKTFQKPSQLTRHVRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSHVQRVHSEVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNSAGATETAHVLTATLFQTLPLQQTDTQVPSAPGQQSSQVVTDVIQQLLELSEPGPVEASQPPQAAQQLSITVGINQDILQQALENSGLSSIPVAAHPSDPSHTKAAAAQGQTPDATSVSSEPADPTDTEQEKEQESPEKLDKKEKKIIKKKSPFLPGSIREENGVRWHVCPCCAKEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKSFSTSGSLKVHIRLHTGVRPFACPHCDKKFRTSGHRKTHVASHFKHTELRKMRHQRKPAKVRVGKANVPVPDIPLQEPILITDVGLIQPIPRNQLFQSYFNNNFVNEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSAGVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYELAQQLQQHQQASSMDDSTVDQQGMHVSTPMQVEIESEALQPSTEAVAANPGAMLELGPPHGVSAEEAGLGPQMAGQPLEAEEDRFVAPQQALQGHMDQLHEQAPPQQSFEPAGLSQGFTVTDTYSQQTPFPPVQQLQDSSTLESQALSTSFHQQNLLPVPGTDTINVESPQEEMDLPPPRPPFLEETEEQSRRSYRCDYCSKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAFSCSVCSTAFTTNGSLTRHMATHVSAKPYRCPFCEQGFRTTMHCKKHMKTHQTAASGGSAPGDADGGEMGLEEEEDGSERSTSRKARPEVITFTEEETAQLAKIPPQESATVSEQVLVQSAAEKDRISEMKDRQAELEAEPKHANCCSYCPKSFKKPSDLVRHVRIHTGEKPYRCEECGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCELRFRTSGRRKTHMQFHYKPDPKKARKPAPRAAAEGPQPVSAAPAPSADPGVFIMNSPVLTGQLDQSLLQPGLLGQAVLPASVSAGGDWTVSLTDGSLATLEGIQLQLAANLVGPNVQISGIDASTVNNITLQIDPSVLQQTLQQGNLLAQQLTAEPGLAPQGSSLQTPESTVPASVVIQPIPGLSLQPTVTSANLTIGPLSEQDSVLATSSSGTQDLSQVMTSQGLVSTSGGPHEITLTINNSSLSQVLAQAAGPAAATSSGPPQEITLTISEFFSDHVENNDRKIGQDLIQHSSNGSSELNGSIRLSAPTINNQSTGATLTISNDQLLSQSATLNSSELNATAGSLPPTTPLSPSAVSAQSLVMSSSAVGAEASVTLTLADTQGLLSGGLDTVTLNIASQGQQFPALLTDPSLSGPGGAGSPQVILVSPPAQPSSACEEITYQVTDVSASLAPGGAPEKEARLHACLECGCSFASAGLLLQHSKAAHGRERIHVCPVCRKAFKRATHLKEHMQTHQAGPSLSSQKPRVFKCDTCEKAFAKPSQLERHSRIHTGERPFHCTLCEKAFNQKSALQVHMKKHTGERPYKCDYCVMGFTQKSNMKLHMKRAHSYAGAVPEPVGQQDHGAEALSHALHLDEVVPEPASEWQALANVF
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2537550..2537674,2538412..2538588,2540619..2540748,2542062..2542259,2544251..2544379,2546091..2546278,2551309..2551464,2554082..2554123,2554508..2554687,2555077..2555317,2555407..2555552,2556516..2556881,2557453..2557556,2558964..2559246,2560860..2561072,2561820..2561971,2564093..2564178,2565589..2565740,2566417..2566518,2567182..2567435,2568628..2568888,2571603..2571744,2574483..2574686,2575356..2575628,2581427..2581655,2582602..2582805,2584398..2584541,2586658..2586830,2587130..2587254,2587933..2588111,2593097..2593261,2594427..2594569,2604070..2604124))
location: region:2537550-2604124:-1
so has part: feature:2604070-2604124:-1:exon
so has part: feature:2594427-2594569:-1:exon
so has part: feature:2593097-2593261:-1:exon
so has part: feature:2587933-2588111:-1:exon
so has part: feature:2587130-2587254:-1:exon
so has part: feature:2586658-2586830:-1:exon
so has part: feature:2584398-2584541:-1:exon
so has part: feature:2582602-2582805:-1:exon
so has part: feature:2581427-2581655:-1:exon
so has part: feature:2575356-2575628:-1:exon
so has part: feature:2574483-2574686:-1:exon
so has part: feature:2571603-2571744:-1:exon
so has part: feature:2568628-2568888:-1:exon
so has part: feature:2567182-2567435:-1:exon
so has part: feature:2566417-2566518:-1:exon
so has part: feature:2565589-2565740:-1:exon
so has part: feature:2564093-2564178:-1:exon
so has part: feature:2561820-2561971:-1:exon
so has part: feature:2560860-2561072:-1:exon
so has part: feature:2558964-2559246:-1:exon
so has part: feature:2557453-2557556:-1:exon
so has part: feature:2556516-2556881:-1:exon
so has part: feature:2555407-2555552:-1:exon
so has part: feature:2555077-2555317:-1:exon
so has part: feature:2554508-2554687:-1:exon
so has part: feature:2554082-2554123:-1:exon
so has part: feature:2551309-2551464:-1:exon
so has part: feature:2546091-2546278:-1:exon
so has part: feature:2544251-2544379:-1:exon
so has part: feature:2542062-2542259:-1:exon
so has part: feature:2540619-2540748:-1:exon
so has part: feature:2538412-2538588:-1:exon
so has part: feature:2537550-2537674:-1:exon

XP_027381981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2604070-2604124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2594427-2594569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2593097-2593261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587933-2588111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2587130-2587254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2586658-2586830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2584398-2584541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2582602-2582805:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2581427-2581655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2575356-2575628:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2574483-2574686:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2571603-2571744:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2568628-2568888:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2567182-2567435:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2566417-2566518:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2565589-2565740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2564093-2564178:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2561820-2561971:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2560860-2561072:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2558964-2559246:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2557453-2557556:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2556516-2556881:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2555407-2555552:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2555077-2555317:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2554508-2554687:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2554082-2554123:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2551309-2551464:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2546091-2546278:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2544251-2544379:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2542062-2542259:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2540619-2540748:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2538412-2538588:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2537550-2537674:-1:exon

ZNF236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZNF236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 236 isoform X3
translation: MPRGRPPKPKESKARGDTDGVLTLNAENTNYDYQVPNFHKCEICLLSFPKESQFQRHMRDHERNDKPHRCDQCPQTFNVEFNLTLHKCTHNGEDPTCPVCNKKFSRVASLKAHVMLHEKEENLICSECGDEFTLQSQLAIHMEEHRQELAGSRTHTCKACRKEFETSSQLKEHMKTHYKIRVAGTRSYNRNIDRSSFTYSCPHCGKTFQKPSQLTRHVRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSHVQRVHSEVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNSAGATETAHVLTATLFQTLPLQQTDTQVPSAPGQQSSQVVTDVIQQLLELSEPGPVEASQPPQAAQQLSITVGINQDILQQALENSGLSSIPVAAHPSDPSHTKAAAAQGQTPDATSVSSEPADPTDTEQEKEQESPEKLDKKEKKIIKKKSPFLPGSIREENGVRWHVCPCCAKEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKSFSTSGSLKVHIRLHTGVRPFACPHCDKKFRTSGHRKTHVASHFKHTELRKMRHQRKPAKVRVGKANVPVPDIPLQEPILITDVGLIQPIPRNQLFQSYFNNNFVNEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSAGVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYELAQQLQQHQQASSMDDSTVDQQGMHVSTPMQVEIESEALQPSTEAVAANPGAMLELGPPHGVSAEEAGLGPQMAGQPLEAEEDRFVAPQQALQGHMDQLHEQAPPQQSFEPAGLSQGFTVTDTYSQQTPFPPVQQLQDSSTLESQALSTSFHQQNLLPVPGTDTINVTTRLIQESPQEEMDLPPPRPPFLEETEEQSRRSYRCDYCSKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAFSCSVCSTAFTTNGSLTRHMATHVSAKPYRCPFCEQGFRTTMHCKKHMKTHQTAASGGSAPGDADGGEMGLEEEEDGSERSTSRKARPEVITFTEEETAQLAKIPPQESATVSEQVLVQSAAEKDRISEMKDRQAELEAEPKHANCCSYCPKSFKKPSDLVRHVRIHTGEKPYRCEECGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCELRFRTSGRRKTHMQFHYKPDPKKARKPAPRAAAEGPQPVSAAPAPSADPGVFIMNSPVLTGQLDQSLLQPGLLGQAVLPASVSAGGDWTVSLTDGSLATLEGIQLQLAANLVGPNVQISGIDASTVNNITLQIDPSVLQQTLQQGNLLAQQLTAEPGLAPQGSSLQTPESTVPASVVIQPIPGLSLQPTVTSANLTIGPLSEQDSVLATSSSGTQDLSQVMTSQGLVSTSGGPHEITLTINNSSLSQVLAQAAGPAAATSSGPPQEITLTISGQDLIQHSSNGSSELNGSIRLSAPTINNQSTGATLTISNDQLLSQSATLNSSELNATAGSLPPTTPLSPSAVSAQSLVMSSSAVGAEASVTLTLADTQGLLSGGLDTVTLNIASQGQQFPALLTDPSLSGPGGAGSPQVILVSPPAQPSSACEEITYQVTDVSASLAPGGAPEKEARLHACLECGCSFASAGLLLQHSKAAHGRERIHVCPVCRKAFKRATHLKEHMQTHQAGPSLSSQKPRVFKCDTCEKAFAKPSQLERHSRIHTGERPFHCTLCEKAFNQKSALQVHMKKHTGERPYKCDYCVMGFTQKSNMKLHMKRAHSYAGAVPEPVGQQDHGAEALSHALHLDEVVPEPASEWQALANVF
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2537550..2537674,2538412..2538588,2540619..2540748,2542062..2542259,2544251..2544379,2546091..2546278,2551309..2551464,2554508..2554687,2555077..2555317,2555407..2555552,2556516..2556881,2557453..2557556,2558964..2559246,2560860..2561072,2561820..2561971,2564093..2564196,2565589..2565740,2566417..2566518,2567182..2567435,2568628..2568888,2571603..2571744,2574483..2574686,2575356..2575628,2581427..2581655,2582602..2582805,2584398..2584541,2586658..2586830,2587130..2587254,2587933..2588111,2593097..2593261,2594427..2594569,2604070..2604124))
location: region:2537550-2604124:-1
so has part: feature:2604070-2604124:-1:exon
so has part: feature:2594427-2594569:-1:exon
so has part: feature:2593097-2593261:-1:exon
so has part: feature:2587933-2588111:-1:exon
so has part: feature:2587130-2587254:-1:exon
so has part: feature:2586658-2586830:-1:exon
so has part: feature:2584398-2584541:-1:exon
so has part: feature:2582602-2582805:-1:exon
so has part: feature:2581427-2581655:-1:exon
so has part: feature:2575356-2575628:-1:exon
so has part: feature:2574483-2574686:-1:exon
so has part: feature:2571603-2571744:-1:exon
so has part: feature:2568628-2568888:-1:exon
so has part: feature:2567182-2567435:-1:exon
so has part: feature:2566417-2566518:-1:exon
so has part: feature:2565589-2565740:-1:exon
so has part: feature:2564093-2564196:-1:exon
so has part: feature:2561820-2561971:-1:exon
so has part: feature:2560860-2561072:-1:exon
so has part: feature:2558964-2559246:-1:exon
so has part: feature:2557453-2557556:-1:exon
so has part: feature:2556516-2556881:-1:exon
so has part: feature:2555407-2555552:-1:exon
so has part: feature:2555077-2555317:-1:exon
so has part: feature:2554508-2554687:-1:exon
so has part: feature:2551309-2551464:-1:exon
so has part: feature:2546091-2546278:-1:exon
so has part: feature:2544251-2544379:-1:exon
so has part: feature:2542062-2542259:-1:exon
so has part: feature:2540619-2540748:-1:exon
so has part: feature:2538412-2538588:-1:exon
so has part: feature:2537550-2537674:-1:exon

XP_027381982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2604070-2604124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2594427-2594569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2593097-2593261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587933-2588111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2587130-2587254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2586658-2586830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2584398-2584541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2582602-2582805:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2581427-2581655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2575356-2575628:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2574483-2574686:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2571603-2571744:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2568628-2568888:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2567182-2567435:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2566417-2566518:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2565589-2565740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2564093-2564196:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2561820-2561971:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2560860-2561072:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2558964-2559246:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2557453-2557556:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2556516-2556881:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2555407-2555552:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2555077-2555317:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2554508-2554687:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2551309-2551464:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2546091-2546278:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2544251-2544379:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2542062-2542259:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2540619-2540748:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2538412-2538588:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2537550-2537674:-1:exon

ZNF236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZNF236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 236 isoform X1
translation: MPRGRPPKPKESKARGDTDGVLTLNAENTNYDYQVPNFHKCEICLLSFPKESQFQRHMRDHERNDKPHRCDQCPQTFNVEFNLTLHKCTHNGEDPTCPVCNKKFSRVASLKAHVMLHEKEENLICSECGDEFTLQSQLAIHMEEHRQELAGSRTHTCKACRKEFETSSQLKEHMKTHYKIRVAGTRSYNRNIDRSSFTYSCPHCGKTFQKPSQLTRHVRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSHVQRVHSEVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNSAGATETAHVLTATLFQTLPLQQTDTQVPSAPGQQSSQVVTDVIQQLLELSEPGPVEASQPPQAAQQLSITVGINQDILQQALENSGLSSIPVAAHPSDPSHTKAAAAQGQTPDATSVSSEPADPTDTEQEKEQESPEKLDKKEKKIIKKKSPFLPGSIREENGVRWHVCPCCAKEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKSFSTSGSLKVHIRLHTGVRPFACPHCDKKFRTSGHRKTHVASHFKHTELRKMRHQRKPAKVRVGKANVPVPDIPLQEPILITDVGLIQPIPRNQLFQSYFNNNFVNEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSAGVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYELAQQLQQHQQASSMDDSTVDQQGMHVSTPMQVEIESEALQPSTEAVAANPGAMLELGPPHGVSAEEAGLGPQMAGQPLEAEEDRFVAPQQALQGHMDQLHEQAPPQQSFEPAGLSQGFTVTDTYSQQTPFPPVQQLQDSSTLESQALSTSFHQQNLLPVPGTDTINVTTRLIQESPQEEMDLPPPRPPFLEETEEQSRRSYRCDYCSKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAFSCSVCSTAFTTNGSLTRHMATHVSAKPYRCPFCEQGFRTTMHCKKHMKTHQTAASGGSAPGDADGGEMGLEEEEDGSERSTSRKARPEVITFTEEETAQLAKIPPQESATVSEQVLVQSAAEKDRISEMKDRQAELEAEPKHANCCSYCPKSFKKPSDLVRHVRIHTGEKPYRCEECGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCELRFRTSGRRKTHMQFHYKPDPKKARKPAPRAAAEGPQPVSAAPAPSADPGVFIMNSPVLTGQLDQSLLQPGLLGQAVLPASVSAGGDWTVSLTDGSLATLEGIQLQLAANLVGPNVQISGIDASTVNNITLQIDPSVLQQTLQQGNLLAQQLTAEPGLAPQGSSLQTPESTVPASVVIQPIPGLSLQPTVTSANLTIGPLSEQDSVLATSSSGTQDLSQVMTSQGLVSTSGGPHEITLTINNSSLSQVLAQAAGPAAATSSGPPQEITLTISEFFSDHVENNDRKIGQDLIQHSSNGSSELNGSIRLSAPTINNQSTGATLTISNDQLLSQSATLNSSELNATAGSLPPTTPLSPSAVSAQSLVMSSSAVGAEASVTLTLADTQGLLSGGLDTVTLNIASQGQQFPALLTDPSLSGPGGAGSPQVILVSPPAQPSSACEEITYQVTDVSASLAPGGAPEKEARLHACLECGCSFASAGLLLQHSKAAHGRERIHVCPVCRKAFKRATHLKEHMQTHQAGPSLSSQKPRVFKCDTCEKAFAKPSQLERHSRIHTGERPFHCTLCEKAFNQKSALQVHMKKHTGERPYKCDYCVMGFTQKSNMKLHMKRAHSYAGAVPEPVGQQDHGAEALSHALHLDEVVPEPASEWQALANVF
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2537550..2537674,2538412..2538588,2540619..2540748,2542062..2542259,2544251..2544379,2546091..2546278,2551309..2551464,2554082..2554123,2554508..2554687,2555077..2555317,2555407..2555552,2556516..2556881,2557453..2557556,2558964..2559246,2560860..2561072,2561820..2561971,2564093..2564196,2565589..2565740,2566417..2566518,2567182..2567435,2568628..2568888,2571603..2571744,2574483..2574686,2575356..2575628,2581427..2581655,2582602..2582805,2584398..2584541,2586658..2586830,2587130..2587254,2587933..2588111,2593097..2593261,2594427..2594569,2604070..2604124))
location: region:2537550-2604124:-1
so has part: feature:2604070-2604124:-1:exon
so has part: feature:2594427-2594569:-1:exon
so has part: feature:2593097-2593261:-1:exon
so has part: feature:2587933-2588111:-1:exon
so has part: feature:2587130-2587254:-1:exon
so has part: feature:2586658-2586830:-1:exon
so has part: feature:2584398-2584541:-1:exon
so has part: feature:2582602-2582805:-1:exon
so has part: feature:2581427-2581655:-1:exon
so has part: feature:2575356-2575628:-1:exon
so has part: feature:2574483-2574686:-1:exon
so has part: feature:2571603-2571744:-1:exon
so has part: feature:2568628-2568888:-1:exon
so has part: feature:2567182-2567435:-1:exon
so has part: feature:2566417-2566518:-1:exon
so has part: feature:2565589-2565740:-1:exon
so has part: feature:2564093-2564196:-1:exon
so has part: feature:2561820-2561971:-1:exon
so has part: feature:2560860-2561072:-1:exon
so has part: feature:2558964-2559246:-1:exon
so has part: feature:2557453-2557556:-1:exon
so has part: feature:2556516-2556881:-1:exon
so has part: feature:2555407-2555552:-1:exon
so has part: feature:2555077-2555317:-1:exon
so has part: feature:2554508-2554687:-1:exon
so has part: feature:2554082-2554123:-1:exon
so has part: feature:2551309-2551464:-1:exon
so has part: feature:2546091-2546278:-1:exon
so has part: feature:2544251-2544379:-1:exon
so has part: feature:2542062-2542259:-1:exon
so has part: feature:2540619-2540748:-1:exon
so has part: feature:2538412-2538588:-1:exon
so has part: feature:2537550-2537674:-1:exon

XP_027381980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2604070-2604124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2594427-2594569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2593097-2593261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587933-2588111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2587130-2587254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2586658-2586830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2584398-2584541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2582602-2582805:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2581427-2581655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2575356-2575628:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2574483-2574686:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2571603-2571744:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2568628-2568888:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2567182-2567435:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2566417-2566518:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2565589-2565740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2564093-2564196:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2561820-2561971:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2560860-2561072:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2558964-2559246:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2557453-2557556:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2556516-2556881:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2555407-2555552:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2555077-2555317:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2554508-2554687:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2554082-2554123:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2551309-2551464:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2546091-2546278:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2544251-2544379:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2542062-2542259:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2540619-2540748:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2538412-2538588:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2537550-2537674:-1:exon

ZNF236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZNF236
product: zinc finger protein 236, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_027526183.1
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2546189..2546278,2547174..2547240,2551309..2551464,2554082..2554123,2554508..2554687,2555077..2555317,2555407..2555552,2556516..2556881,2557453..2557556,2558964..2559246,2560860..2561072,2561820..2561971,2564093..2564196,2565589..2565740,2566417..2566518,2567182..2567435,2568628..2568888,2571603..2571744,2574483..2574686,2575356..2575628,2581427..2581655,2582602..2582805,2584398..2584541,2586658..2586830,2587130..2587254,2587933..2588111,2593097..2593261,2594427..2594569,2604070..2604222))
location: region:2546189-2604222:-1
so has part: feature:2604070-2604222:-1:exon
so has part: feature:2594427-2594569:-1:exon
so has part: feature:2593097-2593261:-1:exon
so has part: feature:2587933-2588111:-1:exon
so has part: feature:2587130-2587254:-1:exon
so has part: feature:2586658-2586830:-1:exon
so has part: feature:2584398-2584541:-1:exon
so has part: feature:2582602-2582805:-1:exon
so has part: feature:2581427-2581655:-1:exon
so has part: feature:2575356-2575628:-1:exon
so has part: feature:2574483-2574686:-1:exon
so has part: feature:2571603-2571744:-1:exon
so has part: feature:2568628-2568888:-1:exon
so has part: feature:2567182-2567435:-1:exon
so has part: feature:2566417-2566518:-1:exon
so has part: feature:2565589-2565740:-1:exon
so has part: feature:2564093-2564196:-1:exon
so has part: feature:2561820-2561971:-1:exon
so has part: feature:2560860-2561072:-1:exon
so has part: feature:2558964-2559246:-1:exon
so has part: feature:2557453-2557556:-1:exon
so has part: feature:2556516-2556881:-1:exon
so has part: feature:2555407-2555552:-1:exon
so has part: feature:2555077-2555317:-1:exon
so has part: feature:2554508-2554687:-1:exon
so has part: feature:2554082-2554123:-1:exon
so has part: feature:2551309-2551464:-1:exon
so has part: feature:2547174-2547240:-1:exon
so has part: feature:2546189-2546278:-1:exon

position:2546189:-1
position: 2546189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2604070-2604222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2594427-2594569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2593097-2593261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587933-2588111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2587130-2587254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2586658-2586830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2584398-2584541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2582602-2582805:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2581427-2581655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2575356-2575628:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2574483-2574686:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2571603-2571744:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2568628-2568888:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2567182-2567435:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2566417-2566518:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2565589-2565740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2564093-2564196:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2561820-2561971:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2560860-2561072:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2558964-2559246:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2557453-2557556:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2556516-2556881:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2555407-2555552:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2555077-2555317:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2554508-2554687:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2554082-2554123:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2551309-2551464:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2547174-2547240:-1:exon

position:2547174:-1
position: 2547174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2547240:-1
position: 2547240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2546189-2546278:-1:exon

ZNF236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZNF236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 236 isoform X5
translation: MPRGRPPKPKESKARGDTDGVLTLNAENTNYDYQVPNFHKCEICLLSFPKESQFQRHMRDHERNDKPHRCDQCPQTFNVEFNLTLHKCTHNGEDPTCPVCNKKFSRVASLKAHVMLHEKEENLICSECGDEFTLQSQLAIHMEEHRQELAGSRTHTCKACRKEFETSSQLKEHMKTHYKIRVAGTRSYNRNIDRSSFTYSCPHCGKTFQKPSQLTRHVRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSHVQRVHSEVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNSAGATETAHVLTATLFQTLPLQQTDTQVPSAPGQQSSQVVTDVIQQLLELSEPGPVEASQPPQAAQQLSITVGINQDILQQALENSGLSSIPVAAHPSDPSHTKAAAAQGQTPDATSVSSEPADPTDTEQEKEQESPEKLDKKEKKIIKKKSPFLPGSIREENGVRWHVCPCCAKEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKSFSTSGSLKVHIRLHTGVRPFACPHCDKKFRTSGHRKTHVASHFKHTELRKMRHQRKPAKVRVGKANVPVPDIPLQEPILITDVGLIQPIPRNQLFQSYFNNNFVNEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSAGVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYELAQQLQQHQQASSMDDSTVDQQGMHVSTPMQVEIESEALQPSTEAVAANPGAMLELGPPHGVSAEEAGLGPQMAGQPLEAEEDRFVAPQQALQGHMDQLHEQAPPQQSFEPAGLSQGFTVTDTYSQQTPFPPVQQLQDSSTLESQALSTSFHQQNLLPVPGTDTINVTTRLIQESPQEEMDLPPPRPPFLEETEEQSRRSYRCDYCSKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAFSCSVCSTAFTTNGSLTRHMATHVSAKPYRCPFCEQGFRTTMHCKKHMKTHQTAASGGSAPGDADGGEMGLEEEEDGSERSTSRKARPEVITFTEEETAQLAKIPPQESATVSEQVLVQSAAEKDRISEMKDRQAELEAEPKHANCCSYCPKSFKKPSDLVRHVRIHTGEKPYRCEECGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCELRFRTSGRRKTHMQFHYKPDPKKARKPAPRAAAEGPQPVSAAPAPSADPGVFIMNSPVLTGQLDQSLLQPGLLGQAVLPASVSAGGDWTVSLTDGSLATLEGIQLQLAANLVGPNVQISGIDASTVNNITLQIDPSVLQQTLQQGNLLAQQLTAEPGLAPQGSSLQTPESTVPASVVIQPIPGLSLQPTVTSANLTIGPLSEQDSVLATSSSGTQDLSQVMTSQGLVSTSGGPHEITLTINNSSLSQVLAQAAGPAAATSSGPPQEITLTISEFFSDHVENNDRKIGQDLIQHSSNGSSELNGSIRLSAPTINNQSTGATLTISNDQLLSQSATLNSSGSRSARHSVRVRECGSVEDAGHKT
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2546272..2546278,2547174..2547240,2551309..2551464,2554082..2554123,2554508..2554687,2555077..2555317,2555407..2555552,2556516..2556881,2557453..2557556,2558964..2559246,2560860..2561072,2561820..2561971,2564093..2564196,2565589..2565740,2566417..2566518,2567182..2567435,2568628..2568888,2571603..2571744,2574483..2574686,2575356..2575628,2581427..2581655,2582602..2582805,2584398..2584541,2586658..2586830,2587130..2587254,2587933..2588111,2593097..2593261,2594427..2594569,2604070..2604124))
location: region:2546272-2604124:-1
so has part: feature:2604070-2604124:-1:exon
so has part: feature:2594427-2594569:-1:exon
so has part: feature:2593097-2593261:-1:exon
so has part: feature:2587933-2588111:-1:exon
so has part: feature:2587130-2587254:-1:exon
so has part: feature:2586658-2586830:-1:exon
so has part: feature:2584398-2584541:-1:exon
so has part: feature:2582602-2582805:-1:exon
so has part: feature:2581427-2581655:-1:exon
so has part: feature:2575356-2575628:-1:exon
so has part: feature:2574483-2574686:-1:exon
so has part: feature:2571603-2571744:-1:exon
so has part: feature:2568628-2568888:-1:exon
so has part: feature:2567182-2567435:-1:exon
so has part: feature:2566417-2566518:-1:exon
so has part: feature:2565589-2565740:-1:exon
so has part: feature:2564093-2564196:-1:exon
so has part: feature:2561820-2561971:-1:exon
so has part: feature:2560860-2561072:-1:exon
so has part: feature:2558964-2559246:-1:exon
so has part: feature:2557453-2557556:-1:exon
so has part: feature:2556516-2556881:-1:exon
so has part: feature:2555407-2555552:-1:exon
so has part: feature:2555077-2555317:-1:exon
so has part: feature:2554508-2554687:-1:exon
so has part: feature:2554082-2554123:-1:exon
so has part: feature:2551309-2551464:-1:exon
so has part: feature:2547174-2547240:-1:exon
so has part: feature:2546272-2546278:-1:exon

XP_027381984.1
type: Protein
SIO_000068: ncbiprotein

position:2546272:-1
position: 2546272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2604070-2604124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2594427-2594569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2593097-2593261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2587933-2588111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2587130-2587254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2586658-2586830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2584398-2584541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2582602-2582805:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2581427-2581655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2575356-2575628:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2574483-2574686:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2571603-2571744:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2568628-2568888:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2567182-2567435:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2566417-2566518:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2565589-2565740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2564093-2564196:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2561820-2561971:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2560860-2561072:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2558964-2559246:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2557453-2557556:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2556516-2556881:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2555407-2555552:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2555077-2555317:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2554508-2554687:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2554082-2554123:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2551309-2551464:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2547174-2547240:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2546272-2546278:-1:exon

LOC113882954
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2604266..2612217
location: region:2604266-2612217:1
so has part: feature:2604266-2612217:1:exon
subclass of: SO_0000011

113882954
type: Gene
SIO_000068: ncbigene

position:2604266:1
position: 2604266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2612217:1
position: 2612217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2604266-2612217:1:exon

LOC113882954
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882954
product: uncharacterized LOC113882954, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XR_003508500.1
SIO_010081: LOC113882954
subclass of: SO_0000673
so part of: LOC113882954
location: join(2604266..2604378,2604719..2605110,2607574..2607680,2608182..2608235,2609233..2611143)
location: region:2604266-2611143:1
so has part: feature:2604266-2604378:1:exon
so has part: feature:2604719-2605110:1:exon
so has part: feature:2607574-2607680:1:exon
so has part: feature:2608182-2608235:1:exon
so has part: feature:2609233-2611143:1:exon

position:2611143:1
position: 2611143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2604266-2604378:1:exon

position:2604378:1
position: 2604378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2604719-2605110:1:exon

position:2604719:1
position: 2604719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2605110:1
position: 2605110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2607574-2607680:1:exon

position:2607574:1
position: 2607574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2607680:1
position: 2607680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2608182-2608235:1:exon

position:2608182:1
position: 2608182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2608235:1
position: 2608235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2609233-2611143:1:exon

position:2609233:1
position: 2609233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113882954
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882954
product: uncharacterized LOC113882954, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_003508499.1
SIO_010081: LOC113882954
subclass of: SO_0000673
so part of: LOC113882954
location: join(2604411..2604583,2604719..2605110,2607574..2607680,2608182..2608235,2609233..2611456,2611699..2612217)
location: region:2604411-2612217:1
so has part: feature:2604411-2604583:1:exon
so has part: feature:2604719-2605110:1:exon
so has part: feature:2607574-2607680:1:exon
so has part: feature:2608182-2608235:1:exon
so has part: feature:2609233-2611456:1:exon
so has part: feature:2611699-2612217:1:exon

position:2604411:1
position: 2604411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2604411-2604583:1:exon

position:2604583:1
position: 2604583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2604719-2605110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2607574-2607680:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2608182-2608235:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2609233-2611456:1:exon

position:2611456:1
position: 2611456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2611699-2612217:1:exon

position:2611699:1
position: 2611699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113882954
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882954
product: uncharacterized LOC113882954, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XR_003508503.1
SIO_010081: LOC113882954
subclass of: SO_0000673
so part of: LOC113882954
location: join(2604420..2604583,2604719..2604813,2604948..2605110,2607574..2607680,2608182..2608235,2609233..2611143)
location: region:2604420-2611143:1
so has part: feature:2604420-2604583:1:exon
so has part: feature:2604719-2604813:1:exon
so has part: feature:2604948-2605110:1:exon
so has part: feature:2607574-2607680:1:exon
so has part: feature:2608182-2608235:1:exon
so has part: feature:2609233-2611143:1:exon

position:2604420:1
position: 2604420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2604420-2604583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2604719-2604813:1:exon

position:2604813:1
position: 2604813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2604948-2605110:1:exon

position:2604948:1
position: 2604948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2607574-2607680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2608182-2608235:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2609233-2611143:1:exon

LOC113882954
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882954
product: uncharacterized LOC113882954, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 153 samples with support for all annotated introns
transcript id: XR_003508501.1
SIO_010081: LOC113882954
subclass of: SO_0000673
so part of: LOC113882954
location: join(2604421..2604583,2604719..2604837,2604948..2605110,2607574..2607680,2608182..2608235,2609233..2611143)
location: region:2604421-2611143:1
so has part: feature:2604421-2604583:1:exon
so has part: feature:2604719-2604837:1:exon
so has part: feature:2604948-2605110:1:exon
so has part: feature:2607574-2607680:1:exon
so has part: feature:2608182-2608235:1:exon
so has part: feature:2609233-2611143:1:exon

position:2604421:1
position: 2604421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2604421-2604583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2604719-2604837:1:exon

position:2604837:1
position: 2604837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2604948-2605110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2607574-2607680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2608182-2608235:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2609233-2611143:1:exon

LOC113882954
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882954
product: uncharacterized LOC113882954, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 150 samples with support for all annotated introns
transcript id: XR_003508502.1
SIO_010081: LOC113882954
subclass of: SO_0000673
so part of: LOC113882954
location: join(2604422..2604583,2604719..2604804,2604948..2605110,2607574..2607680,2608182..2608235,2609233..2611143)
location: region:2604422-2611143:1
so has part: feature:2604422-2604583:1:exon
so has part: feature:2604719-2604804:1:exon
so has part: feature:2604948-2605110:1:exon
so has part: feature:2607574-2607680:1:exon
so has part: feature:2608182-2608235:1:exon
so has part: feature:2609233-2611143:1:exon

position:2604422:1
position: 2604422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2604422-2604583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2604719-2604804:1:exon

position:2604804:1
position: 2604804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2604948-2605110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2607574-2607680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2608182-2608235:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2609233-2611143:1:exon

LOC113883082
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113883082
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2667305..2667439
location: region:2667305-2667439:1
so has part: feature:2667305-2667439:1:exon
subclass of: SO_0000578

113883082
type: Gene
SIO_000068: ncbigene

position:2667305:1
position: 2667305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2667439:1
position: 2667439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2667305-2667439:1:exon

LOC113883082
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: snoRNA
gene: LOC113883082
product: small nucleolar RNA SNORA70
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00156
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003508564.1
SIO_010081: LOC113883082
subclass of: SO_0000673
so part of: LOC113883082
location: 2667305..2667439
location: region:2667305-2667439:1
so has part: feature:2667305-2667439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2667305-2667439:1:exon

LOC113882883
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2680135..2683041
location: region:2680135-2683041:1
so has part: feature:2680135-2683041:1:exon
subclass of: SO_0000011

113882883
type: Gene
SIO_000068: ncbigene

position:2680135:1
position: 2680135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2683041:1
position: 2683041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2680135-2683041:1:exon

LOC113882883
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882883
product: uncharacterized LOC113882883
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_003508464.1
SIO_010081: LOC113882883
subclass of: SO_0000673
so part of: LOC113882883
location: join(2680135..2680492,2682332..2683041)
location: region:2680135-2683041:1
so has part: feature:2680135-2680492:1:exon
so has part: feature:2682332-2683041:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2680135-2680492:1:exon

position:2680492:1
position: 2680492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2682332-2683041:1:exon

position:2682332:1
position: 2682332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113882938
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2733121..2750269)
location: region:2733121-2750269:-1
so has part: feature:2733121-2750269:-1:exon
subclass of: SO_0000011

113882938
type: Gene
SIO_000068: ncbigene

position:2733121:-1
position: 2733121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2750269:-1
position: 2750269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2733121-2750269:-1:exon

LOC113882938
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882938
product: uncharacterized LOC113882938, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_003508491.1
SIO_010081: LOC113882938
subclass of: SO_0000673
so part of: LOC113882938
location: complement(join(2733121..2733592,2742556..2742666,2749909..2750268))
location: region:2733121-2750268:-1
so has part: feature:2749909-2750268:-1:exon
so has part: feature:2742556-2742666:-1:exon
so has part: feature:2733121-2733592:-1:exon

position:2750268:-1
position: 2750268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2749909-2750268:-1:exon

position:2749909:-1
position: 2749909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2742556-2742666:-1:exon

position:2742556:-1
position: 2742556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2742666:-1
position: 2742666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2733121-2733592:-1:exon

position:2733592:-1
position: 2733592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113882938
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882938
product: uncharacterized LOC113882938, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_003508492.1
SIO_010081: LOC113882938
subclass of: SO_0000673
so part of: LOC113882938
location: complement(join(2735281..2735599,2742556..2742666,2749909..2750269))
location: region:2735281-2750269:-1
so has part: feature:2749909-2750269:-1:exon
so has part: feature:2742556-2742666:-1:exon
so has part: feature:2735281-2735599:-1:exon

position:2735281:-1
position: 2735281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2749909-2750269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2742556-2742666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2735281-2735599:-1:exon

position:2735599:-1
position: 2735599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF516
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2751247..2851496
location: region:2751247-2851496:1
so has part: feature:2751247-2851496:1:exon
subclass of: SO_0000010

113883019
type: Gene
SIO_000068: ncbigene

position:2751247:1
position: 2751247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2851496:1
position: 2851496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2751247-2851496:1:exon

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZNF516
product: zinc finger protein 516, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_027526336.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2751247..2751360,2795771..2797671,2827092..2828456,2835013..2835117,2835845..2835912,2847428..2851496)
location: region:2751247-2851496:1
so has part: feature:2751247-2751360:1:exon
so has part: feature:2795771-2797671:1:exon
so has part: feature:2827092-2828456:1:exon
so has part: feature:2835013-2835117:1:exon
so has part: feature:2835845-2835912:1:exon
so has part: feature:2847428-2851496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2751247-2751360:1:exon

position:2751360:1
position: 2751360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2795771-2797671:1:exon

position:2795771:1
position: 2795771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2797671:1
position: 2797671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2827092-2828456:1:exon

position:2827092:1
position: 2827092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2828456:1
position: 2828456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2835013-2835117:1:exon

position:2835013:1
position: 2835013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2835117:1
position: 2835117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2835845-2835912:1:exon

position:2835845:1
position: 2835845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2835912:1
position: 2835912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2847428-2851496:1:exon

position:2847428:1
position: 2847428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZNF516
product: zinc finger protein 516, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_027526334.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2751634..2751765,2795771..2797671,2827092..2828456,2835013..2835117,2835845..2835912,2847428..2851496)
location: region:2751634-2851496:1
so has part: feature:2751634-2751765:1:exon
so has part: feature:2795771-2797671:1:exon
so has part: feature:2827092-2828456:1:exon
so has part: feature:2835013-2835117:1:exon
so has part: feature:2835845-2835912:1:exon
so has part: feature:2847428-2851496:1:exon

position:2751634:1
position: 2751634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2751634-2751765:1:exon

position:2751765:1
position: 2751765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2795771-2797671:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2827092-2828456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2835013-2835117:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2835845-2835912:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2847428-2851496:1:exon

LOC113883020
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113883020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2752781..2754757)
location: region:2752781-2754757:-1
so has part: feature:2752781-2754757:-1:exon
subclass of: SO_0000011

113883020
type: Gene
SIO_000068: ncbigene

position:2752781:-1
position: 2752781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2754757:-1
position: 2754757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2752781-2754757:-1:exon

LOC113883020
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113883020
product: uncharacterized LOC113883020
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 108 samples with support for all annotated introns
transcript id: XR_003508526.1
SIO_010081: LOC113883020
subclass of: SO_0000673
so part of: LOC113883020
location: complement(join(2752781..2754036,2754716..2754757))
location: region:2752781-2754757:-1
so has part: feature:2754716-2754757:-1:exon
so has part: feature:2752781-2754036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2754716-2754757:-1:exon

position:2754716:-1
position: 2754716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2752781-2754036:-1:exon

position:2754036:-1
position: 2754036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZNF516
product: zinc finger protein 516, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_027526338.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2753999..2754539,2795771..2797671,2827092..2828456,2835013..2835117,2835845..2835912,2847428..2851496)
location: region:2753999-2851496:1
so has part: feature:2753999-2754539:1:exon
so has part: feature:2795771-2797671:1:exon
so has part: feature:2827092-2828456:1:exon
so has part: feature:2835013-2835117:1:exon
so has part: feature:2835845-2835912:1:exon
so has part: feature:2847428-2851496:1:exon

position:2753999:1
position: 2753999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2753999-2754539:1:exon

position:2754539:1
position: 2754539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2795771-2797671:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2827092-2828456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2835013-2835117:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2835845-2835912:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2847428-2851496:1:exon

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZNF516
product: zinc finger protein 516, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_027526333.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2754867..2754949,2795771..2797671,2827092..2828456,2835013..2835117,2835845..2835912,2847428..2851496)
location: region:2754867-2851496:1
so has part: feature:2754867-2754949:1:exon
so has part: feature:2795771-2797671:1:exon
so has part: feature:2827092-2828456:1:exon
so has part: feature:2835013-2835117:1:exon
so has part: feature:2835845-2835912:1:exon
so has part: feature:2847428-2851496:1:exon

position:2754867:1
position: 2754867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2754867-2754949:1:exon

position:2754949:1
position: 2754949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2795771-2797671:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2827092-2828456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2835013-2835117:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2835845-2835912:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2847428-2851496:1:exon

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZNF516
product: zinc finger protein 516, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_027526339.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2754867..2754949,2795771..2797671,2827092..2828456,2835013..2835117,2847428..2851496)
location: region:2754867-2851496:1
so has part: feature:2754867-2754949:1:exon
so has part: feature:2795771-2797671:1:exon
so has part: feature:2827092-2828456:1:exon
so has part: feature:2835013-2835117:1:exon
so has part: feature:2847428-2851496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2754867-2754949:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2795771-2797671:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2827092-2828456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2835013-2835117:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2847428-2851496:1:exon

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZNF516
product: zinc finger protein 516, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_027526340.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2754867..2754949,2795771..2797671,2827092..2828456,2847428..2851496)
location: region:2754867-2851496:1
so has part: feature:2754867-2754949:1:exon
so has part: feature:2795771-2797671:1:exon
so has part: feature:2827092-2828456:1:exon
so has part: feature:2847428-2851496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2754867-2754949:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2795771-2797671:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2827092-2828456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2847428-2851496:1:exon

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZNF516
product: zinc finger protein 516, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_027526337.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2766132..2767200,2795771..2797671,2827092..2828456,2835013..2835117,2835845..2835912,2847428..2851496)
location: region:2766132-2851496:1
so has part: feature:2766132-2767200:1:exon
so has part: feature:2795771-2797671:1:exon
so has part: feature:2827092-2828456:1:exon
so has part: feature:2835013-2835117:1:exon
so has part: feature:2835845-2835912:1:exon
so has part: feature:2847428-2851496:1:exon

position:2766132:1
position: 2766132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2766132-2767200:1:exon

position:2767200:1
position: 2767200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2795771-2797671:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2827092-2828456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2835013-2835117:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2835845-2835912:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2847428-2851496:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X1
translation: MERSREAEAELRGGRSPSRASRSPEADGDRALSHSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADSGKILLRSTRKEAEGVAAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHIAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSAPGPADSQQFFLQCLNLRPAAGTPTRGQTGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRAGAPGDPAPGPPDPRPAARPSRRAAVPAGHGKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRAPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEAPAHPTAGAKPHRCCFPEDVSLTVLSNGDQSHTLGNSPSGRAAGEPGAGIAACVSILESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPPRPAQAAGLQPPSESQAAYPRERPPDLHTKEHPTAGKRAPAPDLVPLDLSERSSRDDPGRREPASSLQAALAVHPCPYCGHKTYYPEVLWMHKRVWHRVSGQAVAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGAPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCTLWTAGPDGTRQTRPGPSPEQPPPKPKQEASPRPGATGGSGGFSRSATPTPTVITRAGPQAPASGRQGAGLGPPSKHSAPDPPKAKFSPQPQGQPHGKGDGATPLPPREPPSKAGSRGPAVPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGTLRTQAHQGDFICVECGKSFHQPSHLRAHMRAHTVLFESNGLRGADAHTTSADTPKQGRDHSNADAVQTVPLRKGT
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2795943..2797671,2827092..2828456,2835013..2835117,2835845..2835912,2847428..2847487)
location: region:2795943-2847487:1
so has part: feature:2795943-2797671:1:exon
so has part: feature:2827092-2828456:1:exon
so has part: feature:2835013-2835117:1:exon
so has part: feature:2835845-2835912:1:exon
so has part: feature:2847428-2847487:1:exon

XP_027382134.1
type: Protein
SIO_000068: ncbiprotein

position:2795943:1
position: 2795943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2847487:1
position: 2847487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2795943-2797671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2827092-2828456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2835013-2835117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2835845-2835912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2847428-2847487:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X1
translation: MERSREAEAELRGGRSPSRASRSPEADGDRALSHSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADSGKILLRSTRKEAEGVAAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHIAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSAPGPADSQQFFLQCLNLRPAAGTPTRGQTGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRAGAPGDPAPGPPDPRPAARPSRRAAVPAGHGKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRAPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEAPAHPTAGAKPHRCCFPEDVSLTVLSNGDQSHTLGNSPSGRAAGEPGAGIAACVSILESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPPRPAQAAGLQPPSESQAAYPRERPPDLHTKEHPTAGKRAPAPDLVPLDLSERSSRDDPGRREPASSLQAALAVHPCPYCGHKTYYPEVLWMHKRVWHRVSGQAVAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGAPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCTLWTAGPDGTRQTRPGPSPEQPPPKPKQEASPRPGATGGSGGFSRSATPTPTVITRAGPQAPASGRQGAGLGPPSKHSAPDPPKAKFSPQPQGQPHGKGDGATPLPPREPPSKAGSRGPAVPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGTLRTQAHQGDFICVECGKSFHQPSHLRAHMRAHTVLFESNGLRGADAHTTSADTPKQGRDHSNADAVQTVPLRKGT
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2795943..2797671,2827092..2828456,2835013..2835117,2835845..2835912,2847428..2847487)
location: region:2795943-2847487:1
so has part: feature:2795943-2797671:1:exon
so has part: feature:2827092-2828456:1:exon
so has part: feature:2835013-2835117:1:exon
so has part: feature:2835845-2835912:1:exon
so has part: feature:2847428-2847487:1:exon

XP_027382135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2795943-2797671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2827092-2828456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2835013-2835117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2835845-2835912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2847428-2847487:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X1
translation: MERSREAEAELRGGRSPSRASRSPEADGDRALSHSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADSGKILLRSTRKEAEGVAAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHIAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSAPGPADSQQFFLQCLNLRPAAGTPTRGQTGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRAGAPGDPAPGPPDPRPAARPSRRAAVPAGHGKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRAPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEAPAHPTAGAKPHRCCFPEDVSLTVLSNGDQSHTLGNSPSGRAAGEPGAGIAACVSILESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPPRPAQAAGLQPPSESQAAYPRERPPDLHTKEHPTAGKRAPAPDLVPLDLSERSSRDDPGRREPASSLQAALAVHPCPYCGHKTYYPEVLWMHKRVWHRVSGQAVAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGAPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCTLWTAGPDGTRQTRPGPSPEQPPPKPKQEASPRPGATGGSGGFSRSATPTPTVITRAGPQAPASGRQGAGLGPPSKHSAPDPPKAKFSPQPQGQPHGKGDGATPLPPREPPSKAGSRGPAVPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGTLRTQAHQGDFICVECGKSFHQPSHLRAHMRAHTVLFESNGLRGADAHTTSADTPKQGRDHSNADAVQTVPLRKGT
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2795943..2797671,2827092..2828456,2835013..2835117,2835845..2835912,2847428..2847487)
location: region:2795943-2847487:1
so has part: feature:2795943-2797671:1:exon
so has part: feature:2827092-2828456:1:exon
so has part: feature:2835013-2835117:1:exon
so has part: feature:2835845-2835912:1:exon
so has part: feature:2847428-2847487:1:exon

XP_027382137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2795943-2797671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2827092-2828456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2835013-2835117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2835845-2835912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2847428-2847487:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X1
translation: MERSREAEAELRGGRSPSRASRSPEADGDRALSHSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADSGKILLRSTRKEAEGVAAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHIAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSAPGPADSQQFFLQCLNLRPAAGTPTRGQTGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRAGAPGDPAPGPPDPRPAARPSRRAAVPAGHGKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRAPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEAPAHPTAGAKPHRCCFPEDVSLTVLSNGDQSHTLGNSPSGRAAGEPGAGIAACVSILESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPPRPAQAAGLQPPSESQAAYPRERPPDLHTKEHPTAGKRAPAPDLVPLDLSERSSRDDPGRREPASSLQAALAVHPCPYCGHKTYYPEVLWMHKRVWHRVSGQAVAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGAPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCTLWTAGPDGTRQTRPGPSPEQPPPKPKQEASPRPGATGGSGGFSRSATPTPTVITRAGPQAPASGRQGAGLGPPSKHSAPDPPKAKFSPQPQGQPHGKGDGATPLPPREPPSKAGSRGPAVPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGTLRTQAHQGDFICVECGKSFHQPSHLRAHMRAHTVLFESNGLRGADAHTTSADTPKQGRDHSNADAVQTVPLRKGT
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2795943..2797671,2827092..2828456,2835013..2835117,2835845..2835912,2847428..2847487)
location: region:2795943-2847487:1
so has part: feature:2795943-2797671:1:exon
so has part: feature:2827092-2828456:1:exon
so has part: feature:2835013-2835117:1:exon
so has part: feature:2835845-2835912:1:exon
so has part: feature:2847428-2847487:1:exon

XP_027382138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2795943-2797671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2827092-2828456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2835013-2835117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2835845-2835912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2847428-2847487:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X1
translation: MERSREAEAELRGGRSPSRASRSPEADGDRALSHSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADSGKILLRSTRKEAEGVAAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHIAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSAPGPADSQQFFLQCLNLRPAAGTPTRGQTGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRAGAPGDPAPGPPDPRPAARPSRRAAVPAGHGKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRAPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEAPAHPTAGAKPHRCCFPEDVSLTVLSNGDQSHTLGNSPSGRAAGEPGAGIAACVSILESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPPRPAQAAGLQPPSESQAAYPRERPPDLHTKEHPTAGKRAPAPDLVPLDLSERSSRDDPGRREPASSLQAALAVHPCPYCGHKTYYPEVLWMHKRVWHRVSGQAVAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGAPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCTLWTAGPDGTRQTRPGPSPEQPPPKPKQEASPRPGATGGSGGFSRSATPTPTVITRAGPQAPASGRQGAGLGPPSKHSAPDPPKAKFSPQPQGQPHGKGDGATPLPPREPPSKAGSRGPAVPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGTLRTQAHQGDFICVECGKSFHQPSHLRAHMRAHTVLFESNGLRGADAHTTSADTPKQGRDHSNADAVQTVPLRKGT
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2795943..2797671,2827092..2828456,2835013..2835117,2835845..2835912,2847428..2847487)
location: region:2795943-2847487:1
so has part: feature:2795943-2797671:1:exon
so has part: feature:2827092-2828456:1:exon
so has part: feature:2835013-2835117:1:exon
so has part: feature:2835845-2835912:1:exon
so has part: feature:2847428-2847487:1:exon

XP_027382139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2795943-2797671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2827092-2828456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2835013-2835117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2835845-2835912:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2847428-2847487:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X2
translation: MERSREAEAELRGGRSPSRASRSPEADGDRALSHSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADSGKILLRSTRKEAEGVAAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHIAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSAPGPADSQQFFLQCLNLRPAAGTPTRGQTGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRAGAPGDPAPGPPDPRPAARPSRRAAVPAGHGKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRAPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEAPAHPTAGAKPHRCCFPEDVSLTVLSNGDQSHTLGNSPSGRAAGEPGAGIAACVSILESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPPRPAQAAGLQPPSESQAAYPRERPPDLHTKEHPTAGKRAPAPDLVPLDLSERSSRDDPGRREPASSLQAALAVHPCPYCGHKTYYPEVLWMHKRVWHRVSGQAVAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGAPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCTLWTAGPDGTRQTRPGPSPEQPPPKPKQEASPRPGATGGSGGFSRSATPTPTVITRAGPQAPASGRQGAGLGPPSKHSAPDPPKAKFSPQPQGQPHGKGDGATPLPPREPPSKAGSRGPAVPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGTLRTQAHQGDFICVECGKSFHQPSHLRAHMRAHTGERPF
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2795943..2797671,2827092..2828456,2835013..2835117,2847428..2847444)
location: region:2795943-2847444:1
so has part: feature:2795943-2797671:1:exon
so has part: feature:2827092-2828456:1:exon
so has part: feature:2835013-2835117:1:exon
so has part: feature:2847428-2847444:1:exon

XP_027382140.1
type: Protein
SIO_000068: ncbiprotein

position:2847444:1
position: 2847444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2795943-2797671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2827092-2828456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2835013-2835117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2847428-2847444:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X3
translation: MERSREAEAELRGGRSPSRASRSPEADGDRALSHSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADSGKILLRSTRKEAEGVAAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHIAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSAPGPADSQQFFLQCLNLRPAAGTPTRGQTGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRAGAPGDPAPGPPDPRPAARPSRRAAVPAGHGKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRAPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEAPAHPTAGAKPHRCCFPEDVSLTVLSNGDQSHTLGNSPSGRAAGEPGAGIAACVSILESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPPRPAQAAGLQPPSESQAAYPRERPPDLHTKEHPTAGKRAPAPDLVPLDLSERSSRDDPGRREPASSLQAALAVHPCPYCGHKTYYPEVLWMHKRVWHRVSGQAVAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGAPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCTLWTAGPDGTRQTRPGPSPEQPPPKPKQEASPRPGATGGSGGFSRSATPTPTVITRAGPQAPASGRQGAGLGPPSKHSAPDPPKAKFSPQPQGQPHGKGDGATPLPPREPPSKAGSRGPAVPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGERPF
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2795943..2797671,2827092..2828456,2847428..2847444)
location: region:2795943-2847444:1
so has part: feature:2795943-2797671:1:exon
so has part: feature:2827092-2828456:1:exon
so has part: feature:2847428-2847444:1:exon

XP_027382141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2795943-2797671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2827092-2828456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2847428-2847444:1:exon

LOC113882965
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2900272..2937760
location: region:2900272-2937760:1
so has part: feature:2900272-2937760:1:exon
subclass of: SO_0000011

113882965
type: Gene
SIO_000068: ncbigene

position:2900272:1
position: 2900272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2937760:1
position: 2937760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2900272-2937760:1:exon

LOC113882965
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882965
product: uncharacterized LOC113882965, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003508506.1
SIO_010081: LOC113882965
subclass of: SO_0000673
so part of: LOC113882965
location: join(2900272..2900382,2935929..2936018,2937228..2937760)
location: region:2900272-2937760:1
so has part: feature:2900272-2900382:1:exon
so has part: feature:2935929-2936018:1:exon
so has part: feature:2937228-2937760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2900272-2900382:1:exon

position:2900382:1
position: 2900382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2935929-2936018:1:exon

position:2935929:1
position: 2935929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2936018:1
position: 2936018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2937228-2937760:1:exon

position:2937228:1
position: 2937228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113882965
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882965
product: uncharacterized LOC113882965, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003508505.1
SIO_010081: LOC113882965
subclass of: SO_0000673
so part of: LOC113882965
location: join(2934762..2934919,2935929..2936018,2937228..2937760)
location: region:2934762-2937760:1
so has part: feature:2934762-2934919:1:exon
so has part: feature:2935929-2936018:1:exon
so has part: feature:2937228-2937760:1:exon

position:2934762:1
position: 2934762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2934762-2934919:1:exon

position:2934919:1
position: 2934919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2935929-2936018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2937228-2937760:1:exon

LOC113882913
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3161372..3188343
location: region:3161372-3188343:1
so has part: feature:3161372-3188343:1:exon
subclass of: SO_0000011

113882913
type: Gene
SIO_000068: ncbigene

position:3161372:1
position: 3161372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3188343:1
position: 3188343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3161372-3188343:1:exon

LOC113882913
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882913
product: uncharacterized LOC113882913, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_003508484.1
SIO_010081: LOC113882913
subclass of: SO_0000673
so part of: LOC113882913
location: join(3161372..3161634,3171174..3171258,3171770..3172049)
location: region:3161372-3172049:1
so has part: feature:3161372-3161634:1:exon
so has part: feature:3171174-3171258:1:exon
so has part: feature:3171770-3172049:1:exon

position:3172049:1
position: 3172049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3161372-3161634:1:exon

position:3161634:1
position: 3161634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3171174-3171258:1:exon

position:3171174:1
position: 3171174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3171258:1
position: 3171258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3171770-3172049:1:exon

position:3171770:1
position: 3171770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113882913
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882913
product: uncharacterized LOC113882913, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_003508485.1
SIO_010081: LOC113882913
subclass of: SO_0000673
so part of: LOC113882913
location: join(3170654..3171258,3171770..3171889,3173243..3173753)
location: region:3170654-3173753:1
so has part: feature:3170654-3171258:1:exon
so has part: feature:3171770-3171889:1:exon
so has part: feature:3173243-3173753:1:exon

position:3170654:1
position: 3170654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3173753:1
position: 3173753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3170654-3171258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3171770-3171889:1:exon

position:3171889:1
position: 3171889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3173243-3173753:1:exon

position:3173243:1
position: 3173243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113882913
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882913
product: uncharacterized LOC113882913, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_003508483.1
SIO_010081: LOC113882913
subclass of: SO_0000673
so part of: LOC113882913
location: join(3170932..3171258,3171770..3171889,3185663..3188343)
location: region:3170932-3188343:1
so has part: feature:3170932-3171258:1:exon
so has part: feature:3171770-3171889:1:exon
so has part: feature:3185663-3188343:1:exon

position:3170932:1
position: 3170932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3170932-3171258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3171770-3171889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3185663-3188343:1:exon

position:3185663:1
position: 3185663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113882913
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882913
product: uncharacterized LOC113882913, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XR_003508482.1
SIO_010081: LOC113882913
subclass of: SO_0000673
so part of: LOC113882913
location: join(3170933..3171258,3171770..3172049)
location: region:3170933-3172049:1
so has part: feature:3170933-3171258:1:exon
so has part: feature:3171770-3172049:1:exon

position:3170933:1
position: 3170933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3170933-3171258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3171770-3172049:1:exon

TSHZ1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TSHZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3601950..3681542)
location: region:3601950-3681542:-1
so has part: feature:3601950-3681542:-1:exon
subclass of: SO_0000010

113882905
type: Gene
SIO_000068: ncbigene

position:3601950:-1
position: 3601950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3681542:-1
position: 3681542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3601950-3681542:-1:exon

TSHZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TSHZ1
product: teashirt zinc finger homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 ESTs, 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 176 samples with support for all annotated introns
transcript id: XM_027526112.1
SIO_010081: TSHZ1
subclass of: SO_0000673
so part of: TSHZ1
location: complement(join(3601950..3606458,3681404..3681542))
location: region:3601950-3681542:-1
so has part: feature:3681404-3681542:-1:exon
so has part: feature:3601950-3606458:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3681404-3681542:-1:exon

position:3681404:-1
position: 3681404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3601950-3606458:-1:exon

position:3606458:-1
position: 3606458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSHZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TSHZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teashirt homolog 1
translation: MPRRKQQAPRRSAAYVPEEELKAAVIDEGSVEEDGLPGDVQEADFACSEEAEIKEAQSYQNSPISTATNQDAGYGSPFSEHSDQPAHFKSSSSKEEKEERQGAEGVSYPQDSLAQIKAVYANLFSESCWSSLALDLKKSASTTSTSDAAQKEGSTPAPTPPTSTAGATGTTASTPSSGSGASGGSGYDWHQAALAKTLQQTSSYGLLPEPSLFSTVQLYRQNNKLYGSVFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNRDKDSEKTKRWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVPLKEPVPALTKLVPSTKKRALHELAAPGSPEPAGAAAAEAALSEAAKEQKTANPYVTPNNRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVTTSASKKGKQLVLDPVVEEKIQSIPLPPTTHTRLPAAATTAHVKKQPDSPAGPTIAEEKKEPEKDKAALVAGEVDKKIKEEGEDTGEKFEPTALYQYLREEDLDDSAKGGVDILKSLENTVSTAISKAQNGAPSWGGYPSIHAAYQLPGTVKPPPAVQSVQMQPSFAGGVKPLSAEHGALLHSPGSLTPPPHKSNVSAMEELVEKVTGKVSVKKEERPAEKEKGSPAKAASPAAKENKDFPRADELGGSSKPQPKKGPEADGGKAKKEGTGDAHTPNGTEPLKAKVTNGCNNLAIITDHSPEPSFINPLSALQSIMNTHLGKVSRPVSPSLDPLAMLYKISTSMLDKPAYPAPPAKPPGAADRYFYENSDQPIDLTKSKSKPLVPGASDGVSSPLRESALMDISDMVKNLTGRLTPKSSTPSTVSEKSDADGSSFEEALDELSPVHKRKGRQSNWNPQHLLILQAQFASSLRETAEGKYIMSDLGPQERVHISKFTGLSMTTISHWLANVKYQLRRTGGTKFLKNLDTGHPVFFCNDCASQFRTASTYINHLETHLGFSLKDLSKLPLNQIQEQQNVSKVLASKALGPSGAAEDELGSTFQCKLCNRTFASKHAVKLHLSKTHGKSPEDHLIYVTELEKQ
SIO_010081: TSHZ1
subclass of: SO_0000673
so part of: TSHZ1
location: complement(join(3603271..3606458,3681404..3681443))
location: region:3603271-3681443:-1
so has part: feature:3681404-3681443:-1:exon
so has part: feature:3603271-3606458:-1:exon

XP_027381913.1
type: Protein
SIO_000068: ncbiprotein

position:3603271:-1
position: 3603271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3681443:-1
position: 3681443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3681404-3681443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3603271-3606458:-1:exon

ZADH2
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: ZADH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3683702..3695728
location: region:3683702-3695728:1
so has part: feature:3683702-3695728:1:exon
subclass of: SO_0000010

113882907
type: Gene
SIO_000068: ncbigene

position:3683702:1
position: 3683702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3695728:1
position: 3695728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3683702-3695728:1:exon

ZADH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZADH2
product: zinc binding alcohol dehydrogenase domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 73 ESTs, 4 long SRA reads, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 215 samples with support for all annotated introns
transcript id: XM_027526114.1
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: join(3683702..3684477,3690805..3695728)
location: region:3683702-3695728:1
so has part: feature:3683702-3684477:1:exon
so has part: feature:3690805-3695728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3683702-3684477:1:exon

position:3684477:1
position: 3684477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3690805-3695728:1:exon

position:3690805:1
position: 3690805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZADH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZADH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin reductase 3 isoform X2
translation: MQRLALAGTRAIVDMSYARHFLDFQGSAIPSKMQKLVVTRLSPNFREAVTLRRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKTPFDAGFEGVGEVVALGLSASAAFMVGQAVAYMAPGSFAEYTVVPARVAIPVPGLKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIGTCSSAEKSAFLKSVGCDRPINYNTEHVGTVLRQEYPQGVDVVYESVGGAMFDLAVDALATRGRLIVIGFVSGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLPEFRGAMDHLLKMYAGGELVCEVDTGGLSAEGRFTGLESVFRAVDYMYMRKNTGKIVVELPPSVNSKL
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: join(3684269..3684477,3690805..3691729)
location: region:3684269-3691729:1
so has part: feature:3684269-3684477:1:exon
so has part: feature:3690805-3691729:1:exon

XP_027381915.1
type: Protein
SIO_000068: ncbiprotein

position:3684269:1
position: 3684269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3691729:1
position: 3691729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3684269-3684477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3690805-3691729:1:exon

ZADH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZADH2
product: zinc binding alcohol dehydrogenase domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_027526113.1
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: join(3684810..3684902,3690805..3695728)
location: region:3684810-3695728:1
so has part: feature:3684810-3684902:1:exon
so has part: feature:3690805-3695728:1:exon

position:3684810:1
position: 3684810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3684810-3684902:1:exon

position:3684902:1
position: 3684902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3690805-3695728:1:exon

ZADH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZADH2
product: zinc binding alcohol dehydrogenase domain containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_027526116.1
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: join(3685724..3685846,3690805..3695728)
location: region:3685724-3695728:1
so has part: feature:3685724-3685846:1:exon
so has part: feature:3690805-3695728:1:exon

position:3685724:1
position: 3685724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3685724-3685846:1:exon

position:3685846:1
position: 3685846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3690805-3695728:1:exon

ZADH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZADH2
product: zinc binding alcohol dehydrogenase domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_027526115.1
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: join(3687433..3687941,3690805..3695728)
location: region:3687433-3695728:1
so has part: feature:3687433-3687941:1:exon
so has part: feature:3690805-3695728:1:exon

position:3687433:1
position: 3687433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3687433-3687941:1:exon

position:3687941:1
position: 3687941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3690805-3695728:1:exon

ZADH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZADH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin reductase 3 isoform X1
translation: MVGQAVAYMAPGSFAEYTVVPARVAIPVPGLKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIGTCSSAEKSAFLKSVGCDRPINYNTEHVGTVLRQEYPQGVDVVYESVGGAMFDLAVDALATRGRLIVIGFVSGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLPEFRGAMDHLLKMYAGGELVCEVDTGGLSAEGRFTGLESVFRAVDYMYMRKNTGKIVVELPPSVNSKL
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: 3690941..3691729
location: region:3690941-3691729:1
so has part: feature:3690941-3691729:1:exon

XP_027381914.1
type: Protein
SIO_000068: ncbiprotein

position:3690941:1
position: 3690941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3690941-3691729:1:exon

ZADH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZADH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin reductase 3 isoform X1
translation: MVGQAVAYMAPGSFAEYTVVPARVAIPVPGLKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIGTCSSAEKSAFLKSVGCDRPINYNTEHVGTVLRQEYPQGVDVVYESVGGAMFDLAVDALATRGRLIVIGFVSGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLPEFRGAMDHLLKMYAGGELVCEVDTGGLSAEGRFTGLESVFRAVDYMYMRKNTGKIVVELPPSVNSKL
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: 3690941..3691729
location: region:3690941-3691729:1
so has part: feature:3690941-3691729:1:exon

XP_027381916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3690941-3691729:1:exon

ZADH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZADH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin reductase 3 isoform X1
translation: MVGQAVAYMAPGSFAEYTVVPARVAIPVPGLKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIGTCSSAEKSAFLKSVGCDRPINYNTEHVGTVLRQEYPQGVDVVYESVGGAMFDLAVDALATRGRLIVIGFVSGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLPEFRGAMDHLLKMYAGGELVCEVDTGGLSAEGRFTGLESVFRAVDYMYMRKNTGKIVVELPPSVNSKL
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: 3690941..3691729
location: region:3690941-3691729:1
so has part: feature:3690941-3691729:1:exon

XP_027381917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3690941-3691729:1:exon

ZNF407
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: ZNF407
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3769623..4157243)
location: region:3769623-4157243:-1
so has part: feature:3769623-4157243:-1:exon
subclass of: SO_0000010

113882998
type: Gene
SIO_000068: ncbigene

position:3769623:-1
position: 3769623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4157243:-1
position: 4157243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3769623-4157243:-1:exon

ZNF407
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZNF407
product: zinc finger protein 407, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_027526301.1
SIO_010081: ZNF407
subclass of: SO_0000673
so part of: ZNF407
location: complement(join(3769623..3771937,3895685..3895863,3920428..3920548,3927833..3927916,3931825..3931991,4009716..4009790,4121492..4121606,4127033..4131669,4156999..4157243))
location: region:3769623-4157243:-1
so has part: feature:4156999-4157243:-1:exon
so has part: feature:4127033-4131669:-1:exon
so has part: feature:4121492-4121606:-1:exon
so has part: feature:4009716-4009790:-1:exon
so has part: feature:3931825-3931991:-1:exon
so has part: feature:3927833-3927916:-1:exon
so has part: feature:3920428-3920548:-1:exon
so has part: feature:3895685-3895863:-1:exon
so has part: feature:3769623-3771937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4156999-4157243:-1:exon

position:4156999:-1
position: 4156999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4127033-4131669:-1:exon

position:4127033:-1
position: 4127033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4131669:-1
position: 4131669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4121492-4121606:-1:exon

position:4121492:-1
position: 4121492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4121606:-1
position: 4121606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4009716-4009790:-1:exon

position:4009716:-1
position: 4009716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4009790:-1
position: 4009790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3931825-3931991:-1:exon

position:3931825:-1
position: 3931825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3931991:-1
position: 3931991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3927833-3927916:-1:exon

position:3927833:-1
position: 3927833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3927916:-1
position: 3927916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3920428-3920548:-1:exon

position:3920428:-1
position: 3920428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3920548:-1
position: 3920548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3895685-3895863:-1:exon

position:3895685:-1
position: 3895685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3895863:-1
position: 3895863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3769623-3771937:-1:exon

position:3771937:-1
position: 3771937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF407
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: ZNF407
product: zinc finger protein 407, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_027526302.1
SIO_010081: ZNF407
subclass of: SO_0000673
so part of: ZNF407
location: complement(join(3769623..3771937,3895685..3895863,3920428..3920548,3927833..3927916,3931825..3931991,4009716..4009790,4121492..4121606,4127033..4131669,4136103..4136919))
location: region:3769623-4136919:-1
so has part: feature:4136103-4136919:-1:exon
so has part: feature:4127033-4131669:-1:exon
so has part: feature:4121492-4121606:-1:exon
so has part: feature:4009716-4009790:-1:exon
so has part: feature:3931825-3931991:-1:exon
so has part: feature:3927833-3927916:-1:exon
so has part: feature:3920428-3920548:-1:exon
so has part: feature:3895685-3895863:-1:exon
so has part: feature:3769623-3771937:-1:exon

position:4136919:-1
position: 4136919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4136103-4136919:-1:exon

position:4136103:-1
position: 4136103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4127033-4131669:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4121492-4121606:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4009716-4009790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3931825-3931991:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3927833-3927916:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3920428-3920548:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3895685-3895863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3769623-3771937:-1:exon

ZNF407
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZNF407
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 407
translation: MMDPGKKLGSDEGDHVNEEAEHPSHSASHGVDRGPVSDETADSAENSTNKRGFAESSDLDHIVEEDNGNKRASKRMKLAEAEPLGPGEPRTHGSGSPEGTGSGEGVALPGSEVEPLSSGRDGSPGLPGHPSPGEMAAEKEPAQETTAFLDLGGEPPSPPKEMRGSGALGGPCACSPVSCPHVEKHAVRPSPRPEDQACGPAADGGLAFPGHTGQARGPPRAFSCELCGFQCAEENLLNAHCLGKTHLRRQNLAARGGFVQILTKQPLPKKPSPVGAKAGRTKPRASRPVARNGDSKALRSVGAGTFRDFRGSFSKQSGHGSELRVEMRPSRNTSPEKMEVVEENVTSHDAAGNPENQSRKLGMAVTSERLLDRLESSRNTAQAAPGLSTASRPRAERGFLVLGSGFRRRAGAFALKGQVKKRCGLLGVSKRGANEVQRLYSKHLRAPIKMSDAESAPLHGDPRLTPPETQAPKQDRTNAHLPGSSDSLARRPAPDHQVACTCSACGHTATSRAELEIHVTRCHVGELRFHCQTCGFSSTSRRDVEEHAHSHQHQQTASGLRCQCCLFTSPNEVDLRDHMKEKHSMGFLCPPCHLFFSSEKDMEEHRATEKHIHLLGQTKSSQSFNGDSALQTFPLSTLESENAKVSVSEAGKSAQEEPAKSRVSHGNEARHSSKPQFQCKKCFYKTRSSTVLTRHIKLRHGQDYHFLCKACNLYSLSKEGMEKHIKRSKHLENAKKNNIGLSFEECIERVCIGANDKKEELTIPGNGRTEGHGEGVQIQEQSCLDQSILPPQELSLSGVITKEGELAPPPTPKRGRPKGNISRTCSHCGLLASSITNLTVHIRRKHSHQYSYLCKVCKYYTVTKGDMERHCATKKHKGRVEIEASGKQSSDIVVGPEGGNLDASRKNTSVADEPANPPVEADTSVSEQPPLEQGSPVEVEVENVFHPEDRETGSHLIEKKEQTSVDPEDLQGDTCPQKDDASTDENRCTHCEFKAHSSTSLELHVKRKHTREFAFYCMACDYYAVTRREMTRHAATEKHKMKRQSYLNSTNVQASSSEVSKTIIIPQGQQQQNSEEFQIISDQPSETLKSRNAADCSILDENTSLDMSKVFCASDSVETETEEDSNLSEDHSFCETFQQPLAKDKVIKPEEMVPLSISSNCGSPSKFQNENSGSSALNHETAKKRHSMLNDISSPNTHGESDGGNAEDKADKVLGKRGCLRAVDGEHPAKSAMLTAPRDLLNLGSSDQDRAGSMQSSGDLKDVPGDPVLESKEILMNSRHETKVILEEDGPASDSTIDNNDVYETIISIDDKGQAVYSFGRFDSSIIRIKNPEDGELFDQSQEGLVAAGVRMSELPLKDCAQGVKKKKADSSSFVESTRIRCDDCGFLADGLSGLNVHIAMKHPTKEKHFHCLLCGKSFYTESNLHQHLASAGHMRNEQASVEELPEGGATFKCVKCTEPFDSEQNLFLHIKGQHEELLREVNKYIVEDTEQINREREENQGNVCKYCGKMCRSSNSMAFLAHIRTHTGSKPFKCKICHFATAQLGDARNHVKRHLGMREYKCHVCGVAFVMKKHLNTHLLGKHGVGTPKERKFTCHLCDRSFTEKWALNNHMKLHTGEKPFKCTWPTCHYSFLTASAMKDHYRTHTGEKSFLCDLCGFAGGTRHALTKHRRQHTGEKPFKCDECNFASTTQSHLTRHKRVHTGEKPYRCPWCDYRSNCAENIRKHILHTGKHEGVKMYNCPKCDYGTNIPVEFRNHLKEQHPDIENPDLAYLHAGIVSKSYECRLKGQGATFVETDSPFTAAALAEESPVKDRPLRSSRRPAAPPEPVQQVIIIQGYEGEFALDASVEETAAATLQTLALAGQVARVVHITEDGQVIAAGQSGAQGGSGAPSPGLPEPLADGATQVVVVGGSMEGHGMDEPLSPSGAVIQQVTKQEILGLAEAGVPPPDAASALDALLCAVTELGGAEGPAAAEEKGRAGPRDVLVQLPGQEAATPAAP…
SIO_010081: ZNF407
subclass of: SO_0000673
so part of: ZNF407
location: complement(join(3770634..3771937,3895685..3895863,3920428..3920548,3927833..3927916,3931825..3931991,4009716..4009790,4121492..4121606,4127033..4131617))
location: region:3770634-4131617:-1
so has part: feature:4127033-4131617:-1:exon
so has part: feature:4121492-4121606:-1:exon
so has part: feature:4009716-4009790:-1:exon
so has part: feature:3931825-3931991:-1:exon
so has part: feature:3927833-3927916:-1:exon
so has part: feature:3920428-3920548:-1:exon
so has part: feature:3895685-3895863:-1:exon
so has part: feature:3770634-3771937:-1:exon

XP_027382102.1
type: Protein
SIO_000068: ncbiprotein

position:3770634:-1
position: 3770634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4131617:-1
position: 4131617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4127033-4131617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4121492-4121606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4009716-4009790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3931825-3931991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3927833-3927916:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3920428-3920548:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3895685-3895863:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3770634-3771937:-1:exon

ZNF407
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: ZNF407
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 407
translation: MMDPGKKLGSDEGDHVNEEAEHPSHSASHGVDRGPVSDETADSAENSTNKRGFAESSDLDHIVEEDNGNKRASKRMKLAEAEPLGPGEPRTHGSGSPEGTGSGEGVALPGSEVEPLSSGRDGSPGLPGHPSPGEMAAEKEPAQETTAFLDLGGEPPSPPKEMRGSGALGGPCACSPVSCPHVEKHAVRPSPRPEDQACGPAADGGLAFPGHTGQARGPPRAFSCELCGFQCAEENLLNAHCLGKTHLRRQNLAARGGFVQILTKQPLPKKPSPVGAKAGRTKPRASRPVARNGDSKALRSVGAGTFRDFRGSFSKQSGHGSELRVEMRPSRNTSPEKMEVVEENVTSHDAAGNPENQSRKLGMAVTSERLLDRLESSRNTAQAAPGLSTASRPRAERGFLVLGSGFRRRAGAFALKGQVKKRCGLLGVSKRGANEVQRLYSKHLRAPIKMSDAESAPLHGDPRLTPPETQAPKQDRTNAHLPGSSDSLARRPAPDHQVACTCSACGHTATSRAELEIHVTRCHVGELRFHCQTCGFSSTSRRDVEEHAHSHQHQQTASGLRCQCCLFTSPNEVDLRDHMKEKHSMGFLCPPCHLFFSSEKDMEEHRATEKHIHLLGQTKSSQSFNGDSALQTFPLSTLESENAKVSVSEAGKSAQEEPAKSRVSHGNEARHSSKPQFQCKKCFYKTRSSTVLTRHIKLRHGQDYHFLCKACNLYSLSKEGMEKHIKRSKHLENAKKNNIGLSFEECIERVCIGANDKKEELTIPGNGRTEGHGEGVQIQEQSCLDQSILPPQELSLSGVITKEGELAPPPTPKRGRPKGNISRTCSHCGLLASSITNLTVHIRRKHSHQYSYLCKVCKYYTVTKGDMERHCATKKHKGRVEIEASGKQSSDIVVGPEGGNLDASRKNTSVADEPANPPVEADTSVSEQPPLEQGSPVEVEVENVFHPEDRETGSHLIEKKEQTSVDPEDLQGDTCPQKDDASTDENRCTHCEFKAHSSTSLELHVKRKHTREFAFYCMACDYYAVTRREMTRHAATEKHKMKRQSYLNSTNVQASSSEVSKTIIIPQGQQQQNSEEFQIISDQPSETLKSRNAADCSILDENTSLDMSKVFCASDSVETETEEDSNLSEDHSFCETFQQPLAKDKVIKPEEMVPLSISSNCGSPSKFQNENSGSSALNHETAKKRHSMLNDISSPNTHGESDGGNAEDKADKVLGKRGCLRAVDGEHPAKSAMLTAPRDLLNLGSSDQDRAGSMQSSGDLKDVPGDPVLESKEILMNSRHETKVILEEDGPASDSTIDNNDVYETIISIDDKGQAVYSFGRFDSSIIRIKNPEDGELFDQSQEGLVAAGVRMSELPLKDCAQGVKKKKADSSSFVESTRIRCDDCGFLADGLSGLNVHIAMKHPTKEKHFHCLLCGKSFYTESNLHQHLASAGHMRNEQASVEELPEGGATFKCVKCTEPFDSEQNLFLHIKGQHEELLREVNKYIVEDTEQINREREENQGNVCKYCGKMCRSSNSMAFLAHIRTHTGSKPFKCKICHFATAQLGDARNHVKRHLGMREYKCHVCGVAFVMKKHLNTHLLGKHGVGTPKERKFTCHLCDRSFTEKWALNNHMKLHTGEKPFKCTWPTCHYSFLTASAMKDHYRTHTGEKSFLCDLCGFAGGTRHALTKHRRQHTGEKPFKCDECNFASTTQSHLTRHKRVHTGEKPYRCPWCDYRSNCAENIRKHILHTGKHEGVKMYNCPKCDYGTNIPVEFRNHLKEQHPDIENPDLAYLHAGIVSKSYECRLKGQGATFVETDSPFTAAALAEESPVKDRPLRSSRRPAAPPEPVQQVIIIQGYEGEFALDASVEETAAATLQTLALAGQVARVVHITEDGQVIAAGQSGAQGGSGAPSPGLPEPLADGATQVVVVGGSMEGHGMDEPLSPSGAVIQQVTKQEILGLAEAGVPPPDAASALDALLCAVTELGGAEGPAAAEEKGRAGPRDVLVQLPGQEAATPAAP…
SIO_010081: ZNF407
subclass of: SO_0000673
so part of: ZNF407
location: complement(join(3770634..3771937,3895685..3895863,3920428..3920548,3927833..3927916,3931825..3931991,4009716..4009790,4121492..4121606,4127033..4131617))
location: region:3770634-4131617:-1
so has part: feature:4127033-4131617:-1:exon
so has part: feature:4121492-4121606:-1:exon
so has part: feature:4009716-4009790:-1:exon
so has part: feature:3931825-3931991:-1:exon
so has part: feature:3927833-3927916:-1:exon
so has part: feature:3920428-3920548:-1:exon
so has part: feature:3895685-3895863:-1:exon
so has part: feature:3770634-3771937:-1:exon

XP_027382103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4127033-4131617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4121492-4121606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4009716-4009790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3931825-3931991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3927833-3927916:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3920428-3920548:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3895685-3895863:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3770634-3771937:-1:exon

CNDP1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: CNDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4165003..4194333)
location: region:4165003-4194333:-1
so has part: feature:4165003-4194333:-1:exon
subclass of: SO_0000010

113882903
type: Gene
SIO_000068: ncbigene

position:4165003:-1
position: 4165003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4194333:-1
position: 4194333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4165003-4194333:-1:exon

CNDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CNDP1
product: carnosine dipeptidase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_027526101.1
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(4165003..4166123,4166251..4166322,4166507..4166654,4173244..4173385,4175355..4175519,4176761..4176921,4181058..4181142,4182334..4182534,4186470..4186558,4187205..4187367,4188535..4188684,4190148..4190391,4194141..4194333))
location: region:4165003-4194333:-1
so has part: feature:4194141-4194333:-1:exon
so has part: feature:4190148-4190391:-1:exon
so has part: feature:4188535-4188684:-1:exon
so has part: feature:4187205-4187367:-1:exon
so has part: feature:4186470-4186558:-1:exon
so has part: feature:4182334-4182534:-1:exon
so has part: feature:4181058-4181142:-1:exon
so has part: feature:4176761-4176921:-1:exon
so has part: feature:4175355-4175519:-1:exon
so has part: feature:4173244-4173385:-1:exon
so has part: feature:4166507-4166654:-1:exon
so has part: feature:4166251-4166322:-1:exon
so has part: feature:4165003-4166123:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4194141-4194333:-1:exon

position:4194141:-1
position: 4194141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4190148-4190391:-1:exon

position:4190148:-1
position: 4190148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4190391:-1
position: 4190391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4188535-4188684:-1:exon

position:4188535:-1
position: 4188535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4188684:-1
position: 4188684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4187205-4187367:-1:exon

position:4187205:-1
position: 4187205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4187367:-1
position: 4187367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4186470-4186558:-1:exon

position:4186470:-1
position: 4186470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4186558:-1
position: 4186558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4182334-4182534:-1:exon

position:4182334:-1
position: 4182334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4182534:-1
position: 4182534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4181058-4181142:-1:exon

position:4181058:-1
position: 4181058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4181142:-1
position: 4181142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4176761-4176921:-1:exon

position:4176761:-1
position: 4176761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4176921:-1
position: 4176921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4175355-4175519:-1:exon

position:4175355:-1
position: 4175355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4175519:-1
position: 4175519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4173244-4173385:-1:exon

position:4173244:-1
position: 4173244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4173385:-1
position: 4173385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4166507-4166654:-1:exon

position:4166507:-1
position: 4166507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4166654:-1
position: 4166654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4166251-4166322:-1:exon

position:4166251:-1
position: 4166251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4166322:-1
position: 4166322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4165003-4166123:-1:exon

position:4166123:-1
position: 4166123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CNDP1
product: carnosine dipeptidase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_027526100.1
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(4165003..4166322,4166507..4166654,4173244..4173385,4175355..4175519,4176761..4176921,4181058..4181142,4182334..4182534,4186470..4186558,4187205..4187367,4188535..4188684,4190148..4190391,4194141..4194333))
location: region:4165003-4194333:-1
so has part: feature:4194141-4194333:-1:exon
so has part: feature:4190148-4190391:-1:exon
so has part: feature:4188535-4188684:-1:exon
so has part: feature:4187205-4187367:-1:exon
so has part: feature:4186470-4186558:-1:exon
so has part: feature:4182334-4182534:-1:exon
so has part: feature:4181058-4181142:-1:exon
so has part: feature:4176761-4176921:-1:exon
so has part: feature:4175355-4175519:-1:exon
so has part: feature:4173244-4173385:-1:exon
so has part: feature:4166507-4166654:-1:exon
so has part: feature:4165003-4166322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4194141-4194333:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190148-4190391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4188535-4188684:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4187205-4187367:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4186470-4186558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4182334-4182534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4181058-4181142:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4176761-4176921:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4175355-4175519:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4173244-4173385:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4166507-4166654:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4165003-4166322:-1:exon

CNDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CNDP1
product: carnosine dipeptidase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027526102.1
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(4165003..4166322,4166507..4166654,4173244..4173385,4175355..4175519,4176761..4176921,4181058..4181142,4182334..4182534,4186470..4186558,4187205..4187367,4188535..4188684,4190148..4190273,4194141..4194321))
location: region:4165003-4194321:-1
so has part: feature:4194141-4194321:-1:exon
so has part: feature:4190148-4190273:-1:exon
so has part: feature:4188535-4188684:-1:exon
so has part: feature:4187205-4187367:-1:exon
so has part: feature:4186470-4186558:-1:exon
so has part: feature:4182334-4182534:-1:exon
so has part: feature:4181058-4181142:-1:exon
so has part: feature:4176761-4176921:-1:exon
so has part: feature:4175355-4175519:-1:exon
so has part: feature:4173244-4173385:-1:exon
so has part: feature:4166507-4166654:-1:exon
so has part: feature:4165003-4166322:-1:exon

position:4194321:-1
position: 4194321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4194141-4194321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4190148-4190273:-1:exon

position:4190273:-1
position: 4190273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4188535-4188684:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4187205-4187367:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4186470-4186558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4182334-4182534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4181058-4181142:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4176761-4176921:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4175355-4175519:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4173244-4173385:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4166507-4166654:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4165003-4166322:-1:exon

CNDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CNDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-Ala-His dipeptidase isoform X2
translation: MAPAVAHSQAESLLAFRLLLVGGMFSASTPPPGPLEKVFQYIDLHQDEFVQTLKEWVAVESDSVQPVPRLRRELLRMAGLAADRLRGLGARVASVDAGFQQLSDGQTLPIPPILLAELGSDPKKPTVCFYGHLDVQPARQEDGWLTDPYTLTEVDGKLYGRGTTDNKGPVLAWINAVSAFKALDEDLPVNIKFLIEGMEESGSLALEELVRKEKSGFFSSVDCIVISDNLWISRRKPALIYGTRGNSYFTVEVKCRDQDFHSGTFGGILNEPMADLVALLGSLVDASGRILVPGIYGHVAPVTEEEKRVYEAIDLDMEEYRNSSQVKKFLFDTKEELLMHLWRYPSLSIHGIEGAFHEPGAKTVIPGRVIGKFSIRLVPHMDMSVVETQVKQHLEYIFSKRNSSNQMTVSMALGLHPWIANISDHQYLAAKRAIKTVFGTEPDMIRDGSTIPIAKILQDTTQKSVIMLPLGAVDDGEHSQNEKINRWNYIEGSKLFAAFFLEMAKLHSS
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(4166123,4166251..4166322,4166507..4166654,4173244..4173385,4175355..4175519,4176761..4176921,4181058..4181142,4182334..4182534,4186470..4186558,4187205..4187367,4188535..4188684,4190148..4190300))
location: region:4166123-4190300:-1
so has part: feature:4190148-4190300:-1:exon
so has part: feature:4188535-4188684:-1:exon
so has part: feature:4187205-4187367:-1:exon
so has part: feature:4186470-4186558:-1:exon
so has part: feature:4182334-4182534:-1:exon
so has part: feature:4181058-4181142:-1:exon
so has part: feature:4176761-4176921:-1:exon
so has part: feature:4175355-4175519:-1:exon
so has part: feature:4173244-4173385:-1:exon
so has part: feature:4166507-4166654:-1:exon
so has part: feature:4166251-4166322:-1:exon
so has part: feature:4166123-4166123:-1:exon

XP_027381902.1
type: Protein
SIO_000068: ncbiprotein

position:4190300:-1
position: 4190300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4190148-4190300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4188535-4188684:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4187205-4187367:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4186470-4186558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4182334-4182534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4181058-4181142:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4176761-4176921:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4175355-4175519:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4173244-4173385:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4166507-4166654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4166251-4166322:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4166123-4166123:-1:exon

CNDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CNDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-Ala-His dipeptidase isoform X1
translation: MAPAVAHSQAESLLAFRLLLVGGMFSASTPPPGPLEKVFQYIDLHQDEFVQTLKEWVAVESDSVQPVPRLRRELLRMAGLAADRLRGLGARVASVDAGFQQLSDGQTLPIPPILLAELGSDPKKPTVCFYGHLDVQPARQEDGWLTDPYTLTEVDGKLYGRGTTDNKGPVLAWINAVSAFKALDEDLPVNIKFLIEGMEESGSLALEELVRKEKSGFFSSVDCIVISDNLWISRRKPALIYGTRGNSYFTVEVKCRDQDFHSGTFGGILNEPMADLVALLGSLVDASGRILVPGIYGHVAPVTEEEKRVYEAIDLDMEEYRNSSQVKKFLFDTKEELLMHLWRYPSLSIHGIEGAFHEPGAKTVIPGRVIGKFSIRLVPHMDMSVVETQVKQHLEYIFSKRNSSNQMTVSMALGLHPWIANISDHQYLAAKRAIKTVFGTEPDMIRDGSTIPIAKILQDTTQKSVIMLPLGAVDDGEHSQNEKINRWNYIEGSKLFAAFFLEMAKLHSSW
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(4166247..4166322,4166507..4166654,4173244..4173385,4175355..4175519,4176761..4176921,4181058..4181142,4182334..4182534,4186470..4186558,4187205..4187367,4188535..4188684,4190148..4190300))
location: region:4166247-4190300:-1
so has part: feature:4190148-4190300:-1:exon
so has part: feature:4188535-4188684:-1:exon
so has part: feature:4187205-4187367:-1:exon
so has part: feature:4186470-4186558:-1:exon
so has part: feature:4182334-4182534:-1:exon
so has part: feature:4181058-4181142:-1:exon
so has part: feature:4176761-4176921:-1:exon
so has part: feature:4175355-4175519:-1:exon
so has part: feature:4173244-4173385:-1:exon
so has part: feature:4166507-4166654:-1:exon
so has part: feature:4166247-4166322:-1:exon

XP_027381901.1
type: Protein
SIO_000068: ncbiprotein

position:4166247:-1
position: 4166247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4190148-4190300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4188535-4188684:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4187205-4187367:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4186470-4186558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4182334-4182534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4181058-4181142:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4176761-4176921:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4175355-4175519:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4173244-4173385:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4166507-4166654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4166247-4166322:-1:exon

CNDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CNDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-Ala-His dipeptidase isoform X3
translation: MFSASTPPPGPLEKVFQYIDLHQDEFVQTLKEWVAVESDSVQPVPRLRRELLRMAGLAADRLRGLGARVASVDAGFQQLSDGQTLPIPPILLAELGSDPKKPTVCFYGHLDVQPARQEDGWLTDPYTLTEVDGKLYGRGTTDNKGPVLAWINAVSAFKALDEDLPVNIKFLIEGMEESGSLALEELVRKEKSGFFSSVDCIVISDNLWISRRKPALIYGTRGNSYFTVEVKCRDQDFHSGTFGGILNEPMADLVALLGSLVDASGRILVPGIYGHVAPVTEEEKRVYEAIDLDMEEYRNSSQVKKFLFDTKEELLMHLWRYPSLSIHGIEGAFHEPGAKTVIPGRVIGKFSIRLVPHMDMSVVETQVKQHLEYIFSKRNSSNQMTVSMALGLHPWIANISDHQYLAAKRAIKTVFGTEPDMIRDGSTIPIAKILQDTTQKSVIMLPLGAVDDGEHSQNEKINRWNYIEGSKLFAAFFLEMAKLHSSW
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(4166247..4166322,4166507..4166654,4173244..4173385,4175355..4175519,4176761..4176921,4181058..4181142,4182334..4182534,4186470..4186558,4187205..4187367,4188535..4188684,4190148..4190231))
location: region:4166247-4190231:-1
so has part: feature:4190148-4190231:-1:exon
so has part: feature:4188535-4188684:-1:exon
so has part: feature:4187205-4187367:-1:exon
so has part: feature:4186470-4186558:-1:exon
so has part: feature:4182334-4182534:-1:exon
so has part: feature:4181058-4181142:-1:exon
so has part: feature:4176761-4176921:-1:exon
so has part: feature:4175355-4175519:-1:exon
so has part: feature:4173244-4173385:-1:exon
so has part: feature:4166507-4166654:-1:exon
so has part: feature:4166247-4166322:-1:exon

XP_027381903.1
type: Protein
SIO_000068: ncbiprotein

position:4190231:-1
position: 4190231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4190148-4190231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4188535-4188684:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4187205-4187367:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4186470-4186558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4182334-4182534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4181058-4181142:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4176761-4176921:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4175355-4175519:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4173244-4173385:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4166507-4166654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4166247-4166322:-1:exon

CNDP2
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: CNDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4202725..4216596)
location: region:4202725-4216596:-1
so has part: feature:4202725-4216596:-1:exon
subclass of: SO_0000010

113882703
type: Gene
SIO_000068: ncbigene

position:4202725:-1
position: 4202725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4216596:-1
position: 4216596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4202725-4216596:-1:exon

CNDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CNDP2
product: carnosine dipeptidase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 224 ESTs, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 201 samples with support for all annotated introns
transcript id: XM_027525781.1
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(4202725..4203269,4203632..4203779,4203954..4204095,4205336..4205500,4206250..4206410,4207088..4207172,4207371..4207571,4208962..4209050,4209794..4209956,4212053..4212196,4213285..4213365,4216509..4216596))
location: region:4202725-4216596:-1
so has part: feature:4216509-4216596:-1:exon
so has part: feature:4213285-4213365:-1:exon
so has part: feature:4212053-4212196:-1:exon
so has part: feature:4209794-4209956:-1:exon
so has part: feature:4208962-4209050:-1:exon
so has part: feature:4207371-4207571:-1:exon
so has part: feature:4207088-4207172:-1:exon
so has part: feature:4206250-4206410:-1:exon
so has part: feature:4205336-4205500:-1:exon
so has part: feature:4203954-4204095:-1:exon
so has part: feature:4203632-4203779:-1:exon
so has part: feature:4202725-4203269:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4216509-4216596:-1:exon

position:4216509:-1
position: 4216509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4213285-4213365:-1:exon

position:4213285:-1
position: 4213285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4213365:-1
position: 4213365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4212053-4212196:-1:exon

position:4212053:-1
position: 4212053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4212196:-1
position: 4212196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4209794-4209956:-1:exon

position:4209794:-1
position: 4209794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4209956:-1
position: 4209956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4208962-4209050:-1:exon

position:4208962:-1
position: 4208962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4209050:-1
position: 4209050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4207371-4207571:-1:exon

position:4207371:-1
position: 4207371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4207571:-1
position: 4207571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4207088-4207172:-1:exon

position:4207088:-1
position: 4207088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4207172:-1
position: 4207172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4206250-4206410:-1:exon

position:4206250:-1
position: 4206250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4206410:-1
position: 4206410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4205336-4205500:-1:exon

position:4205336:-1
position: 4205336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4205500:-1
position: 4205500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4203954-4204095:-1:exon

position:4203954:-1
position: 4203954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4204095:-1
position: 4204095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4203632-4203779:-1:exon

position:4203632:-1
position: 4203632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4203779:-1
position: 4203779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4202725-4203269:-1:exon

position:4203269:-1
position: 4203269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CNDP2
product: carnosine dipeptidase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 205 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 165 samples with support for all annotated introns
transcript id: XM_027525780.1
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(4202725..4203269,4203632..4203779,4203954..4204095,4205336..4205500,4206250..4206410,4207088..4207172,4207371..4207571,4208962..4209050,4209794..4209956,4212053..4212196,4213285..4213372,4216509..4216577))
location: region:4202725-4216577:-1
so has part: feature:4216509-4216577:-1:exon
so has part: feature:4213285-4213372:-1:exon
so has part: feature:4212053-4212196:-1:exon
so has part: feature:4209794-4209956:-1:exon
so has part: feature:4208962-4209050:-1:exon
so has part: feature:4207371-4207571:-1:exon
so has part: feature:4207088-4207172:-1:exon
so has part: feature:4206250-4206410:-1:exon
so has part: feature:4205336-4205500:-1:exon
so has part: feature:4203954-4204095:-1:exon
so has part: feature:4203632-4203779:-1:exon
so has part: feature:4202725-4203269:-1:exon

position:4216577:-1
position: 4216577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4216509-4216577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4213285-4213372:-1:exon

position:4213372:-1
position: 4213372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4212053-4212196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4209794-4209956:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4208962-4209050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4207371-4207571:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4207088-4207172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4206250-4206410:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4205336-4205500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4203954-4204095:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4203632-4203779:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4202725-4203269:-1:exon

CNDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CNDP2
product: carnosine dipeptidase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 203 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 146 samples with support for all annotated introns
transcript id: XM_027525782.1
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(4202725..4203269,4203632..4203779,4203954..4204095,4205336..4205500,4206250..4206410,4207088..4207172,4207371..4207571,4208962..4209050,4209794..4209956,4212053..4212196,4213285..4213365,4216194..4216483))
location: region:4202725-4216483:-1
so has part: feature:4216194-4216483:-1:exon
so has part: feature:4213285-4213365:-1:exon
so has part: feature:4212053-4212196:-1:exon
so has part: feature:4209794-4209956:-1:exon
so has part: feature:4208962-4209050:-1:exon
so has part: feature:4207371-4207571:-1:exon
so has part: feature:4207088-4207172:-1:exon
so has part: feature:4206250-4206410:-1:exon
so has part: feature:4205336-4205500:-1:exon
so has part: feature:4203954-4204095:-1:exon
so has part: feature:4203632-4203779:-1:exon
so has part: feature:4202725-4203269:-1:exon

position:4216483:-1
position: 4216483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4216194-4216483:-1:exon

position:4216194:-1
position: 4216194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4213285-4213365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4212053-4212196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4209794-4209956:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4208962-4209050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4207371-4207571:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4207088-4207172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4206250-4206410:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4205336-4205500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4203954-4204095:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4203632-4203779:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4202725-4203269:-1:exon

CNDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CNDP2
product: carnosine dipeptidase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 253 ESTs, 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 218 samples with support for all annotated introns
transcript id: XM_027525779.1
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(4202725..4203269,4203632..4203779,4203954..4204095,4205336..4205500,4206250..4206410,4207088..4207172,4207371..4207571,4208962..4209050,4209794..4209956,4212053..4212196,4213285..4214105))
location: region:4202725-4214105:-1
so has part: feature:4213285-4214105:-1:exon
so has part: feature:4212053-4212196:-1:exon
so has part: feature:4209794-4209956:-1:exon
so has part: feature:4208962-4209050:-1:exon
so has part: feature:4207371-4207571:-1:exon
so has part: feature:4207088-4207172:-1:exon
so has part: feature:4206250-4206410:-1:exon
so has part: feature:4205336-4205500:-1:exon
so has part: feature:4203954-4204095:-1:exon
so has part: feature:4203632-4203779:-1:exon
so has part: feature:4202725-4203269:-1:exon

position:4214105:-1
position: 4214105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4213285-4214105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4212053-4212196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4209794-4209956:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4208962-4209050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4207371-4207571:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4207088-4207172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4206250-4206410:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4205336-4205500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4203954-4204095:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4203632-4203779:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4202725-4203269:-1:exon

CNDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CNDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic non-specific dipeptidase
translation: MSALTTLFKYVDENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADIKQLGGSVQLVDIGTQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDGKLFGRGATDDKGPVAGWINALEAFQKTKQEVPVNVRFCLEGMEESGSEGLDALIFAQKDAFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLIMLMGCLMDKKGKILIPGISEAVAPVTEEELELYDKIDFDLEEYARDVGAGTLLHGCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVSEQVTSYLTKKFAELHSPNKFKVYMGHGGKPWVSDFNHPHYLAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRRNYIEGTKMLAAYLYEVSQLKD
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(4203200..4203269,4203632..4203779,4203954..4204095,4205336..4205500,4206250..4206410,4207088..4207172,4207371..4207571,4208962..4209050,4209794..4209956,4212053..4212196,4213285..4213344))
location: region:4203200-4213344:-1
so has part: feature:4213285-4213344:-1:exon
so has part: feature:4212053-4212196:-1:exon
so has part: feature:4209794-4209956:-1:exon
so has part: feature:4208962-4209050:-1:exon
so has part: feature:4207371-4207571:-1:exon
so has part: feature:4207088-4207172:-1:exon
so has part: feature:4206250-4206410:-1:exon
so has part: feature:4205336-4205500:-1:exon
so has part: feature:4203954-4204095:-1:exon
so has part: feature:4203632-4203779:-1:exon
so has part: feature:4203200-4203269:-1:exon

XP_027381580.1
type: Protein
SIO_000068: ncbiprotein

position:4203200:-1
position: 4203200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4213344:-1
position: 4213344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4213285-4213344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4212053-4212196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4209794-4209956:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4208962-4209050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4207371-4207571:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4207088-4207172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4206250-4206410:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4205336-4205500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4203954-4204095:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4203632-4203779:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4203200-4203269:-1:exon

CNDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CNDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic non-specific dipeptidase
translation: MSALTTLFKYVDENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADIKQLGGSVQLVDIGTQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDGKLFGRGATDDKGPVAGWINALEAFQKTKQEVPVNVRFCLEGMEESGSEGLDALIFAQKDAFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLIMLMGCLMDKKGKILIPGISEAVAPVTEEELELYDKIDFDLEEYARDVGAGTLLHGCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVSEQVTSYLTKKFAELHSPNKFKVYMGHGGKPWVSDFNHPHYLAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRRNYIEGTKMLAAYLYEVSQLKD
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(4203200..4203269,4203632..4203779,4203954..4204095,4205336..4205500,4206250..4206410,4207088..4207172,4207371..4207571,4208962..4209050,4209794..4209956,4212053..4212196,4213285..4213344))
location: region:4203200-4213344:-1
so has part: feature:4213285-4213344:-1:exon
so has part: feature:4212053-4212196:-1:exon
so has part: feature:4209794-4209956:-1:exon
so has part: feature:4208962-4209050:-1:exon
so has part: feature:4207371-4207571:-1:exon
so has part: feature:4207088-4207172:-1:exon
so has part: feature:4206250-4206410:-1:exon
so has part: feature:4205336-4205500:-1:exon
so has part: feature:4203954-4204095:-1:exon
so has part: feature:4203632-4203779:-1:exon
so has part: feature:4203200-4203269:-1:exon

XP_027381581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4213285-4213344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4212053-4212196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4209794-4209956:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4208962-4209050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4207371-4207571:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4207088-4207172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4206250-4206410:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4205336-4205500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4203954-4204095:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4203632-4203779:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4203200-4203269:-1:exon

CNDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CNDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic non-specific dipeptidase
translation: MSALTTLFKYVDENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADIKQLGGSVQLVDIGTQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDGKLFGRGATDDKGPVAGWINALEAFQKTKQEVPVNVRFCLEGMEESGSEGLDALIFAQKDAFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLIMLMGCLMDKKGKILIPGISEAVAPVTEEELELYDKIDFDLEEYARDVGAGTLLHGCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVSEQVTSYLTKKFAELHSPNKFKVYMGHGGKPWVSDFNHPHYLAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRRNYIEGTKMLAAYLYEVSQLKD
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(4203200..4203269,4203632..4203779,4203954..4204095,4205336..4205500,4206250..4206410,4207088..4207172,4207371..4207571,4208962..4209050,4209794..4209956,4212053..4212196,4213285..4213344))
location: region:4203200-4213344:-1
so has part: feature:4213285-4213344:-1:exon
so has part: feature:4212053-4212196:-1:exon
so has part: feature:4209794-4209956:-1:exon
so has part: feature:4208962-4209050:-1:exon
so has part: feature:4207371-4207571:-1:exon
so has part: feature:4207088-4207172:-1:exon
so has part: feature:4206250-4206410:-1:exon
so has part: feature:4205336-4205500:-1:exon
so has part: feature:4203954-4204095:-1:exon
so has part: feature:4203632-4203779:-1:exon
so has part: feature:4203200-4203269:-1:exon

XP_027381582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4213285-4213344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4212053-4212196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4209794-4209956:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4208962-4209050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4207371-4207571:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4207088-4207172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4206250-4206410:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4205336-4205500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4203954-4204095:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4203632-4203779:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4203200-4203269:-1:exon

CNDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CNDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic non-specific dipeptidase
translation: MSALTTLFKYVDENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADIKQLGGSVQLVDIGTQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDGKLFGRGATDDKGPVAGWINALEAFQKTKQEVPVNVRFCLEGMEESGSEGLDALIFAQKDAFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLIMLMGCLMDKKGKILIPGISEAVAPVTEEELELYDKIDFDLEEYARDVGAGTLLHGCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVSEQVTSYLTKKFAELHSPNKFKVYMGHGGKPWVSDFNHPHYLAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRRNYIEGTKMLAAYLYEVSQLKD
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(4203200..4203269,4203632..4203779,4203954..4204095,4205336..4205500,4206250..4206410,4207088..4207172,4207371..4207571,4208962..4209050,4209794..4209956,4212053..4212196,4213285..4213344))
location: region:4203200-4213344:-1
so has part: feature:4213285-4213344:-1:exon
so has part: feature:4212053-4212196:-1:exon
so has part: feature:4209794-4209956:-1:exon
so has part: feature:4208962-4209050:-1:exon
so has part: feature:4207371-4207571:-1:exon
so has part: feature:4207088-4207172:-1:exon
so has part: feature:4206250-4206410:-1:exon
so has part: feature:4205336-4205500:-1:exon
so has part: feature:4203954-4204095:-1:exon
so has part: feature:4203632-4203779:-1:exon
so has part: feature:4203200-4203269:-1:exon

XP_027381583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4213285-4213344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4212053-4212196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4209794-4209956:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4208962-4209050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4207371-4207571:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4207088-4207172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4206250-4206410:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4205336-4205500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4203954-4204095:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4203632-4203779:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4203200-4203269:-1:exon

LOC113882801
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882801
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4223353..4241963)
location: region:4223353-4241963:-1
so has part: feature:4223353-4241963:-1:exon
subclass of: SO_0000011

113882801
type: Gene
SIO_000068: ncbigene

position:4223353:-1
position: 4223353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4241963:-1
position: 4241963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4223353-4241963:-1:exon

LOC113882801
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882801
product: uncharacterized LOC113882801, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_003508448.1
SIO_010081: LOC113882801
subclass of: SO_0000673
so part of: LOC113882801
location: complement(join(4223353..4224134,4225233..4225418,4226068..4226113,4241628..4241963))
location: region:4223353-4241963:-1
so has part: feature:4241628-4241963:-1:exon
so has part: feature:4226068-4226113:-1:exon
so has part: feature:4225233-4225418:-1:exon
so has part: feature:4223353-4224134:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4241628-4241963:-1:exon

position:4241628:-1
position: 4241628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4226068-4226113:-1:exon

position:4226068:-1
position: 4226068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4226113:-1
position: 4226113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4225233-4225418:-1:exon

position:4225233:-1
position: 4225233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4225418:-1
position: 4225418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4223353-4224134:-1:exon

position:4224134:-1
position: 4224134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113882801
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882801
product: uncharacterized LOC113882801, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_003508449.1
SIO_010081: LOC113882801
subclass of: SO_0000673
so part of: LOC113882801
location: complement(join(4223353..4224134,4225233..4225418,4226068..4228670,4241628..4241963))
location: region:4223353-4241963:-1
so has part: feature:4241628-4241963:-1:exon
so has part: feature:4226068-4228670:-1:exon
so has part: feature:4225233-4225418:-1:exon
so has part: feature:4223353-4224134:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4241628-4241963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4226068-4228670:-1:exon

position:4228670:-1
position: 4228670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4225233-4225418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4223353-4224134:-1:exon

DIPK1C
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: DIPK1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4243422..4261019
location: region:4243422-4261019:1
so has part: feature:4243422-4261019:1:exon
subclass of: SO_0000010

113882596
type: Gene
SIO_000068: ncbigene

position:4243422:1
position: 4243422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4261019:1
position: 4261019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4243422-4261019:1:exon

DIPK1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: DIPK1C
product: divergent protein kinase domain 1C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_027525520.1
SIO_010081: DIPK1C
subclass of: SO_0000673
so part of: DIPK1C
location: join(4243422..4243625,4252753..4253424,4256627..4256791,4260370..4261019)
location: region:4243422-4261019:1
so has part: feature:4243422-4243625:1:exon
so has part: feature:4252753-4253424:1:exon
so has part: feature:4256627-4256791:1:exon
so has part: feature:4260370-4261019:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4243422-4243625:1:exon

position:4243625:1
position: 4243625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4252753-4253424:1:exon

position:4252753:1
position: 4252753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4253424:1
position: 4253424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4256627-4256791:1:exon

position:4256627:1
position: 4256627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4256791:1
position: 4256791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4260370-4261019:1:exon

position:4260370:1
position: 4260370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DIPK1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: DIPK1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM69C
translation: MARARAAGARGRPGRCGLGGRCGRRALLACAAWTAGWVLAAALLLRAHPGVPSERCTDEKSRRILAALCQDYRGGALGGDLCEDLCEAGQLRYRRCLYYERGKKVLQADWRGRPVVLKSKEEAFSSFPPLGLLDGQPEAGGQDLPEAELLVLAAGEARSALGLEPAEGGLGRLELVRRGPPRRGQLASLWALLQQEEFVLLSLLRGRSPHAPPVLGSCGHFYALEHLAAGSPGHRALFPLGPDGGRRGQARAVSGVALSFLDMVRHFDHDFAHRLHLCDVKPENFAIRNDFTVVAIDVDMAFFEPKMREILEQNCTRDEDCNFFDCFSKCDLRAHRCGAQRANSNLQVVCDKIFRHWFSSSRGSSAVSSPLRGQLRAAVQECAAPGAQGAPRVLGRLRSLLQAVLRELRDGEELRPGARSHPRGDSHHGTPGAARKAPAGLSHHPFE
SIO_010081: DIPK1C
subclass of: SO_0000673
so part of: DIPK1C
location: join(4243422..4243625,4252753..4253424,4256627..4256791,4260370..4260672)
location: region:4243422-4260672:1
so has part: feature:4243422-4243625:1:exon
so has part: feature:4252753-4253424:1:exon
so has part: feature:4256627-4256791:1:exon
so has part: feature:4260370-4260672:1:exon

XP_027381321.1
type: Protein
SIO_000068: ncbiprotein

position:4260672:1
position: 4260672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4243422-4243625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4252753-4253424:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4256627-4256791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4260370-4260672:1:exon

C24H18orf63
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: C24H18orf63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4289126..4329043)
location: region:4289126-4329043:-1
so has part: feature:4289126-4329043:-1:exon
subclass of: SO_0000010

113882597
type: Gene
SIO_000068: ncbigene

position:4289126:-1
position: 4289126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4329043:-1
position: 4329043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4289126-4329043:-1:exon

C24H18orf63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: C24H18orf63
product: chromosome 24 C18orf63 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 25% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_027525521.1
SIO_010081: C24H18orf63
subclass of: SO_0000673
so part of: C24H18orf63
location: complement(join(4289126..4289199,4295250..4295442,4305239..4306237,4312092..4312275,4313187..4313272,4313452..4313548,4314443..4314552,4317064..4317140,4319488..4319529,4320244..4320355,4323625..4323681,4326573..4326651,4328902..4329043))
location: region:4289126-4329043:-1
so has part: feature:4328902-4329043:-1:exon
so has part: feature:4326573-4326651:-1:exon
so has part: feature:4323625-4323681:-1:exon
so has part: feature:4320244-4320355:-1:exon
so has part: feature:4319488-4319529:-1:exon
so has part: feature:4317064-4317140:-1:exon
so has part: feature:4314443-4314552:-1:exon
so has part: feature:4313452-4313548:-1:exon
so has part: feature:4313187-4313272:-1:exon
so has part: feature:4312092-4312275:-1:exon
so has part: feature:4305239-4306237:-1:exon
so has part: feature:4295250-4295442:-1:exon
so has part: feature:4289126-4289199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4328902-4329043:-1:exon

position:4328902:-1
position: 4328902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4326573-4326651:-1:exon

position:4326573:-1
position: 4326573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4326651:-1
position: 4326651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4323625-4323681:-1:exon

position:4323625:-1
position: 4323625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4323681:-1
position: 4323681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4320244-4320355:-1:exon

position:4320244:-1
position: 4320244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4320355:-1
position: 4320355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4319488-4319529:-1:exon

position:4319488:-1
position: 4319488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4319529:-1
position: 4319529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4317064-4317140:-1:exon

position:4317064:-1
position: 4317064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4317140:-1
position: 4317140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4314443-4314552:-1:exon

position:4314443:-1
position: 4314443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4314552:-1
position: 4314552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4313452-4313548:-1:exon

position:4313452:-1
position: 4313452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4313548:-1
position: 4313548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4313187-4313272:-1:exon

position:4313187:-1
position: 4313187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4313272:-1
position: 4313272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4312092-4312275:-1:exon

position:4312092:-1
position: 4312092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4312275:-1
position: 4312275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4305239-4306237:-1:exon

position:4305239:-1
position: 4305239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4306237:-1
position: 4306237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4295250-4295442:-1:exon

position:4295250:-1
position: 4295250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4295442:-1
position: 4295442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4289126-4289199:-1:exon

position:4289199:-1
position: 4289199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C24H18orf63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: C24H18orf63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C18orf63 homolog
translation: MNDSKQQSLFFITLPDLHKLCAVKIILSNGVAGTEIRSRQMKICRQLLFLHQDILTSPVPGIFTQIWAVMAITFYKAGKLNAYMEKYGAKVEAPQQVIPIILQNCLSYSLTARLAPAWNKAGHLLIQGREFLSQMGKQSAVVLDINVTSTQVCLSIEVHTVRLPPPQLREFDISQSIIKSFETNQNAVIEEQSILSNWCYVLPSMKMGRLISILHTIPPDCPFHSYEDFQMHWDGLYGYKLPEDLGTIKIYCCIYFKMIGERLFTYPLSCVRSQPIQFFPRVDMEGVLRSFLSDLKSKLPHICGFPIKMTTKPCYYTQELTTLHLQGNKVKPPNLTAQAKSSPAHTPSTRAARAPSFPPCSAAAGHKGARSVSPPKPSGSSALRLQPESVLSSKKAPSDQAAQVLEVPKPTRGNAQDTNFSSQHNIAPRFIPVFKSRPLQMTKSILAPENLRRKRVDTESKLFSLKSSEIQDDKPNLDPTTKKRPSHSIQMKAKNLNLKTCRSLQEKNTESYGNMTKNPLSSGKSLITSLSESKQLSNSSVFQMPTSNLDVLKSAVGSQVNGKENLTSKYITQVLGKSHESLKVKRQPHIFESDTDPEDSQPLQPQSVDQTKEADVTDHQLTVSRTAPKSKKLCQDSLKTSKKPHSNTVLCGQSRARKQALPNPPPRKHERGSARQRHTRQLSAREDEETGEPWSLRGSPSNSELRNCRFKQLKPQELMSFLKGLQTFAQPQISGRILKKRCYFHLL
SIO_010081: C24H18orf63
subclass of: SO_0000673
so part of: C24H18orf63
location: complement(join(4289126..4289199,4295250..4295442,4305239..4306237,4312092..4312275,4313187..4313272,4313452..4313548,4314443..4314552,4317064..4317140,4319488..4319529,4320244..4320355,4323625..4323681,4326573..4326651,4328902..4329035))
location: region:4289126-4329035:-1
so has part: feature:4328902-4329035:-1:exon
so has part: feature:4326573-4326651:-1:exon
so has part: feature:4323625-4323681:-1:exon
so has part: feature:4320244-4320355:-1:exon
so has part: feature:4319488-4319529:-1:exon
so has part: feature:4317064-4317140:-1:exon
so has part: feature:4314443-4314552:-1:exon
so has part: feature:4313452-4313548:-1:exon
so has part: feature:4313187-4313272:-1:exon
so has part: feature:4312092-4312275:-1:exon
so has part: feature:4305239-4306237:-1:exon
so has part: feature:4295250-4295442:-1:exon
so has part: feature:4289126-4289199:-1:exon

XP_027381322.1
type: Protein
SIO_000068: ncbiprotein

position:4329035:-1
position: 4329035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4328902-4329035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4326573-4326651:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4323625-4323681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4320244-4320355:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4319488-4319529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4317064-4317140:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4314443-4314552:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4313452-4313548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4313187-4313272:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4312092-4312275:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4305239-4306237:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4295250-4295442:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4289126-4289199:-1:exon

LOC113882655
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4342807..4376970
location: region:4342807-4376970:1
so has part: feature:4342807-4376970:1:exon
subclass of: SO_0000010

113882655
type: Gene
SIO_000068: ncbigene

position:4342807:1
position: 4342807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4376970:1
position: 4376970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4342807-4376970:1:exon

LOC113882655
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113882655
product: cytochrome b5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 134 ESTs, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 218 samples with support for all annotated introns
transcript id: XM_027525621.1
SIO_010081: LOC113882655
subclass of: SO_0000673
so part of: LOC113882655
location: join(4342807..4343069,4367314..4367442,4369525..4369554,4373378..4373412,4375281..4376970)
location: region:4342807-4376970:1
so has part: feature:4342807-4343069:1:exon
so has part: feature:4367314-4367442:1:exon
so has part: feature:4369525-4369554:1:exon
so has part: feature:4373378-4373412:1:exon
so has part: feature:4375281-4376970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4342807-4343069:1:exon

position:4343069:1
position: 4343069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4367314-4367442:1:exon

position:4367314:1
position: 4367314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4367442:1
position: 4367442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4369525-4369554:1:exon

position:4369525:1
position: 4369525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4369554:1
position: 4369554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4373378-4373412:1:exon

position:4373378:1
position: 4373378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4373412:1
position: 4373412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4375281-4376970:1:exon

position:4375281:1
position: 4375281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113882655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113882655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b5
translation: MAEESSKAVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDDRSKITKPSESIITTIDSNPSWWTNWLIPAISALFVALIYHLYTSEN
SIO_010081: LOC113882655
subclass of: SO_0000673
so part of: LOC113882655
location: join(4342941..4343069,4367314..4367442,4369525..4369554,4373378..4373412,4375281..4375362)
location: region:4342941-4375362:1
so has part: feature:4342941-4343069:1:exon
so has part: feature:4367314-4367442:1:exon
so has part: feature:4369525-4369554:1:exon
so has part: feature:4373378-4373412:1:exon
so has part: feature:4375281-4375362:1:exon

XP_027381422.1
type: Protein
SIO_000068: ncbiprotein

position:4342941:1
position: 4342941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4375362:1
position: 4375362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4342941-4343069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4367314-4367442:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4369525-4369554:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4373378-4373412:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4375281-4375362:1:exon

LOC113882919
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4430088..4434299)
location: region:4430088-4434299:-1
so has part: feature:4430088-4434299:-1:exon
subclass of: SO_0000011

113882919
type: Gene
SIO_000068: ncbigene

position:4430088:-1
position: 4430088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4434299:-1
position: 4434299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4430088-4434299:-1:exon

LOC113882919
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882919
product: uncharacterized LOC113882919
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_003508487.1
SIO_010081: LOC113882919
subclass of: SO_0000673
so part of: LOC113882919
location: complement(join(4430088..4431450,4434159..4434299))
location: region:4430088-4434299:-1
so has part: feature:4434159-4434299:-1:exon
so has part: feature:4430088-4431450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4434159-4434299:-1:exon

position:4434159:-1
position: 4434159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4430088-4431450:-1:exon

position:4431450:-1
position: 4431450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TIMM21
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TIMM21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4439124..4445094)
location: region:4439124-4445094:-1
so has part: feature:4439124-4445094:-1:exon
subclass of: SO_0000010

113882668
type: Gene
SIO_000068: ncbigene

position:4439124:-1
position: 4439124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4445094:-1
position: 4445094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4439124-4445094:-1:exon

TIMM21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TIMM21
product: translocase of inner mitochondrial membrane 21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 88 ESTs, 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 206 samples with support for all annotated introns
transcript id: XM_027525646.1
SIO_010081: TIMM21
subclass of: SO_0000673
so part of: TIMM21
location: complement(join(4439124..4439541,4439647..4439752,4439840..4439913,4442158..4442255,4442354..4442416,4444250..4445094))
location: region:4439124-4445094:-1
so has part: feature:4444250-4445094:-1:exon
so has part: feature:4442354-4442416:-1:exon
so has part: feature:4442158-4442255:-1:exon
so has part: feature:4439840-4439913:-1:exon
so has part: feature:4439647-4439752:-1:exon
so has part: feature:4439124-4439541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4444250-4445094:-1:exon

position:4444250:-1
position: 4444250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4442354-4442416:-1:exon

position:4442354:-1
position: 4442354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4442416:-1
position: 4442416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4442158-4442255:-1:exon

position:4442158:-1
position: 4442158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4442255:-1
position: 4442255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4439840-4439913:-1:exon

position:4439840:-1
position: 4439840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4439913:-1
position: 4439913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4439647-4439752:-1:exon

position:4439647:-1
position: 4439647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4439752:-1
position: 4439752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4439124-4439541:-1:exon

position:4439541:-1
position: 4439541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TIMM21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TIMM21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit Tim21
translation: MICTLLRAVRCTERLHGCPGKPWFLPHSVPHRACSQTEPRWRWGLQEQNTTARPRCIWGVTQRSIWTQVRSPQSAKEDGSKQVSVHRSQGGETVLSTSQKVKEAGRDFTYLIVVLIGISITGGLFYTIFRELFSSSSPNKIYGKALEKCRSHPEVISVFGEPVKGYGEVTRRGRRQHVSFIEYKKDGLKHMRVKFYIQGWEPGKQGTVHLEVKENPESGEYEFRYIFVELEPYSRTIVVEDNRS
SIO_010081: TIMM21
subclass of: SO_0000673
so part of: TIMM21
location: complement(join(4439449..4439541,4439647..4439752,4439840..4439913,4442158..4442255,4442354..4442416,4444250..4444550))
location: region:4439449-4444550:-1
so has part: feature:4444250-4444550:-1:exon
so has part: feature:4442354-4442416:-1:exon
so has part: feature:4442158-4442255:-1:exon
so has part: feature:4439840-4439913:-1:exon
so has part: feature:4439647-4439752:-1:exon
so has part: feature:4439449-4439541:-1:exon

XP_027381447.1
type: Protein
SIO_000068: ncbiprotein

position:4439449:-1
position: 4439449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4444550:-1
position: 4444550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4444250-4444550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4442354-4442416:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4442158-4442255:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4439840-4439913:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4439647-4439752:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4439449-4439541:-1:exon

FBXO15
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: FBXO15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4445054..4482381
location: region:4445054-4482381:1
so has part: feature:4445054-4482381:1:exon
subclass of: SO_0000010

113882667
type: Gene
SIO_000068: ncbigene

position:4445054:1
position: 4445054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4482381:1
position: 4482381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4445054-4482381:1:exon

FBXO15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: FBXO15
product: F-box protein 15, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 ESTs, 1 long SRA read, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_027525643.1
SIO_010081: FBXO15
subclass of: SO_0000673
so part of: FBXO15
location: join(4445054..4445652,4452275..4452385,4454184..4454288,4458181..4458423,4458847..4459056,4462563..4462689,4463749..4463831,4464767..4464909,4480709..4480833,4481985..4482381)
location: region:4445054-4482381:1
so has part: feature:4445054-4445652:1:exon
so has part: feature:4452275-4452385:1:exon
so has part: feature:4454184-4454288:1:exon
so has part: feature:4458181-4458423:1:exon
so has part: feature:4458847-4459056:1:exon
so has part: feature:4462563-4462689:1:exon
so has part: feature:4463749-4463831:1:exon
so has part: feature:4464767-4464909:1:exon
so has part: feature:4480709-4480833:1:exon
so has part: feature:4481985-4482381:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4445054-4445652:1:exon

position:4445652:1
position: 4445652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4452275-4452385:1:exon

position:4452275:1
position: 4452275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4452385:1
position: 4452385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4454184-4454288:1:exon

position:4454184:1
position: 4454184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4454288:1
position: 4454288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4458181-4458423:1:exon

position:4458181:1
position: 4458181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4458423:1
position: 4458423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4458847-4459056:1:exon

position:4458847:1
position: 4458847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4459056:1
position: 4459056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4462563-4462689:1:exon

position:4462563:1
position: 4462563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4462689:1
position: 4462689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4463749-4463831:1:exon

position:4463749:1
position: 4463749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4463831:1
position: 4463831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4464767-4464909:1:exon

position:4464767:1
position: 4464767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4464909:1
position: 4464909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4480709-4480833:1:exon

position:4480709:1
position: 4480709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4480833:1
position: 4480833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4481985-4482381:1:exon

position:4481985:1
position: 4481985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXO15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: FBXO15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 15 isoform X1
translation: MAIGRGRLLQLQWQCLLARPPPLGCFGSAFASPGAAAGRAGFRMRPGAMLPAGPAALSRRARQDKVCRRPSTGCSASLDSLPSEVLLKILSYLDAAALLCAGCVNRRFYHLANDNFIWIRIYSTAFSPRRSHWRVDPAEKTDLSVNLLSAGDKEAGYWKKEYLTKQIASVKAALARVLKPLHPHTGLPVKTKEALRVSGLGWVIILRAADGREYTMEHADLSVNDSSVTVIWYGKDWPPLATLSTLDLCGVTPVFMGQSRTPSRIRPRWHSLITKYQLSQLTESSAVGGDRLMRVFCLPPGLVVGLWKREEELAFVMANLHLYCLVERSMLGSPAVPYELPPHTPVSDDSPERGLHGYRLHVDMHSGGASCLCGSFHNLSASKGYLENEYMKLTVISFKNNTEHLPLIGKVGLSWKTNSFDGCIKSCSIMDLTLLEEYGKPFWCFSSPVCVRCCPGPSDGPSFLGEAYCVDYSDSEGRLHMELVWVEETEEYFIVSLALYLRLAKVNQWFGTQY
SIO_010081: FBXO15
subclass of: SO_0000673
so part of: FBXO15
location: join(4445525..4445652,4452275..4452385,4454184..4454288,4458181..4458423,4458847..4459056,4462563..4462689,4463749..4463831,4464767..4464909,4480709..4480833,4481985..4482254)
location: region:4445525-4482254:1
so has part: feature:4445525-4445652:1:exon
so has part: feature:4452275-4452385:1:exon
so has part: feature:4454184-4454288:1:exon
so has part: feature:4458181-4458423:1:exon
so has part: feature:4458847-4459056:1:exon
so has part: feature:4462563-4462689:1:exon
so has part: feature:4463749-4463831:1:exon
so has part: feature:4464767-4464909:1:exon
so has part: feature:4480709-4480833:1:exon
so has part: feature:4481985-4482254:1:exon

XP_027381444.1
type: Protein
SIO_000068: ncbiprotein

position:4445525:1
position: 4445525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4482254:1
position: 4482254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4445525-4445652:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4452275-4452385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4454184-4454288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4458181-4458423:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4458847-4459056:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4462563-4462689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4463749-4463831:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4464767-4464909:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4480709-4480833:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4481985-4482254:1:exon

FBXO15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: FBXO15
product: F-box protein 15, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_027525644.1
SIO_010081: FBXO15
subclass of: SO_0000673
so part of: FBXO15
location: join(4445706..4445824,4452275..4452385,4454184..4454288,4458181..4458423,4458847..4459056,4462563..4462689,4463749..4463831,4464767..4464909,4480709..4480833,4481985..4482381)
location: region:4445706-4482381:1
so has part: feature:4445706-4445824:1:exon
so has part: feature:4452275-4452385:1:exon
so has part: feature:4454184-4454288:1:exon
so has part: feature:4458181-4458423:1:exon
so has part: feature:4458847-4459056:1:exon
so has part: feature:4462563-4462689:1:exon
so has part: feature:4463749-4463831:1:exon
so has part: feature:4464767-4464909:1:exon
so has part: feature:4480709-4480833:1:exon
so has part: feature:4481985-4482381:1:exon

position:4445706:1
position: 4445706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4445706-4445824:1:exon

position:4445824:1
position: 4445824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4452275-4452385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4454184-4454288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4458181-4458423:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4458847-4459056:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4462563-4462689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4463749-4463831:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4464767-4464909:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4480709-4480833:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4481985-4482381:1:exon

FBXO15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: FBXO15
product: F-box protein 15, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_027525645.1
SIO_010081: FBXO15
subclass of: SO_0000673
so part of: FBXO15
location: join(4446017..4446185,4452275..4452385,4454184..4454288,4458181..4458423,4458847..4459056,4462563..4462689,4463749..4463831,4464767..4464909,4480709..4480833,4481985..4482381)
location: region:4446017-4482381:1
so has part: feature:4446017-4446185:1:exon
so has part: feature:4452275-4452385:1:exon
so has part: feature:4454184-4454288:1:exon
so has part: feature:4458181-4458423:1:exon
so has part: feature:4458847-4459056:1:exon
so has part: feature:4462563-4462689:1:exon
so has part: feature:4463749-4463831:1:exon
so has part: feature:4464767-4464909:1:exon
so has part: feature:4480709-4480833:1:exon
so has part: feature:4481985-4482381:1:exon

position:4446017:1
position: 4446017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4446017-4446185:1:exon

position:4446185:1
position: 4446185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4452275-4452385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4454184-4454288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4458181-4458423:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4458847-4459056:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4462563-4462689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4463749-4463831:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4464767-4464909:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4480709-4480833:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4481985-4482381:1:exon

FBXO15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: FBXO15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 15 isoform X2
translation: MRPGAMLPAGPAALSRRARQDKVCRRPSTGCSASLDSLPSEVLLKILSYLDAAALLCAGCVNRRFYHLANDNFIWIRIYSTAFSPRRSHWRVDPAEKTDLSVNLLSAGDKEAGYWKKEYLTKQIASVKAALARVLKPLHPHTGLPVKTKEALRVSGLGWVIILRAADGREYTMEHADLSVNDSSVTVIWYGKDWPPLATLSTLDLCGVTPVFMGQSRTPSRIRPRWHSLITKYQLSQLTESSAVGGDRLMRVFCLPPGLVVGLWKREEELAFVMANLHLYCLVERSMLGSPAVPYELPPHTPVSDDSPERGLHGYRLHVDMHSGGASCLCGSFHNLSASKGYLENEYMKLTVISFKNNTEHLPLIGKVGLSWKTNSFDGCIKSCSIMDLTLLEEYGKPFWCFSSPVCVRCCPGPSDGPSFLGEAYCVDYSDSEGRLHMELVWVEETEEYFIVSLALYLRLAKVNQWFGTQY
SIO_010081: FBXO15
subclass of: SO_0000673
so part of: FBXO15
location: join(4452276..4452385,4454184..4454288,4458181..4458423,4458847..4459056,4462563..4462689,4463749..4463831,4464767..4464909,4480709..4480833,4481985..4482254)
location: region:4452276-4482254:1
so has part: feature:4452276-4452385:1:exon
so has part: feature:4454184-4454288:1:exon
so has part: feature:4458181-4458423:1:exon
so has part: feature:4458847-4459056:1:exon
so has part: feature:4462563-4462689:1:exon
so has part: feature:4463749-4463831:1:exon
so has part: feature:4464767-4464909:1:exon
so has part: feature:4480709-4480833:1:exon
so has part: feature:4481985-4482254:1:exon

XP_027381445.1
type: Protein
SIO_000068: ncbiprotein

position:4452276:1
position: 4452276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4452276-4452385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4454184-4454288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4458181-4458423:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4458847-4459056:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4462563-4462689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4463749-4463831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4464767-4464909:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4480709-4480833:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4481985-4482254:1:exon

FBXO15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: FBXO15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 15 isoform X2
translation: MRPGAMLPAGPAALSRRARQDKVCRRPSTGCSASLDSLPSEVLLKILSYLDAAALLCAGCVNRRFYHLANDNFIWIRIYSTAFSPRRSHWRVDPAEKTDLSVNLLSAGDKEAGYWKKEYLTKQIASVKAALARVLKPLHPHTGLPVKTKEALRVSGLGWVIILRAADGREYTMEHADLSVNDSSVTVIWYGKDWPPLATLSTLDLCGVTPVFMGQSRTPSRIRPRWHSLITKYQLSQLTESSAVGGDRLMRVFCLPPGLVVGLWKREEELAFVMANLHLYCLVERSMLGSPAVPYELPPHTPVSDDSPERGLHGYRLHVDMHSGGASCLCGSFHNLSASKGYLENEYMKLTVISFKNNTEHLPLIGKVGLSWKTNSFDGCIKSCSIMDLTLLEEYGKPFWCFSSPVCVRCCPGPSDGPSFLGEAYCVDYSDSEGRLHMELVWVEETEEYFIVSLALYLRLAKVNQWFGTQY
SIO_010081: FBXO15
subclass of: SO_0000673
so part of: FBXO15
location: join(4452276..4452385,4454184..4454288,4458181..4458423,4458847..4459056,4462563..4462689,4463749..4463831,4464767..4464909,4480709..4480833,4481985..4482254)
location: region:4452276-4482254:1
so has part: feature:4452276-4452385:1:exon
so has part: feature:4454184-4454288:1:exon
so has part: feature:4458181-4458423:1:exon
so has part: feature:4458847-4459056:1:exon
so has part: feature:4462563-4462689:1:exon
so has part: feature:4463749-4463831:1:exon
so has part: feature:4464767-4464909:1:exon
so has part: feature:4480709-4480833:1:exon
so has part: feature:4481985-4482254:1:exon

XP_027381446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4452276-4452385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4454184-4454288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4458181-4458423:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4458847-4459056:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4462563-4462689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4463749-4463831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4464767-4464909:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4480709-4480833:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4481985-4482254:1:exon

TRNAA-CGC
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TRNAA-CGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 4880042..4880113
location: region:4880042-4880113:1
so has part: feature:4880042-4880113:1:exon
subclass of: SO_0000663

113883099
type: Gene
SIO_000068: ncbigene

position:4880042:1
position: 4880042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4880113:1
position: 4880113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4880042-4880113:1:exon

TRNAA-CGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30522
gene: TRNAA-CGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon CGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:4880074..4880076,aa:Ala,seq:cgc)
SIO_010081: TRNAA-CGC
subclass of: SO_0000673
so part of: TRNAA-CGC
location: 4880042..4880113
location: region:4880042-4880113:1
so has part: feature:4880042-4880113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4880042-4880113:1:exon

LOC113882751
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5261318..5292047)
location: region:5261318-5292047:-1
so has part: feature:5261318-5292047:-1:exon
subclass of: SO_0000011

113882751
type: Gene
SIO_000068: ncbigene

position:5261318:-1
position: 5261318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5292047:-1
position: 5292047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5261318-5292047:-1:exon

LOC113882751
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882751
product: uncharacterized LOC113882751, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_003508437.1
SIO_010081: LOC113882751
subclass of: SO_0000673
so part of: LOC113882751
location: complement(join(5261318..5264316,5264548..5264678,5285228..5285930,5287528..5287670,5291567..5292047))
location: region:5261318-5292047:-1
so has part: feature:5291567-5292047:-1:exon
so has part: feature:5287528-5287670:-1:exon
so has part: feature:5285228-5285930:-1:exon
so has part: feature:5264548-5264678:-1:exon
so has part: feature:5261318-5264316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5291567-5292047:-1:exon

position:5291567:-1
position: 5291567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5287528-5287670:-1:exon

position:5287528:-1
position: 5287528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5287670:-1
position: 5287670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5285228-5285930:-1:exon

position:5285228:-1
position: 5285228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5285930:-1
position: 5285930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5264548-5264678:-1:exon

position:5264548:-1
position: 5264548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5264678:-1
position: 5264678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5261318-5264316:-1:exon

position:5264316:-1
position: 5264316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC113882751
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882751
product: uncharacterized LOC113882751, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003508440.1
SIO_010081: LOC113882751
subclass of: SO_0000673
so part of: LOC113882751
location: complement(join(5261318..5264316,5264548..5264678,5285228..5285822,5287528..5287670,5291567..5292045))
location: region:5261318-5292045:-1
so has part: feature:5291567-5292045:-1:exon
so has part: feature:5287528-5287670:-1:exon
so has part: feature:5285228-5285822:-1:exon
so has part: feature:5264548-5264678:-1:exon
so has part: feature:5261318-5264316:-1:exon

position:5292045:-1
position: 5292045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5291567-5292045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5287528-5287670:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5285228-5285822:-1:exon

position:5285822:-1
position: 5285822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5264548-5264678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5261318-5264316:-1:exon

LOC113882751
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882751
product: uncharacterized LOC113882751, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_003508438.1
SIO_010081: LOC113882751
subclass of: SO_0000673
so part of: LOC113882751
location: complement(join(5261318..5264316,5264548..5264678,5285228..5285930,5291567..5292044))
location: region:5261318-5292044:-1
so has part: feature:5291567-5292044:-1:exon
so has part: feature:5285228-5285930:-1:exon
so has part: feature:5264548-5264678:-1:exon
so has part: feature:5261318-5264316:-1:exon

position:5292044:-1
position: 5292044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5291567-5292044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5285228-5285930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5264548-5264678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5261318-5264316:-1:exon

LOC113882751
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882751
product: uncharacterized LOC113882751, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_003508439.1
SIO_010081: LOC113882751
subclass of: SO_0000673
so part of: LOC113882751
location: complement(join(5261318..5264316,5264548..5264678,5285228..5285822,5291567..5292041))
location: region:5261318-5292041:-1
so has part: feature:5291567-5292041:-1:exon
so has part: feature:5285228-5285822:-1:exon
so has part: feature:5264548-5264678:-1:exon
so has part: feature:5261318-5264316:-1:exon

position:5292041:-1
position: 5292041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5291567-5292041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5285228-5285822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5264548-5264678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5261318-5264316:-1:exon

LOC113882751
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882751
product: uncharacterized LOC113882751, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_003508435.1
SIO_010081: LOC113882751
subclass of: SO_0000673
so part of: LOC113882751
location: complement(join(5261318..5264316,5264548..5264678,5285228..5287670,5291567..5291848))
location: region:5261318-5291848:-1
so has part: feature:5291567-5291848:-1:exon
so has part: feature:5285228-5287670:-1:exon
so has part: feature:5264548-5264678:-1:exon
so has part: feature:5261318-5264316:-1:exon

position:5291848:-1
position: 5291848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5291567-5291848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5285228-5287670:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5264548-5264678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5261318-5264316:-1:exon

LOC113882751
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882751
product: uncharacterized LOC113882751, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_003508436.1
SIO_010081: LOC113882751
subclass of: SO_0000673
so part of: LOC113882751
location: complement(join(5263750..5264316,5264548..5264678,5285232..5287670,5291567..5291848))
location: region:5263750-5291848:-1
so has part: feature:5291567-5291848:-1:exon
so has part: feature:5285232-5287670:-1:exon
so has part: feature:5264548-5264678:-1:exon
so has part: feature:5263750-5264316:-1:exon

position:5263750:-1
position: 5263750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5291567-5291848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5285232-5287670:-1:exon

position:5285232:-1
position: 5285232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5264548-5264678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5263750-5264316:-1:exon

LOC113882750
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5292130..5294098
location: region:5292130-5294098:1
so has part: feature:5292130-5294098:1:exon
subclass of: SO_0000010

113882750
type: Gene
SIO_000068: ncbigene

position:5292130:1
position: 5292130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5294098:1
position: 5294098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5292130-5294098:1:exon

LOC113882750
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: LOC113882750
product: small nuclear ribonucleoprotein-associated protein B'-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_027525847.1
SIO_010081: LOC113882750
subclass of: SO_0000673
so part of: LOC113882750
location: join(5292130..5292217,5293399..5294098)
location: region:5292130-5294098:1
so has part: feature:5292130-5292217:1:exon
so has part: feature:5293399-5294098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5292130-5292217:1:exon

position:5292217:1
position: 5292217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5293399-5294098:1:exon

position:5293399:1
position: 5293399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC113882750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: LOC113882750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small nuclear ribonucleoprotein-associated protein B'-like
translation: MKLGTERAPAAAAAARSVAAVGPDLSPPGRAARPQPLSGLGWSAPGLAPRPPPPARPPASRGGGDAEGAGAAAGGADGGARRPGVRRASRPGCCRLRGGERASGCEREPGAEDARTRILLLCGLGSLAFPPPHSPPALHLFPVCTSQPSLDSVLSLTTGSLPVSKWN
SIO_010081: LOC113882750
subclass of: SO_0000673
so part of: LOC113882750
location: 5293571..5294074
location: region:5293571-5294074:1
so has part: feature:5293571-5294074:1:exon

XP_027381648.1
type: Protein
SIO_000068: ncbiprotein

position:5293571:1
position: 5293571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5294074:1
position: 5294074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5293571-5294074:1:exon

NETO1
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: NETO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5293827..5395924
location: region:5293827-5395924:1
so has part: feature:5293827-5395924:1:exon
subclass of: SO_0000010

113882748
type: Gene
SIO_000068: ncbigene

position:5293827:1
position: 5293827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5395924:1
position: 5395924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5293827-5395924:1:exon

NETO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: NETO1
product: neuropilin and tolloid like 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_027525845.1
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5293827..5294135,5296159..5296212,5296450..5296587,5301316..5301564,5351040..5351081,5351161..5351327,5362623..5362851,5389686..5389799,5392619..5392734)
location: region:5293827-5392734:1
so has part: feature:5293827-5294135:1:exon
so has part: feature:5296159-5296212:1:exon
so has part: feature:5296450-5296587:1:exon
so has part: feature:5301316-5301564:1:exon
so has part: feature:5351040-5351081:1:exon
so has part: feature:5351161-5351327:1:exon
so has part: feature:5362623-5362851:1:exon
so has part: feature:5389686-5389799:1:exon
so has part: feature:5392619-5392734:1:exon

position:5392734:1
position: 5392734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5293827-5294135:1:exon

position:5294135:1
position: 5294135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5296159-5296212:1:exon

position:5296159:1
position: 5296159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5296212:1
position: 5296212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5296450-5296587:1:exon

position:5296450:1
position: 5296450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5296587:1
position: 5296587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5301316-5301564:1:exon

position:5301316:1
position: 5301316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5301564:1
position: 5301564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5351040-5351081:1:exon

position:5351040:1
position: 5351040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5351081:1
position: 5351081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5351161-5351327:1:exon

position:5351161:1
position: 5351161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5351327:1
position: 5351327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5362623-5362851:1:exon

position:5362623:1
position: 5362623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5362851:1
position: 5362851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5389686-5389799:1:exon

position:5389686:1
position: 5389686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5389799:1
position: 5389799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5392619-5392734:1:exon

position:5392619:1
position: 5392619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NETO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: NETO1
product: neuropilin and tolloid like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_027525842.1
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5293830..5294135,5296159..5296212,5296450..5296587,5301316..5301564,5351040..5351081,5351161..5351327,5362623..5362851,5389686..5389799,5392509..5393067,5394040..5394114,5395386..5395924)
location: region:5293830-5395924:1
so has part: feature:5293830-5294135:1:exon
so has part: feature:5296159-5296212:1:exon
so has part: feature:5296450-5296587:1:exon
so has part: feature:5301316-5301564:1:exon
so has part: feature:5351040-5351081:1:exon
so has part: feature:5351161-5351327:1:exon
so has part: feature:5362623-5362851:1:exon
so has part: feature:5389686-5389799:1:exon
so has part: feature:5392509-5393067:1:exon
so has part: feature:5394040-5394114:1:exon
so has part: feature:5395386-5395924:1:exon

position:5293830:1
position: 5293830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5293830-5294135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5296159-5296212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5296450-5296587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5301316-5301564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5351040-5351081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5351161-5351327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5362623-5362851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5389686-5389799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5392509-5393067:1:exon

position:5392509:1
position: 5392509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5393067:1
position: 5393067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5394040-5394114:1:exon

position:5394040:1
position: 5394040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5394114:1
position: 5394114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5395386-5395924:1:exon

position:5395386:1
position: 5395386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NETO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: NETO1
product: neuropilin and tolloid like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_027525841.1
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5293831..5294135,5296159..5296212,5296450..5296587,5301316..5301564,5351040..5351081,5351161..5351327,5362623..5362851,5389686..5389799,5392509..5393067,5394040..5394114,5394968..5395919)
location: region:5293831-5395919:1
so has part: feature:5293831-5294135:1:exon
so has part: feature:5296159-5296212:1:exon
so has part: feature:5296450-5296587:1:exon
so has part: feature:5301316-5301564:1:exon
so has part: feature:5351040-5351081:1:exon
so has part: feature:5351161-5351327:1:exon
so has part: feature:5362623-5362851:1:exon
so has part: feature:5389686-5389799:1:exon
so has part: feature:5392509-5393067:1:exon
so has part: feature:5394040-5394114:1:exon
so has part: feature:5394968-5395919:1:exon

position:5293831:1
position: 5293831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5395919:1
position: 5395919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5293831-5294135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5296159-5296212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5296450-5296587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5301316-5301564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5351040-5351081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5351161-5351327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5362623-5362851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5389686-5389799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5392509-5393067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5394040-5394114:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5394968-5395919:1:exon

position:5394968:1
position: 5394968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NETO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: NETO1
product: neuropilin and tolloid like 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_027525846.1
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5293831..5294135,5296159..5296212,5296450..5296587,5301316..5301564,5362623..5362746)
location: region:5293831-5362746:1
so has part: feature:5293831-5294135:1:exon
so has part: feature:5296159-5296212:1:exon
so has part: feature:5296450-5296587:1:exon
so has part: feature:5301316-5301564:1:exon
so has part: feature:5362623-5362746:1:exon

position:5362746:1
position: 5362746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5293831-5294135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5296159-5296212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5296450-5296587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5301316-5301564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5362623-5362746:1:exon

NETO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: NETO1
product: neuropilin and tolloid like 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_027525844.1
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5293832..5294135,5296159..5296212,5296450..5296587,5301316..5301564,5351040..5351081,5351200..5351327,5362623..5362851,5389686..5389799,5392509..5393067,5394040..5394114,5395386..5395924)
location: region:5293832-5395924:1
so has part: feature:5293832-5294135:1:exon
so has part: feature:5296159-5296212:1:exon
so has part: feature:5296450-5296587:1:exon
so has part: feature:5301316-5301564:1:exon
so has part: feature:5351040-5351081:1:exon
so has part: feature:5351200-5351327:1:exon
so has part: feature:5362623-5362851:1:exon
so has part: feature:5389686-5389799:1:exon
so has part: feature:5392509-5393067:1:exon
so has part: feature:5394040-5394114:1:exon
so has part: feature:5395386-5395924:1:exon

position:5293832:1
position: 5293832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5293832-5294135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5296159-5296212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5296450-5296587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5301316-5301564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5351040-5351081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5351200-5351327:1:exon

position:5351200:1
position: 5351200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5362623-5362851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5389686-5389799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5392509-5393067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5394040-5394114:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5395386-5395924:1:exon

NETO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: NETO1
product: neuropilin and tolloid like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_027525843.1
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5293833..5294135,5296159..5296212,5296450..5296587,5301316..5301564,5351040..5351081,5351200..5351327,5362623..5362851,5389686..5389799,5392509..5393067,5394040..5394114,5394968..5395919)
location: region:5293833-5395919:1
so has part: feature:5293833-5294135:1:exon
so has part: feature:5296159-5296212:1:exon
so has part: feature:5296450-5296587:1:exon
so has part: feature:5301316-5301564:1:exon
so has part: feature:5351040-5351081:1:exon
so has part: feature:5351200-5351327:1:exon
so has part: feature:5362623-5362851:1:exon
so has part: feature:5389686-5389799:1:exon
so has part: feature:5392509-5393067:1:exon
so has part: feature:5394040-5394114:1:exon
so has part: feature:5394968-5395919:1:exon

position:5293833:1
position: 5293833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5293833-5294135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5296159-5296212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5296450-5296587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5301316-5301564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5351040-5351081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5351200-5351327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5362623-5362851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5389686-5389799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5392509-5393067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5394040-5394114:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5394968-5395919:1:exon

NETO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: NETO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 1 isoform X1
translation: MIYGRSLFHIVASLIILHLSGAAKKGTEKQTTSETQKSVQCGTWTKHAEGGIFTSPNYPSKYPPDRECIYIIEAAPRQCIELYFDEKYSIEPSWECKFDHIEVRDGPFGFSPIIGRFCGQQNPPVIKSSGRFLWIKFFADGELESMGFSARYNFTPDPDFKDLGVLKPLPVPFLYVCLASRYLVCEFEMGGPEGIVESIQIMKEGKASASEAVDCKWYIRAPPRSKIYLRFLDYEMQNSNECKRNFVAVYDGSSSVEDLKAKFCSTVANDVMLRTGLGVIRMWADEGSRNSRFQMLFTSFQEPPCEGNTFFCHSNMCINNTLVCNGLQNCVYPWDENHCKEKRKAGLLDQLTNTSGTVIGVTSCIVIILIIISVIVQIKQPRKKYVQRKSDFDQTVFQEVFEPPHYELCTLRGTGATADFADVADDFENYHKLRRSSSKCIHDHHCGSQLSSAKGSRSNLSTRDASVLTEMPPQPIKPLIPPMNRRNILVMKHNYSQEAADACDIDEIEEVPTTSHRLSRHEKAVQRFCLIGSLSKHESEYNTTRV
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5294108..5294135,5296159..5296212,5296450..5296587,5301316..5301564,5351040..5351081,5351161..5351327,5362623..5362851,5389686..5389799,5392509..5393067,5394040..5394100)
location: region:5294108-5394100:1
so has part: feature:5294108-5294135:1:exon
so has part: feature:5296159-5296212:1:exon
so has part: feature:5296450-5296587:1:exon
so has part: feature:5301316-5301564:1:exon
so has part: feature:5351040-5351081:1:exon
so has part: feature:5351161-5351327:1:exon
so has part: feature:5362623-5362851:1:exon
so has part: feature:5389686-5389799:1:exon
so has part: feature:5392509-5393067:1:exon
so has part: feature:5394040-5394100:1:exon

XP_027381642.1
type: Protein
SIO_000068: ncbiprotein

position:5294108:1
position: 5294108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5394100:1
position: 5394100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5294108-5294135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5296159-5296212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5296450-5296587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5301316-5301564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5351040-5351081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5351161-5351327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5362623-5362851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5389686-5389799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5392509-5393067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5394040-5394100:1:exon

NETO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: NETO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 1 isoform X1
translation: MIYGRSLFHIVASLIILHLSGAAKKGTEKQTTSETQKSVQCGTWTKHAEGGIFTSPNYPSKYPPDRECIYIIEAAPRQCIELYFDEKYSIEPSWECKFDHIEVRDGPFGFSPIIGRFCGQQNPPVIKSSGRFLWIKFFADGELESMGFSARYNFTPDPDFKDLGVLKPLPVPFLYVCLASRYLVCEFEMGGPEGIVESIQIMKEGKASASEAVDCKWYIRAPPRSKIYLRFLDYEMQNSNECKRNFVAVYDGSSSVEDLKAKFCSTVANDVMLRTGLGVIRMWADEGSRNSRFQMLFTSFQEPPCEGNTFFCHSNMCINNTLVCNGLQNCVYPWDENHCKEKRKAGLLDQLTNTSGTVIGVTSCIVIILIIISVIVQIKQPRKKYVQRKSDFDQTVFQEVFEPPHYELCTLRGTGATADFADVADDFENYHKLRRSSSKCIHDHHCGSQLSSAKGSRSNLSTRDASVLTEMPPQPIKPLIPPMNRRNILVMKHNYSQEAADACDIDEIEEVPTTSHRLSRHEKAVQRFCLIGSLSKHESEYNTTRV
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5294108..5294135,5296159..5296212,5296450..5296587,5301316..5301564,5351040..5351081,5351161..5351327,5362623..5362851,5389686..5389799,5392509..5393067,5394040..5394100)
location: region:5294108-5394100:1
so has part: feature:5294108-5294135:1:exon
so has part: feature:5296159-5296212:1:exon
so has part: feature:5296450-5296587:1:exon
so has part: feature:5301316-5301564:1:exon
so has part: feature:5351040-5351081:1:exon
so has part: feature:5351161-5351327:1:exon
so has part: feature:5362623-5362851:1:exon
so has part: feature:5389686-5389799:1:exon
so has part: feature:5392509-5393067:1:exon
so has part: feature:5394040-5394100:1:exon

XP_027381643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5294108-5294135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5296159-5296212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5296450-5296587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5301316-5301564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5351040-5351081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5351161-5351327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5362623-5362851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5389686-5389799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5392509-5393067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5394040-5394100:1:exon

NETO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: NETO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 1 isoform X2
translation: MIYGRSLFHIVASLIILHLSGAAKKGTEKQTTSETQKSVQCGTWTKHAEGGIFTSPNYPSKYPPDRECIYIIEAAPRQCIELYFDEKYSIEPSWECKFDHIEVRDGPFGFSPIIGRFCGQQNPPVIKSSGRFLWIKFFADGELESMGFSARYNFTPDPDFKDLGVLKPLPVCEFEMGGPEGIVESIQIMKEGKASASEAVDCKWYIRAPPRSKIYLRFLDYEMQNSNECKRNFVAVYDGSSSVEDLKAKFCSTVANDVMLRTGLGVIRMWADEGSRNSRFQMLFTSFQEPPCEGNTFFCHSNMCINNTLVCNGLQNCVYPWDENHCKEKRKAGLLDQLTNTSGTVIGVTSCIVIILIIISVIVQIKQPRKKYVQRKSDFDQTVFQEVFEPPHYELCTLRGTGATADFADVADDFENYHKLRRSSSKCIHDHHCGSQLSSAKGSRSNLSTRDASVLTEMPPQPIKPLIPPMNRRNILVMKHNYSQEAADACDIDEIEEVPTTSHRLSRHEKAVQRFCLIGSLSKHESEYNTTRV
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5294108..5294135,5296159..5296212,5296450..5296587,5301316..5301564,5351040..5351081,5351200..5351327,5362623..5362851,5389686..5389799,5392509..5393067,5394040..5394100)
location: region:5294108-5394100:1
so has part: feature:5294108-5294135:1:exon
so has part: feature:5296159-5296212:1:exon
so has part: feature:5296450-5296587:1:exon
so has part: feature:5301316-5301564:1:exon
so has part: feature:5351040-5351081:1:exon
so has part: feature:5351200-5351327:1:exon
so has part: feature:5362623-5362851:1:exon
so has part: feature:5389686-5389799:1:exon
so has part: feature:5392509-5393067:1:exon
so has part: feature:5394040-5394100:1:exon

XP_027381644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5294108-5294135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5296159-5296212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5296450-5296587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5301316-5301564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5351040-5351081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5351200-5351327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5362623-5362851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5389686-5389799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5392509-5393067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5394040-5394100:1:exon

NETO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: NETO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 1 isoform X2
translation: MIYGRSLFHIVASLIILHLSGAAKKGTEKQTTSETQKSVQCGTWTKHAEGGIFTSPNYPSKYPPDRECIYIIEAAPRQCIELYFDEKYSIEPSWECKFDHIEVRDGPFGFSPIIGRFCGQQNPPVIKSSGRFLWIKFFADGELESMGFSARYNFTPDPDFKDLGVLKPLPVCEFEMGGPEGIVESIQIMKEGKASASEAVDCKWYIRAPPRSKIYLRFLDYEMQNSNECKRNFVAVYDGSSSVEDLKAKFCSTVANDVMLRTGLGVIRMWADEGSRNSRFQMLFTSFQEPPCEGNTFFCHSNMCINNTLVCNGLQNCVYPWDENHCKEKRKAGLLDQLTNTSGTVIGVTSCIVIILIIISVIVQIKQPRKKYVQRKSDFDQTVFQEVFEPPHYELCTLRGTGATADFADVADDFENYHKLRRSSSKCIHDHHCGSQLSSAKGSRSNLSTRDASVLTEMPPQPIKPLIPPMNRRNILVMKHNYSQEAADACDIDEIEEVPTTSHRLSRHEKAVQRFCLIGSLSKHESEYNTTRV
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5294108..5294135,5296159..5296212,5296450..5296587,5301316..5301564,5351040..5351081,5351200..5351327,5362623..5362851,5389686..5389799,5392509..5393067,5394040..5394100)
location: region:5294108-5394100:1
so has part: feature:5294108-5294135:1:exon
so has part: feature:5296159-5296212:1:exon
so has part: feature:5296450-5296587:1:exon
so has part: feature:5301316-5301564:1:exon
so has part: feature:5351040-5351081:1:exon
so has part: feature:5351200-5351327:1:exon
so has part: feature:5362623-5362851:1:exon
so has part: feature:5389686-5389799:1:exon
so has part: feature:5392509-5393067:1:exon
so has part: feature:5394040-5394100:1:exon

XP_027381645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5294108-5294135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5296159-5296212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5296450-5296587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5301316-5301564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5351040-5351081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5351200-5351327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5362623-5362851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5389686-5389799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5392509-5393067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5394040-5394100:1:exon

NETO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: NETO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 1 isoform X3
translation: MIYGRSLFHIVASLIILHLSGAAKKGTEKQTTSETQKSVQCGTWTKHAEGGIFTSPNYPSKYPPDRECIYIIEAAPRQCIELYFDEKYSIEPSWECKFDHIEVRDGPFGFSPIIGRFCGQQNPPVIKSSGRFLWIKFFADGELESMGFSARYNFTPDPDFKDLGVLKPLPVPFLYVCLASRYLVCEFEMGGPEGIVESIQIMKEGKASASEAVDCKWYIRAPPRSKIYLRFLDYEMQNSNECKRNFVAVYDGSSSVEDLKAKFCSTVANDVMLRTGLGVIRMWADEGSRNSRFQMLFTSFQEPPCEGNTFFCHSNMCINNTLVCNGLQNCVYPWDENHCKDQTAS
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5294108..5294135,5296159..5296212,5296450..5296587,5301316..5301564,5351040..5351081,5351161..5351327,5362623..5362851,5389686..5389799,5392619..5392635)
location: region:5294108-5392635:1
so has part: feature:5294108-5294135:1:exon
so has part: feature:5296159-5296212:1:exon
so has part: feature:5296450-5296587:1:exon
so has part: feature:5301316-5301564:1:exon
so has part: feature:5351040-5351081:1:exon
so has part: feature:5351161-5351327:1:exon
so has part: feature:5362623-5362851:1:exon
so has part: feature:5389686-5389799:1:exon
so has part: feature:5392619-5392635:1:exon

XP_027381646.1
type: Protein
SIO_000068: ncbiprotein

position:5392635:1
position: 5392635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5294108-5294135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5296159-5296212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5296450-5296587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5301316-5301564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5351040-5351081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5351161-5351327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5362623-5362851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5389686-5389799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5392619-5392635:1:exon

NETO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: NETO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 1 isoform X4
translation: MIYGRSLFHIVASLIILHLSGAAKKGTEKQTTSETQKSVQCGTWTKHAEGGIFTSPNYPSKYPPDRECIYIIEAAPRQCIELYFDEKYSIEPSWECKFDHIEVRDGPFGFSPIIGRFCGQQNPPVIKSSGRFLWIKFFADGELESMGFSARYNFTPDLLTVLGL
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5294108..5294135,5296159..5296212,5296450..5296587,5301316..5301564,5362623..5362648)
location: region:5294108-5362648:1
so has part: feature:5294108-5294135:1:exon
so has part: feature:5296159-5296212:1:exon
so has part: feature:5296450-5296587:1:exon
so has part: feature:5301316-5301564:1:exon
so has part: feature:5362623-5362648:1:exon

XP_027381647.1
type: Protein
SIO_000068: ncbiprotein

position:5362648:1
position: 5362648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5294108-5294135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5296159-5296212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5296450-5296587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5301316-5301564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5362623-5362648:1:exon

LOC113882935
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5404644..5407205
location: region:5404644-5407205:1
so has part: feature:5404644-5407205:1:exon
subclass of: SO_0000011

113882935
type: Gene
SIO_000068: ncbigene

position:5404644:1
position: 5404644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5407205:1
position: 5407205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5404644-5407205:1:exon

LOC113882935
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882935
product: uncharacterized LOC113882935
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_003508490.1
SIO_010081: LOC113882935
subclass of: SO_0000673
so part of: LOC113882935
location: join(5404644..5405255,5406143..5407205)
location: region:5404644-5407205:1
so has part: feature:5404644-5405255:1:exon
so has part: feature:5406143-5407205:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5404644-5405255:1:exon

position:5405255:1
position: 5405255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5406143-5407205:1:exon

position:5406143:1
position: 5406143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CBLN2
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: CBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5544895..5553252
location: region:5544895-5553252:1
so has part: feature:5544895-5553252:1:exon
subclass of: SO_0000010

113882844
type: Gene
SIO_000068: ncbigene

position:5544895:1
position: 5544895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5553252:1
position: 5553252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5544895-5553252:1:exon

CBLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CBLN2
product: cerebellin 2 precursor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_027525988.1
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5544895..5545334,5545822..5545995,5546418..5546462,5547632..5548121,5551174..5551293,5551529..5553252)
location: region:5544895-5553252:1
so has part: feature:5544895-5545334:1:exon
so has part: feature:5545822-5545995:1:exon
so has part: feature:5546418-5546462:1:exon
so has part: feature:5547632-5548121:1:exon
so has part: feature:5551174-5551293:1:exon
so has part: feature:5551529-5553252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5544895-5545334:1:exon

position:5545334:1
position: 5545334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5545822-5545995:1:exon

position:5545822:1
position: 5545822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5545995:1
position: 5545995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5546418-5546462:1:exon

position:5546418:1
position: 5546418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5546462:1
position: 5546462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5547632-5548121:1:exon

position:5547632:1
position: 5547632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5548121:1
position: 5548121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5551174-5551293:1:exon

position:5551174:1
position: 5551174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5551293:1
position: 5551293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5551529-5553252:1:exon

position:5551529:1
position: 5551529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CBLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CBLN2
product: cerebellin 2 precursor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_027525989.1
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5545324..5545413,5545822..5545995,5546418..5546462,5547632..5548121,5551174..5551293,5551529..5553252)
location: region:5545324-5553252:1
so has part: feature:5545324-5545413:1:exon
so has part: feature:5545822-5545995:1:exon
so has part: feature:5546418-5546462:1:exon
so has part: feature:5547632-5548121:1:exon
so has part: feature:5551174-5551293:1:exon
so has part: feature:5551529-5553252:1:exon

position:5545324:1
position: 5545324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5545324-5545413:1:exon

position:5545413:1
position: 5545413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5545822-5545995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5546418-5546462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5547632-5548121:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5551174-5551293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5551529-5553252:1:exon

CBLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CBLN2
product: cerebellin 2 precursor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_027525990.1
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5545532..5545995,5546394..5546462,5547632..5548121,5551174..5551293,5551529..5553252)
location: region:5545532-5553252:1
so has part: feature:5545532-5545995:1:exon
so has part: feature:5546394-5546462:1:exon
so has part: feature:5547632-5548121:1:exon
so has part: feature:5551174-5551293:1:exon
so has part: feature:5551529-5553252:1:exon

position:5545532:1
position: 5545532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5545532-5545995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5546394-5546462:1:exon

position:5546394:1
position: 5546394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5547632-5548121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5551174-5551293:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5551529-5553252:1:exon

CBLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CBLN2
product: cerebellin 2 precursor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_027525987.1
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5545532..5545995,5546418..5546462,5547632..5548121,5551174..5551293,5551529..5553252)
location: region:5545532-5553252:1
so has part: feature:5545532-5545995:1:exon
so has part: feature:5546418-5546462:1:exon
so has part: feature:5547632-5548121:1:exon
so has part: feature:5551174-5551293:1:exon
so has part: feature:5551529-5553252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5545532-5545995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5546418-5546462:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5547632-5548121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5551174-5551293:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5551529-5553252:1:exon

CBLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CBLN2
product: cerebellin 2 precursor, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_027525992.1
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5545532..5545995,5547632..5548121,5551174..5551293,5551529..5553252)
location: region:5545532-5553252:1
so has part: feature:5545532-5545995:1:exon
so has part: feature:5547632-5548121:1:exon
so has part: feature:5551174-5551293:1:exon
so has part: feature:5551529-5553252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5545532-5545995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5547632-5548121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5551174-5551293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5551529-5553252:1:exon

CBLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CBLN2
product: cerebellin 2 precursor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_027525991.1
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5545532..5545987,5546418..5546462,5547632..5548121,5551174..5551293,5551529..5553252)
location: region:5545532-5553252:1
so has part: feature:5545532-5545987:1:exon
so has part: feature:5546418-5546462:1:exon
so has part: feature:5547632-5548121:1:exon
so has part: feature:5551174-5551293:1:exon
so has part: feature:5551529-5553252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5545532-5545987:1:exon

position:5545987:1
position: 5545987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5546418-5546462:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5547632-5548121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5551174-5551293:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5551529-5553252:1:exon

CBLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CBLN2
product: cerebellin 2 precursor, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_027525993.1
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5546485..5546700,5547632..5548121,5551174..5551293,5551529..5553252)
location: region:5546485-5553252:1
so has part: feature:5546485-5546700:1:exon
so has part: feature:5547632-5548121:1:exon
so has part: feature:5551174-5551293:1:exon
so has part: feature:5551529-5553252:1:exon

position:5546485:1
position: 5546485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5546485-5546700:1:exon

position:5546700:1
position: 5546700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5547632-5548121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5551174-5551293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5551529-5553252:1:exon

CBLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-2
translation: MLAPGRGPRGPPLTMPGRRGALREPAGCGSGLGAALALLLLLLPAGCPVRAQNDTEPIVLEGKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5547765..5548121,5551174..5551293,5551529..5551726)
location: region:5547765-5551726:1
so has part: feature:5547765-5548121:1:exon
so has part: feature:5551174-5551293:1:exon
so has part: feature:5551529-5551726:1:exon

XP_027381788.1
type: Protein
SIO_000068: ncbiprotein

position:5547765:1
position: 5547765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5551726:1
position: 5551726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5547765-5548121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5551174-5551293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5551529-5551726:1:exon

CBLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-2
translation: MLAPGRGPRGPPLTMPGRRGALREPAGCGSGLGAALALLLLLLPAGCPVRAQNDTEPIVLEGKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5547765..5548121,5551174..5551293,5551529..5551726)
location: region:5547765-5551726:1
so has part: feature:5547765-5548121:1:exon
so has part: feature:5551174-5551293:1:exon
so has part: feature:5551529-5551726:1:exon

XP_027381789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5547765-5548121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5551174-5551293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5551529-5551726:1:exon

CBLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-2
translation: MLAPGRGPRGPPLTMPGRRGALREPAGCGSGLGAALALLLLLLPAGCPVRAQNDTEPIVLEGKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5547765..5548121,5551174..5551293,5551529..5551726)
location: region:5547765-5551726:1
so has part: feature:5547765-5548121:1:exon
so has part: feature:5551174-5551293:1:exon
so has part: feature:5551529-5551726:1:exon

XP_027381790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5547765-5548121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5551174-5551293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5551529-5551726:1:exon

CBLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-2
translation: MLAPGRGPRGPPLTMPGRRGALREPAGCGSGLGAALALLLLLLPAGCPVRAQNDTEPIVLEGKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5547765..5548121,5551174..5551293,5551529..5551726)
location: region:5547765-5551726:1
so has part: feature:5547765-5548121:1:exon
so has part: feature:5551174-5551293:1:exon
so has part: feature:5551529-5551726:1:exon

XP_027381791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5547765-5548121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5551174-5551293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5551529-5551726:1:exon

CBLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-2
translation: MLAPGRGPRGPPLTMPGRRGALREPAGCGSGLGAALALLLLLLPAGCPVRAQNDTEPIVLEGKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5547765..5548121,5551174..5551293,5551529..5551726)
location: region:5547765-5551726:1
so has part: feature:5547765-5548121:1:exon
so has part: feature:5551174-5551293:1:exon
so has part: feature:5551529-5551726:1:exon

XP_027381792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5547765-5548121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5551174-5551293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5551529-5551726:1:exon

CBLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-2
translation: MLAPGRGPRGPPLTMPGRRGALREPAGCGSGLGAALALLLLLLPAGCPVRAQNDTEPIVLEGKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5547765..5548121,5551174..5551293,5551529..5551726)
location: region:5547765-5551726:1
so has part: feature:5547765-5548121:1:exon
so has part: feature:5551174-5551293:1:exon
so has part: feature:5551529-5551726:1:exon

XP_027381793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5547765-5548121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5551174-5551293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5551529-5551726:1:exon

CBLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-2
translation: MLAPGRGPRGPPLTMPGRRGALREPAGCGSGLGAALALLLLLLPAGCPVRAQNDTEPIVLEGKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5547765..5548121,5551174..5551293,5551529..5551726)
location: region:5547765-5551726:1
so has part: feature:5547765-5548121:1:exon
so has part: feature:5551174-5551293:1:exon
so has part: feature:5551529-5551726:1:exon

XP_027381794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5547765-5548121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5551174-5551293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5551529-5551726:1:exon

LOC113882948
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7153341..7154207)
location: region:7153341-7154207:-1
so has part: feature:7153341-7154207:-1:exon
subclass of: SO_0000011

113882948
type: Gene
SIO_000068: ncbigene

position:7153341:-1
position: 7153341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7154207:-1
position: 7154207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7153341-7154207:-1:exon

LOC113882948
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882948
product: uncharacterized LOC113882948
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XR_003508496.1
SIO_010081: LOC113882948
subclass of: SO_0000673
so part of: LOC113882948
location: complement(join(7153341..7153778,7154016..7154207))
location: region:7153341-7154207:-1
so has part: feature:7154016-7154207:-1:exon
so has part: feature:7153341-7153778:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7154016-7154207:-1:exon

position:7154016:-1
position: 7154016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7153341-7153778:-1:exon

position:7153778:-1
position: 7153778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SOCS6
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: SOCS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7237503..7273522)
location: region:7237503-7273522:-1
so has part: feature:7237503-7273522:-1:exon
subclass of: SO_0000010

113882672
type: Gene
SIO_000068: ncbigene

position:7237503:-1
position: 7237503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7273522:-1
position: 7273522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7237503-7273522:-1:exon

SOCS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SOCS6
product: suppressor of cytokine signaling 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_027525659.1
SIO_010081: SOCS6
subclass of: SO_0000673
so part of: SOCS6
location: complement(join(7237503..7243141,7267190..7267380,7273329..7273522))
location: region:7237503-7273522:-1
so has part: feature:7273329-7273522:-1:exon
so has part: feature:7267190-7267380:-1:exon
so has part: feature:7237503-7243141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7273329-7273522:-1:exon

position:7273329:-1
position: 7273329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7267190-7267380:-1:exon

position:7267190:-1
position: 7267190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7267380:-1
position: 7267380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7237503-7243141:-1:exon

position:7243141:-1
position: 7243141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SOCS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SOCS6
product: suppressor of cytokine signaling 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_027525660.1
SIO_010081: SOCS6
subclass of: SO_0000673
so part of: SOCS6
location: complement(join(7237503..7243141,7245114..7245280,7267190..7267380,7272870..7273012))
location: region:7237503-7273012:-1
so has part: feature:7272870-7273012:-1:exon
so has part: feature:7267190-7267380:-1:exon
so has part: feature:7245114-7245280:-1:exon
so has part: feature:7237503-7243141:-1:exon

position:7273012:-1
position: 7273012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7272870-7273012:-1:exon

position:7272870:-1
position: 7272870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7267190-7267380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7245114-7245280:-1:exon

position:7245114:-1
position: 7245114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7245280:-1
position: 7245280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7237503-7243141:-1:exon

SOCS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SOCS6
product: suppressor of cytokine signaling 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_027525661.1
SIO_010081: SOCS6
subclass of: SO_0000673
so part of: SOCS6
location: complement(join(7237503..7243141,7266194..7266269,7267190..7267380,7272870..7273012))
location: region:7237503-7273012:-1
so has part: feature:7272870-7273012:-1:exon
so has part: feature:7267190-7267380:-1:exon
so has part: feature:7266194-7266269:-1:exon
so has part: feature:7237503-7243141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7272870-7273012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7267190-7267380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7266194-7266269:-1:exon

position:7266194:-1
position: 7266194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7266269:-1
position: 7266269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7237503-7243141:-1:exon

SOCS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SOCS6
product: suppressor of cytokine signaling 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 161 samples with support for all annotated introns
transcript id: XM_027525658.1
SIO_010081: SOCS6
subclass of: SO_0000673
so part of: SOCS6
location: complement(join(7237503..7243141,7267190..7267380,7272870..7273005))
location: region:7237503-7273005:-1
so has part: feature:7272870-7273005:-1:exon
so has part: feature:7267190-7267380:-1:exon
so has part: feature:7237503-7243141:-1:exon

position:7273005:-1
position: 7273005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7272870-7273005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7267190-7267380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7237503-7243141:-1:exon

SOCS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: SOCS6
product: suppressor of cytokine signaling 6, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_027525662.1
SIO_010081: SOCS6
subclass of: SO_0000673
so part of: SOCS6
location: complement(join(7237503..7243141,7257101..7257540))
location: region:7237503-7257540:-1
so has part: feature:7257101-7257540:-1:exon
so has part: feature:7237503-7243141:-1:exon

position:7257540:-1
position: 7257540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7257101-7257540:-1:exon

position:7257101:-1
position: 7257101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7237503-7243141:-1:exon

SOCS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SOCS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of cytokine signaling 6
translation: MKKISLKTFRKSFNLSKSKEDAEFMVVQQPALAGDFGKEESLFGSCYGKEMAGCELHGEDEKGGGGKNRAKSESLMGTLKRRLSAKQKAKGKGGAAAGGAADEDTFSSSSAPLVFKDARAPRPMRSTSLRSHHYSPTPWPLRPTASEETCIRMEVRVKALVHSPGTGPALNGVRKDFGELRPAAEPACPCPEPPAAPGSPAPVAGDLRLRLGEHVPVVLGLLPQDYLPYTVPLDGSSPMEVSAVPPPPAAGGPCPARRDEDAGRPAPELFGDPPVGGLLAGPAAGVLPSPRGGPDDGPPLSPLLPPLQTDPSQRTFTGLAGPDAHAADSVRCHLNFDPTSAPGVARVYDSVQSSGPLAVTSLTEELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIRDSENGAFCYSRSRLPGSATYPVRLTNPVSRFMQVRSLQYLCRFVIRQYTRIDLIQKLPLPNKMKDYLQEKHY
SIO_010081: SOCS6
subclass of: SO_0000673
so part of: SOCS6
location: complement(7241435..7243012)
location: region:7241435-7243012:-1
so has part: feature:7241435-7243012:-1:exon

XP_027381459.1
type: Protein
SIO_000068: ncbiprotein

position:7241435:-1
position: 7241435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7243012:-1
position: 7243012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7241435-7243012:-1:exon

SOCS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SOCS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of cytokine signaling 6
translation: MKKISLKTFRKSFNLSKSKEDAEFMVVQQPALAGDFGKEESLFGSCYGKEMAGCELHGEDEKGGGGKNRAKSESLMGTLKRRLSAKQKAKGKGGAAAGGAADEDTFSSSSAPLVFKDARAPRPMRSTSLRSHHYSPTPWPLRPTASEETCIRMEVRVKALVHSPGTGPALNGVRKDFGELRPAAEPACPCPEPPAAPGSPAPVAGDLRLRLGEHVPVVLGLLPQDYLPYTVPLDGSSPMEVSAVPPPPAAGGPCPARRDEDAGRPAPELFGDPPVGGLLAGPAAGVLPSPRGGPDDGPPLSPLLPPLQTDPSQRTFTGLAGPDAHAADSVRCHLNFDPTSAPGVARVYDSVQSSGPLAVTSLTEELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIRDSENGAFCYSRSRLPGSATYPVRLTNPVSRFMQVRSLQYLCRFVIRQYTRIDLIQKLPLPNKMKDYLQEKHY
SIO_010081: SOCS6
subclass of: SO_0000673
so part of: SOCS6
location: complement(7241435..7243012)
location: region:7241435-7243012:-1
so has part: feature:7241435-7243012:-1:exon

XP_027381460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7241435-7243012:-1:exon

SOCS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SOCS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of cytokine signaling 6
translation: MKKISLKTFRKSFNLSKSKEDAEFMVVQQPALAGDFGKEESLFGSCYGKEMAGCELHGEDEKGGGGKNRAKSESLMGTLKRRLSAKQKAKGKGGAAAGGAADEDTFSSSSAPLVFKDARAPRPMRSTSLRSHHYSPTPWPLRPTASEETCIRMEVRVKALVHSPGTGPALNGVRKDFGELRPAAEPACPCPEPPAAPGSPAPVAGDLRLRLGEHVPVVLGLLPQDYLPYTVPLDGSSPMEVSAVPPPPAAGGPCPARRDEDAGRPAPELFGDPPVGGLLAGPAAGVLPSPRGGPDDGPPLSPLLPPLQTDPSQRTFTGLAGPDAHAADSVRCHLNFDPTSAPGVARVYDSVQSSGPLAVTSLTEELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIRDSENGAFCYSRSRLPGSATYPVRLTNPVSRFMQVRSLQYLCRFVIRQYTRIDLIQKLPLPNKMKDYLQEKHY
SIO_010081: SOCS6
subclass of: SO_0000673
so part of: SOCS6
location: complement(7241435..7243012)
location: region:7241435-7243012:-1
so has part: feature:7241435-7243012:-1:exon

XP_027381461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7241435-7243012:-1:exon

SOCS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SOCS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of cytokine signaling 6
translation: MKKISLKTFRKSFNLSKSKEDAEFMVVQQPALAGDFGKEESLFGSCYGKEMAGCELHGEDEKGGGGKNRAKSESLMGTLKRRLSAKQKAKGKGGAAAGGAADEDTFSSSSAPLVFKDARAPRPMRSTSLRSHHYSPTPWPLRPTASEETCIRMEVRVKALVHSPGTGPALNGVRKDFGELRPAAEPACPCPEPPAAPGSPAPVAGDLRLRLGEHVPVVLGLLPQDYLPYTVPLDGSSPMEVSAVPPPPAAGGPCPARRDEDAGRPAPELFGDPPVGGLLAGPAAGVLPSPRGGPDDGPPLSPLLPPLQTDPSQRTFTGLAGPDAHAADSVRCHLNFDPTSAPGVARVYDSVQSSGPLAVTSLTEELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIRDSENGAFCYSRSRLPGSATYPVRLTNPVSRFMQVRSLQYLCRFVIRQYTRIDLIQKLPLPNKMKDYLQEKHY
SIO_010081: SOCS6
subclass of: SO_0000673
so part of: SOCS6
location: complement(7241435..7243012)
location: region:7241435-7243012:-1
so has part: feature:7241435-7243012:-1:exon

XP_027381462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7241435-7243012:-1:exon

SOCS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: SOCS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of cytokine signaling 6
translation: MKKISLKTFRKSFNLSKSKEDAEFMVVQQPALAGDFGKEESLFGSCYGKEMAGCELHGEDEKGGGGKNRAKSESLMGTLKRRLSAKQKAKGKGGAAAGGAADEDTFSSSSAPLVFKDARAPRPMRSTSLRSHHYSPTPWPLRPTASEETCIRMEVRVKALVHSPGTGPALNGVRKDFGELRPAAEPACPCPEPPAAPGSPAPVAGDLRLRLGEHVPVVLGLLPQDYLPYTVPLDGSSPMEVSAVPPPPAAGGPCPARRDEDAGRPAPELFGDPPVGGLLAGPAAGVLPSPRGGPDDGPPLSPLLPPLQTDPSQRTFTGLAGPDAHAADSVRCHLNFDPTSAPGVARVYDSVQSSGPLAVTSLTEELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIRDSENGAFCYSRSRLPGSATYPVRLTNPVSRFMQVRSLQYLCRFVIRQYTRIDLIQKLPLPNKMKDYLQEKHY
SIO_010081: SOCS6
subclass of: SO_0000673
so part of: SOCS6
location: complement(7241435..7243012)
location: region:7241435-7243012:-1
so has part: feature:7241435-7243012:-1:exon

XP_027381463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7241435-7243012:-1:exon

RTTN
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: RTTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7342571..7460759
location: region:7342571-7460759:1
so has part: feature:7342571-7460759:1:exon
subclass of: SO_0000010

113882697
type: Gene
SIO_000068: ncbigene

position:7342571:1
position: 7342571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7460759:1
position: 7460759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7342571-7460759:1:exon

RTTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: RTTN
product: rotatin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_027525761.1
SIO_010081: RTTN
subclass of: SO_0000673
so part of: RTTN
location: join(7342571..7342902,7343228..7343415,7344258..7344435,7346342..7346431,7348437..7348530,7349880..7349994,7350940..7351090,7355149..7355314,7357420..7357598,7360015..7360130,7363361..7363531,7368988..7369200,7370713..7370825,7372611..7372737,7374518..7374643,7375148..7375264,7376094..7376233,7379995..7380166,7381760..7381859,7383815..7383903,7384483..7384600,7386186..7386282,7386911..7386979,7389090..7389278,7389862..7390101,7392348..7392492,7399136..7399290,7400650..7400869,7409799..7409927,7410394..7410504,7412406..7412564,7413724..7413795,7421568..7421757,7423148..7423239,7429179..7429272,7431609..7431801,7433343..7433433,7436587..7436740,7438886..7439023,7439335..7439552,7440159..7440264,7441223..7441320,7443009..7443086,7446404..7446530,7447583..7447785,7451875..7452142,7458120..7458223,7459257..7459326,7460447..7460759)
location: region:7342571-7460759:1
so has part: feature:7342571-7342902:1:exon
so has part: feature:7343228-7343415:1:exon
so has part: feature:7344258-7344435:1:exon
so has part: feature:7346342-7346431:1:exon
so has part: feature:7348437-7348530:1:exon
so has part: feature:7349880-7349994:1:exon
so has part: feature:7350940-7351090:1:exon
so has part: feature:7355149-7355314:1:exon
so has part: feature:7357420-7357598:1:exon
so has part: feature:7360015-7360130:1:exon
so has part: feature:7363361-7363531:1:exon
so has part: feature:7368988-7369200:1:exon
so has part: feature:7370713-7370825:1:exon
so has part: feature:7372611-7372737:1:exon
so has part: feature:7374518-7374643:1:exon
so has part: feature:7375148-7375264:1:exon
so has part: feature:7376094-7376233:1:exon
so has part: feature:7379995-7380166:1:exon
so has part: feature:7381760-7381859:1:exon
so has part: feature:7383815-7383903:1:exon
so has part: feature:7384483-7384600:1:exon
so has part: feature:7386186-7386282:1:exon
so has part: feature:7386911-7386979:1:exon
so has part: feature:7389090-7389278:1:exon
so has part: feature:7389862-7390101:1:exon
so has part: feature:7392348-7392492:1:exon
so has part: feature:7399136-7399290:1:exon
so has part: feature:7400650-7400869:1:exon
so has part: feature:7409799-7409927:1:exon
so has part: feature:7410394-7410504:1:exon
so has part: feature:7412406-7412564:1:exon
so has part: feature:7413724-7413795:1:exon
so has part: feature:7421568-7421757:1:exon
so has part: feature:7423148-7423239:1:exon
so has part: feature:7429179-7429272:1:exon
so has part: feature:7431609-7431801:1:exon
so has part: feature:7433343-7433433:1:exon
so has part: feature:7436587-7436740:1:exon
so has part: feature:7438886-7439023:1:exon
so has part: feature:7439335-7439552:1:exon
so has part: feature:7440159-7440264:1:exon
so has part: feature:7441223-7441320:1:exon
so has part: feature:7443009-7443086:1:exon
so has part: feature:7446404-7446530:1:exon
so has part: feature:7447583-7447785:1:exon
so has part: feature:7451875-7452142:1:exon
so has part: feature:7458120-7458223:1:exon
so has part: feature:7459257-7459326:1:exon
so has part: feature:7460447-7460759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7342571-7342902:1:exon

position:7342902:1
position: 7342902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7343228-7343415:1:exon

position:7343228:1
position: 7343228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7343415:1
position: 7343415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7344258-7344435:1:exon

position:7344258:1
position: 7344258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7344435:1
position: 7344435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7346342-7346431:1:exon

position:7346342:1
position: 7346342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7346431:1
position: 7346431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7348437-7348530:1:exon

position:7348437:1
position: 7348437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7348530:1
position: 7348530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7349880-7349994:1:exon

position:7349880:1
position: 7349880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7349994:1
position: 7349994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7350940-7351090:1:exon

position:7350940:1
position: 7350940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7351090:1
position: 7351090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7355149-7355314:1:exon

position:7355149:1
position: 7355149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7355314:1
position: 7355314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7357420-7357598:1:exon

position:7357420:1
position: 7357420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7357598:1
position: 7357598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7360015-7360130:1:exon

position:7360015:1
position: 7360015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7360130:1
position: 7360130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7363361-7363531:1:exon

position:7363361:1
position: 7363361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7363531:1
position: 7363531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7368988-7369200:1:exon

position:7368988:1
position: 7368988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7369200:1
position: 7369200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7370713-7370825:1:exon

position:7370713:1
position: 7370713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7370825:1
position: 7370825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7372611-7372737:1:exon

position:7372611:1
position: 7372611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7372737:1
position: 7372737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7374518-7374643:1:exon

position:7374518:1
position: 7374518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7374643:1
position: 7374643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7375148-7375264:1:exon

position:7375148:1
position: 7375148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7375264:1
position: 7375264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7376094-7376233:1:exon

position:7376094:1
position: 7376094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7376233:1
position: 7376233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7379995-7380166:1:exon

position:7379995:1
position: 7379995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7380166:1
position: 7380166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7381760-7381859:1:exon

position:7381760:1
position: 7381760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7381859:1
position: 7381859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7383815-7383903:1:exon

position:7383815:1
position: 7383815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7383903:1
position: 7383903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7384483-7384600:1:exon

position:7384483:1
position: 7384483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7384600:1
position: 7384600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7386186-7386282:1:exon

position:7386186:1
position: 7386186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7386282:1
position: 7386282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7386911-7386979:1:exon

position:7386911:1
position: 7386911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7386979:1
position: 7386979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7389090-7389278:1:exon

position:7389090:1
position: 7389090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7389278:1
position: 7389278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7389862-7390101:1:exon

position:7389862:1
position: 7389862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7390101:1
position: 7390101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7392348-7392492:1:exon

position:7392348:1
position: 7392348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7392492:1
position: 7392492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7399136-7399290:1:exon

position:7399136:1
position: 7399136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7399290:1
position: 7399290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7400650-7400869:1:exon

position:7400650:1
position: 7400650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7400869:1
position: 7400869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:7409799-7409927:1:exon

position:7409799:1
position: 7409799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7409927:1
position: 7409927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:7410394-7410504:1:exon

position:7410394:1
position: 7410394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7410504:1
position: 7410504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:7412406-7412564:1:exon

position:7412406:1
position: 7412406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7412564:1
position: 7412564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:7413724-7413795:1:exon

position:7413724:1
position: 7413724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7413795:1
position: 7413795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:7421568-7421757:1:exon

position:7421568:1
position: 7421568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7421757:1
position: 7421757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:7423148-7423239:1:exon

position:7423148:1
position: 7423148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7423239:1
position: 7423239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:7429179-7429272:1:exon

position:7429179:1
position: 7429179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7429272:1
position: 7429272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:7431609-7431801:1:exon

position:7431609:1
position: 7431609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7431801:1
position: 7431801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:7433343-7433433:1:exon

position:7433343:1
position: 7433343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7433433:1
position: 7433433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:7436587-7436740:1:exon

position:7436587:1
position: 7436587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7436740:1
position: 7436740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:7438886-7439023:1:exon

position:7438886:1
position: 7438886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7439023:1
position: 7439023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:7439335-7439552:1:exon

position:7439335:1
position: 7439335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7439552:1
position: 7439552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:7440159-7440264:1:exon

position:7440159:1
position: 7440159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7440264:1
position: 7440264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:7441223-7441320:1:exon

position:7441223:1
position: 7441223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7441320:1
position: 7441320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:7443009-7443086:1:exon

position:7443009:1
position: 7443009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7443086:1
position: 7443086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:7446404-7446530:1:exon

position:7446404:1
position: 7446404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7446530:1
position: 7446530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:7447583-7447785:1:exon

position:7447583:1
position: 7447583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7447785:1
position: 7447785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:7451875-7452142:1:exon

position:7451875:1
position: 7451875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7452142:1
position: 7452142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:7458120-7458223:1:exon

position:7458120:1
position: 7458120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7458223:1
position: 7458223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:7459257-7459326:1:exon

position:7459257:1
position: 7459257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7459326:1
position: 7459326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:7460447-7460759:1:exon

position:7460447:1
position: 7460447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RTTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: RTTN
product: rotatin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_027525763.1
SIO_010081: RTTN
subclass of: SO_0000673
so part of: RTTN
location: join(7342571..7342902,7343228..7343415,7344258..7344435,7346342..7346431,7348437..7348530,7349880..7349994,7350940..7351090,7355149..7355314,7357420..7357598,7360015..7360130,7363361..7363531,7368988..7369200,7370713..7370825,7372611..7372737,7374518..7374643,7375148..7375264,7376094..7376233,7379995..7380166,7381760..7381859,7383815..7383903,7384483..7384600,7386186..7386282,7386911..7386979,7389090..7389278,7389862..7390101,7392348..7392492,7409799..7409927,7410394..7410504,7412406..7412564,7413724..7413795,7421568..7421757,7423148..7423239,7429179..7429272,7431609..7431801,7433343..7433433,7436587..7436740,7438886..7439023,7439335..7439552,7440159..7440264,7441223..7441320,7443009..7443086,7446404..7446530,7447583..7447785,7451875..7452142,7458120..7458223,7459257..7459326,7460447..7460759)
location: region:7342571-7460759:1
so has part: feature:7342571-7342902:1:exon
so has part: feature:7343228-7343415:1:exon
so has part: feature:7344258-7344435:1:exon
so has part: feature:7346342-7346431:1:exon
so has part: feature:7348437-7348530:1:exon
so has part: feature:7349880-7349994:1:exon
so has part: feature:7350940-7351090:1:exon
so has part: feature:7355149-7355314:1:exon
so has part: feature:7357420-7357598:1:exon
so has part: feature:7360015-7360130:1:exon
so has part: feature:7363361-7363531:1:exon
so has part: feature:7368988-7369200:1:exon
so has part: feature:7370713-7370825:1:exon
so has part: feature:7372611-7372737:1:exon
so has part: feature:7374518-7374643:1:exon
so has part: feature:7375148-7375264:1:exon
so has part: feature:7376094-7376233:1:exon
so has part: feature:7379995-7380166:1:exon
so has part: feature:7381760-7381859:1:exon
so has part: feature:7383815-7383903:1:exon
so has part: feature:7384483-7384600:1:exon
so has part: feature:7386186-7386282:1:exon
so has part: feature:7386911-7386979:1:exon
so has part: feature:7389090-7389278:1:exon
so has part: feature:7389862-7390101:1:exon
so has part: feature:7392348-7392492:1:exon
so has part: feature:7409799-7409927:1:exon
so has part: feature:7410394-7410504:1:exon
so has part: feature:7412406-7412564:1:exon
so has part: feature:7413724-7413795:1:exon
so has part: feature:7421568-7421757:1:exon
so has part: feature:7423148-7423239:1:exon
so has part: feature:7429179-7429272:1:exon
so has part: feature:7431609-7431801:1:exon
so has part: feature:7433343-7433433:1:exon
so has part: feature:7436587-7436740:1:exon
so has part: feature:7438886-7439023:1:exon
so has part: feature:7439335-7439552:1:exon
so has part: feature:7440159-7440264:1:exon
so has part: feature:7441223-7441320:1:exon
so has part: feature:7443009-7443086:1:exon
so has part: feature:7446404-7446530:1:exon
so has part: feature:7447583-7447785:1:exon
so has part: feature:7451875-7452142:1:exon
so has part: feature:7458120-7458223:1:exon
so has part: feature:7459257-7459326:1:exon
so has part: feature:7460447-7460759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7342571-7342902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7343228-7343415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7344258-7344435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7346342-7346431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7348437-7348530:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7349880-7349994:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7350940-7351090:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355149-7355314:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7357420-7357598:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7360015-7360130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7363361-7363531:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7368988-7369200:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7370713-7370825:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7372611-7372737:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7374518-7374643:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7375148-7375264:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7376094-7376233:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7379995-7380166:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7381760-7381859:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7383815-7383903:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7384483-7384600:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7386186-7386282:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7386911-7386979:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7389090-7389278:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7389862-7390101:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7392348-7392492:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7409799-7409927:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7410394-7410504:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7412406-7412564:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7413724-7413795:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7421568-7421757:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7423148-7423239:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7429179-7429272:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7431609-7431801:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7433343-7433433:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7436587-7436740:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7438886-7439023:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7439335-7439552:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7440159-7440264:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:7441223-7441320:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:7443009-7443086:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:7446404-7446530:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:7447583-7447785:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:7451875-7452142:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:7458120-7458223:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:7459257-7459326:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:7460447-7460759:1:exon

RTTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: RTTN
product: rotatin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_027525762.1
SIO_010081: RTTN
subclass of: SO_0000673
so part of: RTTN
location: join(7342571..7342902,7343228..7343415,7344258..7344435,7346342..7346431,7348440..7348530,7349880..7349994,7350940..7351090,7355149..7355314,7357420..7357598,7360015..7360130,7363361..7363531,7368988..7369200,7370713..7370825,7372611..7372737,7374518..7374643,7375148..7375264,7376094..7376233,7379995..7380166,7381760..7381859,7383815..7383903,7384483..7384600,7386186..7386282,7386911..7386979,7389090..7389278,7389862..7390101,7392348..7392492,7399136..7399290,7400650..7400869,7409799..7409927,7410394..7410504,7412406..7412564,7413724..7413795,7421568..7421757,7423148..7423239,7429179..7429272,7431609..7431801,7433343..7433433,7436587..7436740,7438886..7439023,7439335..7439552,7440159..7440264,7441223..7441320,7443009..7443086,7446404..7446530,7447583..7447785,7451875..7452142,7458120..7458223,7459257..7459326,7460447..7460759)
location: region:7342571-7460759:1
so has part: feature:7342571-7342902:1:exon
so has part: feature:7343228-7343415:1:exon
so has part: feature:7344258-7344435:1:exon
so has part: feature:7346342-7346431:1:exon
so has part: feature:7348440-7348530:1:exon
so has part: feature:7349880-7349994:1:exon
so has part: feature:7350940-7351090:1:exon
so has part: feature:7355149-7355314:1:exon
so has part: feature:7357420-7357598:1:exon
so has part: feature:7360015-7360130:1:exon
so has part: feature:7363361-7363531:1:exon
so has part: feature:7368988-7369200:1:exon
so has part: feature:7370713-7370825:1:exon
so has part: feature:7372611-7372737:1:exon
so has part: feature:7374518-7374643:1:exon
so has part: feature:7375148-7375264:1:exon
so has part: feature:7376094-7376233:1:exon
so has part: feature:7379995-7380166:1:exon
so has part: feature:7381760-7381859:1:exon
so has part: feature:7383815-7383903:1:exon
so has part: feature:7384483-7384600:1:exon
so has part: feature:7386186-7386282:1:exon
so has part: feature:7386911-7386979:1:exon
so has part: feature:7389090-7389278:1:exon
so has part: feature:7389862-7390101:1:exon
so has part: feature:7392348-7392492:1:exon
so has part: feature:7399136-7399290:1:exon
so has part: feature:7400650-7400869:1:exon
so has part: feature:7409799-7409927:1:exon
so has part: feature:7410394-7410504:1:exon
so has part: feature:7412406-7412564:1:exon
so has part: feature:7413724-7413795:1:exon
so has part: feature:7421568-7421757:1:exon
so has part: feature:7423148-7423239:1:exon
so has part: feature:7429179-7429272:1:exon
so has part: feature:7431609-7431801:1:exon
so has part: feature:7433343-7433433:1:exon
so has part: feature:7436587-7436740:1:exon
so has part: feature:7438886-7439023:1:exon
so has part: feature:7439335-7439552:1:exon
so has part: feature:7440159-7440264:1:exon
so has part: feature:7441223-7441320:1:exon
so has part: feature:7443009-7443086:1:exon
so has part: feature:7446404-7446530:1:exon
so has part: feature:7447583-7447785:1:exon
so has part: feature:7451875-7452142:1:exon
so has part: feature:7458120-7458223:1:exon
so has part: feature:7459257-7459326:1:exon
so has part: feature:7460447-7460759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7342571-7342902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7343228-7343415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7344258-7344435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7346342-7346431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7348440-7348530:1:exon

position:7348440:1
position: 7348440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7349880-7349994:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7350940-7351090:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355149-7355314:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7357420-7357598:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7360015-7360130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7363361-7363531:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7368988-7369200:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7370713-7370825:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7372611-7372737:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7374518-7374643:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7375148-7375264:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7376094-7376233:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7379995-7380166:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7381760-7381859:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7383815-7383903:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7384483-7384600:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7386186-7386282:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7386911-7386979:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7389090-7389278:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7389862-7390101:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7392348-7392492:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7399136-7399290:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7400650-7400869:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7409799-7409927:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7410394-7410504:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7412406-7412564:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7413724-7413795:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7421568-7421757:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7423148-7423239:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7429179-7429272:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7431609-7431801:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7433343-7433433:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7436587-7436740:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7438886-7439023:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:7439335-7439552:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:7440159-7440264:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:7441223-7441320:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:7443009-7443086:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:7446404-7446530:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:7447583-7447785:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:7451875-7452142:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:7458120-7458223:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:7459257-7459326:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:7460447-7460759:1:exon

RTTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: RTTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rotatin isoform X1
translation: MVLTGLIRKLGHPLAEIRERALRSILCKLEHSLVCGADLASHRLLFLHLLEWFNFPSVPVKDEVLGLLSRLVKYPLAVQHLVDLGAVEFLSKLRPNVEPNLQAEIDGILDGLFSLPSEVPEMYSSSYQTSQTDLLQQPEILTGYFPQDKSTLQQTEIPSRPVAANPTAKCLKFSTFPWLPLTAADRHVLSSNESSLRSSNHTVIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKLAFGGDGKHRLALQSVSCLQQLCTCLRNRLNFHRDPSFFSNKQDAVSQNSSLSYCPDARAAPHSQNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAASSSGSSSHAHVSSRVSAPSPLDLAPVDLPELAEDALELQLQQLSLPQLCVSLLEAAAPLLRTGSRQMIIRVLELLAEVVVLIGEAISAHLWDDSSLFAIDMKEKLLVVLASLGDTVCYHKSSVSLEQPEALVVHHRMAFVSISLFAVRLLQTLLPVEKASRFLPEPMSAALFFISLDMPVSLEYPNIHEAVVAYLEQLNSENYSIYKRTAEAAYSIECTCNFLSDVGKEGEKNLSELVELADQALRSFSYHQHFPLIKEIISICSKIWKSVQASPLLQGESQKVFLRMLSHPLLQVKVETYHCCLEIVKECLGIHNISKPVSSLCNGIHFLLHPKVLYEISAFGIQDPKNEVSAAAKAILVHLLQGRLRVSAPTWNKFIESLCPVIPVLQGYADTENPLGNCILHLSRESPETDEGVLPSATRLKSMLRLLLVKKPSVRVLALKLLASHLTREEGSDTKRPSIDARVLSRVTNLFIVKKPIELKLDDRRELMIKLETVEKVYGIFVSDDIDLVLRKSAAEQLVVIMQDIKMHAVVKKVHLVDKIIEYLSECVGQDGEVVECLVQPSLMLLRKVLCADPVLRESLSQKTSVLTLLFRVSLIFHEDCTIVTEVGALFCLLLFDEVSRMDMWSDSPSCTPSSPSVFSLPVSVSRRYHLPVHVVGHHAVSPYSMVLPLSADSLALKPVSDMLRMAWNLSWYHGSDNVLKQVNSEAEIQEFLDTLKLSTEDTLTLKMTHTPSGLKDCLCSIVQAAGHREVRAALTRMSFYLLNDRLSFKGGTGPCGVTLKSLSWHTTLNRFLQVLPACTEDEKLLIDIIHFLSKLLKEQRKNVPVELLNWLLEVLLRQSPNPLLDLLVLTESQTREETDDVRTAVRQQLQKELIALFSTLLLSFEAVTDRKCLELFYVFQTQLALKLLQCLRVTDAPHFYGLPSLERTLRGMAHLTACPGWSAHSPLTKPLDICGKYLSGLLEVITSFYVERGGNAMSFMGKGVTKSTVLCLLHLSHEMMAQAQSSGWMSLWFLPLGSQSEDHAPTQQGLAWLIPLWVDRDPEVRFTSLGLGSALTTLETGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFIFQNLLVIPMPSVIIKDYTWQGPCVHDEDSGLSLIGKPALQALLYHCHFYEHLNQMVKHCYLGRYAFDFSFSALNGAPEGNDLNGLDDSFKFWRAPSRMSSQDRDPSSLSTSETMVAASSGSAEFQSLVLSMVPHPEVTHDQLVAQGQREAASPRLPPDSPLSAPLPRQCVFVTPPLLSAMCSLLDSLLVATPGDTAGAFRRTRLIELLCSIAVATLLETSVQELQASLPTSLPAEHTQAQVSFLLEYLSSLSRLLQSCLLVDPDLVIQDELLKPLIPNIIQVLTLCTKDILDVELRSAFYQTWTHLFNLLAALLRRAGPASFPYVTLGLARSWAAVIDTFCRCARLSTTSPALYTASLQFLSVLLTEEAKRRLQDEEKTSLCHSPTVASLLDKTQESQNSLERLTEVILQCYEGKTSKDVLKRVAANALMSLLAVSRRAQRHALKAHLVDSCVEQMKHIHAQLNLGSLKPGRAALRKKEDGFIKELSIAMQLLRNCLYQNEECKGAALDAHLAPVLHALWPWLLMDDSLMQVALQLLCVYTANFPNGCSSLCWSSYGQHP…
SIO_010081: RTTN
subclass of: SO_0000673
so part of: RTTN
location: join(7342872..7342902,7343228..7343415,7344258..7344435,7346342..7346431,7348437..7348530,7349880..7349994,7350940..7351090,7355149..7355314,7357420..7357598,7360015..7360130,7363361..7363531,7368988..7369200,7370713..7370825,7372611..7372737,7374518..7374643,7375148..7375264,7376094..7376233,7379995..7380166,7381760..7381859,7383815..7383903,7384483..7384600,7386186..7386282,7386911..7386979,7389090..7389278,7389862..7390101,7392348..7392492,7399136..7399290,7400650..7400869,7409799..7409927,7410394..7410504,7412406..7412564,7413724..7413795,7421568..7421757,7423148..7423239,7429179..7429272,7431609..7431801,7433343..7433433,7436587..7436740,7438886..7439023,7439335..7439552,7440159..7440264,7441223..7441320,7443009..7443086,7446404..7446530,7447583..7447785,7451875..7452142,7458120..7458223,7459257..7459326,7460447..7460532)
location: region:7342872-7460532:1
so has part: feature:7342872-7342902:1:exon
so has part: feature:7343228-7343415:1:exon
so has part: feature:7344258-7344435:1:exon
so has part: feature:7346342-7346431:1:exon
so has part: feature:7348437-7348530:1:exon
so has part: feature:7349880-7349994:1:exon
so has part: feature:7350940-7351090:1:exon
so has part: feature:7355149-7355314:1:exon
so has part: feature:7357420-7357598:1:exon
so has part: feature:7360015-7360130:1:exon
so has part: feature:7363361-7363531:1:exon
so has part: feature:7368988-7369200:1:exon
so has part: feature:7370713-7370825:1:exon
so has part: feature:7372611-7372737:1:exon
so has part: feature:7374518-7374643:1:exon
so has part: feature:7375148-7375264:1:exon
so has part: feature:7376094-7376233:1:exon
so has part: feature:7379995-7380166:1:exon
so has part: feature:7381760-7381859:1:exon
so has part: feature:7383815-7383903:1:exon
so has part: feature:7384483-7384600:1:exon
so has part: feature:7386186-7386282:1:exon
so has part: feature:7386911-7386979:1:exon
so has part: feature:7389090-7389278:1:exon
so has part: feature:7389862-7390101:1:exon
so has part: feature:7392348-7392492:1:exon
so has part: feature:7399136-7399290:1:exon
so has part: feature:7400650-7400869:1:exon
so has part: feature:7409799-7409927:1:exon
so has part: feature:7410394-7410504:1:exon
so has part: feature:7412406-7412564:1:exon
so has part: feature:7413724-7413795:1:exon
so has part: feature:7421568-7421757:1:exon
so has part: feature:7423148-7423239:1:exon
so has part: feature:7429179-7429272:1:exon
so has part: feature:7431609-7431801:1:exon
so has part: feature:7433343-7433433:1:exon
so has part: feature:7436587-7436740:1:exon
so has part: feature:7438886-7439023:1:exon
so has part: feature:7439335-7439552:1:exon
so has part: feature:7440159-7440264:1:exon
so has part: feature:7441223-7441320:1:exon
so has part: feature:7443009-7443086:1:exon
so has part: feature:7446404-7446530:1:exon
so has part: feature:7447583-7447785:1:exon
so has part: feature:7451875-7452142:1:exon
so has part: feature:7458120-7458223:1:exon
so has part: feature:7459257-7459326:1:exon
so has part: feature:7460447-7460532:1:exon

XP_027381562.1
type: Protein
SIO_000068: ncbiprotein

position:7342872:1
position: 7342872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7460532:1
position: 7460532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7342872-7342902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7343228-7343415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7344258-7344435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7346342-7346431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7348437-7348530:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7349880-7349994:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7350940-7351090:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355149-7355314:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7357420-7357598:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7360015-7360130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7363361-7363531:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7368988-7369200:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7370713-7370825:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7372611-7372737:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7374518-7374643:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7375148-7375264:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7376094-7376233:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7379995-7380166:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7381760-7381859:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7383815-7383903:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7384483-7384600:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7386186-7386282:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7386911-7386979:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7389090-7389278:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7389862-7390101:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7392348-7392492:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7399136-7399290:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7400650-7400869:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7409799-7409927:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7410394-7410504:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7412406-7412564:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7413724-7413795:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7421568-7421757:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7423148-7423239:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7429179-7429272:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7431609-7431801:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7433343-7433433:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7436587-7436740:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7438886-7439023:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:7439335-7439552:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:7440159-7440264:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:7441223-7441320:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:7443009-7443086:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:7446404-7446530:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:7447583-7447785:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:7451875-7452142:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:7458120-7458223:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:7459257-7459326:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:7460447-7460532:1:exon

RTTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: RTTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rotatin isoform X3
translation: MVLTGLIRKLGHPLAEIRERALRSILCKLEHSLVCGADLASHRLLFLHLLEWFNFPSVPVKDEVLGLLSRLVKYPLAVQHLVDLGAVEFLSKLRPNVEPNLQAEIDGILDGLFSLPSEVPEMYSSSYQTSQTDLLQQPEILTGYFPQDKSTLQQTEIPSRPVAANPTAKCLKFSTFPWLPLTAADRHVLSSNESSLRSSNHTVIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKLAFGGDGKHRLALQSVSCLQQLCTCLRNRLNFHRDPSFFSNKQDAVSQNSSLSYCPDARAAPHSQNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAASSSGSSSHAHVSSRVSAPSPLDLAPVDLPELAEDALELQLQQLSLPQLCVSLLEAAAPLLRTGSRQMIIRVLELLAEVVVLIGEAISAHLWDDSSLFAIDMKEKLLVVLASLGDTVCYHKSSVSLEQPEALVVHHRMAFVSISLFAVRLLQTLLPVEKASRFLPEPMSAALFFISLDMPVSLEYPNIHEAVVAYLEQLNSENYSIYKRTAEAAYSIECTCNFLSDVGKEGEKNLSELVELADQALRSFSYHQHFPLIKEIISICSKIWKSVQASPLLQGESQKVFLRMLSHPLLQVKVETYHCCLEIVKECLGIHNISKPVSSLCNGIHFLLHPKVLYEISAFGIQDPKNEVSAAAKAILVHLLQGRLRVSAPTWNKFIESLCPVIPVLQGYADTENPLGNCILHLSRESPETDEGVLPSATRLKSMLRLLLVKKPSVRVLALKLLASHLTREEGSDTKRPSIDARVLSRVTNLFIVKKPIELKLDDRRELMIKLETVEKVYGIFVSDDIDLVLRKSAAEQLVVIMQDIKMHAVVKKVHLVDKIIEYLSECVGQDGEVVECLVQPSLMLLRKVLCADPVLRESLSQKTSVLTLLFRVSLIFHEDCTIVTEVGALFCLLLFDEVSRMDMWSDSPSCTPSSPSVFSLPVSVSRRYHLPVHVVGHHAVSPYSMVLPLSADSLALKPVSDMLRMAWNLSWYHGSDNVLKQVNSEAEIQEFLDTLKLSTEDTLTLKMTHTPSGLKDCLCSIVQAAGHREVRAALTRMSFYLLNDRLSFKGGTGPCGVTLKSLSWHTTLNRFLQVLPACTEDEKLLIDIIHFLSKLLKEQRKNVPVELLNWLLEVLLRQVITSFYVERGGNAMSFMGKGVTKSTVLCLLHLSHEMMAQAQSSGWMSLWFLPLGSQSEDHAPTQQGLAWLIPLWVDRDPEVRFTSLGLGSALTTLETGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFIFQNLLVIPMPSVIIKDYTWQGPCVHDEDSGLSLIGKPALQALLYHCHFYEHLNQMVKHCYLGRYAFDFSFSALNGAPEGNDLNGLDDSFKFWRAPSRMSSQDRDPSSLSTSETMVAASSGSAEFQSLVLSMVPHPEVTHDQLVAQGQREAASPRLPPDSPLSAPLPRQCVFVTPPLLSAMCSLLDSLLVATPGDTAGAFRRTRLIELLCSIAVATLLETSVQELQASLPTSLPAEHTQAQVSFLLEYLSSLSRLLQSCLLVDPDLVIQDELLKPLIPNIIQVLTLCTKDILDVELRSAFYQTWTHLFNLLAALLRRAGPASFPYVTLGLARSWAAVIDTFCRCARLSTTSPALYTASLQFLSVLLTEEAKRRLQDEEKTSLCHSPTVASLLDKTQESQNSLERLTEVILQCYEGKTSKDVLKRVAANALMSLLAVSRRAQRHALKAHLVDSCVEQMKHIHAQLNLGSLKPGRAALRKKEDGFIKELSIAMQLLRNCLYQNEECKGAALDAHLAPVLHALWPWLLMDDSLMQVALQLLCVYTANFPNGCSSLCWSSYGQHPVQAAHRGAPGSSLMLCILKMASQVPPENTAVQQAVFMILSNLALSHDCKGVIQKSNFLQNFLSLTLPKGGNKHLSNLSVLWLKLLLNMSFEEDGQQVILRLDGCLDLLTEMSRFKHKSSLSIPLL…
SIO_010081: RTTN
subclass of: SO_0000673
so part of: RTTN
location: join(7342872..7342902,7343228..7343415,7344258..7344435,7346342..7346431,7348437..7348530,7349880..7349994,7350940..7351090,7355149..7355314,7357420..7357598,7360015..7360130,7363361..7363531,7368988..7369200,7370713..7370825,7372611..7372737,7374518..7374643,7375148..7375264,7376094..7376233,7379995..7380166,7381760..7381859,7383815..7383903,7384483..7384600,7386186..7386282,7386911..7386979,7389090..7389278,7389862..7390101,7392348..7392492,7409799..7409927,7410394..7410504,7412406..7412564,7413724..7413795,7421568..7421757,7423148..7423239,7429179..7429272,7431609..7431801,7433343..7433433,7436587..7436740,7438886..7439023,7439335..7439552,7440159..7440264,7441223..7441320,7443009..7443086,7446404..7446530,7447583..7447785,7451875..7452142,7458120..7458223,7459257..7459326,7460447..7460532)
location: region:7342872-7460532:1
so has part: feature:7342872-7342902:1:exon
so has part: feature:7343228-7343415:1:exon
so has part: feature:7344258-7344435:1:exon
so has part: feature:7346342-7346431:1:exon
so has part: feature:7348437-7348530:1:exon
so has part: feature:7349880-7349994:1:exon
so has part: feature:7350940-7351090:1:exon
so has part: feature:7355149-7355314:1:exon
so has part: feature:7357420-7357598:1:exon
so has part: feature:7360015-7360130:1:exon
so has part: feature:7363361-7363531:1:exon
so has part: feature:7368988-7369200:1:exon
so has part: feature:7370713-7370825:1:exon
so has part: feature:7372611-7372737:1:exon
so has part: feature:7374518-7374643:1:exon
so has part: feature:7375148-7375264:1:exon
so has part: feature:7376094-7376233:1:exon
so has part: feature:7379995-7380166:1:exon
so has part: feature:7381760-7381859:1:exon
so has part: feature:7383815-7383903:1:exon
so has part: feature:7384483-7384600:1:exon
so has part: feature:7386186-7386282:1:exon
so has part: feature:7386911-7386979:1:exon
so has part: feature:7389090-7389278:1:exon
so has part: feature:7389862-7390101:1:exon
so has part: feature:7392348-7392492:1:exon
so has part: feature:7409799-7409927:1:exon
so has part: feature:7410394-7410504:1:exon
so has part: feature:7412406-7412564:1:exon
so has part: feature:7413724-7413795:1:exon
so has part: feature:7421568-7421757:1:exon
so has part: feature:7423148-7423239:1:exon
so has part: feature:7429179-7429272:1:exon
so has part: feature:7431609-7431801:1:exon
so has part: feature:7433343-7433433:1:exon
so has part: feature:7436587-7436740:1:exon
so has part: feature:7438886-7439023:1:exon
so has part: feature:7439335-7439552:1:exon
so has part: feature:7440159-7440264:1:exon
so has part: feature:7441223-7441320:1:exon
so has part: feature:7443009-7443086:1:exon
so has part: feature:7446404-7446530:1:exon
so has part: feature:7447583-7447785:1:exon
so has part: feature:7451875-7452142:1:exon
so has part: feature:7458120-7458223:1:exon
so has part: feature:7459257-7459326:1:exon
so has part: feature:7460447-7460532:1:exon

XP_027381564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7342872-7342902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7343228-7343415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7344258-7344435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7346342-7346431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7348437-7348530:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7349880-7349994:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7350940-7351090:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355149-7355314:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7357420-7357598:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7360015-7360130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7363361-7363531:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7368988-7369200:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7370713-7370825:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7372611-7372737:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7374518-7374643:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7375148-7375264:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7376094-7376233:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7379995-7380166:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7381760-7381859:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7383815-7383903:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7384483-7384600:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7386186-7386282:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7386911-7386979:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7389090-7389278:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7389862-7390101:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7392348-7392492:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7409799-7409927:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7410394-7410504:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7412406-7412564:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7413724-7413795:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7421568-7421757:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7423148-7423239:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7429179-7429272:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7431609-7431801:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7433343-7433433:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7436587-7436740:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7438886-7439023:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7439335-7439552:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7440159-7440264:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:7441223-7441320:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:7443009-7443086:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:7446404-7446530:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:7447583-7447785:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:7451875-7452142:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:7458120-7458223:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:7459257-7459326:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:7460447-7460532:1:exon

RTTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: RTTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rotatin isoform X2
translation: MVLTGLIRKLGHPLAEIRERALRSILCKLEHSLVCGADLASHRLLFLHLLEWFNFPSVPVKDEVLGLLSRLVKYPLAVQHLVDLGAVEFLSKLRPNVEPNLQAEIDGILDGLFSLPSEVPEMYSSSYQTSQTDLLQQPEILTGYFPQDKSTLQQTEIPSRPVANPTAKCLKFSTFPWLPLTAADRHVLSSNESSLRSSNHTVIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKLAFGGDGKHRLALQSVSCLQQLCTCLRNRLNFHRDPSFFSNKQDAVSQNSSLSYCPDARAAPHSQNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAASSSGSSSHAHVSSRVSAPSPLDLAPVDLPELAEDALELQLQQLSLPQLCVSLLEAAAPLLRTGSRQMIIRVLELLAEVVVLIGEAISAHLWDDSSLFAIDMKEKLLVVLASLGDTVCYHKSSVSLEQPEALVVHHRMAFVSISLFAVRLLQTLLPVEKASRFLPEPMSAALFFISLDMPVSLEYPNIHEAVVAYLEQLNSENYSIYKRTAEAAYSIECTCNFLSDVGKEGEKNLSELVELADQALRSFSYHQHFPLIKEIISICSKIWKSVQASPLLQGESQKVFLRMLSHPLLQVKVETYHCCLEIVKECLGIHNISKPVSSLCNGIHFLLHPKVLYEISAFGIQDPKNEVSAAAKAILVHLLQGRLRVSAPTWNKFIESLCPVIPVLQGYADTENPLGNCILHLSRESPETDEGVLPSATRLKSMLRLLLVKKPSVRVLALKLLASHLTREEGSDTKRPSIDARVLSRVTNLFIVKKPIELKLDDRRELMIKLETVEKVYGIFVSDDIDLVLRKSAAEQLVVIMQDIKMHAVVKKVHLVDKIIEYLSECVGQDGEVVECLVQPSLMLLRKVLCADPVLRESLSQKTSVLTLLFRVSLIFHEDCTIVTEVGALFCLLLFDEVSRMDMWSDSPSCTPSSPSVFSLPVSVSRRYHLPVHVVGHHAVSPYSMVLPLSADSLALKPVSDMLRMAWNLSWYHGSDNVLKQVNSEAEIQEFLDTLKLSTEDTLTLKMTHTPSGLKDCLCSIVQAAGHREVRAALTRMSFYLLNDRLSFKGGTGPCGVTLKSLSWHTTLNRFLQVLPACTEDEKLLIDIIHFLSKLLKEQRKNVPVELLNWLLEVLLRQSPNPLLDLLVLTESQTREETDDVRTAVRQQLQKELIALFSTLLLSFEAVTDRKCLELFYVFQTQLALKLLQCLRVTDAPHFYGLPSLERTLRGMAHLTACPGWSAHSPLTKPLDICGKYLSGLLEVITSFYVERGGNAMSFMGKGVTKSTVLCLLHLSHEMMAQAQSSGWMSLWFLPLGSQSEDHAPTQQGLAWLIPLWVDRDPEVRFTSLGLGSALTTLETGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFIFQNLLVIPMPSVIIKDYTWQGPCVHDEDSGLSLIGKPALQALLYHCHFYEHLNQMVKHCYLGRYAFDFSFSALNGAPEGNDLNGLDDSFKFWRAPSRMSSQDRDPSSLSTSETMVAASSGSAEFQSLVLSMVPHPEVTHDQLVAQGQREAASPRLPPDSPLSAPLPRQCVFVTPPLLSAMCSLLDSLLVATPGDTAGAFRRTRLIELLCSIAVATLLETSVQELQASLPTSLPAEHTQAQVSFLLEYLSSLSRLLQSCLLVDPDLVIQDELLKPLIPNIIQVLTLCTKDILDVELRSAFYQTWTHLFNLLAALLRRAGPASFPYVTLGLARSWAAVIDTFCRCARLSTTSPALYTASLQFLSVLLTEEAKRRLQDEEKTSLCHSPTVASLLDKTQESQNSLERLTEVILQCYEGKTSKDVLKRVAANALMSLLAVSRRAQRHALKAHLVDSCVEQMKHIHAQLNLGSLKPGRAALRKKEDGFIKELSIAMQLLRNCLYQNEECKGAALDAHLAPVLHALWPWLLMDDSLMQVALQLLCVYTANFPNGCSSLCWSSYGQHPV…
SIO_010081: RTTN
subclass of: SO_0000673
so part of: RTTN
location: join(7342872..7342902,7343228..7343415,7344258..7344435,7346342..7346431,7348440..7348530,7349880..7349994,7350940..7351090,7355149..7355314,7357420..7357598,7360015..7360130,7363361..7363531,7368988..7369200,7370713..7370825,7372611..7372737,7374518..7374643,7375148..7375264,7376094..7376233,7379995..7380166,7381760..7381859,7383815..7383903,7384483..7384600,7386186..7386282,7386911..7386979,7389090..7389278,7389862..7390101,7392348..7392492,7399136..7399290,7400650..7400869,7409799..7409927,7410394..7410504,7412406..7412564,7413724..7413795,7421568..7421757,7423148..7423239,7429179..7429272,7431609..7431801,7433343..7433433,7436587..7436740,7438886..7439023,7439335..7439552,7440159..7440264,7441223..7441320,7443009..7443086,7446404..7446530,7447583..7447785,7451875..7452142,7458120..7458223,7459257..7459326,7460447..7460532)
location: region:7342872-7460532:1
so has part: feature:7342872-7342902:1:exon
so has part: feature:7343228-7343415:1:exon
so has part: feature:7344258-7344435:1:exon
so has part: feature:7346342-7346431:1:exon
so has part: feature:7348440-7348530:1:exon
so has part: feature:7349880-7349994:1:exon
so has part: feature:7350940-7351090:1:exon
so has part: feature:7355149-7355314:1:exon
so has part: feature:7357420-7357598:1:exon
so has part: feature:7360015-7360130:1:exon
so has part: feature:7363361-7363531:1:exon
so has part: feature:7368988-7369200:1:exon
so has part: feature:7370713-7370825:1:exon
so has part: feature:7372611-7372737:1:exon
so has part: feature:7374518-7374643:1:exon
so has part: feature:7375148-7375264:1:exon
so has part: feature:7376094-7376233:1:exon
so has part: feature:7379995-7380166:1:exon
so has part: feature:7381760-7381859:1:exon
so has part: feature:7383815-7383903:1:exon
so has part: feature:7384483-7384600:1:exon
so has part: feature:7386186-7386282:1:exon
so has part: feature:7386911-7386979:1:exon
so has part: feature:7389090-7389278:1:exon
so has part: feature:7389862-7390101:1:exon
so has part: feature:7392348-7392492:1:exon
so has part: feature:7399136-7399290:1:exon
so has part: feature:7400650-7400869:1:exon
so has part: feature:7409799-7409927:1:exon
so has part: feature:7410394-7410504:1:exon
so has part: feature:7412406-7412564:1:exon
so has part: feature:7413724-7413795:1:exon
so has part: feature:7421568-7421757:1:exon
so has part: feature:7423148-7423239:1:exon
so has part: feature:7429179-7429272:1:exon
so has part: feature:7431609-7431801:1:exon
so has part: feature:7433343-7433433:1:exon
so has part: feature:7436587-7436740:1:exon
so has part: feature:7438886-7439023:1:exon
so has part: feature:7439335-7439552:1:exon
so has part: feature:7440159-7440264:1:exon
so has part: feature:7441223-7441320:1:exon
so has part: feature:7443009-7443086:1:exon
so has part: feature:7446404-7446530:1:exon
so has part: feature:7447583-7447785:1:exon
so has part: feature:7451875-7452142:1:exon
so has part: feature:7458120-7458223:1:exon
so has part: feature:7459257-7459326:1:exon
so has part: feature:7460447-7460532:1:exon

XP_027381563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7342872-7342902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7343228-7343415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7344258-7344435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7346342-7346431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7348440-7348530:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7349880-7349994:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7350940-7351090:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7355149-7355314:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7357420-7357598:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7360015-7360130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7363361-7363531:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7368988-7369200:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7370713-7370825:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7372611-7372737:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7374518-7374643:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7375148-7375264:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7376094-7376233:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7379995-7380166:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7381760-7381859:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7383815-7383903:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7384483-7384600:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7386186-7386282:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7386911-7386979:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7389090-7389278:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7389862-7390101:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7392348-7392492:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7399136-7399290:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7400650-7400869:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7409799-7409927:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7410394-7410504:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7412406-7412564:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7413724-7413795:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7421568-7421757:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7423148-7423239:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7429179-7429272:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7431609-7431801:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7433343-7433433:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7436587-7436740:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7438886-7439023:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:7439335-7439552:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:7440159-7440264:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:7441223-7441320:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:7443009-7443086:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:7446404-7446530:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:7447583-7447785:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:7451875-7452142:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:7458120-7458223:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:7459257-7459326:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:7460447-7460532:1:exon

CD226
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: CD226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7495304..7605659
location: region:7495304-7605659:1
so has part: feature:7495304-7605659:1:exon
subclass of: SO_0000010

113882867
type: Gene
SIO_000068: ncbigene

position:7495304:1
position: 7495304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7605659:1
position: 7605659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7495304-7605659:1:exon

CD226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CD226
product: CD226 molecule, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027526036.1
SIO_010081: CD226
subclass of: SO_0000673
so part of: CD226
location: join(7495304..7495483,7522679..7522842,7523151..7523486,7577287..7577634,7597078..7597180,7602433..7602490,7604819..7605659)
location: region:7495304-7605659:1
so has part: feature:7495304-7495483:1:exon
so has part: feature:7522679-7522842:1:exon
so has part: feature:7523151-7523486:1:exon
so has part: feature:7577287-7577634:1:exon
so has part: feature:7597078-7597180:1:exon
so has part: feature:7602433-7602490:1:exon
so has part: feature:7604819-7605659:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7495304-7495483:1:exon

position:7495483:1
position: 7495483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7522679-7522842:1:exon

position:7522679:1
position: 7522679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7522842:1
position: 7522842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7523151-7523486:1:exon

position:7523151:1
position: 7523151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7523486:1
position: 7523486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7577287-7577634:1:exon

position:7577287:1
position: 7577287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7577634:1
position: 7577634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7597078-7597180:1:exon

position:7597078:1
position: 7597078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7597180:1
position: 7597180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7602433-7602490:1:exon

position:7602433:1
position: 7602433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7602490:1
position: 7602490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7604819-7605659:1:exon

position:7604819:1
position: 7604819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CD226
product: CD226 molecule, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_027526037.1
SIO_010081: CD226
subclass of: SO_0000673
so part of: CD226
location: join(7498577..7499315,7522679..7522842,7523151..7523486,7577287..7577634,7597078..7597180,7602433..7602490,7604819..7605659)
location: region:7498577-7605659:1
so has part: feature:7498577-7499315:1:exon
so has part: feature:7522679-7522842:1:exon
so has part: feature:7523151-7523486:1:exon
so has part: feature:7577287-7577634:1:exon
so has part: feature:7597078-7597180:1:exon
so has part: feature:7602433-7602490:1:exon
so has part: feature:7604819-7605659:1:exon

position:7498577:1
position: 7498577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7498577-7499315:1:exon

position:7499315:1
position: 7499315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7522679-7522842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7523151-7523486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7577287-7577634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7597078-7597180:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7602433-7602490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7604819-7605659:1:exon

CD226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CD226
product: CD226 molecule, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_027526035.1
SIO_010081: CD226
subclass of: SO_0000673
so part of: CD226
location: join(7517352..7517969,7522679..7522842,7523151..7523486,7577287..7577634,7597078..7597180,7602433..7602490,7604819..7605659)
location: region:7517352-7605659:1
so has part: feature:7517352-7517969:1:exon
so has part: feature:7522679-7522842:1:exon
so has part: feature:7523151-7523486:1:exon
so has part: feature:7577287-7577634:1:exon
so has part: feature:7597078-7597180:1:exon
so has part: feature:7602433-7602490:1:exon
so has part: feature:7604819-7605659:1:exon

position:7517352:1
position: 7517352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7517352-7517969:1:exon

position:7517969:1
position: 7517969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7522679-7522842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7523151-7523486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7577287-7577634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7597078-7597180:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7602433-7602490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7604819-7605659:1:exon

CD226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CD226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD226 antigen
translation: MDHLTLLLAILYVYTAPCEEIFWDTTVKLAKNMTLECVYPLADTVTQMEWFKIKMERESMAIFNPAFHGIIREAYTDRVYFSNHTMASNDMTLSFHNASEADVGFYSCLLHTFPHGTWEKVIQVVPPDNFEDAGPPNSQMVSEPGKNITLTCEPRENHLLEEVSWEKIQPQQIDLLISCNLSQGRNYTSKYPRQILSNCNKGMKKAFVTMPNVIGSDSGLYRCGFKASTGEKETFVMRLTVTNGETKNSYIPFVAGGAVLLFLLVILITTITVITYKRKKRQQKRGLFKDVWITQNRATNNYRNPFPPNPPAGGAGEDIYVNHPVFCLGPRARV
SIO_010081: CD226
subclass of: SO_0000673
so part of: CD226
location: join(7522797..7522842,7523151..7523486,7577287..7577634,7597078..7597180,7602433..7602490,7604819..7604932)
location: region:7522797-7604932:1
so has part: feature:7522797-7522842:1:exon
so has part: feature:7523151-7523486:1:exon
so has part: feature:7577287-7577634:1:exon
so has part: feature:7597078-7597180:1:exon
so has part: feature:7602433-7602490:1:exon
so has part: feature:7604819-7604932:1:exon

XP_027381836.1
type: Protein
SIO_000068: ncbiprotein

position:7522797:1
position: 7522797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7604932:1
position: 7604932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7522797-7522842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7523151-7523486:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7577287-7577634:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7597078-7597180:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7602433-7602490:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7604819-7604932:1:exon

CD226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CD226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD226 antigen
translation: MDHLTLLLAILYVYTAPCEEIFWDTTVKLAKNMTLECVYPLADTVTQMEWFKIKMERESMAIFNPAFHGIIREAYTDRVYFSNHTMASNDMTLSFHNASEADVGFYSCLLHTFPHGTWEKVIQVVPPDNFEDAGPPNSQMVSEPGKNITLTCEPRENHLLEEVSWEKIQPQQIDLLISCNLSQGRNYTSKYPRQILSNCNKGMKKAFVTMPNVIGSDSGLYRCGFKASTGEKETFVMRLTVTNGETKNSYIPFVAGGAVLLFLLVILITTITVITYKRKKRQQKRGLFKDVWITQNRATNNYRNPFPPNPPAGGAGEDIYVNHPVFCLGPRARV
SIO_010081: CD226
subclass of: SO_0000673
so part of: CD226
location: join(7522797..7522842,7523151..7523486,7577287..7577634,7597078..7597180,7602433..7602490,7604819..7604932)
location: region:7522797-7604932:1
so has part: feature:7522797-7522842:1:exon
so has part: feature:7523151-7523486:1:exon
so has part: feature:7577287-7577634:1:exon
so has part: feature:7597078-7597180:1:exon
so has part: feature:7602433-7602490:1:exon
so has part: feature:7604819-7604932:1:exon

XP_027381837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7522797-7522842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7523151-7523486:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7577287-7577634:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7597078-7597180:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7602433-7602490:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7604819-7604932:1:exon

CD226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CD226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD226 antigen
translation: MDHLTLLLAILYVYTAPCEEIFWDTTVKLAKNMTLECVYPLADTVTQMEWFKIKMERESMAIFNPAFHGIIREAYTDRVYFSNHTMASNDMTLSFHNASEADVGFYSCLLHTFPHGTWEKVIQVVPPDNFEDAGPPNSQMVSEPGKNITLTCEPRENHLLEEVSWEKIQPQQIDLLISCNLSQGRNYTSKYPRQILSNCNKGMKKAFVTMPNVIGSDSGLYRCGFKASTGEKETFVMRLTVTNGETKNSYIPFVAGGAVLLFLLVILITTITVITYKRKKRQQKRGLFKDVWITQNRATNNYRNPFPPNPPAGGAGEDIYVNHPVFCLGPRARV
SIO_010081: CD226
subclass of: SO_0000673
so part of: CD226
location: join(7522797..7522842,7523151..7523486,7577287..7577634,7597078..7597180,7602433..7602490,7604819..7604932)
location: region:7522797-7604932:1
so has part: feature:7522797-7522842:1:exon
so has part: feature:7523151-7523486:1:exon
so has part: feature:7577287-7577634:1:exon
so has part: feature:7597078-7597180:1:exon
so has part: feature:7602433-7602490:1:exon
so has part: feature:7604819-7604932:1:exon

XP_027381838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7522797-7522842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7523151-7523486:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7577287-7577634:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7597078-7597180:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7602433-7602490:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7604819-7604932:1:exon

DOK6
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: DOK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7619872..8032765)
location: region:7619872-8032765:-1
so has part: feature:7619872-8032765:-1:exon
subclass of: SO_0000010

113882653
type: Gene
SIO_000068: ncbigene

position:7619872:-1
position: 7619872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8032765:-1
position: 8032765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7619872-8032765:-1:exon

DOK6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: DOK6
product: docking protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_027525620.1
SIO_010081: DOK6
subclass of: SO_0000673
so part of: DOK6
location: complement(join(7619872..7627554,7703597..7703714,7718719..7718857,7774676..7774865,7790839..7790958,7862349..7862463,7894183..7894290,8032578..8032765))
location: region:7619872-8032765:-1
so has part: feature:8032578-8032765:-1:exon
so has part: feature:7894183-7894290:-1:exon
so has part: feature:7862349-7862463:-1:exon
so has part: feature:7790839-7790958:-1:exon
so has part: feature:7774676-7774865:-1:exon
so has part: feature:7718719-7718857:-1:exon
so has part: feature:7703597-7703714:-1:exon
so has part: feature:7619872-7627554:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8032578-8032765:-1:exon

position:8032578:-1
position: 8032578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7894183-7894290:-1:exon

position:7894183:-1
position: 7894183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7894290:-1
position: 7894290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7862349-7862463:-1:exon

position:7862349:-1
position: 7862349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7862463:-1
position: 7862463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7790839-7790958:-1:exon

position:7790839:-1
position: 7790839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7790958:-1
position: 7790958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7774676-7774865:-1:exon

position:7774676:-1
position: 7774676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7774865:-1
position: 7774865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7718719-7718857:-1:exon

position:7718719:-1
position: 7718719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7718857:-1
position: 7718857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7703597-7703714:-1:exon

position:7703597:-1
position: 7703597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7703714:-1
position: 7703714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7619872-7627554:-1:exon

position:7627554:-1
position: 7627554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DOK6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: DOK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: docking protein 6
translation: MASNFNDIVKQGYVKIRSRKLGIFRRCWLVFKKASSKGPRRLEKFPDEKAAYFRNFHKVTELHNIKNITRLPRETKKHAVAIIFHDETSKTFACESELEAEEWCKHLCMECLGTRLNDISLGEPDLLAAGVQREQNERFNVYLMPTPNLDIYGECTMQITHENIYLWDIHNAKVKLVMWPLSSLRRYGRDSTWFTFESGRMCDTGEGLFTFQTREGEMIYQKVHSATLAIAEQHERLMLEMEQKARLQTSLTEPMTLSKSISLPRSAYWHHITRQSSVGEIYSLQGHGFGPSKMSRAQTFPSYASEQSEETQPALSRSSSYGFSYSSSLIQ
SIO_010081: DOK6
subclass of: SO_0000673
so part of: DOK6
location: complement(join(7627415..7627554,7703597..7703714,7718719..7718857,7774676..7774865,7790839..7790958,7862349..7862463,7894183..7894290,8032578..8032643))
location: region:7627415-8032643:-1
so has part: feature:8032578-8032643:-1:exon
so has part: feature:7894183-7894290:-1:exon
so has part: feature:7862349-7862463:-1:exon
so has part: feature:7790839-7790958:-1:exon
so has part: feature:7774676-7774865:-1:exon
so has part: feature:7718719-7718857:-1:exon
so has part: feature:7703597-7703714:-1:exon
so has part: feature:7627415-7627554:-1:exon

XP_027381421.1
type: Protein
SIO_000068: ncbiprotein

position:7627415:-1
position: 7627415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8032643:-1
position: 8032643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8032578-8032643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7894183-7894290:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7862349-7862463:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7790839-7790958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7774676-7774865:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7718719-7718857:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7703597-7703714:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7627415-7627554:-1:exon

LOC113882654
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7627511..7633163
location: region:7627511-7633163:1
so has part: feature:7627511-7633163:1:exon
subclass of: SO_0000011

113882654
type: Gene
SIO_000068: ncbigene

position:7627511:1
position: 7627511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7633163:1
position: 7633163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7627511-7633163:1:exon

LOC113882654
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 30522
nc RNA class: lncRNA
gene: LOC113882654
product: uncharacterized LOC113882654
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_003508414.1
SIO_010081: LOC113882654
subclass of: SO_0000673
so part of: LOC113882654
location: join(7627511..7627597,7632775..7633163)
location: region:7627511-7633163:1
so has part: feature:7627511-7627597:1:exon
so has part: feature:7632775-7633163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7627511-7627597:1:exon

position:7627597:1
position: 7627597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7632775-7633163:1:exon

position:7632775:1
position: 7632775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC102B
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: CCDC102B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8344869..8622286)
location: region:8344869-8622286:-1
so has part: feature:8344869-8622286:-1:exon
subclass of: SO_0000010

113882783
type: Gene
SIO_000068: ncbigene

position:8344869:-1
position: 8344869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8622286:-1
position: 8622286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8344869-8622286:-1:exon

CCDC102B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: CCDC102B
product: coiled-coil domain containing 102B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_027525911.1
SIO_010081: CCDC102B
subclass of: SO_0000673
so part of: CCDC102B
location: complement(join(8344869..8346318,8385399..8385502,8421664..8421834,8522977..8523186,8545827..8545943,8567810..8567918,8578782..8579002,8580361..8580967,8622049..8622286))
location: region:8344869-8622286:-1
so has part: feature:8622049-8622286:-1:exon
so has part: feature:8580361-8580967:-1:exon
so has part: feature:8578782-8579002:-1:exon
so has part: feature:8567810-8567918:-1:exon
so has part: feature:8545827-8545943:-1:exon
so has part: feature:8522977-8523186:-1:exon
so has part: feature:8421664-8421834:-1:exon
so has part: feature:8385399-8385502:-1:exon
so has part: feature:8344869-8346318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8622049-8622286:-1:exon

position:8622049:-1
position: 8622049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8580361-8580967:-1:exon

position:8580361:-1
position: 8580361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8580967:-1
position: 8580967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8578782-8579002:-1:exon

position:8578782:-1
position: 8578782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8579002:-1
position: 8579002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8567810-8567918:-1:exon

position:8567810:-1
position: 8567810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8567918:-1
position: 8567918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8545827-8545943:-1:exon

position:8545827:-1
position: 8545827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8545943:-1
position: 8545943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8522977-8523186:-1:exon

position:8522977:-1
position: 8522977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8523186:-1
position: 8523186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8421664-8421834:-1:exon

position:8421664:-1
position: 8421664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8421834:-1
position: 8421834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8385399-8385502:-1:exon

position:8385399:-1
position: 8385399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8385502:-1
position: 8385502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8344869-8346318:-1:exon

position:8346318:-1
position: 8346318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC102B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: CCDC102B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 102B
translation: MNLDSIHRLIEETRIFGMQQSCVRSPCDLAAPAPARGDPGSSCPSPLGPQSPAARSGRAPSWSTSEWDIRAELRLRELEEVKARAAQMEKTMRWWSDCTANWREKWSKVRAERNSAREEGRQLRIKLDMAVKELSALKKKQPLPHPAEATQDRKLPGFPEVARAQRDPLQTGSKTCESIRECLGKREFPTKENANSKEASLIIDPLKLSEEMKLSLDCPDLFKNGVSENCTVRPGLRLQAINLPLENEMPEISALQGHLDDFQKVLWKEREMRLSLEKEIERLESALSVWKWKYEELKESKAKSLKQFDILHGQHKNEVEEVSGLIREESKSQNSNDRVVYELRAELERLQAENTSEWDKRELLEKEKQGLERENRRLKVQVKEMEELLHRRNRLSENLEGPDFKTSGVELQEKNKELVDLQHAYCKLSRQYQAKTAELTHANNLVDQNEAEVKKLRLRVEELKWGLNQKEDKLDDFLNQIHKLQRSLNEQKETNENLEIKLRHLQNRDF
SIO_010081: CCDC102B
subclass of: SO_0000673
so part of: CCDC102B
location: complement(join(8346309..8346318,8385399..8385502,8421664..8421834,8522977..8523186,8545827..8545943,8567810..8567918,8578782..8579002,8580361..8580951))
location: region:8346309-8580951:-1
so has part: feature:8580361-8580951:-1:exon
so has part: feature:8578782-8579002:-1:exon
so has part: feature:8567810-8567918:-1:exon
so has part: feature:8545827-8545943:-1:exon
so has part: feature:8522977-8523186:-1:exon
so has part: feature:8421664-8421834:-1:exon
so has part: feature:8385399-8385502:-1:exon
so has part: feature:8346309-8346318:-1:exon

XP_027381712.1
type: Protein
SIO_000068: ncbiprotein

position:8346309:-1
position: 8346309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8580951:-1
position: 8580951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8580361-8580951:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8578782-8579002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8567810-8567918:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8545827-8545943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8522977-8523186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8421664-8421834:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8385399-8385502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8346309-8346318:-1:exon

TMX3
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: TMX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8676548..8714945
location: region:8676548-8714945:1
so has part: feature:8676548-8714945:1:exon
subclass of: SO_0000010

113882610
type: Gene
SIO_000068: ncbigene

position:8676548:1
position: 8676548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8714945:1
position: 8714945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8676548-8714945:1:exon

TMX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TMX3
product: thioredoxin related transmembrane protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 59 ESTs, 5 long SRA reads, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 190 samples with support for all annotated introns
transcript id: XM_027525542.1
SIO_010081: TMX3
subclass of: SO_0000673
so part of: TMX3
location: join(8676548..8676782,8677672..8677726,8681009..8681048,8682273..8682396,8688947..8688992,8690577..8690657,8692694..8692793,8693470..8693547,8696156..8696222,8697639..8697737,8700108..8700165,8700364..8700417,8703766..8703822,8708679..8708808,8709990..8710058,8711544..8714945)
location: region:8676548-8714945:1
so has part: feature:8676548-8676782:1:exon
so has part: feature:8677672-8677726:1:exon
so has part: feature:8681009-8681048:1:exon
so has part: feature:8682273-8682396:1:exon
so has part: feature:8688947-8688992:1:exon
so has part: feature:8690577-8690657:1:exon
so has part: feature:8692694-8692793:1:exon
so has part: feature:8693470-8693547:1:exon
so has part: feature:8696156-8696222:1:exon
so has part: feature:8697639-8697737:1:exon
so has part: feature:8700108-8700165:1:exon
so has part: feature:8700364-8700417:1:exon
so has part: feature:8703766-8703822:1:exon
so has part: feature:8708679-8708808:1:exon
so has part: feature:8709990-8710058:1:exon
so has part: feature:8711544-8714945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8676548-8676782:1:exon

position:8676782:1
position: 8676782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8677672-8677726:1:exon

position:8677672:1
position: 8677672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8677726:1
position: 8677726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8681009-8681048:1:exon

position:8681009:1
position: 8681009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8681048:1
position: 8681048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8682273-8682396:1:exon

position:8682273:1
position: 8682273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8682396:1
position: 8682396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8688947-8688992:1:exon

position:8688947:1
position: 8688947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8688992:1
position: 8688992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8690577-8690657:1:exon

position:8690577:1
position: 8690577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8690657:1
position: 8690657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8692694-8692793:1:exon

position:8692694:1
position: 8692694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8692793:1
position: 8692793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8693470-8693547:1:exon

position:8693470:1
position: 8693470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8693547:1
position: 8693547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8696156-8696222:1:exon

position:8696156:1
position: 8696156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8696222:1
position: 8696222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8697639-8697737:1:exon

position:8697639:1
position: 8697639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8697737:1
position: 8697737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8700108-8700165:1:exon

position:8700108:1
position: 8700108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8700165:1
position: 8700165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8700364-8700417:1:exon

position:8700364:1
position: 8700364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8700417:1
position: 8700417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8703766-8703822:1:exon

position:8703766:1
position: 8703766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8703822:1
position: 8703822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8708679-8708808:1:exon

position:8708679:1
position: 8708679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8708808:1
position: 8708808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8709990-8710058:1:exon

position:8709990:1
position: 8709990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8710058:1
position: 8710058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8711544-8714945:1:exon

position:8711544:1
position: 8711544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: TMX3
product: thioredoxin related transmembrane protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 ESTs, 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 142 samples with support for all annotated introns
transcript id: XM_027525543.1
SIO_010081: TMX3
subclass of: SO_0000673
so part of: TMX3
location: join(8676582..8676782,8677672..8677726,8681009..8681048,8682273..8682396,8690577..8690657,8692694..8692793,8693470..8693547,8696156..8696222,8697639..8697737,8700108..8700165,8700364..8700417,8703766..8703822,8708679..8708808,8709990..8710058,8711544..8714945)
location: region:8676582-8714945:1
so has part: feature:8676582-8676782:1:exon
so has part: feature:8677672-8677726:1:exon
so has part: feature:8681009-8681048:1:exon
so has part: feature:8682273-8682396:1:exon
so has part: feature:8690577-8690657:1:exon
so has part: feature:8692694-8692793:1:exon
so has part: feature:8693470-8693547:1:exon
so has part: feature:8696156-8696222:1:exon
so has part: feature:8697639-8697737:1:exon
so has part: feature:8700108-8700165:1:exon
so has part: feature:8700364-8700417:1:exon
so has part: feature:8703766-8703822:1:exon
so has part: feature:8708679-8708808:1:exon
so has part: feature:8709990-8710058:1:exon
so has part: feature:8711544-8714945:1:exon

position:8676582:1
position: 8676582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8676582-8676782:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8677672-8677726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8681009-8681048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8682273-8682396:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8690577-8690657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8692694-8692793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8693470-8693547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8696156-8696222:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8697639-8697737:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8700108-8700165:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8700364-8700417:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8703766-8703822:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8708679-8708808:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8709990-8710058:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8711544-8714945:1:exon

TMX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TMX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein disulfide-isomerase TMX3 isoform X1
translation: MAARRRGPALRFWAAVFLLDLALCKGHVEDLDDSFKENRKDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSLGSPVKVGKMDATSYSSIASEFGVRGYPTIKLLKGDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQMFEHMQKRHRVFFVYIGGESPLKEKYIDAASELIVYTYFFSASEEVVPAYVTLKEMPAVLVFKDETYFVYDEYEDGDLSSWINKERFQNYLTMDGFLLYELGDTGKLVAIAVIDEKNTSVEHTRLKSIIQEVARDYRDQFHRDFQFGHMDGNDYINTLLMDELKVPTVVVLNTSNQQYFLLDRQIKNAEDMVQFINNILDGTVDAQGGDSILQRLKRIVFDAKSTVVSIFRSSPLMGCFLFGLPLGVISIMCYGICTADADGGYIEERYEVSKNEPDDSPEPAERPEPPQPRGAASPLPTPQEPKDVLEKKKD
SIO_010081: TMX3
subclass of: SO_0000673
so part of: TMX3
location: join(8676737..8676782,8677672..8677726,8681009..8681048,8682273..8682396,8688947..8688992,8690577..8690657,8692694..8692793,8693470..8693547,8696156..8696222,8697639..8697737,8700108..8700165,8700364..8700417,8703766..8703822,8708679..8708808,8709990..8710058,8711544..8711804)
location: region:8676737-8711804:1
so has part: feature:8676737-8676782:1:exon
so has part: feature:8677672-8677726:1:exon
so has part: feature:8681009-8681048:1:exon
so has part: feature:8682273-8682396:1:exon
so has part: feature:8688947-8688992:1:exon
so has part: feature:8690577-8690657:1:exon
so has part: feature:8692694-8692793:1:exon
so has part: feature:8693470-8693547:1:exon
so has part: feature:8696156-8696222:1:exon
so has part: feature:8697639-8697737:1:exon
so has part: feature:8700108-8700165:1:exon
so has part: feature:8700364-8700417:1:exon
so has part: feature:8703766-8703822:1:exon
so has part: feature:8708679-8708808:1:exon
so has part: feature:8709990-8710058:1:exon
so has part: feature:8711544-8711804:1:exon

XP_027381343.1
type: Protein
SIO_000068: ncbiprotein

position:8676737:1
position: 8676737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8711804:1
position: 8711804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8676737-8676782:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8677672-8677726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8681009-8681048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8682273-8682396:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8688947-8688992:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8690577-8690657:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8692694-8692793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8693470-8693547:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8696156-8696222:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8697639-8697737:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8700108-8700165:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8700364-8700417:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8703766-8703822:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8708679-8708808:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8709990-8710058:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8711544-8711804:1:exon

TMX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30522
gene: TMX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein disulfide-isomerase TMX3 isoform X2
translation: MFEHMQKRHRVFFVYIGGESPLKEKYIDAASELIVYTYFFSASEEVVPAYVTLKEMPAVLVFKDETYFVYDEYEDGDLSSWINKERFQNYLTMDGFLLYELGDTGKLVAIAVIDEKNTSVEHTRLKSIIQEVARDYRDQFHRDFQFGHMDGNDYINTLLMDELKVPTVVVLNTSNQQYFLLDRQIKNAEDMVQFINNILDGTVDAQGGDSILQRLKRIVFDAKSTVVSIFRSSPLMGCFLFGLPLGVISIMCYGICTADADGGYIEERYEVSKNEPDDSPEPAERPEPPQPRGAASPLPTPQEPKDVLEKKKD
SIO_010081: TMX3
subclass of: SO_0000673
so part of: TMX3
location: join(8692725..8692793,8693470..8693547,8696156..8696222,8697639..8697737,8700108..8700165,8700364..8700417,8703766..8703822,8708679..8708808,8709990..8710058,8711544..8711804)
location: region:8692725-8711804:1
so has part: feature:8692725-8692793:1:exon
so has part: feature:8693470-8693547:1:exon
so has part: feature:8696156-8696222:1:exon
so has part: feature:8697639-8697737:1:exon
so has part: feature:8700108-8700165:1:exon
so has part: feature:8700364-8700417:1:exon
so has part: feature:8703766-8703822:1:exon
so has part: feature:8708679-8708808:1:exon
so has part: feature:8709990-8710058:1:exon
so has part: feature:8711544-8711804:1:exon

XP_027381344.1
type: Protein
SIO_000068: ncbiprotein

position:8692725:1
position: 8692725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8692725-8692793:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8693470-8693547:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8696156-8696222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8697639-8697737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8700108-8700165:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8700364-8700417:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8703766-8703822:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8708679-8708808:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8709990-8710058:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8711544-8711804:1:exon

LOC113882886
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: LOC113882886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8773115..8773554)
location: region:8773115-8773554:-1
so has part: feature:8773115-8773554:-1:exon

113882886
type: Gene
SIO_000068: ncbigene

position:8773115:-1
position: 8773115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8773554:-1
position: 8773554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8773115-8773554:-1:exon

LOC113882886
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: LOC113882886
product: HIG1 domain family member 1A, mitochondrial pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_003508466.1
SIO_010081: LOC113882886
so part of: LOC113882886
location: complement(8773115..8773554)
location: region:8773115-8773554:-1
so has part: feature:8773115-8773554:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8773115-8773554:-1:exon

DSEL
type: Gene
subclass of: SO_0000704
RO_0002162: 30522
gene: DSEL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9661285..9680404
location: region:9661285-9680404:1
so has part: feature:9661285-9680404:1:exon
subclass of: SO_0000010

113882665
type: Gene
SIO_000068: ncbigene

position:9661285:1
position: 9661285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9680404:1
position: 9680404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9661285-9680404:1:exon

DSEL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 30522
gene: DSEL
product: dermatan sulfate epimerase like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs, 1 long SRA read, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 163 samples with support for all annotated introns
transcript id: XM_027525636.1
SIO_010081: DSEL
subclass of: SO_0000673
so part of: DSEL
location: join(9661285..9661425,9662282..9671040)
location: region:9661285-9671040:1
so has part: feature:9661285-9661425:1:exon
so has part: feature:9662282-9671040:1:exon

position:9671040:1
position: 9671040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9661285-9661425:1:exon

position:9661425:1
position: 9661425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9662282-9671040:1:exon

position:9662282:1
position: 9662282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DSEL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 30522
gene: DSEL
product: dermatan sulfate epimerase like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_003508416.1
SIO_010081: DSEL
so part of: DSEL
location: join(9661336..9661425,9662282..9666820,9667423..9667512,9677112..9680404)
location: region:9661336-9680404:1
so has part: feature:9661336-9661425:1:exon
so has part: feature:9662282-9666820:1:exon
so has part: feature:9667423-9667512:1:exon
so has part: feature:9677112-9680404:1:exon

position:9661336:1
position: 9661336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9661336-9661425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9662282-9666820:1:exon

position:9666820:1
position: 9666820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9667423-9667512:1:exon

position:9667423:1
position: 9667423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9667512:1
position: 9667512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9677112-9680404:1:exon