Bufo gargarizans mitochondrion, complete genome.
type: Entry
definition: Bufo gargarizans mitochondrion, complete genome.
sequence version: NC_008410.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_008410.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Bufo gargarizans (Chusan Island toad)
organism: Bufo gargarizans
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo.
reference: 1
references: 16920409
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence was derived from DQ275350.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 17277
topology: circular
so has quality: SO_0000988
location: 1..17277
location: region:1-17277:1
RO_0002162: 30331

NC_008410
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Complete nucleotide sequences and gene organization of mitochondrial genome of Bufo gargarizans
author: Cao, S.Y.
author: Wu, X.B.
author: Yan, P.
author: Hu, Y.L.
author: Su, X.
author: Jiang, Z.G.
journal: Mitochondrion
volume: 6
issue: 4
pages: 186-193
year: 2006
pubmed: 16920409

16920409
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (03-OCT-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Cao, S.-Y.
author: Wu, X.-B.
author: Yan, P.
author: Hu, Y.-L.
author: Su, X.
journal: Submitted (02-NOV-2005) College of Life Science, Anhui Normal University, 1, Beijing Road, Wuhu, Anhui 241000, P. R. China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17277:1
position: 17277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-17277:1:source
so part of: sequence
organism: Bufo gargarizans
organelle: mitochondrion
mol type: genomic DNA
common: Chusan Island toad

30331
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: 1..72
location: region:1-72:1
so has part: feature:1-72:1:region

position:72:1
position: 72
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-72:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Thr
so part of: sequence
location: 73..144
location: region:73-144:1
so has part: feature:73-144:1:region

position:73:1
position: 73
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144:1
position: 144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73-144:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Pro
so part of: sequence
location: 144..212
location: region:144-212:1
so has part: feature:144-212:1:region

position:212:1
position: 212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144-212:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Phe
so part of: sequence
location: 212..279
location: region:212-279:1
so has part: feature:212-279:1:region

position:279:1
position: 279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212-279:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30331
product: s-rRNA
note: 12S ribosomal RNA
so part of: sequence
location: 280..1214
location: region:280-1214:1
so has part: feature:280-1214:1:region

position:280:1
position: 280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214:1
position: 1214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280-1214:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Val
so part of: sequence
location: 1210..1278
location: region:1210-1278:1
so has part: feature:1210-1278:1:region

position:1210:1
position: 1210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1278:1
position: 1278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1210-1278:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 30331
product: l-rRNA
note: 16S ribosomal RNA
so part of: sequence
location: 1279..2874
location: region:1279-2874:1
so has part: feature:1279-2874:1:region

position:1279:1
position: 1279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2874:1
position: 2874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279-2874:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Leu
codon recognized: UUR
so part of: sequence
location: 2876..2948
location: region:2876-2948:1
so has part: feature:2876-2948:1:region

position:2876:1
position: 2876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2948:1
position: 2948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2876-2948:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 30331
gene: ND1
so part of: sequence
location: <2949..3909
location: region:2949-3909:1
so has part: feature:2949-3909:1:exon
subclass of: SO_0000010

4356060
type: Gene
SIO_000068: ncbigene

position:2949:1
position: 2949
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3909:1
position: 3909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2949-3909:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30331
gene: ND1
note: start codon not determined; TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:3909,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 1
translation: LNLPLIISSLCYIAPILLAVAFLTLVERKVLGYMQHRKGPNIVGPTGLLQPIADGIKLFIKEPIRPSTSSQTLFLLAPMMALSLAMIIWTPIPMPVSLSDMNLGVMFLLALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILLSGNFSLQNFSITQEPLWLLIPAWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTISAVIFLGSSTLFILTLTTSSLMLKSAILSMVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALTIWFISFPISLLLTPPIS
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: <2949..3909
location: region:2949-3909:1
so has part: feature:2949-3909:1:exon

YP_778617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2949-3909:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Ile
so part of: sequence
location: 3910..3980
location: region:3910-3980:1
so has part: feature:3910-3980:1:region

position:3910:1
position: 3910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3980:1
position: 3980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3910-3980:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Gln
so part of: sequence
location: 3980..4050
location: region:3980-4050:1
so has part: feature:3980-4050:1:region

position:4050:1
position: 4050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3980-4050:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Met
so part of: sequence
location: 4050..4118
location: region:4050-4118:1
so has part: feature:4050-4118:1:region

position:4118:1
position: 4118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4050-4118:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 30331
gene: ND2
so part of: sequence
location: 4119..5153
location: region:4119-5153:1
so has part: feature:4119-5153:1:exon
subclass of: SO_0000010

4356059
type: Gene
SIO_000068: ncbigene

position:4119:1
position: 4119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5153:1
position: 5153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4119-5153:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30331
gene: ND2
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPYALSMIVSSLALGTILTLSSYHWILAWVGLEINTLAIIPLMTKTPHPRAIEAATKYFLTQAAASALILFSSILNAFTMGEWAINVPSHPIPATLLSIALAMKLGVAPFHFWLPEVLQGSTLQTGFILSTWQKLAPMALLIQLSQSVNLTLMLTLGLLSTIVGGWGGINQTQIRKVLAFSSVAHLGWMVAILKISPSLTLLNFSLYILMTSTLFMTFISLNTKNMYELSTTWSKTPTLAALSMLSLLSLSGLPPLTGFLPKWLIAQEMIKQDMIAFALMILLSTLLSLFFYLRLTYSMSLTLAPNLSSSSLLWFNPSKNILASPMILSLLLLPLTPTIMVII
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 4119..5153
location: region:4119-5153:1
so has part: feature:4119-5153:1:exon

YP_778618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4119-5153:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Trp
so part of: sequence
location: 5152..5221
location: region:5152-5221:1
so has part: feature:5152-5221:1:region

position:5152:1
position: 5152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5221:1
position: 5221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5152-5221:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Ala
so part of: sequence
location: 5222..5290
location: region:5222-5290:1
so has part: feature:5222-5290:1:region

position:5222:1
position: 5222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5290:1
position: 5290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5222-5290:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Asn
so part of: sequence
location: 5291..5363
location: region:5291-5363:1
so has part: feature:5291-5363:1:region

position:5291:1
position: 5291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5363:1
position: 5363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5291-5363:1:region

rep_origin
type: Replication Origin
subclass of: SO_0000296
RO_0002162: 30331
note: L-strand origin of replication
so part of: sequence
location: 5364..5392
location: region:5364-5392:1
so has part: feature:5364-5392:1:region

position:5364:1
position: 5364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5392:1
position: 5392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5364-5392:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Cys
so part of: sequence
location: 5389..5454
location: region:5389-5454:1
so has part: feature:5389-5454:1:region

position:5389:1
position: 5389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5454:1
position: 5454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5389-5454:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Tyr
so part of: sequence
location: 5454..5523
location: region:5454-5523:1
so has part: feature:5454-5523:1:region

position:5523:1
position: 5523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5454-5523:1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 30331
gene: COX1
so part of: sequence
location: 5528..7069
location: region:5528-7069:1
so has part: feature:5528-7069:1:exon
subclass of: SO_0000010

4356058
type: Gene
SIO_000068: ncbigene

position:5528:1
position: 5528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7069:1
position: 7069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5528-7069:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30331
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MITRWLFSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASAGVEAGAGTGWTVYPPLAGNLAHAGPSVDLTIFSLHLAGVSSILGAINFITTTLNMKPPSMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTFYSSKKEPFGYMGMVWAMMSIGLLGFIVWAHHMFTTDLNVDTRAYFTSATMIIAIPTGVKVFSWLATMHGGVIKWDAPMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLHETWAKIHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTVSSIGSLISLVAVIIMMFIIWEAFSSKRLLISASMTSTNVEWLYGFPPLHHTFEEASFSQTN
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5528..7069
location: region:5528-7069:1
so has part: feature:5528-7069:1:exon

YP_778619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5528-7069:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Ser
codon recognized: UCN
so part of: sequence
location: 7072..7142
location: region:7072-7142:1
so has part: feature:7072-7142:1:region

position:7072:1
position: 7072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7142:1
position: 7142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7072-7142:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Asp
so part of: sequence
location: 7144..7212
location: region:7144-7212:1
so has part: feature:7144-7212:1:region

position:7144:1
position: 7144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7212:1
position: 7212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7144-7212:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 30331
gene: COX2
so part of: sequence
location: 7214..7901
location: region:7214-7901:1
so has part: feature:7214-7901:1:exon
subclass of: SO_0000010

4356057
type: Gene
SIO_000068: ncbigene

position:7214:1
position: 7214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7901:1
position: 7901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7214-7901:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30331
gene: COX2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:7901,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPLQLGFQDAASPIMEELLHFHDHTLMAVFLISTLVLYIISTLMSTKLSNTNTIDAQEIEMVWTIMPAIILIVIALPSLRILYLMDEVSNPDVTIKAIGHQWYWSYEYSDFNDLSFDSYMIPSKDLLPGQFRLLEVDNRMTTPVGMTTRTLITAEDVLHSWAVPSLGVKLDAIPGRLNQTSFIISRPGVYYGQCSEICGANHSFMPIVVESLPIKEFLNWSSASVNA
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7214..7901
location: region:7214-7901:1
so has part: feature:7214-7901:1:exon

YP_778620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7214-7901:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Lys
so part of: sequence
location: 7902..7973
location: region:7902-7973:1
so has part: feature:7902-7973:1:region

position:7902:1
position: 7902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7973:1
position: 7973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7902-7973:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 30331
gene: ATP8
so part of: sequence
location: 7975..8139
location: region:7975-8139:1
so has part: feature:7975-8139:1:exon
subclass of: SO_0000010

4356061
type: Gene
SIO_000068: ncbigene

position:7975:1
position: 7975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8139:1
position: 8139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7975-8139:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30331
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLDPAPWFFILFSAWMVFILISPLKTSNYIHLNDPSPKPFKGLNKPWHWPWP
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7975..8139
location: region:7975-8139:1
so has part: feature:7975-8139:1:exon

YP_778621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7975-8139:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 30331
gene: ATP6
so part of: sequence
location: 8130..8813
location: region:8130-8813:1
so has part: feature:8130-8813:1:exon
subclass of: SO_0000010

4356062
type: Gene
SIO_000068: ncbigene

position:8130:1
position: 8130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8813:1
position: 8813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8130-8813:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30331
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MTMNLFSQFASPTLLGIPLILVAFVVPWLLFPTPCNRWTTNRLVTIQSWFVKTFTKQIFLPLNTPGHKWALILASLMIFLLGMNLLGLLPYTFTPTTQLSLNLGLAIPLWLATVAIGFRNQLTASLGHFLPEGTPTPLIPILIIIETISLFIRPLALGVRLTANLTAGHLLIQLISTATMALLFSNPVVSSLTFATLLLLTMLEIAVAMIQAYVFVLLLSLYLQENT
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 8130..8813
location: region:8130-8813:1
so has part: feature:8130-8813:1:exon

YP_778622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8130-8813:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 30331
gene: COX3
so part of: sequence
location: 8813..9596
location: region:8813-9596:1
so has part: feature:8813-9596:1:exon
subclass of: SO_0000010

4356063
type: Gene
SIO_000068: ncbigene

position:9596:1
position: 9596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8813-9596:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30331
gene: COX3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9596,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHAFHMVDPSPWPLTGATAAFMLTTGLAMWFHYGSTWILLLGLTLMLLTMFQWWRDVVREGTFQGHHTTPVQKGLRYGMILFITSEVFFFIGFFWAFYNASLAPTFEVGECWPPAGISPLNPFEVPLLNTAVLLASGVTVTWAHHSIMQGNRKEAIQSLALTIVLGLYFTALQAMEYYEAPFTIADGIYGSTFFVATGFHGLHVIIGSLFLLTCLLRQINFHFTAQHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8813..9596
location: region:8813-9596:1
so has part: feature:8813-9596:1:exon

YP_778623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8813-9596:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Gly
so part of: sequence
location: 9597..9665
location: region:9597-9665:1
so has part: feature:9597-9665:1:region

position:9597:1
position: 9597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9665:1
position: 9665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9597-9665:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 30331
gene: ND3
so part of: sequence
location: 9666..10007
location: region:9666-10007:1
so has part: feature:9666-10007:1:exon
subclass of: SO_0000010

4356064
type: Gene
SIO_000068: ncbigene

position:9666:1
position: 9666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10007:1
position: 10007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9666-10007:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30331
gene: ND3
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MTLFVILTLVIVSILASISFWLPTINSDSEKLSPYECGFDPLGSARLPYSMRFFLVAILFLLFDLEIALLLPTPWAAQLPYPTLSILLASVILILLTLGFVYEWLQGGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 9666..10007
location: region:9666-10007:1
so has part: feature:9666-10007:1:exon

YP_778624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9666-10007:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Arg
so part of: sequence
location: 10006..10074
location: region:10006-10074:1
so has part: feature:10006-10074:1:region

position:10006:1
position: 10006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10074:1
position: 10074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10006-10074:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 30331
gene: ND4L
so part of: sequence
location: 10075..10374
location: region:10075-10374:1
so has part: feature:10075-10374:1:exon
subclass of: SO_0000010

4356052
type: Gene
SIO_000068: ncbigene

position:10075:1
position: 10075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10374:1
position: 10374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10075-10374:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30331
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MMTNESWLLSSTFMLSLIGLSFHRAHLLSALLCLEGMMLSIFIGLGLWALKFALIAPLMYPIAMLTMSACEAGLGLSLMIATARTHGSDNLNTLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 10075..10374
location: region:10075-10374:1
so has part: feature:10075-10374:1:exon

YP_778625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10075-10374:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 30331
gene: ND4
so part of: sequence
location: 10368..11732
location: region:10368-11732:1
so has part: feature:10368-11732:1:exon
subclass of: SO_0000010

4356053
type: Gene
SIO_000068: ncbigene

position:10368:1
position: 10368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11732:1
position: 11732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10368-11732:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30331
gene: ND4
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLMVVIPLATLLLSAWLAPAKRLWEIITTQSLIIAVMSTTWLMTQETSPFLNNYFTIDEISSPLLVLTCWLTAPTLLASQSKLSKEPISRQRAYIFTIIMLQVTTLLAFLADNMILFFIMFEATMIPTLIVITRWGAQKERMLAGTYLIFYTLFGSMALLTALLYFHETFGTMSISLAKSFSANYTLSTCSLTWWLACLIAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAGTLLKLGGYGILRMNAFITDSFTPLAQPLIVFSLFGVLLSAILCSRQTDLKSLIAFSSVSHMGLVIAASMIKTEWSIAGSMVLMISHGLVSSALFCLANTSYERTNSRTLILLQGTQIIFPLAAAWWLLATLMNLALPPSPNFIGEMSILTSLFQWSNMTLTLTGLGIIFTTAYSLYMFWSSQREHLPSHLNYLPPTHTREHILLALHILPALLLMLKPTLMF
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10368..11732
location: region:10368-11732:1
so has part: feature:10368-11732:1:exon

YP_778626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10368-11732:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-His
so part of: sequence
location: 11733..11801
location: region:11733-11801:1
so has part: feature:11733-11801:1:region

position:11733:1
position: 11733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11801:1
position: 11801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11733-11801:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Ser
codon recognized: AGY
so part of: sequence
location: 11802..11868
location: region:11802-11868:1
so has part: feature:11802-11868:1:region

position:11802:1
position: 11802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11868:1
position: 11868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11802-11868:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 30331
gene: ND5
so part of: sequence
location: 11906..13694
location: region:11906-13694:1
so has part: feature:11906-13694:1:exon
subclass of: SO_0000010

4356054
type: Gene
SIO_000068: ncbigene

position:11906:1
position: 11906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13694:1
position: 13694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11906-13694:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30331
gene: ND5
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:13694,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MSFPTIALTSYLISMLSLIVPLLNPNSTDFHSKTKTAIKTAFLVSLIPAILMINENSQPAAISWKWFNILMTPFNLTIQLDQYSILFIPIALMVSWSIIEYSLWYMHNDIKTQLFFKYLLIFLLAMMLLVSAGNLLMLFIGWEGVGIMSYLLIGWYFTRSNAGAAALQAVLYNRIGDIGFLFAMFWLISSYDSIDLNFIFSMESPTPLLLAFIIAAASKSAQFGLHPWLASAMEGPTPVSALLHSSTMVVAGVFLLIRIHPLIKDNQTALTTCLCLGAISTVFAATCALTQNDIKKIIAYSTSSQLGLMVVAIGLNMPHLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKTLPFTTMCMTIGSLALMGTPYLAGFFSKDAIIEAINTSNVNAWALTLTIIATSFTAVYSLRVIFFASLDHPRFPPTSSINENNPTMINPIKRLAIGSIIAGFLLNQVIIPSSPMTMTMPTYLKITAIAVTILGFLIALDLANISWTKSPKQTNTSKTINTSFYPTTIHRLLPSYAMDMSLRISSHLIDTLWLEKIGPKGLAELQLPPIMKNQEIQRGQIKTYLTIFIFTAILCLIV
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11906..13694
location: region:11906-13694:1
so has part: feature:11906-13694:1:exon

YP_778627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11906-13694:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 30331
gene: ND6
so part of: sequence
location: complement(13692..14186)
location: region:13692-14186:-1
so has part: feature:13692-14186:-1:exon
subclass of: SO_0000010

4356055
type: Gene
SIO_000068: ncbigene

position:13692:-1
position: 13692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14186:-1
position: 14186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13692-14186:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30331
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MTVLFELGLIVGLLAVASNPSPYYAALGLVGSAGAGCLILMDGGASFLCLVLFLVYLGGMMVVFAYSAALVAEPYPEAWGGGVVWSYIVVYTVLLGVWWVVGGVNNQVEVVDAVGVYAGDWYGVAMMFFWGGGVLMAVGWALLLTLFAVLEVVRGHYGGVLRAV
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(13692..14186)
location: region:13692-14186:-1
so has part: feature:13692-14186:-1:exon

YP_778628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13692-14186:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 30331
product: tRNA-Glu
so part of: sequence
location: 14187..14254
location: region:14187-14254:1
so has part: feature:14187-14254:1:region

position:14187:1
position: 14187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14254:1
position: 14254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14187-14254:1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 30331
gene: CYTB
so part of: sequence
location: 14259..15404
location: region:14259-15404:1
so has part: feature:14259-15404:1:exon
subclass of: SO_0000010

4356056
type: Gene
SIO_000068: ncbigene

position:14259:1
position: 14259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15404:1
position: 15404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14259-15404:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 30331
gene: CYTB
codon start: 1
transl table: 2
product: cytochrome b
translation: MAPVLRKTHPLVKIINNSFIDLPAPVNLSSLWNFGSLLGVCLIAQIVTGLFLAMHYTADTSMAFSSVAHICRDVNNGWLLRNLHANGASFFFICIYLHIGRGMYYGSFLFKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAAPYIGTELVQWIWGGFSVDNATLTRFFTFHFILPFIIAGASMLHLLFLHQTGSSNPTGLNPNFDKIPFHAYYSYKDLFGFATMLALLALLSTFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSIMILFLMPFLHTSKQRTLMFRPLAKLFFWTLVANTLILTWIGGQPVEDPFVMIGQLASISYFSIFIIFIPLLGLTENKLTQLS
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 14259..15404
location: region:14259-15404:1
so has part: feature:14259-15404:1:exon

YP_778629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14259-15404:1:exon

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 30331
so part of: sequence
location: 15406..17277
location: region:15406-17277:1
so has part: feature:15406-17277:1:region

position:15406:1
position: 15406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15406-17277:1:region