Thermus thermophilus HB8 plasmid pTT8, complete sequence.
Bacteria; Deinococcota; Deinococci; Thermales; Thermaceae; Thermus.
Complete genome sequence of Thermus thermophilus HB8
Submitted (11-NOV-2004) Contact:Ken Kurokawa Nara Institute of Science and Technology, Graduate School of Information Science; 8916-5, Takayamacho, Ikoma, Nara 630-0192, Japan URL :http://www.naist.jp/
REFSEQ INFORMATION: The reference sequence is identical to\nAP008228.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/24/2022 01:54:09\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,280\nCDSs (total) :: 2,223\nGenes (coding) :: 2,176\nCDSs (with protein) :: 2,176\nGenes (RNA) :: 57\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 48\nncRNAs :: 3\nPseudo Genes (total) :: 47\nCDSs (without protein) :: 47\nPseudo Genes (ambiguous residues) :: 0 of 47\nPseudo Genes (frameshifted) :: 20 of 47\nPseudo Genes (incomplete) :: 25 of 47\nPseudo Genes (internal stop) :: 5 of 47\nPseudo Genes (multiple problems) :: 3 of 47\nCRISPR Arrays :: 9\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: protein motif:HMM:NF015076.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
primase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003049714.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_011228385.1
COORDINATES: similar to AA sequence:RefSeq:WP_011228386.1
COORDINATES: similar to AA sequence:RefSeq:WP_019551628.1
COORDINATES: protein motif:HMM:NF039814.1
COORDINATES: similar to AA sequence:RefSeq:WP_015718308.1
COORDINATES: similar to AA sequence:RefSeq:WP_018145948.1
COORDINATES: similar to AA sequence:RefSeq:WP_013012676.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_003049650.1
helix-turn-helix domain-containing protein