Thermus thermophilus HB8 plasmid pTT8, complete sequence.
type: Entry
definition: Thermus thermophilus HB8 plasmid pTT8, complete sequence.
sequence version: NC_006463.1
sequence date: 2022-12-24
sequence: sequence
division: CON
label: NC_006463.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00061070
keyword: RefSeq
source: Thermus thermophilus HB8
organism: Thermus thermophilus HB8
taxonomy: Bacteria; Deinococcota; Deinococci; Thermales; Thermaceae; Thermus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP008228.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/24/2022 01:54:09\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,280\nCDSs (total) :: 2,223\nGenes (coding) :: 2,176\nCDSs (with protein) :: 2,176\nGenes (RNA) :: 57\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 48\nncRNAs :: 3\nPseudo Genes (total) :: 47\nCDSs (without protein) :: 47\nPseudo Genes (ambiguous residues) :: 0 of 47\nPseudo Genes (frameshifted) :: 20 of 47\nPseudo Genes (incomplete) :: 25 of 47\nPseudo Genes (internal stop) :: 5 of 47\nPseudo Genes (multiple problems) :: 3 of 47\nCRISPR Arrays :: 9\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 9322
topology: circular
so has quality: SO_0000988
location: 1..9322
location: region:1-9322:1
RO_0002162: 300852

NC_006463
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00061070
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Thermus thermophilus HB8
author: Masui, R.
author: Kurokawa, K.
author: Nakagawa, N.
author: Tokunaga, F.
author: Koyama, Y.
author: Shibata, T.
author: Oshima, T.
author: Yokoyama, S.
author: Yasunaga, T.
author: Kuramitsu, S.
journal: Unpublished

2
title: Direct Submission
author: Masui, R.
author: Kurokawa, K.
author: Nakagawa, N.
author: Tokunaga, F.
author: Koyama, Y.
author: Shibata, T.
author: Oshima, T.
author: Yokoyama, S.
author: Yasunaga, T.
author: Kuramitsu, S.
journal: Submitted (11-NOV-2004) Contact:Ken Kurokawa Nara Institute of Science and Technology, Graduate School of Information Science; 8916-5, Takayamacho, Ikoma, Nara 630-0192, Japan URL :http://www.naist.jp/

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9322:1
position: 9322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-9322:1:source
so part of: sequence
organism: Thermus thermophilus HB8
mol type: genomic DNA
strain: HB8
type material: type strain of Thermus thermophilus
plasmid: pTT8

300852
type: Taxonomy
SIO_000068: taxonomy

TTH_RS11270
type: Gene
subclass of: SO_0000704
RO_0002162: 300852
locus tag: TTH_RS11270
old locus tag: TTHC001
so part of: sequence
location: 29..1282
location: region:29-1282:1
so has part: feature:29-1282:1:exon
subclass of: SO_0000010

3167921
type: Gene
SIO_000068: ncbigene

position:29:1
position: 29
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282:1
position: 1282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29-1282:1:exon

TTH_RS11270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 300852
locus tag: TTH_RS11270
old locus tag: TTHC001
inference: COORDINATES: protein motif:HMM:NF015076.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primase C-terminal domain-containing protein
translation: MEHHTRPEAQIPDTLAKIAGLFQINPDLGEVVLRAYAALRGLSPEALRAHLLAPPLRPERAREAFQRPYLAHFAQTLPRYPYATDDPKEGVRIYKRENALKRVHVQVGHYPHAVLRLVVDVDLPWPQVEERIHALPPSLVLVNPRSGHFHAWYELDPIPLTPPPGREGSLKGALALLAEVEALLEAYYGADPGYNGLLSRNPFLHPPEWTWGGGKRWSLRDLHRELRGLLPSGTRRRVDPGLASYGRNNALFDRLRAEAYAHVALFRGVPGGEEAFRAWVEQRAHALNQSLFRDHPKGPLDPREVHHTAKSVAKWTYRNYRGARVYPVSSTGRPDRSRLSPQARALIPPLQGQELQEAVREGGRRRGSRRRQEAEEKLTEALKRLQARGERVTARALAREAGVKPHTASKWLKRMRE
SIO_010081: TTH_RS11270
subclass of: SO_0000673
so part of: TTH_RS11270
location: 29..1282
location: region:29-1282:1
so has part: feature:29-1282:1:exon

WP_011171673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29-1282:1:exon

TTH_RS11275
type: Gene
subclass of: SO_0000704
RO_0002162: 300852
locus tag: TTH_RS11275
old locus tag: TTHC002
so part of: sequence
location: complement(1876..2148)
location: region:1876-2148:-1
so has part: feature:1876-2148:-1:exon
subclass of: SO_0000010

3167912
type: Gene
SIO_000068: ncbigene

position:1876:-1
position: 1876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2148:-1
position: 2148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1876-2148:-1:exon

TTH_RS11275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 300852
locus tag: TTH_RS11275
old locus tag: TTHC002
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003049714.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVNPAERLAELDGVLMQYLLEADLLRELPPTYRLVLLPLDEPEVAAQALAWAMEAPNPEGWPSVYALFLQGRPIRLLLLGKEVEVAPRAA
SIO_010081: TTH_RS11275
subclass of: SO_0000673
so part of: TTH_RS11275
location: complement(1876..2148)
location: region:1876-2148:-1
so has part: feature:1876-2148:-1:exon

WP_011229276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1876-2148:-1:exon

TTH_RS11760
type: Gene
subclass of: SO_0000704
RO_0002162: 300852
locus tag: TTH_RS11760
so part of: sequence
location: complement(2142..2264)
location: region:2142-2264:-1
so has part: feature:2142-2264:-1:exon
subclass of: SO_0000010

77145504
type: Gene
SIO_000068: ncbigene

position:2142:-1
position: 2142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2264:-1
position: 2264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2142-2264:-1:exon

TTH_RS11760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 300852
locus tag: TTH_RS11760
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLPEDPGEAARVAERELSLKAEEYIEAYRAAKAQGREGW
SIO_010081: TTH_RS11760
subclass of: SO_0000673
so part of: TTH_RS11760
location: complement(2142..2264)
location: region:2142-2264:-1
so has part: feature:2142-2264:-1:exon

WP_263405781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2142-2264:-1:exon

TTH_RS11280
type: Gene
subclass of: SO_0000704
RO_0002162: 300852
locus tag: TTH_RS11280
old locus tag: TTHC004
so part of: sequence
location: 2754..3464
location: region:2754-3464:1
so has part: feature:2754-3464:1:exon
subclass of: SO_0000010

3167920
type: Gene
SIO_000068: ncbigene

position:2754:1
position: 2754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3464:1
position: 3464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2754-3464:1:exon

TTH_RS11280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 300852
locus tag: TTH_RS11280
old locus tag: TTHC004
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRILEVYRQRGLEGIPWDITLRLPKDDLSFSGYSVTVPGSARIPSGLPQWAQLALWPVKLTTQNGKNIYNAWISQALNGKQAGLDQAVLPKDYAPGANRWLADNGLPVRVTGAYLRDFDASFLLNPYIPITGPIAWVSYTQYTWTTNGLLKDTIGNRDLPAVVLYDSAQIRSGSSYYLHYAPAYRYRVVEYWDWSANFATVDNGKEGLSPRPFGPIEIYLSDYYDLSNGVWRISR
SIO_010081: TTH_RS11280
subclass of: SO_0000673
so part of: TTH_RS11280
location: 2754..3464
location: region:2754-3464:1
so has part: feature:2754-3464:1:exon

WP_164926131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2754-3464:1:exon

TTH_RS11285
type: Gene
subclass of: SO_0000704
RO_0002162: 300852
locus tag: TTH_RS11285
old locus tag: TTHC005
so part of: sequence
location: 3478..3954
location: region:3478-3954:1
so has part: feature:3478-3954:1:exon
subclass of: SO_0000010

3167915
type: Gene
SIO_000068: ncbigene

position:3478:1
position: 3478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3954:1
position: 3954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3478-3954:1:exon

TTH_RS11285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 300852
locus tag: TTH_RS11285
old locus tag: TTHC005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKLVGLGLLASLAVLFSACGEWVFVLTPIDLHVLYYPQNPSLCPGGAGAVSTNNPGFYSLPLKPTTSPPTPPGPGEIIPFPTPSYGPVTLLPFYTSDRPEKYDLTFYCNAGEGRHLTTPGPRWPPRDYFVDNQKTPVLVVVEDGGQPGYLRWYWAYR
SIO_010081: TTH_RS11285
subclass of: SO_0000673
so part of: TTH_RS11285
location: 3478..3954
location: region:3478-3954:1
so has part: feature:3478-3954:1:exon

WP_011229278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3478-3954:1:exon

TTH_RS11290
type: Gene
subclass of: SO_0000704
RO_0002162: 300852
locus tag: TTH_RS11290
so part of: sequence
location: 4026..4199
location: region:4026-4199:1
so has part: feature:4026-4199:1:exon
subclass of: SO_0000010

44146546
type: Gene
SIO_000068: ncbigene

position:4026:1
position: 4026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4199:1
position: 4199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4026-4199:1:exon

TTH_RS11290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 300852
locus tag: TTH_RS11290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF2442 domain-containing protein
translation: MEARPLEGLKLWLRFSDGKEGVVDLSALELPVRALDGAPPKWAVDYPRPALDAQGHV
SIO_010081: TTH_RS11290
subclass of: SO_0000673
so part of: TTH_RS11290
location: 4026..4199
location: region:4026-4199:1
so has part: feature:4026-4199:1:exon

WP_224065261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4026-4199:1:exon

TTH_RS11295
type: Gene
subclass of: SO_0000704
RO_0002162: 300852
locus tag: TTH_RS11295
old locus tag: TTHC007
so part of: sequence
location: 6164..6943
location: region:6164-6943:1
so has part: feature:6164-6943:1:exon
subclass of: SO_0000010

3167910
type: Gene
SIO_000068: ncbigene

position:6164:1
position: 6164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6943:1
position: 6943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6164-6943:1:exon

TTH_RS11295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 300852
locus tag: TTH_RS11295
old locus tag: TTHC007
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011228385.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRDPADYPLLRGQTALLAQALRLVSRDGYRYWQVQTAPTDRILAAVRTLDELHAVLLDRAARAVRRRARLPVAQLLLAPVSVMPPENPPPTWPMLIVATAPLPGERMRRVDPSANPRAPLYWVAWRDGWTPAYVLRTDQRGRWTWFLEDGFYRALLEAALAYAAEGDWRRLVLHMRTLAHLPMFSGVWSQIQEIRKRVQQYWGDRHLRDPSGQWKAPPWRAGLEGWPRTPLSPVGMRLYPEEPPRTLGEWWEMHRRGA
SIO_010081: TTH_RS11295
subclass of: SO_0000673
so part of: TTH_RS11295
location: 6164..6943
location: region:6164-6943:1
so has part: feature:6164-6943:1:exon

WP_011229280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6164-6943:1:exon

TTH_RS11300
type: Gene
subclass of: SO_0000704
RO_0002162: 300852
locus tag: TTH_RS11300
old locus tag: TTHC008
so part of: sequence
location: 6940..7323
location: region:6940-7323:1
so has part: feature:6940-7323:1:exon
subclass of: SO_0000010

3167918
type: Gene
SIO_000068: ncbigene

position:6940:1
position: 6940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7323:1
position: 7323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6940-7323:1:exon

TTH_RS11300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 300852
locus tag: TTH_RS11300
old locus tag: TTHC008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011228386.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNERDLIRHLAHVAHRYAEIVVEGAERHPHLGPLLEALSAATGEEDPRSLPPEAWEEALWGLLVEAIADRLVDGWDRYGAPSAARDPEGEGYVASAEGPGEPIVVRASTKREAYREARKAWVRRLLE
SIO_010081: TTH_RS11300
subclass of: SO_0000673
so part of: TTH_RS11300
location: 6940..7323
location: region:6940-7323:1
so has part: feature:6940-7323:1:exon

WP_011229281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6940-7323:1:exon

TTH_RS11305
type: Gene
subclass of: SO_0000704
RO_0002162: 300852
locus tag: TTH_RS11305
old locus tag: TTHC009
so part of: sequence
location: 7333..7662
location: region:7333-7662:1
so has part: feature:7333-7662:1:exon
subclass of: SO_0000010

3167916
type: Gene
SIO_000068: ncbigene

position:7333:1
position: 7333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7662:1
position: 7662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7333-7662:1:exon

TTH_RS11305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 300852
locus tag: TTH_RS11305
old locus tag: TTHC009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019551628.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPWEHYLLPLLDYRIRVEWNVERGRLLSWAVQLEWLDPEEGRFVWVARYDTAGGLPHRDRNRIARHEPMPHLSPTSGGDLNRARDDLLARAWEYIEAYKAAKAEGREAW
SIO_010081: TTH_RS11305
subclass of: SO_0000673
so part of: TTH_RS11305
location: 7333..7662
location: region:7333-7662:1
so has part: feature:7333-7662:1:exon

WP_011229282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7333-7662:1:exon

TTH_RS11310
type: Gene
subclass of: SO_0000704
RO_0002162: 300852
locus tag: TTH_RS11310
old locus tag: TTHC010
so part of: sequence
location: 7656..7928
location: region:7656-7928:1
so has part: feature:7656-7928:1:exon
subclass of: SO_0000010

3167909
type: Gene
SIO_000068: ncbigene

position:7656:1
position: 7656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7928:1
position: 7928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7656-7928:1:exon

TTH_RS11310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 300852
locus tag: TTH_RS11310
old locus tag: TTHC010
inference: COORDINATES: protein motif:HMM:NF039814.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVRNPMELRIGRLHGLFVEHLLRDPGLREALPHPFVLVALDPSDPELMAYALEAAKRSAGEGPMVYALFQGEELRLIIAPEGPILPARAA
SIO_010081: TTH_RS11310
subclass of: SO_0000673
so part of: TTH_RS11310
location: 7656..7928
location: region:7656-7928:1
so has part: feature:7656-7928:1:exon

WP_011171670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7656-7928:1:exon

TTH_RS11315
type: Gene
subclass of: SO_0000704
RO_0002162: 300852
locus tag: TTH_RS11315
old locus tag: TTHC011
so part of: sequence
location: complement(7925..8137)
location: region:7925-8137:-1
so has part: feature:7925-8137:-1:exon
subclass of: SO_0000010

3167911
type: Gene
SIO_000068: ncbigene

position:7925:-1
position: 7925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8137:-1
position: 8137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7925-8137:-1:exon

TTH_RS11315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 300852
locus tag: TTH_RS11315
old locus tag: TTHC011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015718308.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2283 domain-containing protein
translation: MEPEADALYIAFGEAPPPWRRWPRGVALNWDREGRLLGIEILDASHRLSDPKSLSRLLLEALPVWEKAGA
SIO_010081: TTH_RS11315
subclass of: SO_0000673
so part of: TTH_RS11315
location: complement(7925..8137)
location: region:7925-8137:-1
so has part: feature:7925-8137:-1:exon

WP_011229283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7925-8137:-1:exon

TTH_RS11320
type: Gene
subclass of: SO_0000704
RO_0002162: 300852
locus tag: TTH_RS11320
old locus tag: TTHC012
so part of: sequence
location: 8223..8435
location: region:8223-8435:1
so has part: feature:8223-8435:1:exon
subclass of: SO_0000010

3167914
type: Gene
SIO_000068: ncbigene

position:8223:1
position: 8223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8435:1
position: 8435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8223-8435:1:exon

TTH_RS11320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 300852
locus tag: TTH_RS11320
old locus tag: TTHC012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018145948.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6290 family protein
translation: MVVVRLPKEIEERLTALARKTGRSKSYYVRQALLEYLDDLEDYYLAVERLEERLPGIPLDEVERRLGLSD
SIO_010081: TTH_RS11320
subclass of: SO_0000673
so part of: TTH_RS11320
location: 8223..8435
location: region:8223-8435:1
so has part: feature:8223-8435:1:exon

WP_011171671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8223-8435:1:exon

TTH_RS11325
type: Gene
subclass of: SO_0000704
RO_0002162: 300852
locus tag: TTH_RS11325
old locus tag: TTHC013
so part of: sequence
location: 8419..8688
location: region:8419-8688:1
so has part: feature:8419-8688:1:exon
subclass of: SO_0000010

3167919
type: Gene
SIO_000068: ncbigene

position:8419:1
position: 8419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8688:1
position: 8688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8419-8688:1:exon

TTH_RS11325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 300852
locus tag: TTH_RS11325
old locus tag: TTHC013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013012676.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MGYRIEFDPRAEKELEKLDREVARRILRFLRERVATLEDPRSLGEPLRGPELGRFWKYRVGDYRLICHIQDREATVLVLRVGHRRDVYR
SIO_010081: TTH_RS11325
subclass of: SO_0000673
so part of: TTH_RS11325
location: 8419..8688
location: region:8419-8688:1
so has part: feature:8419-8688:1:exon

WP_011171672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8419-8688:1:exon

TTH_RS11330
type: Gene
subclass of: SO_0000704
RO_0002162: 300852
locus tag: TTH_RS11330
old locus tag: TTHC014
so part of: sequence
location: 8771..9208
location: region:8771-9208:1
so has part: feature:8771-9208:1:exon
subclass of: SO_0000010

3167913
type: Gene
SIO_000068: ncbigene

position:8771:1
position: 8771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9208:1
position: 9208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8771-9208:1:exon

TTH_RS11330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 300852
locus tag: TTH_RS11330
old locus tag: TTHC014
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003049650.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MEHPEGEDPTLLPPALAARALGVSPATLRRYAALWERLVGPLPRDPRGGRLWPKEALARLRAAREAHLREGLPLEEALARVQGDFPALALPSEGEALALLRALAERLERVEGELRALREENARLREALKALEPPRRRPWWRFWGH
SIO_010081: TTH_RS11330
subclass of: SO_0000673
so part of: TTH_RS11330
location: 8771..9208
location: region:8771-9208:1
so has part: feature:8771-9208:1:exon

WP_011229284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8771-9208:1:exon