Drosophila busckii strain San Diego stock center, stock number 13000-0081.31 chromosome 4, ASM1175060v1, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila.
Hi-C guided assemblies reveal conserved regulatory topologies on X and autosomes despite extensive genome shuffling
REFSEQ INFORMATION: The reference sequence is identical to\nCM022250.1.\nAssembly name: ASM1175060v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Max Planck Institute of\nImmunobiology and Epigenetics on 2020/03/26. The original\nwhole-genome shotgun project has the accession DULD00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Max Planck Institute of Immunobiology and\n Epigenetics\nAssembly Method :: SparseAssembler v. 20160205; DBG2OLC v.\n 20160205; HiCAssembler v. 1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 156x Illumina; 20x PacBio; 17x Hi-C\nSequencing Technology :: Illumina; PacBio RSII; Hi-C (Illumina\n HiSeq)\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Drosophila busckii Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
San Diego stock center, stock number 13000-0081.31
Derived by automated computational analysis using gene prediction method: Gnomon.
kinesin-II 95 kDa subunit, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
kinesin-II 95 kDa subunit, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
osmotic avoidance abnormal protein 3 isoform X1
glutamate receptor ionotropic, kainate 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
glutamate receptor ionotropic, kainate 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
glutamate receptor ionotropic, kainate 2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
glutamate receptor ionotropic, kainate 2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
glutamate receptor ionotropic, kainate 2 isoform X1
glutamate receptor ionotropic, kainate 2 isoform X3
glutamate receptor ionotropic, kainate 2 isoform X2
glutamate receptor ionotropic, kainate 2 isoform X4
ADP-ribosylation factor-like protein 4C, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
ADP-ribosylation factor-like protein 4C isoform X1
ADP-ribosylation factor-like protein 4C, transcript variant X2
ADP-ribosylation factor-like protein 4A isoform X2
uncharacterized LOC108607395, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC108607395, transcript variant X4
uncharacterized LOC108607395, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC108607395, transcript variant X1
uncharacterized LOC108607395, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC108607395, transcript variant X6
uncharacterized protein LOC108607395 isoform X1
uncharacterized protein LOC108607395 isoform X5
uncharacterized protein LOC108607395 isoform X2
uncharacterized protein LOC108607395 isoform X3
uncharacterized protein LOC108607395 isoform X4
uncharacterized protein LOC108607395 isoform X6
uncharacterized LOC108607395, transcript variant X7
uncharacterized protein LOC108607395 isoform X7
zwei Ig domain protein zig-8, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
zwei Ig domain protein zig-8, transcript variant X5
zwei Ig domain protein zig-8, transcript variant X2
zwei Ig domain protein zig-8, transcript variant X1
zwei Ig domain protein zig-8, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized protein LOC108607406 isoform X1
eukaryotic translation initiation factor 4 gamma 1, transcript variant X1
eukaryotic translation initiation factor 4 gamma 1, transcript variant X2
eukaryotic translation initiation factor 4 gamma 1 isoform X1
eukaryotic translation initiation factor 4 gamma 1 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC108607364, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC108607364, transcript variant X1
uncharacterized LOC108607364, transcript variant X3
uncharacterized protein LOC108607364 isoform X1
uncharacterized protein LOC108607364 isoform X2
uncharacterized protein LOC108607364 isoform X3
paired box protein Pax-6, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
paired box protein Pax-6, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
paired box protein Pax-6, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
eukaryotic translation initiation factor 5A
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
ATP synthase subunit beta, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
calcium/calmodulin-dependent protein kinase type II alpha chain, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
calcium/calmodulin-dependent protein kinase type II alpha chain, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
calcium/calmodulin-dependent protein kinase type II alpha chain, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
calcium/calmodulin-dependent protein kinase type II alpha chain, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
calcium/calmodulin-dependent protein kinase type II alpha chain, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
calcium/calmodulin-dependent protein kinase type II alpha chain, transcript variant X1
calcium/calmodulin-dependent protein kinase type II alpha chain isoform X6
calcium/calmodulin-dependent protein kinase type II alpha chain isoform X5
calcium/calmodulin-dependent protein kinase type II alpha chain isoform X3
calcium/calmodulin-dependent protein kinase type II alpha chain isoform X4
calcium/calmodulin-dependent protein kinase type II alpha chain isoform X2
calcium/calmodulin-dependent protein kinase type II alpha chain isoform X1
calcium/calmodulin-dependent protein kinase type II alpha chain, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
calcium/calmodulin-dependent protein kinase type II alpha chain, transcript variant X8
calcium/calmodulin-dependent protein kinase type II alpha chain isoform X7
calcium/calmodulin-dependent protein kinase type II alpha chain, transcript variant X9
calcium/calmodulin-dependent protein kinase type II alpha chain isoform X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
tau-tubulin kinase homolog Asator, transcript variant X2
tau-tubulin kinase homolog Asator, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
tau-tubulin kinase homolog Asator isoform X2
tau-tubulin kinase homolog Asator isoform X1
zinc finger protein 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
zinc finger protein 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
zinc finger protein 2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
microphthalmia-associated transcription factor, transcript variant X3
microphthalmia-associated transcription factor isoform X3
microphthalmia-associated transcription factor, transcript variant X2
microphthalmia-associated transcription factor, transcript variant X1
microphthalmia-associated transcription factor isoform X1
microphthalmia-associated transcription factor isoform X2
microphthalmia-associated transcription factor, transcript variant X4
uncharacterized protein LOC108607392 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC108607351, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized protein LOC108607351 isoform X1
uncharacterized LOC108607351, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized protein LOC108607351 isoform X3
uncharacterized LOC108607351, transcript variant X2
uncharacterized protein LOC108607351 isoform X2
transcriptional activator cubitus interruptus
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
forkhead box protein O1-B, transcript variant X2
forkhead box protein O1-B, transcript variant X1
uncharacterized protein LOC108607354 isoform X2
protein pangolin, isoforms A/H/I/S, transcript variant X7
protein pangolin, isoforms A/H/I/S, transcript variant X6
protein pangolin, isoforms A/H/I/S, transcript variant X8
protein pangolin, isoforms A/H/I/S, transcript variant X9
protein pangolin, isoforms A/H/I/S, transcript variant X5
protein pangolin, isoforms A/H/I/S, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
protein pangolin, isoforms A/H/I/S, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
protein pangolin, isoforms A/H/I/S, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
protein pangolin, isoforms A/H/I/S isoform X6
protein pangolin, isoforms A/H/I/S isoform X5
protein pangolin, isoforms A/H/I/S, transcript variant X11
protein pangolin, isoforms A/H/I/S, transcript variant X4
protein pangolin, isoforms A/H/I/S isoform X8
protein pangolin, isoforms A/H/I/S, transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
calcium-dependent secretion activator, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
calcium-dependent secretion activator, transcript variant X5
calcium-dependent secretion activator, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
calcium-dependent secretion activator, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
calcium-dependent secretion activator, transcript variant X2
calcium-dependent secretion activator, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
calcium-dependent secretion activator isoform X1
calcium-dependent secretion activator isoform X3
calcium-dependent secretion activator isoform X2
calcium-dependent secretion activator isoform X4
calcium-dependent secretion activator isoform X5
adapter molecule Crk, transcript variant X2
adapter molecule Crk, transcript variant X3
adapter molecule Crk, transcript variant X1
adapter molecule Crk, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
adapter molecule Crk, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
adapter molecule Crk, transcript variant X5
transmembrane protein 104 homolog, transcript variant X1
transmembrane protein 104 homolog, transcript variant X3
transmembrane protein 104 homolog, transcript variant X2
transmembrane protein 104 homolog isoform X1
transmembrane protein 104 homolog isoform X3
transmembrane protein 104 homolog isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
inactive rhomboid protein 1, transcript variant X1
inactive rhomboid protein 1, transcript variant X3
inactive rhomboid protein 1, transcript variant X2
probable H/ACA ribonucleoprotein complex subunit 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
probable cation-transporting ATPase 13A3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
probable cation-transporting ATPase 13A3, transcript variant X2
probable cation-transporting ATPase 13A3 isoform X1
probable cation-transporting ATPase 13A3 isoform X2
probable cation-transporting ATPase 13A3, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
probable cation-transporting ATPase 13A3, transcript variant X3
probable cation-transporting ATPase 13A3 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC108607403, transcript variant X1
uncharacterized LOC108607403, transcript variant X2
uncharacterized protein LOC108607403 isoform X1
uncharacterized protein LOC108607403 isoform X2
tetratricopeptide repeat protein 39B, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
tetratricopeptide repeat protein 39B, transcript variant X2
tetratricopeptide repeat protein 39B, transcript variant X3
tetratricopeptide repeat protein 39B isoform X2
tetratricopeptide repeat protein 39B isoform X1
tetratricopeptide repeat protein 39B isoform X3
tetratricopeptide repeat protein 39B, transcript variant X4
tetratricopeptide repeat protein 39B isoform X4
ATP-binding cassette sub-family D member
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC108607348, transcript variant X1
uncharacterized LOC108607348, transcript variant X2
RNA-binding protein MEX3B, transcript variant X5
uncharacterized protein LOC108607419 isoform X3
RNA-binding protein MEX3B, transcript variant X2
RNA-binding protein MEX3B, transcript variant X1
RNA-binding protein MEX3B, transcript variant X3
RNA-binding protein MEX3B, transcript variant X4
slo-interacting protein 1, transcript variant X2
slo-interacting protein 1, transcript variant X1
slo-interacting protein 1, transcript variant X3
uncharacterized LOC108607426, transcript variant X3
uncharacterized LOC108607426, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC108607426, transcript variant X1
uncharacterized LOC108607426, transcript variant X2
uncharacterized protein LOC108607426 isoform X1
uncharacterized protein LOC108607426 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
mediator of RNA polymerase II transcription subunit 26
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
dual specificity protein kinase splA isoform X1
ubiquitin carboxyl-terminal hydrolase 36 isoform X2
ubiquitin carboxyl-terminal hydrolase 36 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: GIGYF family protein CG11148
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 66% coverage of the annotated genomic feature by RNAseq alignments
protein unc-13 homolog B, transcript variant X1
protein unc-13 homolog B, transcript variant X3
protein unc-13 homolog B, transcript variant X2
protein unc-13 homolog B, transcript variant X4
protein unc-13 homolog B, transcript variant X5
uncharacterized protein LOC108607362 isoform X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
UV excision repair protein RAD23 homolog A
RING finger protein 11, transcript variant X3
RING finger protein 11, transcript variant X1
RING finger protein 11, transcript variant X2
RING finger protein 11, transcript variant X4
plasma membrane calcium-transporting ATPase 3, transcript variant X6
plasma membrane calcium-transporting ATPase 3, transcript variant X3
plasma membrane calcium-transporting ATPase 3, transcript variant X4
plasma membrane calcium-transporting ATPase 3, transcript variant X5
plasma membrane calcium-transporting ATPase 2 isoform X5
plasma membrane calcium-transporting ATPase 2 isoform X6
plasma membrane calcium-transporting ATPase 2 isoform X4
plasma membrane calcium-transporting ATPase 2 isoform X3
plasma membrane calcium-transporting ATPase 3, transcript variant X1
plasma membrane calcium-transporting ATPase 3, transcript variant X2
plasma membrane calcium-transporting ATPase 2 isoform X2
plasma membrane calcium-transporting ATPase 2 isoform X1
plasma membrane calcium-transporting ATPase 3, transcript variant X8
plasma membrane calcium-transporting ATPase 3, transcript variant X7
plasma membrane calcium-transporting ATPase 3 isoform X8
plasma membrane calcium-transporting ATPase 3 isoform X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
43 kDa receptor-associated protein of the synapse, transcript variant X1
43 kDa receptor-associated protein of the synapse, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
43 kDa receptor-associated protein of the synapse homolog isoform X1
43 kDa receptor-associated protein of the synapse isoform X2
homeobox protein onecut, transcript variant X2
homeobox protein onecut, transcript variant X3
homeobox protein onecut, transcript variant X4
homeobox protein onecut, transcript variant X1
homeobox protein onecut, transcript variant X6
homeobox protein onecut, transcript variant X7
homeobox protein onecut, transcript variant X5
homeobox protein onecut, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
sodium- and chloride-dependent GABA transporter 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
glutamate receptor ionotropic, kainate 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
glutamate receptor ionotropic, kainate 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
glutamate receptor ionotropic, kainate 1, transcript variant X4
glutamate receptor ionotropic, kainate 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
glutamate receptor ionotropic, kainate 1, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
glutamate receptor ionotropic, kainate 1 isoform X5
uncharacterized LOC108607335, transcript variant X2
uncharacterized LOC108607335, transcript variant X1
uncharacterized protein LOC108607335 isoform X2
uncharacterized protein LOC108607335 isoform X1
uncharacterized LOC108607335, transcript variant X3
uncharacterized protein LOC108607335 isoform X3
transcriptional activator protein Pur-beta, transcript variant X1
transcriptional activator protein Pur-beta, transcript variant X4
transcriptional activator protein Pur-beta, transcript variant X2
transcriptional activator protein Pur-beta, transcript variant X3
transcriptional activator protein Pur-alpha isoform X1
transcriptional activator protein Pur-beta isoform X2
NADH-ubiquinone oxidoreductase 49 kDa subunit
uncharacterized LOC108607322, transcript variant X2
uncharacterized LOC108607322, transcript variant X1
uncharacterized LOC108607322, transcript variant X3
uncharacterized protein LOC108607322 isoform X2
uncharacterized protein LOC108607322 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
calcium/calmodulin-dependent protein kinase type 1, transcript variant X2
calcium/calmodulin-dependent protein kinase type 1, transcript variant X3
calcium/calmodulin-dependent protein kinase type 1, transcript variant X1
calcium/calmodulin-dependent protein kinase type 1 isoform X3
calcium/calmodulin-dependent protein kinase type 1 isoform X2
calcium/calmodulin-dependent protein kinase type 1 isoform X1
calcium/calmodulin-dependent protein kinase type 1, transcript variant X4
calcium/calmodulin-dependent protein kinase type 1 isoform X4
ephrin type-B receptor 1-B, transcript variant X2
ephrin type-B receptor 1-B, transcript variant X1
ephrin type-B receptor 1-B, transcript variant X3
uncharacterized protein DDB_G0283357, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized protein DDB_G0283357, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized protein DDB_G0283357 isoform X2
uncharacterized protein DDB_G0283357, transcript variant X1
GATA zinc finger domain-containing protein 14 isoform X1