Lonchura striata domestica isolate Mets1 chromosome 29, lonStrDom2, whole genome shotgun sequence.
type: Entry
definition: Lonchura striata domestica isolate Mets1 chromosome 29, lonStrDom2, whole genome shotgun sequence.
sequence version: NC_042594.1
sequence date: 2019-11-05
sequence: sequence
division: CON
label: NC_042594.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA391487
dblink: SAMN11521339
keyword: WGS
keyword: RefSeq
source: Lonchura striata domestica (Bengalese finch)
organism: Lonchura striata domestica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016790.1.\nAssembly name: lonStrDom2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the HHMI/UCSF on 2019/06/05. The\noriginal whole-genome shotgun project has the accession\nSWKX00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: HHMI/UCSF\nAssembly Date :: 30-NOV-2018\nAssembly Method :: AllPaths v. JAN-2015; HiRise v.\n NOV-2018\nAssembly Name :: lonStrDom2\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: GCA_002197715.1\nGenome Coverage :: 151.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Lonchura striata domestica\n Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 3381876
topology: linear
so has quality: SO_0000987
location: 1..3381876
location: region:1-3381876:1
RO_0002162: 299123

NC_042594
type: RefSeq
SIO_000068: refseq

PRJNA391487
type: BioProject
SIO_000068: bioproject

SAMN11521339
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3381876:1
position: 3381876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-3381876:1:source
so part of: sequence
organism: Lonchura striata domestica
mol type: genomic DNA
isolate: Mets1
sub species: domestica
chromosome: 29
sex: male
tissue type: blood
dev stage: adult

299123
type: Taxonomy
SIO_000068: taxonomy

LOC110480537
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110480537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 33902..94113
location: region:33902-94113:1
so has part: feature:33902-94113:1:exon
subclass of: SO_0000010

110480537
type: Gene
SIO_000068: ncbigene

position:33902:1
position: 33902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94113:1
position: 94113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33902-94113:1:exon

LOC110480537
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110480537
product: cyclic AMP-dependent transcription factor ATF-7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031507257.1
SIO_010081: LOC110480537
subclass of: SO_0000673
so part of: LOC110480537
location: join(33902..33963,56276..56422,61645..61741,67209..67354,72420..72554,74853..75010,75802..75901,79779..79973,83353..83804,93993..94113)
location: region:33902-94113:1
so has part: feature:33902-33963:1:exon
so has part: feature:56276-56422:1:exon
so has part: feature:61645-61741:1:exon
so has part: feature:67209-67354:1:exon
so has part: feature:72420-72554:1:exon
so has part: feature:74853-75010:1:exon
so has part: feature:75802-75901:1:exon
so has part: feature:79779-79973:1:exon
so has part: feature:83353-83804:1:exon
so has part: feature:93993-94113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33902-33963:1:exon

position:33963:1
position: 33963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:56276-56422:1:exon

position:56276:1
position: 56276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56422:1
position: 56422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:61645-61741:1:exon

position:61645:1
position: 61645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61741:1
position: 61741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:67209-67354:1:exon

position:67209:1
position: 67209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67354:1
position: 67354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:72420-72554:1:exon

position:72420:1
position: 72420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72554:1
position: 72554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:74853-75010:1:exon

position:74853:1
position: 74853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75010:1
position: 75010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:75802-75901:1:exon

position:75802:1
position: 75802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75901:1
position: 75901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:79779-79973:1:exon

position:79779:1
position: 79779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79973:1
position: 79973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:83353-83804:1:exon

position:83353:1
position: 83353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83804:1
position: 83804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:93993-94113:1:exon

position:93993:1
position: 93993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110480537
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110480537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7
translation: MGDDRPFVCGAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIAGMCPASPPRLMPGTRCTRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIAAPGPARRPLGAADACRAQPGTHIGSIDRWPRIRSQSAALLGNKLREPGRSSGALDVSLPPTPDMKIKEEEPLEVDSSPPDSPAPRPRSAPRRDKESPSKPVVLSAPTPTIVRPGSLPLHLGYEPLHPTLPSPTSVITQAPPSNRQLGSPGGSLPLVVQLANGQAVPVLPGPAVQMPSVISVSPAQPTATGGRRRRAADEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSKYPRNIQKYPRNVLEISQKYPEIPRNTPEISSNAPAMPQQYPEIPQQYPEMSQKYPRNTSEIPQKYPAIPSNTPEIPQKYPEISQKYPRNTQQYPAIPQKYLRNTQKYPRNIPEIPSNTPEIPRNILKYPRNIQKYPRNTPGPLSALLCPGPAHAGAPKRAREVPKGHGRRVLGAPPTPQLLCATSFDDQ
SIO_010081: LOC110480537
subclass of: SO_0000673
so part of: LOC110480537
location: join(33916..33963,56276..56422,61645..61741,67209..67354,72420..72554,74853..75010,75802..75901,79779..79973,83353..83804,93993..94113)
location: region:33916-94113:1
so has part: feature:33916-33963:1:exon
so has part: feature:56276-56422:1:exon
so has part: feature:61645-61741:1:exon
so has part: feature:67209-67354:1:exon
so has part: feature:72420-72554:1:exon
so has part: feature:74853-75010:1:exon
so has part: feature:75802-75901:1:exon
so has part: feature:79779-79973:1:exon
so has part: feature:83353-83804:1:exon
so has part: feature:93993-94113:1:exon

XP_031363117.1
type: Protein
SIO_000068: ncbiprotein

position:33916:1
position: 33916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33916-33963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56276-56422:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61645-61741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67209-67354:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:72420-72554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:74853-75010:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75802-75901:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:79779-79973:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83353-83804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:93993-94113:1:exon

NPFF
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: NPFF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 95591..96208
location: region:95591-96208:1
so has part: feature:95591-96208:1:exon
subclass of: SO_0000010

110480536
type: Gene
SIO_000068: ncbigene

position:95591:1
position: 95591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96208:1
position: 96208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95591-96208:1:exon

NPFF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NPFF
product: neuropeptide FF-amide peptide precursor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021548557.2
SIO_010081: NPFF
subclass of: SO_0000673
so part of: NPFF
location: join(95591..95868,96070..96208)
location: region:95591-96208:1
so has part: feature:95591-95868:1:exon
so has part: feature:96070-96208:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95591-95868:1:exon

position:95868:1
position: 95868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96070-96208:1:exon

position:96070:1
position: 96070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPFF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NPFF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pro-FMRFamide-related neuropeptide FF
translation: MAGRPVLLLLLLLLAATPRSARACPGSPGPAPVSPGPAERGLRLVGGLSGWARGSLSGSRTAVSPGPPPPQAAAAALGALLRSLRRPGRAPGSAALSPRRWGWGPQGSPQARLSPRSWDPPVAPFWTMATPQRFGRRR
SIO_010081: NPFF
subclass of: SO_0000673
so part of: NPFF
location: join(95591..95868,96070..96208)
location: region:95591-96208:1
so has part: feature:95591-95868:1:exon
so has part: feature:96070-96208:1:exon

XP_021404232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95591-95868:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96070-96208:1:exon

TARBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TARBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(96994..111057)
location: region:96994-111057:-1
so has part: feature:96994-111057:-1:exon
subclass of: SO_0000010

110480525
type: Gene
SIO_000068: ncbigene

position:96994:-1
position: 96994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111057:-1
position: 111057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96994-111057:-1:exon

TARBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TARBP2
product: TARBP2 subunit of RISC loading complex
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031507243.1
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: complement(join(96994..97160,97229..97418,98091..98218,98286..98403,102309..102465,108363..108462,108839..109008,111005..111057))
location: region:96994-111057:-1
so has part: feature:111005-111057:-1:exon
so has part: feature:108839-109008:-1:exon
so has part: feature:108363-108462:-1:exon
so has part: feature:102309-102465:-1:exon
so has part: feature:98286-98403:-1:exon
so has part: feature:98091-98218:-1:exon
so has part: feature:97229-97418:-1:exon
so has part: feature:96994-97160:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111005-111057:-1:exon

position:111005:-1
position: 111005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108839-109008:-1:exon

position:108839:-1
position: 108839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109008:-1
position: 109008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:108363-108462:-1:exon

position:108363:-1
position: 108363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108462:-1
position: 108462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:102309-102465:-1:exon

position:102309:-1
position: 102309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102465:-1
position: 102465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:98286-98403:-1:exon

position:98286:-1
position: 98286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98403:-1
position: 98403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:98091-98218:-1:exon

position:98091:-1
position: 98091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98218:-1
position: 98218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:97229-97418:-1:exon

position:97229:-1
position: 97229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97418:-1
position: 97418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:96994-97160:-1:exon

position:97160:-1
position: 97160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TARBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TARBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RISC-loading complex subunit TARBP2
translation: MSEEGAGGARRSGGAFPSLEQMVAASPGKTPISLLQEYGTRLGRTPGYDLLKAEGQAHQPNFTFRVTLGDISCTGQGPSKKAAKHKAAEVALRLLRGGGAMLEPLEHSRAPTPKPPGPSGPLPRGPGRPLTPVPHRGPPLEMKTPVSPPQSECNPVGALQXXVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFVEIGSGTSKKLAKRNAAAKMLVRIHNVPMEPRDGSEAEGEEDQFNMTCPRLEGLRGRAPGCTWDSLRNSAGEKLGQLRSRGGNPAPGGACALLQELSEEQSFAISYLDIDALSLSGLHQCLVELSTQPTTVCHGSAPSRDGARAQAARNALQYLRIMAGGK
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: complement(join(97003..97160,97229..97418,98091..98218,98286..98403,102309..102465,108363..108462,108839..109008,111005..111057))
location: region:97003-111057:-1
so has part: feature:111005-111057:-1:exon
so has part: feature:108839-109008:-1:exon
so has part: feature:108363-108462:-1:exon
so has part: feature:102309-102465:-1:exon
so has part: feature:98286-98403:-1:exon
so has part: feature:98091-98218:-1:exon
so has part: feature:97229-97418:-1:exon
so has part: feature:97003-97160:-1:exon

XP_031363103.1
type: Protein
SIO_000068: ncbiprotein

position:97003:-1
position: 97003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111005-111057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108839-109008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108363-108462:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102309-102465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98286-98403:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98091-98218:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97229-97418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97003-97160:-1:exon

MAP3K12
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MAP3K12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <115789..122255
location: region:115789-122255:1
so has part: feature:115789-122255:1:exon
subclass of: SO_0000010

110480535
type: Gene
SIO_000068: ncbigene

position:115789:1
position: 115789
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:122255:1
position: 122255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115789-122255:1:exon

MAP3K12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MAP3K12
product: mitogen-activated protein kinase kinase kinase 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031507199.1
SIO_010081: MAP3K12
subclass of: SO_0000673
so part of: MAP3K12
location: join(<115789..115988,116463..116654,117407..117565,117798..117956,118083..118191,118729..118838,119610..119726,119964..120101,120550..120988,121165..121235,121323..121575,122081..122255)
location: region:115789-122255:1
so has part: feature:115789-115988:1:exon
so has part: feature:116463-116654:1:exon
so has part: feature:117407-117565:1:exon
so has part: feature:117798-117956:1:exon
so has part: feature:118083-118191:1:exon
so has part: feature:118729-118838:1:exon
so has part: feature:119610-119726:1:exon
so has part: feature:119964-120101:1:exon
so has part: feature:120550-120988:1:exon
so has part: feature:121165-121235:1:exon
so has part: feature:121323-121575:1:exon
so has part: feature:122081-122255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115789-115988:1:exon

position:115988:1
position: 115988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:116463-116654:1:exon

position:116463:1
position: 116463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116654:1
position: 116654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:117407-117565:1:exon

position:117407:1
position: 117407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117565:1
position: 117565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:117798-117956:1:exon

position:117798:1
position: 117798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117956:1
position: 117956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:118083-118191:1:exon

position:118083:1
position: 118083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118191:1
position: 118191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:118729-118838:1:exon

position:118729:1
position: 118729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118838:1
position: 118838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:119610-119726:1:exon

position:119610:1
position: 119610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119726:1
position: 119726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:119964-120101:1:exon

position:119964:1
position: 119964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120101:1
position: 120101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:120550-120988:1:exon

position:120550:1
position: 120550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120988:1
position: 120988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:121165-121235:1:exon

position:121165:1
position: 121165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121235:1
position: 121235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:121323-121575:1:exon

position:121323:1
position: 121323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121575:1
position: 121575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:122081-122255:1:exon

position:122081:1
position: 122081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAP3K12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MAP3K12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 12
translation: PRVPADPWEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKETDIKHLRKLKHPNIITFKGVCTQAPCYCIIMEFCAQGQLYEVLRAGRKVTPSLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELIDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKVLLRQCWNSKPRNRPSFRQILLHLDIASADVLSTPQETYFKSQAEWREEVKLHFEKIKSEGTCLHRLEEELINRRREELRHALDIREHYERKLERANNLYMELSALMLQLELKEKELLRREQALEKRYPGLFKPRVPRGLLHGNAVETLIKKRNVPQKLSPHGKRPDILKPEVLLPKLDAAMAQVALPGCPKGPPSPGRSRRAKGRHRKAGPRGGCAEPGPEAGTPRGPPATAASPDILGGTLEAAGAPPAAVPDAGPEGATGTQGSPPPQPPTPGEPERESGAGRGGKGGAGQHLTPAALLYRAAVTRGQKRGVSSEEEEGEVDSEVELPLRQRWPPGMSKRQSLSTFSSENFSDGDGDEGHTSEPSHSATPDVGSTNTDERPDDRSEDLLSQGSEIPLDAAPPEGPGRRLGGLSPTKVSEDSDCDSAELDHSGSGEGPPRPTAPPGL
SIO_010081: MAP3K12
subclass of: SO_0000673
so part of: MAP3K12
location: join(<115789..115988,116463..116654,117407..117565,117798..117956,118083..118191,118729..118838,119610..119726,119964..120101,120550..120988,121165..121235,121323..121575,122081..122173)
location: region:115789-122173:1
so has part: feature:115789-115988:1:exon
so has part: feature:116463-116654:1:exon
so has part: feature:117407-117565:1:exon
so has part: feature:117798-117956:1:exon
so has part: feature:118083-118191:1:exon
so has part: feature:118729-118838:1:exon
so has part: feature:119610-119726:1:exon
so has part: feature:119964-120101:1:exon
so has part: feature:120550-120988:1:exon
so has part: feature:121165-121235:1:exon
so has part: feature:121323-121575:1:exon
so has part: feature:122081-122173:1:exon

XP_031363059.1
type: Protein
SIO_000068: ncbiprotein

position:122173:1
position: 122173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115789-115988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116463-116654:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:117407-117565:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117798-117956:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118083-118191:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118729-118838:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119610-119726:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:119964-120101:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120550-120988:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:121165-121235:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:121323-121575:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:122081-122173:1:exon

PCBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(122750..134398)
location: region:122750-134398:-1
so has part: feature:122750-134398:-1:exon
subclass of: SO_0000010

110480522
type: Gene
SIO_000068: ncbigene

position:122750:-1
position: 122750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134398:-1
position: 134398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122750-134398:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021548541.2
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(122750..123305,125369..125538,126048..126100,126956..126994,127428..127500,128427..128468,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134391))
location: region:122750-134391:-1
so has part: feature:134253-134391:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:128427-128468:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126956-126994:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:122750-123305:-1:exon

position:134391:-1
position: 134391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134391:-1:exon

position:134253:-1
position: 134253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

position:133901:-1
position: 133901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133924:-1
position: 133924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

position:133756:-1
position: 133756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133788:-1
position: 133788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

position:133413:-1
position: 133413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133529:-1
position: 133529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

position:132099:-1
position: 132099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132230:-1
position: 132230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

position:131429:-1
position: 131429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131557:-1
position: 131557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

position:130968:-1
position: 130968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131042:-1
position: 131042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:128427-128468:-1:exon

position:128427:-1
position: 128427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128468:-1
position: 128468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:127428-127500:-1:exon

position:127428:-1
position: 127428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127500:-1
position: 127500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:126956-126994:-1:exon

position:126956:-1
position: 126956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126994:-1
position: 126994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:126048-126100:-1:exon

position:126048:-1
position: 126048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126100:-1
position: 126100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:125369-125538:-1:exon

position:125369:-1
position: 125369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125538:-1
position: 125538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:122750-123305:-1:exon

position:123305:-1
position: 123305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021548539.2
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(122750..123305,125369..125538,126048..126100,126956..126994,127428..127500,128427..128468,129559..129645,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134390))
location: region:122750-134390:-1
so has part: feature:134253-134390:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:129559-129645:-1:exon
so has part: feature:128427-128468:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126956-126994:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:122750-123305:-1:exon

position:134390:-1
position: 134390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129559-129645:-1:exon

position:129559:-1
position: 129559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129645:-1
position: 129645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:128427-128468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126956-126994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:122750-123305:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021548540.2
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(122750..123305,125369..125538,126048..126100,127428..127500,128427..128468,129559..129645,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134389))
location: region:122750-134389:-1
so has part: feature:134253-134389:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:129559-129645:-1:exon
so has part: feature:128427-128468:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:122750-123305:-1:exon

position:134389:-1
position: 134389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134389:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129559-129645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:128427-128468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:122750-123305:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X10
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(123269..123305,125369..125538,126048..126100,126956..126994,127428..127500,128427..128468,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134321))
location: region:123269-134321:-1
so has part: feature:134253-134321:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:128427-128468:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126956-126994:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:123269-123305:-1:exon

XP_021404216.1
type: Protein
SIO_000068: ncbiprotein

position:123269:-1
position: 123269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134321:-1
position: 134321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128427-128468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:126956-126994:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:123269-123305:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X9
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(123269..123305,125369..125538,126048..126100,127428..127500,128427..128468,129559..129645,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134321))
location: region:123269-134321:-1
so has part: feature:134253-134321:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:129559-129645:-1:exon
so has part: feature:128427-128468:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:123269-123305:-1:exon

XP_021404215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129559-129645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:128427-128468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:123269-123305:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X8
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(123269..123305,125369..125538,126048..126100,126956..126994,127428..127500,128427..128468,129559..129645,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134321))
location: region:123269-134321:-1
so has part: feature:134253-134321:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:129559-129645:-1:exon
so has part: feature:128427-128468:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126956-126994:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:123269-123305:-1:exon

XP_021404214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129559-129645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:128427-128468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126956-126994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:123269-123305:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021548536.2
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(124262..124604,125369..125538,126048..126100,126956..126994,127428..127500,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134398))
location: region:124262-134398:-1
so has part: feature:134253-134398:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126956-126994:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:124262-124604:-1:exon

position:124262:-1
position: 124262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126956-126994:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:124262-124604:-1:exon

position:124604:-1
position: 124604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021548535.2
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(124262..124604,125369..125538,126048..126100,126956..126994,127428..127500,128427..128468,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134398))
location: region:124262-134398:-1
so has part: feature:134253-134398:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:128427-128468:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126956-126994:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:124262-124604:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128427-128468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:126956-126994:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124262-124604:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021548533.2
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(124262..124604,125369..125538,126048..126100,126956..126994,127428..127500,129559..129645,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134395))
location: region:124262-134395:-1
so has part: feature:134253-134395:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:129559-129645:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126956-126994:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:124262-124604:-1:exon

position:134395:-1
position: 134395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134395:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129559-129645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:126956-126994:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124262-124604:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021548538.2
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(124262..124604,125369..125538,126048..126100,127428..127500,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134394))
location: region:124262-134394:-1
so has part: feature:134253-134394:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:124262-124604:-1:exon

position:134394:-1
position: 134394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134394:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:124262-124604:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021548534.2
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(124262..124604,125369..125538,126048..126100,127428..127500,129559..129645,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134393))
location: region:124262-134393:-1
so has part: feature:134253-134393:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:129559-129645:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:124262-124604:-1:exon

position:134393:-1
position: 134393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129559-129645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:124262-124604:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021548531.2
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(124262..124604,125369..125538,126048..126100,126956..126994,127428..127500,128427..128468,129559..129645,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134393))
location: region:124262-134393:-1
so has part: feature:134253-134393:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:129559-129645:-1:exon
so has part: feature:128427-128468:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126956-126994:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:124262-124604:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129559-129645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:128427-128468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126956-126994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:124262-124604:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021548532.2
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(124262..124604,125369..125538,126048..126100,127428..127500,128427..128468,129559..129645,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134392))
location: region:124262-134392:-1
so has part: feature:134253-134392:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:129559-129645:-1:exon
so has part: feature:128427-128468:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:124262-124604:-1:exon

position:134392:-1
position: 134392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129559-129645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:128427-128468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124262-124604:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X7
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLESAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSTTTPSLATAGASDAPSSLPNPLPTAPCVSSLLGMKPVPLLALNVVSAAKGAAAPAVPCVTNKLKAEKQRFSPY
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(124277..124604,125369..125538,126048..126100,127428..127500,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134321))
location: region:124277-134321:-1
so has part: feature:134253-134321:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:124277-124604:-1:exon

XP_021404213.1
type: Protein
SIO_000068: ncbiprotein

position:124277:-1
position: 124277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:124277-124604:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X6
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMSHGNTGFSGVDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLESAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSTTTPSLATAGASDAPSSLPNPLPTAPCVSSLLGMKPVPLLALNVVSAAKGAAAPAVPCVTNKLKAEKQRFSPY
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(124277..124604,125369..125538,126048..126100,126956..126994,127428..127500,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134321))
location: region:124277-134321:-1
so has part: feature:134253-134321:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126956-126994:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:124277-124604:-1:exon

XP_021404211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126956-126994:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:124277-124604:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X5
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLESAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSTTTPSLATAGASDAPSSLPNPLPTAPCVSSLLGMKPVPLLALNVVSAAKGAAAPAVPCVTNKLKAEKQRFSPY
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(124277..124604,125369..125538,126048..126100,126956..126994,127428..127500,128427..128468,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134321))
location: region:124277-134321:-1
so has part: feature:134253-134321:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:128427-128468:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126956-126994:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:124277-124604:-1:exon

XP_021404210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128427-128468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:126956-126994:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124277-124604:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X4
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQELTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLESAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSTTTPSLATAGASDAPSSLPNPLPTAPCVSSLLGMKPVPLLALNVVSAAKGAAAPAVPCVTNKLKAEKQRFSPY
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(124277..124604,125369..125538,126048..126100,127428..127500,129559..129645,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134321))
location: region:124277-134321:-1
so has part: feature:134253-134321:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:129559-129645:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:124277-124604:-1:exon

XP_021404209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129559-129645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:124277-124604:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X3
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQELTKLHQLAMQQSHFPMSHGNTGFSGVDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLESAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSTTTPSLATAGASDAPSSLPNPLPTAPCVSSLLGMKPVPLLALNVVSAAKGAAAPAVPCVTNKLKAEKQRFSPY
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(124277..124604,125369..125538,126048..126100,126956..126994,127428..127500,129559..129645,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134321))
location: region:124277-134321:-1
so has part: feature:134253-134321:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:129559-129645:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126956-126994:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:124277-124604:-1:exon

XP_021404208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129559-129645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:126956-126994:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124277-124604:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X2
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLESAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSTTTPSLATAGASDAPSSLPNPLPTAPCVSSLLGMKPVPLLALNVVSAAKGAAAPAVPCVTNKLKAEKQRFSPY
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(124277..124604,125369..125538,126048..126100,127428..127500,128427..128468,129559..129645,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134321))
location: region:124277-134321:-1
so has part: feature:134253-134321:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:129559-129645:-1:exon
so has part: feature:128427-128468:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:124277-124604:-1:exon

XP_021404207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129559-129645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:128427-128468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124277-124604:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X1
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLESAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSTTTPSLATAGASDAPSSLPNPLPTAPCVSSLLGMKPVPLLALNVVSAAKGAAAPAVPCVTNKLKAEKQRFSPY
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(124277..124604,125369..125538,126048..126100,126956..126994,127428..127500,128427..128468,129559..129645,130968..131042,131429..131557,132099..132230,133413..133529,133756..133788,133901..133924,134253..134321))
location: region:124277-134321:-1
so has part: feature:134253-134321:-1:exon
so has part: feature:133901-133924:-1:exon
so has part: feature:133756-133788:-1:exon
so has part: feature:133413-133529:-1:exon
so has part: feature:132099-132230:-1:exon
so has part: feature:131429-131557:-1:exon
so has part: feature:130968-131042:-1:exon
so has part: feature:129559-129645:-1:exon
so has part: feature:128427-128468:-1:exon
so has part: feature:127428-127500:-1:exon
so has part: feature:126956-126994:-1:exon
so has part: feature:126048-126100:-1:exon
so has part: feature:125369-125538:-1:exon
so has part: feature:124277-124604:-1:exon

XP_021404206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134253-134321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133901-133924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133756-133788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133413-133529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132099-132230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131429-131557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130968-131042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129559-129645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:128427-128468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:127428-127500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126956-126994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126048-126100:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:125369-125538:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:124277-124604:-1:exon

LOC110480523
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110480523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(137001..137416)
location: region:137001-137416:-1
so has part: feature:137001-137416:-1:exon
subclass of: SO_0000011

110480523
type: Gene
SIO_000068: ncbigene

position:137001:-1
position: 137001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137416:-1
position: 137416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137001-137416:-1:exon

LOC110480523
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110480523
product: uncharacterized LOC110480523
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_002467122.1
SIO_010081: LOC110480523
subclass of: SO_0000673
so part of: LOC110480523
location: complement(join(137001..137236,137313..137416))
location: region:137001-137416:-1
so has part: feature:137313-137416:-1:exon
so has part: feature:137001-137236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137313-137416:-1:exon

position:137313:-1
position: 137313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137001-137236:-1:exon

position:137236:-1
position: 137236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110480539
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110480539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(137536..137982)
location: region:137536-137982:-1
so has part: feature:137536-137982:-1:exon
subclass of: SO_0000011

110480539
type: Gene
SIO_000068: ncbigene

position:137536:-1
position: 137536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137982:-1
position: 137982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137536-137982:-1:exon

LOC110480539
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110480539
product: uncharacterized LOC110480539
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002467123.1
SIO_010081: LOC110480539
subclass of: SO_0000673
so part of: LOC110480539
location: complement(join(137536..137569,137658..137694,137919..137982))
location: region:137536-137982:-1
so has part: feature:137919-137982:-1:exon
so has part: feature:137658-137694:-1:exon
so has part: feature:137536-137569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137919-137982:-1:exon

position:137919:-1
position: 137919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137658-137694:-1:exon

position:137658:-1
position: 137658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137694:-1
position: 137694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:137536-137569:-1:exon

position:137569:-1
position: 137569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SP1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(144423..171956)
location: region:144423-171956:-1
so has part: feature:144423-171956:-1:exon
subclass of: SO_0000010

110480534
type: Gene
SIO_000068: ncbigene

position:144423:-1
position: 144423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171956:-1
position: 171956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144423-171956:-1:exon

SP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SP1
product: Sp1 transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 6 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031507200.1
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: complement(join(144423..144596,145397..145533,145609..145756,146473..146633,146742..146856,147516..147740,148192..148301,148660..148746,149017..149523,150451..150597,160253..160452,161715..161883,168740..170237,170834..170928,171912..171956))
location: region:144423-171956:-1
so has part: feature:171912-171956:-1:exon
so has part: feature:170834-170928:-1:exon
so has part: feature:168740-170237:-1:exon
so has part: feature:161715-161883:-1:exon
so has part: feature:160253-160452:-1:exon
so has part: feature:150451-150597:-1:exon
so has part: feature:149017-149523:-1:exon
so has part: feature:148660-148746:-1:exon
so has part: feature:148192-148301:-1:exon
so has part: feature:147516-147740:-1:exon
so has part: feature:146742-146856:-1:exon
so has part: feature:146473-146633:-1:exon
so has part: feature:145609-145756:-1:exon
so has part: feature:145397-145533:-1:exon
so has part: feature:144423-144596:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171912-171956:-1:exon

position:171912:-1
position: 171912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170834-170928:-1:exon

position:170834:-1
position: 170834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170928:-1
position: 170928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:168740-170237:-1:exon

position:168740:-1
position: 168740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170237:-1
position: 170237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:161715-161883:-1:exon

position:161715:-1
position: 161715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161883:-1
position: 161883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:160253-160452:-1:exon

position:160253:-1
position: 160253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160452:-1
position: 160452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:150451-150597:-1:exon

position:150451:-1
position: 150451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150597:-1
position: 150597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:149017-149523:-1:exon

position:149017:-1
position: 149017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149523:-1
position: 149523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:148660-148746:-1:exon

position:148660:-1
position: 148660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148746:-1
position: 148746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:148192-148301:-1:exon

position:148192:-1
position: 148192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148301:-1
position: 148301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:147516-147740:-1:exon

position:147516:-1
position: 147516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147740:-1
position: 147740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:146742-146856:-1:exon

position:146742:-1
position: 146742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146856:-1
position: 146856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:146473-146633:-1:exon

position:146473:-1
position: 146473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146633:-1
position: 146633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:145609-145756:-1:exon

position:145609:-1
position: 145609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145756:-1
position: 145756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:145397-145533:-1:exon

position:145397:-1
position: 145397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145533:-1
position: 145533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:144423-144596:-1:exon

position:144596:-1
position: 144596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp1
translation: MSDQESTEEMSAVKPDKGEGDASSTSSAGGGDTQESQPSPLALLAATCSRIESPNENSNSSQGQQGGSGELDLNAAAAQLTQSSNGWQIISAGSSTPTGSKEPGSNGSNGGDASKSRPVSTGPYVVTSASGLQNQQVLTGLPGVIPNIQYQVIPQFQTIDGQQLQFATTPAQVNVQQDASGQLQIIPSSNQQIITSRAGGSNLIAMPNLLQQAVPIQGVGLANNSLSGQTQYVANVPVALNGNITLLPVNSVAASLAPTSQTGTLSSSGSPDSSSQPATSGAASSSGSTATSQASSGAFFTNANSYSTTTTTSNVGVMNFSTSATVGTNVQSQTPQRASSVPSSDSLQTPVSGVALQPGQQKEGDQSQQSQQQQQQLLIQPQLVQGGQTIQALQTTPLSGQTFATQAISQDTLQNLQLQAVPNSGPIIIRTPTVGPNGQVSWQTIQLQNLQVQNPQAQTITLAPMQGVSLGQTGSTSTTLTPIASLPSGTVTVNAAQLSSVPGLQTINLSALGASGIQVHQLQGLPLAIANAPGEHGAQLGLHGGSGDGLGDESAAVEEGETSPDPQPQQGRKTRREACTCPYCKEGEGRSSGDPGKKKQHICHVPGCGKVYGKTSHLRAHLRWHTGERPFICTWVLCGKRFTRSDELQRHKRTHTGPHNLTCVSYKHPSVRGALGGAGGAAGAVRCPPGQCCVGIWNRSHALVQGWRGLVLPRGDFGGKRGLIQAGGRERGLVRAGGRERGLIRAGGRAGPGRAGAVGDLLPPQRPRSALALGSGCGGAGEEQLGGTPGSRLSPPLTAPRGDRAAVTVPLSPGCWGGRGDACPSATCAPSPAGHPGSSVLLCLCHGHLCNGNATGTAAATGTAGGLGGPRQGPVPGRGGSAGTLWLLGASPLLILLICLGVLGLRWTRARTGQPPRGGRRIGVPPEPPSPDLPALHFLQVLQSGRFSAVWRGTLRQRPVAIKAFAAGAGRRFAAERAVHALPLMEHENVARLLDTRAAGPRGRGGLLVLQLYPAGSLRHFLGQHVGTWAGSVRLALSLARGLAFLHQELWRDGLYKPSVVHRDLSSQNVLVREDGTCAIGDFGLALALPPRAQDSAGSRHAVTIRKAGTQRYLAPEILDESLDLRAWGRALRQADVYALALLLWEILSRCQALSPGAPVPPFRLAYEAELGSSPTGAQLRRLAADERRRPLIPPAWHRAPQPGGALPELLEDCWDPDPEARLSAERALQRLQRLAAGPAPAPADPGPGAAPRQVRAGN
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: complement(join(144423..144596,145397..145533,145609..145756,146473..146633,146742..146856,147516..147740,148192..148301,148660..148746,149017..149523,150451..150597,160253..160452,161715..161883,168740..170237,170834..170928,171912..171918))
location: region:144423-171918:-1
so has part: feature:171912-171918:-1:exon
so has part: feature:170834-170928:-1:exon
so has part: feature:168740-170237:-1:exon
so has part: feature:161715-161883:-1:exon
so has part: feature:160253-160452:-1:exon
so has part: feature:150451-150597:-1:exon
so has part: feature:149017-149523:-1:exon
so has part: feature:148660-148746:-1:exon
so has part: feature:148192-148301:-1:exon
so has part: feature:147516-147740:-1:exon
so has part: feature:146742-146856:-1:exon
so has part: feature:146473-146633:-1:exon
so has part: feature:145609-145756:-1:exon
so has part: feature:145397-145533:-1:exon
so has part: feature:144423-144596:-1:exon

XP_031363060.1
type: Protein
SIO_000068: ncbiprotein

position:171918:-1
position: 171918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171912-171918:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170834-170928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168740-170237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161715-161883:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160253-160452:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150451-150597:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149017-149523:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148660-148746:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148192-148301:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147516-147740:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:146742-146856:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:146473-146633:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:145609-145756:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145397-145533:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:144423-144596:-1:exon

SP7
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 181415..182413
location: region:181415-182413:1
so has part: feature:181415-182413:1:exon
subclass of: SO_0000010

110480532
type: Gene
SIO_000068: ncbigene

position:181415:1
position: 181415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182413:1
position: 182413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181415-182413:1:exon

SP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SP7
product: Sp7 transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031507251.1
SIO_010081: SP7
subclass of: SO_0000673
so part of: SP7
location: 181415..182413
location: region:181415-182413:1
so has part: feature:181415-182413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181415-182413:1:exon

SP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp7
translation: MGDSYAAAFPSAPGLLSPSASPQASPGPYGPDYGPFGHPFPAPSGAQEVLGAPVVVATKGHPAGECLPGVYPSLEMPHPYGSWYKGGIGGGLPGGSGPAAPSWWDVHPNGGWLGGPAGAEGLQGSLQGQPTLSPPLPAYGSDFGALNPPAYSNAPAAPPTPKAAPGETPKGPRGGSLGGRPACDCPNCQELERLGGPAGARRKPVHSCHIPGCGKVYGKASHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELERHVRTHTREKKFTCLLCSKRFTRSDHLSKHQKTHADPGPPKPPPGAEQPPASPRPPPASPAKDGGSPEAGSLLEI
SIO_010081: SP7
subclass of: SO_0000673
so part of: SP7
location: 181424..182413
location: region:181424-182413:1
so has part: feature:181424-182413:1:exon

XP_031363111.1
type: Protein
SIO_000068: ncbiprotein

position:181424:1
position: 181424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181424-182413:1:exon

AAAS
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: AAAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 185489..193000
location: region:185489-193000:1
so has part: feature:185489-193000:1:exon
subclass of: SO_0000010

110480524
type: Gene
SIO_000068: ncbigene

position:185489:1
position: 185489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193000:1
position: 193000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185489-193000:1:exon

AAAS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: AAAS
product: aladin WD repeat nucleoporin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031507231.1
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: join(185489..185524,185721..185855,186950..187082,187937..187992,188106..188197,188472..188518,188903..189001,189254..189403,189562..189705,189798..189918,190076..190200,190375..190435,190960..191050,191415..191508,191622..191689,191785..191866,192428..192512,192767..193000)
location: region:185489-193000:1
so has part: feature:185489-185524:1:exon
so has part: feature:185721-185855:1:exon
so has part: feature:186950-187082:1:exon
so has part: feature:187937-187992:1:exon
so has part: feature:188106-188197:1:exon
so has part: feature:188472-188518:1:exon
so has part: feature:188903-189001:1:exon
so has part: feature:189254-189403:1:exon
so has part: feature:189562-189705:1:exon
so has part: feature:189798-189918:1:exon
so has part: feature:190076-190200:1:exon
so has part: feature:190375-190435:1:exon
so has part: feature:190960-191050:1:exon
so has part: feature:191415-191508:1:exon
so has part: feature:191622-191689:1:exon
so has part: feature:191785-191866:1:exon
so has part: feature:192428-192512:1:exon
so has part: feature:192767-193000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185489-185524:1:exon

position:185524:1
position: 185524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185721-185855:1:exon

position:185721:1
position: 185721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185855:1
position: 185855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:186950-187082:1:exon

position:186950:1
position: 186950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187082:1
position: 187082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:187937-187992:1:exon

position:187937:1
position: 187937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187992:1
position: 187992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:188106-188197:1:exon

position:188106:1
position: 188106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188197:1
position: 188197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:188472-188518:1:exon

position:188472:1
position: 188472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188518:1
position: 188518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:188903-189001:1:exon

position:188903:1
position: 188903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189001:1
position: 189001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:189254-189403:1:exon

position:189254:1
position: 189254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189403:1
position: 189403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:189562-189705:1:exon

position:189562:1
position: 189562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189705:1
position: 189705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:189798-189918:1:exon

position:189798:1
position: 189798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189918:1
position: 189918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:190076-190200:1:exon

position:190076:1
position: 190076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190200:1
position: 190200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:190375-190435:1:exon

position:190375:1
position: 190375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190435:1
position: 190435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:190960-191050:1:exon

position:190960:1
position: 190960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191050:1
position: 191050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:191415-191508:1:exon

position:191415:1
position: 191415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191508:1
position: 191508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:191622-191689:1:exon

position:191622:1
position: 191622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191689:1
position: 191689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:191785-191866:1:exon

position:191785:1
position: 191785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191866:1
position: 191866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:192428-192512:1:exon

position:192428:1
position: 192428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192512:1
position: 192512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:192767-193000:1:exon

position:192767:1
position: 192767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AAAS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: AAAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aladin
translation: MCSLGLFPPPPPPGDVTLYELNNALVCGRLSEQLPLPXXXQVPELPVLSLPKEPLKAHGRLEPSARPPFIHHRESLWKRCLSAWRDAGLCGLLRELAGAEEEGLRWLRTGSGHALAVCRWLSSLHGSLFPHLSLTSEDMIAAFSQAVDWASCTIRAFAWHPHTNKFAVALLDDSIRVYNSSRSPCSPRECQSLLRRRLSRLLLQPPQVSPGWDFWPARALSGPGTPRLSHTSATVPSLKHRLQRNVAAMAWKPLCASILAVACQSCVLVWHLDPTSLSTRPSSGCAQVLSCPGHGPVTSLAWAPSGERLLSASPVDTAMLVWDVSTETCVQLQWFGGGGVTYVAWSPDGSKVLAATPSAVFRVWEAQMWTCERWPTIRGRCQTGCWSPDGSRLLFTVLGESVIYSLSFSEYRGEMQGQVGGSKTASIVADLSETTFETLYGEERIGGEVHSMVWDPTGERLAVIIRGHPESVGSQPAVAVFRTRNSPVFELLPCGFVRGERGAWPQLISFHPCFPQGALLTVCWSSGRISHIPFFFVSALEPRGSPRRSPAPVLGSVREQPLFSEL
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: join(185738..185855,186950..187082,187937..187992,188106..188197,188472..188518,188903..189001,189254..189403,189562..189705,189798..189918,190076..190200,190375..190435,190960..191050,191415..191508,191622..191689,191785..191866,192428..192512,192767..192901)
location: region:185738-192901:1
so has part: feature:185738-185855:1:exon
so has part: feature:186950-187082:1:exon
so has part: feature:187937-187992:1:exon
so has part: feature:188106-188197:1:exon
so has part: feature:188472-188518:1:exon
so has part: feature:188903-189001:1:exon
so has part: feature:189254-189403:1:exon
so has part: feature:189562-189705:1:exon
so has part: feature:189798-189918:1:exon
so has part: feature:190076-190200:1:exon
so has part: feature:190375-190435:1:exon
so has part: feature:190960-191050:1:exon
so has part: feature:191415-191508:1:exon
so has part: feature:191622-191689:1:exon
so has part: feature:191785-191866:1:exon
so has part: feature:192428-192512:1:exon
so has part: feature:192767-192901:1:exon

XP_031363091.1
type: Protein
SIO_000068: ncbiprotein

position:185738:1
position: 185738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192901:1
position: 192901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185738-185855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186950-187082:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187937-187992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188106-188197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188472-188518:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188903-189001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189254-189403:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189562-189705:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:189798-189918:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190076-190200:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:190375-190435:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190960-191050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:191415-191508:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:191622-191689:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:191785-191866:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:192428-192512:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:192767-192901:1:exon

C29H12orf10
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: C29H12orf10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(193932..196329)
location: region:193932-196329:-1
so has part: feature:193932-196329:-1:exon
subclass of: SO_0000010

110480538
type: Gene
SIO_000068: ncbigene

position:193932:-1
position: 193932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196329:-1
position: 196329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193932-196329:-1:exon

C29H12orf10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: C29H12orf10
product: chromosome 29 C12orf10 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021548559.2
SIO_010081: C29H12orf10
subclass of: SO_0000673
so part of: C29H12orf10
location: complement(join(193932..194351,194428..194609,194829..194951,195176..195325,195513..195672,195739..195851,196132..196329))
location: region:193932-196329:-1
so has part: feature:196132-196329:-1:exon
so has part: feature:195739-195851:-1:exon
so has part: feature:195513-195672:-1:exon
so has part: feature:195176-195325:-1:exon
so has part: feature:194829-194951:-1:exon
so has part: feature:194428-194609:-1:exon
so has part: feature:193932-194351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196132-196329:-1:exon

position:196132:-1
position: 196132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195739-195851:-1:exon

position:195739:-1
position: 195739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195851:-1
position: 195851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:195513-195672:-1:exon

position:195513:-1
position: 195513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195672:-1
position: 195672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195176-195325:-1:exon

position:195176:-1
position: 195176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195325:-1
position: 195325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:194829-194951:-1:exon

position:194829:-1
position: 194829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194951:-1
position: 194951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:194428-194609:-1:exon

position:194428:-1
position: 194428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194609:-1
position: 194609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:193932-194351:-1:exon

position:194351:-1
position: 194351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C29H12orf10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: C29H12orf10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0160 protein MYG1, mitochondrial
translation: MRGAARAARLGAMAATGTGTGTGPATGTAHKRPHPEPAARIGTHDGTFHCDEALACFLLRLLPRYRDAEIVRTRDPQRLAGCDVVVDVGGEYDPGRHRYDHHQRSFAESMRSLRPDKPWSTKLSSAGLVYCHFGAQILAALLGQPEDGPVVTALYDKLYENFVEEIDAMDNGIAPAAGEPRYALSTTLSARVGHLNPRWNDPDQDTEAGFRRAMELVGSEFLERLDFYHRAWLPARALVEEAIRQRLEVDASGQVLELSQGGCPWKEHVFQLERELALPRPLQLVLFPDRGGQWRVQSVPTAPHSFQSRLPLPEAWRGLRDEALSELAGIPGCVFVHASGFIGGHRTREGALQMARRALELGAGTEST
SIO_010081: C29H12orf10
subclass of: SO_0000673
so part of: C29H12orf10
location: complement(join(194171..194351,194428..194609,194829..194951,195176..195325,195513..195672,195739..195851,196132..196329))
location: region:194171-196329:-1
so has part: feature:196132-196329:-1:exon
so has part: feature:195739-195851:-1:exon
so has part: feature:195513-195672:-1:exon
so has part: feature:195176-195325:-1:exon
so has part: feature:194829-194951:-1:exon
so has part: feature:194428-194609:-1:exon
so has part: feature:194171-194351:-1:exon

XP_021404234.2
type: Protein
SIO_000068: ncbiprotein

position:194171:-1
position: 194171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196132-196329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195739-195851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195513-195672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195176-195325:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194829-194951:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194428-194609:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:194171-194351:-1:exon

VDR
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(198515..207991)
location: region:198515-207991:-1
so has part: feature:198515-207991:-1:exon
subclass of: SO_0000010

110480531
type: Gene
SIO_000068: ncbigene

position:198515:-1
position: 198515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207991:-1
position: 207991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198515-207991:-1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: VDR
product: vitamin D receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021548550.2
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(198515..198802,199566..199682,200041..200192,200576..200747,201526..201649,201757..201941,204838..204968,207843..207991))
location: region:198515-207991:-1
so has part: feature:207843-207991:-1:exon
so has part: feature:204838-204968:-1:exon
so has part: feature:201757-201941:-1:exon
so has part: feature:201526-201649:-1:exon
so has part: feature:200576-200747:-1:exon
so has part: feature:200041-200192:-1:exon
so has part: feature:199566-199682:-1:exon
so has part: feature:198515-198802:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207843-207991:-1:exon

position:207843:-1
position: 207843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:204838-204968:-1:exon

position:204838:-1
position: 204838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204968:-1
position: 204968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:201757-201941:-1:exon

position:201757:-1
position: 201757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201941:-1
position: 201941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:201526-201649:-1:exon

position:201526:-1
position: 201526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201649:-1
position: 201649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:200576-200747:-1:exon

position:200576:-1
position: 200576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200747:-1
position: 200747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:200041-200192:-1:exon

position:200041:-1
position: 200041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200192:-1
position: 200192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:199566-199682:-1:exon

position:199566:-1
position: 199566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199682:-1
position: 199682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:198515-198802:-1:exon

position:198802:-1
position: 198802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor
translation: MDPGACSTSLADGAGDPERSVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFSGDCHITKDNRRHCQACRLKRCLDIGMMKEFILTDEEVQRKREMILKRKEEEALRESLKPKLSEEQQKVIDILLEAHRKTYDPTYADFTKFRPPVRSHPSSRGATKSSSLLTQDLSSEDSSDLFSSEAFSTFPEPAEPPPLPGLALQEEQDESSSVNLEFSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLSVEDQIVLLKCSAMEVIMLRSNESFTLEDMSWTCGSSDFKYRVSDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVREPLRVEALQERLSEVLQSYIRARHAAPGGRLLYAKMIQKLADLRSLNEEHSRQYRCLSFQPEHSMQLTPLLLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(198543..198802,199566..199682,200041..200192,200576..200747,201526..201649,201757..201941,204838..204968,207843..207991))
location: region:198543-207991:-1
so has part: feature:207843-207991:-1:exon
so has part: feature:204838-204968:-1:exon
so has part: feature:201757-201941:-1:exon
so has part: feature:201526-201649:-1:exon
so has part: feature:200576-200747:-1:exon
so has part: feature:200041-200192:-1:exon
so has part: feature:199566-199682:-1:exon
so has part: feature:198543-198802:-1:exon

XP_021404225.1
type: Protein
SIO_000068: ncbiprotein

position:198543:-1
position: 198543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207843-207991:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204838-204968:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201757-201941:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201526-201649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200576-200747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:200041-200192:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199566-199682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198543-198802:-1:exon

LOC116184549
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 210833..216837
location: region:210833-216837:1
so has part: feature:210833-216837:1:exon
subclass of: SO_0000011

116184549
type: Gene
SIO_000068: ncbigene

position:210833:1
position: 210833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216837:1
position: 216837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210833-216837:1:exon

LOC116184549
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184549
product: uncharacterized LOC116184549
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004149302.1
SIO_010081: LOC116184549
subclass of: SO_0000673
so part of: LOC116184549
location: join(210833..210976,211068..211202,216650..216837)
location: region:210833-216837:1
so has part: feature:210833-210976:1:exon
so has part: feature:211068-211202:1:exon
so has part: feature:216650-216837:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210833-210976:1:exon

position:210976:1
position: 210976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:211068-211202:1:exon

position:211068:1
position: 211068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211202:1
position: 211202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:216650-216837:1:exon

position:216650:1
position: 216650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM106C
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 217901..221144
location: region:217901-221144:1
so has part: feature:217901-221144:1:exon
subclass of: SO_0000010

110480530
type: Gene
SIO_000068: ncbigene

position:217901:1
position: 217901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221144:1
position: 221144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217901-221144:1:exon

TMEM106C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TMEM106C
product: transmembrane protein 106C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021548549.2
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(217901..217961,218879..219090,219187..219250,219593..219752,219834..219974,220088..220137,220385..220438,220783..221144)
location: region:217901-221144:1
so has part: feature:217901-217961:1:exon
so has part: feature:218879-219090:1:exon
so has part: feature:219187-219250:1:exon
so has part: feature:219593-219752:1:exon
so has part: feature:219834-219974:1:exon
so has part: feature:220088-220137:1:exon
so has part: feature:220385-220438:1:exon
so has part: feature:220783-221144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217901-217961:1:exon

position:217961:1
position: 217961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218879-219090:1:exon

position:218879:1
position: 218879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219090:1
position: 219090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:219187-219250:1:exon

position:219187:1
position: 219187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219250:1
position: 219250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:219593-219752:1:exon

position:219593:1
position: 219593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219752:1
position: 219752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:219834-219974:1:exon

position:219834:1
position: 219834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219974:1
position: 219974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:220088-220137:1:exon

position:220088:1
position: 220088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220137:1
position: 220137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:220385-220438:1:exon

position:220385:1
position: 220385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220438:1
position: 220438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:220783-221144:1:exon

position:220783:1
position: 220783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM106C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C
translation: MGSVRSLPSSSAAPSRRKAEHEEDEDVLVGQEPVEDVAKIPYMEFTGRDSITCPTCQGIGCIPTEQVNELVALIPYSDQRLRPQRTKFYVLLSVLLCLLLSGLGVFFLFPHSVLVDDGGIKVVQVWFDRKNSAVLLAITATLRIRNSNFYSVSVSSLSSQVQYMNTVVGSQQLTNVSSIQPLRDKLVNFTVKAELGGSLSYVYFFCTLPKVKVHNIVILMRTSVKLSYIGRSAQSSLETFHYLDCSSNSTAPLPAAARAAP
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(218898..219090,219187..219250,219593..219752,219834..219974,220088..220137,220385..220438,220783..220906)
location: region:218898-220906:1
so has part: feature:218898-219090:1:exon
so has part: feature:219187-219250:1:exon
so has part: feature:219593-219752:1:exon
so has part: feature:219834-219974:1:exon
so has part: feature:220088-220137:1:exon
so has part: feature:220385-220438:1:exon
so has part: feature:220783-220906:1:exon

XP_021404224.1
type: Protein
SIO_000068: ncbiprotein

position:218898:1
position: 218898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220906:1
position: 220906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218898-219090:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219187-219250:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:219593-219752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219834-219974:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:220088-220137:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:220385-220438:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:220783-220906:1:exon

COL2A1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: COL2A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(223953..>242669)
location: region:223953-242669:-1
so has part: feature:223953-242669:-1:exon
subclass of: SO_0000010

110480541
type: Gene
SIO_000068: ncbigene

position:223953:-1
position: 223953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242669:-1
position: 242669
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223953-242669:-1:exon

COL2A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: COL2A1
product: collagen type II alpha 1 chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 65 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021548562.1
SIO_010081: COL2A1
subclass of: SO_0000673
so part of: COL2A1
location: complement(join(223953..224099,224864..225106,225685..225872,226147..226435,226583..226690,226810..226863,227285..227392,227499..227552,227865..227972,228083..228136,228294..228401,229335..229442,229522..229683,230076..230129,230219..230272,230391..230498,230569..230622,230705..230758,231301..231354,231633..231686,231775..231882,231962..232060,232342..232386,232477..232530,232644..232697,232903..232956,233105..233158,233241..233339,233552..233605,234231..234329,234416..234469,234634..234741,235524..235577,236025..236123,236693..236737,236887..236985,237066..237119,237238..237282,237371..237424,237522..237566,237706..237759,237863..237916,237999..238052,238169..238222,238311..238364,238447..238491,238743..238820,239178..239279,239393..239446,239575..239607,239731..239763,239970..239986,240644..240844,242618..>242669))
location: region:223953-242669:-1
so has part: feature:242618-242669:-1:exon
so has part: feature:240644-240844:-1:exon
so has part: feature:239970-239986:-1:exon
so has part: feature:239731-239763:-1:exon
so has part: feature:239575-239607:-1:exon
so has part: feature:239393-239446:-1:exon
so has part: feature:239178-239279:-1:exon
so has part: feature:238743-238820:-1:exon
so has part: feature:238447-238491:-1:exon
so has part: feature:238311-238364:-1:exon
so has part: feature:238169-238222:-1:exon
so has part: feature:237999-238052:-1:exon
so has part: feature:237863-237916:-1:exon
so has part: feature:237706-237759:-1:exon
so has part: feature:237522-237566:-1:exon
so has part: feature:237371-237424:-1:exon
so has part: feature:237238-237282:-1:exon
so has part: feature:237066-237119:-1:exon
so has part: feature:236887-236985:-1:exon
so has part: feature:236693-236737:-1:exon
so has part: feature:236025-236123:-1:exon
so has part: feature:235524-235577:-1:exon
so has part: feature:234634-234741:-1:exon
so has part: feature:234416-234469:-1:exon
so has part: feature:234231-234329:-1:exon
so has part: feature:233552-233605:-1:exon
so has part: feature:233241-233339:-1:exon
so has part: feature:233105-233158:-1:exon
so has part: feature:232903-232956:-1:exon
so has part: feature:232644-232697:-1:exon
so has part: feature:232477-232530:-1:exon
so has part: feature:232342-232386:-1:exon
so has part: feature:231962-232060:-1:exon
so has part: feature:231775-231882:-1:exon
so has part: feature:231633-231686:-1:exon
so has part: feature:231301-231354:-1:exon
so has part: feature:230705-230758:-1:exon
so has part: feature:230569-230622:-1:exon
so has part: feature:230391-230498:-1:exon
so has part: feature:230219-230272:-1:exon
so has part: feature:230076-230129:-1:exon
so has part: feature:229522-229683:-1:exon
so has part: feature:229335-229442:-1:exon
so has part: feature:228294-228401:-1:exon
so has part: feature:228083-228136:-1:exon
so has part: feature:227865-227972:-1:exon
so has part: feature:227499-227552:-1:exon
so has part: feature:227285-227392:-1:exon
so has part: feature:226810-226863:-1:exon
so has part: feature:226583-226690:-1:exon
so has part: feature:226147-226435:-1:exon
so has part: feature:225685-225872:-1:exon
so has part: feature:224864-225106:-1:exon
so has part: feature:223953-224099:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242618-242669:-1:exon

position:242618:-1
position: 242618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240644-240844:-1:exon

position:240644:-1
position: 240644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240844:-1
position: 240844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:239970-239986:-1:exon

position:239970:-1
position: 239970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239986:-1
position: 239986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:239731-239763:-1:exon

position:239731:-1
position: 239731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239763:-1
position: 239763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:239575-239607:-1:exon

position:239575:-1
position: 239575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239607:-1
position: 239607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:239393-239446:-1:exon

position:239393:-1
position: 239393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239446:-1
position: 239446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:239178-239279:-1:exon

position:239178:-1
position: 239178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239279:-1
position: 239279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:238743-238820:-1:exon

position:238743:-1
position: 238743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238820:-1
position: 238820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:238447-238491:-1:exon

position:238447:-1
position: 238447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238491:-1
position: 238491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:238311-238364:-1:exon

position:238311:-1
position: 238311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238364:-1
position: 238364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:238169-238222:-1:exon

position:238169:-1
position: 238169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238222:-1
position: 238222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:237999-238052:-1:exon

position:237999:-1
position: 237999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238052:-1
position: 238052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:237863-237916:-1:exon

position:237863:-1
position: 237863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237916:-1
position: 237916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:237706-237759:-1:exon

position:237706:-1
position: 237706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237759:-1
position: 237759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:237522-237566:-1:exon

position:237522:-1
position: 237522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237566:-1
position: 237566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:237371-237424:-1:exon

position:237371:-1
position: 237371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237424:-1
position: 237424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:237238-237282:-1:exon

position:237238:-1
position: 237238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237282:-1
position: 237282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:237066-237119:-1:exon

position:237066:-1
position: 237066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237119:-1
position: 237119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:236887-236985:-1:exon

position:236887:-1
position: 236887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236985:-1
position: 236985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:236693-236737:-1:exon

position:236693:-1
position: 236693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236737:-1
position: 236737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:236025-236123:-1:exon

position:236025:-1
position: 236025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236123:-1
position: 236123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:235524-235577:-1:exon

position:235524:-1
position: 235524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235577:-1
position: 235577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:234634-234741:-1:exon

position:234634:-1
position: 234634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234741:-1
position: 234741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:234416-234469:-1:exon

position:234416:-1
position: 234416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234469:-1
position: 234469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:234231-234329:-1:exon

position:234231:-1
position: 234231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234329:-1
position: 234329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:233552-233605:-1:exon

position:233552:-1
position: 233552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233605:-1
position: 233605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:233241-233339:-1:exon

position:233241:-1
position: 233241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233339:-1
position: 233339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:233105-233158:-1:exon

position:233105:-1
position: 233105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233158:-1
position: 233158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:232903-232956:-1:exon

position:232903:-1
position: 232903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232956:-1
position: 232956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:232644-232697:-1:exon

position:232644:-1
position: 232644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232697:-1
position: 232697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:232477-232530:-1:exon

position:232477:-1
position: 232477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232530:-1
position: 232530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:232342-232386:-1:exon

position:232342:-1
position: 232342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232386:-1
position: 232386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:231962-232060:-1:exon

position:231962:-1
position: 231962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232060:-1
position: 232060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:231775-231882:-1:exon

position:231775:-1
position: 231775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231882:-1
position: 231882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:231633-231686:-1:exon

position:231633:-1
position: 231633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231686:-1
position: 231686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:231301-231354:-1:exon

position:231301:-1
position: 231301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231354:-1
position: 231354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:230705-230758:-1:exon

position:230705:-1
position: 230705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230758:-1
position: 230758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:230569-230622:-1:exon

position:230569:-1
position: 230569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230622:-1
position: 230622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:230391-230498:-1:exon

position:230391:-1
position: 230391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230498:-1
position: 230498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:230219-230272:-1:exon

position:230219:-1
position: 230219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230272:-1
position: 230272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:230076-230129:-1:exon

position:230076:-1
position: 230076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230129:-1
position: 230129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:229522-229683:-1:exon

position:229522:-1
position: 229522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229683:-1
position: 229683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:229335-229442:-1:exon

position:229335:-1
position: 229335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229442:-1
position: 229442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:228294-228401:-1:exon

position:228294:-1
position: 228294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228401:-1
position: 228401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:228083-228136:-1:exon

position:228083:-1
position: 228083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228136:-1
position: 228136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:227865-227972:-1:exon

position:227865:-1
position: 227865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227972:-1
position: 227972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:227499-227552:-1:exon

position:227499:-1
position: 227499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227552:-1
position: 227552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:227285-227392:-1:exon

position:227285:-1
position: 227285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227392:-1
position: 227392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:226810-226863:-1:exon

position:226810:-1
position: 226810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226863:-1
position: 226863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:226583-226690:-1:exon

position:226583:-1
position: 226583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226690:-1
position: 226690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:226147-226435:-1:exon

position:226147:-1
position: 226147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226435:-1
position: 226435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:225685-225872:-1:exon

position:225685:-1
position: 225685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225872:-1
position: 225872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:224864-225106:-1:exon

position:224864:-1
position: 224864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225106:-1
position: 225106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:223953-224099:-1:exon

position:224099:-1
position: 224099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COL2A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: COL2A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(II) chain
translation: LLLLCLAAAAAAQDRDLPEAGSCLQDGHRYSDKDVWKPEPCRICVCDTGTVLCDEIMCEELRDCPSPEIPFGECCPICPTEQPSGQPGPKGQKGEPGDIKDVVGPRGPPGPQGPAGEQGQRGDRGEKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGSPGPQGFQGNPGEPGEPGAAGPMGPRGPPGPPGKPGDDGETGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGAKGESGSPGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAPGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAGPKGATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGSPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGESGKPGDQGVPGEAGTPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGADGQPGAKGEQGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPPGPPGSAGKDGPKGARGDAGPPGRAGDPGLQGPAGPPGEKGEPGEDGPAGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPPGLTGPAGEPGREGNPGSDGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPTGKQGDRGETGAQGPMGPSGPAGARGMPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPGNPGPPGPPGPPGTGIDMSAFAGLGQPEKGPDPGRYMRADEAAPGLRPHDAEVDATLKALNNQIESIRSPEGSRKNPARTCRDIKLCHPDWKSGDYWIDPNQGCTLDAIKVFCNMATGETCVYPSPGSIPRKNWWSSKAKEKKHVWFAETINGGFHFSYGAEDLAPNTANIQMTFLRLLSTEGSQNITYHCRNSVAYLDEESGSLRKALLIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTGKWGRTVIEYRSQKTSRLPIVDIAPMDIGGPEQEFGVDLGPVCFL
SIO_010081: COL2A1
subclass of: SO_0000673
so part of: COL2A1
location: complement(join(223953..224099,224864..225106,225685..225872,226147..226435,226583..226690,226810..226863,227285..227392,227499..227552,227865..227972,228083..228136,228294..228401,229335..229442,229522..229683,230076..230129,230219..230272,230391..230498,230569..230622,230705..230758,231301..231354,231633..231686,231775..231882,231962..232060,232342..232386,232477..232530,232644..232697,232903..232956,233105..233158,233241..233339,233552..233605,234231..234329,234416..234469,234634..234741,235524..235577,236025..236123,236693..236737,236887..236985,237066..237119,237238..237282,237371..237424,237522..237566,237706..237759,237863..237916,237999..238052,238169..238222,238311..238364,238447..238491,238743..238820,239178..239279,239393..239446,239575..239607,239731..239763,239970..239986,240644..240844,242618..>242669))
location: region:223953-242669:-1
so has part: feature:242618-242669:-1:exon
so has part: feature:240644-240844:-1:exon
so has part: feature:239970-239986:-1:exon
so has part: feature:239731-239763:-1:exon
so has part: feature:239575-239607:-1:exon
so has part: feature:239393-239446:-1:exon
so has part: feature:239178-239279:-1:exon
so has part: feature:238743-238820:-1:exon
so has part: feature:238447-238491:-1:exon
so has part: feature:238311-238364:-1:exon
so has part: feature:238169-238222:-1:exon
so has part: feature:237999-238052:-1:exon
so has part: feature:237863-237916:-1:exon
so has part: feature:237706-237759:-1:exon
so has part: feature:237522-237566:-1:exon
so has part: feature:237371-237424:-1:exon
so has part: feature:237238-237282:-1:exon
so has part: feature:237066-237119:-1:exon
so has part: feature:236887-236985:-1:exon
so has part: feature:236693-236737:-1:exon
so has part: feature:236025-236123:-1:exon
so has part: feature:235524-235577:-1:exon
so has part: feature:234634-234741:-1:exon
so has part: feature:234416-234469:-1:exon
so has part: feature:234231-234329:-1:exon
so has part: feature:233552-233605:-1:exon
so has part: feature:233241-233339:-1:exon
so has part: feature:233105-233158:-1:exon
so has part: feature:232903-232956:-1:exon
so has part: feature:232644-232697:-1:exon
so has part: feature:232477-232530:-1:exon
so has part: feature:232342-232386:-1:exon
so has part: feature:231962-232060:-1:exon
so has part: feature:231775-231882:-1:exon
so has part: feature:231633-231686:-1:exon
so has part: feature:231301-231354:-1:exon
so has part: feature:230705-230758:-1:exon
so has part: feature:230569-230622:-1:exon
so has part: feature:230391-230498:-1:exon
so has part: feature:230219-230272:-1:exon
so has part: feature:230076-230129:-1:exon
so has part: feature:229522-229683:-1:exon
so has part: feature:229335-229442:-1:exon
so has part: feature:228294-228401:-1:exon
so has part: feature:228083-228136:-1:exon
so has part: feature:227865-227972:-1:exon
so has part: feature:227499-227552:-1:exon
so has part: feature:227285-227392:-1:exon
so has part: feature:226810-226863:-1:exon
so has part: feature:226583-226690:-1:exon
so has part: feature:226147-226435:-1:exon
so has part: feature:225685-225872:-1:exon
so has part: feature:224864-225106:-1:exon
so has part: feature:223953-224099:-1:exon

XP_021404237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242618-242669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240644-240844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239970-239986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239731-239763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239575-239607:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:239393-239446:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:239178-239279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:238743-238820:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:238447-238491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:238311-238364:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:238169-238222:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:237999-238052:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:237863-237916:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:237706-237759:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:237522-237566:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:237371-237424:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:237238-237282:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:237066-237119:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:236887-236985:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:236693-236737:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:236025-236123:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:235524-235577:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:234634-234741:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:234416-234469:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:234231-234329:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:233552-233605:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:233241-233339:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:233105-233158:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:232903-232956:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:232644-232697:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:232477-232530:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:232342-232386:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:231962-232060:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:231775-231882:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:231633-231686:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:231301-231354:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:230705-230758:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:230569-230622:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:230391-230498:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:230219-230272:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:230076-230129:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:229522-229683:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:229335-229442:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:228294-228401:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:228083-228136:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:227865-227972:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:227499-227552:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:227285-227392:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:226810-226863:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:226583-226690:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:226147-226435:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:225685-225872:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:224864-225106:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:223953-224099:-1:exon

SENP1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SENP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(250015..257443)
location: region:250015-257443:-1
so has part: feature:250015-257443:-1:exon
subclass of: SO_0000010

110480529
type: Gene
SIO_000068: ncbigene

position:250015:-1
position: 250015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257443:-1
position: 257443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250015-257443:-1:exon

SENP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SENP1
product: SUMO specific peptidase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021548548.2
SIO_010081: SENP1
subclass of: SO_0000673
so part of: SENP1
location: complement(join(250015..250220,250820..250915,251217..251301,251685..251764,252496..252699,253154..253285,253737..253889,254230..254314,254423..254461,254597..254651,254972..255207,255450..255553,255840..255975,256438..256534,256645..256717,257354..257443))
location: region:250015-257443:-1
so has part: feature:257354-257443:-1:exon
so has part: feature:256645-256717:-1:exon
so has part: feature:256438-256534:-1:exon
so has part: feature:255840-255975:-1:exon
so has part: feature:255450-255553:-1:exon
so has part: feature:254972-255207:-1:exon
so has part: feature:254597-254651:-1:exon
so has part: feature:254423-254461:-1:exon
so has part: feature:254230-254314:-1:exon
so has part: feature:253737-253889:-1:exon
so has part: feature:253154-253285:-1:exon
so has part: feature:252496-252699:-1:exon
so has part: feature:251685-251764:-1:exon
so has part: feature:251217-251301:-1:exon
so has part: feature:250820-250915:-1:exon
so has part: feature:250015-250220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257354-257443:-1:exon

position:257354:-1
position: 257354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:256645-256717:-1:exon

position:256645:-1
position: 256645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256717:-1
position: 256717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:256438-256534:-1:exon

position:256438:-1
position: 256438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256534:-1
position: 256534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:255840-255975:-1:exon

position:255840:-1
position: 255840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255975:-1
position: 255975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:255450-255553:-1:exon

position:255450:-1
position: 255450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255553:-1
position: 255553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:254972-255207:-1:exon

position:254972:-1
position: 254972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255207:-1
position: 255207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:254597-254651:-1:exon

position:254597:-1
position: 254597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254651:-1
position: 254651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:254423-254461:-1:exon

position:254423:-1
position: 254423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254461:-1
position: 254461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:254230-254314:-1:exon

position:254230:-1
position: 254230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254314:-1
position: 254314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:253737-253889:-1:exon

position:253737:-1
position: 253737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253889:-1
position: 253889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:253154-253285:-1:exon

position:253154:-1
position: 253154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253285:-1
position: 253285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:252496-252699:-1:exon

position:252496:-1
position: 252496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252699:-1
position: 252699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:251685-251764:-1:exon

position:251685:-1
position: 251685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251764:-1
position: 251764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:251217-251301:-1:exon

position:251217:-1
position: 251217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251301:-1
position: 251301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:250820-250915:-1:exon

position:250820:-1
position: 250820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250915:-1
position: 250915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:250015-250220:-1:exon

position:250220:-1
position: 250220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SENP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SENP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 1
translation: MRMEAREAARARPSPAFKGFGADSKFCLPKLSSFSCPAGNSSCSLSYAPEIPERFPGANGQWRSSKPRGSRGSFLDTRKNSSGNSSTFGGKSSLHGASFPLKPAPSPSWSRRSPKKAPRRFLSTAEETVREEEREIYRQLLQMVTGKRFSSCKPAPLLPFHLSRCPRSGPSLPQEAPRDDPEALEIHKIPGPVPHSPEPPQNSQNPPLGPSPGFPGGFQPRNSTVPQQREEEPGAEAQSKGSDSVILLKVKDSRTPAPSIPFFQAELWIKELTSVYDSRARERWRQIEEQKALALQLQSQRLQERERSGQDLVDLHLRVPLEKEIPVAVGPEGPERARPGQPDEEFPEITEEMEKEIKSLFRGGNQDEVLSEAFRLTITRKDIQTLNNLNWLNDEIINFYMNLLMERSKDKDLPTVHAFNTFFFTKLKTAGYQAVKRWTKKVDIFSVDLLLVPIHLGVHWCLAVVDFRKKTITYYDSMGGINSEACRILLQYLKQESLDKKRKEFDTNGWALLSKKSQEIPQQMNGSDCGMFACRYAECISKDKPINFTQQHMPYFRKRMAWEILHRKLL
SIO_010081: SENP1
subclass of: SO_0000673
so part of: SENP1
location: complement(join(250158..250220,250820..250915,251217..251301,251685..251764,252496..252699,253154..253285,253737..253889,254230..254314,254423..254461,254597..254651,254972..255207,255450..255553,255840..255975,256438..256534,256645..256717,257354..257428))
location: region:250158-257428:-1
so has part: feature:257354-257428:-1:exon
so has part: feature:256645-256717:-1:exon
so has part: feature:256438-256534:-1:exon
so has part: feature:255840-255975:-1:exon
so has part: feature:255450-255553:-1:exon
so has part: feature:254972-255207:-1:exon
so has part: feature:254597-254651:-1:exon
so has part: feature:254423-254461:-1:exon
so has part: feature:254230-254314:-1:exon
so has part: feature:253737-253889:-1:exon
so has part: feature:253154-253285:-1:exon
so has part: feature:252496-252699:-1:exon
so has part: feature:251685-251764:-1:exon
so has part: feature:251217-251301:-1:exon
so has part: feature:250820-250915:-1:exon
so has part: feature:250158-250220:-1:exon

XP_021404223.1
type: Protein
SIO_000068: ncbiprotein

position:250158:-1
position: 250158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257428:-1
position: 257428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257354-257428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:256645-256717:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256438-256534:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255840-255975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255450-255553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254972-255207:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:254597-254651:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254423-254461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:254230-254314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253737-253889:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:253154-253285:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:252496-252699:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:251685-251764:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:251217-251301:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:250820-250915:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:250158-250220:-1:exon

PFKM
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PFKM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 260291..268413
location: region:260291-268413:1
so has part: feature:260291-268413:1:exon
subclass of: SO_0000010

110480527
type: Gene
SIO_000068: ncbigene

position:260291:1
position: 260291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268413:1
position: 268413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260291-268413:1:exon

PFKM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PFKM
product: phosphofructokinase, muscle
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021548546.2
SIO_010081: PFKM
subclass of: SO_0000673
so part of: PFKM
location: join(260291..260525,261272..261345,261441..261518,261819..262008,262620..262785,262864..262908,262996..263104,263265..263360,263450..263542,263636..263761,264084..264148,264232..264295,264505..264651,265376..265446,265535..265622,265825..265977,266599..266763,266863..266924,267126..267237,267358..267457,267846..267951,268054..268413)
location: region:260291-268413:1
so has part: feature:260291-260525:1:exon
so has part: feature:261272-261345:1:exon
so has part: feature:261441-261518:1:exon
so has part: feature:261819-262008:1:exon
so has part: feature:262620-262785:1:exon
so has part: feature:262864-262908:1:exon
so has part: feature:262996-263104:1:exon
so has part: feature:263265-263360:1:exon
so has part: feature:263450-263542:1:exon
so has part: feature:263636-263761:1:exon
so has part: feature:264084-264148:1:exon
so has part: feature:264232-264295:1:exon
so has part: feature:264505-264651:1:exon
so has part: feature:265376-265446:1:exon
so has part: feature:265535-265622:1:exon
so has part: feature:265825-265977:1:exon
so has part: feature:266599-266763:1:exon
so has part: feature:266863-266924:1:exon
so has part: feature:267126-267237:1:exon
so has part: feature:267358-267457:1:exon
so has part: feature:267846-267951:1:exon
so has part: feature:268054-268413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:260291-260525:1:exon

position:260525:1
position: 260525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:261272-261345:1:exon

position:261272:1
position: 261272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261345:1
position: 261345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:261441-261518:1:exon

position:261441:1
position: 261441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261518:1
position: 261518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:261819-262008:1:exon

position:261819:1
position: 261819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262008:1
position: 262008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:262620-262785:1:exon

position:262620:1
position: 262620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262785:1
position: 262785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:262864-262908:1:exon

position:262864:1
position: 262864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262908:1
position: 262908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:262996-263104:1:exon

position:262996:1
position: 262996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263104:1
position: 263104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:263265-263360:1:exon

position:263265:1
position: 263265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263360:1
position: 263360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:263450-263542:1:exon

position:263450:1
position: 263450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263542:1
position: 263542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:263636-263761:1:exon

position:263636:1
position: 263636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263761:1
position: 263761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:264084-264148:1:exon

position:264084:1
position: 264084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264148:1
position: 264148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:264232-264295:1:exon

position:264232:1
position: 264232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264295:1
position: 264295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:264505-264651:1:exon

position:264505:1
position: 264505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264651:1
position: 264651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:265376-265446:1:exon

position:265376:1
position: 265376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265446:1
position: 265446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:265535-265622:1:exon

position:265535:1
position: 265535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265622:1
position: 265622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:265825-265977:1:exon

position:265825:1
position: 265825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265977:1
position: 265977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:266599-266763:1:exon

position:266599:1
position: 266599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266763:1
position: 266763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:266863-266924:1:exon

position:266863:1
position: 266863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266924:1
position: 266924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:267126-267237:1:exon

position:267126:1
position: 267126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267237:1
position: 267237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:267358-267457:1:exon

position:267358:1
position: 267358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267457:1
position: 267457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:267846-267951:1:exon

position:267846:1
position: 267846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267951:1
position: 267951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:268054-268413:1:exon

position:268054:1
position: 268054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PFKM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PFKM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent 6-phosphofructokinase, muscle type
translation: MPPSPAGPQHAETLGVGKAIAVLTSGGDAQGMNAAVRAVVRVGIYTGARVFFVCEGYQGLVDGGDHIREATWESVSMMLQLGGTVIGSARCQDFRAREGRLRAARNLVKRGITNLCVIGGDGSLTGADTFRAEWGGLLAELLKTGGITAEEAQRSSHLNIVGMVGSIDNDFCGTDMTIGTDSALHRIIEIVDAITTTAQSHQRTFVLEVMGRHCGYLALITALACGADWVFIPESPPEDDWEEHLCRRLAETRDGGSRLNIIIVAEGAIDKHGKAITSDDIKSLVVKRLGYDTRVTILGHVQRGGTPSAFDRILASRMGVEAVMALLEGTPDTPACVVSLSGNQAVRLPLMECVQVTKDVTTAMNEGRFEDAVKLRGRSFQNNWNVYKLLAHIRPPATKSGYTVAVMNVGAPAAGMNAAVRATVRIGLIHGHRMLAVHDGFEGLAFGMVEEIGWNTVGSWTGLGGSKLGTKRTLPKKYFEEISANISKFGIHGLVIIGGFEAFTGGLEMVEGRARFEELCIPLCIVPATVSNNVPGSDFSIGADTALNTITTTCDLIKQSAAGTKRRVFIIETMGGFCGYLATMAGLAAGADAAYIFEEPFSSRDLQANVDHLTEKMKTTVKRGLVLRNERCNENYTTDFIYNLYSEEGKGVFDCRKNVLGHMQQGGSPTPFDRNFGTKMGAKAVAWITGKIKECSRHGRIFANTADSACLLGMRKRSLVFQPIAELRQQTDFEHRIPKEQWWLRLRPILKILAKYNIELDTSETAHLEHLTRKVLVPEATL
SIO_010081: PFKM
subclass of: SO_0000673
so part of: PFKM
location: join(260435..260525,261272..261345,261441..261518,261819..262008,262620..262785,262864..262908,262996..263104,263265..263360,263450..263542,263636..263761,264084..264148,264232..264295,264505..264651,265376..265446,265535..265622,265825..265977,266599..266763,266863..266924,267126..267237,267358..267457,267846..267951,268054..268201)
location: region:260435-268201:1
so has part: feature:260435-260525:1:exon
so has part: feature:261272-261345:1:exon
so has part: feature:261441-261518:1:exon
so has part: feature:261819-262008:1:exon
so has part: feature:262620-262785:1:exon
so has part: feature:262864-262908:1:exon
so has part: feature:262996-263104:1:exon
so has part: feature:263265-263360:1:exon
so has part: feature:263450-263542:1:exon
so has part: feature:263636-263761:1:exon
so has part: feature:264084-264148:1:exon
so has part: feature:264232-264295:1:exon
so has part: feature:264505-264651:1:exon
so has part: feature:265376-265446:1:exon
so has part: feature:265535-265622:1:exon
so has part: feature:265825-265977:1:exon
so has part: feature:266599-266763:1:exon
so has part: feature:266863-266924:1:exon
so has part: feature:267126-267237:1:exon
so has part: feature:267358-267457:1:exon
so has part: feature:267846-267951:1:exon
so has part: feature:268054-268201:1:exon

XP_021404221.1
type: Protein
SIO_000068: ncbiprotein

position:260435:1
position: 260435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268201:1
position: 268201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260435-260525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:261272-261345:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261441-261518:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:261819-262008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262620-262785:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262864-262908:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262996-263104:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263265-263360:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263450-263542:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:263636-263761:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264084-264148:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264232-264295:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:264505-264651:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:265376-265446:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:265535-265622:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:265825-265977:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:266599-266763:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266863-266924:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:267126-267237:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:267358-267457:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:267846-267951:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:268054-268201:1:exon

ASB8
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ASB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(268847..271969)
location: region:268847-271969:-1
so has part: feature:268847-271969:-1:exon
subclass of: SO_0000010

110480526
type: Gene
SIO_000068: ncbigene

position:268847:-1
position: 268847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271969:-1
position: 271969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268847-271969:-1:exon

ASB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ASB8
product: ankyrin repeat and SOCS box containing 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021548544.2
SIO_010081: ASB8
subclass of: SO_0000673
so part of: ASB8
location: complement(join(268847..269926,270588..270692,271639..271969))
location: region:268847-271969:-1
so has part: feature:271639-271969:-1:exon
so has part: feature:270588-270692:-1:exon
so has part: feature:268847-269926:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271639-271969:-1:exon

position:271639:-1
position: 271639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:270588-270692:-1:exon

position:270588:-1
position: 270588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270692:-1
position: 270692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268847-269926:-1:exon

position:269926:-1
position: 269926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ASB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 8
translation: MWYIMQSIQSKYSLSERLIRTIAAIRSFPRDNVEDLIGRGADVNCLHGTLKPLHCACMVADADCVELLLQKGAEVNALDGYNRTALHYAAEKDETCVEILLEYGANPNALDGNKDTPLHWAAFKNNAECVRALLANGALVNALDYNNDTPLSWAAMKGNLESVSVLLDFGAEVRVVNLKGQSPISRLVALLVRGLGTEREDSCLDLLHRATGHFELRKNGSLPWEVARDPQLCQRLTLLCSAPGTLQALSRYAVRRSLGLRFLPQAVQQLPLPACLKEYLLLLT
SIO_010081: ASB8
subclass of: SO_0000673
so part of: ASB8
location: complement(join(269294..269926,270588..270692,271639..271755))
location: region:269294-271755:-1
so has part: feature:271639-271755:-1:exon
so has part: feature:270588-270692:-1:exon
so has part: feature:269294-269926:-1:exon

XP_021404219.1
type: Protein
SIO_000068: ncbiprotein

position:269294:-1
position: 269294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271755:-1
position: 271755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271639-271755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270588-270692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269294-269926:-1:exon

RNF212B
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: RNF212B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(272320..276804)
location: region:272320-276804:-1
so has part: feature:272320-276804:-1:exon
subclass of: SO_0000010

110480528
type: Gene
SIO_000068: ncbigene

position:272320:-1
position: 272320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276804:-1
position: 276804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272320-276804:-1:exon

RNF212B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RNF212B
product: ring finger protein 212B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031507239.1
SIO_010081: RNF212B
subclass of: SO_0000673
so part of: RNF212B
location: complement(join(272320..272505,272964..272995,273316..273364,273437..273488,273576..273618,273724..273787,273923..273971,274258..274373,274461..274535,274637..274689,275072..275220,275660..275719,276790..276804))
location: region:272320-276804:-1
so has part: feature:276790-276804:-1:exon
so has part: feature:275660-275719:-1:exon
so has part: feature:275072-275220:-1:exon
so has part: feature:274637-274689:-1:exon
so has part: feature:274461-274535:-1:exon
so has part: feature:274258-274373:-1:exon
so has part: feature:273923-273971:-1:exon
so has part: feature:273724-273787:-1:exon
so has part: feature:273576-273618:-1:exon
so has part: feature:273437-273488:-1:exon
so has part: feature:273316-273364:-1:exon
so has part: feature:272964-272995:-1:exon
so has part: feature:272320-272505:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:276790-276804:-1:exon

position:276790:-1
position: 276790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:275660-275719:-1:exon

position:275660:-1
position: 275660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275719:-1
position: 275719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:275072-275220:-1:exon

position:275072:-1
position: 275072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275220:-1
position: 275220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:274637-274689:-1:exon

position:274637:-1
position: 274637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274689:-1
position: 274689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:274461-274535:-1:exon

position:274461:-1
position: 274461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274535:-1
position: 274535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:274258-274373:-1:exon

position:274258:-1
position: 274258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274373:-1
position: 274373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:273923-273971:-1:exon

position:273923:-1
position: 273923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273971:-1
position: 273971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:273724-273787:-1:exon

position:273724:-1
position: 273724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273787:-1
position: 273787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:273576-273618:-1:exon

position:273576:-1
position: 273576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273618:-1
position: 273618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:273437-273488:-1:exon

position:273437:-1
position: 273437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273488:-1
position: 273488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:273316-273364:-1:exon

position:273316:-1
position: 273316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273364:-1
position: 273364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:272964-272995:-1:exon

position:272964:-1
position: 272964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272995:-1
position: 272995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:272320-272505:-1:exon

position:272505:-1
position: 272505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF212B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RNF212B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 212B
translation: MDWFHCSRCFRQDGTQFAITNCSHILCEGCGSTGPCPVCGTACRYLPVSEQMRPQDKVFFKNPVATALKHLAHITQVWRFQTAQAQILLDLHQDKARRAQAEMEKAREELRERTRELESLRRENEELRRMQLSPAWLWSSRSSTPRPSPTQSVTPQPRRQLSSQVVSRLAPLEPPQSRSTLGWQVGIAYRNSGTPLASGMVTPLAGTSEGQGSALRLARGGRSQWDLNPRP
SIO_010081: RNF212B
subclass of: SO_0000673
so part of: RNF212B
location: complement(join(272443..272505,272964..272995,273316..273364,273437..273488,273576..273618,273724..273787,273923..273971,274258..274373,274461..274535,274637..274689,275072..275171))
location: region:272443-275171:-1
so has part: feature:275072-275171:-1:exon
so has part: feature:274637-274689:-1:exon
so has part: feature:274461-274535:-1:exon
so has part: feature:274258-274373:-1:exon
so has part: feature:273923-273971:-1:exon
so has part: feature:273724-273787:-1:exon
so has part: feature:273576-273618:-1:exon
so has part: feature:273437-273488:-1:exon
so has part: feature:273316-273364:-1:exon
so has part: feature:272964-272995:-1:exon
so has part: feature:272443-272505:-1:exon

XP_031363099.1
type: Protein
SIO_000068: ncbiprotein

position:272443:-1
position: 272443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275171:-1
position: 275171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275072-275171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274637-274689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274461-274535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274258-274373:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273923-273971:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:273724-273787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:273576-273618:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:273437-273488:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273316-273364:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:272964-272995:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272443-272505:-1:exon

LOC110480540
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110480540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 275758..280846
location: region:275758-280846:1
so has part: feature:275758-280846:1:exon
subclass of: SO_0000010

110480540
type: Gene
SIO_000068: ncbigene

position:275758:1
position: 275758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280846:1
position: 280846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275758-280846:1:exon

LOC110480540
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110480540
product: zinc finger protein 787
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021548561.2
SIO_010081: LOC110480540
subclass of: SO_0000673
so part of: LOC110480540
location: join(275758..275769,276303..276394,276757..276939,278554..278666,279366..280846)
location: region:275758-280846:1
so has part: feature:275758-275769:1:exon
so has part: feature:276303-276394:1:exon
so has part: feature:276757-276939:1:exon
so has part: feature:278554-278666:1:exon
so has part: feature:279366-280846:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275758-275769:1:exon

position:275769:1
position: 275769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:276303-276394:1:exon

position:276303:1
position: 276303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276394:1
position: 276394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276757-276939:1:exon

position:276757:1
position: 276757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276939:1
position: 276939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:278554-278666:1:exon

position:278554:1
position: 278554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278666:1
position: 278666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:279366-280846:1:exon

position:279366:1
position: 279366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110480540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110480540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 787
translation: METLGFGVRKGHPEAPIPLFPESLDAAAEPSALVAGASGGEWDDGTFLFPAPRPPRARGTPPPRAPRSPEPDGTPGASPGALRNAPGPSRAAEPPRALLDAAVPTGALMEQDEPDVVELQDSDEGDVVRRVFIADDGIVSDGEAEVLPHEIIRTVIPHGPLCPPPPRGTPAPAPGGSEEGGGRRGAGRQRPFICNECGKSFSHWSKLLRHQRTHTGERPSTCGECGKSFSQNSHLVQHRRTHTGEKPYRCGHCGKSFSWSSNLIQHQRIHTGERPYGCAECGKSFTQSKNLIKHQRTHAGPGAARPRRCAHPAGAPRALKGPRAGGEGEGPAGASGGCGQEPLICVECGESFARSAALRRHRRGHRPLFVP
SIO_010081: LOC110480540
subclass of: SO_0000673
so part of: LOC110480540
location: join(275758..275769,276303..276394,276757..276939,278554..278666,279366..280081)
location: region:275758-280081:1
so has part: feature:275758-275769:1:exon
so has part: feature:276303-276394:1:exon
so has part: feature:276757-276939:1:exon
so has part: feature:278554-278666:1:exon
so has part: feature:279366-280081:1:exon

XP_021404236.2
type: Protein
SIO_000068: ncbiprotein

position:280081:1
position: 280081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275758-275769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276303-276394:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276757-276939:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278554-278666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279366-280081:1:exon

HOXC13
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HOXC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 327703..368862
location: region:327703-368862:1
so has part: feature:327703-368862:1:exon
subclass of: SO_0000010

110479601
type: Gene
SIO_000068: ncbigene

position:327703:1
position: 327703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368862:1
position: 368862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327703-368862:1:exon

HOXC13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HOXC13
product: homeobox C13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021546988.1
SIO_010081: HOXC13
subclass of: SO_0000673
so part of: HOXC13
location: join(327703..328366,335720..335752,368645..368862)
location: region:327703-368862:1
so has part: feature:327703-328366:1:exon
so has part: feature:335720-335752:1:exon
so has part: feature:368645-368862:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:327703-328366:1:exon

position:328366:1
position: 328366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335720-335752:1:exon

position:335720:1
position: 335720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335752:1
position: 335752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:368645-368862:1:exon

position:368645:1
position: 368645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HOXC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C13
translation: MTAPLGLPPRWPDALGCRCEDAPREKPRMESLGHCRESLGHCRESLGHCRESLGHCREMLPHAGLAAPGGAAADGAAYAELASAEPPRQCPSGSLGYGGYPFAPGYYGCRLAGVNVQQKPCGYHPPDKFAEAGGPLAAEELPARAKEFSFYPGFPGSYQAVPGYLDVSVVPALGAHPEPRHEALLPMEGYQPWALASGWDGQVYCSKEQPQPAHLWKSPFPDVVPLQAEPSPYARARKKRKPYSKVQLAELEGEFLANEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLLLREQALSFF
SIO_010081: HOXC13
subclass of: SO_0000673
so part of: HOXC13
location: join(327703..328366,335720..335752,368645..368862)
location: region:327703-368862:1
so has part: feature:327703-328366:1:exon
so has part: feature:335720-335752:1:exon
so has part: feature:368645-368862:1:exon

XP_021402663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327703-328366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335720-335752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:368645-368862:1:exon

LOC110479600
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110479600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 386874..394209
location: region:386874-394209:1
so has part: feature:386874-394209:1:exon
subclass of: SO_0000010

110479600
type: Gene
SIO_000068: ncbigene

position:386874:1
position: 386874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394209:1
position: 394209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386874-394209:1:exon

LOC110479600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110479600
product: homeobox protein Hox-C11a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_021546987.1
SIO_010081: LOC110479600
subclass of: SO_0000673
so part of: LOC110479600
location: join(386874..387229,387314..387471,394205..394209)
location: region:386874-394209:1
so has part: feature:386874-387229:1:exon
so has part: feature:387314-387471:1:exon
so has part: feature:394205-394209:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386874-387229:1:exon

position:387229:1
position: 387229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:387314-387471:1:exon

position:387314:1
position: 387314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387471:1
position: 387471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:394205-394209:1:exon

position:394205:1
position: 394205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110479600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110479600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C11a
translation: MFNSVNLGNFCPSQTRKERGGGDFGDRAGNLYLPSCTYYVPDFPAVPPFAPARQISYPYAANLAQVPREVPYALEPSAKWHPRGNYAACCPAEELLHRECIPPAEVLVKSDEFHQHHHHRGSVLPQGFDRFLEGSAPDGPHGEDEEEDEEEENAKPGSAPGAKDGSKSGAAD
SIO_010081: LOC110479600
subclass of: SO_0000673
so part of: LOC110479600
location: join(386874..387229,387314..387471,394205..394209)
location: region:386874-394209:1
so has part: feature:386874-387229:1:exon
so has part: feature:387314-387471:1:exon
so has part: feature:394205-394209:1:exon

XP_021402662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386874-387229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387314-387471:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394205-394209:1:exon

HOXC10
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HOXC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 409175..416297
location: region:409175-416297:1
so has part: feature:409175-416297:1:exon
subclass of: SO_0000010

110479594
type: Gene
SIO_000068: ncbigene

position:409175:1
position: 409175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416297:1
position: 416297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409175-416297:1:exon

HOXC10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HOXC10
product: homeobox C10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
transcript id: XM_021546979.1
SIO_010081: HOXC10
subclass of: SO_0000673
so part of: HOXC10
location: join(409175..409802,416020..416297)
location: region:409175-416297:1
so has part: feature:409175-409802:1:exon
so has part: feature:416020-416297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:409175-409802:1:exon

position:409802:1
position: 409802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:416020-416297:1:exon

position:416020:1
position: 416020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HOXC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C10
translation: MSCPSSAAPGAFLMEPLARPEPFAAGPALFAQPGDFSPLRSCAALPQRDEPAPGSFPAYLAHLDTWAEPKGAFRLEPPSCAFPAVKEEGGCCMFPAEKRAKRAESAAEPALFASPPAEPCLGDREAPGPGYYRFPSLEKSPGPAFDGRGERLQPPEPLAPKFHRNCPENAAAEQPRGEIKGGKAKPEAEKEMSKSTDTASTDNSDSEAKEEAKAEGAGGTWLAARPGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSIALTDRQVKIWFQNRRMKLKKMNRENRVRELSAGFSFS
SIO_010081: HOXC10
subclass of: SO_0000673
so part of: HOXC10
location: join(409175..409802,416020..416297)
location: region:409175-416297:1
so has part: feature:409175-409802:1:exon
so has part: feature:416020-416297:1:exon

XP_021402654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409175-409802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:416020-416297:1:exon

HOXC9
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HOXC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 427920..430575
location: region:427920-430575:1
so has part: feature:427920-430575:1:exon
subclass of: SO_0000010

110479599
type: Gene
SIO_000068: ncbigene

position:427920:1
position: 427920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430575:1
position: 430575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427920-430575:1:exon

HOXC9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HOXC9
product: homeobox C9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021546986.1
SIO_010081: HOXC9
subclass of: SO_0000673
so part of: HOXC9
location: join(427920..428448,430331..430575)
location: region:427920-430575:1
so has part: feature:427920-428448:1:exon
so has part: feature:430331-430575:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:427920-428448:1:exon

position:428448:1
position: 428448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:430331-430575:1:exon

position:430331:1
position: 430331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HOXC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C9
translation: MSASGPISNYYVDSLIGPDNEELLAPRFAGPGAARPAALVPDCADFPSCSFAPKPAVFTTSWAPVPSQPSVGYPHPAGPYGPQAAEPRYVRTWLEPLAGAVSFPAFGARPYGLKADAFGAPRRAECGPADGRAYADFVYAAPGELRERAAQNIPSSPESEAIAAGKHKEEKHELDPNNPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKMNKEKSDKDQQ
SIO_010081: HOXC9
subclass of: SO_0000673
so part of: HOXC9
location: join(427920..428448,430331..430575)
location: region:427920-430575:1
so has part: feature:427920-428448:1:exon
so has part: feature:430331-430575:1:exon

XP_021402661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427920-428448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430331-430575:1:exon

HOXC8
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HOXC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 441458..449824
location: region:441458-449824:1
so has part: feature:441458-449824:1:exon
subclass of: SO_0000010

110479595
type: Gene
SIO_000068: ncbigene

position:441458:1
position: 441458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449824:1
position: 449824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441458-449824:1:exon

HOXC8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HOXC8
product: homeobox C8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_021546980.1
SIO_010081: HOXC8
subclass of: SO_0000673
so part of: HOXC8
location: join(441458..441905,444866..444868,449529..449824)
location: region:441458-449824:1
so has part: feature:441458-441905:1:exon
so has part: feature:444866-444868:1:exon
so has part: feature:449529-449824:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441458-441905:1:exon

position:441905:1
position: 441905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:444866-444868:1:exon

position:444866:1
position: 444866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444868:1
position: 444868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:449529-449824:1:exon

position:449529:1
position: 449529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HOXC8
product: homeobox C8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
transcript id: XM_021546981.1
SIO_010081: HOXC8
subclass of: SO_0000673
so part of: HOXC8
location: join(441458..441905,449529..449824)
location: region:441458-449824:1
so has part: feature:441458-441905:1:exon
so has part: feature:449529-449824:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441458-441905:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449529-449824:1:exon

HOXC8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HOXC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C8 isoform X2
translation: MSSYFVNPLFSKYKGGESLEPTYYDCRFPQGVGRSPAVLYGPGGAAPSFQHPSHHVQEFFHHGASGISGASGYQQNAPCALPCHGDASKFYGYEALPRQLYGAQQDAPAVPYADCKASAGGGGGGGEGQAAHLSQSSSPSLMFPWMRPHAAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLSERQVKIWFQNRRMKWKKENNKDKLPGAARDDDKGEEEGNEEEEKDDEDKEESKD
SIO_010081: HOXC8
subclass of: SO_0000673
so part of: HOXC8
location: join(441458..441905,444866..444868,449529..449824)
location: region:441458-449824:1
so has part: feature:441458-441905:1:exon
so has part: feature:444866-444868:1:exon
so has part: feature:449529-449824:1:exon

XP_021402655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441458-441905:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:444866-444868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449529-449824:1:exon

HOXC8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HOXC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C8 isoform X1
translation: MSSYFVNPLFSKYKGGESLEPTYYDCRFPQGVGRSPAVLYGPGGAAPSFQHPSHHVQEFFHHGASGISGASGYQQNAPCALPCHGDASKFYGYEALPRQLYGAQQDAPAVPYADCKASAGGGGGGGEGQAAHLSQSSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLSERQVKIWFQNRRMKWKKENNKDKLPGAARDDDKGEEEGNEEEEKDDEDKEESKD
SIO_010081: HOXC8
subclass of: SO_0000673
so part of: HOXC8
location: join(441458..441905,449529..449824)
location: region:441458-449824:1
so has part: feature:441458-441905:1:exon
so has part: feature:449529-449824:1:exon

XP_021402656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441458-441905:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449529-449824:1:exon

HOXC6
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HOXC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 471729..474455
location: region:471729-474455:1
so has part: feature:471729-474455:1:exon
subclass of: SO_0000010

110479597
type: Gene
SIO_000068: ncbigene

position:471729:1
position: 471729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474455:1
position: 474455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471729-474455:1:exon

HOXC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HOXC6
product: homeobox C6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021546984.1
SIO_010081: HOXC6
subclass of: SO_0000673
so part of: HOXC6
location: join(471729..472149,474082..474455)
location: region:471729-474455:1
so has part: feature:471729-472149:1:exon
so has part: feature:474082-474455:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:471729-472149:1:exon

position:472149:1
position: 472149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:474082-474455:1:exon

position:474082:1
position: 474082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HOXC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C6
translation: MNSYFTNPSLSCHLGGGQDVLPNVAALNSSYDPVRHFGGYGAAVAQNRIYSSPFYSPQDNPVVFGSGRSPYEYGSNAFYQDKEVLSSCRQSSVGAHGAANSIAQDFPSEQSRGAAQEQKSGIQIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKETNLSSTLAGAAGGGGGGGGGGGGGGGGGGGGGGGGGAAAADSLAKEEKRDETEEEKKE
SIO_010081: HOXC6
subclass of: SO_0000673
so part of: HOXC6
location: join(471744..472149,474082..474455)
location: region:471744-474455:1
so has part: feature:471744-472149:1:exon
so has part: feature:474082-474455:1:exon

XP_021402659.1
type: Protein
SIO_000068: ncbiprotein

position:471744:1
position: 471744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471744-472149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:474082-474455:1:exon

LOC110479598
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110479598
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 507840..516724
location: region:507840-516724:1
so has part: feature:507840-516724:1:exon
subclass of: SO_0000010

110479598
type: Gene
SIO_000068: ncbigene

position:507840:1
position: 507840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516724:1
position: 516724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507840-516724:1:exon

LOC110479598
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110479598
product: homeobox protein Hox-C4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_021546985.1
SIO_010081: LOC110479598
subclass of: SO_0000673
so part of: LOC110479598
location: join(507840..508148,516449..516724)
location: region:507840-516724:1
so has part: feature:507840-508148:1:exon
so has part: feature:516449-516724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507840-508148:1:exon

position:508148:1
position: 508148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:516449-516724:1:exon

position:516449:1
position: 516449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110479598
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110479598
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C4
translation: MTMSSYLMDSGYVEPKFPPCEEYSQGDFIPELYGRREPGCPQHPAAFGAFPERPPGCGRGGGGGGGGGGGRQRLADEPPGPCAQPAAAPGKAPLVYPWMKKMHPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLGLSERQIKIWFQNRRMKWKKDHRLPNTKSRGSAAPAEPPPPAEPPRPEHLTRL
SIO_010081: LOC110479598
subclass of: SO_0000673
so part of: LOC110479598
location: join(507840..508148,516449..516724)
location: region:507840-516724:1
so has part: feature:507840-508148:1:exon
so has part: feature:516449-516724:1:exon

XP_021402660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507840-508148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516449-516724:1:exon

HNRNPA1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HNRNPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 566678..577527
location: region:566678-577527:1
so has part: feature:566678-577527:1:exon
subclass of: SO_0000010

110479592
type: Gene
SIO_000068: ncbigene

position:566678:1
position: 566678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577527:1
position: 577527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566678-577527:1:exon

HNRNPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HNRNPA1
product: heterogeneous nuclear ribonucleoprotein A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 7 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021546978.1
SIO_010081: HNRNPA1
subclass of: SO_0000673
so part of: HNRNPA1
location: join(566678..566777,568765..568881,570653..570799,571412..571622,572681..572773,572841..572967,573916..573959,574086..574262,576289..576411,577465..577527)
location: region:566678-577527:1
so has part: feature:566678-566777:1:exon
so has part: feature:568765-568881:1:exon
so has part: feature:570653-570799:1:exon
so has part: feature:571412-571622:1:exon
so has part: feature:572681-572773:1:exon
so has part: feature:572841-572967:1:exon
so has part: feature:573916-573959:1:exon
so has part: feature:574086-574262:1:exon
so has part: feature:576289-576411:1:exon
so has part: feature:577465-577527:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:566678-566777:1:exon

position:566777:1
position: 566777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:568765-568881:1:exon

position:568765:1
position: 568765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568881:1
position: 568881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:570653-570799:1:exon

position:570653:1
position: 570653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570799:1
position: 570799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:571412-571622:1:exon

position:571412:1
position: 571412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571622:1
position: 571622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:572681-572773:1:exon

position:572681:1
position: 572681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572773:1
position: 572773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:572841-572967:1:exon

position:572841:1
position: 572841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572967:1
position: 572967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:573916-573959:1:exon

position:573916:1
position: 573916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573959:1
position: 573959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:574086-574262:1:exon

position:574086:1
position: 574086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574262:1
position: 574262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:576289-576411:1:exon

position:576289:1
position: 576289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576411:1
position: 576411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:577465-577527:1:exon

position:577465:1
position: 577465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HNRNPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HNRNPA1
product: heterogeneous nuclear ribonucleoprotein A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021546977.1
SIO_010081: HNRNPA1
subclass of: SO_0000673
so part of: HNRNPA1
location: join(566678..566777,568765..568881,570653..570799,571412..571622,572681..572773,572841..572939,574086..574262,576289..576411,577465..577527)
location: region:566678-577527:1
so has part: feature:566678-566777:1:exon
so has part: feature:568765-568881:1:exon
so has part: feature:570653-570799:1:exon
so has part: feature:571412-571622:1:exon
so has part: feature:572681-572773:1:exon
so has part: feature:572841-572939:1:exon
so has part: feature:574086-574262:1:exon
so has part: feature:576289-576411:1:exon
so has part: feature:577465-577527:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:566678-566777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568765-568881:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570653-570799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:571412-571622:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572681-572773:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572841-572939:1:exon

position:572939:1
position: 572939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:574086-574262:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576289-576411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:577465-577527:1:exon

HNRNPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HNRNPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein A1 isoform X2
translation: MAKAESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLREYFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASAGQRGRSGSGNFGGGGGRGGGFGGGDNFNRGGNFGGRGEWGTGTGMGAGFGGAGFGRFGADGYGGGGGPGYSGGNRGYGGSGSYDGYNNGGGGFGGGSGGRRPARGPALAVRNGLGEAGTGSNFGGGGSYNDFGSYNNQASSFGPMKGGSFGGRSSGPYGGGGYGSSSGGGSYGGGRRF
SIO_010081: HNRNPA1
subclass of: SO_0000673
so part of: HNRNPA1
location: join(566763..566777,568765..568881,570653..570799,571412..571622,572681..572773,572841..572967,573916..573959,574086..574262,576289..576411,577465..577520)
location: region:566763-577520:1
so has part: feature:566763-566777:1:exon
so has part: feature:568765-568881:1:exon
so has part: feature:570653-570799:1:exon
so has part: feature:571412-571622:1:exon
so has part: feature:572681-572773:1:exon
so has part: feature:572841-572967:1:exon
so has part: feature:573916-573959:1:exon
so has part: feature:574086-574262:1:exon
so has part: feature:576289-576411:1:exon
so has part: feature:577465-577520:1:exon

XP_021402653.1
type: Protein
SIO_000068: ncbiprotein

position:566763:1
position: 566763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577520:1
position: 577520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566763-566777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568765-568881:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570653-570799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:571412-571622:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572681-572773:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572841-572967:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573916-573959:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574086-574262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576289-576411:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:577465-577520:1:exon

HNRNPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HNRNPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein A1 isoform X1
translation: MAKAESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLREYFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASAGQRGRSGSGNFGGGGGRGGGFGGGDNFNRGGNFGGRGYGGGGGPGYSGGNRGYGGSGSYDGYNNGGGGFGGGSGGRRPARGPALAVRNGLGEAGTGSNFGGGGSYNDFGSYNNQASSFGPMKGGSFGGRSSGPYGGGGYGSSSGGGSYGGGRRF
SIO_010081: HNRNPA1
subclass of: SO_0000673
so part of: HNRNPA1
location: join(566763..566777,568765..568881,570653..570799,571412..571622,572681..572773,572841..572939,574086..574262,576289..576411,577465..577520)
location: region:566763-577520:1
so has part: feature:566763-566777:1:exon
so has part: feature:568765-568881:1:exon
so has part: feature:570653-570799:1:exon
so has part: feature:571412-571622:1:exon
so has part: feature:572681-572773:1:exon
so has part: feature:572841-572939:1:exon
so has part: feature:574086-574262:1:exon
so has part: feature:576289-576411:1:exon
so has part: feature:577465-577520:1:exon

XP_021402652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:566763-566777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568765-568881:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570653-570799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:571412-571622:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572681-572773:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572841-572939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:574086-574262:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576289-576411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:577465-577520:1:exon

COPZ1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: COPZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 581841..586626
location: region:581841-586626:1
so has part: feature:581841-586626:1:exon
subclass of: SO_0000010

110479602
type: Gene
SIO_000068: ncbigene

position:581841:1
position: 581841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586626:1
position: 586626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581841-586626:1:exon

COPZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: COPZ1
product: COPI coat complex subunit zeta 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_021546991.2
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: join(581841..581906,582697..582765,583055..583136,583358..583449,583688..583743,583967..584044,585289..585340,585679..585717,586064..586626)
location: region:581841-586626:1
so has part: feature:581841-581906:1:exon
so has part: feature:582697-582765:1:exon
so has part: feature:583055-583136:1:exon
so has part: feature:583358-583449:1:exon
so has part: feature:583688-583743:1:exon
so has part: feature:583967-584044:1:exon
so has part: feature:585289-585340:1:exon
so has part: feature:585679-585717:1:exon
so has part: feature:586064-586626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581841-581906:1:exon

position:581906:1
position: 581906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:582697-582765:1:exon

position:582697:1
position: 582697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582765:1
position: 582765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:583055-583136:1:exon

position:583055:1
position: 583055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583136:1
position: 583136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:583358-583449:1:exon

position:583358:1
position: 583358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583449:1
position: 583449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:583688-583743:1:exon

position:583688:1
position: 583688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583743:1
position: 583743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:583967-584044:1:exon

position:583967:1
position: 583967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584044:1
position: 584044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:585289-585340:1:exon

position:585289:1
position: 585289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585340:1
position: 585340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:585679-585717:1:exon

position:585679:1
position: 585679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585717:1
position: 585717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:586064-586626:1:exon

position:586064:1
position: 586064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COPZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: COPZ1
product: COPI coat complex subunit zeta 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_021546992.2
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: join(581841..581906,582697..582765,583055..583136,583358..583449,583688..583743,583967..584044,585289..585340,585679..585717,586249..586626)
location: region:581841-586626:1
so has part: feature:581841-581906:1:exon
so has part: feature:582697-582765:1:exon
so has part: feature:583055-583136:1:exon
so has part: feature:583358-583449:1:exon
so has part: feature:583688-583743:1:exon
so has part: feature:583967-584044:1:exon
so has part: feature:585289-585340:1:exon
so has part: feature:585679-585717:1:exon
so has part: feature:586249-586626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581841-581906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582697-582765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583055-583136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583358-583449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583688-583743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583967-584044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585289-585340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:585679-585717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586249-586626:1:exon

position:586249:1
position: 586249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COPZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: COPZ1
product: COPI coat complex subunit zeta 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021546989.2
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: join(581868..581906,582652..582765,583055..583136,583358..583449,583688..583743,583967..584044,585289..585340,585679..585717,586064..586626)
location: region:581868-586626:1
so has part: feature:581868-581906:1:exon
so has part: feature:582652-582765:1:exon
so has part: feature:583055-583136:1:exon
so has part: feature:583358-583449:1:exon
so has part: feature:583688-583743:1:exon
so has part: feature:583967-584044:1:exon
so has part: feature:585289-585340:1:exon
so has part: feature:585679-585717:1:exon
so has part: feature:586064-586626:1:exon

position:581868:1
position: 581868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581868-581906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582652-582765:1:exon

position:582652:1
position: 582652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:583055-583136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583358-583449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583688-583743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583967-584044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585289-585340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:585679-585717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586064-586626:1:exon

COPZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: COPZ1
product: COPI coat complex subunit zeta 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021546990.2
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: join(581868..581906,582652..582765,583055..583136,583358..583449,583688..583743,583967..584044,585289..585340,585679..585717,586249..586626)
location: region:581868-586626:1
so has part: feature:581868-581906:1:exon
so has part: feature:582652-582765:1:exon
so has part: feature:583055-583136:1:exon
so has part: feature:583358-583449:1:exon
so has part: feature:583688-583743:1:exon
so has part: feature:583967-584044:1:exon
so has part: feature:585289-585340:1:exon
so has part: feature:585679-585717:1:exon
so has part: feature:586249-586626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581868-581906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582652-582765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583055-583136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583358-583449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583688-583743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583967-584044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585289-585340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:585679-585717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586249-586626:1:exon

COPZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: COPZ1
product: COPI coat complex subunit zeta 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021546993.2
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: join(581868..581906,582652..582765,583055..583136,583358..583449,583688..583743,583967..584044,585679..585717,586064..586626)
location: region:581868-586626:1
so has part: feature:581868-581906:1:exon
so has part: feature:582652-582765:1:exon
so has part: feature:583055-583136:1:exon
so has part: feature:583358-583449:1:exon
so has part: feature:583688-583743:1:exon
so has part: feature:583967-584044:1:exon
so has part: feature:585679-585717:1:exon
so has part: feature:586064-586626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581868-581906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582652-582765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583055-583136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583358-583449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583688-583743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583967-584044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585679-585717:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586064-586626:1:exon

COPZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: COPZ1
product: COPI coat complex subunit zeta 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021546994.2
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: join(581868..581906,582652..582765,583055..583136,583358..583449,583688..583743,583967..584044,585679..585717,586249..586626)
location: region:581868-586626:1
so has part: feature:581868-581906:1:exon
so has part: feature:582652-582765:1:exon
so has part: feature:583055-583136:1:exon
so has part: feature:583358-583449:1:exon
so has part: feature:583688-583743:1:exon
so has part: feature:583967-584044:1:exon
so has part: feature:585679-585717:1:exon
so has part: feature:586249-586626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581868-581906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582652-582765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583055-583136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583358-583449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583688-583743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583967-584044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585679-585717:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586249-586626:1:exon

COPZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: COPZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-1 isoform X2
translation: METLVLGCGGTVLVPVLSRPQEPSLYTVKAIIILDNDGERLFAKYYDDTYPSVKEQRAFEKNIFNKTHRSDSEIALLDGLTVVYKSSIDLYCCVIGSATQNELMLTAVLNCLFDSLSQMLRKNVERRALLDNMEGLFLAVDEIVDGGVILESDPQQVVHRVAVRGEDVPLTEQTVSQVLQAAKEQIKWSLLR
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: join(581889..581906,582652..582765,583055..583136,583358..583449,583688..583743,583967..584044,585289..585340,585679..585717,586249..586296)
location: region:581889-586296:1
so has part: feature:581889-581906:1:exon
so has part: feature:582652-582765:1:exon
so has part: feature:583055-583136:1:exon
so has part: feature:583358-583449:1:exon
so has part: feature:583688-583743:1:exon
so has part: feature:583967-584044:1:exon
so has part: feature:585289-585340:1:exon
so has part: feature:585679-585717:1:exon
so has part: feature:586249-586296:1:exon

XP_021402665.1
type: Protein
SIO_000068: ncbiprotein

position:581889:1
position: 581889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586296:1
position: 586296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581889-581906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582652-582765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583055-583136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583358-583449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583688-583743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583967-584044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585289-585340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:585679-585717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586249-586296:1:exon

COPZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: COPZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-1 isoform X4
translation: METLVLEPSLYTVKAIIILDNDGERLFAKYYDDTYPSVKEQRAFEKNIFNKTHRSDSEIALLDGLTVVYKSSIDLYCCVIGSATQNELMLTAVLNCLFDSLSQMLRKNVERRALLDNMEGLFLAVDEIVDGGVILESDPQQVVHRVAVRGEDVPLTEQTVSQVLQAAKEQIKWSLLR
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: join(581889..581906,582697..582765,583055..583136,583358..583449,583688..583743,583967..584044,585289..585340,585679..585717,586249..586296)
location: region:581889-586296:1
so has part: feature:581889-581906:1:exon
so has part: feature:582697-582765:1:exon
so has part: feature:583055-583136:1:exon
so has part: feature:583358-583449:1:exon
so has part: feature:583688-583743:1:exon
so has part: feature:583967-584044:1:exon
so has part: feature:585289-585340:1:exon
so has part: feature:585679-585717:1:exon
so has part: feature:586249-586296:1:exon

XP_021402667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581889-581906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582697-582765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583055-583136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583358-583449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583688-583743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583967-584044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585289-585340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:585679-585717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586249-586296:1:exon

COPZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: COPZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-1 isoform X1
translation: METLVLGCGGTVLVPVLSRPQEPSLYTVKAIIILDNDGERLFAKYYDDTYPSVKEQRAFEKNIFNKTHRSDSEIALLDGLTVVYKSSIDLYCCVIGSATQNELMLTAVLNCLFDSLSQMLRKNVERRALLDNMEGLFLAVDEIVDGGVILESDPQQVVHRVAVRGEDVPLTEQTVSQVLQAAKEQIKWTLLR
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: join(581889..581906,582652..582765,583055..583136,583358..583449,583688..583743,583967..584044,585289..585340,585679..585717,586064..586111)
location: region:581889-586111:1
so has part: feature:581889-581906:1:exon
so has part: feature:582652-582765:1:exon
so has part: feature:583055-583136:1:exon
so has part: feature:583358-583449:1:exon
so has part: feature:583688-583743:1:exon
so has part: feature:583967-584044:1:exon
so has part: feature:585289-585340:1:exon
so has part: feature:585679-585717:1:exon
so has part: feature:586064-586111:1:exon

XP_021402664.1
type: Protein
SIO_000068: ncbiprotein

position:586111:1
position: 586111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581889-581906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582652-582765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583055-583136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583358-583449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583688-583743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583967-584044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585289-585340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:585679-585717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586064-586111:1:exon

COPZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: COPZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-1 isoform X3
translation: METLVLEPSLYTVKAIIILDNDGERLFAKYYDDTYPSVKEQRAFEKNIFNKTHRSDSEIALLDGLTVVYKSSIDLYCCVIGSATQNELMLTAVLNCLFDSLSQMLRKNVERRALLDNMEGLFLAVDEIVDGGVILESDPQQVVHRVAVRGEDVPLTEQTVSQVLQAAKEQIKWTLLR
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: join(581889..581906,582697..582765,583055..583136,583358..583449,583688..583743,583967..584044,585289..585340,585679..585717,586064..586111)
location: region:581889-586111:1
so has part: feature:581889-581906:1:exon
so has part: feature:582697-582765:1:exon
so has part: feature:583055-583136:1:exon
so has part: feature:583358-583449:1:exon
so has part: feature:583688-583743:1:exon
so has part: feature:583967-584044:1:exon
so has part: feature:585289-585340:1:exon
so has part: feature:585679-585717:1:exon
so has part: feature:586064-586111:1:exon

XP_021402666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581889-581906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582697-582765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583055-583136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583358-583449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583688-583743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583967-584044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585289-585340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:585679-585717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586064-586111:1:exon

COPZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: COPZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-1 isoform X5
translation: METLVLGCGGTVLVPVLSRPQEPSLYTVKAIIILDNDGERLFAKYYDDTYPSVKEQRAFEKNIFNKTHRSDSEIALLDGLTVVYKSSIDLYCCVIGSATQNELMLTAVLNCLFDSLSQMLRKNVERRALLDNMEGLFLAVDEIVDGGARTCP
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: join(581889..581906,582652..582765,583055..583136,583358..583449,583688..583743,583967..584044,585679..585697)
location: region:581889-585697:1
so has part: feature:581889-581906:1:exon
so has part: feature:582652-582765:1:exon
so has part: feature:583055-583136:1:exon
so has part: feature:583358-583449:1:exon
so has part: feature:583688-583743:1:exon
so has part: feature:583967-584044:1:exon
so has part: feature:585679-585697:1:exon

XP_021402668.1
type: Protein
SIO_000068: ncbiprotein

position:585697:1
position: 585697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581889-581906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582652-582765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583055-583136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583358-583449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583688-583743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583967-584044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585679-585697:1:exon

COPZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: COPZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit zeta-1 isoform X5
translation: METLVLGCGGTVLVPVLSRPQEPSLYTVKAIIILDNDGERLFAKYYDDTYPSVKEQRAFEKNIFNKTHRSDSEIALLDGLTVVYKSSIDLYCCVIGSATQNELMLTAVLNCLFDSLSQMLRKNVERRALLDNMEGLFLAVDEIVDGGARTCP
SIO_010081: COPZ1
subclass of: SO_0000673
so part of: COPZ1
location: join(581889..581906,582652..582765,583055..583136,583358..583449,583688..583743,583967..584044,585679..585697)
location: region:581889-585697:1
so has part: feature:581889-581906:1:exon
so has part: feature:582652-582765:1:exon
so has part: feature:583055-583136:1:exon
so has part: feature:583358-583449:1:exon
so has part: feature:583688-583743:1:exon
so has part: feature:583967-584044:1:exon
so has part: feature:585679-585697:1:exon

XP_021402669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581889-581906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582652-582765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583055-583136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583358-583449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583688-583743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583967-584044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585679-585697:1:exon

LOC110479596
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110479596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(614644..616379)
location: region:614644-616379:-1
so has part: feature:614644-616379:-1:exon
subclass of: SO_0000010

110479596
type: Gene
SIO_000068: ncbigene

position:614644:-1
position: 614644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616379:-1
position: 616379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614644-616379:-1:exon

LOC110479596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110479596
product: uncharacterized LOC110479596, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031507249.1
SIO_010081: LOC110479596
subclass of: SO_0000673
so part of: LOC110479596
location: complement(join(614644..615172,615231..615429,615481..615547,615610..616165,616201..616379))
location: region:614644-616379:-1
so has part: feature:616201-616379:-1:exon
so has part: feature:615610-616165:-1:exon
so has part: feature:615481-615547:-1:exon
so has part: feature:615231-615429:-1:exon
so has part: feature:614644-615172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616201-616379:-1:exon

position:616201:-1
position: 616201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615610-616165:-1:exon

position:615610:-1
position: 615610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616165:-1
position: 616165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:615481-615547:-1:exon

position:615481:-1
position: 615481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615547:-1
position: 615547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:615231-615429:-1:exon

position:615231:-1
position: 615231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615429:-1
position: 615429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:614644-615172:-1:exon

position:615172:-1
position: 615172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110479596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110479596
product: uncharacterized LOC110479596, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031507248.1
SIO_010081: LOC110479596
subclass of: SO_0000673
so part of: LOC110479596
location: complement(join(614644..615172,615231..615547,615610..616165,616201..616379))
location: region:614644-616379:-1
so has part: feature:616201-616379:-1:exon
so has part: feature:615610-616165:-1:exon
so has part: feature:615231-615547:-1:exon
so has part: feature:614644-615172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616201-616379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615610-616165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615231-615547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614644-615172:-1:exon

LOC110479596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110479596
product: uncharacterized LOC110479596, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021546982.2
SIO_010081: LOC110479596
subclass of: SO_0000673
so part of: LOC110479596
location: complement(join(614644..615547,615610..616165,616201..616379))
location: region:614644-616379:-1
so has part: feature:616201-616379:-1:exon
so has part: feature:615610-616165:-1:exon
so has part: feature:614644-615547:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616201-616379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615610-616165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614644-615547:-1:exon

LOC110479596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110479596
product: uncharacterized LOC110479596, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021546983.2
SIO_010081: LOC110479596
subclass of: SO_0000673
so part of: LOC110479596
location: complement(join(614644..615172,615231..616165,616201..616379))
location: region:614644-616379:-1
so has part: feature:616201-616379:-1:exon
so has part: feature:615231-616165:-1:exon
so has part: feature:614644-615172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616201-616379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615231-616165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614644-615172:-1:exon

LOC110479596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110479596
product: uncharacterized LOC110479596, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031507247.1
SIO_010081: LOC110479596
subclass of: SO_0000673
so part of: LOC110479596
location: complement(join(614644..616165,616201..616379))
location: region:614644-616379:-1
so has part: feature:616201-616379:-1:exon
so has part: feature:614644-616165:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616201-616379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:614644-616165:-1:exon

LOC110479596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110479596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110479596 isoform X3
translation: MVWGHSVAWRYPTAWGPPQGQCHLRGRVTRLGDIPHSTALARDTHGAHPHTGTATTALGTLSQNCHRTGDTVTELSPGSGHCHRTVTALGTLSPLWGHCPKTVTGLRTLPPPWGHCHRTVTGLRTLPPPWGHCPKTVTGLRTLPPPWGHCHRTVTVLGTLSQNCHRPGDTVPGTVPRLSQNCHRPGEPPGCVLKAQLPPPGWGHQTGNPRTGNNPRCVTSGNCHHGSCHHRNGNCHQWELPPWDWELSPPDRELSPRHRELLARGVTPSWHRHGRGRGHRQDTEGTLLGHRATAGDTRGTPVGHPWDTRTRPQRCHLPRDRTCGWENRAPLAPGGGVTVSQCHGVTVSRCHGVTVSPCPSATRGRCHPLLLPPAATRCPQMPPPCTAPPHLTLH
SIO_010081: LOC110479596
subclass of: SO_0000673
so part of: LOC110479596
location: complement(join(614717..615172,615231..615429,615481..615547,615610..616072))
location: region:614717-616072:-1
so has part: feature:615610-616072:-1:exon
so has part: feature:615481-615547:-1:exon
so has part: feature:615231-615429:-1:exon
so has part: feature:614717-615172:-1:exon

XP_031363109.1
type: Protein
SIO_000068: ncbiprotein

position:614717:-1
position: 614717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616072:-1
position: 616072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615610-616072:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615481-615547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615231-615429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614717-615172:-1:exon

LOC110479596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110479596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110479596 isoform X2
translation: MVWGHSVAWRYPTAWGPPQGQCHLRGRVTRLGDIPHSTALARDTHGAHPHTGTATTALGTLSQNCHRTGDTVTELSPGSGHCHRTVTALGTLSPLWGHCPKTVTGLRTLPPPWGHCHRTVTGLRTLPPPWGHCPKTVTGLRTLPPPWGHCHRTVTVLGTLSQNCHRPGDTVPGTVPRLSQNCHQAQDTVTALGTLSQNCHRPGEPPGCVLKAQLPPPGWGHQTGNPRTGNNPRCVTSGNCHHGSCHHRNGNCHQWELPPWDWELSPPDRELSPRHRELLARGVTPSWHRHGRGRGHRQDTEGTLLGHRATAGDTRGTPVGHPWDTRTRPQRCHLPRDRTCGWENRAPLAPGGGVTVSQCHGVTVSRCHGVTVSPCPSATRGRCHPLLLPPAATRCPQMPPPCTAPPHLTLH
SIO_010081: LOC110479596
subclass of: SO_0000673
so part of: LOC110479596
location: complement(join(614717..615172,615231..615547,615610..616072))
location: region:614717-616072:-1
so has part: feature:615610-616072:-1:exon
so has part: feature:615231-615547:-1:exon
so has part: feature:614717-615172:-1:exon

XP_031363108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615610-616072:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615231-615547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614717-615172:-1:exon

LOC110479596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110479596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110479596 isoform X1
translation: MVWGHSVAWRYPTAWGPPQGQCHLRGRVTRLGDIPHSTALARDTHGAHPHTGTATTALGTLSQNCHRTGDTVTELSPGSGHCHRTVTALGTLSPLWGHCPKTVTGLRTLPPPWGHCHRTVTGLRTLPPPWGHCPKTVTGLRTLPPPWGHCHRTVTVLRTLSQNCHRPGDTVTELSLCWGHCPKTVTALGTLSRELSPGCHRTVTRLRTLSPPWGRCHRTVTALGNHQDVSSRHSCHHRVGDTKLGTPGLGTTRDVSPAGTVTMGAVTTGMGIVTSGNCHHGTGNCHRQTRNCHLWELSPWDWELSPPDRELSPRHRELLARGVTPSWHRHGRGRGHRQDTEGTLLGHRATAGDTRGTPVGHPWDTRTRPQRCHLPRDRTCGWENRAPLAPGGGVTVSQCHGVTVSRCHGVTVSPCPSATRGRCHPLLLPPAATRCPQMPPPCTAPPHLTLH
SIO_010081: LOC110479596
subclass of: SO_0000673
so part of: LOC110479596
location: complement(614717..616072)
location: region:614717-616072:-1
so has part: feature:614717-616072:-1:exon

XP_031363107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:614717-616072:-1:exon

LOC110479596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110479596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110479596 isoform X4
translation: MVWGHSVAWRYPTAWGPPQGQCHLRGRVTRLGDIPHSTALARDTHGAHPHTGTATTALGTLSQNCHRTGDTVTELSPGSGHCHRTVTALGTLSPLWGHCPKTVTGLRTLPPPWGHCHRTVTGLRTLPPPWGHCPKTVTGLRTLPPPWGHCHRTVTVLGTLSQNCHRPGDTVPGTVPRLSQNCHQAQDTVTALGTLSQNCHRPGEPPGCVLKAQLPPPGWGHQTGNPRTGNNPRCVTSGNCHHGSCHHRNGNCHQWELPPWDWELSPPDQELSPVGIVTMGLGIVTSRPGIVTTAPGAAGTWGDTELAPTRTRQGTPAGH
SIO_010081: LOC110479596
subclass of: SO_0000673
so part of: LOC110479596
location: complement(join(615051..615547,615610..616072))
location: region:615051-616072:-1
so has part: feature:615610-616072:-1:exon
so has part: feature:615051-615547:-1:exon

XP_021402657.1
type: Protein
SIO_000068: ncbiprotein

position:615051:-1
position: 615051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615610-616072:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615051-615547:-1:exon

LOC110479596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110479596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110479596 isoform X5
translation: MVWGHSVAWRYPTAWGPPQGQCHLRGRVTRLGDIPHSTALARDTHGAHPHTGTATTALGTLSQNCHRTGDTVTELSPGSGHCHRTVTALGTLSPLWGHCPKTVTGLRTLPPPWGHCHRTVTGLRTLPPPWGHCPKTVTGLRTLPPPWGHCHRTVTVLRTLSQNCHRPGDTVTELSLCWGHCPKTVTALGTLSRELSPGCHRTVTRLRTLSPPWGRCHRTVTALGNHQDVSSRHSCHHRVGDTKLGTPGLGTTRDVSPAGTVTMGAVTTGMGIVTSGNCHHGTGNCHLQTGNCHHGTGSCWHVG
SIO_010081: LOC110479596
subclass of: SO_0000673
so part of: LOC110479596
location: complement(join(615103..615172,615231..616072))
location: region:615103-616072:-1
so has part: feature:615231-616072:-1:exon
so has part: feature:615103-615172:-1:exon

XP_021402658.1
type: Protein
SIO_000068: ncbiprotein

position:615103:-1
position: 615103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615231-616072:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615103-615172:-1:exon

PDE1B
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PDE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 652474..664634
location: region:652474-664634:1
so has part: feature:652474-664634:1:exon
subclass of: SO_0000010

110481644
type: Gene
SIO_000068: ncbigene

position:652474:1
position: 652474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664634:1
position: 664634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652474-664634:1:exon

PDE1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PDE1B
product: phosphodiesterase 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021550369.2
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: join(652474..652657,657551..657617,658169..658285,659455..659595,661034..661134,662121..662246,662334..662435,662531..662651,662724..662805,662893..663019,663105..663241,663881..663994,664226..664634)
location: region:652474-664634:1
so has part: feature:652474-652657:1:exon
so has part: feature:657551-657617:1:exon
so has part: feature:658169-658285:1:exon
so has part: feature:659455-659595:1:exon
so has part: feature:661034-661134:1:exon
so has part: feature:662121-662246:1:exon
so has part: feature:662334-662435:1:exon
so has part: feature:662531-662651:1:exon
so has part: feature:662724-662805:1:exon
so has part: feature:662893-663019:1:exon
so has part: feature:663105-663241:1:exon
so has part: feature:663881-663994:1:exon
so has part: feature:664226-664634:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:652474-652657:1:exon

position:652657:1
position: 652657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:657551-657617:1:exon

position:657551:1
position: 657551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657617:1
position: 657617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:658169-658285:1:exon

position:658169:1
position: 658169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658285:1
position: 658285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:659455-659595:1:exon

position:659455:1
position: 659455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659595:1
position: 659595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:661034-661134:1:exon

position:661034:1
position: 661034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661134:1
position: 661134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:662121-662246:1:exon

position:662121:1
position: 662121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662246:1
position: 662246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:662334-662435:1:exon

position:662334:1
position: 662334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662435:1
position: 662435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:662531-662651:1:exon

position:662531:1
position: 662531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662651:1
position: 662651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:662724-662805:1:exon

position:662724:1
position: 662724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662805:1
position: 662805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:662893-663019:1:exon

position:662893:1
position: 662893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663019:1
position: 663019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:663105-663241:1:exon

position:663105:1
position: 663105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663241:1
position: 663241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:663881-663994:1:exon

position:663881:1
position: 663881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663994:1
position: 663994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:664226-664634:1:exon

position:664226:1
position: 664226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDE1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PDE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B
translation: MGSDAAVPSEVRDWLAATFTQQARAKGRRAEEKPKFRSIVHAVQAGIFVERMFRRTYTAVGPSYSSSVLNCLKGLDQWCFDVFSLHRAAEEHSLRTVVFELFTRHNLNSRFKIPGAFLTALLEALEGGYGKFRNPYHNQVHAADVTQTVHCVLLRTGMLHCLSEIELLAIVFAAAIHDFEHTGTTNSFHIQTKSDTAILYNDRSVLENHHISAVFRLMQDEELNIFVNLTKDEFAELRALVIEMVLATDMSCHFQQVKSMKTALQQLERLDKSKVLSLLLHAADISHPTKQWAVHSRWTKALMEEFFRQGDKEAELGLPFSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLTDVAEKLVTPLAEDGSKAKGNPAATQQPSSQWRQPSLDEHLELGDLKADLAGFRSTWTKHIQENKQKWKERAASGITNQASIDELSPSPGEEPAATGPHSENGDVE
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: join(652506..652657,657551..657617,658169..658285,659455..659595,661034..661134,662121..662246,662334..662435,662531..662651,662724..662805,662893..663019,663105..663241,663881..663978)
location: region:652506-663978:1
so has part: feature:652506-652657:1:exon
so has part: feature:657551-657617:1:exon
so has part: feature:658169-658285:1:exon
so has part: feature:659455-659595:1:exon
so has part: feature:661034-661134:1:exon
so has part: feature:662121-662246:1:exon
so has part: feature:662334-662435:1:exon
so has part: feature:662531-662651:1:exon
so has part: feature:662724-662805:1:exon
so has part: feature:662893-663019:1:exon
so has part: feature:663105-663241:1:exon
so has part: feature:663881-663978:1:exon

XP_021406044.1
type: Protein
SIO_000068: ncbiprotein

position:652506:1
position: 652506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663978:1
position: 663978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652506-652657:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:657551-657617:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:658169-658285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659455-659595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661034-661134:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662121-662246:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:662334-662435:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:662531-662651:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:662724-662805:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:662893-663019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:663105-663241:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:663881-663978:1:exon

PPP1R1A
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PPP1R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(665764..673954)
location: region:665764-673954:-1
so has part: feature:665764-673954:-1:exon
subclass of: SO_0000010

110481651
type: Gene
SIO_000068: ncbigene

position:665764:-1
position: 665764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673954:-1
position: 673954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665764-673954:-1:exon

PPP1R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PPP1R1A
product: protein phosphatase 1 regulatory inhibitor subunit 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021550375.1
SIO_010081: PPP1R1A
subclass of: SO_0000673
so part of: PPP1R1A
location: complement(join(665764..665990,669612..669675,669765..669802,670212..670272,673813..673954))
location: region:665764-673954:-1
so has part: feature:673813-673954:-1:exon
so has part: feature:670212-670272:-1:exon
so has part: feature:669765-669802:-1:exon
so has part: feature:669612-669675:-1:exon
so has part: feature:665764-665990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673813-673954:-1:exon

position:673813:-1
position: 673813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:670212-670272:-1:exon

position:670212:-1
position: 670212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670272:-1
position: 670272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:669765-669802:-1:exon

position:669765:-1
position: 669765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669802:-1
position: 669802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:669612-669675:-1:exon

position:669612:-1
position: 669612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669675:-1
position: 669675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:665764-665990:-1:exon

position:665990:-1
position: 665990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP1R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PPP1R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 1A
translation: MEPNSPRKIQFTVPLLEPHLDPEAAEQIRRRRPTPANLVLSSDQSSPEIDEDRLPNPLLKSGLAMSPRQRKKVARSTPTMKGSWNVPEGGSRILRDPRAGMIRDPRAGMIRDSRAGMIQDSRAGMIRDSRAGMIQDSRAGMIQDSRAGMIRDPRRE
SIO_010081: PPP1R1A
subclass of: SO_0000673
so part of: PPP1R1A
location: complement(join(665764..665990,669612..669675,669765..669802,670212..670272,673813..673893))
location: region:665764-673893:-1
so has part: feature:673813-673893:-1:exon
so has part: feature:670212-670272:-1:exon
so has part: feature:669765-669802:-1:exon
so has part: feature:669612-669675:-1:exon
so has part: feature:665764-665990:-1:exon

XP_021406050.1
type: Protein
SIO_000068: ncbiprotein

position:673893:-1
position: 673893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673813-673893:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670212-670272:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669765-669802:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669612-669675:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:665764-665990:-1:exon

LOC110481650
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110481650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 686736..689434
location: region:686736-689434:1
so has part: feature:686736-689434:1:exon
subclass of: SO_0000010

110481650
type: Gene
SIO_000068: ncbigene

position:686736:1
position: 686736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689434:1
position: 689434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686736-689434:1:exon

LOC110481650
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110481650
product: protein TsetseEP-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021550374.2
SIO_010081: LOC110481650
subclass of: SO_0000673
so part of: LOC110481650
location: join(686736..686807,687034..687640,688240..688484,689071..689196,689324..689434)
location: region:686736-689434:1
so has part: feature:686736-686807:1:exon
so has part: feature:687034-687640:1:exon
so has part: feature:688240-688484:1:exon
so has part: feature:689071-689196:1:exon
so has part: feature:689324-689434:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:686736-686807:1:exon

position:686807:1
position: 686807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:687034-687640:1:exon

position:687034:1
position: 687034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687640:1
position: 687640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:688240-688484:1:exon

position:688240:1
position: 688240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688484:1
position: 688484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:689071-689196:1:exon

position:689071:1
position: 689071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689196:1
position: 689196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:689324-689434:1:exon

position:689324:1
position: 689324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110481650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110481650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein TsetseEP-like
translation: MKLWAALLLAGLVGSLAAALPVEKVDFEGLLKELGKLLDPDEGPQELEEPKEKPQELFWLLDPDEEPQEQPLVSAAEPEDPEESPEEPKESLEESEDPEESEDPTESPEESEDPEESPEESEDPKESPEESEDPKESPEEPEDPEESEDPTESPEESEDPEESPEESEDPKDSPEEPEDPEESEDPKESPEESEDPEESPEESEDPTESPEESEDPEESPEDPEESEDPEESSAESEDPEESPEESEDPEANPEESEDPEESLEESEDPKENPEESEDPEESPEESEIRLDPNVLVELADKLKEAQEGKRNEGVLSLVMDAINWLVTHLSNHIFGCARGLGRPPRGEQ
SIO_010081: LOC110481650
subclass of: SO_0000673
so part of: LOC110481650
location: join(686750..686807,687034..687640,688240..688484,689071..689196,689324..689334)
location: region:686750-689334:1
so has part: feature:686750-686807:1:exon
so has part: feature:687034-687640:1:exon
so has part: feature:688240-688484:1:exon
so has part: feature:689071-689196:1:exon
so has part: feature:689324-689334:1:exon

XP_021406049.1
type: Protein
SIO_000068: ncbiprotein

position:686750:1
position: 686750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689334:1
position: 689334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686750-686807:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687034-687640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:688240-688484:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689071-689196:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689324-689334:1:exon

NEUROD4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: NEUROD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 700121..701080
location: region:700121-701080:1
so has part: feature:700121-701080:1:exon
subclass of: SO_0000010

110481648
type: Gene
SIO_000068: ncbigene

position:700121:1
position: 700121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701080:1
position: 701080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700121-701080:1:exon

NEUROD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NEUROD4
product: neuronal differentiation 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021550373.1
SIO_010081: NEUROD4
subclass of: SO_0000673
so part of: NEUROD4
location: 700121..701080
location: region:700121-701080:1
so has part: feature:700121-701080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:700121-701080:1:exon

NEUROD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NEUROD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurogenic differentiation factor 4
translation: MAELGSGQAWLQEPPAAGAGLKEDNAAAAPFALLPALPEERDSVEEEEEEEEEEDGEKPKRRGPKKKKMTKARLERFRARRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLETGQTPEGKSFVEMLCKGLSQPTSNLVAGCLQLGPQPLFVEKHEEKPCEPALPGHSFGYQGLPSPPYGSMESHLLHLKPPAFKSLVDASFGSHPSECSTPPYEGPLTPPLSISGNFSLKQDGSPELEKPYPFMAHYPSGSLAGGHGHGSHFQSPVPRYEIPLDVAFESFPPHVAGPQLGAIFNE
SIO_010081: NEUROD4
subclass of: SO_0000673
so part of: NEUROD4
location: 700121..701080
location: region:700121-701080:1
so has part: feature:700121-701080:1:exon

XP_021406048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:700121-701080:1:exon

ENDOU
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ENDOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(715048..721227)
location: region:715048-721227:-1
so has part: feature:715048-721227:-1:exon
subclass of: SO_0000010

110481647
type: Gene
SIO_000068: ncbigene

position:715048:-1
position: 715048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721227:-1
position: 721227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715048-721227:-1:exon

ENDOU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ENDOU
product: endonuclease, poly(U) specific
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021550372.1
SIO_010081: ENDOU
subclass of: SO_0000673
so part of: ENDOU
location: complement(join(715048..715162,715684..715826,716623..716729,716807..716920,718043..718242,718326..718497,719366..719401,719543..719704,721071..721227))
location: region:715048-721227:-1
so has part: feature:721071-721227:-1:exon
so has part: feature:719543-719704:-1:exon
so has part: feature:719366-719401:-1:exon
so has part: feature:718326-718497:-1:exon
so has part: feature:718043-718242:-1:exon
so has part: feature:716807-716920:-1:exon
so has part: feature:716623-716729:-1:exon
so has part: feature:715684-715826:-1:exon
so has part: feature:715048-715162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721071-721227:-1:exon

position:721071:-1
position: 721071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:719543-719704:-1:exon

position:719543:-1
position: 719543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719704:-1
position: 719704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:719366-719401:-1:exon

position:719366:-1
position: 719366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719401:-1
position: 719401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:718326-718497:-1:exon

position:718326:-1
position: 718326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718497:-1
position: 718497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:718043-718242:-1:exon

position:718043:-1
position: 718043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718242:-1
position: 718242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:716807-716920:-1:exon

position:716807:-1
position: 716807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716920:-1
position: 716920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:716623-716729:-1:exon

position:716623:-1
position: 716623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716729:-1
position: 716729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:715684-715826:-1:exon

position:715684:-1
position: 715684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715826:-1
position: 715826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:715048-715162:-1:exon

position:715162:-1
position: 715162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ENDOU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ENDOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(U)-specific endoribonuclease
translation: MALSPPGQDVPQQDLPRGHLSAELGEPAVPQPPGDCGSASEGNARSSRAAFAGSPPLCAPTDLYTAPDSCEGRCGEPFSEEDECHCHPECVAHNNCCEDHERHCGPGAEGAEDGARSRAGSSRSSDAITEQELLELSEQLYGLDHNKARPGDIAINPQHLAGPEETGDKQDRSPQPLYKYVNEELFSKPTYASFIKLLDNYQRATGREEEVTAEELQEQERFLEEVMKTELMKKLFVFLQGKNRYGSEQEFLQDLAQMWFGLYSRGDGERDSSGFEHVFSGEVKKGKVSGFHNWIRFYLLEKQGVVNYFSHNFNGPWDSYPDVLGLQFSWDGFYKEVGSAFIGCSPEFEFGLYSLCFLARPGRACHLSLGGHRLSIQTYPWTKSTYGGGRRFIATAYVMST
SIO_010081: ENDOU
subclass of: SO_0000673
so part of: ENDOU
location: complement(join(715048..715162,715684..715826,716623..716729,716807..716920,718043..718242,718326..718497,719366..719401,719543..719704,721071..721227))
location: region:715048-721227:-1
so has part: feature:721071-721227:-1:exon
so has part: feature:719543-719704:-1:exon
so has part: feature:719366-719401:-1:exon
so has part: feature:718326-718497:-1:exon
so has part: feature:718043-718242:-1:exon
so has part: feature:716807-716920:-1:exon
so has part: feature:716623-716729:-1:exon
so has part: feature:715684-715826:-1:exon
so has part: feature:715048-715162:-1:exon

XP_021406047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:721071-721227:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719543-719704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719366-719401:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:718326-718497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:718043-718242:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:716807-716920:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:716623-716729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:715684-715826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:715048-715162:-1:exon

RAPGEF3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: RAPGEF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(726532..741445)
location: region:726532-741445:-1
so has part: feature:726532-741445:-1:exon
subclass of: SO_0000010

110481646
type: Gene
SIO_000068: ncbigene

position:726532:-1
position: 726532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741445:-1
position: 741445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726532-741445:-1:exon

RAPGEF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RAPGEF3
product: Rap guanine nucleotide exchange factor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021550371.1
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: complement(join(726532..726698,727116..727187,727626..727680,727848..727912,727992..728079,728315..728365,728534..728624,728846..729027,729299..729424,729554..729651,729739..729885,729954..730035,730151..730190,730813..730895,730990..731140,731546..731624,732534..732625,732926..733035,733165..733311,734409..734485,734590..734650,734863..734947,735502..735676,735766..735887,735970..736076,736294..736347,741194..741445))
location: region:726532-741445:-1
so has part: feature:741194-741445:-1:exon
so has part: feature:736294-736347:-1:exon
so has part: feature:735970-736076:-1:exon
so has part: feature:735766-735887:-1:exon
so has part: feature:735502-735676:-1:exon
so has part: feature:734863-734947:-1:exon
so has part: feature:734590-734650:-1:exon
so has part: feature:734409-734485:-1:exon
so has part: feature:733165-733311:-1:exon
so has part: feature:732926-733035:-1:exon
so has part: feature:732534-732625:-1:exon
so has part: feature:731546-731624:-1:exon
so has part: feature:730990-731140:-1:exon
so has part: feature:730813-730895:-1:exon
so has part: feature:730151-730190:-1:exon
so has part: feature:729954-730035:-1:exon
so has part: feature:729739-729885:-1:exon
so has part: feature:729554-729651:-1:exon
so has part: feature:729299-729424:-1:exon
so has part: feature:728846-729027:-1:exon
so has part: feature:728534-728624:-1:exon
so has part: feature:728315-728365:-1:exon
so has part: feature:727992-728079:-1:exon
so has part: feature:727848-727912:-1:exon
so has part: feature:727626-727680:-1:exon
so has part: feature:727116-727187:-1:exon
so has part: feature:726532-726698:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:741194-741445:-1:exon

position:741194:-1
position: 741194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:736294-736347:-1:exon

position:736294:-1
position: 736294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736347:-1
position: 736347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:735970-736076:-1:exon

position:735970:-1
position: 735970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736076:-1
position: 736076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:735766-735887:-1:exon

position:735766:-1
position: 735766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735887:-1
position: 735887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:735502-735676:-1:exon

position:735502:-1
position: 735502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735676:-1
position: 735676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:734863-734947:-1:exon

position:734863:-1
position: 734863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734947:-1
position: 734947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:734590-734650:-1:exon

position:734590:-1
position: 734590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734650:-1
position: 734650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:734409-734485:-1:exon

position:734409:-1
position: 734409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734485:-1
position: 734485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:733165-733311:-1:exon

position:733165:-1
position: 733165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733311:-1
position: 733311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:732926-733035:-1:exon

position:732926:-1
position: 732926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733035:-1
position: 733035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:732534-732625:-1:exon

position:732534:-1
position: 732534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732625:-1
position: 732625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:731546-731624:-1:exon

position:731546:-1
position: 731546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731624:-1
position: 731624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:730990-731140:-1:exon

position:730990:-1
position: 730990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731140:-1
position: 731140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:730813-730895:-1:exon

position:730813:-1
position: 730813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730895:-1
position: 730895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:730151-730190:-1:exon

position:730151:-1
position: 730151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730190:-1
position: 730190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:729954-730035:-1:exon

position:729954:-1
position: 729954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730035:-1
position: 730035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:729739-729885:-1:exon

position:729739:-1
position: 729739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729885:-1
position: 729885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:729554-729651:-1:exon

position:729554:-1
position: 729554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729651:-1
position: 729651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:729299-729424:-1:exon

position:729299:-1
position: 729299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729424:-1
position: 729424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:728846-729027:-1:exon

position:728846:-1
position: 728846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729027:-1
position: 729027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:728534-728624:-1:exon

position:728534:-1
position: 728534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728624:-1
position: 728624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:728315-728365:-1:exon

position:728315:-1
position: 728315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728365:-1
position: 728365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:727992-728079:-1:exon

position:727992:-1
position: 727992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728079:-1
position: 728079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:727848-727912:-1:exon

position:727848:-1
position: 727848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727912:-1
position: 727912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:727626-727680:-1:exon

position:727626:-1
position: 727626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727680:-1
position: 727680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:727116-727187:-1:exon

position:727116:-1
position: 727116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727187:-1
position: 727187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:726532-726698:-1:exon

position:726698:-1
position: 726698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAPGEF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RAPGEF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 3
translation: MKVRGAGPGAAAGGARRGAGPGRARPEPGSGAAAAPPQPPGGPGADGARLSGLLRKMHLFRSSSYEVRLEGAGGSLPRIQGIRWTPLLDSESSLDCGHSITQASPERIRRAGKLLLAHLSSSRPGLIRDHKHHLRHHRRCCSGKDLVDWLLGAGAAVQTRGQAVGIGQVLLDGGVLTHVRQEWHFQDKETQFYRFAELELSPEPGAGPRDPEELLEALGFLAQLGPDALLSMALRKPPAQRTQDELELIFEELLHIKAVAHLSNSVKRELAAVLMFEGHQRAGTVLFSQGDKGTSWYIIWKGSVNVVTHGKGLVATLHEGDDFGQLALVNDAPRAATILLREDNCHFLRVDKQDFNRILKDVEANTVRLKEHGKVVLVLQKDLQGGSGQAASARSSSRYLVMAGTPEKILEHLLEFMRLDATLYDPVDTLLGDFLLTYTVFMPTSQLCRALLHHFRAEPLEGSEQDKAAYSLRKRRKILRLVSQWVLLYGRLLQGDRSTTALLQNLADLASRDPQLGGLGQEQGQERRRPRPLENGDGSVSPQPKARSSGMWLGSPEEAIPDSGCALRAQDKVPYEIFRADHSCVAPVLPVNAAVRDVLRALAPRLRRDREHVLVKVNSAGERAVLPQDAVGVFTALGLNERLFVVSTDELGSLTPHPEQLGPHAGSSDTLDLISSKELASHLTDYDWNLFKSIHQVEMIHYIVGPHKSHEVATANLARVMRRFNELQFWVATELCLCPELGRRAQLLRKFIKLAAHLKEQKNLNSFFAVMFGVSNTAVTRLAKTWERLPHKIRKLHSALERMLDPSWNHRVYRLAVAKLSPPIIPFVPLLLKDMTFIHEGNRTLAENLINFEKMHMMAKTVRVLQRCRGHAHAPLSPLRSRSPHRPEDAKAVRISTCSEQSLSARSPVSTWAYLQHLRAIDSQKELLRLSRELEP
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: complement(join(726580..726698,727116..727187,727626..727680,727848..727912,727992..728079,728315..728365,728534..728624,728846..729027,729299..729424,729554..729651,729739..729885,729954..730035,730151..730190,730813..730895,730990..731140,731546..731624,732534..732625,732926..733035,733165..733311,734409..734485,734590..734650,734863..734947,735502..735676,735766..735887,735970..736076,736294..736347,741194..741445))
location: region:726580-741445:-1
so has part: feature:741194-741445:-1:exon
so has part: feature:736294-736347:-1:exon
so has part: feature:735970-736076:-1:exon
so has part: feature:735766-735887:-1:exon
so has part: feature:735502-735676:-1:exon
so has part: feature:734863-734947:-1:exon
so has part: feature:734590-734650:-1:exon
so has part: feature:734409-734485:-1:exon
so has part: feature:733165-733311:-1:exon
so has part: feature:732926-733035:-1:exon
so has part: feature:732534-732625:-1:exon
so has part: feature:731546-731624:-1:exon
so has part: feature:730990-731140:-1:exon
so has part: feature:730813-730895:-1:exon
so has part: feature:730151-730190:-1:exon
so has part: feature:729954-730035:-1:exon
so has part: feature:729739-729885:-1:exon
so has part: feature:729554-729651:-1:exon
so has part: feature:729299-729424:-1:exon
so has part: feature:728846-729027:-1:exon
so has part: feature:728534-728624:-1:exon
so has part: feature:728315-728365:-1:exon
so has part: feature:727992-728079:-1:exon
so has part: feature:727848-727912:-1:exon
so has part: feature:727626-727680:-1:exon
so has part: feature:727116-727187:-1:exon
so has part: feature:726580-726698:-1:exon

XP_021406046.1
type: Protein
SIO_000068: ncbiprotein

position:726580:-1
position: 726580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741194-741445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736294-736347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:735970-736076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735766-735887:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735502-735676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:734863-734947:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:734590-734650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:734409-734485:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:733165-733311:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:732926-733035:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:732534-732625:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:731546-731624:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:730990-731140:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730813-730895:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:730151-730190:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:729954-730035:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:729739-729885:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:729554-729651:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:729299-729424:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:728846-729027:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:728534-728624:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:728315-728365:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:727992-728079:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:727848-727912:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:727626-727680:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:727116-727187:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:726580-726698:-1:exon

SLC48A1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SLC48A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 751845..765686
location: region:751845-765686:1
so has part: feature:751845-765686:1:exon
subclass of: SO_0000010

110481652
type: Gene
SIO_000068: ncbigene

position:751845:1
position: 751845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765686:1
position: 765686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751845-765686:1:exon

SLC48A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC48A1
product: solute carrier family 48 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021550376.2
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: join(751845..752003,757624..757791,758639..758789,765298..765686)
location: region:751845-765686:1
so has part: feature:751845-752003:1:exon
so has part: feature:757624-757791:1:exon
so has part: feature:758639-758789:1:exon
so has part: feature:765298-765686:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:751845-752003:1:exon

position:752003:1
position: 752003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:757624-757791:1:exon

position:757624:1
position: 757624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757791:1
position: 757791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:758639-758789:1:exon

position:758639:1
position: 758639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758789:1
position: 758789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:765298-765686:1:exon

position:765298:1
position: 765298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC48A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC48A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heme transporter HRG1
translation: MALSGALALRVAYASFGALSGLSAFCAWSAVPALRQPGTAAAGGLSGVLALWALITHVMYLQDYWRTWLKGLRFFLSVGILFSALSGLGFCAFLALAITQHQSLTDPKSYYLSCVWSFMALKWALLLSLYSHRYRAEFADISILSDF
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: join(751865..752003,757624..757791,758639..758775)
location: region:751865-758775:1
so has part: feature:751865-752003:1:exon
so has part: feature:757624-757791:1:exon
so has part: feature:758639-758775:1:exon

XP_021406051.1
type: Protein
SIO_000068: ncbiprotein

position:751865:1
position: 751865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758775:1
position: 758775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751865-752003:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:757624-757791:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:758639-758775:1:exon

LOC110481645
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110481645
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 766148..777942
location: region:766148-777942:1
so has part: feature:766148-777942:1:exon
subclass of: SO_0000010

110481645
type: Gene
SIO_000068: ncbigene

position:766148:1
position: 766148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777942:1
position: 777942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766148-777942:1:exon

LOC110481645
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110481645
product: twist-related protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031507201.1
SIO_010081: LOC110481645
subclass of: SO_0000673
so part of: LOC110481645
location: join(766148..766254,766410..767204,777792..777942)
location: region:766148-777942:1
so has part: feature:766148-766254:1:exon
so has part: feature:766410-767204:1:exon
so has part: feature:777792-777942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:766148-766254:1:exon

position:766254:1
position: 766254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:766410-767204:1:exon

position:766410:1
position: 766410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767204:1
position: 767204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:777792-777942:1:exon

position:777792:1
position: 777792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110481645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110481645
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: twist-related protein 2
translation: MDADIPLVASSSGFWEFLTRSLQPQWLHIPIWLPHSRSICAGGLGVAVGRERGNLEPISSRAAGVPLHWSAPGPPPPRSPYQQEPFPKSSQRPPLLAQRRSQGAPWRALRAWGARGAPRANAPGLASGATAGSSAAQRAEEMKEENLSPDSPEGSVATSEDEAERPPRKSGRKRGQGPGGAPSPHGKRSRRSPAPQPPEDAHAQRVIANVRERQRTQSLNDAFAELRKIIPTLPSDKLSKIQTLKLAARYIDFLCQVLQSDELDHKVATSCNFLAHERLSYAFSVWRMEGAWSMSASH
SIO_010081: LOC110481645
subclass of: SO_0000673
so part of: LOC110481645
location: join(766148..766254,766410..767199)
location: region:766148-767199:1
so has part: feature:766148-766254:1:exon
so has part: feature:766410-767199:1:exon

XP_031363061.1
type: Protein
SIO_000068: ncbiprotein

position:767199:1
position: 767199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766148-766254:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:766410-767199:1:exon

HDAC7
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(774520..808608)
location: region:774520-808608:-1
so has part: feature:774520-808608:-1:exon
subclass of: SO_0000010

110478527
type: Gene
SIO_000068: ncbigene

position:774520:-1
position: 774520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808608:-1
position: 808608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774520-808608:-1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HDAC7
product: histone deacetylase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031507202.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: complement(join(774520..774786,775277..775415,776110..776194,776620..776753,777099..777217,777324..777421,779084..779283,780008..780206,780852..780968,781384..781493,781981..782103,783066..783181,783276..783387,784418..784508,785932..786122,808176..808608))
location: region:774520-808608:-1
so has part: feature:808176-808608:-1:exon
so has part: feature:785932-786122:-1:exon
so has part: feature:784418-784508:-1:exon
so has part: feature:783276-783387:-1:exon
so has part: feature:783066-783181:-1:exon
so has part: feature:781981-782103:-1:exon
so has part: feature:781384-781493:-1:exon
so has part: feature:780852-780968:-1:exon
so has part: feature:780008-780206:-1:exon
so has part: feature:779084-779283:-1:exon
so has part: feature:777324-777421:-1:exon
so has part: feature:777099-777217:-1:exon
so has part: feature:776620-776753:-1:exon
so has part: feature:776110-776194:-1:exon
so has part: feature:775277-775415:-1:exon
so has part: feature:774520-774786:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:808176-808608:-1:exon

position:808176:-1
position: 808176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:785932-786122:-1:exon

position:785932:-1
position: 785932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786122:-1
position: 786122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:784418-784508:-1:exon

position:784418:-1
position: 784418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784508:-1
position: 784508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:783276-783387:-1:exon

position:783276:-1
position: 783276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783387:-1
position: 783387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:783066-783181:-1:exon

position:783066:-1
position: 783066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783181:-1
position: 783181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:781981-782103:-1:exon

position:781981:-1
position: 781981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782103:-1
position: 782103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:781384-781493:-1:exon

position:781384:-1
position: 781384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781493:-1
position: 781493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:780852-780968:-1:exon

position:780852:-1
position: 780852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780968:-1
position: 780968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:780008-780206:-1:exon

position:780008:-1
position: 780008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780206:-1
position: 780206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:779084-779283:-1:exon

position:779084:-1
position: 779084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779283:-1
position: 779283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:777324-777421:-1:exon

position:777324:-1
position: 777324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777421:-1
position: 777421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:777099-777217:-1:exon

position:777099:-1
position: 777099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777217:-1
position: 777217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:776620-776753:-1:exon

position:776620:-1
position: 776620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776753:-1
position: 776753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:776110-776194:-1:exon

position:776110:-1
position: 776110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776194:-1
position: 776194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:775277-775415:-1:exon

position:775277:-1
position: 775277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775415:-1
position: 775415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:774520-774786:-1:exon

position:774786:-1
position: 774786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7
translation: MWDAEPRLPGSETRWMFSGLEISTTLVMFSPSSAVSPCTSPRVPQAVPMDLRIGQRVVKPQDSALLALKQQQLQHQLFLASLHQQQVEQLTHQHVRVAMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNAPAAALPYRSLEPLEPEGPSPAMLSTFLSPVPSTALDTPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPDAIDSSPSSSSTPVSGCSSPNDSLPAEHAALPAAPGVAHETPLAQRLMMQESSLAQFALQSAASLPAITLGLPATTGARGDAERRALPGLAHRVPVLNGPVLPGTHSPVFIPAGLEQHEAGSALSPRLQPVIILEPSVTHAPLVAVPGLGTVPLSLAPSLVPAERLALPGQHKPLGRTRSEPLPPSPRAVQQHLLFQQHHAHFLRQQPHLGKVGAGPGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAHEFCPDVVLVSAGFDAAEGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSALLGHEPEPLPEDSLRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEADEVETVTALASLSVAVMVEKRAQEEPMEQEEPMTQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: complement(join(774741..774786,775277..775415,776110..776194,776620..776753,777099..777217,777324..777421,779084..779283,780008..780206,780852..780968,781384..781493,781981..782103,783066..783181,783276..783387,784418..784508,785932..786122,808176..808272))
location: region:774741-808272:-1
so has part: feature:808176-808272:-1:exon
so has part: feature:785932-786122:-1:exon
so has part: feature:784418-784508:-1:exon
so has part: feature:783276-783387:-1:exon
so has part: feature:783066-783181:-1:exon
so has part: feature:781981-782103:-1:exon
so has part: feature:781384-781493:-1:exon
so has part: feature:780852-780968:-1:exon
so has part: feature:780008-780206:-1:exon
so has part: feature:779084-779283:-1:exon
so has part: feature:777324-777421:-1:exon
so has part: feature:777099-777217:-1:exon
so has part: feature:776620-776753:-1:exon
so has part: feature:776110-776194:-1:exon
so has part: feature:775277-775415:-1:exon
so has part: feature:774741-774786:-1:exon

XP_031363062.1
type: Protein
SIO_000068: ncbiprotein

position:774741:-1
position: 774741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808272:-1
position: 808272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808176-808272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:785932-786122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:784418-784508:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:783276-783387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:783066-783181:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:781981-782103:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:781384-781493:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:780852-780968:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:780008-780206:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:779084-779283:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:777324-777421:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:777099-777217:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:776620-776753:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:776110-776194:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:775277-775415:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:774741-774786:-1:exon

LOC110478529
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110478529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 848872..851031
location: region:848872-851031:1
so has part: feature:848872-851031:1:exon
subclass of: SO_0000010

110478529
type: Gene
SIO_000068: ncbigene

position:848872:1
position: 848872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851031:1
position: 851031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:848872-851031:1:exon

LOC110478529
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110478529
product: interferon-induced protein with tetratricopeptide repeats 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021545205.1
SIO_010081: LOC110478529
subclass of: SO_0000673
so part of: LOC110478529
location: join(848872..848894,849720..851031)
location: region:848872-851031:1
so has part: feature:848872-848894:1:exon
so has part: feature:849720-851031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:848872-848894:1:exon

position:848894:1
position: 848894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:849720-851031:1:exon

position:849720:1
position: 849720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110478529
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110478529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein with tetratricopeptide repeats 1-like
translation: MLPAAKLSKKQLKEKLDALQCHFTWMLGVESHSPQHLLQKLDVEIKHTAHQNQLALLGLQAYLHQLNNQSKEALQSLRAAEGHKEEEQLASTAGSLVIYGNYAWVHYLQGSYQEAETCLERVQQLCPTPWDVRLIPHIQAQKGWSLLAIRARNGERARECFNMALMLEPQNRSFRTGLAMALYSSWNSSWQPDTEREVRIQLERIVNEQPDNYKAKIYLARLLEQVDGERSIGLAKECAEKSSDPEVLKLSAFFWMPRSTERALEIIQRALQQEPGYHLLYQALANCYKQQWVKAKEEDKDKIRRKAIKDLQKIVKTHPDLDLTLAKLQLAEFIGAENPAKEKEIYMELERKINTLSLRCRQALSRSWGKYFLYRERSLEKAKAKFMECYNIPLQTDHRQDCGRRLVKMAGIYKSKGNTQAASAIYHFFQEADRHCPRNLLHSV
SIO_010081: LOC110478529
subclass of: SO_0000673
so part of: LOC110478529
location: join(848872..848894,849720..851031)
location: region:848872-851031:1
so has part: feature:848872-848894:1:exon
so has part: feature:849720-851031:1:exon

XP_021400880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:848872-848894:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:849720-851031:1:exon

RACGAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(853031..860983)
location: region:853031-860983:-1
so has part: feature:853031-860983:-1:exon
subclass of: SO_0000010

110478528
type: Gene
SIO_000068: ncbigene

position:853031:-1
position: 853031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860983:-1
position: 860983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853031-860983:-1:exon

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RACGAP1
product: Rac GTPase activating protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 10 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021545204.2
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: complement(join(853031..853374,853663..853771,854005..854140,854223..854355,854607..854712,854969..855167,855361..855456,855836..856000,856432..856562,856720..856837,856936..857013,857718..857771,857985..858054,858256..858392,858729..858931,859412..859500,860925..860983))
location: region:853031-860983:-1
so has part: feature:860925-860983:-1:exon
so has part: feature:859412-859500:-1:exon
so has part: feature:858729-858931:-1:exon
so has part: feature:858256-858392:-1:exon
so has part: feature:857985-858054:-1:exon
so has part: feature:857718-857771:-1:exon
so has part: feature:856936-857013:-1:exon
so has part: feature:856720-856837:-1:exon
so has part: feature:856432-856562:-1:exon
so has part: feature:855836-856000:-1:exon
so has part: feature:855361-855456:-1:exon
so has part: feature:854969-855167:-1:exon
so has part: feature:854607-854712:-1:exon
so has part: feature:854223-854355:-1:exon
so has part: feature:854005-854140:-1:exon
so has part: feature:853663-853771:-1:exon
so has part: feature:853031-853374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:860925-860983:-1:exon

position:860925:-1
position: 860925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:859412-859500:-1:exon

position:859412:-1
position: 859412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859500:-1
position: 859500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:858729-858931:-1:exon

position:858729:-1
position: 858729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858931:-1
position: 858931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:858256-858392:-1:exon

position:858256:-1
position: 858256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858392:-1
position: 858392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:857985-858054:-1:exon

position:857985:-1
position: 857985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858054:-1
position: 858054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:857718-857771:-1:exon

position:857718:-1
position: 857718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857771:-1
position: 857771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:856936-857013:-1:exon

position:856936:-1
position: 856936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857013:-1
position: 857013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:856720-856837:-1:exon

position:856720:-1
position: 856720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856837:-1
position: 856837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:856432-856562:-1:exon

position:856432:-1
position: 856432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856562:-1
position: 856562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:855836-856000:-1:exon

position:855836:-1
position: 855836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856000:-1
position: 856000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:855361-855456:-1:exon

position:855361:-1
position: 855361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855456:-1
position: 855456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:854969-855167:-1:exon

position:854969:-1
position: 854969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855167:-1
position: 855167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:854607-854712:-1:exon

position:854607:-1
position: 854607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854712:-1
position: 854712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:854223-854355:-1:exon

position:854223:-1
position: 854223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854355:-1
position: 854355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:854005-854140:-1:exon

position:854005:-1
position: 854005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854140:-1
position: 854140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:853663-853771:-1:exon

position:853663:-1
position: 853663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853771:-1
position: 853771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:853031-853374:-1:exon

position:853374:-1
position: 853374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RACGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rac GTPase-activating protein 1
translation: MEIAMVNLRGLYEHLTRQAELLSEGNECQFIQLAKNFEENRRKWQKIEEELSRCKDRLMKTEAERSALDVKLKHARNQVDVEIKRRQKAEMDCEKLERQIQLIRELLMCDASGSIQLSEEQKSVLAFLNRPQASVGSAGNKRLSTIDESGSILSDISFDKSDDSLDWDSSVVKAVRLKRREKRRSSRQFAEGPPAPQKKSRSISNTADQANESIVAKTTVMVPNDGGPIEAISTIQTMPYPRRSRRKSGPLQPWNSESSIGSKQLESKLDTDGSSTPQHNGGVRLHDFVSKTVIKPESCVPCGKRVKFGKISLKCRDCRVVAHPECRERCPLPCIPTLTGTPVRIGEGTLMDFVPSTPPMIPSIIVHCVNEIEQRGLHETGIYRISGCDKTVRELKEKFLRAKNIPLLSKVDDIHAICSLLKDFLRSLKEPLLTFRLNKTFMEAAEIPDEDNSIAAMYQAVGELPQANRDTLAFLMVHLQRVAQSPDTKMDISNLAKVFGPTIVAHAVPDPDPMTLLQDTKRQPKVVERLLLLPMDYWSQLMMVEQENIDPAHVIENTNAYSTPRTPEVQVSILGPLTTPEHQLSKTPSSSSLSQRVRSTFSKTTPKFGSKSKSTTQLGHQGNFFASPMLK
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: complement(join(853299..853374,853663..853771,854005..854140,854223..854355,854607..854712,854969..855167,855361..855456,855836..856000,856432..856562,856720..856837,856936..857013,857718..857771,857985..858054,858256..858392,858729..858931,859412..859496))
location: region:853299-859496:-1
so has part: feature:859412-859496:-1:exon
so has part: feature:858729-858931:-1:exon
so has part: feature:858256-858392:-1:exon
so has part: feature:857985-858054:-1:exon
so has part: feature:857718-857771:-1:exon
so has part: feature:856936-857013:-1:exon
so has part: feature:856720-856837:-1:exon
so has part: feature:856432-856562:-1:exon
so has part: feature:855836-856000:-1:exon
so has part: feature:855361-855456:-1:exon
so has part: feature:854969-855167:-1:exon
so has part: feature:854607-854712:-1:exon
so has part: feature:854223-854355:-1:exon
so has part: feature:854005-854140:-1:exon
so has part: feature:853663-853771:-1:exon
so has part: feature:853299-853374:-1:exon

XP_021400879.1
type: Protein
SIO_000068: ncbiprotein

position:853299:-1
position: 853299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859496:-1
position: 859496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:859412-859496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:858729-858931:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:858256-858392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857985-858054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:857718-857771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:856936-857013:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:856720-856837:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:856432-856562:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:855836-856000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:855361-855456:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:854969-855167:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:854607-854712:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:854223-854355:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:854005-854140:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:853663-853771:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:853299-853374:-1:exon

ASIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 874155..893494
location: region:874155-893494:1
so has part: feature:874155-893494:1:exon
subclass of: SO_0000010

110478543
type: Gene
SIO_000068: ncbigene

position:874155:1
position: 874155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893494:1
position: 893494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874155-893494:1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021545233.1
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: join(874155..874476,874591..874665,875092..875486,876295..876490,889120..889270,889751..889878,890069..890219,890300..890356,890440..890593,890675..890766,891017..891096,891190..891294,891521..893494)
location: region:874155-893494:1
so has part: feature:874155-874476:1:exon
so has part: feature:874591-874665:1:exon
so has part: feature:875092-875486:1:exon
so has part: feature:876295-876490:1:exon
so has part: feature:889120-889270:1:exon
so has part: feature:889751-889878:1:exon
so has part: feature:890069-890219:1:exon
so has part: feature:890300-890356:1:exon
so has part: feature:890440-890593:1:exon
so has part: feature:890675-890766:1:exon
so has part: feature:891017-891096:1:exon
so has part: feature:891190-891294:1:exon
so has part: feature:891521-893494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:874155-874476:1:exon

position:874476:1
position: 874476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:874591-874665:1:exon

position:874591:1
position: 874591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874665:1
position: 874665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:875092-875486:1:exon

position:875092:1
position: 875092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875486:1
position: 875486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:876295-876490:1:exon

position:876295:1
position: 876295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876490:1
position: 876490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:889120-889270:1:exon

position:889120:1
position: 889120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889270:1
position: 889270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:889751-889878:1:exon

position:889751:1
position: 889751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889878:1
position: 889878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:890069-890219:1:exon

position:890069:1
position: 890069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890219:1
position: 890219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:890300-890356:1:exon

position:890300:1
position: 890300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890356:1
position: 890356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:890440-890593:1:exon

position:890440:1
position: 890440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890593:1
position: 890593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:890675-890766:1:exon

position:890675:1
position: 890675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890766:1
position: 890766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:891017-891096:1:exon

position:891017:1
position: 891017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891096:1
position: 891096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:891190-891294:1:exon

position:891190:1
position: 891190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891294:1
position: 891294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:891521-893494:1:exon

position:891521:1
position: 891521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021545234.1
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: join(874155..874476,874595..874665,875092..875486,876295..876490,889120..889270,889751..889878,890069..890219,890300..890356,890440..890593,890675..890766,891017..891096,891190..891294,891521..893494)
location: region:874155-893494:1
so has part: feature:874155-874476:1:exon
so has part: feature:874595-874665:1:exon
so has part: feature:875092-875486:1:exon
so has part: feature:876295-876490:1:exon
so has part: feature:889120-889270:1:exon
so has part: feature:889751-889878:1:exon
so has part: feature:890069-890219:1:exon
so has part: feature:890300-890356:1:exon
so has part: feature:890440-890593:1:exon
so has part: feature:890675-890766:1:exon
so has part: feature:891017-891096:1:exon
so has part: feature:891190-891294:1:exon
so has part: feature:891521-893494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:874155-874476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:874595-874665:1:exon

position:874595:1
position: 874595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:875092-875486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876295-876490:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889120-889270:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889751-889878:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890069-890219:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890300-890356:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890440-890593:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890675-890766:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:891017-891096:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:891190-891294:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:891521-893494:1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X2
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGLSHIFSYERLSLKRVVWALCFLGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDIQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCTPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKAVAGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCICEMPCNMTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESIRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: join(875122..875486,876295..876490,889120..889270,889751..889878,890069..890219,890300..890356,890440..890593,890675..890766,891017..891096,891190..891294,891521..891625)
location: region:875122-891625:1
so has part: feature:875122-875486:1:exon
so has part: feature:876295-876490:1:exon
so has part: feature:889120-889270:1:exon
so has part: feature:889751-889878:1:exon
so has part: feature:890069-890219:1:exon
so has part: feature:890300-890356:1:exon
so has part: feature:890440-890593:1:exon
so has part: feature:890675-890766:1:exon
so has part: feature:891017-891096:1:exon
so has part: feature:891190-891294:1:exon
so has part: feature:891521-891625:1:exon

XP_021400908.1
type: Protein
SIO_000068: ncbiprotein

position:875122:1
position: 875122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891625:1
position: 891625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875122-875486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:876295-876490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:889120-889270:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889751-889878:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890069-890219:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890300-890356:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890440-890593:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890675-890766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:891017-891096:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:891190-891294:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:891521-891625:1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X2
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGLSHIFSYERLSLKRVVWALCFLGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDIQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCTPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKAVAGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCICEMPCNMTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESIRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: join(875122..875486,876295..876490,889120..889270,889751..889878,890069..890219,890300..890356,890440..890593,890675..890766,891017..891096,891190..891294,891521..891625)
location: region:875122-891625:1
so has part: feature:875122-875486:1:exon
so has part: feature:876295-876490:1:exon
so has part: feature:889120-889270:1:exon
so has part: feature:889751-889878:1:exon
so has part: feature:890069-890219:1:exon
so has part: feature:890300-890356:1:exon
so has part: feature:890440-890593:1:exon
so has part: feature:890675-890766:1:exon
so has part: feature:891017-891096:1:exon
so has part: feature:891190-891294:1:exon
so has part: feature:891521-891625:1:exon

XP_021400909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:875122-875486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:876295-876490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:889120-889270:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889751-889878:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890069-890219:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890300-890356:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890440-890593:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890675-890766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:891017-891096:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:891190-891294:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:891521-891625:1:exon

LOC116184548
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(882818..885445)
location: region:882818-885445:-1
so has part: feature:882818-885445:-1:exon
subclass of: SO_0000011

116184548
type: Gene
SIO_000068: ncbigene

position:882818:-1
position: 882818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885445:-1
position: 885445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882818-885445:-1:exon

LOC116184548
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184548
product: uncharacterized LOC116184548
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004149301.1
SIO_010081: LOC116184548
subclass of: SO_0000673
so part of: LOC116184548
location: complement(join(882818..883341,885259..885445))
location: region:882818-885445:-1
so has part: feature:885259-885445:-1:exon
so has part: feature:882818-883341:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:885259-885445:-1:exon

position:885259:-1
position: 885259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:882818-883341:-1:exon

position:883341:-1
position: 883341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021545232.1
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: join(887410..888421,889120..889270,889751..889878,890069..890219,890300..890356,890440..890593,890675..890766,891017..891096,891190..891294,891521..893494)
location: region:887410-893494:1
so has part: feature:887410-888421:1:exon
so has part: feature:889120-889270:1:exon
so has part: feature:889751-889878:1:exon
so has part: feature:890069-890219:1:exon
so has part: feature:890300-890356:1:exon
so has part: feature:890440-890593:1:exon
so has part: feature:890675-890766:1:exon
so has part: feature:891017-891096:1:exon
so has part: feature:891190-891294:1:exon
so has part: feature:891521-893494:1:exon

position:887410:1
position: 887410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887410-888421:1:exon

position:888421:1
position: 888421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:889120-889270:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:889751-889878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890069-890219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890300-890356:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890440-890593:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890675-890766:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:891017-891096:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:891190-891294:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:891521-893494:1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X1
translation: MPLQIFCTISFSSEEAPEDAAATAKGEDEADEFLYGQEEDEEDEEDAGAATDFVAFASSCTLHGLSHIFVEGSLGARQALWALAFLLSLSVFLYQVADRIAYYLEYHHVTLLSEEDSPEMTFPAVTFCNINRVRLSQLSHEDLLYLAPLVDYEPGMELGFTPAQPGPWEEDEPLNLYGFFNRTCHQLEDMLLSCSYRGQRCGPGDFAPVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKAVAGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCICEMPCNMTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESIRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: join(887798..888421,889120..889270,889751..889878,890069..890219,890300..890356,890440..890593,890675..890766,891017..891096,891190..891294,891521..891625)
location: region:887798-891625:1
so has part: feature:887798-888421:1:exon
so has part: feature:889120-889270:1:exon
so has part: feature:889751-889878:1:exon
so has part: feature:890069-890219:1:exon
so has part: feature:890300-890356:1:exon
so has part: feature:890440-890593:1:exon
so has part: feature:890675-890766:1:exon
so has part: feature:891017-891096:1:exon
so has part: feature:891190-891294:1:exon
so has part: feature:891521-891625:1:exon

XP_021400907.1
type: Protein
SIO_000068: ncbiprotein

position:887798:1
position: 887798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887798-888421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:889120-889270:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:889751-889878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890069-890219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890300-890356:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890440-890593:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890675-890766:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:891017-891096:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:891190-891294:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:891521-891625:1:exon

SMARCD1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 896884..903917
location: region:896884-903917:1
so has part: feature:896884-903917:1:exon
subclass of: SO_0000010

110478541
type: Gene
SIO_000068: ncbigene

position:896884:1
position: 896884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903917:1
position: 903917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896884-903917:1:exon

SMARCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SMARCD1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 14 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021545229.2
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: join(896884..897048,897123..897310,898098..898140,898225..898347,898967..899089,899574..899690,900011..900112,900393..900554,900666..900763,901181..901316,901634..901756,901982..902083,902278..903917)
location: region:896884-903917:1
so has part: feature:896884-897048:1:exon
so has part: feature:897123-897310:1:exon
so has part: feature:898098-898140:1:exon
so has part: feature:898225-898347:1:exon
so has part: feature:898967-899089:1:exon
so has part: feature:899574-899690:1:exon
so has part: feature:900011-900112:1:exon
so has part: feature:900393-900554:1:exon
so has part: feature:900666-900763:1:exon
so has part: feature:901181-901316:1:exon
so has part: feature:901634-901756:1:exon
so has part: feature:901982-902083:1:exon
so has part: feature:902278-903917:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896884-897048:1:exon

position:897048:1
position: 897048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:897123-897310:1:exon

position:897123:1
position: 897123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897310:1
position: 897310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:898098-898140:1:exon

position:898098:1
position: 898098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898140:1
position: 898140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:898225-898347:1:exon

position:898225:1
position: 898225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898347:1
position: 898347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:898967-899089:1:exon

position:898967:1
position: 898967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899089:1
position: 899089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:899574-899690:1:exon

position:899574:1
position: 899574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899690:1
position: 899690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:900011-900112:1:exon

position:900011:1
position: 900011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900112:1
position: 900112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:900393-900554:1:exon

position:900393:1
position: 900393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900554:1
position: 900554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:900666-900763:1:exon

position:900666:1
position: 900666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900763:1
position: 900763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:901181-901316:1:exon

position:901181:1
position: 901181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901316:1
position: 901316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:901634-901756:1:exon

position:901634:1
position: 901634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901756:1
position: 901756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:901982-902083:1:exon

position:901982:1
position: 901982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902083:1
position: 902083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:902278-903917:1:exon

position:902278:1
position: 902278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMARCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
translation: MAARAGFQSGPASGGGAGAAPGAALGPGAPGGAVRMGPAPGQGLYRSPLPGAAYPRPGMLPGGRLAPQGPAMGPPGYGGSPAVRPALAQAGLDQARKRPAPQQLQQVQPQAVPNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: join(896884..897048,897123..897310,898098..898140,898225..898347,898967..899089,899574..899690,900011..900112,900393..900554,900666..900763,901181..901316,901634..901756,901982..902083,902278..902331)
location: region:896884-902331:1
so has part: feature:896884-897048:1:exon
so has part: feature:897123-897310:1:exon
so has part: feature:898098-898140:1:exon
so has part: feature:898225-898347:1:exon
so has part: feature:898967-899089:1:exon
so has part: feature:899574-899690:1:exon
so has part: feature:900011-900112:1:exon
so has part: feature:900393-900554:1:exon
so has part: feature:900666-900763:1:exon
so has part: feature:901181-901316:1:exon
so has part: feature:901634-901756:1:exon
so has part: feature:901982-902083:1:exon
so has part: feature:902278-902331:1:exon

XP_021400904.1
type: Protein
SIO_000068: ncbiprotein

position:902331:1
position: 902331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896884-897048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:897123-897310:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:898098-898140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898225-898347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:898967-899089:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:899574-899690:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:900011-900112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:900393-900554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:900666-900763:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:901181-901316:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:901634-901756:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:901982-902083:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:902278-902331:1:exon

GPD1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: GPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 905078..910363
location: region:905078-910363:1
so has part: feature:905078-910363:1:exon
subclass of: SO_0000010

110478542
type: Gene
SIO_000068: ncbigene

position:905078:1
position: 905078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910363:1
position: 910363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905078-910363:1:exon

GPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GPD1
product: glycerol-3-phosphate dehydrogenase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021545230.1
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: join(905078..905127,905282..905459,905837..905977,906396..906534,907421..907533,907707..907940,908359..908465,908671..910363)
location: region:905078-910363:1
so has part: feature:905078-905127:1:exon
so has part: feature:905282-905459:1:exon
so has part: feature:905837-905977:1:exon
so has part: feature:906396-906534:1:exon
so has part: feature:907421-907533:1:exon
so has part: feature:907707-907940:1:exon
so has part: feature:908359-908465:1:exon
so has part: feature:908671-910363:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:905078-905127:1:exon

position:905127:1
position: 905127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:905282-905459:1:exon

position:905282:1
position: 905282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905459:1
position: 905459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:905837-905977:1:exon

position:905837:1
position: 905837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905977:1
position: 905977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:906396-906534:1:exon

position:906396:1
position: 906396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906534:1
position: 906534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:907421-907533:1:exon

position:907421:1
position: 907421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907533:1
position: 907533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:907707-907940:1:exon

position:907707:1
position: 907707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907940:1
position: 907940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:908359-908465:1:exon

position:908359:1
position: 908359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908465:1
position: 908465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:908671-910363:1:exon

position:908671:1
position: 908671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GPD1
product: glycerol-3-phosphate dehydrogenase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021545231.1
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: join(905078..905127,905282..905459,905837..905977,906396..906534,907421..907533,907707..907940,908671..910363)
location: region:905078-910363:1
so has part: feature:905078-905127:1:exon
so has part: feature:905282-905459:1:exon
so has part: feature:905837-905977:1:exon
so has part: feature:906396-906534:1:exon
so has part: feature:907421-907533:1:exon
so has part: feature:907707-907940:1:exon
so has part: feature:908671-910363:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:905078-905127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:905282-905459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:905837-905977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:906396-906534:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:907421-907533:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:907707-907940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:908671-910363:1:exon

GPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: GPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic isoform X1
translation: MGGKKVCIVGSGNWGSAIAKIAGSNTARLSSFESQVNMWVLEEEVGGRRLTDIINTEHENVKYLPGHKLPPNVVAEPDLLKACAGADVLLFVVPHQFIGKVCDQLKGHVKKEAIGMSLIKGVDEGPDGLRLISDIIHEKLGIEMNVLMGANIASEVAEEKFCETTIGCKNMKHGQMLKDLMQTPNFRVSVVQEADTVEICGALKNVVAVGAGFCDGLGYGDNTKAAVIRLGLMEMIGFAKLFCKGPVTSSTFLESCGVADLITTCYGGRNRKVAEAFAKTGKSIEQLEKEMLNGQKLQGPQTSAELHRILKSKNAVEKFPLFTAVYRVCYEGKPVTDFITCLQNHPEHM
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: join(905087..905127,905282..905459,905837..905977,906396..906534,907421..907533,907707..907940,908359..908465,908671..908767)
location: region:905087-908767:1
so has part: feature:905087-905127:1:exon
so has part: feature:905282-905459:1:exon
so has part: feature:905837-905977:1:exon
so has part: feature:906396-906534:1:exon
so has part: feature:907421-907533:1:exon
so has part: feature:907707-907940:1:exon
so has part: feature:908359-908465:1:exon
so has part: feature:908671-908767:1:exon

XP_021400905.1
type: Protein
SIO_000068: ncbiprotein

position:905087:1
position: 905087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908767:1
position: 908767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905087-905127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:905282-905459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:905837-905977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:906396-906534:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:907421-907533:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:907707-907940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:908359-908465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:908671-908767:1:exon

GPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: GPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic isoform X2
translation: MGGKKVCIVGSGNWGSAIAKIAGSNTARLSSFESQVNMWVLEEEVGGRRLTDIINTEHENVKYLPGHKLPPNVVAEPDLLKACAGADVLLFVVPHQFIGKVCDQLKGHVKKEAIGMSLIKGVDEGPDGLRLISDIIHEKLGIEMNVLMGANIASEVAEEKFCETTIGCKNMKHGQMLKDLMQTPNFRVSVVQEADTVEICGALKNVVAVGAGFCDGLGYGDNTKAAVIRLGLMEMIGFAKLFCKGPVTSSTFLESCGVADLITTCYGGRNRKVAEAFAKTGKVPPLHCCVSGLLRGKTCH
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: join(905087..905127,905282..905459,905837..905977,906396..906534,907421..907533,907707..907940,908671..908727)
location: region:905087-908727:1
so has part: feature:905087-905127:1:exon
so has part: feature:905282-905459:1:exon
so has part: feature:905837-905977:1:exon
so has part: feature:906396-906534:1:exon
so has part: feature:907421-907533:1:exon
so has part: feature:907707-907940:1:exon
so has part: feature:908671-908727:1:exon

XP_021400906.1
type: Protein
SIO_000068: ncbiprotein

position:908727:1
position: 908727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905087-905127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:905282-905459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:905837-905977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:906396-906534:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:907421-907533:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:907707-907940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:908671-908727:1:exon

LOC110478540
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110478540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 911797..914225
location: region:911797-914225:1
so has part: feature:911797-914225:1:exon
subclass of: SO_0000010

110478540
type: Gene
SIO_000068: ncbigene

position:911797:1
position: 911797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914225:1
position: 914225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:911797-914225:1:exon

LOC110478540
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110478540
product: cytochrome c oxidase assembly protein COX14 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_021545228.2
SIO_010081: LOC110478540
subclass of: SO_0000673
so part of: LOC110478540
location: join(911797..911876,913689..914225)
location: region:911797-914225:1
so has part: feature:911797-911876:1:exon
so has part: feature:913689-914225:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:911797-911876:1:exon

position:911876:1
position: 911876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:913689-914225:1:exon

position:913689:1
position: 913689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110478540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110478540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly protein COX14 homolog
translation: MVSKKQLADFGYKAFSGSMMLLTVYAGYLCSVRVQRMLQHRRQRENVPGPES
SIO_010081: LOC110478540
subclass of: SO_0000673
so part of: LOC110478540
location: 913697..913855
location: region:913697-913855:1
so has part: feature:913697-913855:1:exon

XP_021400903.1
type: Protein
SIO_000068: ncbiprotein

position:913697:1
position: 913697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913855:1
position: 913855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913697-913855:1:exon

CERS5
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(914461..932372)
location: region:914461-932372:-1
so has part: feature:914461-932372:-1:exon
subclass of: SO_0000010

110478539
type: Gene
SIO_000068: ncbigene

position:914461:-1
position: 914461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932372:-1
position: 932372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914461-932372:-1:exon

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CERS5
product: ceramide synthase 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021545226.1
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: complement(join(914461..915986,918630..918786,921071..921177,921753..921881,923128..923220,923768..923818,924334..924391,925220..925350,927257..927362,932113..932372))
location: region:914461-932372:-1
so has part: feature:932113-932372:-1:exon
so has part: feature:927257-927362:-1:exon
so has part: feature:925220-925350:-1:exon
so has part: feature:924334-924391:-1:exon
so has part: feature:923768-923818:-1:exon
so has part: feature:923128-923220:-1:exon
so has part: feature:921753-921881:-1:exon
so has part: feature:921071-921177:-1:exon
so has part: feature:918630-918786:-1:exon
so has part: feature:914461-915986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:932113-932372:-1:exon

position:932113:-1
position: 932113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:927257-927362:-1:exon

position:927257:-1
position: 927257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927362:-1
position: 927362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:925220-925350:-1:exon

position:925220:-1
position: 925220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925350:-1
position: 925350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:924334-924391:-1:exon

position:924334:-1
position: 924334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:924391:-1
position: 924391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:923768-923818:-1:exon

position:923768:-1
position: 923768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923818:-1
position: 923818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:923128-923220:-1:exon

position:923128:-1
position: 923128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923220:-1
position: 923220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:921753-921881:-1:exon

position:921753:-1
position: 921753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921881:-1
position: 921881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:921071-921177:-1:exon

position:921071:-1
position: 921071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921177:-1
position: 921177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:918630-918786:-1:exon

position:918630:-1
position: 918630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918786:-1
position: 918786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:914461-915986:-1:exon

position:915986:-1
position: 915986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CERS5
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 299123
gene: CERS5
product: ceramide synthase 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002466771.1
SIO_010081: CERS5
so part of: CERS5
location: complement(join(914461..915986,917588..917685,918630..918786,921071..921177,921753..921881,923128..923220,923768..923818,924334..924391,925220..925350,927257..927362,932113..932372))
location: region:914461-932372:-1
so has part: feature:932113-932372:-1:exon
so has part: feature:927257-927362:-1:exon
so has part: feature:925220-925350:-1:exon
so has part: feature:924334-924391:-1:exon
so has part: feature:923768-923818:-1:exon
so has part: feature:923128-923220:-1:exon
so has part: feature:921753-921881:-1:exon
so has part: feature:921071-921177:-1:exon
so has part: feature:918630-918786:-1:exon
so has part: feature:917588-917685:-1:exon
so has part: feature:914461-915986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:932113-932372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927257-927362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:925220-925350:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:924334-924391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:923768-923818:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:923128-923220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:921753-921881:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:921071-921177:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:918630-918786:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:917588-917685:-1:exon

position:917588:-1
position: 917588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917685:-1
position: 917685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:914461-915986:-1:exon

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5
translation: MAAAAAAALRAWFWNERFWLPHNVTWADLAGEPGPPGSGLQYPRAAHVLSAFPLALGIFAVRLLFERFIAKPCAINLGIQDSGPHRAQPNAILEKVFTSITKSPDGKRLEGLSKQLDWDVRKIQRWFRHRRNQDKPTTLTKFCESMWRFTFYFSIFFYGIRFLWTAPWFWDTRQCWYNYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQVLHVIWSYLIIRTASKALVRGKVSKDDRSDVESSSEEEDVTSNSTKGIFSTSSNGSNRLNGHMAGGQWTGEE
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: complement(join(915834..915986,918630..918786,921071..921177,921753..921881,923128..923220,923768..923818,924334..924391,925220..925350,927257..927362,932113..932312))
location: region:915834-932312:-1
so has part: feature:932113-932312:-1:exon
so has part: feature:927257-927362:-1:exon
so has part: feature:925220-925350:-1:exon
so has part: feature:924334-924391:-1:exon
so has part: feature:923768-923818:-1:exon
so has part: feature:923128-923220:-1:exon
so has part: feature:921753-921881:-1:exon
so has part: feature:921071-921177:-1:exon
so has part: feature:918630-918786:-1:exon
so has part: feature:915834-915986:-1:exon

XP_021400901.1
type: Protein
SIO_000068: ncbiprotein

position:915834:-1
position: 915834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932312:-1
position: 932312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932113-932312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927257-927362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:925220-925350:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:924334-924391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:923768-923818:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:923128-923220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:921753-921881:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:921071-921177:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:918630-918786:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:915834-915986:-1:exon

LOC110478538
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110478538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(933024..934221)
location: region:933024-934221:-1
so has part: feature:933024-934221:-1:exon
subclass of: SO_0000011

110478538
type: Gene
SIO_000068: ncbigene

position:933024:-1
position: 933024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934221:-1
position: 934221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933024-934221:-1:exon

LOC110478538
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110478538
product: uncharacterized LOC110478538
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_002466770.2
SIO_010081: LOC110478538
subclass of: SO_0000673
so part of: LOC110478538
location: complement(join(933024..933293,934033..934221))
location: region:933024-934221:-1
so has part: feature:934033-934221:-1:exon
so has part: feature:933024-933293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934033-934221:-1:exon

position:934033:-1
position: 934033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933024-933293:-1:exon

position:933293:-1
position: 933293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LIMA1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(935114..957823)
location: region:935114-957823:-1
so has part: feature:935114-957823:-1:exon
subclass of: SO_0000010

110478537
type: Gene
SIO_000068: ncbigene

position:935114:-1
position: 935114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957823:-1
position: 957823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:935114-957823:-1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021545224.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: complement(join(935114..937282,937652..937785,940634..940746,941020..941077,942850..942954,945184..945344,946104..946209,950368..950745,952621..952666,954538..954673,957710..957823))
location: region:935114-957823:-1
so has part: feature:957710-957823:-1:exon
so has part: feature:954538-954673:-1:exon
so has part: feature:952621-952666:-1:exon
so has part: feature:950368-950745:-1:exon
so has part: feature:946104-946209:-1:exon
so has part: feature:945184-945344:-1:exon
so has part: feature:942850-942954:-1:exon
so has part: feature:941020-941077:-1:exon
so has part: feature:940634-940746:-1:exon
so has part: feature:937652-937785:-1:exon
so has part: feature:935114-937282:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957710-957823:-1:exon

position:957710:-1
position: 957710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:954538-954673:-1:exon

position:954538:-1
position: 954538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954673:-1
position: 954673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:952621-952666:-1:exon

position:952621:-1
position: 952621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952666:-1
position: 952666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:950368-950745:-1:exon

position:950368:-1
position: 950368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950745:-1
position: 950745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:946104-946209:-1:exon

position:946104:-1
position: 946104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946209:-1
position: 946209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:945184-945344:-1:exon

position:945184:-1
position: 945184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945344:-1
position: 945344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:942850-942954:-1:exon

position:942850:-1
position: 942850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942954:-1
position: 942954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:941020-941077:-1:exon

position:941020:-1
position: 941020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941077:-1
position: 941077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:940634-940746:-1:exon

position:940634:-1
position: 940634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940746:-1
position: 940746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:937652-937785:-1:exon

position:937652:-1
position: 937652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937785:-1
position: 937785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:935114-937282:-1:exon

position:937282:-1
position: 937282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021545225.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: complement(join(935114..937282,937652..937785,940634..940746,941020..941077,945184..945344,946104..946212,950368..950745,952621..952666,954538..954673,957710..957823))
location: region:935114-957823:-1
so has part: feature:957710-957823:-1:exon
so has part: feature:954538-954673:-1:exon
so has part: feature:952621-952666:-1:exon
so has part: feature:950368-950745:-1:exon
so has part: feature:946104-946212:-1:exon
so has part: feature:945184-945344:-1:exon
so has part: feature:941020-941077:-1:exon
so has part: feature:940634-940746:-1:exon
so has part: feature:937652-937785:-1:exon
so has part: feature:935114-937282:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957710-957823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954538-954673:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:952621-952666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:950368-950745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:946104-946212:-1:exon

position:946212:-1
position: 946212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:945184-945344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:941020-941077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:940634-940746:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:937652-937785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:935114-937282:-1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021545223.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: complement(join(935114..937282,937652..937785,940634..940746,941020..941077,942850..942954,945184..945344,946104..946212,950368..950745,952621..952666,954538..954673,957710..957823))
location: region:935114-957823:-1
so has part: feature:957710-957823:-1:exon
so has part: feature:954538-954673:-1:exon
so has part: feature:952621-952666:-1:exon
so has part: feature:950368-950745:-1:exon
so has part: feature:946104-946212:-1:exon
so has part: feature:945184-945344:-1:exon
so has part: feature:942850-942954:-1:exon
so has part: feature:941020-941077:-1:exon
so has part: feature:940634-940746:-1:exon
so has part: feature:937652-937785:-1:exon
so has part: feature:935114-937282:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957710-957823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954538-954673:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:952621-952666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:950368-950745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:946104-946212:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:945184-945344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:942850-942954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:941020-941077:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:940634-940746:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:937652-937785:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:935114-937282:-1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X2
translation: MEPSPFNRRQWTSQSLKITAKELSLVNRSKSSALAERFSKYQKAAEEAAAEKKRSNAENLPAHLTRGNLSLLKKKWENPAAAGVTVRSGCAEVRHKVGTPSPSAGAGAAPGHPQGPAGDSAEPHGRCREGGSMENCGGEPRGVEKPEASERSESPGRIEKYNVPLSKLKMMFEKGEAPQSKGPREPRRAAVGRRISEHSLSLEDWDSAQERSHSTAGYLVESSPGLSPDKAELRKNLDMPRLSETSIKDRLAKYQAAVSKQGTSSGIIPMSEIQASESELKNYKSGQKENMAPVEDSSSWQDGEKVSVGENSLSLHSGLLEDGHGGQSEMEAEAQKSVSSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKTECEESPEKTVPGVNSPETPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIQGSALDEGIKVLKPKWPPEEEISKPEVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTISVKGHKTENSPSPSKEERDTLRRSEELEREVVMEKKQKEKKVEHRNILNAGEKNVEEEQELCGIKTAEHNVVENGQMNADTDEEEHATEEPEIPKEELLEPNSPKHSSLANAVTAKESSPNQNRKSQDVGFWEGEDMEDLSVEEQIKRNRCYEDDDE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: complement(join(936283..937282,937652..937785,940634..940746,941020..941077,942850..942954,945184..945344,946104..946209,950368..950745,952621..952666,954538..954656))
location: region:936283-954656:-1
so has part: feature:954538-954656:-1:exon
so has part: feature:952621-952666:-1:exon
so has part: feature:950368-950745:-1:exon
so has part: feature:946104-946209:-1:exon
so has part: feature:945184-945344:-1:exon
so has part: feature:942850-942954:-1:exon
so has part: feature:941020-941077:-1:exon
so has part: feature:940634-940746:-1:exon
so has part: feature:937652-937785:-1:exon
so has part: feature:936283-937282:-1:exon

XP_021400899.1
type: Protein
SIO_000068: ncbiprotein

position:936283:-1
position: 936283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954656:-1
position: 954656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:954538-954656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952621-952666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950368-950745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:946104-946209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:945184-945344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:942850-942954:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:941020-941077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:940634-940746:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:937652-937785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:936283-937282:-1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X3
translation: MEPSPFNRRQWTSQSLKITAKELSLVNRSKSSALAERFSKYQKAAEEAAAEKKRSNAENLPAHLTRGNLSLLKKKWENPAAAGVTVRSGCAEVRHKVGTPSPSAGAGAAPGHPQGPAGDSAEPHGRCREGGSMENCGGEPRGVEKPEASERSESPGRIEKYNVPLSKLKMMFEKGEAPQSKQGPREPRRAAVGRRISEHSLSLEDWDSAQERSHSTAGYLVESSPGLSPDKAELRKNLDMPRLSETSIKDRLAKYQAAVSKQGTSSGIIPMVSVGENSLSLHSGLLEDGHGGQSEMEAEAQKSVSSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKTECEESPEKTVPGVNSPETPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIQGSALDEGIKVLKPKWPPEEEISKPEVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTISVKGHKTENSPSPSKEERDTLRRSEELEREVVMEKKQKEKKVEHRNILNAGEKNVEEEQELCGIKTAEHNVVENGQMNADTDEEEHATEEPEIPKEELLEPNSPKHSSLANAVTAKESSPNQNRKSQDVGFWEGEDMEDLSVEEQIKRNRCYEDDDE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: complement(join(936283..937282,937652..937785,940634..940746,941020..941077,945184..945344,946104..946212,950368..950745,952621..952666,954538..954656))
location: region:936283-954656:-1
so has part: feature:954538-954656:-1:exon
so has part: feature:952621-952666:-1:exon
so has part: feature:950368-950745:-1:exon
so has part: feature:946104-946212:-1:exon
so has part: feature:945184-945344:-1:exon
so has part: feature:941020-941077:-1:exon
so has part: feature:940634-940746:-1:exon
so has part: feature:937652-937785:-1:exon
so has part: feature:936283-937282:-1:exon

XP_021400900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:954538-954656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952621-952666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950368-950745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:946104-946212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:945184-945344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:941020-941077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:940634-940746:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:937652-937785:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:936283-937282:-1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MEPSPFNRRQWTSQSLKITAKELSLVNRSKSSALAERFSKYQKAAEEAAAEKKRSNAENLPAHLTRGNLSLLKKKWENPAAAGVTVRSGCAEVRHKVGTPSPSAGAGAAPGHPQGPAGDSAEPHGRCREGGSMENCGGEPRGVEKPEASERSESPGRIEKYNVPLSKLKMMFEKGEAPQSKQGPREPRRAAVGRRISEHSLSLEDWDSAQERSHSTAGYLVESSPGLSPDKAELRKNLDMPRLSETSIKDRLAKYQAAVSKQGTSSGIIPMSEIQASESELKNYKSGQKENMAPVEDSSSWQDGEKVSVGENSLSLHSGLLEDGHGGQSEMEAEAQKSVSSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKTECEESPEKTVPGVNSPETPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIQGSALDEGIKVLKPKWPPEEEISKPEVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTISVKGHKTENSPSPSKEERDTLRRSEELEREVVMEKKQKEKKVEHRNILNAGEKNVEEEQELCGIKTAEHNVVENGQMNADTDEEEHATEEPEIPKEELLEPNSPKHSSLANAVTAKESSPNQNRKSQDVGFWEGEDMEDLSVEEQIKRNRCYEDDDE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: complement(join(936283..937282,937652..937785,940634..940746,941020..941077,942850..942954,945184..945344,946104..946212,950368..950745,952621..952666,954538..954656))
location: region:936283-954656:-1
so has part: feature:954538-954656:-1:exon
so has part: feature:952621-952666:-1:exon
so has part: feature:950368-950745:-1:exon
so has part: feature:946104-946212:-1:exon
so has part: feature:945184-945344:-1:exon
so has part: feature:942850-942954:-1:exon
so has part: feature:941020-941077:-1:exon
so has part: feature:940634-940746:-1:exon
so has part: feature:937652-937785:-1:exon
so has part: feature:936283-937282:-1:exon

XP_021400898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:954538-954656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952621-952666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950368-950745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:946104-946212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:945184-945344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:942850-942954:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:941020-941077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:940634-940746:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:937652-937785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:936283-937282:-1:exon

LARP4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 967571..985639
location: region:967571-985639:1
so has part: feature:967571-985639:1:exon
subclass of: SO_0000010

110478536
type: Gene
SIO_000068: ncbigene

position:967571:1
position: 967571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985639:1
position: 985639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967571-985639:1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031507196.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(967571..967683,972482..972656,972857..973004,974098..974256,974569..974644,975142..975278,975504..975607,976562..976672,977024..977077,977681..977890,978328..978431,982007..982231,982897..982945,983145..983303,983822..983940,984724..984892,985027..985374,985509..985639)
location: region:967571-985639:1
so has part: feature:967571-967683:1:exon
so has part: feature:972482-972656:1:exon
so has part: feature:972857-973004:1:exon
so has part: feature:974098-974256:1:exon
so has part: feature:974569-974644:1:exon
so has part: feature:975142-975278:1:exon
so has part: feature:975504-975607:1:exon
so has part: feature:976562-976672:1:exon
so has part: feature:977024-977077:1:exon
so has part: feature:977681-977890:1:exon
so has part: feature:978328-978431:1:exon
so has part: feature:982007-982231:1:exon
so has part: feature:982897-982945:1:exon
so has part: feature:983145-983303:1:exon
so has part: feature:983822-983940:1:exon
so has part: feature:984724-984892:1:exon
so has part: feature:985027-985374:1:exon
so has part: feature:985509-985639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:967571-967683:1:exon

position:967683:1
position: 967683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972482-972656:1:exon

position:972482:1
position: 972482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972656:1
position: 972656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:972857-973004:1:exon

position:972857:1
position: 972857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973004:1
position: 973004
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:974098-974256:1:exon

position:974098:1
position: 974098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974256:1
position: 974256
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:974569-974644:1:exon

position:974569:1
position: 974569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974644:1
position: 974644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:975142-975278:1:exon

position:975142:1
position: 975142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975278:1
position: 975278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:975504-975607:1:exon

position:975504:1
position: 975504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975607:1
position: 975607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:976562-976672:1:exon

position:976562:1
position: 976562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976672:1
position: 976672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:977024-977077:1:exon

position:977024:1
position: 977024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977077:1
position: 977077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:977681-977890:1:exon

position:977681:1
position: 977681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977890:1
position: 977890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:978328-978431:1:exon

position:978328:1
position: 978328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978431:1
position: 978431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:982007-982231:1:exon

position:982007:1
position: 982007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982231:1
position: 982231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:982897-982945:1:exon

position:982897:1
position: 982897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982945:1
position: 982945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:983145-983303:1:exon

position:983145:1
position: 983145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983303:1
position: 983303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:983822-983940:1:exon

position:983822:1
position: 983822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983940:1
position: 983940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:984724-984892:1:exon

position:984724:1
position: 984724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984892:1
position: 984892
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:985027-985374:1:exon

position:985027:1
position: 985027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985374:1
position: 985374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:985509-985639:1:exon

position:985509:1
position: 985509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021545218.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(967571..967683,972482..972656,972857..973004,974098..974256,974569..974644,975142..975278,975504..975607,976562..976672,977024..977077,977681..977890,978328..978431,982007..982231,982897..982945,983145..983303,983822..983940,984724..984892,985027..985368,985521..985639)
location: region:967571-985639:1
so has part: feature:967571-967683:1:exon
so has part: feature:972482-972656:1:exon
so has part: feature:972857-973004:1:exon
so has part: feature:974098-974256:1:exon
so has part: feature:974569-974644:1:exon
so has part: feature:975142-975278:1:exon
so has part: feature:975504-975607:1:exon
so has part: feature:976562-976672:1:exon
so has part: feature:977024-977077:1:exon
so has part: feature:977681-977890:1:exon
so has part: feature:978328-978431:1:exon
so has part: feature:982007-982231:1:exon
so has part: feature:982897-982945:1:exon
so has part: feature:983145-983303:1:exon
so has part: feature:983822-983940:1:exon
so has part: feature:984724-984892:1:exon
so has part: feature:985027-985368:1:exon
so has part: feature:985521-985639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:967571-967683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972482-972656:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:972857-973004:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:974098-974256:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:974569-974644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:975142-975278:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:975504-975607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:976562-976672:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:977024-977077:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:977681-977890:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:978328-978431:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:982007-982231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:982897-982945:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:983145-983303:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:983822-983940:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:984724-984892:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:985027-985368:1:exon

position:985368:1
position: 985368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:985521-985639:1:exon

position:985521:1
position: 985521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021545221.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(967571..967683,972482..972656,972857..973004,974098..974256,974569..974644,975142..975278,975504..975607,976562..976672,977024..977077,977681..977890,978328..978431,982007..982231,982897..982945,983145..983303,983822..983940,984724..984892,985027..985350,985521..985639)
location: region:967571-985639:1
so has part: feature:967571-967683:1:exon
so has part: feature:972482-972656:1:exon
so has part: feature:972857-973004:1:exon
so has part: feature:974098-974256:1:exon
so has part: feature:974569-974644:1:exon
so has part: feature:975142-975278:1:exon
so has part: feature:975504-975607:1:exon
so has part: feature:976562-976672:1:exon
so has part: feature:977024-977077:1:exon
so has part: feature:977681-977890:1:exon
so has part: feature:978328-978431:1:exon
so has part: feature:982007-982231:1:exon
so has part: feature:982897-982945:1:exon
so has part: feature:983145-983303:1:exon
so has part: feature:983822-983940:1:exon
so has part: feature:984724-984892:1:exon
so has part: feature:985027-985350:1:exon
so has part: feature:985521-985639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:967571-967683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972482-972656:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:972857-973004:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:974098-974256:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:974569-974644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:975142-975278:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:975504-975607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:976562-976672:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:977024-977077:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:977681-977890:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:978328-978431:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:982007-982231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:982897-982945:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:983145-983303:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:983822-983940:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:984724-984892:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:985027-985350:1:exon

position:985350:1
position: 985350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:985521-985639:1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031507197.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(967571..967683,972482..972656,972860..973004,974098..974256,974569..974644,975142..975278,975504..975607,976562..976672,977024..977077,977681..977890,978328..978431,982007..982231,982897..982945,983145..983303,983822..983940,984724..984892,985027..985374,985509..985639)
location: region:967571-985639:1
so has part: feature:967571-967683:1:exon
so has part: feature:972482-972656:1:exon
so has part: feature:972860-973004:1:exon
so has part: feature:974098-974256:1:exon
so has part: feature:974569-974644:1:exon
so has part: feature:975142-975278:1:exon
so has part: feature:975504-975607:1:exon
so has part: feature:976562-976672:1:exon
so has part: feature:977024-977077:1:exon
so has part: feature:977681-977890:1:exon
so has part: feature:978328-978431:1:exon
so has part: feature:982007-982231:1:exon
so has part: feature:982897-982945:1:exon
so has part: feature:983145-983303:1:exon
so has part: feature:983822-983940:1:exon
so has part: feature:984724-984892:1:exon
so has part: feature:985027-985374:1:exon
so has part: feature:985509-985639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:967571-967683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972482-972656:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:972860-973004:1:exon

position:972860:1
position: 972860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:974098-974256:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:974569-974644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:975142-975278:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:975504-975607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:976562-976672:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:977024-977077:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:977681-977890:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:978328-978431:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:982007-982231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:982897-982945:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:983145-983303:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:983822-983940:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:984724-984892:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:985027-985374:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:985509-985639:1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031507198.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(967577..967683,972857..973004,974098..974256,974569..974644,975142..975278,975504..975607,976562..976672,977024..977077,977681..977890,978328..978431,982007..982231,982897..982945,983145..983303,983822..983940,984724..984892,985027..985374,985509..985639)
location: region:967577-985639:1
so has part: feature:967577-967683:1:exon
so has part: feature:972857-973004:1:exon
so has part: feature:974098-974256:1:exon
so has part: feature:974569-974644:1:exon
so has part: feature:975142-975278:1:exon
so has part: feature:975504-975607:1:exon
so has part: feature:976562-976672:1:exon
so has part: feature:977024-977077:1:exon
so has part: feature:977681-977890:1:exon
so has part: feature:978328-978431:1:exon
so has part: feature:982007-982231:1:exon
so has part: feature:982897-982945:1:exon
so has part: feature:983145-983303:1:exon
so has part: feature:983822-983940:1:exon
so has part: feature:984724-984892:1:exon
so has part: feature:985027-985374:1:exon
so has part: feature:985509-985639:1:exon

position:967577:1
position: 967577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967577-967683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972857-973004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:974098-974256:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:974569-974644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:975142-975278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:975504-975607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976562-976672:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:977024-977077:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:977681-977890:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:978328-978431:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:982007-982231:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:982897-982945:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:983145-983303:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:983822-983940:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:984724-984892:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:985027-985374:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:985509-985639:1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X4
translation: MLLFVEQVTSKGAGLNPNAKVWQEVPQGSAEAVPPTNGTEHTWQETAAAQGTPAEGNIEISEDSCKQYEVMYSPACEAPRNGTGVDEASANGIVLATEDLGYQIYEVSGDGSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSSSSEHPEGPPGAGALPMGDLGRTSSRNFVMERHSSSLTGHQEQGYAQKDSPAAQLEQNGDFGVGRGRRNVFRGRRRREDDRVSRPQPSAETKTQTPKFDLLASNFPPLPGSTAKILGEPVLESRMSDIVKGVCKEKESKDSLCPCPAPAPEEQTPSAAQPVPSVSSLNQAEPVLLSTVQPESKPEEVSAPKDVASPASPPASVCPISAAKPARTNTSSPSAQASAAPALSTQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKNEDNGTAEKAPEKAPHERPEARMKDYPGFRGPGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQHVGKEQHVGKEQXVGKEQYVGKEQYVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(967666..967683,972857..973004,974098..974256,974569..974644,975142..975278,975504..975607,976562..976672,977024..977077,977681..977890,978328..978431,982007..982231,982897..982945,983145..983303,983822..983940,984724..984892,985027..985374,985509..985589)
location: region:967666-985589:1
so has part: feature:967666-967683:1:exon
so has part: feature:972857-973004:1:exon
so has part: feature:974098-974256:1:exon
so has part: feature:974569-974644:1:exon
so has part: feature:975142-975278:1:exon
so has part: feature:975504-975607:1:exon
so has part: feature:976562-976672:1:exon
so has part: feature:977024-977077:1:exon
so has part: feature:977681-977890:1:exon
so has part: feature:978328-978431:1:exon
so has part: feature:982007-982231:1:exon
so has part: feature:982897-982945:1:exon
so has part: feature:983145-983303:1:exon
so has part: feature:983822-983940:1:exon
so has part: feature:984724-984892:1:exon
so has part: feature:985027-985374:1:exon
so has part: feature:985509-985589:1:exon

XP_031363058.1
type: Protein
SIO_000068: ncbiprotein

position:967666:1
position: 967666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985589:1
position: 985589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967666-967683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972857-973004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:974098-974256:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:974569-974644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:975142-975278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:975504-975607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976562-976672:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:977024-977077:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:977681-977890:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:978328-978431:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:982007-982231:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:982897-982945:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:983145-983303:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:983822-983940:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:984724-984892:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:985027-985374:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:985509-985589:1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X1
translation: MLSDVNKERLKATLLMEQVTSKGAGLNPNAKVWQEVPQGSAEAVPPTNGTEHTWQETAAAQGTPAEGNIEISEDSCKQYEVMYSPACEAPRNGTGVDEASANGIVLATEDLGYQIYEVSGDGSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSSSSEHPEGPPGAGALPMGDLGRTSSRNFVMERHSSSLTGHQEQGYAQKDSPAAQLEQNGDFGVGRGRRNVFRGRRRREDDRVSRPQPSAETKTQTPKFDLLASNFPPLPGSTAKILGEPVLESRMSDIVKGVCKEKESKDSLCPCPAPAPEEQTPSAAQPVPSVSSLNQAEPVLLSTVQPESKPEEVSAPKDVASPASPPASVCPISAAKPARTNTSSPSAQASAAPALSTQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKNEDNGTAEKAPEKAPHERPEARMKDYPGFRGPGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQHVGKEQHVGKEQXVGKEQYVGKEQYVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(972606..972656,972857..973004,974098..974256,974569..974644,975142..975278,975504..975607,976562..976672,977024..977077,977681..977890,978328..978431,982007..982231,982897..982945,983145..983303,983822..983940,984724..984892,985027..985374,985509..985589)
location: region:972606-985589:1
so has part: feature:972606-972656:1:exon
so has part: feature:972857-973004:1:exon
so has part: feature:974098-974256:1:exon
so has part: feature:974569-974644:1:exon
so has part: feature:975142-975278:1:exon
so has part: feature:975504-975607:1:exon
so has part: feature:976562-976672:1:exon
so has part: feature:977024-977077:1:exon
so has part: feature:977681-977890:1:exon
so has part: feature:978328-978431:1:exon
so has part: feature:982007-982231:1:exon
so has part: feature:982897-982945:1:exon
so has part: feature:983145-983303:1:exon
so has part: feature:983822-983940:1:exon
so has part: feature:984724-984892:1:exon
so has part: feature:985027-985374:1:exon
so has part: feature:985509-985589:1:exon

XP_031363056.1
type: Protein
SIO_000068: ncbiprotein

position:972606:1
position: 972606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972606-972656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972857-973004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:974098-974256:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:974569-974644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:975142-975278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:975504-975607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976562-976672:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:977024-977077:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:977681-977890:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:978328-978431:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:982007-982231:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:982897-982945:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:983145-983303:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:983822-983940:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:984724-984892:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:985027-985374:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:985509-985589:1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X3
translation: MLSDVNKERLKATLLMEQVTSKGAGLNPNAKVWQEVPQGSAEAVPPTNGTEHTWQETAAAQGTPAEGNIEISEDSCKQYEVMYSPACEAPRNGTGVDEASANGIVLATEDLGYQIYEVSGDGSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSSSSEHPEGPPGAGALPMGDLGRTSSRNFVMERHSSSLTGHQEQGYAQKDSPAAQLEQNGDFGVGRGRRNVFRGRRRREDDRVSRPQPSAETKTQTPKFDLLASNFPPLPGSTAKILGEPVLESRMSDIVKGVCKEKESKDSLCPCPAPAPEEQTPSAAQPVPSVSSLNQAEPVLLSTVQPESKPEEVSAPKDVASPASPPASVCPISAAKPARTNTSSPSAQASAAPALSTQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKNEDNGTAEKAPEKAPHERPEARMKDYPGFRGPGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQHVGKEQHVGKEQYVGKEQYVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(972606..972656,972857..973004,974098..974256,974569..974644,975142..975278,975504..975607,976562..976672,977024..977077,977681..977890,978328..978431,982007..982231,982897..982945,983145..983303,983822..983940,984724..984892,985027..985368,985521..985589)
location: region:972606-985589:1
so has part: feature:972606-972656:1:exon
so has part: feature:972857-973004:1:exon
so has part: feature:974098-974256:1:exon
so has part: feature:974569-974644:1:exon
so has part: feature:975142-975278:1:exon
so has part: feature:975504-975607:1:exon
so has part: feature:976562-976672:1:exon
so has part: feature:977024-977077:1:exon
so has part: feature:977681-977890:1:exon
so has part: feature:978328-978431:1:exon
so has part: feature:982007-982231:1:exon
so has part: feature:982897-982945:1:exon
so has part: feature:983145-983303:1:exon
so has part: feature:983822-983940:1:exon
so has part: feature:984724-984892:1:exon
so has part: feature:985027-985368:1:exon
so has part: feature:985521-985589:1:exon

XP_021400893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:972606-972656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972857-973004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:974098-974256:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:974569-974644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:975142-975278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:975504-975607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976562-976672:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:977024-977077:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:977681-977890:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:978328-978431:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:982007-982231:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:982897-982945:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:983145-983303:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:983822-983940:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:984724-984892:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:985027-985368:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:985521-985589:1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X5
translation: MLSDVNKERLKATLLMEQVTSKGAGLNPNAKVWQEVPQGSAEAVPPTNGTEHTWQETAAAQGTPAEGNIEISEDSCKQYEVMYSPACEAPRNGTGVDEASANGIVLATEDLGYQIYEVSGDGSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSSSSEHPEGPPGAGALPMGDLGRTSSRNFVMERHSSSLTGHQEQGYAQKDSPAAQLEQNGDFGVGRGRRNVFRGRRRREDDRVSRPQPSAETKTQTPKFDLLASNFPPLPGSTAKILGEPVLESRMSDIVKGVCKEKESKDSLCPCPAPAPEEQTPSAAQPVPSVSSLNQAEPVLLSTVQPESKPEEVSAPKDVASPASPPASVCPISAAKPARTNTSSPSAQASAAPALSTQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKNEDNGTAEKAPEKAPHERPEARMKDYPGFRGPGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQHVGKEQYVGKEQYVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(972606..972656,972857..973004,974098..974256,974569..974644,975142..975278,975504..975607,976562..976672,977024..977077,977681..977890,978328..978431,982007..982231,982897..982945,983145..983303,983822..983940,984724..984892,985027..985350,985521..985589)
location: region:972606-985589:1
so has part: feature:972606-972656:1:exon
so has part: feature:972857-973004:1:exon
so has part: feature:974098-974256:1:exon
so has part: feature:974569-974644:1:exon
so has part: feature:975142-975278:1:exon
so has part: feature:975504-975607:1:exon
so has part: feature:976562-976672:1:exon
so has part: feature:977024-977077:1:exon
so has part: feature:977681-977890:1:exon
so has part: feature:978328-978431:1:exon
so has part: feature:982007-982231:1:exon
so has part: feature:982897-982945:1:exon
so has part: feature:983145-983303:1:exon
so has part: feature:983822-983940:1:exon
so has part: feature:984724-984892:1:exon
so has part: feature:985027-985350:1:exon
so has part: feature:985521-985589:1:exon

XP_021400896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:972606-972656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972857-973004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:974098-974256:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:974569-974644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:975142-975278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:975504-975607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976562-976672:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:977024-977077:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:977681-977890:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:978328-978431:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:982007-982231:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:982897-982945:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:983145-983303:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:983822-983940:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:984724-984892:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:985027-985350:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:985521-985589:1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X2
translation: MLSDVNKERLKATLLMEVTSKGAGLNPNAKVWQEVPQGSAEAVPPTNGTEHTWQETAAAQGTPAEGNIEISEDSCKQYEVMYSPACEAPRNGTGVDEASANGIVLATEDLGYQIYEVSGDGSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSSSSEHPEGPPGAGALPMGDLGRTSSRNFVMERHSSSLTGHQEQGYAQKDSPAAQLEQNGDFGVGRGRRNVFRGRRRREDDRVSRPQPSAETKTQTPKFDLLASNFPPLPGSTAKILGEPVLESRMSDIVKGVCKEKESKDSLCPCPAPAPEEQTPSAAQPVPSVSSLNQAEPVLLSTVQPESKPEEVSAPKDVASPASPPASVCPISAAKPARTNTSSPSAQASAAPALSTQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKNEDNGTAEKAPEKAPHERPEARMKDYPGFRGPGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQHVGKEQHVGKEQXVGKEQYVGKEQYVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: join(972606..972656,972860..973004,974098..974256,974569..974644,975142..975278,975504..975607,976562..976672,977024..977077,977681..977890,978328..978431,982007..982231,982897..982945,983145..983303,983822..983940,984724..984892,985027..985374,985509..985589)
location: region:972606-985589:1
so has part: feature:972606-972656:1:exon
so has part: feature:972860-973004:1:exon
so has part: feature:974098-974256:1:exon
so has part: feature:974569-974644:1:exon
so has part: feature:975142-975278:1:exon
so has part: feature:975504-975607:1:exon
so has part: feature:976562-976672:1:exon
so has part: feature:977024-977077:1:exon
so has part: feature:977681-977890:1:exon
so has part: feature:978328-978431:1:exon
so has part: feature:982007-982231:1:exon
so has part: feature:982897-982945:1:exon
so has part: feature:983145-983303:1:exon
so has part: feature:983822-983940:1:exon
so has part: feature:984724-984892:1:exon
so has part: feature:985027-985374:1:exon
so has part: feature:985509-985589:1:exon

XP_031363057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:972606-972656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972860-973004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:974098-974256:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:974569-974644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:975142-975278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:975504-975607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976562-976672:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:977024-977077:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:977681-977890:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:978328-978431:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:982007-982231:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:982897-982945:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:983145-983303:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:983822-983940:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:984724-984892:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:985027-985374:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:985509-985589:1:exon

DIP2B
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 992473..1059648
location: region:992473-1059648:1
so has part: feature:992473-1059648:1:exon
subclass of: SO_0000010

110478533
type: Gene
SIO_000068: ncbigene

position:992473:1
position: 992473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059648:1
position: 1059648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992473-1059648:1:exon

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021545214.2
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: join(992473..992568,1020047..1020118,1024398..1024544,1024798..1024923,1027626..1027838,1030098..1030241,1031387..1031506,1032665..1032862,1033769..1033860,1034235..1034345,1035534..1035657,1036157..1036266,1037252..1037354,1038298..1038362,1038877..1038970,1039687..1039806,1040211..1040325,1040874..1041013,1041218..1041354,1041646..1041726,1041842..1041969,1042691..1042805,1043758..1043959,1044280..1044389,1044494..1044574,1045125..1045248,1045594..1045715,1046680..1046791,1047228..1047337,1048638..1048768,1049423..1049591,1050540..1050710,1051724..1051785,1051915..1051972,1052460..1052534,1053648..1053825,1055416..1055539,1056213..1059648)
location: region:992473-1059648:1
so has part: feature:992473-992568:1:exon
so has part: feature:1020047-1020118:1:exon
so has part: feature:1024398-1024544:1:exon
so has part: feature:1024798-1024923:1:exon
so has part: feature:1027626-1027838:1:exon
so has part: feature:1030098-1030241:1:exon
so has part: feature:1031387-1031506:1:exon
so has part: feature:1032665-1032862:1:exon
so has part: feature:1033769-1033860:1:exon
so has part: feature:1034235-1034345:1:exon
so has part: feature:1035534-1035657:1:exon
so has part: feature:1036157-1036266:1:exon
so has part: feature:1037252-1037354:1:exon
so has part: feature:1038298-1038362:1:exon
so has part: feature:1038877-1038970:1:exon
so has part: feature:1039687-1039806:1:exon
so has part: feature:1040211-1040325:1:exon
so has part: feature:1040874-1041013:1:exon
so has part: feature:1041218-1041354:1:exon
so has part: feature:1041646-1041726:1:exon
so has part: feature:1041842-1041969:1:exon
so has part: feature:1042691-1042805:1:exon
so has part: feature:1043758-1043959:1:exon
so has part: feature:1044280-1044389:1:exon
so has part: feature:1044494-1044574:1:exon
so has part: feature:1045125-1045248:1:exon
so has part: feature:1045594-1045715:1:exon
so has part: feature:1046680-1046791:1:exon
so has part: feature:1047228-1047337:1:exon
so has part: feature:1048638-1048768:1:exon
so has part: feature:1049423-1049591:1:exon
so has part: feature:1050540-1050710:1:exon
so has part: feature:1051724-1051785:1:exon
so has part: feature:1051915-1051972:1:exon
so has part: feature:1052460-1052534:1:exon
so has part: feature:1053648-1053825:1:exon
so has part: feature:1055416-1055539:1:exon
so has part: feature:1056213-1059648:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:992473-992568:1:exon

position:992568:1
position: 992568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1020047-1020118:1:exon

position:1020047:1
position: 1020047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020118:1
position: 1020118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1024398-1024544:1:exon

position:1024398:1
position: 1024398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024544:1
position: 1024544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1024798-1024923:1:exon

position:1024798:1
position: 1024798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024923:1
position: 1024923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1027626-1027838:1:exon

position:1027626:1
position: 1027626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027838:1
position: 1027838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1030098-1030241:1:exon

position:1030098:1
position: 1030098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030241:1
position: 1030241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1031387-1031506:1:exon

position:1031387:1
position: 1031387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031506:1
position: 1031506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1032665-1032862:1:exon

position:1032665:1
position: 1032665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032862:1
position: 1032862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1033769-1033860:1:exon

position:1033769:1
position: 1033769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033860:1
position: 1033860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1034235-1034345:1:exon

position:1034235:1
position: 1034235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034345:1
position: 1034345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1035534-1035657:1:exon

position:1035534:1
position: 1035534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035657:1
position: 1035657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1036157-1036266:1:exon

position:1036157:1
position: 1036157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036266:1
position: 1036266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1037252-1037354:1:exon

position:1037252:1
position: 1037252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037354:1
position: 1037354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1038298-1038362:1:exon

position:1038298:1
position: 1038298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038362:1
position: 1038362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1038877-1038970:1:exon

position:1038877:1
position: 1038877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038970:1
position: 1038970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1039687-1039806:1:exon

position:1039687:1
position: 1039687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039806:1
position: 1039806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1040211-1040325:1:exon

position:1040211:1
position: 1040211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040325:1
position: 1040325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1040874-1041013:1:exon

position:1040874:1
position: 1040874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041013:1
position: 1041013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1041218-1041354:1:exon

position:1041218:1
position: 1041218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041354:1
position: 1041354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1041646-1041726:1:exon

position:1041646:1
position: 1041646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041726:1
position: 1041726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1041842-1041969:1:exon

position:1041842:1
position: 1041842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041969:1
position: 1041969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1042691-1042805:1:exon

position:1042691:1
position: 1042691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042805:1
position: 1042805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1043758-1043959:1:exon

position:1043758:1
position: 1043758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043959:1
position: 1043959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1044280-1044389:1:exon

position:1044280:1
position: 1044280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044389:1
position: 1044389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1044494-1044574:1:exon

position:1044494:1
position: 1044494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044574:1
position: 1044574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1045125-1045248:1:exon

position:1045125:1
position: 1045125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045248:1
position: 1045248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1045594-1045715:1:exon

position:1045594:1
position: 1045594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045715:1
position: 1045715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1046680-1046791:1:exon

position:1046680:1
position: 1046680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046791:1
position: 1046791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1047228-1047337:1:exon

position:1047228:1
position: 1047228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047337:1
position: 1047337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1048638-1048768:1:exon

position:1048638:1
position: 1048638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1048768:1
position: 1048768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1049423-1049591:1:exon

position:1049423:1
position: 1049423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049591:1
position: 1049591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1050540-1050710:1:exon

position:1050540:1
position: 1050540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050710:1
position: 1050710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1051724-1051785:1:exon

position:1051724:1
position: 1051724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051785:1
position: 1051785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1051915-1051972:1:exon

position:1051915:1
position: 1051915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051972:1
position: 1051972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1052460-1052534:1:exon

position:1052460:1
position: 1052460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052534:1
position: 1052534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1053648-1053825:1:exon

position:1053648:1
position: 1053648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1053825:1
position: 1053825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1055416-1055539:1:exon

position:1055416:1
position: 1055416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055539:1
position: 1055539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1056213-1059648:1:exon

position:1056213:1
position: 1056213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021545215.2
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: join(992473..992568,1020047..1020118,1024398..1024544,1024798..1024923,1030098..1030241,1031387..1031506,1032665..1032862,1033769..1033860,1034235..1034345,1035534..1035657,1036157..1036266,1037252..1037354,1038298..1038362,1038877..1038970,1039687..1039806,1040211..1040325,1040874..1041013,1041218..1041354,1041646..1041726,1041842..1041969,1042691..1042805,1043758..1043959,1044280..1044389,1044494..1044574,1045125..1045248,1045594..1045715,1046680..1046791,1047228..1047337,1048638..1048768,1049423..1049591,1050540..1050710,1051724..1051785,1051915..1051972,1052460..1052534,1053648..1053825,1055416..1055539,1056213..1059648)
location: region:992473-1059648:1
so has part: feature:992473-992568:1:exon
so has part: feature:1020047-1020118:1:exon
so has part: feature:1024398-1024544:1:exon
so has part: feature:1024798-1024923:1:exon
so has part: feature:1030098-1030241:1:exon
so has part: feature:1031387-1031506:1:exon
so has part: feature:1032665-1032862:1:exon
so has part: feature:1033769-1033860:1:exon
so has part: feature:1034235-1034345:1:exon
so has part: feature:1035534-1035657:1:exon
so has part: feature:1036157-1036266:1:exon
so has part: feature:1037252-1037354:1:exon
so has part: feature:1038298-1038362:1:exon
so has part: feature:1038877-1038970:1:exon
so has part: feature:1039687-1039806:1:exon
so has part: feature:1040211-1040325:1:exon
so has part: feature:1040874-1041013:1:exon
so has part: feature:1041218-1041354:1:exon
so has part: feature:1041646-1041726:1:exon
so has part: feature:1041842-1041969:1:exon
so has part: feature:1042691-1042805:1:exon
so has part: feature:1043758-1043959:1:exon
so has part: feature:1044280-1044389:1:exon
so has part: feature:1044494-1044574:1:exon
so has part: feature:1045125-1045248:1:exon
so has part: feature:1045594-1045715:1:exon
so has part: feature:1046680-1046791:1:exon
so has part: feature:1047228-1047337:1:exon
so has part: feature:1048638-1048768:1:exon
so has part: feature:1049423-1049591:1:exon
so has part: feature:1050540-1050710:1:exon
so has part: feature:1051724-1051785:1:exon
so has part: feature:1051915-1051972:1:exon
so has part: feature:1052460-1052534:1:exon
so has part: feature:1053648-1053825:1:exon
so has part: feature:1055416-1055539:1:exon
so has part: feature:1056213-1059648:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:992473-992568:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020047-1020118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1024398-1024544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024798-1024923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1030098-1030241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1031387-1031506:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1032665-1032862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1033769-1033860:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034235-1034345:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1035534-1035657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1036157-1036266:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1037252-1037354:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1038298-1038362:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1038877-1038970:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1039687-1039806:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1040211-1040325:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1040874-1041013:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1041218-1041354:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1041646-1041726:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1041842-1041969:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1042691-1042805:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1043758-1043959:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1044280-1044389:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1044494-1044574:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1045125-1045248:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1045594-1045715:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1046680-1046791:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1047228-1047337:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1048638-1048768:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1049423-1049591:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1050540-1050710:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1051724-1051785:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1051915-1051972:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1052460-1052534:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1053648-1053825:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1055416-1055539:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1056213-1059648:1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X1
translation: MAEPAAVSSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGVDPALQKESRPQMPVPSSAPAPAASSSSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALHQSLQNAESWINRSVQGSSTSSSASSTLSHGEGKGTSGSLADVFANTRIESFSVPPDVTATTSTPSARPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRVAMLAHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTVAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRAGGMMYYGLAGVTKNTFEVIPVNSSGSPVGEVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAQATPDHPLFLLLNAKGTTVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYSGCVPVTVRPPHAQSLVATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAGAVDVKTWPTIIDTDDLPRKRLAQIYKPPTPEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLFLWLSTVSQYKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: join(992487..992568,1020047..1020118,1024398..1024544,1024798..1024923,1027626..1027838,1030098..1030241,1031387..1031506,1032665..1032862,1033769..1033860,1034235..1034345,1035534..1035657,1036157..1036266,1037252..1037354,1038298..1038362,1038877..1038970,1039687..1039806,1040211..1040325,1040874..1041013,1041218..1041354,1041646..1041726,1041842..1041969,1042691..1042805,1043758..1043959,1044280..1044389,1044494..1044574,1045125..1045248,1045594..1045715,1046680..1046791,1047228..1047337,1048638..1048768,1049423..1049591,1050540..1050710,1051724..1051785,1051915..1051972,1052460..1052534,1053648..1053825,1055416..1055539,1056213..1056465)
location: region:992487-1056465:1
so has part: feature:992487-992568:1:exon
so has part: feature:1020047-1020118:1:exon
so has part: feature:1024398-1024544:1:exon
so has part: feature:1024798-1024923:1:exon
so has part: feature:1027626-1027838:1:exon
so has part: feature:1030098-1030241:1:exon
so has part: feature:1031387-1031506:1:exon
so has part: feature:1032665-1032862:1:exon
so has part: feature:1033769-1033860:1:exon
so has part: feature:1034235-1034345:1:exon
so has part: feature:1035534-1035657:1:exon
so has part: feature:1036157-1036266:1:exon
so has part: feature:1037252-1037354:1:exon
so has part: feature:1038298-1038362:1:exon
so has part: feature:1038877-1038970:1:exon
so has part: feature:1039687-1039806:1:exon
so has part: feature:1040211-1040325:1:exon
so has part: feature:1040874-1041013:1:exon
so has part: feature:1041218-1041354:1:exon
so has part: feature:1041646-1041726:1:exon
so has part: feature:1041842-1041969:1:exon
so has part: feature:1042691-1042805:1:exon
so has part: feature:1043758-1043959:1:exon
so has part: feature:1044280-1044389:1:exon
so has part: feature:1044494-1044574:1:exon
so has part: feature:1045125-1045248:1:exon
so has part: feature:1045594-1045715:1:exon
so has part: feature:1046680-1046791:1:exon
so has part: feature:1047228-1047337:1:exon
so has part: feature:1048638-1048768:1:exon
so has part: feature:1049423-1049591:1:exon
so has part: feature:1050540-1050710:1:exon
so has part: feature:1051724-1051785:1:exon
so has part: feature:1051915-1051972:1:exon
so has part: feature:1052460-1052534:1:exon
so has part: feature:1053648-1053825:1:exon
so has part: feature:1055416-1055539:1:exon
so has part: feature:1056213-1056465:1:exon

XP_021400889.1
type: Protein
SIO_000068: ncbiprotein

position:992487:1
position: 992487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056465:1
position: 1056465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992487-992568:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020047-1020118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1024398-1024544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024798-1024923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1027626-1027838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1030098-1030241:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1031387-1031506:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1032665-1032862:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1033769-1033860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1034235-1034345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1035534-1035657:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1036157-1036266:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1037252-1037354:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1038298-1038362:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1038877-1038970:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1039687-1039806:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1040211-1040325:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1040874-1041013:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1041218-1041354:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1041646-1041726:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1041842-1041969:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1042691-1042805:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1043758-1043959:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1044280-1044389:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1044494-1044574:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1045125-1045248:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1045594-1045715:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1046680-1046791:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1047228-1047337:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1048638-1048768:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1049423-1049591:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1050540-1050710:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1051724-1051785:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1051915-1051972:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1052460-1052534:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1053648-1053825:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1055416-1055539:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1056213-1056465:1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X2
translation: MAEPAAVSSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGVDPALQKESRPQMPVPSSAPAPAASSSSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPESFSVPPDVTATTSTPSARPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRVAMLAHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTVAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRAGGMMYYGLAGVTKNTFEVIPVNSSGSPVGEVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAQATPDHPLFLLLNAKGTTVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYSGCVPVTVRPPHAQSLVATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAGAVDVKTWPTIIDTDDLPRKRLAQIYKPPTPEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLFLWLSTVSQYKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: join(992487..992568,1020047..1020118,1024398..1024544,1024798..1024923,1030098..1030241,1031387..1031506,1032665..1032862,1033769..1033860,1034235..1034345,1035534..1035657,1036157..1036266,1037252..1037354,1038298..1038362,1038877..1038970,1039687..1039806,1040211..1040325,1040874..1041013,1041218..1041354,1041646..1041726,1041842..1041969,1042691..1042805,1043758..1043959,1044280..1044389,1044494..1044574,1045125..1045248,1045594..1045715,1046680..1046791,1047228..1047337,1048638..1048768,1049423..1049591,1050540..1050710,1051724..1051785,1051915..1051972,1052460..1052534,1053648..1053825,1055416..1055539,1056213..1056465)
location: region:992487-1056465:1
so has part: feature:992487-992568:1:exon
so has part: feature:1020047-1020118:1:exon
so has part: feature:1024398-1024544:1:exon
so has part: feature:1024798-1024923:1:exon
so has part: feature:1030098-1030241:1:exon
so has part: feature:1031387-1031506:1:exon
so has part: feature:1032665-1032862:1:exon
so has part: feature:1033769-1033860:1:exon
so has part: feature:1034235-1034345:1:exon
so has part: feature:1035534-1035657:1:exon
so has part: feature:1036157-1036266:1:exon
so has part: feature:1037252-1037354:1:exon
so has part: feature:1038298-1038362:1:exon
so has part: feature:1038877-1038970:1:exon
so has part: feature:1039687-1039806:1:exon
so has part: feature:1040211-1040325:1:exon
so has part: feature:1040874-1041013:1:exon
so has part: feature:1041218-1041354:1:exon
so has part: feature:1041646-1041726:1:exon
so has part: feature:1041842-1041969:1:exon
so has part: feature:1042691-1042805:1:exon
so has part: feature:1043758-1043959:1:exon
so has part: feature:1044280-1044389:1:exon
so has part: feature:1044494-1044574:1:exon
so has part: feature:1045125-1045248:1:exon
so has part: feature:1045594-1045715:1:exon
so has part: feature:1046680-1046791:1:exon
so has part: feature:1047228-1047337:1:exon
so has part: feature:1048638-1048768:1:exon
so has part: feature:1049423-1049591:1:exon
so has part: feature:1050540-1050710:1:exon
so has part: feature:1051724-1051785:1:exon
so has part: feature:1051915-1051972:1:exon
so has part: feature:1052460-1052534:1:exon
so has part: feature:1053648-1053825:1:exon
so has part: feature:1055416-1055539:1:exon
so has part: feature:1056213-1056465:1:exon

XP_021400890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:992487-992568:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020047-1020118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1024398-1024544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024798-1024923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1030098-1030241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1031387-1031506:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1032665-1032862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1033769-1033860:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034235-1034345:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1035534-1035657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1036157-1036266:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1037252-1037354:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1038298-1038362:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1038877-1038970:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1039687-1039806:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1040211-1040325:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1040874-1041013:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1041218-1041354:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1041646-1041726:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1041842-1041969:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1042691-1042805:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1043758-1043959:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1044280-1044389:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1044494-1044574:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1045125-1045248:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1045594-1045715:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1046680-1046791:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1047228-1047337:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1048638-1048768:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1049423-1049591:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1050540-1050710:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1051724-1051785:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1051915-1051972:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1052460-1052534:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1053648-1053825:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1055416-1055539:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1056213-1056465:1:exon

ATF1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1061819..1073860
location: region:1061819-1073860:1
so has part: feature:1061819-1073860:1:exon
subclass of: SO_0000010

110478532
type: Gene
SIO_000068: ncbigene

position:1061819:1
position: 1061819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073860:1
position: 1073860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061819-1073860:1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ATF1
product: activating transcription factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021545210.1
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: join(1061819..1061863,1066862..1066975,1068369..1068497,1070092..1070192,1070500..1070630,1071237..1071416,1071494..1071653,1072467..1072607,1072727..1073860)
location: region:1061819-1073860:1
so has part: feature:1061819-1061863:1:exon
so has part: feature:1066862-1066975:1:exon
so has part: feature:1068369-1068497:1:exon
so has part: feature:1070092-1070192:1:exon
so has part: feature:1070500-1070630:1:exon
so has part: feature:1071237-1071416:1:exon
so has part: feature:1071494-1071653:1:exon
so has part: feature:1072467-1072607:1:exon
so has part: feature:1072727-1073860:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1061819-1061863:1:exon

position:1061863:1
position: 1061863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1066862-1066975:1:exon

position:1066862:1
position: 1066862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066975:1
position: 1066975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1068369-1068497:1:exon

position:1068369:1
position: 1068369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068497:1
position: 1068497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1070092-1070192:1:exon

position:1070092:1
position: 1070092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070192:1
position: 1070192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1070500-1070630:1:exon

position:1070500:1
position: 1070500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070630:1
position: 1070630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1071237-1071416:1:exon

position:1071237:1
position: 1071237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071416:1
position: 1071416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1071494-1071653:1:exon

position:1071494:1
position: 1071494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071653:1
position: 1071653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1072467-1072607:1:exon

position:1072467:1
position: 1072467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072607:1
position: 1072607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1072727-1073860:1:exon

position:1072727:1
position: 1072727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ATF1
product: activating transcription factor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021545213.1
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: join(1061819..1061863,1066862..1066975,1068369..1068497,1070092..1070192,1070500..1070630,1071237..1071416,1071494..1071653,1072467..1072620,1072727..1072824)
location: region:1061819-1072824:1
so has part: feature:1061819-1061863:1:exon
so has part: feature:1066862-1066975:1:exon
so has part: feature:1068369-1068497:1:exon
so has part: feature:1070092-1070192:1:exon
so has part: feature:1070500-1070630:1:exon
so has part: feature:1071237-1071416:1:exon
so has part: feature:1071494-1071653:1:exon
so has part: feature:1072467-1072620:1:exon
so has part: feature:1072727-1072824:1:exon

position:1072824:1
position: 1072824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061819-1061863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1066862-1066975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1068369-1068497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070092-1070192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070500-1070630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071237-1071416:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1071494-1071653:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072467-1072620:1:exon

position:1072620:1
position: 1072620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1072727-1072824:1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ATF1
product: activating transcription factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021545212.1
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: join(1061819..1061863,1066862..1066975,1068369..1068497,1070092..1070192,1070500..1070630,1071237..1071416,1071494..1071653,1072467..1072648)
location: region:1061819-1072648:1
so has part: feature:1061819-1061863:1:exon
so has part: feature:1066862-1066975:1:exon
so has part: feature:1068369-1068497:1:exon
so has part: feature:1070092-1070192:1:exon
so has part: feature:1070500-1070630:1:exon
so has part: feature:1071237-1071416:1:exon
so has part: feature:1071494-1071653:1:exon
so has part: feature:1072467-1072648:1:exon

position:1072648:1
position: 1072648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061819-1061863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1066862-1066975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1068369-1068497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070092-1070192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070500-1070630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071237-1071416:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1071494-1071653:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072467-1072648:1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ATF1
product: activating transcription factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021545211.1
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: join(1066862..1066931,1068369..1068497,1070092..1070192,1070500..1070630,1071237..1071416,1071494..1071653,1072467..1072607,1072727..1073860)
location: region:1066862-1073860:1
so has part: feature:1066862-1066931:1:exon
so has part: feature:1068369-1068497:1:exon
so has part: feature:1070092-1070192:1:exon
so has part: feature:1070500-1070630:1:exon
so has part: feature:1071237-1071416:1:exon
so has part: feature:1071494-1071653:1:exon
so has part: feature:1072467-1072607:1:exon
so has part: feature:1072727-1073860:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1066862-1066931:1:exon

position:1066931:1
position: 1066931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1068369-1068497:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070092-1070192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070500-1070630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071237-1071416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071494-1071653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072467-1072607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072727-1073860:1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X1
translation: MMEEVHKGSSSSSVPSQPSAVQGTTLQAAQLSHIAQQMSLRGSAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSSQKARGILARRPSYRKILKDLSSEDAQDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLAGPGADGVQGLQTLTMANAGASQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTSSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSVFHSSKTIDFLYNMLVTKYKDETRKPHQNSCWHNWKLLNSRLQLQQKDSHVWRGR
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: join(1066865..1066975,1068369..1068497,1070092..1070192,1070500..1070630,1071237..1071416,1071494..1071653,1072467..1072607,1072727..1072892)
location: region:1066865-1072892:1
so has part: feature:1066865-1066975:1:exon
so has part: feature:1068369-1068497:1:exon
so has part: feature:1070092-1070192:1:exon
so has part: feature:1070500-1070630:1:exon
so has part: feature:1071237-1071416:1:exon
so has part: feature:1071494-1071653:1:exon
so has part: feature:1072467-1072607:1:exon
so has part: feature:1072727-1072892:1:exon

XP_021400885.1
type: Protein
SIO_000068: ncbiprotein

position:1066865:1
position: 1066865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072892:1
position: 1072892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066865-1066975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1068369-1068497:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070092-1070192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070500-1070630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071237-1071416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071494-1071653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072467-1072607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1072727-1072892:1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X3
translation: MMEEVHKGSSSSSVPSQPSAVQGTTLQAAQLSHIAQQMSLRGSAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSSQKARGILARRPSYRKILKDLSSEDAQDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLAGPGADGVQGLQTLTMANAGASQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTSSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: join(1066865..1066975,1068369..1068497,1070092..1070192,1070500..1070630,1071237..1071416,1071494..1071653,1072467..1072611)
location: region:1066865-1072611:1
so has part: feature:1066865-1066975:1:exon
so has part: feature:1068369-1068497:1:exon
so has part: feature:1070092-1070192:1:exon
so has part: feature:1070500-1070630:1:exon
so has part: feature:1071237-1071416:1:exon
so has part: feature:1071494-1071653:1:exon
so has part: feature:1072467-1072611:1:exon

XP_021400887.1
type: Protein
SIO_000068: ncbiprotein

position:1072611:1
position: 1072611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066865-1066975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1068369-1068497:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070092-1070192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070500-1070630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071237-1071416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071494-1071653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072467-1072611:1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X3
translation: MMEEVHKGSSSSSVPSQPSAVQGTTLQAAQLSHIAQQMSLRGSAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSSQKARGILARRPSYRKILKDLSSEDAQDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLAGPGADGVQGLQTLTMANAGASQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTSSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: join(1066865..1066975,1068369..1068497,1070092..1070192,1070500..1070630,1071237..1071416,1071494..1071653,1072467..1072611)
location: region:1066865-1072611:1
so has part: feature:1066865-1066975:1:exon
so has part: feature:1068369-1068497:1:exon
so has part: feature:1070092-1070192:1:exon
so has part: feature:1070500-1070630:1:exon
so has part: feature:1071237-1071416:1:exon
so has part: feature:1071494-1071653:1:exon
so has part: feature:1072467-1072611:1:exon

XP_021400888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1066865-1066975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1068369-1068497:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070092-1070192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070500-1070630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071237-1071416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071494-1071653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072467-1072611:1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X2
translation: MSLRGSAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSSQKARGILARRPSYRKILKDLSSEDAQDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLAGPGADGVQGLQTLTMANAGASQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTSSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSVFHSSKTIDFLYNMLVTKYKDETRKPHQNSCWHNWKLLNSRLQLQQKDSHVWRGR
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: join(1068369..1068497,1070092..1070192,1070500..1070630,1071237..1071416,1071494..1071653,1072467..1072607,1072727..1072892)
location: region:1068369-1072892:1
so has part: feature:1068369-1068497:1:exon
so has part: feature:1070092-1070192:1:exon
so has part: feature:1070500-1070630:1:exon
so has part: feature:1071237-1071416:1:exon
so has part: feature:1071494-1071653:1:exon
so has part: feature:1072467-1072607:1:exon
so has part: feature:1072727-1072892:1:exon

XP_021400886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1068369-1068497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070092-1070192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070500-1070630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1071237-1071416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071494-1071653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072467-1072607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072727-1072892:1:exon

TMPRSS12
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TMPRSS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1076332..1087173)
location: region:1076332-1087173:-1
so has part: feature:1076332-1087173:-1:exon
subclass of: SO_0000010

110478525
type: Gene
SIO_000068: ncbigene

position:1076332:-1
position: 1076332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087173:-1
position: 1087173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076332-1087173:-1:exon

TMPRSS12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TMPRSS12
product: transmembrane serine protease 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031507203.1
SIO_010081: TMPRSS12
subclass of: SO_0000673
so part of: TMPRSS12
location: complement(join(1076332..1077181,1079667..1079809,1081794..1082065,1085129..1085399,1087095..1087173))
location: region:1076332-1087173:-1
so has part: feature:1087095-1087173:-1:exon
so has part: feature:1085129-1085399:-1:exon
so has part: feature:1081794-1082065:-1:exon
so has part: feature:1079667-1079809:-1:exon
so has part: feature:1076332-1077181:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1087095-1087173:-1:exon

position:1087095:-1
position: 1087095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1085129-1085399:-1:exon

position:1085129:-1
position: 1085129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085399:-1
position: 1085399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1081794-1082065:-1:exon

position:1081794:-1
position: 1081794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082065:-1
position: 1082065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1079667-1079809:-1:exon

position:1079667:-1
position: 1079667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079809:-1
position: 1079809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1076332-1077181:-1:exon

position:1077181:-1
position: 1077181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMPRSS12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TMPRSS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 12
translation: MRARPALLPLLLLLLLAGPRPAEPADADNKPRISPISDIALVPQQAPCFAECRQQPQLGRSVASWIVGGHEAPEGAWPWVVSLQVLRGAGRFLHLCGGVLLGPRAVLTAGHCVDRRTDPWSWRAVLGVHNLQKHGPQTARRRIRRIMVHSEFRRETFENDVALFELKSAVRYSRSIQPACLPPAALLPPLENSSDCSISGWGRTSEKGKLSSVLKQAHVGILPPSLCNSSEGYAGLMNDKALCAGAWAGGTDSCQGDSGGPLVCYHPGSAKYYLVGIASFGVGCGRPRYPGIYVRLSQYRKWIKAKVLLTNQTQNPSGGTTLTILLALLHTLLTQAL
SIO_010081: TMPRSS12
subclass of: SO_0000673
so part of: TMPRSS12
location: complement(join(1076933..1077181,1079667..1079809,1081794..1082065,1085129..1085399,1087095..1087173))
location: region:1076933-1087173:-1
so has part: feature:1087095-1087173:-1:exon
so has part: feature:1085129-1085399:-1:exon
so has part: feature:1081794-1082065:-1:exon
so has part: feature:1079667-1079809:-1:exon
so has part: feature:1076933-1077181:-1:exon

XP_031363063.1
type: Protein
SIO_000068: ncbiprotein

position:1076933:-1
position: 1076933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087095-1087173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1085129-1085399:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1081794-1082065:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1079667-1079809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1076933-1077181:-1:exon

METTL7A
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: METTL7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1088448..1090632)
location: region:1088448-1090632:-1
so has part: feature:1088448-1090632:-1:exon
subclass of: SO_0000010

110478531
type: Gene
SIO_000068: ncbigene

position:1088448:-1
position: 1088448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090632:-1
position: 1090632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1088448-1090632:-1:exon

METTL7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: METTL7A
product: methyltransferase like 7A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_021545209.1
SIO_010081: METTL7A
subclass of: SO_0000673
so part of: METTL7A
location: complement(join(1088448..1089172,1089905..1090632))
location: region:1088448-1090632:-1
so has part: feature:1089905-1090632:-1:exon
so has part: feature:1088448-1089172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1089905-1090632:-1:exon

position:1089905:-1
position: 1089905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1088448-1089172:-1:exon

position:1089172:-1
position: 1089172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

METTL7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: METTL7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 7A
translation: MPEAAASVLLLRAGLALLAWPVYLLSFLGIWEPFCRKVFFPFFLEKLSGVRDKKFKQHKQELFRTLPHFRGPSGELRLLEIGTGSGSNFQFYPAGCRVTCTDISPSFQEGLCRQVGKNGHLRFQRFLVAAGEDLGQVPSGSVDAVVSTLVLCSVRSVSGTLGEVLRVLRPGGAFYFLEHVAAEPSSWTYFWQQVCFPTWKLVFAGCCLTRELWKNLEEAKFSELRVQHISVPMPWMPIEPHIVGYAVK
SIO_010081: METTL7A
subclass of: SO_0000673
so part of: METTL7A
location: complement(join(1088936..1089172,1089905..1090414))
location: region:1088936-1090414:-1
so has part: feature:1089905-1090414:-1:exon
so has part: feature:1088936-1089172:-1:exon

XP_021400884.1
type: Protein
SIO_000068: ncbiprotein

position:1088936:-1
position: 1088936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090414:-1
position: 1090414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089905-1090414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088936-1089172:-1:exon

SCN8A
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SCN8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1093441..1162466
location: region:1093441-1162466:1
so has part: feature:1093441-1162466:1:exon
subclass of: SO_0000010

110478530
type: Gene
SIO_000068: ncbigene

position:1093441:1
position: 1093441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162466:1
position: 1162466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093441-1162466:1:exon

SCN8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SCN8A
product: sodium voltage-gated channel alpha subunit 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021545207.2
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: join(1093441..1093556,1103068..1103397,1114146..1114264,1115566..1115679,1117317..1117448,1121750..1121841,1126174..1126395,1126781..1126844,1127320..1127461,1128076..1128282,1128524..1128811,1130265..1130624,1132565..1132700,1134689..1134927,1135099..1135272,1136034..1136390,1138370..1138840,1140841..1140958,1142042..1142196,1143699..1143872,1148664..1148786,1154312..1154596,1156479..1156532,1157517..1157654,1158378..1158482,1159948..1160218,1161316..1162466)
location: region:1093441-1162466:1
so has part: feature:1093441-1093556:1:exon
so has part: feature:1103068-1103397:1:exon
so has part: feature:1114146-1114264:1:exon
so has part: feature:1115566-1115679:1:exon
so has part: feature:1117317-1117448:1:exon
so has part: feature:1121750-1121841:1:exon
so has part: feature:1126174-1126395:1:exon
so has part: feature:1126781-1126844:1:exon
so has part: feature:1127320-1127461:1:exon
so has part: feature:1128076-1128282:1:exon
so has part: feature:1128524-1128811:1:exon
so has part: feature:1130265-1130624:1:exon
so has part: feature:1132565-1132700:1:exon
so has part: feature:1134689-1134927:1:exon
so has part: feature:1135099-1135272:1:exon
so has part: feature:1136034-1136390:1:exon
so has part: feature:1138370-1138840:1:exon
so has part: feature:1140841-1140958:1:exon
so has part: feature:1142042-1142196:1:exon
so has part: feature:1143699-1143872:1:exon
so has part: feature:1148664-1148786:1:exon
so has part: feature:1154312-1154596:1:exon
so has part: feature:1156479-1156532:1:exon
so has part: feature:1157517-1157654:1:exon
so has part: feature:1158378-1158482:1:exon
so has part: feature:1159948-1160218:1:exon
so has part: feature:1161316-1162466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1093441-1093556:1:exon

position:1093556:1
position: 1093556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1103068-1103397:1:exon

position:1103068:1
position: 1103068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103397:1
position: 1103397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1114146-1114264:1:exon

position:1114146:1
position: 1114146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114264:1
position: 1114264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1115566-1115679:1:exon

position:1115566:1
position: 1115566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115679:1
position: 1115679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1117317-1117448:1:exon

position:1117317:1
position: 1117317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1117448:1
position: 1117448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1121750-1121841:1:exon

position:1121750:1
position: 1121750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121841:1
position: 1121841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1126174-1126395:1:exon

position:1126174:1
position: 1126174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126395:1
position: 1126395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1126781-1126844:1:exon

position:1126781:1
position: 1126781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126844:1
position: 1126844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1127320-1127461:1:exon

position:1127320:1
position: 1127320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127461:1
position: 1127461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1128076-1128282:1:exon

position:1128076:1
position: 1128076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128282:1
position: 1128282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1128524-1128811:1:exon

position:1128524:1
position: 1128524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128811:1
position: 1128811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1130265-1130624:1:exon

position:1130265:1
position: 1130265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130624:1
position: 1130624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1132565-1132700:1:exon

position:1132565:1
position: 1132565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132700:1
position: 1132700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1134689-1134927:1:exon

position:1134689:1
position: 1134689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134927:1
position: 1134927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1135099-1135272:1:exon

position:1135099:1
position: 1135099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135272:1
position: 1135272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1136034-1136390:1:exon

position:1136034:1
position: 1136034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136390:1
position: 1136390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1138370-1138840:1:exon

position:1138370:1
position: 1138370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138840:1
position: 1138840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1140841-1140958:1:exon

position:1140841:1
position: 1140841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140958:1
position: 1140958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1142042-1142196:1:exon

position:1142042:1
position: 1142042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142196:1
position: 1142196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1143699-1143872:1:exon

position:1143699:1
position: 1143699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143872:1
position: 1143872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1148664-1148786:1:exon

position:1148664:1
position: 1148664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148786:1
position: 1148786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1154312-1154596:1:exon

position:1154312:1
position: 1154312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154596:1
position: 1154596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1156479-1156532:1:exon

position:1156479:1
position: 1156479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156532:1
position: 1156532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1157517-1157654:1:exon

position:1157517:1
position: 1157517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157654:1
position: 1157654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1158378-1158482:1:exon

position:1158378:1
position: 1158378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1158482:1
position: 1158482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1159948-1160218:1:exon

position:1159948:1
position: 1159948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160218:1
position: 1160218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1161316-1162466:1:exon

position:1161316:1
position: 1161316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCN8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SCN8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha
translation: MAARLLAPPGPESFKPFTPESLANIEKHIAEMKKKQRSKQDSSHRDDDEDSKPKPNSDLEAGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTPKSPKSPKYPNPPNPWNPQIRYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETFLDNGSKGFDWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKLSSKSAKERRNRRKKRKDRELSEGDEKCDNEKVFKSESEDGMRRKAFRLPDNRLGRKFSIMNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRGRDRRSSYSGYSGYSQGSRSSRIFPALRRSIKRNSTVDCNGVVSLIGGPPSSMPGGRILPEGTTEIEIRKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWMKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAHFKQREADEVKPLDELYDKKVNCIANHTGADINRDVDFLKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLHTEDFSSDTDPDGSKEKLDESSSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVFFFSLIANAFFFSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETAEHRFEIEVVNNKTDCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINFVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVIQRAYRARLARRGFGGRRAATKLDNGAATREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRREKAKRQKDARVAKC
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: join(1103122..1103397,1114146..1114264,1115566..1115679,1117317..1117448,1121750..1121841,1126174..1126395,1126781..1126844,1127320..1127461,1128076..1128282,1128524..1128811,1130265..1130624,1132565..1132700,1134689..1134927,1135099..1135272,1136034..1136390,1138370..1138840,1140841..1140958,1142042..1142196,1143699..1143872,1148664..1148786,1154312..1154596,1156479..1156532,1157517..1157654,1158378..1158482,1159948..1160218,1161316..1162460)
location: region:1103122-1162460:1
so has part: feature:1103122-1103397:1:exon
so has part: feature:1114146-1114264:1:exon
so has part: feature:1115566-1115679:1:exon
so has part: feature:1117317-1117448:1:exon
so has part: feature:1121750-1121841:1:exon
so has part: feature:1126174-1126395:1:exon
so has part: feature:1126781-1126844:1:exon
so has part: feature:1127320-1127461:1:exon
so has part: feature:1128076-1128282:1:exon
so has part: feature:1128524-1128811:1:exon
so has part: feature:1130265-1130624:1:exon
so has part: feature:1132565-1132700:1:exon
so has part: feature:1134689-1134927:1:exon
so has part: feature:1135099-1135272:1:exon
so has part: feature:1136034-1136390:1:exon
so has part: feature:1138370-1138840:1:exon
so has part: feature:1140841-1140958:1:exon
so has part: feature:1142042-1142196:1:exon
so has part: feature:1143699-1143872:1:exon
so has part: feature:1148664-1148786:1:exon
so has part: feature:1154312-1154596:1:exon
so has part: feature:1156479-1156532:1:exon
so has part: feature:1157517-1157654:1:exon
so has part: feature:1158378-1158482:1:exon
so has part: feature:1159948-1160218:1:exon
so has part: feature:1161316-1162460:1:exon

XP_021400882.1
type: Protein
SIO_000068: ncbiprotein

position:1103122:1
position: 1103122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162460:1
position: 1162460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103122-1103397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1114146-1114264:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1115566-1115679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1117317-1117448:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1121750-1121841:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1126174-1126395:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1126781-1126844:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1127320-1127461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1128076-1128282:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1128524-1128811:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1130265-1130624:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1132565-1132700:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1134689-1134927:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1135099-1135272:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1136034-1136390:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1138370-1138840:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1140841-1140958:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1142042-1142196:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1143699-1143872:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1148664-1148786:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1154312-1154596:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1156479-1156532:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1157517-1157654:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1158378-1158482:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1159948-1160218:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1161316-1162460:1:exon

FIGNL2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FIGNL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1173493..1185602)
location: region:1173493-1185602:-1
so has part: feature:1173493-1185602:-1:exon
subclass of: SO_0000010

110478524
type: Gene
SIO_000068: ncbigene

position:1173493:-1
position: 1173493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185602:-1
position: 1185602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173493-1185602:-1:exon

FIGNL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FIGNL2
product: fidgetin like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021545201.1
SIO_010081: FIGNL2
subclass of: SO_0000673
so part of: FIGNL2
location: complement(join(1173493..1175695,1185502..1185602))
location: region:1173493-1185602:-1
so has part: feature:1185502-1185602:-1:exon
so has part: feature:1173493-1175695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1185502-1185602:-1:exon

position:1185502:-1
position: 1185502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1173493-1175695:-1:exon

position:1175695:-1
position: 1175695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FIGNL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FIGNL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative fidgetin-like protein 2
translation: MHWSPDHAQSLNQWPEQHLDVSSTTSSPAHKSELYPSTRQRFNYAWANDDISALTASNLLKRYAEKYSGVLDAPYERPPLGAYGDGAFGPVNGQKDGEPWPGAHGSDGSYALTPIHDGLAGAKGVVPPAAGGAVGLGGSAAAAANLGDAAYAGGSCGAAAGGSGALGASQEYPSGYAGTYLPSGYCAQPAAALPPPHPAGLHGSGLLQPPHASPALVPGYGSSGAVYNYAAGGYPPQPGYGGIHPPHPSASYLPSGIAAPTPIPAPPPCARPPGVPGYGYQGAGLGALAVPPLGTEAAGALKRKAFDGGGEDDGEGRYRKYGYEQPKSPYALSDNGECRGNGFGSSGESPQVAFKAGKRAAGAGGAEEPGSKYGGQQMKGMASPAYGARDAALRPAEPFEKFSPPVANGERAAEPGAPFPLRPPPKALEERPKSVDPLLLELVNAKVVERGPPVQWADVAGQASVKAAIEEELLWPILRPGSYGGAGHPPRTLLLFGPRGTGKTLLSRCISTQLGSTLLRLSGAALLSTWKAEAEKILQTVFLVANCRQPSVVLITEAESLLAARAGEDGGQASGLKSQLLSYLDDVAASSERGVVVIGTTARPGSMDEASRRRFGTRLYVAPPDGEARRHILRRALAQQSCRLSERELAALAQRTESFSGAELLRLCQHAGVAARRAPPGPPGPYQELEKAFCKVRPAVSQKELDLFLEWDKMYGTRH
SIO_010081: FIGNL2
subclass of: SO_0000673
so part of: FIGNL2
location: complement(1173525..1175684)
location: region:1173525-1175684:-1
so has part: feature:1173525-1175684:-1:exon

XP_021400876.1
type: Protein
SIO_000068: ncbiprotein

position:1173525:-1
position: 1173525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175684:-1
position: 1175684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173525-1175684:-1:exon

PFDN5
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PFDN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1232769..1234785
location: region:1232769-1234785:1
so has part: feature:1232769-1234785:1:exon
subclass of: SO_0000010

110483340
type: Gene
SIO_000068: ncbigene

position:1232769:1
position: 1232769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234785:1
position: 1234785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1232769-1234785:1:exon

PFDN5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PFDN5
product: prefoldin subunit 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 11 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021553185.2
SIO_010081: PFDN5
subclass of: SO_0000673
so part of: PFDN5
location: join(1232769..1232787,1232869..1232900,1233068..1233142,1233626..1233731,1234544..1234785)
location: region:1232769-1234785:1
so has part: feature:1232769-1232787:1:exon
so has part: feature:1232869-1232900:1:exon
so has part: feature:1233068-1233142:1:exon
so has part: feature:1233626-1233731:1:exon
so has part: feature:1234544-1234785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1232769-1232787:1:exon

position:1232787:1
position: 1232787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1232869-1232900:1:exon

position:1232869:1
position: 1232869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1232900:1
position: 1232900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1233068-1233142:1:exon

position:1233068:1
position: 1233068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233142:1
position: 1233142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1233626-1233731:1:exon

position:1233626:1
position: 1233626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233731:1
position: 1233731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1234544-1234785:1:exon

position:1234544:1
position: 1234544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PFDN5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PFDN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prefoldin subunit 5
translation: MWGFWAGKDLLVPLTSSMYVPGKLQDVRTVLVDVGTGYYVEKSAEDARAFFKRKIEFLTRQMEKIQPALQEKHAMKQAVLEMLAQKLQALTAAPGAAKA
SIO_010081: PFDN5
subclass of: SO_0000673
so part of: PFDN5
location: join(1232769..1232787,1232869..1232900,1233068..1233142,1233626..1233731,1234544..1234611)
location: region:1232769-1234611:1
so has part: feature:1232769-1232787:1:exon
so has part: feature:1232869-1232900:1:exon
so has part: feature:1233068-1233142:1:exon
so has part: feature:1233626-1233731:1:exon
so has part: feature:1234544-1234611:1:exon

XP_021408860.2
type: Protein
SIO_000068: ncbiprotein

position:1234611:1
position: 1234611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1232769-1232787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1232869-1232900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1233068-1233142:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233626-1233731:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1234544-1234611:1:exon

C1QL4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: C1QL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1237561..1242120)
location: region:1237561-1242120:-1
so has part: feature:1237561-1242120:-1:exon
subclass of: SO_0000010

110483342
type: Gene
SIO_000068: ncbigene

position:1237561:-1
position: 1237561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242120:-1
position: 1242120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1237561-1242120:-1:exon

C1QL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: C1QL4
product: complement C1q like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021553186.1
SIO_010081: C1QL4
subclass of: SO_0000673
so part of: C1QL4
location: complement(join(1237561..1237740,1241605..1242120))
location: region:1237561-1242120:-1
so has part: feature:1241605-1242120:-1:exon
so has part: feature:1237561-1237740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1241605-1242120:-1:exon

position:1241605:-1
position: 1241605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1237561-1237740:-1:exon

position:1237740:-1
position: 1237740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C1QL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: C1QL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q-like protein 4
translation: MLLLLLVAIPLLVHGSRAAAHYEMLGSCRMVCDPYPEPPAASAAPFLPGAKGEPGRKGRSGLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGGYIPSFYSPKIAFYAGLRKPHEGYEVLRFDDVVTNVGNYYEPSSGKFTCPLPGIYFFTYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSAILHLDVGDEVCVRLDGGKVHGGNTNKYSTFSGFIVYPD
SIO_010081: C1QL4
subclass of: SO_0000673
so part of: C1QL4
location: complement(join(1237561..1237740,1241605..1242120))
location: region:1237561-1242120:-1
so has part: feature:1241605-1242120:-1:exon
so has part: feature:1237561-1237740:-1:exon

XP_021408861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1241605-1242120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1237561-1237740:-1:exon

LOC116184543
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1268268..1293465
location: region:1268268-1293465:1
so has part: feature:1268268-1293465:1:exon
subclass of: SO_0000010

116184543
type: Gene
SIO_000068: ncbigene

position:1268268:1
position: 1268268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293465:1
position: 1293465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268268-1293465:1:exon

LOC116184543
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC116184543
product: spermatogenesis-associated serine-rich protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031507204.1
SIO_010081: LOC116184543
subclass of: SO_0000673
so part of: LOC116184543
location: join(1268268..1268465,1269211..1269260,1269692..1269851,1270411..1270494,1272238..1272373,1273532..1273590,1280207..1280316,1281194..1281370,1281464..1281701,1293422..1293465)
location: region:1268268-1293465:1
so has part: feature:1268268-1268465:1:exon
so has part: feature:1269211-1269260:1:exon
so has part: feature:1269692-1269851:1:exon
so has part: feature:1270411-1270494:1:exon
so has part: feature:1272238-1272373:1:exon
so has part: feature:1273532-1273590:1:exon
so has part: feature:1280207-1280316:1:exon
so has part: feature:1281194-1281370:1:exon
so has part: feature:1281464-1281701:1:exon
so has part: feature:1293422-1293465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268268-1268465:1:exon

position:1268465:1
position: 1268465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1269211-1269260:1:exon

position:1269211:1
position: 1269211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269260:1
position: 1269260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1269692-1269851:1:exon

position:1269692:1
position: 1269692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269851:1
position: 1269851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1270411-1270494:1:exon

position:1270411:1
position: 1270411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270494:1
position: 1270494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1272238-1272373:1:exon

position:1272238:1
position: 1272238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272373:1
position: 1272373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1273532-1273590:1:exon

position:1273532:1
position: 1273532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273590:1
position: 1273590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1280207-1280316:1:exon

position:1280207:1
position: 1280207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280316:1
position: 1280316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1281194-1281370:1:exon

position:1281194:1
position: 1281194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281370:1
position: 1281370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1281464-1281701:1:exon

position:1281464:1
position: 1281464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281701:1
position: 1281701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1293422-1293465:1:exon

position:1293422:1
position: 1293422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116184543
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC116184543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated serine-rich protein 2-like
translation: MFFSHFSLFFQVQAVRAVVPNRSNTEIVLVLQHFDNAVDRAVQAFMEGNASEVLKEWTVTGKKKNKKKKPKAKAPPGPGQEEKLENLEKNLEKNLGKLGISINGFHSNRCPSLESLPGLGNGISAFPAPAQPPTPARSDPGGRKMGCSLERSLKDLQRCSVALARFRALLREEVETSLRRVRVAFGEIQSCLMDREVALLAEMDKVKAEAMDLLSLRQRRAEALRALTEAAPAMSEEQLQELRADIKHFVSERKFDEELGRASGNSHCSQAHSGWEFRWEFPLELPEFPFLQHFVSERKFDEELGRHFVSERKFDEELGRASGNSHCSQAHSGWEFRWEFPLELPEFPFLQHFVSERKFDEELGRAGRFGCDLEGLRGSIGAFGTAGLPRSSRPRSARG
SIO_010081: LOC116184543
subclass of: SO_0000673
so part of: LOC116184543
location: join(1268324..1268465,1269211..1269260,1269692..1269851,1270411..1270494,1272238..1272373,1273532..1273590,1280207..1280316,1281194..1281370,1281464..1281701,1293422..1293465)
location: region:1268324-1293465:1
so has part: feature:1268324-1268465:1:exon
so has part: feature:1269211-1269260:1:exon
so has part: feature:1269692-1269851:1:exon
so has part: feature:1270411-1270494:1:exon
so has part: feature:1272238-1272373:1:exon
so has part: feature:1273532-1273590:1:exon
so has part: feature:1280207-1280316:1:exon
so has part: feature:1281194-1281370:1:exon
so has part: feature:1281464-1281701:1:exon
so has part: feature:1293422-1293465:1:exon

XP_031363064.1
type: Protein
SIO_000068: ncbiprotein

position:1268324:1
position: 1268324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268324-1268465:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1269211-1269260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1269692-1269851:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1270411-1270494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1272238-1272373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1273532-1273590:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1280207-1280316:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1281194-1281370:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1281464-1281701:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1293422-1293465:1:exon

LOC110484386
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110484386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1293617..1294148)
location: region:1293617-1294148:-1
so has part: feature:1293617-1294148:-1:exon
subclass of: SO_0000011

110484386
type: Gene
SIO_000068: ncbigene

position:1293617:-1
position: 1293617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294148:-1
position: 1294148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293617-1294148:-1:exon

LOC110484386
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110484386
product: uncharacterized LOC110484386
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002467737.1
SIO_010081: LOC110484386
subclass of: SO_0000673
so part of: LOC110484386
location: complement(join(1293617..1293632,1293725..1293817,1293910..1293999,1294120..1294148))
location: region:1293617-1294148:-1
so has part: feature:1294120-1294148:-1:exon
so has part: feature:1293910-1293999:-1:exon
so has part: feature:1293725-1293817:-1:exon
so has part: feature:1293617-1293632:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294120-1294148:-1:exon

position:1294120:-1
position: 1294120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1293910-1293999:-1:exon

position:1293910:-1
position: 1293910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293999:-1
position: 1293999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1293725-1293817:-1:exon

position:1293725:-1
position: 1293725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293817:-1
position: 1293817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1293617-1293632:-1:exon

position:1293632:-1
position: 1293632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZC3H10
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ZC3H10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1303762..1305242)
location: region:1303762-1305242:-1
so has part: feature:1303762-1305242:-1:exon
subclass of: SO_0000010

110484383
type: Gene
SIO_000068: ncbigene

position:1303762:-1
position: 1303762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305242:-1
position: 1305242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1303762-1305242:-1:exon

ZC3H10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ZC3H10
product: zinc finger CCCH-type containing 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021554987.1
SIO_010081: ZC3H10
subclass of: SO_0000673
so part of: ZC3H10
location: complement(1303762..1305242)
location: region:1303762-1305242:-1
so has part: feature:1303762-1305242:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303762-1305242:-1:exon

ZC3H10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ZC3H10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 10
translation: MPDRDAYAAAPAPGLAPGSAAGDDAAAGADDDDICRDFLRNVCKRGKRCRFRHPDISEVTNLGVRKNEFIFCHDFQNKECVRLSCRFIHGSKEDEDCYKKTGELPPRLRHKVAAGLGLSPADLPNSKEEVPICRDFLKGDCQRGAKCKFQHLQRDYEQGRRYEPYDGLYEPDEPVLKRRRAEGLYEGYEYGFGGARAVEYRLLEEENALLRKRVEDLKKQVNNLLATNEVLLEQNAQFRNQAKVMTLSSTAAATEQTLAPAVGSVTNYNHGIAQTHTTLSSQALQPRPVTQQDLVAPAGAQAAPPATAAPPPPPPPPMNPEIAPLSAALAQTIAQGMAPPPVSMAPVAVSVAPVAVSMAQPLGGITMSHATTPMVTYPIASQSMRITAMPH
SIO_010081: ZC3H10
subclass of: SO_0000673
so part of: ZC3H10
location: complement(1304067..1305242)
location: region:1304067-1305242:-1
so has part: feature:1304067-1305242:-1:exon

XP_021410662.1
type: Protein
SIO_000068: ncbiprotein

position:1304067:-1
position: 1304067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1304067-1305242:-1:exon

LOC110484385
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110484385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1307199..1308943)
location: region:1307199-1308943:-1
so has part: feature:1307199-1308943:-1:exon
subclass of: SO_0000011

110484385
type: Gene
SIO_000068: ncbigene

position:1307199:-1
position: 1307199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1308943:-1
position: 1308943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1307199-1308943:-1:exon

LOC110484385
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110484385
product: uncharacterized LOC110484385
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_002467736.2
SIO_010081: LOC110484385
subclass of: SO_0000673
so part of: LOC110484385
location: complement(join(1307199..1307369,1307892..1307914,1308805..1308943))
location: region:1307199-1308943:-1
so has part: feature:1308805-1308943:-1:exon
so has part: feature:1307892-1307914:-1:exon
so has part: feature:1307199-1307369:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1308805-1308943:-1:exon

position:1308805:-1
position: 1308805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1307892-1307914:-1:exon

position:1307892:-1
position: 1307892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307914:-1
position: 1307914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1307199-1307369:-1:exon

position:1307369:-1
position: 1307369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PA2G4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PA2G4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1310716..1353498)
location: region:1310716-1353498:-1
so has part: feature:1310716-1353498:-1:exon
subclass of: SO_0000010

110482390
type: Gene
SIO_000068: ncbigene

position:1310716:-1
position: 1310716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353498:-1
position: 1353498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310716-1353498:-1:exon

PA2G4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PA2G4
product: proliferation-associated 2G4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031507205.1
SIO_010081: PA2G4
subclass of: SO_0000673
so part of: PA2G4
location: complement(join(1310716..1311373,1311476..1311529,1312652..1312779,1314915..1314987,1321307..1321489,1340660..1340729,1342595..1342700,1343246..1343374,1352809..1353328,1353493..1353498))
location: region:1310716-1353498:-1
so has part: feature:1353493-1353498:-1:exon
so has part: feature:1352809-1353328:-1:exon
so has part: feature:1343246-1343374:-1:exon
so has part: feature:1342595-1342700:-1:exon
so has part: feature:1340660-1340729:-1:exon
so has part: feature:1321307-1321489:-1:exon
so has part: feature:1314915-1314987:-1:exon
so has part: feature:1312652-1312779:-1:exon
so has part: feature:1311476-1311529:-1:exon
so has part: feature:1310716-1311373:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1353493-1353498:-1:exon

position:1353493:-1
position: 1353493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1352809-1353328:-1:exon

position:1352809:-1
position: 1352809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353328:-1
position: 1353328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1343246-1343374:-1:exon