Lonchura striata domestica isolate Mets1 chromosome 26, lonStrDom2, whole genome shotgun sequence.
type: Entry
definition: Lonchura striata domestica isolate Mets1 chromosome 26, lonStrDom2, whole genome shotgun sequence.
sequence version: NC_042591.1
sequence date: 2019-11-05
sequence: sequence
division: CON
label: NC_042591.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA391487
dblink: SAMN11521339
keyword: WGS
keyword: RefSeq
source: Lonchura striata domestica (Bengalese finch)
organism: Lonchura striata domestica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016787.1.\nAssembly name: lonStrDom2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the HHMI/UCSF on 2019/06/05. The\noriginal whole-genome shotgun project has the accession\nSWKX00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: HHMI/UCSF\nAssembly Date :: 30-NOV-2018\nAssembly Method :: AllPaths v. JAN-2015; HiRise v.\n NOV-2018\nAssembly Name :: lonStrDom2\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: GCA_002197715.1\nGenome Coverage :: 151.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Lonchura striata domestica\n Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 7149050
topology: linear
so has quality: SO_0000987
location: 1..7149050
location: region:1-7149050:1
RO_0002162: 299123

NC_042591
type: RefSeq
SIO_000068: refseq

PRJNA391487
type: BioProject
SIO_000068: bioproject

SAMN11521339
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7149050:1
position: 7149050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7149050:1:source
so part of: sequence
organism: Lonchura striata domestica
mol type: genomic DNA
isolate: Mets1
sub species: domestica
chromosome: 26
sex: male
tissue type: blood
dev stage: adult

299123
type: Taxonomy
SIO_000068: taxonomy

PIFO
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PIFO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 36..7309
location: region:36-7309:1
so has part: feature:36-7309:1:exon
subclass of: SO_0000010

110477172
type: Gene
SIO_000068: ncbigene

position:36:1
position: 36
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7309:1
position: 7309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36-7309:1:exon

PIFO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PIFO
product: primary cilia formation
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506981.1
SIO_010081: PIFO
subclass of: SO_0000673
so part of: PIFO
location: join(36..60,2402..2544,3496..3591,4124..4245,6289..6415,7168..7309)
location: region:36-7309:1
so has part: feature:36-60:1:exon
so has part: feature:2402-2544:1:exon
so has part: feature:3496-3591:1:exon
so has part: feature:4124-4245:1:exon
so has part: feature:6289-6415:1:exon
so has part: feature:7168-7309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36-60:1:exon

position:60:1
position: 60
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2402-2544:1:exon

position:2402:1
position: 2402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2544:1
position: 2544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3496-3591:1:exon

position:3496:1
position: 3496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3591:1
position: 3591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4124-4245:1:exon

position:4124:1
position: 4124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4245:1
position: 4245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6289-6415:1:exon

position:6289:1
position: 6289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6415:1
position: 6415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7168-7309:1:exon

position:7168:1
position: 7168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIFO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PIFO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein pitchfork
translation: MAARHDPKAVAKLISFGTTQERKMFPQHFGADRLGIEALGAQGSPFLGPGSYLGPENILKSSTSTRPMSTRGYVMGARTAPRFQQKAQFPHSHPQFPHSHPSSLTPIPNSLTPIPIPSLPSPIPTFPSPPGTYELRGPPTTGVSWPMKFGAPDWAKVPRPAQRTAKLQVQRITLDKKFHKTQGREAYLKLYHG
SIO_010081: PIFO
subclass of: SO_0000673
so part of: PIFO
location: join(36..60,2402..2544,3496..3591,4124..4245,6289..6415,7168..7236)
location: region:36-7236:1
so has part: feature:36-60:1:exon
so has part: feature:2402-2544:1:exon
so has part: feature:3496-3591:1:exon
so has part: feature:4124-4245:1:exon
so has part: feature:6289-6415:1:exon
so has part: feature:7168-7236:1:exon

XP_031362841.1
type: Protein
SIO_000068: ncbiprotein

position:7236:1
position: 7236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36-60:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2402-2544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3496-3591:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4124-4245:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6289-6415:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7168-7236:1:exon

TAF8
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TAF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9036..17301)
location: region:9036-17301:-1
so has part: feature:9036-17301:-1:exon
subclass of: SO_0000010

110477142
type: Gene
SIO_000068: ncbigene

position:9036:-1
position: 9036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17301:-1
position: 17301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9036-17301:-1:exon

TAF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TAF8
product: TATA-box binding protein associated factor 8, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021542610.2
SIO_010081: TAF8
subclass of: SO_0000673
so part of: TAF8
location: complement(join(9036..9480,10759..10901,11703..11850,12749..12873,13238..13300,13830..13928,15380..15533,17242..17301))
location: region:9036-17301:-1
so has part: feature:17242-17301:-1:exon
so has part: feature:15380-15533:-1:exon
so has part: feature:13830-13928:-1:exon
so has part: feature:13238-13300:-1:exon
so has part: feature:12749-12873:-1:exon
so has part: feature:11703-11850:-1:exon
so has part: feature:10759-10901:-1:exon
so has part: feature:9036-9480:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17242-17301:-1:exon

position:17242:-1
position: 17242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15380-15533:-1:exon

position:15380:-1
position: 15380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15533:-1
position: 15533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13830-13928:-1:exon

position:13830:-1
position: 13830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13928:-1
position: 13928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13238-13300:-1:exon

position:13238:-1
position: 13238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13300:-1
position: 13300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12749-12873:-1:exon

position:12749:-1
position: 12749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12873:-1
position: 12873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11703-11850:-1:exon

position:11703:-1
position: 11703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11850:-1
position: 11850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10759-10901:-1:exon

position:10759:-1
position: 10759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10901:-1
position: 10901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9036-9480:-1:exon

position:9480:-1
position: 9480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TAF8
product: TATA-box binding protein associated factor 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021542609.2
SIO_010081: TAF8
subclass of: SO_0000673
so part of: TAF8
location: complement(join(9036..9480,10759..10901,11703..11850,12749..12873,13238..13300,13830..13928,15380..16489))
location: region:9036-16489:-1
so has part: feature:15380-16489:-1:exon
so has part: feature:13830-13928:-1:exon
so has part: feature:13238-13300:-1:exon
so has part: feature:12749-12873:-1:exon
so has part: feature:11703-11850:-1:exon
so has part: feature:10759-10901:-1:exon
so has part: feature:9036-9480:-1:exon

position:16489:-1
position: 16489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15380-16489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13830-13928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13238-13300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12749-12873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11703-11850:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10759-10901:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9036-9480:-1:exon

TAF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TAF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 8 isoform X4
translation: MRTAPYGSKMADTASGGSGTRGAKAAGSPADNYQLARRRTLQVVVSSLLTEAGFESAEKAAVETLTEMIQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFNVETLPAYAKRSQRMVITAPPVTNQPVTPKALTAGQNKPHPPHIPGHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTVPYLTALLPSELEMQQMEETDSSEQDEQTDTENLPLHMSTDDAGPEKENSSVLQQSSSLAGSRNGEENVIDNPYLRPVKKPKIRRKK
SIO_010081: TAF8
subclass of: SO_0000673
so part of: TAF8
location: complement(join(9337..9480,10759..10901,11703..11850,12749..12873,13238..13300,13830..13928,15380..15533,17242..17301))
location: region:9337-17301:-1
so has part: feature:17242-17301:-1:exon
so has part: feature:15380-15533:-1:exon
so has part: feature:13830-13928:-1:exon
so has part: feature:13238-13300:-1:exon
so has part: feature:12749-12873:-1:exon
so has part: feature:11703-11850:-1:exon
so has part: feature:10759-10901:-1:exon
so has part: feature:9337-9480:-1:exon

XP_021398285.2
type: Protein
SIO_000068: ncbiprotein

position:9337:-1
position: 9337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17242-17301:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15380-15533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13830-13928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13238-13300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12749-12873:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11703-11850:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10759-10901:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9337-9480:-1:exon

TAF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TAF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 8 isoform X1
translation: MDPILTKGSHPVPSHESHPTPWIPPHPTLSSEVPPSCHALTLIPIPVVLLFPCPIVPIVPVVPIVLIVPVVPAVPVVPTVPVILVVLIVPVVLIVPIVHIVPFVLIVPVVPSFPLFSLFLLFSFHHSRRSRHSHCSCCSHSIIPAVPVVLIIPVVLTVPSFPLFSLFLLFSLFLLFRRSHCSHSSCCSHSSCCSVVPTVLIVPVVLVPPFPPFPLFSSFLLFPSHRSRCSHRPRCSHRSRCSLLAIPIVLIVPIVPFPLFPLFSSFLLFSSHHSCRSRCSHRSHCSIIPVVLMVPVVPFPPFPFRQRGAKAAGSPADNYQLARRRTLQVVVSSLLTEAGFESAEKAAVETLTEMIQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFNVETLPAYAKRSQRMVITAPPVTNQPVTPKALTAGQNKPHPPHIPGHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTVPYLTALLPSELEMQQMEETDSSEQDEQTDTENLPLHMSTDDAGPEKENSSVLQQSSSLAGSRNGEENVIDNPYLRPVKKPKIRRKK
SIO_010081: TAF8
subclass of: SO_0000673
so part of: TAF8
location: complement(join(9337..9480,10759..10901,11703..11850,12749..12873,13238..13300,13830..13928,15380..16451))
location: region:9337-16451:-1
so has part: feature:15380-16451:-1:exon
so has part: feature:13830-13928:-1:exon
so has part: feature:13238-13300:-1:exon
so has part: feature:12749-12873:-1:exon
so has part: feature:11703-11850:-1:exon
so has part: feature:10759-10901:-1:exon
so has part: feature:9337-9480:-1:exon

XP_021398284.2
type: Protein
SIO_000068: ncbiprotein

position:16451:-1
position: 16451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15380-16451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13830-13928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13238-13300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12749-12873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11703-11850:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10759-10901:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9337-9480:-1:exon

TAF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TAF8
product: TATA-box binding protein associated factor 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021542608.1
SIO_010081: TAF8
subclass of: SO_0000673
so part of: TAF8
location: complement(join(14265..15533,17242..17283))
location: region:14265-17283:-1
so has part: feature:17242-17283:-1:exon
so has part: feature:14265-15533:-1:exon

position:14265:-1
position: 14265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17283:-1
position: 17283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17242-17283:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14265-15533:-1:exon

TAF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TAF8
product: TATA-box binding protein associated factor 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031506977.1
SIO_010081: TAF8
subclass of: SO_0000673
so part of: TAF8
location: complement(join(14265..15783,15825..15970))
location: region:14265-15970:-1
so has part: feature:15825-15970:-1:exon
so has part: feature:14265-15783:-1:exon

position:15970:-1
position: 15970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15825-15970:-1:exon

position:15825:-1
position: 15825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14265-15783:-1:exon

position:15783:-1
position: 15783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TAF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 8 isoform X2
translation: MADTASGGSGTRGAKAAGSPADNYQLARRRTLQVVVSSLLTEAGFESAEKAAVETLTEMIQSCECPPGMAGLPPGWDPHFHAVSALGDSSRSSRGRPGVTPGVNPRDRHQIHGKNPRDQLQIHGKNPKDQPQIVAKIPKIVPKSWHKSQRSAPNHGKNPKDQLEIVVKIPKIGCKLWQKSQRLAPNPWHKSQRSAPNCGKNPKDRPQIRDTNPKDWLPVHGTNPKNQLPIRGTNAKDQPQIQGTNPWNQPQIPKINPNPGHKSQKSAPSPSHKSLESAPNAQNQPQSKAPVPKISPQSIAPIPKISPQSLESAPIQGTNPWNQPQIPKISPKPRHQSQKSAPNPGISPNPRHQCHIQSFCKKKQNTFPISSLNFPRPFRAEKNFSFQGKKFQFPFES
SIO_010081: TAF8
subclass of: SO_0000673
so part of: TAF8
location: complement(join(14373..15533,17242..17274))
location: region:14373-17274:-1
so has part: feature:17242-17274:-1:exon
so has part: feature:14373-15533:-1:exon

XP_021398283.1
type: Protein
SIO_000068: ncbiprotein

position:14373:-1
position: 14373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17274:-1
position: 17274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17242-17274:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14373-15533:-1:exon

TAF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TAF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 8 isoform X3
translation: MVPVVPFPPFPFRQRGAKAAGSPADNYQLARRRTLQVVVSSLLTEAGFESAEKAAVETLTEMIQSCECPPGMAGLPPGWDPHFHAVSALGDSSRSSRGRPGVTPGVNPRDRHQIHGKNPRDQLQIHGKNPKDQPQIVAKIPKIVPKSWHKSQRSAPNHGKNPKDQLEIVVKIPKIGCKLWQKSQRLAPNPWHKSQRSAPNCGKNPKDRPQIRDTNPKDWLPVHGTNPKNQLPIRGTNAKDQPQIQGTNPWNQPQIPKINPNPGHKSQKSAPSPSHKSLESAPNAQNQPQSKAPVPKISPQSIAPIPKISPQSLESAPIQGTNPWNQPQIPKISPKPRHQSQKSAPNPGISPNPRHQCHIQSFCKKKQNTFPISSLNFPRPFRAEKNFSFQGKKFQFPFES
SIO_010081: TAF8
subclass of: SO_0000673
so part of: TAF8
location: complement(14373..15575)
location: region:14373-15575:-1
so has part: feature:14373-15575:-1:exon

XP_031362837.1
type: Protein
SIO_000068: ncbiprotein

position:15575:-1
position: 15575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14373-15575:-1:exon

LOC110477144
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110477144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 21406..29668
location: region:21406-29668:1
so has part: feature:21406-29668:1:exon
subclass of: SO_0000011

110477144
type: Gene
SIO_000068: ncbigene

position:21406:1
position: 21406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29668:1
position: 29668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21406-29668:1:exon

LOC110477144
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110477144
product: uncharacterized LOC110477144
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_002466537.1
SIO_010081: LOC110477144
subclass of: SO_0000673
so part of: LOC110477144
location: join(21406..21439,22207..22256,26543..26648,29351..29668)
location: region:21406-29668:1
so has part: feature:21406-21439:1:exon
so has part: feature:22207-22256:1:exon
so has part: feature:26543-26648:1:exon
so has part: feature:29351-29668:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21406-21439:1:exon

position:21439:1
position: 21439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22207-22256:1:exon

position:22207:1
position: 22207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22256:1
position: 22256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:26543-26648:1:exon

position:26543:1
position: 26543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26648:1
position: 26648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:29351-29668:1:exon

position:29351:1
position: 29351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCND3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CCND3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 33234..47133
location: region:33234-47133:1
so has part: feature:33234-47133:1:exon
subclass of: SO_0000010

110477163
type: Gene
SIO_000068: ncbigene

position:33234:1
position: 33234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47133:1
position: 47133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33234-47133:1:exon

CCND3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CCND3
product: cyclin D3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021542629.1
SIO_010081: CCND3
subclass of: SO_0000673
so part of: CCND3
location: join(33234..33431,34620..34835,42456..42615,43541..43674,46943..47133)
location: region:33234-47133:1
so has part: feature:33234-33431:1:exon
so has part: feature:34620-34835:1:exon
so has part: feature:42456-42615:1:exon
so has part: feature:43541-43674:1:exon
so has part: feature:46943-47133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33234-33431:1:exon

position:33431:1
position: 33431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34620-34835:1:exon

position:34620:1
position: 34620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34835:1
position: 34835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:42456-42615:1:exon

position:42456:1
position: 42456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42615:1
position: 42615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:43541-43674:1:exon

position:43541:1
position: 43541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43674:1
position: 43674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:46943-47133:1:exon

position:46943:1
position: 46943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CCND3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G1/S-specific cyclin-D3
translation: MELLCAESAPRAPRAGRDPQLLGDRRVLQNLLSLEERYSPRVSYFQCVQRDIQPYMRKMLAFWMLEVCEEQKCEEEVFPLAMNYVDRYLSSVAVQKNHLQLLGAVCMLLASKLRETMPLTVEKLCIYTDNSITPQELLNWELLVLEKLKWDLVSVIANDFLPHILHQLPLPLDKVELVKKHAQTFIALCATDDTFVMYPPSMIATGSIGAAVHGLSLPGSGDAVTELLAGTTGTEVDCLKACQEQIEAALAESLKQASQSQQELSNKSPAYGGSQPTSTPTDVTDVNL
SIO_010081: CCND3
subclass of: SO_0000673
so part of: CCND3
location: join(33234..33431,34620..34835,42456..42615,43541..43674,46943..47101)
location: region:33234-47101:1
so has part: feature:33234-33431:1:exon
so has part: feature:34620-34835:1:exon
so has part: feature:42456-42615:1:exon
so has part: feature:43541-43674:1:exon
so has part: feature:46943-47101:1:exon

XP_021398304.1
type: Protein
SIO_000068: ncbiprotein

position:47101:1
position: 47101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33234-33431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34620-34835:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42456-42615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43541-43674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46943-47101:1:exon

BYSL
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: BYSL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(49724..53667)
location: region:49724-53667:-1
so has part: feature:49724-53667:-1:exon
subclass of: SO_0000010

110477153
type: Gene
SIO_000068: ncbigene

position:49724:-1
position: 49724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53667:-1
position: 53667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49724-53667:-1:exon

BYSL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: BYSL
product: bystin like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021542620.1
SIO_010081: BYSL
subclass of: SO_0000673
so part of: BYSL
location: complement(join(49724..50532,51562..51664,51927..52087,52225..52358,52470..52608,53170..53326,53400..53667))
location: region:49724-53667:-1
so has part: feature:53400-53667:-1:exon
so has part: feature:53170-53326:-1:exon
so has part: feature:52470-52608:-1:exon
so has part: feature:52225-52358:-1:exon
so has part: feature:51927-52087:-1:exon
so has part: feature:51562-51664:-1:exon
so has part: feature:49724-50532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53400-53667:-1:exon

position:53400:-1
position: 53400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53170-53326:-1:exon

position:53170:-1
position: 53170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53326:-1
position: 53326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:52470-52608:-1:exon

position:52470:-1
position: 52470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52608:-1
position: 52608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:52225-52358:-1:exon

position:52225:-1
position: 52225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52358:-1
position: 52358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51927-52087:-1:exon

position:51927:-1
position: 51927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52087:-1
position: 52087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:51562-51664:-1:exon

position:51562:-1
position: 51562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51664:-1
position: 51664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:49724-50532:-1:exon

position:50532:-1
position: 50532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BYSL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: BYSL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bystin
translation: MPKARRARGSGPAPALPLAEQILQDAAPRVRERRGAAAEEPGGDGGGDGFVDARLSRRILEQARRQQEELEAEHGPGAPAAPRQRSAVLAPGSDSEDEEEWPSLEKAAAAAGRSGDYGGEVEVDPEDEKAIEMFMNKNPPLRRTLADIIMEKITEKQTEVETALSELSGCPMPQLDPRVLEVYRGVREVLSKYRSGKLPKAFKIIPALSNWEQILYITEPETWTAAAMYQATRIFSSNLKERMAQRFYNLVLLPRIRDDIAEYKRLNFHLYMALKKALFKPAAWFKGILIPLCESGTCTLREAIIIGSILTKCSIPVLHSSAALLKLAEMQYSGANSIFLRLLIDKKYALPFRVLDALVFHFLAFRTEQRLLPVLWHQSLLALAQRYKEDLSSEQKEALLELLKFHSHPQISPEIRRELMNSKTRDVEGEQPAAME
SIO_010081: BYSL
subclass of: SO_0000673
so part of: BYSL
location: complement(join(50184..50532,51562..51664,51927..52087,52225..52358,52470..52608,53170..53326,53400..53667))
location: region:50184-53667:-1
so has part: feature:53400-53667:-1:exon
so has part: feature:53170-53326:-1:exon
so has part: feature:52470-52608:-1:exon
so has part: feature:52225-52358:-1:exon
so has part: feature:51927-52087:-1:exon
so has part: feature:51562-51664:-1:exon
so has part: feature:50184-50532:-1:exon

XP_021398295.1
type: Protein
SIO_000068: ncbiprotein

position:50184:-1
position: 50184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53400-53667:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53170-53326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52470-52608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52225-52358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51927-52087:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51562-51664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50184-50532:-1:exon

MED20
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MED20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 53778..57695
location: region:53778-57695:1
so has part: feature:53778-57695:1:exon
subclass of: SO_0000010

110477145
type: Gene
SIO_000068: ncbigene

position:53778:1
position: 53778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57695:1
position: 57695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53778-57695:1:exon

MED20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MED20
product: mediator complex subunit 20, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021542611.2
SIO_010081: MED20
subclass of: SO_0000673
so part of: MED20
location: join(53778..53813,54526..54677,55443..55696,56711..57695)
location: region:53778-57695:1
so has part: feature:53778-53813:1:exon
so has part: feature:54526-54677:1:exon
so has part: feature:55443-55696:1:exon
so has part: feature:56711-57695:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53778-53813:1:exon

position:53813:1
position: 53813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:54526-54677:1:exon

position:54526:1
position: 54526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54677:1
position: 54677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:55443-55696:1:exon

position:55443:1
position: 55443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55696:1
position: 55696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:56711-57695:1:exon

position:56711:1
position: 56711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MED20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MED20
product: mediator complex subunit 20, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021542612.2
SIO_010081: MED20
subclass of: SO_0000673
so part of: MED20
location: join(53789..53813,55443..55696,56711..57695)
location: region:53789-57695:1
so has part: feature:53789-53813:1:exon
so has part: feature:55443-55696:1:exon
so has part: feature:56711-57695:1:exon

position:53789:1
position: 53789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53789-53813:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55443-55696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:56711-57695:1:exon

MED20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MED20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 20 isoform X1
translation: MGVTCVSQVPVAEGKSVQQTVELLARRLEALGADKQGTFGVDCETYHTAAALGTQGQTGKLMYVMHNSEYPLSCFALFENGPCLVADTNFDTLMVKLKGFFQNAKANKIESRGTRYQYCDFLVKLGTVTMGPSARGISVEVEYCPCVIANDCWNLLMEFMQSFMGSHTPGVPPVFSSKHDSTYSPGDTMVQYMELFNKIRKQQQVPVAGIR
SIO_010081: MED20
subclass of: SO_0000673
so part of: MED20
location: join(53800..53813,54526..54677,55443..55696,56711..56926)
location: region:53800-56926:1
so has part: feature:53800-53813:1:exon
so has part: feature:54526-54677:1:exon
so has part: feature:55443-55696:1:exon
so has part: feature:56711-56926:1:exon

XP_021398286.1
type: Protein
SIO_000068: ncbiprotein

position:53800:1
position: 53800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56926:1
position: 56926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53800-53813:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54526-54677:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55443-55696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56711-56926:1:exon

MED20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MED20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 20 isoform X2
translation: MYVMHNSEYPLSCFALFENGPCLVADTNFDTLMVKLKGFFQNAKANKIESRGTRYQYCDFLVKLGTVTMGPSARGISVEVEYCPCVIANDCWNLLMEFMQSFMGSHTPGVPPVFSSKHDSTYSPGDTMVQYMELFNKIRKQQQVPVAGIR
SIO_010081: MED20
subclass of: SO_0000673
so part of: MED20
location: join(55460..55696,56711..56926)
location: region:55460-56926:1
so has part: feature:55460-55696:1:exon
so has part: feature:56711-56926:1:exon

XP_021398287.1
type: Protein
SIO_000068: ncbiprotein

position:55460:1
position: 55460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55460-55696:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56711-56926:1:exon

LOC116184497
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184497
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(57529..60992)
location: region:57529-60992:-1
so has part: feature:57529-60992:-1:exon
subclass of: SO_0000011

116184497
type: Gene
SIO_000068: ncbigene

position:57529:-1
position: 57529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60992:-1
position: 60992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57529-60992:-1:exon

LOC116184497
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184497
product: uncharacterized LOC116184497, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004149253.1
SIO_010081: LOC116184497
subclass of: SO_0000673
so part of: LOC116184497
location: complement(join(57529..59071,60905..60948))
location: region:57529-60948:-1
so has part: feature:60905-60948:-1:exon
so has part: feature:57529-59071:-1:exon

position:60948:-1
position: 60948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60905-60948:-1:exon

position:60905:-1
position: 60905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57529-59071:-1:exon

position:59071:-1
position: 59071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116184497
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184497
product: uncharacterized LOC116184497, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004149254.1
SIO_010081: LOC116184497
subclass of: SO_0000673
so part of: LOC116184497
location: complement(join(57593..57779,60905..60992))
location: region:57593-60992:-1
so has part: feature:60905-60992:-1:exon
so has part: feature:57593-57779:-1:exon

position:57593:-1
position: 57593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60905-60992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57593-57779:-1:exon

position:57779:-1
position: 57779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110477146
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110477146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 61435..64604
location: region:61435-64604:1
so has part: feature:61435-64604:1:exon
subclass of: SO_0000010

110477146
type: Gene
SIO_000068: ncbigene

position:61435:1
position: 61435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64604:1
position: 64604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61435-64604:1:exon

LOC110477146
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110477146
product: mediator of RNA polymerase II transcription subunit 20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021542613.2
SIO_010081: LOC110477146
subclass of: SO_0000673
so part of: LOC110477146
location: join(61435..61585,62351..62604,63620..64604)
location: region:61435-64604:1
so has part: feature:61435-61585:1:exon
so has part: feature:62351-62604:1:exon
so has part: feature:63620-64604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61435-61585:1:exon

position:61585:1
position: 61585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:62351-62604:1:exon

position:62351:1
position: 62351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62604:1
position: 62604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:63620-64604:1:exon

position:63620:1
position: 63620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110477146
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110477146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 20
translation: MYVMHNSEYPLSCFALFENGPCLVADTNFDTLMVKLKGFFQNAKANKIESRGTRYQYCDFLVKLGTVTMGPSARGISVEVEYCPCVIANDCWNLLMEFMQSFMGSHTPGVPPVFSSKHDSTYSPGDTMVQYMELFNKIRKQQQVPVAGIR
SIO_010081: LOC110477146
subclass of: SO_0000673
so part of: LOC110477146
location: join(62368..62604,63620..63835)
location: region:62368-63835:1
so has part: feature:62368-62604:1:exon
so has part: feature:63620-63835:1:exon

XP_021398288.1
type: Protein
SIO_000068: ncbiprotein

position:62368:1
position: 62368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63835:1
position: 63835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62368-62604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63620-63835:1:exon

LOC116184498
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184498
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(64438..67900)
location: region:64438-67900:-1
so has part: feature:64438-67900:-1:exon
subclass of: SO_0000011

116184498
type: Gene
SIO_000068: ncbigene

position:64438:-1
position: 64438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67900:-1
position: 67900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64438-67900:-1:exon

LOC116184498
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184498
product: uncharacterized LOC116184498, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004149255.1
SIO_010081: LOC116184498
subclass of: SO_0000673
so part of: LOC116184498
location: complement(join(64438..65980,67813..67856))
location: region:64438-67856:-1
so has part: feature:67813-67856:-1:exon
so has part: feature:64438-65980:-1:exon

position:67856:-1
position: 67856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67813-67856:-1:exon

position:67813:-1
position: 67813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64438-65980:-1:exon

position:65980:-1
position: 65980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116184498
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184498
product: uncharacterized LOC116184498, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004149256.1
SIO_010081: LOC116184498
subclass of: SO_0000673
so part of: LOC116184498
location: complement(join(64502..64688,67813..67900))
location: region:64502-67900:-1
so has part: feature:67813-67900:-1:exon
so has part: feature:64502-64688:-1:exon

position:64502:-1
position: 64502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67813-67900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64502-64688:-1:exon

position:64688:-1
position: 64688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

USP49
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: USP49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 68166..94986
location: region:68166-94986:1
so has part: feature:68166-94986:1:exon
subclass of: SO_0000010

110477154
type: Gene
SIO_000068: ncbigene

position:68166:1
position: 68166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94986:1
position: 94986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68166-94986:1:exon

USP49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: USP49
product: ubiquitin specific peptidase 49
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021542621.1
SIO_010081: USP49
subclass of: SO_0000673
so part of: USP49
location: join(68166..68229,82436..82552,84142..85519,87157..87361,89005..89113,91249..91454,93895..94028,94957..94986)
location: region:68166-94986:1
so has part: feature:68166-68229:1:exon
so has part: feature:82436-82552:1:exon
so has part: feature:84142-85519:1:exon
so has part: feature:87157-87361:1:exon
so has part: feature:89005-89113:1:exon
so has part: feature:91249-91454:1:exon
so has part: feature:93895-94028:1:exon
so has part: feature:94957-94986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68166-68229:1:exon

position:68229:1
position: 68229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82436-82552:1:exon

position:82436:1
position: 82436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82552:1
position: 82552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:84142-85519:1:exon

position:84142:1
position: 84142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85519:1
position: 85519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87157-87361:1:exon

position:87157:1
position: 87157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87361:1
position: 87361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:89005-89113:1:exon

position:89005:1
position: 89005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89113:1
position: 89113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91249-91454:1:exon

position:91249:1
position: 91249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91454:1
position: 91454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:93895-94028:1:exon

position:93895:1
position: 93895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94028:1
position: 94028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:94957-94986:1:exon

position:94957:1
position: 94957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

USP49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: USP49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 49
translation: MDRCKHVGRLRLAQDHSILNPQKWQCVECHTTESLWACLKCSHVACGRYIEEHALRHFQETQHPLAMEVHELYVFCYLCQDYVLNDNPEGDLKLLRSSLVAIKGQRGGRTLRSTALPEDSWRRRSPQGQSQMLTALWHRRQALLARALRTWFHKSSRGQLKLKEKKQMEELEKKKEAARQRRQEMKRQLLEELASTPPRKSARLLSHVHGESLIPRKFREVATASPTSRQVQSSRLKQFYSIRRQPLMTPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLTLDLCETEELLAKTVNGRARMPGRLANGAAAHEPGKPDKAGTQSSPPGLNGGSSISRSLELIQPKEPSSKHISLCHELHTLFRVMWSGKWALVSPFAMLHSVWSLIPAFRGYDQQDAQEFLCELLDKVQQELESEGSKRRILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCTTCNYKSNTVEPFWDLSLEFPERYHALEKGLLPVAQAECLLTEMLAKFTETEALEGRIYACDQCNSKRRKSSPKPLVLSEAKKQLLIYRLPQVLRLHLKRFRWSERKHREKIGVHVLFEQVLNMEPYCCRDSEPSLASGTCVYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCRTQAYILFYTQRAPHRAGIPQERLQLQEELAQDP
SIO_010081: USP49
subclass of: SO_0000673
so part of: USP49
location: join(84167..85519,87157..87361,89005..89113,91249..91454,93895..94028,94957..94986)
location: region:84167-94986:1
so has part: feature:84167-85519:1:exon
so has part: feature:87157-87361:1:exon
so has part: feature:89005-89113:1:exon
so has part: feature:91249-91454:1:exon
so has part: feature:93895-94028:1:exon
so has part: feature:94957-94986:1:exon

XP_021398296.1
type: Protein
SIO_000068: ncbiprotein

position:84167:1
position: 84167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84167-85519:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87157-87361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89005-89113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91249-91454:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93895-94028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94957-94986:1:exon

TOMM6
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TOMM6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(98225..100204)
location: region:98225-100204:-1
so has part: feature:98225-100204:-1:exon
subclass of: SO_0000010

110477155
type: Gene
SIO_000068: ncbigene

position:98225:-1
position: 98225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100204:-1
position: 100204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98225-100204:-1:exon

TOMM6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TOMM6
product: translocase of outer mitochondrial membrane 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031506933.1
SIO_010081: TOMM6
subclass of: SO_0000673
so part of: TOMM6
location: complement(join(98225..98394,99151..99252,100080..100204))
location: region:98225-100204:-1
so has part: feature:100080-100204:-1:exon
so has part: feature:99151-99252:-1:exon
so has part: feature:98225-98394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100080-100204:-1:exon

position:100080:-1
position: 100080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99151-99252:-1:exon

position:99151:-1
position: 99151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99252:-1
position: 99252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:98225-98394:-1:exon

position:98394:-1
position: 98394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TOMM6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TOMM6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import receptor subunit TOM6 homolog
translation: MAAAAAAGPGAAGAAGAAPARGVRAWLRSAFRFATDRNDFRRNLLLNLGLFAAGVWVARNLTDIDLMAPQPGP
SIO_010081: TOMM6
subclass of: SO_0000673
so part of: TOMM6
location: complement(join(99156..99252,100080..100204))
location: region:99156-100204:-1
so has part: feature:100080-100204:-1:exon
so has part: feature:99156-99252:-1:exon

XP_031362793.1
type: Protein
SIO_000068: ncbiprotein

position:99156:-1
position: 99156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100080-100204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99156-99252:-1:exon

PRICKLE4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PRICKLE4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<114857..123210)
location: region:114857-123210:-1
so has part: feature:114857-123210:-1:exon
subclass of: SO_0000010

110477156
type: Gene
SIO_000068: ncbigene

position:114857:-1
position: 114857
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:123210:-1
position: 123210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114857-123210:-1:exon

PRICKLE4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PRICKLE4
product: prickle planar cell polarity protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506934.1
SIO_010081: PRICKLE4
subclass of: SO_0000673
so part of: PRICKLE4
location: complement(join(<114857..115021,115208..115408,115500..115637,116130..116237,116361..116513,120138..120256,122922..123210))
location: region:114857-123210:-1
so has part: feature:122922-123210:-1:exon
so has part: feature:120138-120256:-1:exon
so has part: feature:116361-116513:-1:exon
so has part: feature:116130-116237:-1:exon
so has part: feature:115500-115637:-1:exon
so has part: feature:115208-115408:-1:exon
so has part: feature:114857-115021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122922-123210:-1:exon

position:122922:-1
position: 122922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:120138-120256:-1:exon

position:120138:-1
position: 120138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120256:-1
position: 120256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116361-116513:-1:exon

position:116361:-1
position: 116361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116513:-1
position: 116513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:116130-116237:-1:exon

position:116130:-1
position: 116130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116237:-1
position: 116237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:115500-115637:-1:exon

position:115500:-1
position: 115500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115637:-1
position: 115637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:115208-115408:-1:exon

position:115208:-1
position: 115208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115408:-1
position: 115408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:114857-115021:-1:exon

position:115021:-1
position: 115021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRICKLE4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PRICKLE4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prickle-like protein 4
translation: MPRPRSRRGSVPEALPAPPSGKLRRPGAPGPALPGARSVSGPPARPCPRPARRLRGSRWGPERSGPGRARRSSDTARAAARGRRGAPGAEQEGRGLGSVRSRPPEQGGTAAAGAGLERAAEPGAAERGARSAGKGQLMSLPSPAWPQQDEPSPCGTSTGLPPASSDSDSGCALEEYLEPPADPAPPEVPPCFGPRAPQPGSPSDRTRLRARALLQQLPPQDCDERYCPDLAEEERRQLRAFSARRRQEALGQGLACPVPGPCHGCPCRKCGRRLNKGDPGVSASRLGDQFWHPSCFSCHFCHQQLVDLIYFQQDGRIYCGRHHAELFRPRCASCDQLIFMEECIEAEGRRWHLEHFCCLECDEPLRGQRYVMRSGRPCCRGCFESLFAEPC
SIO_010081: PRICKLE4
subclass of: SO_0000673
so part of: PRICKLE4
location: complement(join(<114857..115021,115208..115408,115500..115637,116130..116237,116361..116513,120138..120256,122922..123210))
location: region:114857-123210:-1
so has part: feature:122922-123210:-1:exon
so has part: feature:120138-120256:-1:exon
so has part: feature:116361-116513:-1:exon
so has part: feature:116130-116237:-1:exon
so has part: feature:115500-115637:-1:exon
so has part: feature:115208-115408:-1:exon
so has part: feature:114857-115021:-1:exon

XP_031362794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122922-123210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120138-120256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:116361-116513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:116130-116237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115500-115637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:115208-115408:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:114857-115021:-1:exon

FRS3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 123079..134509
location: region:123079-134509:1
so has part: feature:123079-134509:1:exon
subclass of: SO_0000010

110477164
type: Gene
SIO_000068: ncbigene

position:123079:1
position: 123079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134509:1
position: 134509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123079-134509:1:exon

FRS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FRS3
product: fibroblast growth factor receptor substrate 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021542631.1
SIO_010081: FRS3
subclass of: SO_0000673
so part of: FRS3
location: join(123079..123176,126830..126959,127110..127198,131278..131464,132378..132539,132622..132773,133599..134509)
location: region:123079-134509:1
so has part: feature:123079-123176:1:exon
so has part: feature:126830-126959:1:exon
so has part: feature:127110-127198:1:exon
so has part: feature:131278-131464:1:exon
so has part: feature:132378-132539:1:exon
so has part: feature:132622-132773:1:exon
so has part: feature:133599-134509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123079-123176:1:exon

position:123176:1
position: 123176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:126830-126959:1:exon

position:126830:1
position: 126830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126959:1
position: 126959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:127110-127198:1:exon

position:127110:1
position: 127110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127198:1
position: 127198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:131278-131464:1:exon

position:131278:1
position: 131278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131464:1
position: 131464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132378-132539:1:exon

position:132378:1
position: 132378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132539:1
position: 132539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:132622-132773:1:exon

position:132622:1
position: 132622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132773:1
position: 132773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:133599-134509:1:exon

position:133599:1
position: 133599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FRS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor receptor substrate 3
translation: MSSLPGVMGSCCSCLCSDSIPDNHPTKFKVTNVDDEGQELGSGVLELAPGELVLHSHKRDAVRWPYLCLRRYGFDANLFSFESGRRCRTGQGIFAFKCSRAEEIFNLLQELMQCNSINVVEEPVVITRSSHPSERELPRSPQGPTSLGYTGLPNGFHSFPGESLSYSAGQHPSVSSLRHSSVGEDSTHPLLGPEEQSHTYVNTGEPEPRGRHCVHSLPEAHPPFPPRNHSCSLEDRNPQVFLQPGEAKFVLAPSSGCRRPCPQRRPHLCPPNNNNNECQEGCPSPQCVYENLNGLVAPSTSSLSRSKASQEDGSCCQRRSALLHYENLPALPPLWELQPARQGHEDAGMAPTPSPNGFSEAGEEEPLQSSAASQPRRAFLPRARRSRLPNVFSFDFPRPCPEPPRQLNYIQVELEPEPCPGRQEPRASPGARRANSYAIIDLKKTAAMSSLQRALPRDDGTSRKTRHNSTDLPL
SIO_010081: FRS3
subclass of: SO_0000673
so part of: FRS3
location: join(127112..127198,131278..131464,132378..132539,132622..132773,133599..134435)
location: region:127112-134435:1
so has part: feature:127112-127198:1:exon
so has part: feature:131278-131464:1:exon
so has part: feature:132378-132539:1:exon
so has part: feature:132622-132773:1:exon
so has part: feature:133599-134435:1:exon

XP_021398306.1
type: Protein
SIO_000068: ncbiprotein

position:127112:1
position: 127112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134435:1
position: 134435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127112-127198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131278-131464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132378-132539:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132622-132773:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:133599-134435:1:exon

PGC
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PGC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 145591..157503
location: region:145591-157503:1
so has part: feature:145591-157503:1:exon
subclass of: SO_0000010

110477157
type: Gene
SIO_000068: ncbigene

position:145591:1
position: 145591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157503:1
position: 157503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145591-157503:1:exon

PGC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PGC
product: progastricsin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506976.1
SIO_010081: PGC
subclass of: SO_0000673
so part of: PGC
location: join(145591..145646,147075..147191,152893..153065,154204..154322,154516..154715,155718..155840,155953..156101,157265..157503)
location: region:145591-157503:1
so has part: feature:145591-145646:1:exon
so has part: feature:147075-147191:1:exon
so has part: feature:152893-153065:1:exon
so has part: feature:154204-154322:1:exon
so has part: feature:154516-154715:1:exon
so has part: feature:155718-155840:1:exon
so has part: feature:155953-156101:1:exon
so has part: feature:157265-157503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145591-145646:1:exon

position:145646:1
position: 145646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147075-147191:1:exon

position:147075:1
position: 147075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147191:1
position: 147191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:152893-153065:1:exon

position:152893:1
position: 152893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153065:1
position: 153065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:154204-154322:1:exon

position:154204:1
position: 154204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154322:1
position: 154322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:154516-154715:1:exon

position:154516:1
position: 154516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154715:1
position: 154715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:155718-155840:1:exon

position:155718:1
position: 155718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155840:1
position: 155840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:155953-156101:1:exon

position:155953:1
position: 155953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156101:1
position: 156101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:157265-157503:1:exon

position:157265:1
position: 157265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PGC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PGC
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:157327..157329,aa:OTHER)
product: LOW QUALITY PROTEIN: gastricsin
translation: MKWLPVVLACLQLAEGAVRISLKKGLSIRDRMRAAGLLDDFLRRLRHDPVKKYQPGPGCCVPEPVASGNSLFFFFQSSYFGEISIGEPPQKFLVLFDTGSSNLWVPSTDCKSPACFNHAKFKPGDSATFSPGGRSCTVSYGSGSVTIVLGWDTLRIQSITVTQQELGLSQDEPTQPFYFADFDGILGMAFPSLAVGGTATALGAMLEQEQLAEPLFSFYFSRHPTYEYGGELILGGIDPGLFQGDITWAPVTQKLYWQVALEEFAIGQSVTSWCSQGCQAIVDTGTFLLTVPQQYLESILEALGAQETSYGVNPEHSRGIPGKSPELRGRQPCXAPVLPPQSNGYCTLAIEGTYLPSQDGQPLWILGNVFLQEYYTAFDMANSRVGFAPSA
SIO_010081: PGC
subclass of: SO_0000673
so part of: PGC
location: join(145591..145646,147075..147191,152893..153065,154204..154322,154516..154715,155718..155840,155953..156101,157265..157503)
location: region:145591-157503:1
so has part: feature:145591-145646:1:exon
so has part: feature:147075-147191:1:exon
so has part: feature:152893-153065:1:exon
so has part: feature:154204-154322:1:exon
so has part: feature:154516-154715:1:exon
so has part: feature:155718-155840:1:exon
so has part: feature:155953-156101:1:exon
so has part: feature:157265-157503:1:exon

XP_031362836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145591-145646:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147075-147191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152893-153065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:154204-154322:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:154516-154715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:155718-155840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155953-156101:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:157265-157503:1:exon

TFEB
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TFEB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 178945..185708
location: region:178945-185708:1
so has part: feature:178945-185708:1:exon
subclass of: SO_0000010

110477158
type: Gene
SIO_000068: ncbigene

position:178945:1
position: 178945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185708:1
position: 185708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178945-185708:1:exon

TFEB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TFEB
product: transcription factor EB
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021542625.1
SIO_010081: TFEB
subclass of: SO_0000673
so part of: TFEB
location: join(178945..179013,183345..183465,183590..183684,184870..185708)
location: region:178945-185708:1
so has part: feature:178945-179013:1:exon
so has part: feature:183345-183465:1:exon
so has part: feature:183590-183684:1:exon
so has part: feature:184870-185708:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178945-179013:1:exon

position:179013:1
position: 179013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183345-183465:1:exon

position:183345:1
position: 183345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183465:1
position: 183465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:183590-183684:1:exon

position:183590:1
position: 183590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183684:1
position: 183684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:184870-185708:1:exon

position:184870:1
position: 184870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TFEB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TFEB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor EB
translation: MHGVMLLRGCTWCCYCEDARGDALPMSSSHINVYSGDPQVTASLVGVTSSSCPADLTQKRELTDAESRALAKERQKKDNHNLSEFSSSFPSPDPTSPYHQLDFTHSLSFEDGSQGFPDSASFPSLSKKELDLMLLQDTMLPLASDPLFSAMSPEASKGSSRRSSFSMEDADML
SIO_010081: TFEB
subclass of: SO_0000673
so part of: TFEB
location: join(178945..179013,183345..183465,183590..183684,184870..185106)
location: region:178945-185106:1
so has part: feature:178945-179013:1:exon
so has part: feature:183345-183465:1:exon
so has part: feature:183590-183684:1:exon
so has part: feature:184870-185106:1:exon

XP_021398300.1
type: Protein
SIO_000068: ncbiprotein

position:185106:1
position: 185106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178945-179013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183345-183465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183590-183684:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:184870-185106:1:exon

FOXP4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FOXP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(240162..301164)
location: region:240162-301164:-1
so has part: feature:240162-301164:-1:exon
subclass of: SO_0000010

110477165
type: Gene
SIO_000068: ncbigene

position:240162:-1
position: 240162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301164:-1
position: 301164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240162-301164:-1:exon

FOXP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FOXP4
product: forkhead box P4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021542632.1
SIO_010081: FOXP4
subclass of: SO_0000673
so part of: FOXP4
location: complement(join(240162..241106,242459..242625,243083..243149,243256..243377,248663..248764,248892..248968,249066..249267,250523..250612,252231..252318,254974..255078,255321..255525,256481..256628,262647..262733,264345..264467,272201..272290,279907..280114,301063..301164))
location: region:240162-301164:-1
so has part: feature:301063-301164:-1:exon
so has part: feature:279907-280114:-1:exon
so has part: feature:272201-272290:-1:exon
so has part: feature:264345-264467:-1:exon
so has part: feature:262647-262733:-1:exon
so has part: feature:256481-256628:-1:exon
so has part: feature:255321-255525:-1:exon
so has part: feature:254974-255078:-1:exon
so has part: feature:252231-252318:-1:exon
so has part: feature:250523-250612:-1:exon
so has part: feature:249066-249267:-1:exon
so has part: feature:248892-248968:-1:exon
so has part: feature:248663-248764:-1:exon
so has part: feature:243256-243377:-1:exon
so has part: feature:243083-243149:-1:exon
so has part: feature:242459-242625:-1:exon
so has part: feature:240162-241106:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:301063-301164:-1:exon

position:301063:-1
position: 301063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279907-280114:-1:exon

position:279907:-1
position: 279907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280114:-1
position: 280114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:272201-272290:-1:exon

position:272201:-1
position: 272201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272290:-1
position: 272290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:264345-264467:-1:exon

position:264345:-1
position: 264345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264467:-1
position: 264467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:262647-262733:-1:exon

position:262647:-1
position: 262647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262733:-1
position: 262733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:256481-256628:-1:exon

position:256481:-1
position: 256481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256628:-1
position: 256628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:255321-255525:-1:exon

position:255321:-1
position: 255321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255525:-1
position: 255525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:254974-255078:-1:exon

position:254974:-1
position: 254974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255078:-1
position: 255078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:252231-252318:-1:exon

position:252231:-1
position: 252231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252318:-1
position: 252318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:250523-250612:-1:exon

position:250523:-1
position: 250523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250612:-1
position: 250612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:249066-249267:-1:exon

position:249066:-1
position: 249066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249267:-1
position: 249267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:248892-248968:-1:exon

position:248892:-1
position: 248892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248968:-1
position: 248968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:248663-248764:-1:exon

position:248663:-1
position: 248663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248764:-1
position: 248764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:243256-243377:-1:exon

position:243256:-1
position: 243256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243377:-1
position: 243377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:243083-243149:-1:exon

position:243083:-1
position: 243083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243149:-1
position: 243149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:242459-242625:-1:exon

position:242459:-1
position: 242459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242625:-1
position: 242625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:240162-241106:-1:exon

position:241106:-1
position: 241106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FOXP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FOXP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein P4
translation: MMVESASETIRSTPAAQNGVSSLSNQPDGAGPGPGPGGGRDGAAGAEANGEMSPVELLHFQQQQALQVARQFLLQQATGLSSPSSNEGKQPAVQVPVSVAMMSPQMITPQQMQQILSPPQLQALLQQQQAIMLQQLQEYYKKQQEQLHLQLLTQQQAGKQQPKEPLGNKQLAFQQQLLQMQQLQQQHLLNLQRQGLVSLPPGQGTVPLQTLPQAVCPSDLQQLWKEVTAAQPVEDSIKQEGLDLTTNTSNSTSFSAAKVSPPISHHPLPNGQSTMHTPRRDSSSHEETPGSHPLYGHGECKWPGCETLCEDLGQFVKHLNTEHALDDRSTAQCRVQMQVVQQLEIQLAKESERLQAMMAHLHMRPSEPKPFSQPVSLNLVSSATLSKSTSDTFPDGLPHPPTSATAPITPLRQGPSVISSSTLHSVGPIRRRSSEKFCTPISSELAQNHEFYKNADVRPPFTYASLIRQAILETPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEHEYQKRRPPKMTGSPTLVKNMISGLGYGALNASYQAALAESSFPLLSSPTMINTSSASAMLHVGHDDVSSTVEQVNSNGSSSPRLSPQQYSHPVHVKEEPAEAEDDSRPVSLMATTNQNVTIPDDRDLEEELPVEDLS
SIO_010081: FOXP4
subclass of: SO_0000673
so part of: FOXP4
location: complement(join(240962..241106,242459..242625,243083..243149,243256..243377,248663..248764,248892..248968,249066..249267,250523..250612,252231..252318,254974..255078,255321..255525,256481..256628,262647..262733,264345..264467,272201..272290,279907..280098))
location: region:240962-280098:-1
so has part: feature:279907-280098:-1:exon
so has part: feature:272201-272290:-1:exon
so has part: feature:264345-264467:-1:exon
so has part: feature:262647-262733:-1:exon
so has part: feature:256481-256628:-1:exon
so has part: feature:255321-255525:-1:exon
so has part: feature:254974-255078:-1:exon
so has part: feature:252231-252318:-1:exon
so has part: feature:250523-250612:-1:exon
so has part: feature:249066-249267:-1:exon
so has part: feature:248892-248968:-1:exon
so has part: feature:248663-248764:-1:exon
so has part: feature:243256-243377:-1:exon
so has part: feature:243083-243149:-1:exon
so has part: feature:242459-242625:-1:exon
so has part: feature:240962-241106:-1:exon

XP_021398307.1
type: Protein
SIO_000068: ncbiprotein

position:240962:-1
position: 240962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280098:-1
position: 280098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279907-280098:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272201-272290:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264345-264467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262647-262733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256481-256628:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255321-255525:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:254974-255078:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252231-252318:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:250523-250612:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:249066-249267:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:248892-248968:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:248663-248764:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:243256-243377:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:243083-243149:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:242459-242625:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:240962-241106:-1:exon

LOC110477147
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110477147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(310834..311710)
location: region:310834-311710:-1
so has part: feature:310834-311710:-1:exon
subclass of: SO_0000011

110477147
type: Gene
SIO_000068: ncbigene

position:310834:-1
position: 310834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311710:-1
position: 311710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310834-311710:-1:exon

LOC110477147
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110477147
product: uncharacterized LOC110477147
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002466539.1
SIO_010081: LOC110477147
subclass of: SO_0000673
so part of: LOC110477147
location: complement(join(310834..310978,311509..311710))
location: region:310834-311710:-1
so has part: feature:311509-311710:-1:exon
so has part: feature:310834-310978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311509-311710:-1:exon

position:311509:-1
position: 311509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:310834-310978:-1:exon

position:310978:-1
position: 310978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110477148
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110477148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 422042..426261
location: region:422042-426261:1
so has part: feature:422042-426261:1:exon
subclass of: SO_0000010

110477148
type: Gene
SIO_000068: ncbigene

position:422042:1
position: 422042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426261:1
position: 426261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422042-426261:1:exon

LOC110477148
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110477148
product: trem-like transcript 4 protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021542614.1
SIO_010081: LOC110477148
subclass of: SO_0000673
so part of: LOC110477148
location: join(422042..422198,423892..424233,425318..425375,425497..426261)
location: region:422042-426261:1
so has part: feature:422042-422198:1:exon
so has part: feature:423892-424233:1:exon
so has part: feature:425318-425375:1:exon
so has part: feature:425497-426261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:422042-422198:1:exon

position:422198:1
position: 422198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:423892-424233:1:exon

position:423892:1
position: 423892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424233:1
position: 424233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:425318-425375:1:exon

position:425318:1
position: 425318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425375:1
position: 425375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:425497-426261:1:exon

position:425497:1
position: 425497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110477148
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110477148
product: trem-like transcript 4 protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021542616.1
SIO_010081: LOC110477148
subclass of: SO_0000673
so part of: LOC110477148
location: join(422042..422198,423892..424233,425321..425375,425497..426261)
location: region:422042-426261:1
so has part: feature:422042-422198:1:exon
so has part: feature:423892-424233:1:exon
so has part: feature:425321-425375:1:exon
so has part: feature:425497-426261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:422042-422198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423892-424233:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425321-425375:1:exon

position:425321:1
position: 425321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:425497-426261:1:exon

LOC110477148
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110477148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMRF35-like molecule 7 isoform X1
translation: MEKLLHLTLVFLSASCAAENVTVVAAMEGDTVSVNCSYDPRQWWREKSWCRQLDQSRCQRVLSAPPAWLPFPRARRGSTSLRDNARAGLLTVTMGHLRKEDAGLYQCTTEFLGDTKSLRKVRVEVLAAAELVTHVPEEPRAVQSISRSSPDVDFTVFYILAGFLVAKCTVAVLVCAVAHSKKNRERGQNPGPGEQQVLPLPADLGHGGVGLSWESSV
SIO_010081: LOC110477148
subclass of: SO_0000673
so part of: LOC110477148
location: join(422159..422198,423892..424233,425318..425375,425497..425710)
location: region:422159-425710:1
so has part: feature:422159-422198:1:exon
so has part: feature:423892-424233:1:exon
so has part: feature:425318-425375:1:exon
so has part: feature:425497-425710:1:exon

XP_021398289.1
type: Protein
SIO_000068: ncbiprotein

position:422159:1
position: 422159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425710:1
position: 425710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422159-422198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423892-424233:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425318-425375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:425497-425710:1:exon

LOC110477148
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110477148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trem-like transcript 4 protein isoform X2
translation: MEKLLHLTLVFLSASCAAENVTVVAAMEGDTVSVNCSYDPRQWWREKSWCRQLDQSRCQRVLSAPPAWLPFPRARRGSTSLRDNARAGLLTVTMGHLRKEDAGLYQCTTEFLGDTKSLRKVRVEVLAAELVTHVPEEPRAVQSISRSSPDVDFTVFYILAGFLVAKCTVAVLVCAVAHSKKNRERGQNPGPGEQQVLPLPADLGHGGVGLSWESSV
SIO_010081: LOC110477148
subclass of: SO_0000673
so part of: LOC110477148
location: join(422159..422198,423892..424233,425321..425375,425497..425710)
location: region:422159-425710:1
so has part: feature:422159-422198:1:exon
so has part: feature:423892-424233:1:exon
so has part: feature:425321-425375:1:exon
so has part: feature:425497-425710:1:exon

XP_021398291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422159-422198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423892-424233:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425321-425375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:425497-425710:1:exon

NFYA
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: NFYA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(428382..443853)
location: region:428382-443853:-1
so has part: feature:428382-443853:-1:exon
subclass of: SO_0000010

110477166
type: Gene
SIO_000068: ncbigene

position:428382:-1
position: 428382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443853:-1
position: 443853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428382-443853:-1:exon

NFYA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NFYA
product: nuclear transcription factor Y subunit alpha, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021542643.1
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(428382..430998,431755..431856,432396..432569,433570..433736,434176..434281,436895..437041,441222..441309,443744..443853))
location: region:428382-443853:-1
so has part: feature:443744-443853:-1:exon
so has part: feature:441222-441309:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433736:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:428382-430998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443744-443853:-1:exon

position:443744:-1
position: 443744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441222-441309:-1:exon

position:441222:-1
position: 441222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441309:-1
position: 441309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:436895-437041:-1:exon

position:436895:-1
position: 436895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437041:-1
position: 437041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:434176-434281:-1:exon

position:434176:-1
position: 434176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434281:-1
position: 434281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:433570-433736:-1:exon

position:433570:-1
position: 433570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433736:-1
position: 433736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:432396-432569:-1:exon

position:432396:-1
position: 432396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432569:-1
position: 432569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:431755-431856:-1:exon

position:431755:-1
position: 431755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431856:-1
position: 431856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:428382-430998:-1:exon

position:430998:-1
position: 430998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFYA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NFYA
product: nuclear transcription factor Y subunit alpha, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021542641.1
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(428382..430998,431755..431856,432396..432569,433570..433718,434176..434281,434953..435084,436895..437041,441222..441309,443744..443853))
location: region:428382-443853:-1
so has part: feature:443744-443853:-1:exon
so has part: feature:441222-441309:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434953-435084:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433718:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:428382-430998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443744-443853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441222-441309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434953-435084:-1:exon

position:434953:-1
position: 434953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435084:-1
position: 435084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433570-433718:-1:exon

position:433718:-1
position: 433718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428382-430998:-1:exon

NFYA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NFYA
product: nuclear transcription factor Y subunit alpha, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021542640.1
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(428382..430998,431755..431856,432396..432569,433570..433736,434176..434281,434953..435084,436895..437041,441222..441309,443744..443853))
location: region:428382-443853:-1
so has part: feature:443744-443853:-1:exon
so has part: feature:441222-441309:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434953-435084:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433736:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:428382-430998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443744-443853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441222-441309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434953-435084:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433570-433736:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428382-430998:-1:exon

NFYA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NFYA
product: nuclear transcription factor Y subunit alpha, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021542638.1
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(428382..430998,431755..431856,432396..432569,433570..433736,434176..434281,434953..435084,436895..437041,439093..439173,441222..441309,443744..443853))
location: region:428382-443853:-1
so has part: feature:443744-443853:-1:exon
so has part: feature:441222-441309:-1:exon
so has part: feature:439093-439173:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434953-435084:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433736:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:428382-430998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443744-443853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441222-441309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439093-439173:-1:exon

position:439093:-1
position: 439093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439173:-1
position: 439173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434953-435084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:433570-433736:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428382-430998:-1:exon

NFYA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NFYA
product: nuclear transcription factor Y subunit alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021542636.1
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(428382..430998,431755..431856,432396..432569,433570..433736,434176..434281,434953..435084,436895..437041,439090..439173,441222..441309,443744..443853))
location: region:428382-443853:-1
so has part: feature:443744-443853:-1:exon
so has part: feature:441222-441309:-1:exon
so has part: feature:439090-439173:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434953-435084:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433736:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:428382-430998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443744-443853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441222-441309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439090-439173:-1:exon

position:439090:-1
position: 439090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434953-435084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:433570-433736:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428382-430998:-1:exon

NFYA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NFYA
product: nuclear transcription factor Y subunit alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021542637.1
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(428382..430998,431755..431856,432396..432569,433570..433736,434176..434281,434953..435084,436895..437041,439093..439176,441222..441309,443744..443853))
location: region:428382-443853:-1
so has part: feature:443744-443853:-1:exon
so has part: feature:441222-441309:-1:exon
so has part: feature:439093-439176:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434953-435084:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433736:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:428382-430998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443744-443853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441222-441309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439093-439176:-1:exon

position:439176:-1
position: 439176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434953-435084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:433570-433736:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428382-430998:-1:exon

NFYA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NFYA
product: nuclear transcription factor Y subunit alpha, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021542642.1
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(428382..430998,431755..431856,432396..432569,433570..433736,434176..434281,436895..437041,439090..439176,441222..441309,443744..443853))
location: region:428382-443853:-1
so has part: feature:443744-443853:-1:exon
so has part: feature:441222-441309:-1:exon
so has part: feature:439090-439176:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433736:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:428382-430998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443744-443853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441222-441309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439090-439176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433570-433736:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428382-430998:-1:exon

NFYA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NFYA
product: nuclear transcription factor Y subunit alpha, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021542639.1
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(428382..430998,431755..431856,432396..432569,433570..433718,434176..434281,434953..435084,436895..437041,439090..439176,441222..441309,443744..443853))
location: region:428382-443853:-1
so has part: feature:443744-443853:-1:exon
so has part: feature:441222-441309:-1:exon
so has part: feature:439090-439176:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434953-435084:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433718:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:428382-430998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443744-443853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441222-441309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439090-439176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434953-435084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:433570-433718:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428382-430998:-1:exon

NFYA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NFYA
product: nuclear transcription factor Y subunit alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021542635.1
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(428382..430998,431755..431856,432396..432569,433570..433736,434176..434281,434953..435084,436895..437041,439090..439176,441222..441309,443744..443853))
location: region:428382-443853:-1
so has part: feature:443744-443853:-1:exon
so has part: feature:441222-441309:-1:exon
so has part: feature:439090-439176:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434953-435084:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433736:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:428382-430998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443744-443853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441222-441309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439090-439176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434953-435084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:433570-433736:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428382-430998:-1:exon

NFYA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NFYA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit alpha isoform X9
translation: MEQYTANSSSSTEQIVVQAGQIQQQVQGQPLMVQVSGGQLITSTGQPIMVQAVPGGQGQTIMQVPVSGTQGLQQTQQQIAVQGQQVAQAAEGQTIVYQPVNADGTILQQVTVPVTGMITIPAASLAGAQIVQTGANTNTTSSGQGTVTVTLPVAGNVVNSGGMVMMVPGAGSVPAIQRIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKEKDSPHMQDPTQSNEEAMTQMIRVS
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(430945..430998,431755..431856,432396..432569,433570..433736,434176..434281,436895..437041,441222..441296))
location: region:430945-441296:-1
so has part: feature:441222-441296:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433736:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:430945-430998:-1:exon

XP_021398318.1
type: Protein
SIO_000068: ncbiprotein

position:430945:-1
position: 430945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441296:-1
position: 441296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441222-441296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433570-433736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:430945-430998:-1:exon

NFYA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NFYA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit alpha isoform X7
translation: MEQYTANSSSSTEQIVVQAGQIQQQVQGQPLMVQVSGGQLITSTGQPIMVQAVPGGQGQTIMQVPVSGTQGLQQIQLVQPGQIQIQGGQAVQVQGQQGQTQQIIIQQPQTAVTAGQTQTQQQIAVQGQQVAQAAEGQTIVYQPVNADGTILQQGMITIPAASLAGAQIVQTGANTNTTSSGQGTVTVTLPVAGNVVNSGGMVMMVPGAGSVPAIQRIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKEKDSPHMQDPTQSNEEAMTQMIRVS
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(430945..430998,431755..431856,432396..432569,433570..433718,434176..434281,434953..435084,436895..437041,441222..441296))
location: region:430945-441296:-1
so has part: feature:441222-441296:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434953-435084:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433718:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:430945-430998:-1:exon

XP_021398316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441222-441296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434953-435084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433570-433718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:430945-430998:-1:exon

NFYA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NFYA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit alpha isoform X6
translation: MEQYTANSSSSTEQIVVQAGQIQQQVQGQPLMVQVSGGQLITSTGQPIMVQAVPGGQGQTIMQVPVSGTQGLQQIQLVQPGQIQIQGGQAVQVQGQQGQTQQIIIQQPQTAVTAGQTQTQQQIAVQGQQVAQAAEGQTIVYQPVNADGTILQQVTVPVTGMITIPAASLAGAQIVQTGANTNTTSSGQGTVTVTLPVAGNVVNSGGMVMMVPGAGSVPAIQRIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKEKDSPHMQDPTQSNEEAMTQMIRVS
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(430945..430998,431755..431856,432396..432569,433570..433736,434176..434281,434953..435084,436895..437041,441222..441296))
location: region:430945-441296:-1
so has part: feature:441222-441296:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434953-435084:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433736:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:430945-430998:-1:exon

XP_021398315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441222-441296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434953-435084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433570-433736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:430945-430998:-1:exon

NFYA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NFYA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit alpha isoform X4
translation: MEQYTANSSSSTEQIVVQAGQIQQQQGGVTAVQLQTEAQVASASGQQVQTLQVQGQPLMVQVSGGQLITSTGQPIMVQAVPGGQGQTIMQVPVSGTQGLQQIQLVQPGQIQIQGGQAVQVQGQQGQTQQIIIQQPQTAVTAGQTQTQQQIAVQGQQVAQAAEGQTIVYQPVNADGTILQQVTVPVTGMITIPAASLAGAQIVQTGANTNTTSSGQGTVTVTLPVAGNVVNSGGMVMMVPGAGSVPAIQRIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKEKDSPHMQDPTQSNEEAMTQMIRVS
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(430945..430998,431755..431856,432396..432569,433570..433736,434176..434281,434953..435084,436895..437041,439093..439173,441222..441296))
location: region:430945-441296:-1
so has part: feature:441222-441296:-1:exon
so has part: feature:439093-439173:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434953-435084:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433736:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:430945-430998:-1:exon

XP_021398313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441222-441296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439093-439173:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434953-435084:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433570-433736:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:430945-430998:-1:exon

NFYA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NFYA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit alpha isoform X2
translation: MEQYTANSSSSTEQIVVQAGQIQQQQGGVTAVQLQTEAQVASASGQQVQTLQVVQGQPLMVQVSGGQLITSTGQPIMVQAVPGGQGQTIMQVPVSGTQGLQQIQLVQPGQIQIQGGQAVQVQGQQGQTQQIIIQQPQTAVTAGQTQTQQQIAVQGQQVAQAAEGQTIVYQPVNADGTILQQVTVPVTGMITIPAASLAGAQIVQTGANTNTTSSGQGTVTVTLPVAGNVVNSGGMVMMVPGAGSVPAIQRIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKEKDSPHMQDPTQSNEEAMTQMIRVS
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(430945..430998,431755..431856,432396..432569,433570..433736,434176..434281,434953..435084,436895..437041,439090..439173,441222..441296))
location: region:430945-441296:-1
so has part: feature:441222-441296:-1:exon
so has part: feature:439090-439173:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434953-435084:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433736:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:430945-430998:-1:exon

XP_021398311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441222-441296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439090-439173:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434953-435084:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433570-433736:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:430945-430998:-1:exon

NFYA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NFYA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit alpha isoform X3
translation: MEQYTANSSSSTEQIVVQAGQIQQQQQGGVTAVQLQTEAQVASASGQQVQTLQVQGQPLMVQVSGGQLITSTGQPIMVQAVPGGQGQTIMQVPVSGTQGLQQIQLVQPGQIQIQGGQAVQVQGQQGQTQQIIIQQPQTAVTAGQTQTQQQIAVQGQQVAQAAEGQTIVYQPVNADGTILQQVTVPVTGMITIPAASLAGAQIVQTGANTNTTSSGQGTVTVTLPVAGNVVNSGGMVMMVPGAGSVPAIQRIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKEKDSPHMQDPTQSNEEAMTQMIRVS
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(430945..430998,431755..431856,432396..432569,433570..433736,434176..434281,434953..435084,436895..437041,439093..439176,441222..441296))
location: region:430945-441296:-1
so has part: feature:441222-441296:-1:exon
so has part: feature:439093-439176:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434953-435084:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433736:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:430945-430998:-1:exon

XP_021398312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441222-441296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439093-439176:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434953-435084:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433570-433736:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:430945-430998:-1:exon

NFYA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NFYA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit alpha isoform X8
translation: MEQYTANSSSSTEQIVVQAGQIQQQQQGGVTAVQLQTEAQVASASGQQVQTLQVVQGQPLMVQVSGGQLITSTGQPIMVQAVPGGQGQTIMQVPVSGTQGLQQTQQQIAVQGQQVAQAAEGQTIVYQPVNADGTILQQVTVPVTGMITIPAASLAGAQIVQTGANTNTTSSGQGTVTVTLPVAGNVVNSGGMVMMVPGAGSVPAIQRIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKEKDSPHMQDPTQSNEEAMTQMIRVS
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(430945..430998,431755..431856,432396..432569,433570..433736,434176..434281,436895..437041,439090..439176,441222..441296))
location: region:430945-441296:-1
so has part: feature:441222-441296:-1:exon
so has part: feature:439090-439176:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433736:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:430945-430998:-1:exon

XP_021398317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441222-441296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439090-439176:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433570-433736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:430945-430998:-1:exon

NFYA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NFYA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit alpha isoform X5
translation: MEQYTANSSSSTEQIVVQAGQIQQQQQGGVTAVQLQTEAQVASASGQQVQTLQVVQGQPLMVQVSGGQLITSTGQPIMVQAVPGGQGQTIMQVPVSGTQGLQQIQLVQPGQIQIQGGQAVQVQGQQGQTQQIIIQQPQTAVTAGQTQTQQQIAVQGQQVAQAAEGQTIVYQPVNADGTILQQGMITIPAASLAGAQIVQTGANTNTTSSGQGTVTVTLPVAGNVVNSGGMVMMVPGAGSVPAIQRIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKEKDSPHMQDPTQSNEEAMTQMIRVS
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(430945..430998,431755..431856,432396..432569,433570..433718,434176..434281,434953..435084,436895..437041,439090..439176,441222..441296))
location: region:430945-441296:-1
so has part: feature:441222-441296:-1:exon
so has part: feature:439090-439176:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434953-435084:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433718:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:430945-430998:-1:exon

XP_021398314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441222-441296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439090-439176:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434953-435084:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433570-433718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:430945-430998:-1:exon

NFYA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NFYA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit alpha isoform X1
translation: MEQYTANSSSSTEQIVVQAGQIQQQQQGGVTAVQLQTEAQVASASGQQVQTLQVVQGQPLMVQVSGGQLITSTGQPIMVQAVPGGQGQTIMQVPVSGTQGLQQIQLVQPGQIQIQGGQAVQVQGQQGQTQQIIIQQPQTAVTAGQTQTQQQIAVQGQQVAQAAEGQTIVYQPVNADGTILQQVTVPVTGMITIPAASLAGAQIVQTGANTNTTSSGQGTVTVTLPVAGNVVNSGGMVMMVPGAGSVPAIQRIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKEKDSPHMQDPTQSNEEAMTQMIRVS
SIO_010081: NFYA
subclass of: SO_0000673
so part of: NFYA
location: complement(join(430945..430998,431755..431856,432396..432569,433570..433736,434176..434281,434953..435084,436895..437041,439090..439176,441222..441296))
location: region:430945-441296:-1
so has part: feature:441222-441296:-1:exon
so has part: feature:439090-439176:-1:exon
so has part: feature:436895-437041:-1:exon
so has part: feature:434953-435084:-1:exon
so has part: feature:434176-434281:-1:exon
so has part: feature:433570-433736:-1:exon
so has part: feature:432396-432569:-1:exon
so has part: feature:431755-431856:-1:exon
so has part: feature:430945-430998:-1:exon

XP_021398310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441222-441296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439090-439176:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436895-437041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434953-435084:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434176-434281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433570-433736:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432396-432569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431755-431856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:430945-430998:-1:exon

OARD1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: OARD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 444260..448403
location: region:444260-448403:1
so has part: feature:444260-448403:1:exon
subclass of: SO_0000010

110477169
type: Gene
SIO_000068: ncbigene

position:444260:1
position: 444260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448403:1
position: 448403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444260-448403:1:exon

OARD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: OARD1
product: O-acyl-ADP-ribose deacylase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021542646.2
SIO_010081: OARD1
subclass of: SO_0000673
so part of: OARD1
location: join(444260..444363,444656..444723,445405..445549,445658..445716,446420..446532,446822..448403)
location: region:444260-448403:1
so has part: feature:444260-444363:1:exon
so has part: feature:444656-444723:1:exon
so has part: feature:445405-445549:1:exon
so has part: feature:445658-445716:1:exon
so has part: feature:446420-446532:1:exon
so has part: feature:446822-448403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:444260-444363:1:exon

position:444363:1
position: 444363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:444656-444723:1:exon

position:444656:1
position: 444656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444723:1
position: 444723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:445405-445549:1:exon

position:445405:1
position: 445405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445549:1
position: 445549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:445658-445716:1:exon

position:445658:1
position: 445658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445716:1
position: 445716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:446420-446532:1:exon

position:446420:1
position: 446420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446532:1
position: 446532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:446822-448403:1:exon

position:446822:1
position: 446822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OARD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: OARD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribose glycohydrolase OARD1
translation: MWAALGRLGVAQAVGPARLIAVRPAAAGVFSIPHVTMATHFSKDQEERIRCVKGDLFSCPGTDALAHCISEDCRMGAGIAVLFKKKFGGVQELLDQKKKTGEVAVLQRDERYIYYLITKQKVSHKPTYESMQKSLEAMKAHCLNNGVTDISMPRIGCGLDGLQWEKVSAILEEVFENTDIKITVYSL
SIO_010081: OARD1
subclass of: SO_0000673
so part of: OARD1
location: join(444288..444363,444656..444723,445405..445549,445658..445716,446420..446532,446822..446924)
location: region:444288-446924:1
so has part: feature:444288-444363:1:exon
so has part: feature:444656-444723:1:exon
so has part: feature:445405-445549:1:exon
so has part: feature:445658-445716:1:exon
so has part: feature:446420-446532:1:exon
so has part: feature:446822-446924:1:exon

XP_021398321.1
type: Protein
SIO_000068: ncbiprotein

position:444288:1
position: 444288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446924:1
position: 446924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444288-444363:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:444656-444723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445405-445549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:445658-445716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:446420-446532:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:446822-446924:1:exon

APOBEC2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: APOBEC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(448432..465533)
location: region:448432-465533:-1
so has part: feature:448432-465533:-1:exon
subclass of: SO_0000010

110477168
type: Gene
SIO_000068: ncbigene

position:448432:-1
position: 448432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465533:-1
position: 465533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448432-465533:-1:exon

APOBEC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: APOBEC2
product: apolipoprotein B mRNA editing enzyme catalytic subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021542645.2
SIO_010081: APOBEC2
subclass of: SO_0000673
so part of: APOBEC2
location: complement(join(448432..448967,449356..449903,453101..453258,462911..463049,463987..464196,465414..465533))
location: region:448432-465533:-1
so has part: feature:465414-465533:-1:exon
so has part: feature:463987-464196:-1:exon
so has part: feature:462911-463049:-1:exon
so has part: feature:453101-453258:-1:exon
so has part: feature:449356-449903:-1:exon
so has part: feature:448432-448967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465414-465533:-1:exon

position:465414:-1
position: 465414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:463987-464196:-1:exon

position:463987:-1
position: 463987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464196:-1
position: 464196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:462911-463049:-1:exon

position:462911:-1
position: 462911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463049:-1
position: 463049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:453101-453258:-1:exon

position:453101:-1
position: 453101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453258:-1
position: 453258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:449356-449903:-1:exon

position:449356:-1
position: 449356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449903:-1
position: 449903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:448432-448967:-1:exon

position:448967:-1
position: 448967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOBEC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: APOBEC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C->U-editing enzyme APOBEC-2
translation: MWAYTVGFTVLPHVGGFLGWFLNRKEIPAWYEKLKKPSWCPSRRAFPVAWTMLYTGMGYASYLVWSDLGGCSSKAIVPLGLYGAQLLLNWAWPPLFFGARNLNMWPQLGPSALGKMAEKQEEPSNAQNGEPDNAEEGEGKKKKVKREDLPPFEIVTGERLPAIFFKFQFRNVEYSSGRNKTFLCYVVETQGKEPATSRGYLEDEHAAAHAEMAFFNTILPTCQAGARHDVTWYVSSSPCVTCAQRICEALRKNKGLRLTIMVGRLFMWEEPEMQAALRSMKEAGCKLRIMKPQDFEYVWKNFVEQEEGEEAKSFVPWEDIQENFQYYEEKLAEILH
SIO_010081: APOBEC2
subclass of: SO_0000673
so part of: APOBEC2
location: complement(join(449363..449903,453101..453258,462911..463049,463987..464159))
location: region:449363-464159:-1
so has part: feature:463987-464159:-1:exon
so has part: feature:462911-463049:-1:exon
so has part: feature:453101-453258:-1:exon
so has part: feature:449363-449903:-1:exon

XP_021398320.2
type: Protein
SIO_000068: ncbiprotein

position:449363:-1
position: 449363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464159:-1
position: 464159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463987-464159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462911-463049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453101-453258:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:449363-449903:-1:exon

BAK1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: BAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(483539..491546)
location: region:483539-491546:-1
so has part: feature:483539-491546:-1:exon
subclass of: SO_0000010

110477161
type: Gene
SIO_000068: ncbigene

position:483539:-1
position: 483539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491546:-1
position: 491546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483539-491546:-1:exon

BAK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: BAK1
product: BCL2 antagonist/killer 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021542627.2
SIO_010081: BAK1
subclass of: SO_0000673
so part of: BAK1
location: complement(join(483539..483686,486898..487041,487111..487246,491408..491546))
location: region:483539-491546:-1
so has part: feature:491408-491546:-1:exon
so has part: feature:487111-487246:-1:exon
so has part: feature:486898-487041:-1:exon
so has part: feature:483539-483686:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:491408-491546:-1:exon

position:491408:-1
position: 491408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:487111-487246:-1:exon

position:487111:-1
position: 487111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487246:-1
position: 487246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:486898-487041:-1:exon

position:486898:-1
position: 486898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487041:-1
position: 487041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:483539-483686:-1:exon

position:483686:-1
position: 483686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BAK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: BAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bcl-2 homologous antagonist/killer
translation: MASGNEGDPPQDQGRRGSQRRRLSAEGRVAEEAEEVFRSYAFYRYQQEREERGAELPRDPEIEQIQQDPCSTESQVGQRLAIIGDDIYKRYDAEFRTMLGSLQPTRDNAYEHFTRIASRVWGSRTDPAVSPPWQEAVKTLDNVYMKYVLVAAVVALGYLVLRRFFNP
SIO_010081: BAK1
subclass of: SO_0000673
so part of: BAK1
location: complement(join(483539..483686,486898..487041,487111..487246,491408..491483))
location: region:483539-491483:-1
so has part: feature:491408-491483:-1:exon
so has part: feature:487111-487246:-1:exon
so has part: feature:486898-487041:-1:exon
so has part: feature:483539-483686:-1:exon

XP_021398302.2
type: Protein
SIO_000068: ncbiprotein

position:491483:-1
position: 491483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491408-491483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:487111-487246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486898-487041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:483539-483686:-1:exon

ITPR3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ITPR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 511354..559384
location: region:511354-559384:1
so has part: feature:511354-559384:1:exon
subclass of: SO_0000010

110477170
type: Gene
SIO_000068: ncbigene

position:511354:1
position: 511354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559384:1
position: 559384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511354-559384:1:exon

ITPR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ITPR3
product: inositol 1,4,5-trisphosphate receptor type 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021542647.1
SIO_010081: ITPR3
subclass of: SO_0000673
so part of: ITPR3
location: join(511354..511819,517712..517782,531592..531713,534198..534284,534401..534559,534671..534769,534856..534939,535971..536117,536202..536297,537263..537313,537767..537909,538042..538141,538424..538584,539248..539389,539596..539757,539840..540012,540098..540217,540603..540785,540870..541121,541348..541492,541640..541787,542082..542278,542407..542536,542790..542847,543021..543186,543327..543491,543673..543741,544093..544218,544348..544470,544633..544833,545224..545475,545571..545696,545906..546031,546131..546251,546916..547100,547208..547356,547534..547642,547784..547874,548079..548248,548679..548853,548943..549127,549812..550012,550361..550471,550809..550904,551221..551322,551550..551636,552207..552317,552722..552914,553664..553789,554207..554379,554472..554636,555123..555315,555654..555749,556079..556203,556408..556573,557461..557621,558047..558208,558502..559384)
location: region:511354-559384:1
so has part: feature:511354-511819:1:exon
so has part: feature:517712-517782:1:exon
so has part: feature:531592-531713:1:exon
so has part: feature:534198-534284:1:exon
so has part: feature:534401-534559:1:exon
so has part: feature:534671-534769:1:exon
so has part: feature:534856-534939:1:exon
so has part: feature:535971-536117:1:exon
so has part: feature:536202-536297:1:exon
so has part: feature:537263-537313:1:exon
so has part: feature:537767-537909:1:exon
so has part: feature:538042-538141:1:exon
so has part: feature:538424-538584:1:exon
so has part: feature:539248-539389:1:exon
so has part: feature:539596-539757:1:exon
so has part: feature:539840-540012:1:exon
so has part: feature:540098-540217:1:exon
so has part: feature:540603-540785:1:exon
so has part: feature:540870-541121:1:exon
so has part: feature:541348-541492:1:exon
so has part: feature:541640-541787:1:exon
so has part: feature:542082-542278:1:exon
so has part: feature:542407-542536:1:exon
so has part: feature:542790-542847:1:exon
so has part: feature:543021-543186:1:exon
so has part: feature:543327-543491:1:exon
so has part: feature:543673-543741:1:exon
so has part: feature:544093-544218:1:exon
so has part: feature:544348-544470:1:exon
so has part: feature:544633-544833:1:exon
so has part: feature:545224-545475:1:exon
so has part: feature:545571-545696:1:exon
so has part: feature:545906-546031:1:exon
so has part: feature:546131-546251:1:exon
so has part: feature:546916-547100:1:exon
so has part: feature:547208-547356:1:exon
so has part: feature:547534-547642:1:exon
so has part: feature:547784-547874:1:exon
so has part: feature:548079-548248:1:exon
so has part: feature:548679-548853:1:exon
so has part: feature:548943-549127:1:exon
so has part: feature:549812-550012:1:exon
so has part: feature:550361-550471:1:exon
so has part: feature:550809-550904:1:exon
so has part: feature:551221-551322:1:exon
so has part: feature:551550-551636:1:exon
so has part: feature:552207-552317:1:exon
so has part: feature:552722-552914:1:exon
so has part: feature:553664-553789:1:exon
so has part: feature:554207-554379:1:exon
so has part: feature:554472-554636:1:exon
so has part: feature:555123-555315:1:exon
so has part: feature:555654-555749:1:exon
so has part: feature:556079-556203:1:exon
so has part: feature:556408-556573:1:exon
so has part: feature:557461-557621:1:exon
so has part: feature:558047-558208:1:exon
so has part: feature:558502-559384:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:511354-511819:1:exon

position:511819:1
position: 511819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:517712-517782:1:exon

position:517712:1
position: 517712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517782:1
position: 517782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:531592-531713:1:exon

position:531592:1
position: 531592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531713:1
position: 531713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:534198-534284:1:exon

position:534198:1
position: 534198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534284:1
position: 534284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:534401-534559:1:exon

position:534401:1
position: 534401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534559:1
position: 534559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:534671-534769:1:exon

position:534671:1
position: 534671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534769:1
position: 534769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:534856-534939:1:exon

position:534856:1
position: 534856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534939:1
position: 534939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:535971-536117:1:exon

position:535971:1
position: 535971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536117:1
position: 536117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:536202-536297:1:exon

position:536202:1
position: 536202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536297:1
position: 536297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:537263-537313:1:exon

position:537263:1
position: 537263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537313:1
position: 537313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:537767-537909:1:exon

position:537767:1
position: 537767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537909:1
position: 537909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:538042-538141:1:exon

position:538042:1
position: 538042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538141:1
position: 538141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:538424-538584:1:exon

position:538424:1
position: 538424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538584:1
position: 538584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:539248-539389:1:exon

position:539248:1
position: 539248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539389:1
position: 539389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:539596-539757:1:exon

position:539596:1
position: 539596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539757:1
position: 539757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:539840-540012:1:exon

position:539840:1
position: 539840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540012:1
position: 540012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:540098-540217:1:exon

position:540098:1
position: 540098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540217:1
position: 540217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:540603-540785:1:exon

position:540603:1
position: 540603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540785:1
position: 540785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:540870-541121:1:exon

position:540870:1
position: 540870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541121:1
position: 541121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:541348-541492:1:exon

position:541348:1
position: 541348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541492:1
position: 541492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:541640-541787:1:exon

position:541640:1
position: 541640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541787:1
position: 541787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:542082-542278:1:exon

position:542082:1
position: 542082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542278:1
position: 542278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:542407-542536:1:exon

position:542407:1
position: 542407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542536:1
position: 542536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:542790-542847:1:exon

position:542790:1
position: 542790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542847:1
position: 542847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:543021-543186:1:exon

position:543021:1
position: 543021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543186:1
position: 543186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:543327-543491:1:exon

position:543327:1
position: 543327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543491:1
position: 543491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:543673-543741:1:exon

position:543673:1
position: 543673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543741:1
position: 543741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:544093-544218:1:exon

position:544093:1
position: 544093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544218:1
position: 544218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:544348-544470:1:exon

position:544348:1
position: 544348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544470:1
position: 544470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:544633-544833:1:exon

position:544633:1
position: 544633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544833:1
position: 544833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:545224-545475:1:exon

position:545224:1
position: 545224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545475:1
position: 545475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:545571-545696:1:exon

position:545571:1
position: 545571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545696:1
position: 545696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:545906-546031:1:exon

position:545906:1
position: 545906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546031:1
position: 546031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:546131-546251:1:exon

position:546131:1
position: 546131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546251:1
position: 546251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:546916-547100:1:exon

position:546916:1
position: 546916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547100:1
position: 547100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:547208-547356:1:exon

position:547208:1
position: 547208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547356:1
position: 547356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:547534-547642:1:exon

position:547534:1
position: 547534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547642:1
position: 547642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:547784-547874:1:exon

position:547784:1
position: 547784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547874:1
position: 547874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:548079-548248:1:exon

position:548079:1
position: 548079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548248:1
position: 548248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:548679-548853:1:exon

position:548679:1
position: 548679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548853:1
position: 548853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:548943-549127:1:exon

position:548943:1
position: 548943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549127:1
position: 549127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:549812-550012:1:exon

position:549812:1
position: 549812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550012:1
position: 550012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:550361-550471:1:exon

position:550361:1
position: 550361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550471:1
position: 550471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:550809-550904:1:exon

position:550809:1
position: 550809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550904:1
position: 550904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:551221-551322:1:exon

position:551221:1
position: 551221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551322:1
position: 551322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:551550-551636:1:exon

position:551550:1
position: 551550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551636:1
position: 551636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:552207-552317:1:exon

position:552207:1
position: 552207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552317:1
position: 552317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:552722-552914:1:exon

position:552722:1
position: 552722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552914:1
position: 552914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:553664-553789:1:exon

position:553664:1
position: 553664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553789:1
position: 553789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:554207-554379:1:exon

position:554207:1
position: 554207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554379:1
position: 554379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:554472-554636:1:exon

position:554472:1
position: 554472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554636:1
position: 554636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:555123-555315:1:exon

position:555123:1
position: 555123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555315:1
position: 555315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:555654-555749:1:exon

position:555654:1
position: 555654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555749:1
position: 555749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:556079-556203:1:exon

position:556079:1
position: 556079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556203:1
position: 556203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:556408-556573:1:exon

position:556408:1
position: 556408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556573:1
position: 556573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:557461-557621:1:exon

position:557461:1
position: 557461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557621:1
position: 557621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:558047-558208:1:exon

position:558047:1
position: 558047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558208:1
position: 558208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:558502-559384:1:exon

position:558502:1
position: 558502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ITPR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ITPR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol 1,4,5-trisphosphate receptor type 3
translation: MNEMSSFLHIGDIVSLYAEGSVNGFISTLGLVDDRCVVEPAAGDLDNPPKKFRDCLFKVCPMNRYSAQKQYWKAKQTKQDKDKIADVVLLQKLQHAAQMEQKQNETENKKVHGDVVKYGSVIQLLHMKSNKYLTVNKRLPALLEKNAMRVTLDATGNEGSWLFIQPFWKLRSNGDNVVVGDKVILNPVNAGQPLHASNYELADNAGCKEVNSVNCNTSWKINLFMQFCDHMEEVLKGGDVVRLFHAEQEKFLTCDEYKGKLHVFLRTTLRQSATSATSSNALWEVEVVHHDPCRGGAGHWNGLYRFKHLATGNYLAAEENPSYKGDVAEPKAAPTGGSSRASRRNTGEKIKYRLVAVPHGNDIASLFELDPTTLQKTDSFVPRNSYVRLRHLCTNTWIQSTNVPIDIDEERPIRLMLGTCPTKEDKEAFAIVSVPVSEIRDLDFANDASSMLASVVEKMNEGFLSQNDRRFVIQLLEDLVFFVSDVPNNGQNVLDIVVTKPNRERQKLMREQNILKQIFGILKAPFKDKGGEGPLVRLEELSDQKNAPYQYMFRLCYRVLRHSQEDYRKNQEHIAKQFGMMQSQIGYDILAEDTITALLHNNRKLLEKHITKTEVETFVSLVRKNREPRFLDYLSDLCVSNHIAIPVTQELICKCVLDSKNSDILIKTELRPVKETSQTHEYLSIEYLEEEVWLTWTDKNNDHHEKSIRQLAQEARAGNAHDENVLSYYRYQLKLFARMCLDRQYLAIKEISQQLGVDLIFLCMADEMLPFDLRASFCHLMLHVHVDRDPQELVMPVKFARLWTEIPTAITIKDYDSNLNVSRDDKKNKFASTMEFVEDYLNNVVSEAVPFANEEKNKLTFEVVSLAHNLIYFGFYSFSELLRLTRTLLGIIDCVQNPQLMMQAVYNDEVTGKNVRRSIQGVGQMMSTMVLSRKQSIFSPPSLSTGSAPEQVDRGRSIENENIVVMETKLKILEILQFILNVRLDYRISYLLSVFKKEFVEVYPMQDSAADGTAPAFDSTTAAMNLDRIGEHAEAMFGVGKSSSMLEVDDEGGRMFLRVLIHLTMHDYPPLISGSLQLLFKHFSQRQEVLHTFKQVQLLISAQDVENYKVIKSELDKLRTMVEKSELWVDKKGSTKGDSTGEGNKKEKKEHGADEEVIAPGEKSSENYQIVKGILERLNKMCGVGEQVRKKQQRLLKNMDAHKVMLDLLQIPYEKGDAKMMEILKFTHQFLQKFCAGNQENQALLHKHLNLFLTPGLLEAETMQHIFLNNYQLCSEINETVPQHFIHCVATHGRHVQYLDFLHTIIKAEGKYVKKCQDMIMTELTNAGDDVVVFYNDKASLATLLEMMTAARDGVEENSPLMYHISLVDLLAACAEGKNVYTEIKCTSLLPLEDVVRVVTHEDCITEVKMAYVNFVNHCYVDTEVEMKEIYTSNHIWTLFENFTLDMAQMCKKREKRLPDATLEKYVLTVVLDTINAFFSSPFSENSTSLQTHQTIVVQLLQSTMRLLECPWLQQQHKSSVESCIRTLAMVAKSRSIALPMDLDAHVSSLLNSSSTSTVQRNTSSYKAATRSFPRVSTTPNQWDYKNIIEKLQDIISALEDRLKPLVEAELSVLVDVLHRPELLFMEGTEAFQRCESGGFLSKLVQHTKDLMETEEKLCIKVLRTLQQMLVKRNKYGERGNLLRKMLMNNYLQNKRSSSKGEMGDAAGGGQDQDWSAIAAVQCRLDREGATKLVADLIMNTKNEKIFQESILLAIRLLDGGNTEIQKSFYNLMTSDKKSEKFFKVLHDRMKKAQQETKSTVSVNMSDIGNKPREDKDEPEPGTKGRGDTFLLPGTPTRYPMAVGFRKGHDPGEQGQNNEMGVTVLIMEPILRFLQLLCENHNRDLQNFLRCQNNKTNYNLVCETLQFLDIMCGSTTGGLGLLGLYINEYNVALITQTLETLTEYCQGPCHENQSCIVTHESNGIDIITALILNDISPLCKYRMDLVLQLKDNASKLLLAL…
SIO_010081: ITPR3
subclass of: SO_0000673
so part of: ITPR3
location: join(511731..511819,517712..517782,531592..531713,534198..534284,534401..534559,534671..534769,534856..534939,535971..536117,536202..536297,537263..537313,537767..537909,538042..538141,538424..538584,539248..539389,539596..539757,539840..540012,540098..540217,540603..540785,540870..541121,541348..541492,541640..541787,542082..542278,542407..542536,542790..542847,543021..543186,543327..543491,543673..543741,544093..544218,544348..544470,544633..544833,545224..545475,545571..545696,545906..546031,546131..546251,546916..547100,547208..547356,547534..547642,547784..547874,548079..548248,548679..548853,548943..549127,549812..550012,550361..550471,550809..550904,551221..551322,551550..551636,552207..552317,552722..552914,553664..553789,554207..554379,554472..554636,555123..555315,555654..555749,556079..556203,556408..556573,557461..557621,558047..558208,558502..558570)
location: region:511731-558570:1
so has part: feature:511731-511819:1:exon
so has part: feature:517712-517782:1:exon
so has part: feature:531592-531713:1:exon
so has part: feature:534198-534284:1:exon
so has part: feature:534401-534559:1:exon
so has part: feature:534671-534769:1:exon
so has part: feature:534856-534939:1:exon
so has part: feature:535971-536117:1:exon
so has part: feature:536202-536297:1:exon
so has part: feature:537263-537313:1:exon
so has part: feature:537767-537909:1:exon
so has part: feature:538042-538141:1:exon
so has part: feature:538424-538584:1:exon
so has part: feature:539248-539389:1:exon
so has part: feature:539596-539757:1:exon
so has part: feature:539840-540012:1:exon
so has part: feature:540098-540217:1:exon
so has part: feature:540603-540785:1:exon
so has part: feature:540870-541121:1:exon
so has part: feature:541348-541492:1:exon
so has part: feature:541640-541787:1:exon
so has part: feature:542082-542278:1:exon
so has part: feature:542407-542536:1:exon
so has part: feature:542790-542847:1:exon
so has part: feature:543021-543186:1:exon
so has part: feature:543327-543491:1:exon
so has part: feature:543673-543741:1:exon
so has part: feature:544093-544218:1:exon
so has part: feature:544348-544470:1:exon
so has part: feature:544633-544833:1:exon
so has part: feature:545224-545475:1:exon
so has part: feature:545571-545696:1:exon
so has part: feature:545906-546031:1:exon
so has part: feature:546131-546251:1:exon
so has part: feature:546916-547100:1:exon
so has part: feature:547208-547356:1:exon
so has part: feature:547534-547642:1:exon
so has part: feature:547784-547874:1:exon
so has part: feature:548079-548248:1:exon
so has part: feature:548679-548853:1:exon
so has part: feature:548943-549127:1:exon
so has part: feature:549812-550012:1:exon
so has part: feature:550361-550471:1:exon
so has part: feature:550809-550904:1:exon
so has part: feature:551221-551322:1:exon
so has part: feature:551550-551636:1:exon
so has part: feature:552207-552317:1:exon
so has part: feature:552722-552914:1:exon
so has part: feature:553664-553789:1:exon
so has part: feature:554207-554379:1:exon
so has part: feature:554472-554636:1:exon
so has part: feature:555123-555315:1:exon
so has part: feature:555654-555749:1:exon
so has part: feature:556079-556203:1:exon
so has part: feature:556408-556573:1:exon
so has part: feature:557461-557621:1:exon
so has part: feature:558047-558208:1:exon
so has part: feature:558502-558570:1:exon

XP_021398322.1
type: Protein
SIO_000068: ncbiprotein

position:511731:1
position: 511731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558570:1
position: 558570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511731-511819:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517712-517782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531592-531713:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534198-534284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534401-534559:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:534671-534769:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534856-534939:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:535971-536117:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536202-536297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:537263-537313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:537767-537909:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:538042-538141:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:538424-538584:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:539248-539389:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:539596-539757:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:539840-540012:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:540098-540217:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:540603-540785:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:540870-541121:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:541348-541492:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:541640-541787:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542082-542278:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:542407-542536:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:542790-542847:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:543021-543186:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:543327-543491:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:543673-543741:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:544093-544218:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:544348-544470:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:544633-544833:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:545224-545475:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:545571-545696:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:545906-546031:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:546131-546251:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:546916-547100:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:547208-547356:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:547534-547642:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:547784-547874:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:548079-548248:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:548679-548853:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:548943-549127:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:549812-550012:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:550361-550471:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:550809-550904:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:551221-551322:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:551550-551636:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:552207-552317:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:552722-552914:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:553664-553789:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:554207-554379:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:554472-554636:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:555123-555315:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:555654-555749:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:556079-556203:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:556408-556573:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:557461-557621:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:558047-558208:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:558502-558570:1:exon

LOC110477150
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110477150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(560312..564380)
location: region:560312-564380:-1
so has part: feature:560312-564380:-1:exon
subclass of: SO_0000010

110477150
type: Gene
SIO_000068: ncbigene

position:560312:-1
position: 560312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564380:-1
position: 564380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560312-564380:-1:exon

LOC110477150
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110477150
product: ubiquinol-cytochrome-c reductase complex assembly factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_021542617.2
SIO_010081: LOC110477150
subclass of: SO_0000673
so part of: LOC110477150
location: complement(join(560312..560489,561192..561261,561567..561641,564218..564380))
location: region:560312-564380:-1
so has part: feature:564218-564380:-1:exon
so has part: feature:561567-561641:-1:exon
so has part: feature:561192-561261:-1:exon
so has part: feature:560312-560489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:564218-564380:-1:exon

position:564218:-1
position: 564218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:561567-561641:-1:exon

position:561567:-1
position: 561567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561641:-1
position: 561641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:561192-561261:-1:exon

position:561192:-1
position: 561192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561261:-1
position: 561261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:560312-560489:-1:exon

position:560489:-1
position: 560489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110477150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110477150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquinol-cytochrome-c reductase complex assembly factor 2
translation: MAASRYRRFLRLCEEWPVEETKQQRDLGSFLRQRVAQAFREGENTPISDPEACDQMYESLVRIHTNFYKNKYPRLKDTTFTGVTVENCRTILATDILKQMEDRKKGTWKRLREKFSAKNPEEDLK
SIO_010081: LOC110477150
subclass of: SO_0000673
so part of: LOC110477150
location: complement(join(560395..560489,561192..561261,561567..561641,564218..564355))
location: region:560395-564355:-1
so has part: feature:564218-564355:-1:exon
so has part: feature:561567-561641:-1:exon
so has part: feature:561192-561261:-1:exon
so has part: feature:560395-560489:-1:exon

XP_021398292.1
type: Protein
SIO_000068: ncbiprotein

position:560395:-1
position: 560395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564355:-1
position: 564355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564218-564355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:561567-561641:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:561192-561261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560395-560489:-1:exon

IP6K3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: IP6K3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(566845..581179)
location: region:566845-581179:-1
so has part: feature:566845-581179:-1:exon
subclass of: SO_0000010

110477151
type: Gene
SIO_000068: ncbigene

position:566845:-1
position: 566845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581179:-1
position: 581179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566845-581179:-1:exon

IP6K3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IP6K3
product: inositol hexakisphosphate kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021542618.2
SIO_010081: IP6K3
subclass of: SO_0000673
so part of: IP6K3
location: complement(join(566845..567921,569320..569495,570118..570290,571555..571735,576321..576653,581065..581179))
location: region:566845-581179:-1
so has part: feature:581065-581179:-1:exon
so has part: feature:576321-576653:-1:exon
so has part: feature:571555-571735:-1:exon
so has part: feature:570118-570290:-1:exon
so has part: feature:569320-569495:-1:exon
so has part: feature:566845-567921:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581065-581179:-1:exon

position:581065:-1
position: 581065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:576321-576653:-1:exon

position:576321:-1
position: 576321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576653:-1
position: 576653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:571555-571735:-1:exon

position:571555:-1
position: 571555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571735:-1
position: 571735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:570118-570290:-1:exon

position:570118:-1
position: 570118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570290:-1
position: 570290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:569320-569495:-1:exon

position:569320:-1
position: 569320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569495:-1
position: 569495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:566845-567921:-1:exon

position:567921:-1
position: 567921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IP6K3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IP6K3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol hexakisphosphate kinase 3
translation: MPKCSLTAASGAAARGSEEPGPGSAPSFRSPRRSPAPPDSLSARPARRKTQRGGNTRVGEKRPGPARARLRVPAPCAAGAPRAVPGTMVGQTAEPRAAVLLQPFVHQVGGHSSMLTYDEHTVCKPLVSQELSFYESLPLAMRQFTPQYKGIVSVHLKKDSLGNLTLIASPGLGQPDGCGRLDSAGGDPAVTLWHRCKWSHTQVTKTFKDSCPGKMLLRTDLQYHTDSLLEDANGKQAERKSYNPWGLHCHRQHLNRMSSKHNENKLHQFLLLENVVSKYSYPCILDLKMGTRQHGDDASEEKKARHIKKCEQSTSASLGVRICGMQVYQADTGHFLCKDKYYGRKLSAEGFRQTLRQFLCNGNQLRTDLLEPIILRLKALLAVIRKQSSYRFYSSSLLIIYDGQEHKESADQHLSFPKTQGTNPSRVDVRMIDFAHTTFKGSKSNPNPTPHDGPDHGYIFGLENLIKILQNLLEGK
SIO_010081: IP6K3
subclass of: SO_0000673
so part of: IP6K3
location: complement(join(567469..567921,569320..569495,570118..570290,571555..571735,576321..576653,581065..581179))
location: region:567469-581179:-1
so has part: feature:581065-581179:-1:exon
so has part: feature:576321-576653:-1:exon
so has part: feature:571555-571735:-1:exon
so has part: feature:570118-570290:-1:exon
so has part: feature:569320-569495:-1:exon
so has part: feature:567469-567921:-1:exon

XP_021398293.2
type: Protein
SIO_000068: ncbiprotein

position:567469:-1
position: 567469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581065-581179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:576321-576653:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571555-571735:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570118-570290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:569320-569495:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567469-567921:-1:exon

LEMD2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LEMD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(583674..595534)
location: region:583674-595534:-1
so has part: feature:583674-595534:-1:exon
subclass of: SO_0000010

110477171
type: Gene
SIO_000068: ncbigene

position:583674:-1
position: 583674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595534:-1
position: 595534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583674-595534:-1:exon

LEMD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LEMD2
product: LEM domain nuclear envelope protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021542648.2
SIO_010081: LEMD2
subclass of: SO_0000673
so part of: LEMD2
location: complement(join(583674..585567,586613..586715,586798..586899,587821..587966,589677..589756,590401..590477,591690..591765,592991..593031,594169..595534))
location: region:583674-595534:-1
so has part: feature:594169-595534:-1:exon
so has part: feature:592991-593031:-1:exon
so has part: feature:591690-591765:-1:exon
so has part: feature:590401-590477:-1:exon
so has part: feature:589677-589756:-1:exon
so has part: feature:587821-587966:-1:exon
so has part: feature:586798-586899:-1:exon
so has part: feature:586613-586715:-1:exon
so has part: feature:583674-585567:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:594169-595534:-1:exon

position:594169:-1
position: 594169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:592991-593031:-1:exon

position:592991:-1
position: 592991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593031:-1
position: 593031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:591690-591765:-1:exon

position:591690:-1
position: 591690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591765:-1
position: 591765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:590401-590477:-1:exon

position:590401:-1
position: 590401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590477:-1
position: 590477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:589677-589756:-1:exon

position:589677:-1
position: 589677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589756:-1
position: 589756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:587821-587966:-1:exon

position:587821:-1
position: 587821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587966:-1
position: 587966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:586798-586899:-1:exon

position:586798:-1
position: 586798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586899:-1
position: 586899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:586613-586715:-1:exon

position:586613:-1
position: 586613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586715:-1
position: 586715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:583674-585567:-1:exon

position:585567:-1
position: 585567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LEMD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LEMD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LEM domain-containing protein 2
translation: MAELTDAELRKELLALGYRPGPITATTRKVYIKKLGCLRAEVAADRRSGRTAPPSPGRSSARPPQASPSRQRSGFTGGAARESEEEEEEEEEEEEEEVGRPPASRWGASGESGGQAWGDPRGSPPGRAGASRVEGGSSRDSLGRLSPSEQWGTTVERGGGGLGTSLAGHGGLSSPSQWYTSIERSGGLGADRAGASRWETSRDVAEGLGATLDGFRGSSLQSGASERSGGLSSGLRPTLDRFRGSNSTSQWSPSAERSGGLGSRAGLGLDEVGGLSSTPYWGSSAASKPLPSEEKSRSHWWTSAGGIGAQSSRAAWDTAGERRGLSSDSWWSRESEVTPSTQWGSSAAPGRFSSLFRRGKEDSASSVERDAGGRAGGLIRRFPWRAGSDGGHGVTPRAALLRSAPRQQPERKGKGLEYYLSQFLCLASLVLLLIFLGILMVKMAGSGWLDGREESFNLLPVDCEKRTDDFCQAKHKDATMAVLHELYSYLSVQAGNFECGNPENLKSKCIWVSEVKDHVLNVTGGTSQKFEAALHWILNSNKDLGIWLKGRDLSEPVSSVEEVFCLESAHPQMGLGCRFRRAVVTAITNLFLFFWGLITLWGILLYLRYRWRKMEEEEQAMYEMVKKIIAVVQDHYKEWERNLERYPYVGIYHVRDSLIPPQSRKKMKRVWERAVDFLASNESRIQTESHRVAGEDMLVWRWTKPSYLSDSEH
SIO_010081: LEMD2
subclass of: SO_0000673
so part of: LEMD2
location: complement(join(585417..585567,586613..586715,586798..586899,587821..587966,589677..589756,590401..590477,591690..591765,592991..593031,594169..595534))
location: region:585417-595534:-1
so has part: feature:594169-595534:-1:exon
so has part: feature:592991-593031:-1:exon
so has part: feature:591690-591765:-1:exon
so has part: feature:590401-590477:-1:exon
so has part: feature:589677-589756:-1:exon
so has part: feature:587821-587966:-1:exon
so has part: feature:586798-586899:-1:exon
so has part: feature:586613-586715:-1:exon
so has part: feature:585417-585567:-1:exon

XP_021398323.2
type: Protein
SIO_000068: ncbiprotein

position:585417:-1
position: 585417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594169-595534:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592991-593031:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591690-591765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590401-590477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589677-589756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:587821-587966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:586798-586899:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586613-586715:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:585417-585567:-1:exon

MLN
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(600299..605218)
location: region:600299-605218:-1
so has part: feature:600299-605218:-1:exon
subclass of: SO_0000010

110477162
type: Gene
SIO_000068: ncbigene

position:600299:-1
position: 600299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605218:-1
position: 605218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600299-605218:-1:exon

MLN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MLN
product: motilin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506971.1
SIO_010081: MLN
subclass of: SO_0000673
so part of: MLN
location: complement(join(600299..600438,601198..601300,602441..602557,604638..604763,605178..605218))
location: region:600299-605218:-1
so has part: feature:605178-605218:-1:exon
so has part: feature:604638-604763:-1:exon
so has part: feature:602441-602557:-1:exon
so has part: feature:601198-601300:-1:exon
so has part: feature:600299-600438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:605178-605218:-1:exon

position:605178:-1
position: 605178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:604638-604763:-1:exon

position:604638:-1
position: 604638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604763:-1
position: 604763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:602441-602557:-1:exon

position:602441:-1
position: 602441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602557:-1
position: 602557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:601198-601300:-1:exon

position:601198:-1
position: 601198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601300:-1
position: 601300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:600299-600438:-1:exon

position:600438:-1
position: 600438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MLN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: promotilin
translation: MALGMVSRKVVASLLLVSLLSVLAEQTQGFMPFFTQSDFQKMQEKERNKAGQKKSLSSLQQLEEEDFSEQSGVDVNAAKTLQQALPVRAWLTPRQLEKYQDVLEKLLAELLQDTPDAD
SIO_010081: MLN
subclass of: SO_0000673
so part of: MLN
location: complement(join(600431..600438,601198..601300,602441..602557,604638..604763,605178..605180))
location: region:600431-605180:-1
so has part: feature:605178-605180:-1:exon
so has part: feature:604638-604763:-1:exon
so has part: feature:602441-602557:-1:exon
so has part: feature:601198-601300:-1:exon
so has part: feature:600431-600438:-1:exon

XP_031362831.1
type: Protein
SIO_000068: ncbiprotein

position:600431:-1
position: 600431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605180:-1
position: 605180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605178-605180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604638-604763:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602441-602557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:601198-601300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600431-600438:-1:exon

LOC110477152
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110477152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 616707..618855
location: region:616707-618855:1
so has part: feature:616707-618855:1:exon
subclass of: SO_0000010

110477152
type: Gene
SIO_000068: ncbigene

position:616707:1
position: 616707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618855:1
position: 618855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616707-618855:1:exon

LOC110477152
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110477152
product: green-sensitive opsin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins
transcript id: XM_021542619.2
SIO_010081: LOC110477152
subclass of: SO_0000673
so part of: LOC110477152
location: join(616707..617067,618683..618855)
location: region:616707-618855:1
so has part: feature:616707-617067:1:exon
so has part: feature:618683-618855:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616707-617067:1:exon

position:617067:1
position: 617067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:618683-618855:1:exon

position:618683:1
position: 618683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110477152
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110477152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: green-sensitive opsin
translation: MNGTEGINFYVPMSNKTGVVRSPFEYPQYYLAEPWKYRLVCCYIFFLISTGFPINFLTLLVTFKHKKLRQPLNYILVNLAVADLCMACFGFTVTFYTAWNGYFVFGPIGCAVEGFFATLGGQVALWSLVVLAIERYIVICKPMGNFRFSASHALMGIAFTWVMAISCAAPPLFGWSR
SIO_010081: LOC110477152
subclass of: SO_0000673
so part of: LOC110477152
location: join(616707..617067,618683..618855)
location: region:616707-618855:1
so has part: feature:616707-617067:1:exon
so has part: feature:618683-618855:1:exon

XP_021398294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:616707-617067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618683-618855:1:exon

LOC110473425
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110473425
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 629286..632610
location: region:629286-632610:1
so has part: feature:629286-632610:1:exon
subclass of: SO_0000010

110473425
type: Gene
SIO_000068: ncbigene

position:629286:1
position: 629286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632610:1
position: 632610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629286-632610:1:exon

LOC110473425
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110473425
product: green-sensitive opsin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 mRNAs, 117 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021535959.2
SIO_010081: LOC110473425
subclass of: SO_0000673
so part of: LOC110473425
location: join(629286..629692,631305..631473,631745..631910,632016..632255,632413..632610)
location: region:629286-632610:1
so has part: feature:629286-629692:1:exon
so has part: feature:631305-631473:1:exon
so has part: feature:631745-631910:1:exon
so has part: feature:632016-632255:1:exon
so has part: feature:632413-632610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629286-629692:1:exon

position:629692:1
position: 629692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:631305-631473:1:exon

position:631305:1
position: 631305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631473:1
position: 631473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:631745-631910:1:exon

position:631745:1
position: 631745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631910:1
position: 631910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:632016-632255:1:exon

position:632016:1
position: 632016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632255:1
position: 632255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:632413-632610:1:exon

position:632413:1
position: 632413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110473425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110473425
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: green-sensitive opsin
translation: MNGTEGINFYVPMSNKTGVVRSPFEYPQYYLAEPWKYRLVCCYIFFLISTGFPINFLTLLVTFKHKKLRQPLNYILVNLAVADLCMACFGFTVTFYTAWNGYFVFGPIGCAVEGFFATLGGQVALWSLVVLAIERYIVICKPMGNFRFSASHALMGIAFTWVMAISCAAPPLFGWSRYIPEGMQCSCGPDYYTHNPDFHNESYVLYMFVIHFIIPVVIIFFSYGRLVCKVREAAAQQQESATTQKAEKEVTRMVILMVLGFMLAWTPYAVVAFWIFTNKGADFTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTICCGKNPFGDEETSSTVSQSKTEVSSVSSSQVSPA
SIO_010081: LOC110473425
subclass of: SO_0000673
so part of: LOC110473425
location: join(629332..629692,631305..631473,631745..631910,632016..632255,632413..632544)
location: region:629332-632544:1
so has part: feature:629332-629692:1:exon
so has part: feature:631305-631473:1:exon
so has part: feature:631745-631910:1:exon
so has part: feature:632016-632255:1:exon
so has part: feature:632413-632544:1:exon

XP_021391634.1
type: Protein
SIO_000068: ncbiprotein

position:629332:1
position: 629332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632544:1
position: 632544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629332-629692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631305-631473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:631745-631910:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632016-632255:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:632413-632544:1:exon

GRM4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: GRM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(706197..743004)
location: region:706197-743004:-1
so has part: feature:706197-743004:-1:exon
subclass of: SO_0000010

110473444
type: Gene
SIO_000068: ncbigene

position:706197:-1
position: 706197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743004:-1
position: 743004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706197-743004:-1:exon

GRM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GRM4
product: glutamate metabotropic receptor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021535982.1
SIO_010081: GRM4
subclass of: SO_0000673
so part of: GRM4
location: complement(join(706197..706998,709412..709658,714311..715246,715654..715790,716439..716639,719842..719982,720435..720589,722487..722622,730087..730303,736151..736929,742925..743004))
location: region:706197-743004:-1
so has part: feature:742925-743004:-1:exon
so has part: feature:736151-736929:-1:exon
so has part: feature:730087-730303:-1:exon
so has part: feature:722487-722622:-1:exon
so has part: feature:720435-720589:-1:exon
so has part: feature:719842-719982:-1:exon
so has part: feature:716439-716639:-1:exon
so has part: feature:715654-715790:-1:exon
so has part: feature:714311-715246:-1:exon
so has part: feature:709412-709658:-1:exon
so has part: feature:706197-706998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:742925-743004:-1:exon

position:742925:-1
position: 742925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:736151-736929:-1:exon

position:736151:-1
position: 736151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736929:-1
position: 736929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:730087-730303:-1:exon

position:730087:-1
position: 730087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730303:-1
position: 730303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:722487-722622:-1:exon

position:722487:-1
position: 722487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722622:-1
position: 722622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:720435-720589:-1:exon

position:720435:-1
position: 720435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720589:-1
position: 720589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:719842-719982:-1:exon

position:719842:-1
position: 719842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719982:-1
position: 719982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:716439-716639:-1:exon

position:716439:-1
position: 716439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716639:-1
position: 716639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:715654-715790:-1:exon

position:715654:-1
position: 715654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715790:-1
position: 715790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:714311-715246:-1:exon

position:714311:-1
position: 714311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715246:-1
position: 715246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:709412-709658:-1:exon

position:709412:-1
position: 709412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709658:-1
position: 709658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:706197-706998:-1:exon

position:706998:-1
position: 706998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GRM4
product: glutamate metabotropic receptor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021535983.2
SIO_010081: GRM4
subclass of: SO_0000673
so part of: GRM4
location: complement(join(706197..706998,709412..709658,714311..715246,715654..715790,716439..716639,719842..719982,720435..720589,722487..722622,730087..730303,736151..736929,741981..742091))
location: region:706197-742091:-1
so has part: feature:741981-742091:-1:exon
so has part: feature:736151-736929:-1:exon
so has part: feature:730087-730303:-1:exon
so has part: feature:722487-722622:-1:exon
so has part: feature:720435-720589:-1:exon
so has part: feature:719842-719982:-1:exon
so has part: feature:716439-716639:-1:exon
so has part: feature:715654-715790:-1:exon
so has part: feature:714311-715246:-1:exon
so has part: feature:709412-709658:-1:exon
so has part: feature:706197-706998:-1:exon

position:742091:-1
position: 742091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741981-742091:-1:exon

position:741981:-1
position: 741981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:736151-736929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730087-730303:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722487-722622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720435-720589:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:719842-719982:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:716439-716639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:715654-715790:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:714311-715246:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:709412-709658:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:706197-706998:-1:exon

GRM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: GRM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 4
translation: MSGAHFCMERLSFCLFLSAWSWGWAPGGAAKPKGQGYPHMNSIRIDGDITLGGLFPVHGRGAEGKACGELKKEKGIHRLEAMLFALDRINNDPDLLPNITLGARILDTCSRDTHALEQSLTFVQALIEKDSTEVRCVSGGPPIITKPERVVGVIGASGSSVSIMVANILRLFKIPQISYASTAPDLSDNSRYDFFSRVVPSDTYQAQAMVDIVKALKWNYVSTLASEGSYGESGVEAFIQKSREDGGVCVAQSVKIPREPKPGEFDKIIRRLLETSHARAVIIFANEDDIRRVLEAAKRANQTGHFIWMGSDSWGSKIAPVLHLEEVAEGSVTILPKRVSVRGFDRYFSSRTLDNNRRNIWFAEFWEENFHCKLSRHALRKGSSIKKCTNRERIGQDSSYEQEGKVQFVIDAVYAMGHALHNMHKNLCPGKVGLCPSMDPVDGVELLKYIRSVNFSGIAGTPVTFNENGDAPGRYDIYQYQIRNSTPEYKVIGQWTDHLHLKVENMLWPGGGSQQPSSICSLPCKPGERKKLVKGIPCCWHCERCDGYQYQLDEFHCKRCHFNERPNENHTSCTPIPIIKLEWSSPWAVVPVFIAIVGIIATLFVVITFVRYNDTPIVKASGRELSYVLLTGIFLCYATTFLMIAEPDLSTCSLRRIFLGLGMSISYAALLTKTNRIYRIFEQGKKSVSAPRFISPASQLVITFSLISLQLVGVCIWFIVDPSHSVIDYEDQRTTNPHFARGILKCDISDLSLICLLGYSMLLMVTCTVYAIKTRGVPETFNEAKPIGFTMYTTCIVWLAFIPIFFGTSQSAEKMYIQTTTLTISVSLSASVSLGMLYMPKVYIILFHPEQNVPKRKRSLKAVVTAATMSNKFSQKGGFRPNGEAKSELCENLETQALATKQTYVSYSNHAI
SIO_010081: GRM4
subclass of: SO_0000673
so part of: GRM4
location: complement(join(706949..706998,709412..709658,714311..715246,715654..715790,716439..716639,719842..719982,720435..720589,722487..722622,730087..730303,736151..736669))
location: region:706949-736669:-1
so has part: feature:736151-736669:-1:exon
so has part: feature:730087-730303:-1:exon
so has part: feature:722487-722622:-1:exon
so has part: feature:720435-720589:-1:exon
so has part: feature:719842-719982:-1:exon
so has part: feature:716439-716639:-1:exon
so has part: feature:715654-715790:-1:exon
so has part: feature:714311-715246:-1:exon
so has part: feature:709412-709658:-1:exon
so has part: feature:706949-706998:-1:exon

XP_021391657.1
type: Protein
SIO_000068: ncbiprotein

position:706949:-1
position: 706949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736669:-1
position: 736669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736151-736669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730087-730303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:722487-722622:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:720435-720589:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:719842-719982:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:716439-716639:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:715654-715790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:714311-715246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:709412-709658:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:706949-706998:-1:exon

GRM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: GRM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 4
translation: MSGAHFCMERLSFCLFLSAWSWGWAPGGAAKPKGQGYPHMNSIRIDGDITLGGLFPVHGRGAEGKACGELKKEKGIHRLEAMLFALDRINNDPDLLPNITLGARILDTCSRDTHALEQSLTFVQALIEKDSTEVRCVSGGPPIITKPERVVGVIGASGSSVSIMVANILRLFKIPQISYASTAPDLSDNSRYDFFSRVVPSDTYQAQAMVDIVKALKWNYVSTLASEGSYGESGVEAFIQKSREDGGVCVAQSVKIPREPKPGEFDKIIRRLLETSHARAVIIFANEDDIRRVLEAAKRANQTGHFIWMGSDSWGSKIAPVLHLEEVAEGSVTILPKRVSVRGFDRYFSSRTLDNNRRNIWFAEFWEENFHCKLSRHALRKGSSIKKCTNRERIGQDSSYEQEGKVQFVIDAVYAMGHALHNMHKNLCPGKVGLCPSMDPVDGVELLKYIRSVNFSGIAGTPVTFNENGDAPGRYDIYQYQIRNSTPEYKVIGQWTDHLHLKVENMLWPGGGSQQPSSICSLPCKPGERKKLVKGIPCCWHCERCDGYQYQLDEFHCKRCHFNERPNENHTSCTPIPIIKLEWSSPWAVVPVFIAIVGIIATLFVVITFVRYNDTPIVKASGRELSYVLLTGIFLCYATTFLMIAEPDLSTCSLRRIFLGLGMSISYAALLTKTNRIYRIFEQGKKSVSAPRFISPASQLVITFSLISLQLVGVCIWFIVDPSHSVIDYEDQRTTNPHFARGILKCDISDLSLICLLGYSMLLMVTCTVYAIKTRGVPETFNEAKPIGFTMYTTCIVWLAFIPIFFGTSQSAEKMYIQTTTLTISVSLSASVSLGMLYMPKVYIILFHPEQNVPKRKRSLKAVVTAATMSNKFSQKGGFRPNGEAKSELCENLETQALATKQTYVSYSNHAI
SIO_010081: GRM4
subclass of: SO_0000673
so part of: GRM4
location: complement(join(706949..706998,709412..709658,714311..715246,715654..715790,716439..716639,719842..719982,720435..720589,722487..722622,730087..730303,736151..736669))
location: region:706949-736669:-1
so has part: feature:736151-736669:-1:exon
so has part: feature:730087-730303:-1:exon
so has part: feature:722487-722622:-1:exon
so has part: feature:720435-720589:-1:exon
so has part: feature:719842-719982:-1:exon
so has part: feature:716439-716639:-1:exon
so has part: feature:715654-715790:-1:exon
so has part: feature:714311-715246:-1:exon
so has part: feature:709412-709658:-1:exon
so has part: feature:706949-706998:-1:exon

XP_021391658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:736151-736669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730087-730303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:722487-722622:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:720435-720589:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:719842-719982:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:716439-716639:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:715654-715790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:714311-715246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:709412-709658:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:706949-706998:-1:exon

HMGA1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HMGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 757432..765354
location: region:757432-765354:1
so has part: feature:757432-765354:1:exon
subclass of: SO_0000010

110473426
type: Gene
SIO_000068: ncbigene

position:757432:1
position: 757432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765354:1
position: 765354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757432-765354:1:exon

HMGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HMGA1
product: high mobility group AT-hook 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_021535965.2
SIO_010081: HMGA1
subclass of: SO_0000673
so part of: HMGA1
location: join(757432..757551,757794..757920,761814..761918,762585..762668,763055..763105,765118..765354)
location: region:757432-765354:1
so has part: feature:757432-757551:1:exon
so has part: feature:757794-757920:1:exon
so has part: feature:761814-761918:1:exon
so has part: feature:762585-762668:1:exon
so has part: feature:763055-763105:1:exon
so has part: feature:765118-765354:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:757432-757551:1:exon

position:757551:1
position: 757551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:757794-757920:1:exon

position:757794:1
position: 757794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757920:1
position: 757920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:761814-761918:1:exon

position:761814:1
position: 761814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761918:1
position: 761918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:762585-762668:1:exon

position:762585:1
position: 762585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762668:1
position: 762668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:763055-763105:1:exon

position:763055:1
position: 763055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763105:1
position: 763105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:765118-765354:1:exon

position:765118:1
position: 765118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HMGA1
product: high mobility group AT-hook 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021535964.2
SIO_010081: HMGA1
subclass of: SO_0000673
so part of: HMGA1
location: join(757432..757551,757794..757920,761814..761918,762588..762668,763055..763105,764197..764654)
location: region:757432-764654:1
so has part: feature:757432-757551:1:exon
so has part: feature:757794-757920:1:exon
so has part: feature:761814-761918:1:exon
so has part: feature:762588-762668:1:exon
so has part: feature:763055-763105:1:exon
so has part: feature:764197-764654:1:exon

position:764654:1
position: 764654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757432-757551:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:757794-757920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761814-761918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:762588-762668:1:exon

position:762588:1
position: 762588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:763055-763105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:764197-764654:1:exon

position:764197:1
position: 764197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HMGA1
product: high mobility group AT-hook 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021535961.2
SIO_010081: HMGA1
subclass of: SO_0000673
so part of: HMGA1
location: join(757432..757551,757794..757920,761814..761918,762585..762668,763055..763105,764197..764398)
location: region:757432-764398:1
so has part: feature:757432-757551:1:exon
so has part: feature:757794-757920:1:exon
so has part: feature:761814-761918:1:exon
so has part: feature:762585-762668:1:exon
so has part: feature:763055-763105:1:exon
so has part: feature:764197-764398:1:exon

position:764398:1
position: 764398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757432-757551:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:757794-757920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761814-761918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:762585-762668:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763055-763105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:764197-764398:1:exon

HMGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HMGA1
product: high mobility group AT-hook 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031506968.1
SIO_010081: HMGA1
subclass of: SO_0000673
so part of: HMGA1
location: join(757641..757920,761814..761918,762585..762668,763055..763105,764197..764398)
location: region:757641-764398:1
so has part: feature:757641-757920:1:exon
so has part: feature:761814-761918:1:exon
so has part: feature:762585-762668:1:exon
so has part: feature:763055-763105:1:exon
so has part: feature:764197-764398:1:exon

position:757641:1
position: 757641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757641-757920:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761814-761918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:762585-762668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:763055-763105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:764197-764398:1:exon

HMGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HMGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group protein HMG-I/HMG-Y isoform X3
translation: MSESSAKSSQPLASKGEKDVSEKRGRGRPRKKPQQEPSEAPTPKRPRGRPKGSKNKATTKGRKAAVTPGRKPRGRPKKSV
SIO_010081: HMGA1
subclass of: SO_0000673
so part of: HMGA1
location: join(761817..761918,762585..762668,763055..763105,765118..765123)
location: region:761817-765123:1
so has part: feature:761817-761918:1:exon
so has part: feature:762585-762668:1:exon
so has part: feature:763055-763105:1:exon
so has part: feature:765118-765123:1:exon

XP_021391640.1
type: Protein
SIO_000068: ncbiprotein

position:761817:1
position: 761817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765123:1
position: 765123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761817-761918:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:762585-762668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763055-763105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765118-765123:1:exon

HMGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HMGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group protein HMG-I/HMG-Y isoform X1
translation: MSESSAKSSQPLASKGEKDVSEKRGRGRPRKKPQQEPSEAPTPKRPRGRPKGSKNKATTKGRKAAVTPGRKPRGRPKKSQQDEEEVNISQESSEEEQ
SIO_010081: HMGA1
subclass of: SO_0000673
so part of: HMGA1
location: join(761817..761918,762585..762668,763055..763105,764197..764253)
location: region:761817-764253:1
so has part: feature:761817-761918:1:exon
so has part: feature:762585-762668:1:exon
so has part: feature:763055-763105:1:exon
so has part: feature:764197-764253:1:exon

XP_021391636.1
type: Protein
SIO_000068: ncbiprotein

position:764253:1
position: 764253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761817-761918:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:762585-762668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763055-763105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:764197-764253:1:exon

HMGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HMGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group protein HMG-I/HMG-Y isoform X1
translation: MSESSAKSSQPLASKGEKDVSEKRGRGRPRKKPQQEPSEAPTPKRPRGRPKGSKNKATTKGRKAAVTPGRKPRGRPKKSQQDEEEVNISQESSEEEQ
SIO_010081: HMGA1
subclass of: SO_0000673
so part of: HMGA1
location: join(761817..761918,762585..762668,763055..763105,764197..764253)
location: region:761817-764253:1
so has part: feature:761817-761918:1:exon
so has part: feature:762585-762668:1:exon
so has part: feature:763055-763105:1:exon
so has part: feature:764197-764253:1:exon

XP_031362828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:761817-761918:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:762585-762668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763055-763105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:764197-764253:1:exon

HMGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HMGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group protein HMG-I/HMG-Y isoform X2
translation: MSESSAKSSQPLASKGEKDVSEKRGRGRPRKKPQEPSEAPTPKRPRGRPKGSKNKATTKGRKAAVTPGRKPRGRPKKSQQDEEEVNISQESSEEEQ
SIO_010081: HMGA1
subclass of: SO_0000673
so part of: HMGA1
location: join(761817..761918,762588..762668,763055..763105,764197..764253)
location: region:761817-764253:1
so has part: feature:761817-761918:1:exon
so has part: feature:762588-762668:1:exon
so has part: feature:763055-763105:1:exon
so has part: feature:764197-764253:1:exon

XP_021391639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:761817-761918:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:762588-762668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763055-763105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:764197-764253:1:exon

SMIM29
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SMIM29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(765723..766672)
location: region:765723-766672:-1
so has part: feature:765723-766672:-1:exon
subclass of: SO_0000010

110473427
type: Gene
SIO_000068: ncbigene

position:765723:-1
position: 765723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766672:-1
position: 766672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765723-766672:-1:exon

SMIM29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SMIM29
product: small integral membrane protein 29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021535967.2
SIO_010081: SMIM29
subclass of: SO_0000673
so part of: SMIM29
location: complement(join(765723..765953,766209..766314,766384..766409,766500..766672))
location: region:765723-766672:-1
so has part: feature:766500-766672:-1:exon
so has part: feature:766384-766409:-1:exon
so has part: feature:766209-766314:-1:exon
so has part: feature:765723-765953:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:766500-766672:-1:exon

position:766500:-1
position: 766500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:766384-766409:-1:exon

position:766384:-1
position: 766384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766409:-1
position: 766409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:766209-766314:-1:exon

position:766209:-1
position: 766209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766314:-1
position: 766314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:765723-765953:-1:exon

position:765953:-1
position: 765953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMIM29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SMIM29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 29
translation: MSNATAPTAPGAAGDSLVGSVLGPFLLLTLLGALLAAVMYVKKKRRSERLRHRLLPMYSYDPAEEPPESEQELLVEAEEAQVVPGWGGSSSPWPPRRDWRA
SIO_010081: SMIM29
subclass of: SO_0000673
so part of: SMIM29
location: complement(join(765891..765953,766209..766314,766384..766409,766500..766610))
location: region:765891-766610:-1
so has part: feature:766500-766610:-1:exon
so has part: feature:766384-766409:-1:exon
so has part: feature:766209-766314:-1:exon
so has part: feature:765891-765953:-1:exon

XP_021391642.1
type: Protein
SIO_000068: ncbiprotein

position:765891:-1
position: 765891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766610:-1
position: 766610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766500-766610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:766384-766409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:766209-766314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765891-765953:-1:exon

LOC110473447
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110473447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(774519..795701)
location: region:774519-795701:-1
so has part: feature:774519-795701:-1:exon
subclass of: SO_0000010

110473447
type: Gene
SIO_000068: ncbigene

position:774519:-1
position: 774519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795701:-1
position: 795701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774519-795701:-1:exon

LOC110473447
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110473447
product: diphosphoinositol polyphosphate phosphohydrolase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031506978.1
SIO_010081: LOC110473447
subclass of: SO_0000673
so part of: LOC110473447
location: complement(join(774519..774913,775656..775740,776374..776418,784471..784581,784678..784852))
location: region:774519-784852:-1
so has part: feature:784678-784852:-1:exon
so has part: feature:784471-784581:-1:exon
so has part: feature:776374-776418:-1:exon
so has part: feature:775656-775740:-1:exon
so has part: feature:774519-774913:-1:exon

position:784852:-1
position: 784852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784678-784852:-1:exon

position:784678:-1
position: 784678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:784471-784581:-1:exon

position:784471:-1
position: 784471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784581:-1
position: 784581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:776374-776418:-1:exon

position:776374:-1
position: 776374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776418:-1
position: 776418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:775656-775740:-1:exon

position:775656:-1
position: 775656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775740:-1
position: 775740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:774519-774913:-1:exon

position:774913:-1
position: 774913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110473447
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110473447
product: diphosphoinositol polyphosphate phosphohydrolase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_031506979.1
SIO_010081: LOC110473447
subclass of: SO_0000673
so part of: LOC110473447
location: complement(join(774519..774913,775656..775740,776374..776418,784471..784581,784716..784836))
location: region:774519-784836:-1
so has part: feature:784716-784836:-1:exon
so has part: feature:784471-784581:-1:exon
so has part: feature:776374-776418:-1:exon
so has part: feature:775656-775740:-1:exon
so has part: feature:774519-774913:-1:exon

position:784836:-1
position: 784836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784716-784836:-1:exon

position:784716:-1
position: 784716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:784471-784581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:776374-776418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775656-775740:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:774519-774913:-1:exon

LOC110473447
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110473447
product: diphosphoinositol polyphosphate phosphohydrolase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_021535988.2
SIO_010081: LOC110473447
subclass of: SO_0000673
so part of: LOC110473447
location: complement(join(774521..774913,775656..775740,776374..776418,784471..784581,795522..795701))
location: region:774521-795701:-1
so has part: feature:795522-795701:-1:exon
so has part: feature:784471-784581:-1:exon
so has part: feature:776374-776418:-1:exon
so has part: feature:775656-775740:-1:exon
so has part: feature:774521-774913:-1:exon

position:774521:-1
position: 774521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795522-795701:-1:exon

position:795522:-1
position: 795522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:784471-784581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:776374-776418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775656-775740:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:774521-774913:-1:exon

LOC110473447
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110473447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: diphosphoinositol polyphosphate phosphohydrolase 1 isoform X3
translation: MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPGVAAVREVCEEAGVKGTLGRLVGIFENRDRKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHKPVQASYFETLRQGCLANNGTPVMTTPYSESSVSDIR
SIO_010081: LOC110473447
subclass of: SO_0000673
so part of: LOC110473447
location: complement(join(774744..774913,775656..775740,776374..776418,784471..784581,795522..795620))
location: region:774744-795620:-1
so has part: feature:795522-795620:-1:exon
so has part: feature:784471-784581:-1:exon
so has part: feature:776374-776418:-1:exon
so has part: feature:775656-775740:-1:exon
so has part: feature:774744-774913:-1:exon

XP_021391663.1
type: Protein
SIO_000068: ncbiprotein

position:774744:-1
position: 774744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795620:-1
position: 795620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795522-795620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784471-784581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:776374-776418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775656-775740:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:774744-774913:-1:exon

LOC110473447
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110473447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: diphosphoinositol polyphosphate phosphohydrolase 1 isoform X1
translation: MEFVHGEKRAHICEGEASSGKTLPWVLLVSSSRHPDRWIVPGGGMEPEEEPGVAAVREVCEEAGVKGTLGRLVGIFENRDRKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHKPVQASYFETLRQGCLANNGTPVMTTPYSESSVSDIR
SIO_010081: LOC110473447
subclass of: SO_0000673
so part of: LOC110473447
location: complement(join(774744..774913,775656..775740,776374..776418,784471..784581,784678..784752))
location: region:774744-784752:-1
so has part: feature:784678-784752:-1:exon
so has part: feature:784471-784581:-1:exon
so has part: feature:776374-776418:-1:exon
so has part: feature:775656-775740:-1:exon
so has part: feature:774744-774913:-1:exon

XP_031362838.1
type: Protein
SIO_000068: ncbiprotein

position:784752:-1
position: 784752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784678-784752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784471-784581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:776374-776418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775656-775740:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:774744-774913:-1:exon

LOC110473447
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110473447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: diphosphoinositol polyphosphate phosphohydrolase 1 isoform X2
translation: MGRSELTFVLLVSSSRHPDRWIVPGGGMEPEEEPGVAAVREVCEEAGVKGTLGRLVGIFENRDRKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHKPVQASYFETLRQGCLANNGTPVMTTPYSESSVSDIR
SIO_010081: LOC110473447
subclass of: SO_0000673
so part of: LOC110473447
location: complement(join(774744..774913,775656..775740,776374..776418,784471..784581,784716..784739))
location: region:774744-784739:-1
so has part: feature:784716-784739:-1:exon
so has part: feature:784471-784581:-1:exon
so has part: feature:776374-776418:-1:exon
so has part: feature:775656-775740:-1:exon
so has part: feature:774744-774913:-1:exon

XP_031362839.1
type: Protein
SIO_000068: ncbiprotein

position:784739:-1
position: 784739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784716-784739:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784471-784581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:776374-776418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775656-775740:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:774744-774913:-1:exon

RPS10
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: RPS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(797016..802981)
location: region:797016-802981:-1
so has part: feature:797016-802981:-1:exon
subclass of: SO_0000010

110473446
type: Gene
SIO_000068: ncbigene

position:797016:-1
position: 797016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802981:-1
position: 802981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797016-802981:-1:exon

RPS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RPS10
product: ribosomal protein S10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021535987.2
SIO_010081: RPS10
subclass of: SO_0000673
so part of: RPS10
location: complement(join(797016..797104,797476..797531,797849..797926,800641..800812,801407..801556,802961..802981))
location: region:797016-802981:-1
so has part: feature:802961-802981:-1:exon
so has part: feature:801407-801556:-1:exon
so has part: feature:800641-800812:-1:exon
so has part: feature:797849-797926:-1:exon
so has part: feature:797476-797531:-1:exon
so has part: feature:797016-797104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:802961-802981:-1:exon

position:802961:-1
position: 802961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:801407-801556:-1:exon

position:801407:-1
position: 801407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801556:-1
position: 801556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:800641-800812:-1:exon

position:800641:-1
position: 800641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800812:-1
position: 800812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:797849-797926:-1:exon

position:797849:-1
position: 797849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797926:-1
position: 797926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:797476-797531:-1:exon

position:797476:-1
position: 797476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797531:-1
position: 797531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:797016-797104:-1:exon

position:797104:-1
position: 797104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RPS10
product: ribosomal protein S10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_021535986.1
SIO_010081: RPS10
subclass of: SO_0000673
so part of: RPS10
location: complement(join(797016..797104,797476..797531,797849..797926,800641..800812,801407..801556,802075..802138))
location: region:797016-802138:-1
so has part: feature:802075-802138:-1:exon
so has part: feature:801407-801556:-1:exon
so has part: feature:800641-800812:-1:exon
so has part: feature:797849-797926:-1:exon
so has part: feature:797476-797531:-1:exon
so has part: feature:797016-797104:-1:exon

position:802138:-1
position: 802138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802075-802138:-1:exon

position:802075:-1
position: 802075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:801407-801556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:800641-800812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:797849-797926:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:797476-797531:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797016-797104:-1:exon

RPS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RPS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S10
translation: MLMPKKNRIAIYELLFKEGVMVAKKDVHMAKHPELVDKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPGADKKAEAGAGAATEFQFRGGFGRGRGQPPQ
SIO_010081: RPS10
subclass of: SO_0000673
so part of: RPS10
location: complement(join(797063..797104,797476..797531,797849..797926,800641..800812,801407..801556))
location: region:797063-801556:-1
so has part: feature:801407-801556:-1:exon
so has part: feature:800641-800812:-1:exon
so has part: feature:797849-797926:-1:exon
so has part: feature:797476-797531:-1:exon
so has part: feature:797063-797104:-1:exon

XP_021391661.1
type: Protein
SIO_000068: ncbiprotein

position:797063:-1
position: 797063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:801407-801556:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:800641-800812:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:797849-797926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:797476-797531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:797063-797104:-1:exon

RPS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RPS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S10
translation: MLMPKKNRIAIYELLFKEGVMVAKKDVHMAKHPELVDKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPGADKKAEAGAGAATEFQFRGGFGRGRGQPPQ
SIO_010081: RPS10
subclass of: SO_0000673
so part of: RPS10
location: complement(join(797063..797104,797476..797531,797849..797926,800641..800812,801407..801556))
location: region:797063-801556:-1
so has part: feature:801407-801556:-1:exon
so has part: feature:800641-800812:-1:exon
so has part: feature:797849-797926:-1:exon
so has part: feature:797476-797531:-1:exon
so has part: feature:797063-797104:-1:exon

XP_021391662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:801407-801556:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:800641-800812:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:797849-797926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:797476-797531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:797063-797104:-1:exon

PACSIN1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PACSIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 803024..817035
location: region:803024-817035:1
so has part: feature:803024-817035:1:exon
subclass of: SO_0000010

110473445
type: Gene
SIO_000068: ncbigene

position:803024:1
position: 803024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817035:1
position: 817035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803024-817035:1:exon

PACSIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PACSIN1
product: protein kinase C and casein kinase substrate in neurons 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021535984.2
SIO_010081: PACSIN1
subclass of: SO_0000673
so part of: PACSIN1
location: join(803024..803233,812508..812640,812973..813129,813239..813474,813616..813771,814098..814273,814464..814584,814661..814785,814903..815096,815429..817035)
location: region:803024-817035:1
so has part: feature:803024-803233:1:exon
so has part: feature:812508-812640:1:exon
so has part: feature:812973-813129:1:exon
so has part: feature:813239-813474:1:exon
so has part: feature:813616-813771:1:exon
so has part: feature:814098-814273:1:exon
so has part: feature:814464-814584:1:exon
so has part: feature:814661-814785:1:exon
so has part: feature:814903-815096:1:exon
so has part: feature:815429-817035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:803024-803233:1:exon

position:803233:1
position: 803233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:812508-812640:1:exon

position:812508:1
position: 812508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812640:1
position: 812640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:812973-813129:1:exon

position:812973:1
position: 812973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813129:1
position: 813129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:813239-813474:1:exon

position:813239:1
position: 813239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813474:1
position: 813474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:813616-813771:1:exon

position:813616:1
position: 813616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813771:1
position: 813771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:814098-814273:1:exon

position:814098:1
position: 814098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814273:1
position: 814273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:814464-814584:1:exon

position:814464:1
position: 814464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814584:1
position: 814584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:814661-814785:1:exon

position:814661:1
position: 814661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814785:1
position: 814785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:814903-815096:1:exon

position:814903:1
position: 814903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815096:1
position: 815096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:815429-817035:1:exon

position:815429:1
position: 815429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PACSIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PACSIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kinase C and casein kinase substrate in neurons protein 1
translation: MSGSYDESASAAEETTDSFWEVGNYKRTVKRIDDGHRLCNDLMNCVHERAKIEKSYAQQLTDWSKRWRQLIEKGPQYGSLEKAWAAIMTEADKVSELHQEVKNSLLNDDFEKVKNWQKDAYHKQIMGGFKEAKEAEDGFRKAQKPWAKKLKELETAKKAYHLACKEEKLAMTREANSKADQSNTPEQQKKLQDKVEKCKQDVQKTQEKYEKVLDELNKCTPQYIESMEQVFEQCQQFEEKRLNFLKEMLLDIKRHLNLAESSSYANVYRELEQTIRMSDAQEDLRWFRSTSGPGMPMNWPQFEEWNPDLTHTITRKEKQKKGEGVALTNAGSAGDAGAQAGERGSVSSHDRGQTYSAEWSDDEGSNSFNTSEANGGANPFDEESAGKGVRVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCKGRLDNGQLGLYPANYVEAI
SIO_010081: PACSIN1
subclass of: SO_0000673
so part of: PACSIN1
location: join(812578..812640,812973..813129,813239..813474,813616..813771,814098..814273,814464..814584,814661..814785,814903..815096,815429..815538)
location: region:812578-815538:1
so has part: feature:812578-812640:1:exon
so has part: feature:812973-813129:1:exon
so has part: feature:813239-813474:1:exon
so has part: feature:813616-813771:1:exon
so has part: feature:814098-814273:1:exon
so has part: feature:814464-814584:1:exon
so has part: feature:814661-814785:1:exon
so has part: feature:814903-815096:1:exon
so has part: feature:815429-815538:1:exon

XP_021391659.1
type: Protein
SIO_000068: ncbiprotein

position:812578:1
position: 812578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815538:1
position: 815538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812578-812640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:812973-813129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:813239-813474:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:813616-813771:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:814098-814273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:814464-814584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:814661-814785:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:814903-815096:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:815429-815538:1:exon

SPDEF
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SPDEF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(817630..825554)
location: region:817630-825554:-1
so has part: feature:817630-825554:-1:exon
subclass of: SO_0000010

110473448
type: Gene
SIO_000068: ncbigene

position:817630:-1
position: 817630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825554:-1
position: 825554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817630-825554:-1:exon

SPDEF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SPDEF
product: SAM pointed domain containing ETS transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506980.1
SIO_010081: SPDEF
subclass of: SO_0000673
so part of: SPDEF
location: complement(join(817630..818865,818962..819102,819517..819564,819656..819853,820492..820965,825497..825554))
location: region:817630-825554:-1
so has part: feature:825497-825554:-1:exon
so has part: feature:820492-820965:-1:exon
so has part: feature:819656-819853:-1:exon
so has part: feature:819517-819564:-1:exon
so has part: feature:818962-819102:-1:exon
so has part: feature:817630-818865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825497-825554:-1:exon

position:825497:-1
position: 825497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:820492-820965:-1:exon

position:820492:-1
position: 820492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820965:-1
position: 820965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:819656-819853:-1:exon

position:819656:-1
position: 819656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819853:-1
position: 819853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:819517-819564:-1:exon

position:819517:-1
position: 819517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819564:-1
position: 819564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:818962-819102:-1:exon

position:818962:-1
position: 818962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819102:-1
position: 819102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:817630-818865:-1:exon

position:818865:-1
position: 818865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPDEF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SPDEF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SAM pointed domain-containing Ets transcription factor
translation: MGSASPGLTALPPGRLAWPDPALLPPPRDPDPRSWGCPESPSPPSTPEQPLPAFCLHYFDMLYPEDTAWATKGAGELAPSSGQGGREEARKEPEQCPIIDSQGLGLRPEGELQDSLHLEEHSLEQVQSMVVGEVLKDIETACKLLNIAADPMDWSPGNVQKWILWTEHQYRLPQIGKSFQELSGKDLCAMSEEQFCQRSPACGDILHAHLDIWKSAAWMKEKAAPGDVRYCGGDTGWADSEVDSSCAGQPIHLWQFLKELLLKPHNYGRFIRWLNKDKGIFKIEDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYKKGIIRKPDISQRLVYQFVHPV
SIO_010081: SPDEF
subclass of: SO_0000673
so part of: SPDEF
location: complement(join(818687..818865,818962..819102,819517..819564,819656..819853,820492..820939))
location: region:818687-820939:-1
so has part: feature:820492-820939:-1:exon
so has part: feature:819656-819853:-1:exon
so has part: feature:819517-819564:-1:exon
so has part: feature:818962-819102:-1:exon
so has part: feature:818687-818865:-1:exon

XP_031362840.1
type: Protein
SIO_000068: ncbiprotein

position:818687:-1
position: 818687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820939:-1
position: 820939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820492-820939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:819656-819853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:819517-819564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:818962-819102:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818687-818865:-1:exon

ILRUN
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ILRUN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(835806..863687)
location: region:835806-863687:-1
so has part: feature:835806-863687:-1:exon
subclass of: SO_0000010

110473449
type: Gene
SIO_000068: ncbigene

position:835806:-1
position: 835806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863687:-1
position: 863687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835806-863687:-1:exon

ILRUN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ILRUN
product: inflammation and lipid regulator with UBA-like and NBR1-like domains
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021535990.1
SIO_010081: ILRUN
subclass of: SO_0000673
so part of: ILRUN
location: complement(join(835806..839192,846609..846937,848480..848677,851898..852052,863511..863687))
location: region:835806-863687:-1
so has part: feature:863511-863687:-1:exon
so has part: feature:851898-852052:-1:exon
so has part: feature:848480-848677:-1:exon
so has part: feature:846609-846937:-1:exon
so has part: feature:835806-839192:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:863511-863687:-1:exon

position:863511:-1
position: 863511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:851898-852052:-1:exon

position:851898:-1
position: 851898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852052:-1
position: 852052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:848480-848677:-1:exon

position:848480:-1
position: 848480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848677:-1
position: 848677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:846609-846937:-1:exon

position:846609:-1
position: 846609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846937:-1
position: 846937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:835806-839192:-1:exon

position:839192:-1
position: 839192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ILRUN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ILRUN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ILRUN
translation: MEGMDVDLDAELMQKFSCLGTTDKDVLIGEFQRLLGFQLSPAGCAFFLDMTNWNLQAAIGAYYDFESPNINVPSMSFVEDVTIGEGESIPPDTQFTKTWRIQNTGTEAWPPGVCLKYVGGDQFGHVNMVMVRSLEPQEMADVSVQMCSPSTAGMYQGQWRMCTATGLYYGDVIWVILSVEVGGLLGVTQQLSSFETEFNTQPHRKVEGNFNPFASPQKNRQPDENNLKDPGGSELGTISKNTWGPAPDQIEQDQNGLSQNSVNLSPSSHSNNLSVVTYSKGFHGPYHFGQS
SIO_010081: ILRUN
subclass of: SO_0000673
so part of: ILRUN
location: complement(join(839157..839192,846609..846937,848480..848677,851898..852052,863511..863668))
location: region:839157-863668:-1
so has part: feature:863511-863668:-1:exon
so has part: feature:851898-852052:-1:exon
so has part: feature:848480-848677:-1:exon
so has part: feature:846609-846937:-1:exon
so has part: feature:839157-839192:-1:exon

XP_021391665.1
type: Protein
SIO_000068: ncbiprotein

position:839157:-1
position: 839157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863668:-1
position: 863668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863511-863668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:851898-852052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:848480-848677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846609-846937:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:839157-839192:-1:exon

SNRPC
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SNRPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 865160..869658
location: region:865160-869658:1
so has part: feature:865160-869658:1:exon
subclass of: SO_0000010

110473428
type: Gene
SIO_000068: ncbigene

position:865160:1
position: 865160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869658:1
position: 869658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:865160-869658:1:exon

SNRPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SNRPC
product: small nuclear ribonucleoprotein polypeptide C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_021535968.2
SIO_010081: SNRPC
subclass of: SO_0000673
so part of: SNRPC
location: join(865160..865239,865462..865504,865848..865956,867263..867355,867931..868035,869290..869658)
location: region:865160-869658:1
so has part: feature:865160-865239:1:exon
so has part: feature:865462-865504:1:exon
so has part: feature:865848-865956:1:exon
so has part: feature:867263-867355:1:exon
so has part: feature:867931-868035:1:exon
so has part: feature:869290-869658:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:865160-865239:1:exon

position:865239:1
position: 865239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:865462-865504:1:exon

position:865462:1
position: 865462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865504:1
position: 865504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:865848-865956:1:exon

position:865848:1
position: 865848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865956:1
position: 865956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:867263-867355:1:exon

position:867263:1
position: 867263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867355:1
position: 867355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:867931-868035:1:exon

position:867931:1
position: 867931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868035:1
position: 868035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:869290-869658:1:exon

position:869290:1
position: 869290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNRPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SNRPC
product: small nuclear ribonucleoprotein polypeptide C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_021535969.2
SIO_010081: SNRPC
subclass of: SO_0000673
so part of: SNRPC
location: join(865160..865239,865462..865504,865848..865956,867266..867355,867931..868035,869290..869658)
location: region:865160-869658:1
so has part: feature:865160-865239:1:exon
so has part: feature:865462-865504:1:exon
so has part: feature:865848-865956:1:exon
so has part: feature:867266-867355:1:exon
so has part: feature:867931-868035:1:exon
so has part: feature:869290-869658:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:865160-865239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:865462-865504:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:865848-865956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:867266-867355:1:exon

position:867266:1
position: 867266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:867931-868035:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:869290-869658:1:exon

SNRPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SNRPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U1 small nuclear ribonucleoprotein C isoform X1
translation: MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTIAAAFQQGKIPPTPFSAPPPAGAMIPPPPSIPGPPRPGMMPAPHMGGPPMMPMMGPPPPGMMPVGPAPGMRPPMGGHMPMMPGPPMMRPPSRPMMVPTRPGMTRPDR
SIO_010081: SNRPC
subclass of: SO_0000673
so part of: SNRPC
location: join(865232..865239,865462..865504,865848..865956,867263..867355,867931..868035,869290..869414)
location: region:865232-869414:1
so has part: feature:865232-865239:1:exon
so has part: feature:865462-865504:1:exon
so has part: feature:865848-865956:1:exon
so has part: feature:867263-867355:1:exon
so has part: feature:867931-868035:1:exon
so has part: feature:869290-869414:1:exon

XP_021391643.1
type: Protein
SIO_000068: ncbiprotein

position:865232:1
position: 865232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869414:1
position: 869414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:865232-865239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:865462-865504:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:865848-865956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:867263-867355:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:867931-868035:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:869290-869414:1:exon

SNRPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SNRPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U1 small nuclear ribonucleoprotein C isoform X2
translation: MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQGKIPPTPFSAPPPAGAMIPPPPSIPGPPRPGMMPAPHMGGPPMMPMMGPPPPGMMPVGPAPGMRPPMGGHMPMMPGPPMMRPPSRPMMVPTRPGMTRPDR
SIO_010081: SNRPC
subclass of: SO_0000673
so part of: SNRPC
location: join(865232..865239,865462..865504,865848..865956,867266..867355,867931..868035,869290..869414)
location: region:865232-869414:1
so has part: feature:865232-865239:1:exon
so has part: feature:865462-865504:1:exon
so has part: feature:865848-865956:1:exon
so has part: feature:867266-867355:1:exon
so has part: feature:867931-868035:1:exon
so has part: feature:869290-869414:1:exon

XP_021391644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:865232-865239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:865462-865504:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:865848-865956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:867266-867355:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:867931-868035:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:869290-869414:1:exon

UHRF1BP1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: UHRF1BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 870245..895763
location: region:870245-895763:1
so has part: feature:870245-895763:1:exon
subclass of: SO_0000010

110473450
type: Gene
SIO_000068: ncbigene

position:870245:1
position: 870245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895763:1
position: 895763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870245-895763:1:exon

UHRF1BP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: UHRF1BP1
product: UHRF1 binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021535991.1
SIO_010081: UHRF1BP1
subclass of: SO_0000673
so part of: UHRF1BP1
location: join(870245..870256,870567..870674,881701..881863,882627..882665,883136..883227,883420..883609,883776..883916,884465..884635,885173..885350,885679..885765,885899..886063,886508..886650,887366..887507,887978..888171,888408..889948,890170..890366,890840..890991,891076..891223,892339..892610,892931..893039,893422..893537,893941..895763)
location: region:870245-895763:1
so has part: feature:870245-870256:1:exon
so has part: feature:870567-870674:1:exon
so has part: feature:881701-881863:1:exon
so has part: feature:882627-882665:1:exon
so has part: feature:883136-883227:1:exon
so has part: feature:883420-883609:1:exon
so has part: feature:883776-883916:1:exon
so has part: feature:884465-884635:1:exon
so has part: feature:885173-885350:1:exon
so has part: feature:885679-885765:1:exon
so has part: feature:885899-886063:1:exon
so has part: feature:886508-886650:1:exon
so has part: feature:887366-887507:1:exon
so has part: feature:887978-888171:1:exon
so has part: feature:888408-889948:1:exon
so has part: feature:890170-890366:1:exon
so has part: feature:890840-890991:1:exon
so has part: feature:891076-891223:1:exon
so has part: feature:892339-892610:1:exon
so has part: feature:892931-893039:1:exon
so has part: feature:893422-893537:1:exon
so has part: feature:893941-895763:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:870245-870256:1:exon

position:870256:1
position: 870256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:870567-870674:1:exon

position:870567:1
position: 870567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870674:1
position: 870674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:881701-881863:1:exon

position:881701:1
position: 881701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881863:1
position: 881863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:882627-882665:1:exon

position:882627:1
position: 882627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882665:1
position: 882665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:883136-883227:1:exon

position:883136:1
position: 883136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883227:1
position: 883227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:883420-883609:1:exon

position:883420:1
position: 883420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883609:1
position: 883609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:883776-883916:1:exon

position:883776:1
position: 883776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883916:1
position: 883916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:884465-884635:1:exon

position:884465:1
position: 884465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884635:1
position: 884635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:885173-885350:1:exon

position:885173:1
position: 885173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885350:1
position: 885350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:885679-885765:1:exon

position:885679:1
position: 885679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885765:1
position: 885765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:885899-886063:1:exon

position:885899:1
position: 885899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886063:1
position: 886063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:886508-886650:1:exon

position:886508:1
position: 886508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886650:1
position: 886650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:887366-887507:1:exon

position:887366:1
position: 887366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887507:1
position: 887507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:887978-888171:1:exon

position:887978:1
position: 887978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888171:1
position: 888171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:888408-889948:1:exon

position:888408:1
position: 888408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889948:1
position: 889948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:890170-890366:1:exon

position:890170:1
position: 890170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890366:1
position: 890366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:890840-890991:1:exon

position:890840:1
position: 890840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890991:1
position: 890991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:891076-891223:1:exon

position:891076:1
position: 891076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891223:1
position: 891223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:892339-892610:1:exon

position:892339:1
position: 892339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892610:1
position: 892610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:892931-893039:1:exon

position:892931:1
position: 892931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893039:1
position: 893039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:893422-893537:1:exon

position:893422:1
position: 893422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893537:1
position: 893537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:893941-895763:1:exon

position:893941:1
position: 893941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UHRF1BP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: UHRF1BP1
product: UHRF1 binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021535992.1
SIO_010081: UHRF1BP1
subclass of: SO_0000673
so part of: UHRF1BP1
location: join(870245..870256,870567..870674,881701..881863,882627..882665,883136..883227,883420..883609,883776..883916,884465..884635,885173..885350,885679..885765,885899..886063,886508..886650,887366..887507,887978..888171,888408..889948,890170..890366,890840..890991,891076..891223,892339..892610,892931..893039,893422..893537,893947..895763)
location: region:870245-895763:1
so has part: feature:870245-870256:1:exon
so has part: feature:870567-870674:1:exon
so has part: feature:881701-881863:1:exon
so has part: feature:882627-882665:1:exon
so has part: feature:883136-883227:1:exon
so has part: feature:883420-883609:1:exon
so has part: feature:883776-883916:1:exon
so has part: feature:884465-884635:1:exon
so has part: feature:885173-885350:1:exon
so has part: feature:885679-885765:1:exon
so has part: feature:885899-886063:1:exon
so has part: feature:886508-886650:1:exon
so has part: feature:887366-887507:1:exon
so has part: feature:887978-888171:1:exon
so has part: feature:888408-889948:1:exon
so has part: feature:890170-890366:1:exon
so has part: feature:890840-890991:1:exon
so has part: feature:891076-891223:1:exon
so has part: feature:892339-892610:1:exon
so has part: feature:892931-893039:1:exon
so has part: feature:893422-893537:1:exon
so has part: feature:893947-895763:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:870245-870256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870567-870674:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:881701-881863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:882627-882665:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:883136-883227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:883420-883609:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:883776-883916:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:884465-884635:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:885173-885350:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:885679-885765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:885899-886063:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:886508-886650:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887366-887507:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:887978-888171:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:888408-889948:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:890170-890366:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:890840-890991:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:891076-891223:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:892339-892610:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:892931-893039:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:893422-893537:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:893947-895763:1:exon

position:893947:1
position: 893947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UHRF1BP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: UHRF1BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UHRF1-binding protein 1 isoform X1
translation: MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGQGQLTNLELDEEVLQNVLELPTWLAITRVYCNKASIRIQWTKLKTHPICLYLDKVEVEMRTCEEPRPPNGQSPIALAAGQSEYGFAEKVVEGMFIVVNSITIKIHSKAFHASFELWQLQGYSVNPNWQQSDLRLTRITDPQRGEVLTFKELTWQTLRIEADATENGDQDPITTPLRLITNQGRIQISLKRRTKDCNVVASKLMFLLDDLLWVLTDSQLKAMMKYAESLSEAMEKSAQQRKSLAPESVQITPPAPSAQQSWAQPFGASPNASSIGQYFDKHDMKESSYHLLISRLDLHICDDSHARESGALKHGMLGGAIQLTFRRMAFDYYPFHRAGDACKHWVRYSEAMETRGQWAKKLVSEFQSKMEKLYEETDPVFARTPLSPFKRKPEPPQSPQKSPPEKGRAPPTSLPRLRHPPWHRLRSSCVVVRVDDLDVHQVSTAGQQTKKPSTLLSCSRKIFKLPDQVSAIHIEFTEYYFPDNQNFPVPCPNLYMQLNGLMLTLDTPSVLWINLFCLDLCRSLEQFKAIYKLEDSGRRDEHVDVRLDGFRLKLSIPVDKKVMDHRDRPRALCVCMSEVTATNTRHAPSCSCQDLQSLFRKFAGSEFFHSSYAEFPRARDRFGLLHTLFLRHAYQVDDRPQRHPGFPQLPHKTSASEDLWSVNFSELSLGFEGAESSKGRALSFIDPFPLSIWACLPKRWGQAQISKRQELATSEVKIKPSASFSNHSKNENLSREHGVCQRSKTDQDLKNIYKAPDTMDVLGESDSEVDDGVDSKELEASADIHVLVSSSVHVKVRLNHYQYLVLLRMKEVLQTLQEQLAQDTQEMTGSPLDPMSVCVGVMFHSAEVALLMAPAPGSVVEPRSPDSDTTSLIESELSPSDSKEGLAAEEKELKSESSSEKGLGSTSELPEDSGIQDTGASVQLERLPRSASDGALTAAPRGKGTEEKGLIEEAHEAVEALVAERPAETSSHPQSPPALPSSPASDTQPSGRGGVALNGQAELIPLRNIEVELSSALHITKDATKEALHATMDLTKEAMSLTKDALSLSRDKMTSTMQRMLSLPPARDSVPKAEEGAVTPGGAGSSRMRFFSMKRTSSQHSFDTTSVDGSGPEDGLSVDSDGSDGFVMLTDSEPSLDPLPSGQLPHAHNDTGSRSSLVAEDEGAVSPEVNSSTSQSEDPSLQLVSVLVLKMNDVNCAIEVQGDDLSVALQVMNVVPEQLNNVGMWQFLRGYVALGEPGVERAASPEAGQPHPEVCLRLESGPSAAAHSPLAERNGFLQVLLHSRCTQLCTSCLTSLAPFLEDEIIPEVIPMEIEVVDAKITLKDDSPPVYPTSPGPVPITLAMDHVVVRRRDDGVFYLTASQGKDSVKQEKPVAVPEEQKAPSEGVSPAPAAGARGLQLKQVPELQRELQTMKLALAEANMDKARLLQEIRKYDPLFQL
SIO_010081: UHRF1BP1
subclass of: SO_0000673
so part of: UHRF1BP1
location: join(870631..870674,881701..881863,882627..882665,883136..883227,883420..883609,883776..883916,884465..884635,885173..885350,885679..885765,885899..886063,886508..886650,887366..887507,887978..888171,888408..889948,890170..890366,890840..890991,891076..891223,892339..892610,892931..893039,893422..893537,893941..894066)
location: region:870631-894066:1
so has part: feature:870631-870674:1:exon
so has part: feature:881701-881863:1:exon
so has part: feature:882627-882665:1:exon
so has part: feature:883136-883227:1:exon
so has part: feature:883420-883609:1:exon
so has part: feature:883776-883916:1:exon
so has part: feature:884465-884635:1:exon
so has part: feature:885173-885350:1:exon
so has part: feature:885679-885765:1:exon
so has part: feature:885899-886063:1:exon
so has part: feature:886508-886650:1:exon
so has part: feature:887366-887507:1:exon
so has part: feature:887978-888171:1:exon
so has part: feature:888408-889948:1:exon
so has part: feature:890170-890366:1:exon
so has part: feature:890840-890991:1:exon
so has part: feature:891076-891223:1:exon
so has part: feature:892339-892610:1:exon
so has part: feature:892931-893039:1:exon
so has part: feature:893422-893537:1:exon
so has part: feature:893941-894066:1:exon

XP_021391666.1
type: Protein
SIO_000068: ncbiprotein

position:870631:1
position: 870631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894066:1
position: 894066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870631-870674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881701-881863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:882627-882665:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:883136-883227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:883420-883609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:883776-883916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884465-884635:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:885173-885350:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:885679-885765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:885899-886063:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:886508-886650:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887366-887507:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887978-888171:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:888408-889948:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:890170-890366:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:890840-890991:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:891076-891223:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:892339-892610:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:892931-893039:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:893422-893537:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:893941-894066:1:exon

UHRF1BP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: UHRF1BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UHRF1-binding protein 1 isoform X2
translation: MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGQGQLTNLELDEEVLQNVLELPTWLAITRVYCNKASIRIQWTKLKTHPICLYLDKVEVEMRTCEEPRPPNGQSPIALAAGQSEYGFAEKVVEGMFIVVNSITIKIHSKAFHASFELWQLQGYSVNPNWQQSDLRLTRITDPQRGEVLTFKELTWQTLRIEADATENGDQDPITTPLRLITNQGRIQISLKRRTKDCNVVASKLMFLLDDLLWVLTDSQLKAMMKYAESLSEAMEKSAQQRKSLAPESVQITPPAPSAQQSWAQPFGASPNASSIGQYFDKHDMKESSYHLLISRLDLHICDDSHARESGALKHGMLGGAIQLTFRRMAFDYYPFHRAGDACKHWVRYSEAMETRGQWAKKLVSEFQSKMEKLYEETDPVFARTPLSPFKRKPEPPQSPQKSPPEKGRAPPTSLPRLRHPPWHRLRSSCVVVRVDDLDVHQVSTAGQQTKKPSTLLSCSRKIFKLPDQVSAIHIEFTEYYFPDNQNFPVPCPNLYMQLNGLMLTLDTPSVLWINLFCLDLCRSLEQFKAIYKLEDSGRRDEHVDVRLDGFRLKLSIPVDKKVMDHRDRPRALCVCMSEVTATNTRHAPSCSCQDLQSLFRKFAGSEFFHSSYAEFPRARDRFGLLHTLFLRHAYQVDDRPQRHPGFPQLPHKTSASEDLWSVNFSELSLGFEGAESSKGRALSFIDPFPLSIWACLPKRWGQAQISKRQELATSEVKIKPSASFSNHSKNENLSREHGVCQRSKTDQDLKNIYKAPDTMDVLGESDSEVDDGVDSKELEASADIHVLVSSSVHVKVRLNHYQYLVLLRMKEVLQTLQEQLAQDTQEMTGSPLDPMSVCVGVMFHSAEVALLMAPAPGSVVEPRSPDSDTTSLIESELSPSDSKEGLAAEEKELKSESSSEKGLGSTSELPEDSGIQDTGASVQLERLPRSASDGALTAAPRGKGTEEKGLIEEAHEAVEALVAERPAETSSHPQSPPALPSSPASDTQPSGRGGVALNGQAELIPLRNIEVELSSALHITKDATKEALHATMDLTKEAMSLTKDALSLSRDKMTSTMQRMLSLPPARDSVPKAEEGAVTPGGAGSSRMRFFSMKRTSSQHSFDTTSVDGSGPEDGLSVDSDGSDGFVMLTDSEPSLDPLPSGQLPHAHNDTGSRSSLVAEDEGAVSPEVNSSTSQSEDPSLQLVSVLVLKMNDVNCAIEVQGDDLSVALQVMNVVPEQLNNVGMWQFLRGYVALGEPGVERAASPEAGQPHPEVCLRLESGPSAAAHSPLAERNGFLQVLLHSRCTQLCTSCLTSLAPFLEDEIIPEVIPMEIEVVDAKITLKDDSPPVYPTSPGPVPITLAMDHVVVRRRDDGVFYLTASQGKDSVKQEKPVAVPEEQKAPSEGVSPAPAAGARGLQQVPELQRELQTMKLALAEANMDKARLLQEIRKYDPLFQL
SIO_010081: UHRF1BP1
subclass of: SO_0000673
so part of: UHRF1BP1
location: join(870631..870674,881701..881863,882627..882665,883136..883227,883420..883609,883776..883916,884465..884635,885173..885350,885679..885765,885899..886063,886508..886650,887366..887507,887978..888171,888408..889948,890170..890366,890840..890991,891076..891223,892339..892610,892931..893039,893422..893537,893947..894066)
location: region:870631-894066:1
so has part: feature:870631-870674:1:exon
so has part: feature:881701-881863:1:exon
so has part: feature:882627-882665:1:exon
so has part: feature:883136-883227:1:exon
so has part: feature:883420-883609:1:exon
so has part: feature:883776-883916:1:exon
so has part: feature:884465-884635:1:exon
so has part: feature:885173-885350:1:exon
so has part: feature:885679-885765:1:exon
so has part: feature:885899-886063:1:exon
so has part: feature:886508-886650:1:exon
so has part: feature:887366-887507:1:exon
so has part: feature:887978-888171:1:exon
so has part: feature:888408-889948:1:exon
so has part: feature:890170-890366:1:exon
so has part: feature:890840-890991:1:exon
so has part: feature:891076-891223:1:exon
so has part: feature:892339-892610:1:exon
so has part: feature:892931-893039:1:exon
so has part: feature:893422-893537:1:exon
so has part: feature:893947-894066:1:exon

XP_021391667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:870631-870674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881701-881863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:882627-882665:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:883136-883227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:883420-883609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:883776-883916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884465-884635:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:885173-885350:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:885679-885765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:885899-886063:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:886508-886650:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887366-887507:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887978-888171:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:888408-889948:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:890170-890366:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:890840-890991:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:891076-891223:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:892339-892610:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:892931-893039:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:893422-893537:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:893947-894066:1:exon

TAF11
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TAF11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(895935..897796)
location: region:895935-897796:-1
so has part: feature:895935-897796:-1:exon
subclass of: SO_0000010

110473429
type: Gene
SIO_000068: ncbigene

position:895935:-1
position: 895935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897796:-1
position: 897796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895935-897796:-1:exon

TAF11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TAF11
product: TATA-box binding protein associated factor 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 3 ESTs, 3 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021535970.1
SIO_010081: TAF11
subclass of: SO_0000673
so part of: TAF11
location: complement(join(895935..896327,896914..897010,897174..897261,897395..897534,897606..897796))
location: region:895935-897796:-1
so has part: feature:897606-897796:-1:exon
so has part: feature:897395-897534:-1:exon
so has part: feature:897174-897261:-1:exon
so has part: feature:896914-897010:-1:exon
so has part: feature:895935-896327:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:897606-897796:-1:exon

position:897606:-1
position: 897606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:897395-897534:-1:exon

position:897395:-1
position: 897395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897534:-1
position: 897534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:897174-897261:-1:exon

position:897174:-1
position: 897174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897261:-1
position: 897261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:896914-897010:-1:exon

position:896914:-1
position: 896914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897010:-1
position: 897010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:895935-896327:-1:exon

position:896327:-1
position: 896327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAF11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TAF11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 11
translation: MADPARDALGAAAAVPEPPPAAASPPEAAAAEAAGEGEVREAGGGSELKAEVADGEVRSAEGEAADAEEPGLQAGAARKVKLELKERKEKKQKVDEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLIQSITGTSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGELPPLQPKHMREAVRRLKARGQIPNSKYKKIIFH
SIO_010081: TAF11
subclass of: SO_0000673
so part of: TAF11
location: complement(join(896197..896327,896914..897010,897174..897261,897395..897534,897606..897773))
location: region:896197-897773:-1
so has part: feature:897606-897773:-1:exon
so has part: feature:897395-897534:-1:exon
so has part: feature:897174-897261:-1:exon
so has part: feature:896914-897010:-1:exon
so has part: feature:896197-896327:-1:exon

XP_021391645.1
type: Protein
SIO_000068: ncbiprotein

position:896197:-1
position: 896197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897773:-1
position: 897773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:897606-897773:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:897395-897534:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:897174-897261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:896914-897010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:896197-896327:-1:exon

ANKS1A
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ANKS1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 898358..971834
location: region:898358-971834:1
so has part: feature:898358-971834:1:exon
subclass of: SO_0000010

110473451
type: Gene
SIO_000068: ncbigene

position:898358:1
position: 898358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971834:1
position: 971834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898358-971834:1:exon

ANKS1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ANKS1A
product: ankyrin repeat and sterile alpha motif domain containing 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021535994.1
SIO_010081: ANKS1A
subclass of: SO_0000673
so part of: ANKS1A
location: join(898358..898563,914311..914391,915102..915258,917016..917078,921553..921849,922460..922535,922819..922920,924141..924236,924321..924517,925959..926051,930024..930141,935495..936060,945280..945346,948967..949073,960892..960990,961324..961476,961598..961705,963273..963437,963766..963891,964017..964088,964488..964574,964897..965034,965658..965828,966969..971834)
location: region:898358-971834:1
so has part: feature:898358-898563:1:exon
so has part: feature:914311-914391:1:exon
so has part: feature:915102-915258:1:exon
so has part: feature:917016-917078:1:exon
so has part: feature:921553-921849:1:exon
so has part: feature:922460-922535:1:exon
so has part: feature:922819-922920:1:exon
so has part: feature:924141-924236:1:exon
so has part: feature:924321-924517:1:exon
so has part: feature:925959-926051:1:exon
so has part: feature:930024-930141:1:exon
so has part: feature:935495-936060:1:exon
so has part: feature:945280-945346:1:exon
so has part: feature:948967-949073:1:exon
so has part: feature:960892-960990:1:exon
so has part: feature:961324-961476:1:exon
so has part: feature:961598-961705:1:exon
so has part: feature:963273-963437:1:exon
so has part: feature:963766-963891:1:exon
so has part: feature:964017-964088:1:exon
so has part: feature:964488-964574:1:exon
so has part: feature:964897-965034:1:exon
so has part: feature:965658-965828:1:exon
so has part: feature:966969-971834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:898358-898563:1:exon

position:898563:1
position: 898563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:914311-914391:1:exon

position:914311:1
position: 914311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914391:1
position: 914391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:915102-915258:1:exon

position:915102:1
position: 915102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915258:1
position: 915258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:917016-917078:1:exon

position:917016:1
position: 917016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917078:1
position: 917078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:921553-921849:1:exon

position:921553:1
position: 921553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921849:1
position: 921849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:922460-922535:1:exon

position:922460:1
position: 922460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922535:1
position: 922535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:922819-922920:1:exon

position:922819:1
position: 922819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922920:1
position: 922920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:924141-924236:1:exon

position:924141:1
position: 924141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924236:1
position: 924236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:924321-924517:1:exon

position:924321:1
position: 924321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924517:1
position: 924517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:925959-926051:1:exon

position:925959:1
position: 925959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926051:1
position: 926051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:930024-930141:1:exon

position:930024:1
position: 930024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930141:1
position: 930141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:935495-936060:1:exon

position:935495:1
position: 935495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936060:1
position: 936060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:945280-945346:1:exon

position:945280:1
position: 945280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945346:1
position: 945346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:948967-949073:1:exon

position:948967:1
position: 948967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949073:1
position: 949073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:960892-960990:1:exon

position:960892:1
position: 960892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960990:1
position: 960990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:961324-961476:1:exon

position:961324:1
position: 961324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961476:1
position: 961476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:961598-961705:1:exon

position:961598:1
position: 961598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961705:1
position: 961705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:963273-963437:1:exon

position:963273:1
position: 963273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963437:1
position: 963437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:963766-963891:1:exon

position:963766:1
position: 963766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963891:1
position: 963891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:964017-964088:1:exon

position:964017:1
position: 964017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964088:1
position: 964088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:964488-964574:1:exon

position:964488:1
position: 964488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964574:1
position: 964574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:964897-965034:1:exon

position:964897:1
position: 964897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965034:1
position: 965034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:965658-965828:1:exon

position:965658:1
position: 965658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965828:1
position: 965828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:966969-971834:1:exon

position:966969:1
position: 966969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANKS1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ANKS1A
product: ankyrin repeat and sterile alpha motif domain containing 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021535995.1
SIO_010081: ANKS1A
subclass of: SO_0000673
so part of: ANKS1A
location: join(898358..898563,914311..914391,915102..915258,917016..917078,921553..921849,922460..922535,922819..922920,924141..924236,924321..924517,925959..926051,930024..930141,935495..936060,945280..945346,948967..949073,960892..960990,961324..961476,961598..961705,963273..963437,963766..963891,964017..964088,964488..964574,964897..965034,965658..965828,966969..967066,967170..971834)
location: region:898358-971834:1
so has part: feature:898358-898563:1:exon
so has part: feature:914311-914391:1:exon
so has part: feature:915102-915258:1:exon
so has part: feature:917016-917078:1:exon
so has part: feature:921553-921849:1:exon
so has part: feature:922460-922535:1:exon
so has part: feature:922819-922920:1:exon
so has part: feature:924141-924236:1:exon
so has part: feature:924321-924517:1:exon
so has part: feature:925959-926051:1:exon
so has part: feature:930024-930141:1:exon
so has part: feature:935495-936060:1:exon
so has part: feature:945280-945346:1:exon
so has part: feature:948967-949073:1:exon
so has part: feature:960892-960990:1:exon
so has part: feature:961324-961476:1:exon
so has part: feature:961598-961705:1:exon
so has part: feature:963273-963437:1:exon
so has part: feature:963766-963891:1:exon
so has part: feature:964017-964088:1:exon
so has part: feature:964488-964574:1:exon
so has part: feature:964897-965034:1:exon
so has part: feature:965658-965828:1:exon
so has part: feature:966969-967066:1:exon
so has part: feature:967170-971834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:898358-898563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:914311-914391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:915102-915258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917016-917078:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:921553-921849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:922460-922535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:922819-922920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:924141-924236:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924321-924517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:925959-926051:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:930024-930141:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:935495-936060:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:945280-945346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:948967-949073:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:960892-960990:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:961324-961476:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:961598-961705:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:963273-963437:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:963766-963891:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:964017-964088:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:964488-964574:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:964897-965034:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:965658-965828:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:966969-967066:1:exon

position:967066:1
position: 967066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:967170-971834:1:exon

position:967170:1
position: 967170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANKS1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ANKS1A
product: ankyrin repeat and sterile alpha motif domain containing 1A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021535997.1
SIO_010081: ANKS1A
subclass of: SO_0000673
so part of: ANKS1A
location: join(898358..898563,914311..914391,915102..915258,921553..921849,922460..922535,922819..922920,924141..924236,924321..924517,925959..926051,930024..930141,935495..936060,945280..945346,948967..949073,960892..960990,961324..961476,961598..961705,963273..963437,963766..963891,964017..964088,964488..964574,964897..965034,965658..965828,966969..971834)
location: region:898358-971834:1
so has part: feature:898358-898563:1:exon
so has part: feature:914311-914391:1:exon
so has part: feature:915102-915258:1:exon
so has part: feature:921553-921849:1:exon
so has part: feature:922460-922535:1:exon
so has part: feature:922819-922920:1:exon
so has part: feature:924141-924236:1:exon
so has part: feature:924321-924517:1:exon
so has part: feature:925959-926051:1:exon
so has part: feature:930024-930141:1:exon
so has part: feature:935495-936060:1:exon
so has part: feature:945280-945346:1:exon
so has part: feature:948967-949073:1:exon
so has part: feature:960892-960990:1:exon
so has part: feature:961324-961476:1:exon
so has part: feature:961598-961705:1:exon
so has part: feature:963273-963437:1:exon
so has part: feature:963766-963891:1:exon
so has part: feature:964017-964088:1:exon
so has part: feature:964488-964574:1:exon
so has part: feature:964897-965034:1:exon
so has part: feature:965658-965828:1:exon
so has part: feature:966969-971834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:898358-898563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:914311-914391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:915102-915258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:921553-921849:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922460-922535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:922819-922920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:924141-924236:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:924321-924517:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:925959-926051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:930024-930141:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:935495-936060:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:945280-945346:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:948967-949073:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:960892-960990:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:961324-961476:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:961598-961705:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:963273-963437:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:963766-963891:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:964017-964088:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:964488-964574:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:964897-965034:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:965658-965828:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:966969-971834:1:exon

ANKS1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ANKS1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SAM domain-containing protein 1A isoform X2
translation: MGKEQELLEAARTGNLPAVEKLLSGKRLSSGFGGSGGGGGGGSAGGGGGGSGGSGGVGHPLSSLLSIWRGPNVNCVDSTGYTPLHHAALNGHKDVVEVLLRNDALTNVADCKGCYPLHLAAWKGDADIVKLLIHQGPSHTKVNEQNALEIKELKKYGPFDPYINAKNNDNETALHCAAQHGHTEVVKVLLEELTDPTMRNNKFETPLDLAALYGRLEVVKMLLNAHPNLLSCNTKKHTPLHLAARNGHKAVVHVLLDAGMDSNYQTEKGSALHEAALFGKTDVVQILLAAGIDVNIKDNRGLTALDIVRELPSQKSQHIAALIEDYTVGKKSAKAVEKSAPAPLAPATDPSGRTSQGDVDKAVTELIIDFDVNPEEESPYEALYNATSCHSLDSLASGRSSDRESVNKEAEPSGLKAAGVRPRERPPPPAKPPPDEEEEQNVEKKTGHSAPCEASAARGKSRGSGAEEEEHPYELLLTAETKKPVAVDRKTKDHRRSSGGRSQDSAESQDIQVPEQFSGLLHGSSPICEISEDPFRLASSAEKGDTEATSRPAAMQPEDAELASSGAARSSPPDPTQTAVYATVQHVSRADPAAPVTPHVPQHPGSAEPEGDRAVGRAHPGSKPKAELKLSRSLSKSDSDLLTCSPTEDDAMGSRSESLSNCSAGKKRLEKSPSFASEWDEIEKIMSSIGEGIDFSQEQHRISGSRMLEQSVGEWLESIGLQQYESKLLLNGFDDVRFLGCNVMEDQDLRDIGIGDPQHRRKLLQAARSLPKLKPLGCDGNSQPSVPAWLDSLGLQDYIQSFLSSGYSSIDTVKNLWELEIVNVLKVNLLGHRKRIIASLADRPYEEPPAKPPRFSQLRCQDLMSQTSSPLSQNDSCTGRSADLLLPSGDTAKRQHDRATEVATYSRAERYKAQEDRRESRLTLRPPSLAAPYAPVQNWQHQPEKLIFESCGYEANYLGSMLIKDLRGTESTQDACAKMRKSTEHMKKIPTIILSITYKGVKFIDASNKNVIAEHEIRNISCAAQDPEDLCTFAYITKDLQTSHHYCHVFSTVDVNLTYEIILTLGQAFEVAYQLALQAQRAKPLGAGAGEMIETKSSKPVPKPRAGMRKSALDPPEVDQDSQSHASVSWVVDPKQDSKRTLSTNCSP
SIO_010081: ANKS1A
subclass of: SO_0000673
so part of: ANKS1A
location: join(898367..898563,914311..914391,915102..915258,917016..917078,921553..921849,922460..922535,922819..922920,924141..924236,924321..924517,925959..926051,930024..930141,935495..936060,945280..945346,948967..949073,960892..960990,961324..961476,961598..961705,963273..963437,963766..963891,964017..964088,964488..964574,964897..965034,965658..965828,966969..967066,967170..967182)
location: region:898367-967182:1
so has part: feature:898367-898563:1:exon
so has part: feature:914311-914391:1:exon
so has part: feature:915102-915258:1:exon
so has part: feature:917016-917078:1:exon
so has part: feature:921553-921849:1:exon
so has part: feature:922460-922535:1:exon
so has part: feature:922819-922920:1:exon
so has part: feature:924141-924236:1:exon
so has part: feature:924321-924517:1:exon
so has part: feature:925959-926051:1:exon
so has part: feature:930024-930141:1:exon
so has part: feature:935495-936060:1:exon
so has part: feature:945280-945346:1:exon
so has part: feature:948967-949073:1:exon
so has part: feature:960892-960990:1:exon
so has part: feature:961324-961476:1:exon
so has part: feature:961598-961705:1:exon
so has part: feature:963273-963437:1:exon
so has part: feature:963766-963891:1:exon
so has part: feature:964017-964088:1:exon
so has part: feature:964488-964574:1:exon
so has part: feature:964897-965034:1:exon
so has part: feature:965658-965828:1:exon
so has part: feature:966969-967066:1:exon
so has part: feature:967170-967182:1:exon

XP_021391670.1
type: Protein
SIO_000068: ncbiprotein

position:898367:1
position: 898367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967182:1
position: 967182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898367-898563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:914311-914391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:915102-915258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917016-917078:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:921553-921849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:922460-922535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:922819-922920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:924141-924236:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924321-924517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:925959-926051:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:930024-930141:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:935495-936060:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:945280-945346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:948967-949073:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:960892-960990:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:961324-961476:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:961598-961705:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:963273-963437:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:963766-963891:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:964017-964088:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:964488-964574:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:964897-965034:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:965658-965828:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:966969-967066:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:967170-967182:1:exon

ANKS1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ANKS1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SAM domain-containing protein 1A isoform X1
translation: MGKEQELLEAARTGNLPAVEKLLSGKRLSSGFGGSGGGGGGGSAGGGGGGSGGSGGVGHPLSSLLSIWRGPNVNCVDSTGYTPLHHAALNGHKDVVEVLLRNDALTNVADCKGCYPLHLAAWKGDADIVKLLIHQGPSHTKVNEQNALEIKELKKYGPFDPYINAKNNDNETALHCAAQHGHTEVVKVLLEELTDPTMRNNKFETPLDLAALYGRLEVVKMLLNAHPNLLSCNTKKHTPLHLAARNGHKAVVHVLLDAGMDSNYQTEKGSALHEAALFGKTDVVQILLAAGIDVNIKDNRGLTALDIVRELPSQKSQHIAALIEDYTVGKKSAKAVEKSAPAPLAPATDPSGRTSQGDVDKAVTELIIDFDVNPEEESPYEALYNATSCHSLDSLASGRSSDRESVNKEAEPSGLKAAGVRPRERPPPPAKPPPDEEEEQNVEKKTGHSAPCEASAARGKSRGSGAEEEEHPYELLLTAETKKPVAVDRKTKDHRRSSGGRSQDSAESQDIQVPEQFSGLLHGSSPICEISEDPFRLASSAEKGDTEATSRPAAMQPEDAELASSGAARSSPPDPTQTAVYATVQHVSRADPAAPVTPHVPQHPGSAEPEGDRAVGRAHPGSKPKAELKLSRSLSKSDSDLLTCSPTEDDAMGSRSESLSNCSAGKKRLEKSPSFASEWDEIEKIMSSIGEGIDFSQEQHRISGSRMLEQSVGEWLESIGLQQYESKLLLNGFDDVRFLGCNVMEDQDLRDIGIGDPQHRRKLLQAARSLPKLKPLGCDGNSQPSVPAWLDSLGLQDYIQSFLSSGYSSIDTVKNLWELEIVNVLKVNLLGHRKRIIASLADRPYEEPPAKPPRFSQLRCQDLMSQTSSPLSQNDSCTGRSADLLLPSGDTAKRQHDRATEVATYSRAERYKAQEDRRESRLTLRPPSLAAPYAPVQNWQHQPEKLIFESCGYEANYLGSMLIKDLRGTESTQDACAKMRKSTEHMKKIPTIILSITYKGVKFIDASNKNVIAEHEIRNISCAAQDPEDLCTFAYITKDLQTSHHYCHVFSTVDVNLTYEIILTLGQAFEVAYQLALQAQRAKPLGAGAGEMIETKSSKPVPKPRAGMRKSALDPPEVDQDSQSHASVSWVVDPKQDSKRTLSTKYETTIF
SIO_010081: ANKS1A
subclass of: SO_0000673
so part of: ANKS1A
location: join(898367..898563,914311..914391,915102..915258,917016..917078,921553..921849,922460..922535,922819..922920,924141..924236,924321..924517,925959..926051,930024..930141,935495..936060,945280..945346,948967..949073,960892..960990,961324..961476,961598..961705,963273..963437,963766..963891,964017..964088,964488..964574,964897..965034,965658..965828,966969..967088)
location: region:898367-967088:1
so has part: feature:898367-898563:1:exon
so has part: feature:914311-914391:1:exon
so has part: feature:915102-915258:1:exon
so has part: feature:917016-917078:1:exon
so has part: feature:921553-921849:1:exon
so has part: feature:922460-922535:1:exon
so has part: feature:922819-922920:1:exon
so has part: feature:924141-924236:1:exon
so has part: feature:924321-924517:1:exon
so has part: feature:925959-926051:1:exon
so has part: feature:930024-930141:1:exon
so has part: feature:935495-936060:1:exon
so has part: feature:945280-945346:1:exon
so has part: feature:948967-949073:1:exon
so has part: feature:960892-960990:1:exon
so has part: feature:961324-961476:1:exon
so has part: feature:961598-961705:1:exon
so has part: feature:963273-963437:1:exon
so has part: feature:963766-963891:1:exon
so has part: feature:964017-964088:1:exon
so has part: feature:964488-964574:1:exon
so has part: feature:964897-965034:1:exon
so has part: feature:965658-965828:1:exon
so has part: feature:966969-967088:1:exon

XP_021391669.1
type: Protein
SIO_000068: ncbiprotein

position:967088:1
position: 967088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898367-898563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:914311-914391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:915102-915258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917016-917078:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:921553-921849:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:922460-922535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:922819-922920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:924141-924236:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924321-924517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:925959-926051:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:930024-930141:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:935495-936060:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:945280-945346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:948967-949073:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:960892-960990:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:961324-961476:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:961598-961705:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:963273-963437:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:963766-963891:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:964017-964088:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:964488-964574:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:964897-965034:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:965658-965828:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:966969-967088:1:exon

ANKS1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ANKS1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SAM domain-containing protein 1A isoform X3
translation: MGKEQELLEAARTGNLPAVEKLLSGKRLSSGFGGSGGGGGGGSAGGGGGGSGGSGGVGHPLSSLLSIWRGPNVNCVDSTGYTPLHHAALNGHKDVVEVLLRNDALTNVADCKGCYPLHLAAWKGDADIVKLLIHQGPSHTKVNEQNNDNETALHCAAQHGHTEVVKVLLEELTDPTMRNNKFETPLDLAALYGRLEVVKMLLNAHPNLLSCNTKKHTPLHLAARNGHKAVVHVLLDAGMDSNYQTEKGSALHEAALFGKTDVVQILLAAGIDVNIKDNRGLTALDIVRELPSQKSQHIAALIEDYTVGKKSAKAVEKSAPAPLAPATDPSGRTSQGDVDKAVTELIIDFDVNPEEESPYEALYNATSCHSLDSLASGRSSDRESVNKEAEPSGLKAAGVRPRERPPPPAKPPPDEEEEQNVEKKTGHSAPCEASAARGKSRGSGAEEEEHPYELLLTAETKKPVAVDRKTKDHRRSSGGRSQDSAESQDIQVPEQFSGLLHGSSPICEISEDPFRLASSAEKGDTEATSRPAAMQPEDAELASSGAARSSPPDPTQTAVYATVQHVSRADPAAPVTPHVPQHPGSAEPEGDRAVGRAHPGSKPKAELKLSRSLSKSDSDLLTCSPTEDDAMGSRSESLSNCSAGKKRLEKSPSFASEWDEIEKIMSSIGEGIDFSQEQHRISGSRMLEQSVGEWLESIGLQQYESKLLLNGFDDVRFLGCNVMEDQDLRDIGIGDPQHRRKLLQAARSLPKLKPLGCDGNSQPSVPAWLDSLGLQDYIQSFLSSGYSSIDTVKNLWELEIVNVLKVNLLGHRKRIIASLADRPYEEPPAKPPRFSQLRCQDLMSQTSSPLSQNDSCTGRSADLLLPSGDTAKRQHDRATEVATYSRAERYKAQEDRRESRLTLRPPSLAAPYAPVQNWQHQPEKLIFESCGYEANYLGSMLIKDLRGTESTQDACAKMRKSTEHMKKIPTIILSITYKGVKFIDASNKNVIAEHEIRNISCAAQDPEDLCTFAYITKDLQTSHHYCHVFSTVDVNLTYEIILTLGQAFEVAYQLALQAQRAKPLGAGAGEMIETKSSKPVPKPRAGMRKSALDPPEVDQDSQSHASVSWVVDPKQDSKRTLSTKYETTIF
SIO_010081: ANKS1A
subclass of: SO_0000673
so part of: ANKS1A
location: join(898367..898563,914311..914391,915102..915258,921553..921849,922460..922535,922819..922920,924141..924236,924321..924517,925959..926051,930024..930141,935495..936060,945280..945346,948967..949073,960892..960990,961324..961476,961598..961705,963273..963437,963766..963891,964017..964088,964488..964574,964897..965034,965658..965828,966969..967088)
location: region:898367-967088:1
so has part: feature:898367-898563:1:exon
so has part: feature:914311-914391:1:exon
so has part: feature:915102-915258:1:exon
so has part: feature:921553-921849:1:exon
so has part: feature:922460-922535:1:exon
so has part: feature:922819-922920:1:exon
so has part: feature:924141-924236:1:exon
so has part: feature:924321-924517:1:exon
so has part: feature:925959-926051:1:exon
so has part: feature:930024-930141:1:exon
so has part: feature:935495-936060:1:exon
so has part: feature:945280-945346:1:exon
so has part: feature:948967-949073:1:exon
so has part: feature:960892-960990:1:exon
so has part: feature:961324-961476:1:exon
so has part: feature:961598-961705:1:exon
so has part: feature:963273-963437:1:exon
so has part: feature:963766-963891:1:exon
so has part: feature:964017-964088:1:exon
so has part: feature:964488-964574:1:exon
so has part: feature:964897-965034:1:exon
so has part: feature:965658-965828:1:exon
so has part: feature:966969-967088:1:exon

XP_021391672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:898367-898563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:914311-914391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:915102-915258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:921553-921849:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922460-922535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:922819-922920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:924141-924236:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:924321-924517:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:925959-926051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:930024-930141:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:935495-936060:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:945280-945346:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:948967-949073:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:960892-960990:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:961324-961476:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:961598-961705:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:963273-963437:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:963766-963891:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:964017-964088:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:964488-964574:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:964897-965034:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:965658-965828:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:966969-967088:1:exon

LOC116184509
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(935292..936035)
location: region:935292-936035:-1
so has part: feature:935292-936035:-1:exon
subclass of: SO_0000011

116184509
type: Gene
SIO_000068: ncbigene

position:935292:-1
position: 935292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936035:-1
position: 936035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:935292-936035:-1:exon

LOC116184509
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184509
product: uncharacterized LOC116184509
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004149269.1
SIO_010081: LOC116184509
subclass of: SO_0000673
so part of: LOC116184509
location: complement(join(935292..935597,935938..936035))
location: region:935292-936035:-1
so has part: feature:935938-936035:-1:exon
so has part: feature:935292-935597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:935938-936035:-1:exon

position:935938:-1
position: 935938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:935292-935597:-1:exon

position:935597:-1
position: 935597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCUBE3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SCUBE3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 985221..1013825
location: region:985221-1013825:1
so has part: feature:985221-1013825:1:exon
subclass of: SO_0000010

110473460
type: Gene
SIO_000068: ncbigene

position:985221:1
position: 985221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013825:1
position: 1013825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:985221-1013825:1:exon

SCUBE3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SCUBE3
product: signal peptide, CUB domain and EGF like domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021536009.1
SIO_010081: SCUBE3
subclass of: SO_0000673
so part of: SCUBE3
location: join(985221..985538,993873..993995,994930..995055,997818..997952,998920..999045,999984..1000100,1006110..1006226,1007347..1007469,1008649..1008765,1009604..1009726,1009915..1010049,1010328..1010420,1010504..1010620,1010698..1010859,1011113..1011316,1011397..1011558,1011830..1011997,1012086..1012247,1012486..1012683,1013111..1013263,1013441..1013520,1013671..1013825)
location: region:985221-1013825:1
so has part: feature:985221-985538:1:exon
so has part: feature:993873-993995:1:exon
so has part: feature:994930-995055:1:exon
so has part: feature:997818-997952:1:exon
so has part: feature:998920-999045:1:exon
so has part: feature:999984-1000100:1:exon
so has part: feature:1006110-1006226:1:exon
so has part: feature:1007347-1007469:1:exon
so has part: feature:1008649-1008765:1:exon
so has part: feature:1009604-1009726:1:exon
so has part: feature:1009915-1010049:1:exon
so has part: feature:1010328-1010420:1:exon
so has part: feature:1010504-1010620:1:exon
so has part: feature:1010698-1010859:1:exon
so has part: feature:1011113-1011316:1:exon
so has part: feature:1011397-1011558:1:exon
so has part: feature:1011830-1011997:1:exon
so has part: feature:1012086-1012247:1:exon
so has part: feature:1012486-1012683:1:exon
so has part: feature:1013111-1013263:1:exon
so has part: feature:1013441-1013520:1:exon
so has part: feature:1013671-1013825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:985221-985538:1:exon

position:985538:1
position: 985538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:993873-993995:1:exon

position:993873:1
position: 993873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993995:1
position: 993995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:994930-995055:1:exon

position:994930:1
position: 994930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995055:1
position: 995055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:997818-997952:1:exon

position:997818:1
position: 997818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997952:1
position: 997952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:998920-999045:1:exon

position:998920:1
position: 998920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999045:1
position: 999045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:999984-1000100:1:exon

position:999984:1
position: 999984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000100:1
position: 1000100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1006110-1006226:1:exon

position:1006110:1
position: 1006110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006226:1
position: 1006226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1007347-1007469:1:exon

position:1007347:1
position: 1007347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007469:1
position: 1007469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1008649-1008765:1:exon

position:1008649:1
position: 1008649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008765:1
position: 1008765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1009604-1009726:1:exon

position:1009604:1
position: 1009604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009726:1
position: 1009726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1009915-1010049:1:exon

position:1009915:1
position: 1009915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010049:1
position: 1010049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1010328-1010420:1:exon

position:1010328:1
position: 1010328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010420:1
position: 1010420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1010504-1010620:1:exon

position:1010504:1
position: 1010504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010620:1
position: 1010620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1010698-1010859:1:exon

position:1010698:1
position: 1010698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010859:1
position: 1010859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1011113-1011316:1:exon

position:1011113:1
position: 1011113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011316:1
position: 1011316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1011397-1011558:1:exon

position:1011397:1
position: 1011397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011558:1
position: 1011558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1011830-1011997:1:exon

position:1011830:1
position: 1011830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011997:1
position: 1011997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1012086-1012247:1:exon

position:1012086:1
position: 1012086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012247:1
position: 1012247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1012486-1012683:1:exon

position:1012486:1
position: 1012486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012683:1
position: 1012683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1013111-1013263:1:exon

position:1013111:1
position: 1013111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013263:1
position: 1013263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1013441-1013520:1:exon

position:1013441:1
position: 1013441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013520:1
position: 1013520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1013671-1013825:1:exon

position:1013671:1
position: 1013671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCUBE3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SCUBE3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptide, CUB and EGF-like domain-containing protein 3
translation: MGALQIAGFSILFFLLHSGNTLANKASQDVDECVEGTDNCHIDAICQNTPKSYKCICKSGYTGDGKHCKDVDECEREDNAGCVHECVNIPGNYRCTCYDGFRLAHDGHNCLDLDECSEGNGGCQQTCVNMMGSYECFCREGFFLSDNQHTCIQRPEEGMNCMNKNHGCAHICRETPKGGIACECRPGFELTKNQRDCKLTCNYGNGGCQHTCDDTDQGPKCGCHVKFLLHSDGVTCIETCAVNNGGCDSKCHDAATGVHCSCPMGFMLQPDRKTCKDIDECRLNNGGCDHICRNTVGSFECSCKKGYKLLINERNCQDIDECSFDRTCDHLCINTPGSFQCLCHKGYTLYGLTHCGDIDECSINRGGCKFGCINTPGSYQCTCPAGCKLHWNKKDCVAGACPLELVKCLPGSVPPRATLTCNKMGKKDSCALSCTSKARFLPESDSSYTVSCGTPILRQGGQHRPTNSSQQCLETVAAPVKQKASFKIKDAKCHLHPRTKGKQEEAGKAGAQGGSAPCSDCQVTFVNLKCDSSKKGKGRRARNSPNKEVTRITLEFEAEIKPEEITASCNLHCLRQRVEKKLKSAIKALKKSINQERFLLRFSGMEYEVARKLSVAPERQESCGPGQQRLASKCVSCSQGTYYHGQTEQCVPCPPGTYQEKEGQLSCDLCPRGDTFGPIGATNITGCTGQCPPGQHSADGFKPCQPCPRGSYQPEVGRALCFPCGGGLTTRHEGALSFQDCDTKVQCSPGHYYNTSVHRCIRCAVGTYQPDFRQNYCISCPGNTTTDFDGSTSVSQCKNRQCGGELGEYTGYIESPNYPGNYPANIECTWNINPPPKRKILIVVPEIFLPSEDECGDVLVMRKNSSPSSITTYETCQTYERPIAFTARSRKLWINFKTSEANSARGFQIPYVTYDEDYEQLVEDIVRDGRLYASENHQEILKDKKLIKAFFDVLAHPQNYFKYTEKHKEMLPRSFIKLLRSKVSSFLRPYK
SIO_010081: SCUBE3
subclass of: SO_0000673
so part of: SCUBE3
location: join(985454..985538,993873..993995,994930..995055,997818..997952,998920..999045,999984..1000100,1006110..1006226,1007347..1007469,1008649..1008765,1009604..1009726,1009915..1010049,1010328..1010420,1010504..1010620,1010698..1010859,1011113..1011316,1011397..1011558,1011830..1011997,1012086..1012247,1012486..1012683,1013111..1013263,1013441..1013520,1013671..1013820)
location: region:985454-1013820:1
so has part: feature:985454-985538:1:exon
so has part: feature:993873-993995:1:exon
so has part: feature:994930-995055:1:exon
so has part: feature:997818-997952:1:exon
so has part: feature:998920-999045:1:exon
so has part: feature:999984-1000100:1:exon
so has part: feature:1006110-1006226:1:exon
so has part: feature:1007347-1007469:1:exon
so has part: feature:1008649-1008765:1:exon
so has part: feature:1009604-1009726:1:exon
so has part: feature:1009915-1010049:1:exon
so has part: feature:1010328-1010420:1:exon
so has part: feature:1010504-1010620:1:exon
so has part: feature:1010698-1010859:1:exon
so has part: feature:1011113-1011316:1:exon
so has part: feature:1011397-1011558:1:exon
so has part: feature:1011830-1011997:1:exon
so has part: feature:1012086-1012247:1:exon
so has part: feature:1012486-1012683:1:exon
so has part: feature:1013111-1013263:1:exon
so has part: feature:1013441-1013520:1:exon
so has part: feature:1013671-1013820:1:exon

XP_021391684.1
type: Protein
SIO_000068: ncbiprotein

position:985454:1
position: 985454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013820:1
position: 1013820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:985454-985538:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:993873-993995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:994930-995055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:997818-997952:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998920-999045:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:999984-1000100:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1006110-1006226:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1007347-1007469:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1008649-1008765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1009604-1009726:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1009915-1010049:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1010328-1010420:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1010504-1010620:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1010698-1010859:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1011113-1011316:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1011397-1011558:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1011830-1011997:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1012086-1012247:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1012486-1012683:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1013111-1013263:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1013441-1013520:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1013671-1013820:1:exon

RPL10A
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: RPL10A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1017601..1020172)
location: region:1017601-1020172:-1
so has part: feature:1017601-1020172:-1:exon
subclass of: SO_0000010

110473458
type: Gene
SIO_000068: ncbigene

position:1017601:-1
position: 1017601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020172:-1
position: 1020172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1017601-1020172:-1:exon

RPL10A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RPL10A
product: ribosomal protein L10a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 169 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_021536006.1
SIO_010081: RPL10A
subclass of: SO_0000673
so part of: RPL10A
location: complement(join(1017601..1017802,1018540..1018712,1019221..1019369,1019676..1019756,1019838..1019912,1020112..1020172))
location: region:1017601-1020172:-1
so has part: feature:1020112-1020172:-1:exon
so has part: feature:1019838-1019912:-1:exon
so has part: feature:1019676-1019756:-1:exon
so has part: feature:1019221-1019369:-1:exon
so has part: feature:1018540-1018712:-1:exon
so has part: feature:1017601-1017802:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1020112-1020172:-1:exon

position:1020112:-1
position: 1020112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1019838-1019912:-1:exon

position:1019838:-1
position: 1019838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019912:-1
position: 1019912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1019676-1019756:-1:exon

position:1019676:-1
position: 1019676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019756:-1
position: 1019756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1019221-1019369:-1:exon

position:1019221:-1
position: 1019221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019369:-1
position: 1019369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1018540-1018712:-1:exon

position:1018540:-1
position: 1018540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018712:-1
position: 1018712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1017601-1017802:-1:exon

position:1017802:-1
position: 1017802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPL10A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RPL10A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L10a
translation: MSSKVSRDTLYEAVKEVLHGSRAKKRKFVETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCLLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTEDELVYNIHLAINFLVSLLKKNWQNVRALYIKSTMGKPQRLY
SIO_010081: RPL10A
subclass of: SO_0000673
so part of: RPL10A
location: complement(join(1017632..1017802,1018540..1018712,1019221..1019369,1019676..1019756,1019838..1019912,1020112..1020116))
location: region:1017632-1020116:-1
so has part: feature:1020112-1020116:-1:exon
so has part: feature:1019838-1019912:-1:exon
so has part: feature:1019676-1019756:-1:exon
so has part: feature:1019221-1019369:-1:exon
so has part: feature:1018540-1018712:-1:exon
so has part: feature:1017632-1017802:-1:exon

XP_021391681.1
type: Protein
SIO_000068: ncbiprotein

position:1017632:-1
position: 1017632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020116:-1
position: 1020116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020112-1020116:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1019838-1019912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1019676-1019756:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1019221-1019369:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1018540-1018712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1017632-1017802:-1:exon

ZNF76
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ZNF76
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1020884..1029673
location: region:1020884-1029673:1
so has part: feature:1020884-1029673:1:exon
subclass of: SO_0000010

110473461
type: Gene
SIO_000068: ncbigene

position:1020884:1
position: 1020884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029673:1
position: 1029673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020884-1029673:1:exon

ZNF76
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ZNF76
product: zinc finger protein 76
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021536010.2
SIO_010081: ZNF76
subclass of: SO_0000673
so part of: ZNF76
location: join(1020884..1021659,1022836..1022916,1024046..1024123,1024270..1024472,1025475..1025591,1025829..1025904,1026201..1026326,1026428..1026607,1026817..1027050,1027375..1027505,1028222..1028374,1028464..1028577,1028895..1029673)
location: region:1020884-1029673:1
so has part: feature:1020884-1021659:1:exon
so has part: feature:1022836-1022916:1:exon
so has part: feature:1024046-1024123:1:exon
so has part: feature:1024270-1024472:1:exon
so has part: feature:1025475-1025591:1:exon
so has part: feature:1025829-1025904:1:exon
so has part: feature:1026201-1026326:1:exon
so has part: feature:1026428-1026607:1:exon
so has part: feature:1026817-1027050:1:exon
so has part: feature:1027375-1027505:1:exon
so has part: feature:1028222-1028374:1:exon
so has part: feature:1028464-1028577:1:exon
so has part: feature:1028895-1029673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1020884-1021659:1:exon

position:1021659:1
position: 1021659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1022836-1022916:1:exon

position:1022836:1
position: 1022836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022916:1
position: 1022916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1024046-1024123:1:exon

position:1024046:1
position: 1024046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024123:1
position: 1024123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1024270-1024472:1:exon

position:1024270:1
position: 1024270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024472:1
position: 1024472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1025475-1025591:1:exon

position:1025475:1
position: 1025475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025591:1
position: 1025591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1025829-1025904:1:exon

position:1025829:1
position: 1025829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025904:1
position: 1025904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1026201-1026326:1:exon

position:1026201:1
position: 1026201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026326:1
position: 1026326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1026428-1026607:1:exon

position:1026428:1
position: 1026428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026607:1
position: 1026607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1026817-1027050:1:exon

position:1026817:1
position: 1026817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027050:1
position: 1027050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1027375-1027505:1:exon

position:1027375:1
position: 1027375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027505:1
position: 1027505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1028222-1028374:1:exon

position:1028222:1
position: 1028222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028374:1
position: 1028374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1028464-1028577:1:exon

position:1028464:1
position: 1028464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028577:1
position: 1028577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1028895-1029673:1:exon

position:1028895:1
position: 1028895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF76
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ZNF76
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 76
translation: MELFFLLKARSKDDDPVSHGPLALGPSAPRQDPCLGSRGRMESLGLPAVTLGDGTTACLQQAARGEKLIEGQVIELEDGTTAYIHQVTVQKEALAFEDGQPVVLEDGSMAFIHSTAKESYEPGTFQAVQLEDGSTAYIHRPLIVAPGSTILEVQTEPGLQELAGEEEEDGFDVDTMNALQQYGRKELQEEEVQSHRKGQQVGSRAFRCGYKGCGRLYTTAHHLKVHERAHTGDRPYTCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEDMCSKAFKTSGDLQKHIRTHTGERPFKCPFVGCGRSFTTSNIRKVHIRTHTGERPYMCAEPGCGRGFTSATNYKNHMRIHTGEKPYLCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSSCGKTYRQTSTLAMHKRSSHGELEATEESEQALYEQQQLEAAAAADRGSPMKSQHIAFLSEVEEDEEDSVPTQISLISQDGTEQVSLSQEELQALGSAIGVVTQSGVLAVPEGELPGGDTGAMTVASTDGSEAQEVTIVASGAVVSEESDIAPLCHQQVALLATSHGTHIAVQLEEQQSLEEALSMATAVIHYEPVAPDTALPGKGS
SIO_010081: ZNF76
subclass of: SO_0000673
so part of: ZNF76
location: join(1021467..1021659,1022836..1022916,1024046..1024123,1024270..1024472,1025475..1025591,1025829..1025904,1026201..1026326,1026428..1026607,1026817..1027050,1027375..1027505,1028222..1028374,1028464..1028577,1028895..1028999)
location: region:1021467-1028999:1
so has part: feature:1021467-1021659:1:exon
so has part: feature:1022836-1022916:1:exon
so has part: feature:1024046-1024123:1:exon
so has part: feature:1024270-1024472:1:exon
so has part: feature:1025475-1025591:1:exon
so has part: feature:1025829-1025904:1:exon
so has part: feature:1026201-1026326:1:exon
so has part: feature:1026428-1026607:1:exon
so has part: feature:1026817-1027050:1:exon
so has part: feature:1027375-1027505:1:exon
so has part: feature:1028222-1028374:1:exon
so has part: feature:1028464-1028577:1:exon
so has part: feature:1028895-1028999:1:exon

XP_021391685.1
type: Protein
SIO_000068: ncbiprotein

position:1021467:1
position: 1021467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028999:1
position: 1028999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021467-1021659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1022836-1022916:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1024046-1024123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024270-1024472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1025475-1025591:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025829-1025904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1026201-1026326:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1026428-1026607:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1026817-1027050:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1027375-1027505:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028222-1028374:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1028464-1028577:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1028895-1028999:1:exon

DEF6
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: DEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1030333..1040805
location: region:1030333-1040805:1
so has part: feature:1030333-1040805:1:exon
subclass of: SO_0000010

110473452
type: Gene
SIO_000068: ncbigene

position:1030333:1
position: 1030333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040805:1
position: 1040805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1030333-1040805:1:exon

DEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DEF6
product: DEF6 guanine nucleotide exchange factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021535998.1
SIO_010081: DEF6
subclass of: SO_0000673
so part of: DEF6
location: join(1030333..1030468,1034212..1034352,1035784..1035969,1037297..1037524,1037604..1037750,1037918..1038026,1038108..1038406,1038791..1038957,1039154..1039352,1039744..1039834,1040063..1040805)
location: region:1030333-1040805:1
so has part: feature:1030333-1030468:1:exon
so has part: feature:1034212-1034352:1:exon
so has part: feature:1035784-1035969:1:exon
so has part: feature:1037297-1037524:1:exon
so has part: feature:1037604-1037750:1:exon
so has part: feature:1037918-1038026:1:exon
so has part: feature:1038108-1038406:1:exon
so has part: feature:1038791-1038957:1:exon
so has part: feature:1039154-1039352:1:exon
so has part: feature:1039744-1039834:1:exon
so has part: feature:1040063-1040805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1030333-1030468:1:exon

position:1030468:1
position: 1030468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1034212-1034352:1:exon

position:1034212:1
position: 1034212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034352:1
position: 1034352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1035784-1035969:1:exon

position:1035784:1
position: 1035784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035969:1
position: 1035969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1037297-1037524:1:exon

position:1037297:1
position: 1037297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037524:1
position: 1037524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1037604-1037750:1:exon

position:1037604:1
position: 1037604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037750:1
position: 1037750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1037918-1038026:1:exon

position:1037918:1
position: 1037918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038026:1
position: 1038026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1038108-1038406:1:exon

position:1038108:1
position: 1038108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038406:1
position: 1038406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1038791-1038957:1:exon

position:1038791:1
position: 1038791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038957:1
position: 1038957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1039154-1039352:1:exon

position:1039154:1
position: 1039154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039352:1
position: 1039352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1039744-1039834:1:exon

position:1039744:1
position: 1039744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039834:1
position: 1039834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1040063-1040805:1:exon

position:1040063:1
position: 1040063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: differentially expressed in FDCP 6 homolog
translation: MDLRAELLKSIWYAFTALDVEKSGKVSKSQLKVLSHNLYTVLCIPHDPVALEEHFRDDDDGPVSSQGYMPYLNKYILDKVEEGAFVKENFDELCWTLTAKKNYKPDRNGNSLVSHQDAFKLWCLFNFLSEDKYPLVMVPDEVEYLLKKICTAMNVELNSCELDDFLSQEPQGQGGLTVWQFLDMVNSGRFLRGIEQEAISMAVEEVYQEVIEDVLKQGYLWKKGQLRRNWSERWFMLKPSVLSYYMSEERKEKKGSIALDKHCCVEVLPDKDGKRCMFCVKTLSRTYEMSASDTRQRQEWTLAIQTAIRLQAEGKKSLHKDLKQKRREQREQREQRKAAKEEETQRLKQLQEEKERKLQELELLKEAQRQAEILLQEEEQRRRQQHEEMQRTLEIQLREAEQARASMQAEMVLKEAEAERQRKRILELEDMQGRLQEALQQEVKARQDEEAVRCAQARLLAEEEEKLKELMKLKEEQEEYIIKTQREKQVLKQEMENKNKCLEEAQKQLEEVRVNRQRVDQDVMAAQRKLRQASTNVKHWNVQMNRLMHPIGPGDKRTNVSGGVFAGYQPLLSRRDSSLKLKQRVEDKDSDPTRENSKENVSNGGNSSVLPSPDADTMATEPTN
SIO_010081: DEF6
subclass of: SO_0000673
so part of: DEF6
location: join(1030373..1030468,1034212..1034352,1035784..1035969,1037297..1037524,1037604..1037750,1037918..1038026,1038108..1038406,1038791..1038957,1039154..1039352,1039744..1039834,1040063..1040274)
location: region:1030373-1040274:1
so has part: feature:1030373-1030468:1:exon
so has part: feature:1034212-1034352:1:exon
so has part: feature:1035784-1035969:1:exon
so has part: feature:1037297-1037524:1:exon
so has part: feature:1037604-1037750:1:exon
so has part: feature:1037918-1038026:1:exon
so has part: feature:1038108-1038406:1:exon
so has part: feature:1038791-1038957:1:exon
so has part: feature:1039154-1039352:1:exon
so has part: feature:1039744-1039834:1:exon
so has part: feature:1040063-1040274:1:exon

XP_021391673.1
type: Protein
SIO_000068: ncbiprotein

position:1030373:1
position: 1030373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040274:1
position: 1040274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1030373-1030468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1034212-1034352:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1035784-1035969:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1037297-1037524:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1037604-1037750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1037918-1038026:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1038108-1038406:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1038791-1038957:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1039154-1039352:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1039744-1039834:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1040063-1040274:1:exon

PPARD
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PPARD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1044581..1060566
location: region:1044581-1060566:1
so has part: feature:1044581-1060566:1:exon
subclass of: SO_0000010

110473454
type: Gene
SIO_000068: ncbigene

position:1044581:1
position: 1044581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060566:1
position: 1060566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044581-1060566:1:exon

PPARD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PPARD
product: peroxisome proliferator activated receptor delta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021536001.1
SIO_010081: PPARD
subclass of: SO_0000673
so part of: PPARD
location: join(1044581..1044959,1054557..1054785,1055465..1055616,1056305..1056443,1057022..1057224,1057549..1057999,1058399..1060566)
location: region:1044581-1060566:1
so has part: feature:1044581-1044959:1:exon
so has part: feature:1054557-1054785:1:exon
so has part: feature:1055465-1055616:1:exon
so has part: feature:1056305-1056443:1:exon
so has part: feature:1057022-1057224:1:exon
so has part: feature:1057549-1057999:1:exon
so has part: feature:1058399-1060566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1044581-1044959:1:exon

position:1044959:1
position: 1044959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1054557-1054785:1:exon

position:1054557:1
position: 1054557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054785:1
position: 1054785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1055465-1055616:1:exon

position:1055465:1
position: 1055465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055616:1
position: 1055616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1056305-1056443:1:exon

position:1056305:1
position: 1056305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056443:1
position: 1056443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1057022-1057224:1:exon

position:1057022:1
position: 1057022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057224:1
position: 1057224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1057549-1057999:1:exon

position:1057549:1
position: 1057549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057999:1
position: 1057999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1058399-1060566:1:exon

position:1058399:1
position: 1058399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPARD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PPARD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisome proliferator-activated receptor delta
translation: MEQLQEEVPEVKEEEEEEAVMVASGASDPTGGPDSSLPSSSYTDLSQSSSPSLSDQLQMGCEEAALGALNVECRVCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLSLGMSHNAIRFGRMPEAEKRKLVAGLTASEISCQNPQVADLKAFSKHIYNAYLKNFNMTKKKARGILTGKASSTPPFVIHDMDTLWQAEKGLVWKQLVNGIPPYKEIGVHVFYRCQCTTVETVRELTEFAKSIPSFVGLYLNDQVTLLKYGVHEAIFAMLASIMNKDGLLVANGNGFVTREFLRSLRKPFNEIMEPKFEFAVKFNALELDDSDLSLFVAAIILCGDRPGLMNVKQVEEIQDNILRALEFHLQSNHPDAQYLFPKLLQKMADLRQLVTEHAQLVQKIKKTETETSLHPLLQEIYKDMY
SIO_010081: PPARD
subclass of: SO_0000673
so part of: PPARD
location: join(1054656..1054785,1055465..1055616,1056305..1056443,1057022..1057224,1057549..1057999,1058399..1058646)
location: region:1054656-1058646:1
so has part: feature:1054656-1054785:1:exon
so has part: feature:1055465-1055616:1:exon
so has part: feature:1056305-1056443:1:exon
so has part: feature:1057022-1057224:1:exon
so has part: feature:1057549-1057999:1:exon
so has part: feature:1058399-1058646:1:exon

XP_021391676.1
type: Protein
SIO_000068: ncbiprotein

position:1054656:1
position: 1054656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058646:1
position: 1058646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054656-1054785:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1055465-1055616:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1056305-1056443:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1057022-1057224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1057549-1057999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1058399-1058646:1:exon

LOC110473434
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110473434
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1062315..1063935
location: region:1062315-1063935:1
so has part: feature:1062315-1063935:1:exon
subclass of: SO_0000010

110473434
type: Gene
SIO_000068: ncbigene

position:1062315:1
position: 1062315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063935:1
position: 1063935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062315-1063935:1:exon

LOC110473434
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110473434
product: probable E3 ubiquitin-protein ligase makorin-1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 12% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021535971.1
SIO_010081: LOC110473434
subclass of: SO_0000673
so part of: LOC110473434
location: join(1062315..1062501,1062714..1062808,1062920..1063140,1063383..1063493,1063577..1063745,1063798..1063935)
location: region:1062315-1063935:1
so has part: feature:1062315-1062501:1:exon
so has part: feature:1062714-1062808:1:exon
so has part: feature:1062920-1063140:1:exon
so has part: feature:1063383-1063493:1:exon
so has part: feature:1063577-1063745:1:exon
so has part: feature:1063798-1063935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1062315-1062501:1:exon

position:1062501:1
position: 1062501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1062714-1062808:1:exon

position:1062714:1
position: 1062714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062808:1
position: 1062808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1062920-1063140:1:exon

position:1062920:1
position: 1062920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063140:1
position: 1063140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1063383-1063493:1:exon

position:1063383:1
position: 1063383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063493:1
position: 1063493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1063577-1063745:1:exon

position:1063577:1
position: 1063577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063745:1
position: 1063745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1063798-1063935:1:exon

position:1063798:1
position: 1063798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110473434
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110473434
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase makorin-1
translation: MDRDQGGAQCTVAHSRTCVAFKFPKMEAEVEEKDKKNTPSLGNVPHGDISGEFVPTKAQSASGLQPQGPALDPDSSDPKEAILEMATWTGDPAKVPAEPGAVAALATTAALRAQSESVVCGICMDRVYEKPLPEERLFGILPNCSHAYCVGCIRKWRRSRNFQSTVIKACPECRITSNYYIPHKYWISDVGEKEQLIRAFKARTGKIRCKFFLRGHCPFRSECIYLHELPAKCLRRHRQRQLRMPTVSGVAHPGAGLGTGSSSDEEDEELCTLEWALTLAMLETEIPHSSYGHEMLLIDFIDSD
SIO_010081: LOC110473434
subclass of: SO_0000673
so part of: LOC110473434
location: join(1062315..1062501,1062714..1062808,1062920..1063140,1063383..1063493,1063577..1063745,1063798..1063929)
location: region:1062315-1063929:1
so has part: feature:1062315-1062501:1:exon
so has part: feature:1062714-1062808:1:exon
so has part: feature:1062920-1063140:1:exon
so has part: feature:1063383-1063493:1:exon
so has part: feature:1063577-1063745:1:exon
so has part: feature:1063798-1063929:1:exon

XP_021391646.1
type: Protein
SIO_000068: ncbiprotein

position:1063929:1
position: 1063929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062315-1062501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1062714-1062808:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062920-1063140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1063383-1063493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1063577-1063745:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1063798-1063929:1:exon

FANCE
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FANCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1064509..1071644
location: region:1064509-1071644:1
so has part: feature:1064509-1071644:1:exon
subclass of: SO_0000010

110473435
type: Gene
SIO_000068: ncbigene

position:1064509:1
position: 1064509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071644:1
position: 1071644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1064509-1071644:1:exon

FANCE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FANCE
product: FA complementation group E
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021535972.1
SIO_010081: FANCE
subclass of: SO_0000673
so part of: FANCE
location: join(1064509..1064526,1065565..1065802,1066037..1066658,1066741..1066785,1067338..1067397,1067478..1067621,1067697..1067820,1068358..1068433,1068555..1068621,1068717..1068842,1068960..1069054,1069183..1071644)
location: region:1064509-1071644:1
so has part: feature:1064509-1064526:1:exon
so has part: feature:1065565-1065802:1:exon
so has part: feature:1066037-1066658:1:exon
so has part: feature:1066741-1066785:1:exon
so has part: feature:1067338-1067397:1:exon
so has part: feature:1067478-1067621:1:exon
so has part: feature:1067697-1067820:1:exon
so has part: feature:1068358-1068433:1:exon
so has part: feature:1068555-1068621:1:exon
so has part: feature:1068717-1068842:1:exon
so has part: feature:1068960-1069054:1:exon
so has part: feature:1069183-1071644:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1064509-1064526:1:exon

position:1064526:1
position: 1064526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1065565-1065802:1:exon

position:1065565:1
position: 1065565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065802:1
position: 1065802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1066037-1066658:1:exon

position:1066037:1
position: 1066037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066658:1
position: 1066658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1066741-1066785:1:exon

position:1066741:1
position: 1066741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066785:1
position: 1066785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1067338-1067397:1:exon

position:1067338:1
position: 1067338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067397:1
position: 1067397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1067478-1067621:1:exon

position:1067478:1
position: 1067478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067621:1
position: 1067621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1067697-1067820:1:exon

position:1067697:1
position: 1067697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067820:1
position: 1067820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1068358-1068433:1:exon

position:1068358:1
position: 1068358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068433:1
position: 1068433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1068555-1068621:1:exon

position:1068555:1
position: 1068555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068621:1
position: 1068621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1068717-1068842:1:exon

position:1068717:1
position: 1068717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068842:1
position: 1068842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1068960-1069054:1:exon

position:1068960:1
position: 1068960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069054:1
position: 1069054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1069183-1071644:1:exon

position:1069183:1
position: 1069183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FANCE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FANCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group E protein
translation: MEPRCPSWLQLCPRPCRLLLQALSSGPAGAMAALRVLQRGQPHEGPGQPFSWQALTAALCAQEPCLEGPEDSLALKPRLLLLPVLCQRNLLSLLLVVQDAVPRDCLEQLLQALEQDSHVDPWVQTLGDLLRRGLKAEESSPCPPALSSACQQQLKGLCQKIAQKKPEGQRKLNWCFSKQPGAPDYVPQGGKRKEVPEENLELDNEREGKRLLLEEAAFEPLGPQECGDEAGVEEEVPEEPSGDASAQSTDKAARDSSQQDAAGELRKISQTELAAEVQSFVQMHGQGLKMLLLQESSHSELHTLPKLSILNNCSPSQLEGLCSFLQLSTCPEPFLLRFCSWLLALSPDLSYTSAAILAEQLFLRRVLSLTQPPSRHLMAALTSFCSKYSHPFCRVLVAAVLQGPGEGAEQTKLLCELVEECLEPHAVQLVLSQVLEVPLSEKLLPVLQAVLGRQEVLPPELLDLLVLTLCQQAPAFATSLSFAKLVTAVLTACQSQVSPAHRSSLAAVLERSSAALKKSLQAVLEGAR
SIO_010081: FANCE
subclass of: SO_0000673
so part of: FANCE
location: join(1065579..1065802,1066037..1066658,1066741..1066785,1067338..1067397,1067478..1067621,1067697..1067820,1068358..1068433,1068555..1068621,1068717..1068842,1068960..1069054,1069183..1069186)
location: region:1065579-1069186:1
so has part: feature:1065579-1065802:1:exon
so has part: feature:1066037-1066658:1:exon
so has part: feature:1066741-1066785:1:exon
so has part: feature:1067338-1067397:1:exon
so has part: feature:1067478-1067621:1:exon
so has part: feature:1067697-1067820:1:exon
so has part: feature:1068358-1068433:1:exon
so has part: feature:1068555-1068621:1:exon
so has part: feature:1068717-1068842:1:exon
so has part: feature:1068960-1069054:1:exon
so has part: feature:1069183-1069186:1:exon

XP_021391647.1
type: Protein
SIO_000068: ncbiprotein

position:1065579:1
position: 1065579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069186:1
position: 1069186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1065579-1065802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1066037-1066658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1066741-1066785:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067338-1067397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1067478-1067621:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1067697-1067820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1068358-1068433:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1068555-1068621:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1068717-1068842:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1068960-1069054:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1069183-1069186:1:exon

LOC110473436
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110473436
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1072515..1080065
location: region:1072515-1080065:1
so has part: feature:1072515-1080065:1:exon
subclass of: SO_0000010

110473436
type: Gene
SIO_000068: ncbigene

position:1072515:1
position: 1072515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080065:1
position: 1080065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072515-1080065:1:exon

LOC110473436
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110473436
product: protein MRVI1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021535974.1
SIO_010081: LOC110473436
subclass of: SO_0000673
so part of: LOC110473436
location: join(1072515..1072571,1072966..1073229,1074296..1074441,1075289..1075335,1075705..1075781,1076219..1076373,1076615..1076642,1077218..1077358,1077468..1077599,1077877..1078024,1078465..1078517,1079075..1079125,1079226..1079308,1079396..1079509,1079812..1080065)
location: region:1072515-1080065:1
so has part: feature:1072515-1072571:1:exon
so has part: feature:1072966-1073229:1:exon
so has part: feature:1074296-1074441:1:exon
so has part: feature:1075289-1075335:1:exon
so has part: feature:1075705-1075781:1:exon
so has part: feature:1076219-1076373:1:exon
so has part: feature:1076615-1076642:1:exon
so has part: feature:1077218-1077358:1:exon
so has part: feature:1077468-1077599:1:exon
so has part: feature:1077877-1078024:1:exon
so has part: feature:1078465-1078517:1:exon
so has part: feature:1079075-1079125:1:exon
so has part: feature:1079226-1079308:1:exon
so has part: feature:1079396-1079509:1:exon
so has part: feature:1079812-1080065:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1072515-1072571:1:exon

position:1072571:1
position: 1072571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1072966-1073229:1:exon

position:1072966:1
position: 1072966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073229:1
position: 1073229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1074296-1074441:1:exon

position:1074296:1
position: 1074296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074441:1
position: 1074441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1075289-1075335:1:exon

position:1075289:1
position: 1075289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075335:1
position: 1075335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1075705-1075781:1:exon

position:1075705:1
position: 1075705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075781:1
position: 1075781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1076219-1076373:1:exon

position:1076219:1
position: 1076219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076373:1
position: 1076373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1076615-1076642:1:exon

position:1076615:1
position: 1076615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076642:1
position: 1076642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1077218-1077358:1:exon

position:1077218:1
position: 1077218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077358:1
position: 1077358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1077468-1077599:1:exon

position:1077468:1
position: 1077468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077599:1
position: 1077599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1077877-1078024:1:exon

position:1077877:1
position: 1077877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078024:1
position: 1078024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1078465-1078517:1:exon

position:1078465:1
position: 1078465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078517:1
position: 1078517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1079075-1079125:1:exon

position:1079075:1
position: 1079075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079125:1
position: 1079125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1079226-1079308:1:exon

position:1079226:1
position: 1079226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079308:1
position: 1079308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1079396-1079509:1:exon

position:1079396:1
position: 1079396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079509:1
position: 1079509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1079812-1080065:1:exon

position:1079812:1
position: 1079812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110473436
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110473436
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MRVI1
translation: MGGNQQQPPGSAEGGARVATTLPALAGAGSSRPLSRISFKGLLSSGSAPQLRSPLCPRGGSASSPEPRSAGRAAPRSRCRLWAPSRAERVRAGLQHLPSAAWEEIGQVCCSWSLGTAQMKPLEGQGEEEAAQAPAQGRRRRQRQRTSCRASPSPRREQQAELSGLTTSPGEGRMSSPQGQPGGVLARSEQSVEQVSQTGGQREEEGQGKALTCGLLWPHCPPADAETPEEPLLSLPSELSVLDRFGLHRVALTEQDLEAAFAHLALAFRCDVFTLQQRVLVEKRARDAAEENIQEELGQCRAALERLGRSCANAGCKETLQQLQHSLAVLSAAVERATSAAEKLGAVHQEARMSRAAEVMVQHVENLKRHQAREHAELEEMKRLIQQNSRNRQLAETQDDVEPRLRPHPLKRTFQQGSARRRVSIAVIPRQLLPGASPESRAAPAGALEPEGAQRWPSSQRTELEPQGQDSAVTGRLVAEADGRGSDTGNEEPEQLGLTSKGSAAELWRPWLFFPQHYWVFFWLLLLSIAFLLLVRALELQRLQSAASSKA
SIO_010081: LOC110473436
subclass of: SO_0000673
so part of: LOC110473436
location: join(1072515..1072571,1072966..1073229,1074296..1074441,1075289..1075335,1075705..1075781,1076219..1076373,1076615..1076642,1077218..1077358,1077468..1077599,1077877..1078024,1078465..1078517,1079075..1079125,1079226..1079308,1079396..1079509,1079812..1079971)
location: region:1072515-1079971:1
so has part: feature:1072515-1072571:1:exon
so has part: feature:1072966-1073229:1:exon
so has part: feature:1074296-1074441:1:exon
so has part: feature:1075289-1075335:1:exon
so has part: feature:1075705-1075781:1:exon
so has part: feature:1076219-1076373:1:exon
so has part: feature:1076615-1076642:1:exon
so has part: feature:1077218-1077358:1:exon
so has part: feature:1077468-1077599:1:exon
so has part: feature:1077877-1078024:1:exon
so has part: feature:1078465-1078517:1:exon
so has part: feature:1079075-1079125:1:exon
so has part: feature:1079226-1079308:1:exon
so has part: feature:1079396-1079509:1:exon
so has part: feature:1079812-1079971:1:exon

XP_021391649.1
type: Protein
SIO_000068: ncbiprotein

position:1079971:1
position: 1079971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072515-1072571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1072966-1073229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074296-1074441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075289-1075335:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1075705-1075781:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1076219-1076373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1076615-1076642:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1077218-1077358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1077468-1077599:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1077877-1078024:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1078465-1078517:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1079075-1079125:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1079226-1079308:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1079396-1079509:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1079812-1079971:1:exon

MICAL1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MICAL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1085169..1093823
location: region:1085169-1093823:1
so has part: feature:1085169-1093823:1:exon
subclass of: SO_0000010

110473459
type: Gene
SIO_000068: ncbigene

position:1085169:1
position: 1085169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093823:1
position: 1093823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1085169-1093823:1:exon

MICAL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MICAL1
product: microtubule associated monooxygenase, calponin and LIM domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021536008.2
SIO_010081: MICAL1
subclass of: SO_0000673
so part of: MICAL1
location: join(1085169..1085187,1085265..1085543,1086197..1086404,1086487..1086594,1086765..1086863,1086941..1087096,1087303..1087403,1087669..1087926,1088323..1088438,1088521..1088647,1088919..1088991,1089395..1089545,1089618..1089805,1089912..1090018,1090101..1090151,1090249..1090326,1090653..1090827,1090922..1091004,1091114..1091567,1091686..1091777,1091941..1092039,1092156..1092249,1092327..1092426,1092537..1092610,1092715..1093823)
location: region:1085169-1093823:1
so has part: feature:1085169-1085187:1:exon
so has part: feature:1085265-1085543:1:exon
so has part: feature:1086197-1086404:1:exon
so has part: feature:1086487-1086594:1:exon
so has part: feature:1086765-1086863:1:exon
so has part: feature:1086941-1087096:1:exon
so has part: feature:1087303-1087403:1:exon
so has part: feature:1087669-1087926:1:exon
so has part: feature:1088323-1088438:1:exon
so has part: feature:1088521-1088647:1:exon
so has part: feature:1088919-1088991:1:exon
so has part: feature:1089395-1089545:1:exon
so has part: feature:1089618-1089805:1:exon
so has part: feature:1089912-1090018:1:exon
so has part: feature:1090101-1090151:1:exon
so has part: feature:1090249-1090326:1:exon
so has part: feature:1090653-1090827:1:exon
so has part: feature:1090922-1091004:1:exon
so has part: feature:1091114-1091567:1:exon
so has part: feature:1091686-1091777:1:exon
so has part: feature:1091941-1092039:1:exon
so has part: feature:1092156-1092249:1:exon
so has part: feature:1092327-1092426:1:exon
so has part: feature:1092537-1092610:1:exon
so has part: feature:1092715-1093823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1085169-1085187:1:exon

position:1085187:1
position: 1085187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1085265-1085543:1:exon

position:1085265:1
position: 1085265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085543:1
position: 1085543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1086197-1086404:1:exon

position:1086197:1
position: 1086197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086404:1
position: 1086404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1086487-1086594:1:exon

position:1086487:1
position: 1086487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086594:1
position: 1086594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1086765-1086863:1:exon

position:1086765:1
position: 1086765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086863:1
position: 1086863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1086941-1087096:1:exon

position:1086941:1
position: 1086941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087096:1
position: 1087096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1087303-1087403:1:exon

position:1087303:1
position: 1087303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087403:1
position: 1087403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1087669-1087926:1:exon

position:1087669:1
position: 1087669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087926:1
position: 1087926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1088323-1088438:1:exon

position:1088323:1
position: 1088323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088438:1
position: 1088438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1088521-1088647:1:exon

position:1088521:1
position: 1088521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088647:1
position: 1088647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1088919-1088991:1:exon

position:1088919:1
position: 1088919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088991:1
position: 1088991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1089395-1089545:1:exon

position:1089395:1
position: 1089395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089545:1
position: 1089545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1089618-1089805:1:exon

position:1089618:1
position: 1089618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089805:1
position: 1089805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1089912-1090018:1:exon

position:1089912:1
position: 1089912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090018:1
position: 1090018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1090101-1090151:1:exon

position:1090101:1
position: 1090101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090151:1
position: 1090151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1090249-1090326:1:exon

position:1090249:1
position: 1090249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090326:1
position: 1090326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1090653-1090827:1:exon

position:1090653:1
position: 1090653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090827:1
position: 1090827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1090922-1091004:1:exon

position:1090922:1
position: 1090922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091004:1
position: 1091004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1091114-1091567:1:exon

position:1091114:1
position: 1091114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091567:1
position: 1091567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1091686-1091777:1:exon

position:1091686:1
position: 1091686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091777:1
position: 1091777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1091941-1092039:1:exon

position:1091941:1
position: 1091941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092039:1
position: 1092039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1092156-1092249:1:exon

position:1092156:1
position: 1092156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092249:1
position: 1092249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1092327-1092426:1:exon

position:1092327:1
position: 1092327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092426:1
position: 1092426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1092537-1092610:1:exon

position:1092537:1
position: 1092537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092610:1
position: 1092610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1092715-1093823:1:exon

position:1092715:1
position: 1092715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MICAL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MICAL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-actin-monooxygenase MICAL1
translation: MSVPADEPGNPAHAIFERFLRAGECREVLRCFVELCQQLGLQGSGLQLYHGLKAALNYWNAKALWSKLDKKAGHKDYDQGTACAGTKCLVVGAGPCGLRAAIELALLGARVVLLEKRDSFSRNNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLILLKVALLLGVEVHINVRFEGLVPPTGKAGGWQAVLQPSSSPLTNYEFDVLISAGGGKFVPEGFKRKETRGKLAIGITTNFINRHSRAEVEVAEISGVARIYNQKFFQNLYNKTGIDLENIVYYKDDTHYFVMTAKKQSLLKKGVILQDKADIESLLAPENVNRDALLSYAKEAANFSTNYCLPQLEFALNHRGLPDVDMFDFTCMTRSENAALVREHNGSRVLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMVRRWAAGTPPLEVLAERESIYQRLSQTSPDNTNKNISQYSIDPATRYPNINPQAIKASQVRDLYLVGMVEVDHKRKSENRLSTVAPGAVSEELLSWCQASTAGYPGVAVTNFSTSWTSGLALCALIHRFRPDLVDFDSVEPQDAIRTHQMLLDIAEQELGIQPVLSSVEMATMTEPDRLGLITYLSHFYQIFGTSPEVEVSKKPLSPRGTRGALLFLSKLQKSRTLAHKRSQDGAQKDSEVKRSRRDTELDTGLDGDTQDSAHKPPQATVMDPGQPPRERAGENSDACYFCGRRVYIVERASAEGRFFHRGCFQCRRCGATLRLGDYAFDEEDGNFYCSLHYPNPAGMDLPRDEASALPDGDADAAAHPPPDAGRSGVSPVAWAPSPLQPTPAAPQAGAEPGDAEDTADTGDMEEQELLAQPGGNVREEEAPRAEPQGTAEEGEESGGRRKIVLTPLEKLCLSTLNLTSEAEPEPPPKPARLRLQAAPEALPALRQGQGAWKEEEEKTDMEKDLEESDSEEGEGEEEEKEEEEDTGLGIMKEMYPDPREEEKYPTWKRTLARRARESQMKRFCRAQAIQRRLEEIEVTFRELEQQGIKLEKLLRDENESPADQQTQWTNQLLYLVQKKNNLMTEESDLMIAVQELKLEEQQCQLDKKLRSYMNKEDALKTPEDEKAEQEILKQLVEVVNKRNVLIQLQEEKRLSELRA
SIO_010081: MICAL1
subclass of: SO_0000673
so part of: MICAL1
location: join(1085283..1085543,1086197..1086404,1086487..1086594,1086765..1086863,1086941..1087096,1087303..1087403,1087669..1087926,1088323..1088438,1088521..1088647,1088919..1088991,1089395..1089545,1089618..1089805,1089912..1090018,1090101..1090151,1090249..1090326,1090653..1090827,1090922..1091004,1091114..1091567,1091686..1091777,1091941..1092039,1092156..1092249,1092327..1092426,1092537..1092610,1092715..1092845)
location: region:1085283-1092845:1
so has part: feature:1085283-1085543:1:exon
so has part: feature:1086197-1086404:1:exon
so has part: feature:1086487-1086594:1:exon
so has part: feature:1086765-1086863:1:exon
so has part: feature:1086941-1087096:1:exon
so has part: feature:1087303-1087403:1:exon
so has part: feature:1087669-1087926:1:exon
so has part: feature:1088323-1088438:1:exon
so has part: feature:1088521-1088647:1:exon
so has part: feature:1088919-1088991:1:exon
so has part: feature:1089395-1089545:1:exon
so has part: feature:1089618-1089805:1:exon
so has part: feature:1089912-1090018:1:exon
so has part: feature:1090101-1090151:1:exon
so has part: feature:1090249-1090326:1:exon
so has part: feature:1090653-1090827:1:exon
so has part: feature:1090922-1091004:1:exon
so has part: feature:1091114-1091567:1:exon
so has part: feature:1091686-1091777:1:exon
so has part: feature:1091941-1092039:1:exon
so has part: feature:1092156-1092249:1:exon
so has part: feature:1092327-1092426:1:exon
so has part: feature:1092537-1092610:1:exon
so has part: feature:1092715-1092845:1:exon

XP_021391683.1
type: Protein
SIO_000068: ncbiprotein

position:1085283:1
position: 1085283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092845:1
position: 1092845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1085283-1085543:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1086197-1086404:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1086487-1086594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086765-1086863:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086941-1087096:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1087303-1087403:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087669-1087926:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088323-1088438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1088521-1088647:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1088919-1088991:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1089395-1089545:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1089618-1089805:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1089912-1090018:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1090101-1090151:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1090249-1090326:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1090653-1090827:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1090922-1091004:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1091114-1091567:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1091686-1091777:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1091941-1092039:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1092156-1092249:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1092327-1092426:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1092537-1092610:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1092715-1092845:1:exon

SMPD2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SMPD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1093819..1097290)
location: region:1093819-1097290:-1
so has part: feature:1093819-1097290:-1:exon
subclass of: SO_0000010

110473437
type: Gene
SIO_000068: ncbigene

position:1093819:-1
position: 1093819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097290:-1
position: 1097290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093819-1097290:-1:exon

SMPD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SMPD2
product: sphingomyelin phosphodiesterase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021535975.2
SIO_010081: SMPD2
subclass of: SO_0000673
so part of: SMPD2
location: complement(join(1093819..1094531,1094753..1094909,1094987..1095091,1095162..1095294,1095464..1095546,1095864..1095953,1096042..1096135,1096346..1096422,1096509..1096605,1097057..1097290))
location: region:1093819-1097290:-1
so has part: feature:1097057-1097290:-1:exon
so has part: feature:1096509-1096605:-1:exon
so has part: feature:1096346-1096422:-1:exon
so has part: feature:1096042-1096135:-1:exon
so has part: feature:1095864-1095953:-1:exon
so has part: feature:1095464-1095546:-1:exon
so has part: feature:1095162-1095294:-1:exon
so has part: feature:1094987-1095091:-1:exon
so has part: feature:1094753-1094909:-1:exon
so has part: feature:1093819-1094531:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1097057-1097290:-1:exon

position:1097057:-1
position: 1097057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1096509-1096605:-1:exon

position:1096509:-1
position: 1096509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096605:-1
position: 1096605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1096346-1096422:-1:exon

position:1096346:-1
position: 1096346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096422:-1
position: 1096422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1096042-1096135:-1:exon

position:1096042:-1
position: 1096042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096135:-1
position: 1096135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1095864-1095953:-1:exon

position:1095864:-1
position: 1095864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095953:-1
position: 1095953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1095464-1095546:-1:exon

position:1095464:-1
position: 1095464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095546:-1
position: 1095546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1095162-1095294:-1:exon

position:1095162:-1
position: 1095162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095294:-1
position: 1095294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1094987-1095091:-1:exon

position:1094987:-1
position: 1094987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095091:-1
position: 1095091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1094753-1094909:-1:exon

position:1094753:-1
position: 1094753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1094909:-1
position: 1094909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1093819-1094531:-1:exon

position:1094531:-1
position: 1094531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMPD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SMPD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingomyelin phosphodiesterase 2
translation: MEGEPTLRLRIFDLNCWAIRYLSKRRQERVRLIGDTLRQEGFDLVLLQEVWSEQDYSDLKVKLAGCYPFSHYFRSGVIGSGLCVFSRFPILDTLLYQYSLNGYPYMLQHGDWFCGKSVGLVIMKISGIIFNIYVTHLHAEYCRDKDAYLPHRLVQAWELAQFIRHTSKAADVVLLGGDLNMHPEDVGIRLLRGWTGLRDAFAEATHFEGCKNGCTLVPDNCFTDKSELLPFPLGIRIDYILYKAISSFTVKCEELKTTVGRAPGVDIPFSDHEAVMATLHIQRQGQPAGATLGTADPALADVVTEARTEVGVGLQAARQQRYSSGRMAVLALLLLLLQAVAALGTLAGLGTEQPFPKLSFCLLAFLALGVLVLASGLHLFHTMEVKMLHGTEDQMWMVLRALQERPSEG
SIO_010081: SMPD2
subclass of: SO_0000673
so part of: SMPD2
location: complement(join(1094188..1094531,1094753..1094909,1094987..1095091,1095162..1095294,1095464..1095546,1095864..1095953,1096042..1096135,1096346..1096422,1096509..1096605,1097057..1097106))
location: region:1094188-1097106:-1
so has part: feature:1097057-1097106:-1:exon
so has part: feature:1096509-1096605:-1:exon
so has part: feature:1096346-1096422:-1:exon
so has part: feature:1096042-1096135:-1:exon
so has part: feature:1095864-1095953:-1:exon
so has part: feature:1095464-1095546:-1:exon
so has part: feature:1095162-1095294:-1:exon
so has part: feature:1094987-1095091:-1:exon
so has part: feature:1094753-1094909:-1:exon
so has part: feature:1094188-1094531:-1:exon

XP_021391650.1
type: Protein
SIO_000068: ncbiprotein

position:1094188:-1
position: 1094188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097106:-1
position: 1097106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1097057-1097106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1096509-1096605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1096346-1096422:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096042-1096135:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1095864-1095953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1095464-1095546:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1095162-1095294:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1094987-1095091:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1094753-1094909:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1094188-1094531:-1:exon

TEAD3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TEAD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1101656..1113803)
location: region:1101656-1113803:-1
so has part: feature:1101656-1113803:-1:exon
subclass of: SO_0000010

110473456
type: Gene
SIO_000068: ncbigene

position:1101656:-1
position: 1101656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113803:-1
position: 1113803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1101656-1113803:-1:exon

TEAD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TEAD3
product: TEA domain transcription factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021536004.2
SIO_010081: TEAD3
subclass of: SO_0000673
so part of: TEAD3
location: complement(join(1101656..1101967,1102490..1102642,1102844..1102984,1103832..1104005,1104119..1104252,1104562..1104623,1104726..1104769,1104976..1105113,1105448..1105459,1108198..1108260,1110150..1110214,1113559..1113803))
location: region:1101656-1113803:-1
so has part: feature:1113559-1113803:-1:exon
so has part: feature:1110150-1110214:-1:exon
so has part: feature:1108198-1108260:-1:exon
so has part: feature:1105448-1105459:-1:exon
so has part: feature:1104976-1105113:-1:exon
so has part: feature:1104726-1104769:-1:exon
so has part: feature:1104562-1104623:-1:exon
so has part: feature:1104119-1104252:-1:exon
so has part: feature:1103832-1104005:-1:exon
so has part: feature:1102844-1102984:-1:exon
so has part: feature:1102490-1102642:-1:exon
so has part: feature:1101656-1101967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1113559-1113803:-1:exon

position:1113559:-1
position: 1113559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1110150-1110214:-1:exon

position:1110150:-1
position: 1110150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110214:-1
position: 1110214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1108198-1108260:-1:exon

position:1108198:-1
position: 1108198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108260:-1
position: 1108260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1105448-1105459:-1:exon

position:1105448:-1
position: 1105448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105459:-1
position: 1105459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1104976-1105113:-1:exon

position:1104976:-1
position: 1104976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105113:-1
position: 1105113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1104726-1104769:-1:exon

position:1104726:-1
position: 1104726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104769:-1
position: 1104769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1104562-1104623:-1:exon

position:1104562:-1
position: 1104562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104623:-1
position: 1104623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1104119-1104252:-1:exon

position:1104119:-1
position: 1104119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104252:-1
position: 1104252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1103832-1104005:-1:exon

position:1103832:-1
position: 1103832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104005:-1
position: 1104005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1102844-1102984:-1:exon

position:1102844:-1
position: 1102844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102984:-1
position: 1102984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1102490-1102642:-1:exon

position:1102490:-1
position: 1102490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102642:-1
position: 1102642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1101656-1101967:-1:exon

position:1101967:-1
position: 1101967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TEAD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TEAD3
product: TEA domain transcription factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021536003.2
SIO_010081: TEAD3
subclass of: SO_0000673
so part of: TEAD3
location: complement(join(1101656..1101967,1102490..1102642,1102844..1102984,1103832..1104005,1104119..1104222,1104562..1104623,1104726..1104769,1104976..1105113,1105448..1105459,1108198..1108260,1110150..1110214,1113559..1113781))
location: region:1101656-1113781:-1
so has part: feature:1113559-1113781:-1:exon
so has part: feature:1110150-1110214:-1:exon
so has part: feature:1108198-1108260:-1:exon
so has part: feature:1105448-1105459:-1:exon
so has part: feature:1104976-1105113:-1:exon
so has part: feature:1104726-1104769:-1:exon
so has part: feature:1104562-1104623:-1:exon
so has part: feature:1104119-1104222:-1:exon
so has part: feature:1103832-1104005:-1:exon
so has part: feature:1102844-1102984:-1:exon
so has part: feature:1102490-1102642:-1:exon
so has part: feature:1101656-1101967:-1:exon

position:1113781:-1
position: 1113781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113559-1113781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1110150-1110214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1108198-1108260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1105448-1105459:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1104976-1105113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1104726-1104769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1104562-1104623:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1104119-1104222:-1:exon

position:1104222:-1
position: 1104222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1103832-1104005:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1102844-1102984:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1102490-1102642:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1101656-1101967:-1:exon

TEAD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TEAD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional enhancer factor TEF-5 isoform X1
translation: MDKSLDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHLQVLARRKSREIQSKLKAMNLDQVSKDKALQSMASMSSAQIVSASVLQNKLSPPPPLPQAVFSAAPRFWSGPIPGQPGPSQDIKPFAQPAYPIQPPIPPSLATASAVPVWQDRTIASAKLRLLEYSAFMEVPRDAETYSKHLFVHIGQTNPSYSDPLLEAVDIRQIYDKFPEKKGGLKELYERGPQNSFFLVKFWADLNSTIQDGPGTFYGVSSQYSSAENMTITVSTKVCSFGKQVVEKVETEYARLENGRFVYRIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAFVFEVSTSEHGAQHHVYKLVKD
SIO_010081: TEAD3
subclass of: SO_0000673
so part of: TEAD3
location: complement(join(1101854..1101967,1102490..1102642,1102844..1102984,1103832..1104005,1104119..1104222,1104562..1104623,1104726..1104769,1104976..1105113,1105448..1105459,1108198..1108260,1110150..1110214,1113559..1113694))
location: region:1101854-1113694:-1
so has part: feature:1113559-1113694:-1:exon
so has part: feature:1110150-1110214:-1:exon
so has part: feature:1108198-1108260:-1:exon
so has part: feature:1105448-1105459:-1:exon
so has part: feature:1104976-1105113:-1:exon
so has part: feature:1104726-1104769:-1:exon
so has part: feature:1104562-1104623:-1:exon
so has part: feature:1104119-1104222:-1:exon
so has part: feature:1103832-1104005:-1:exon
so has part: feature:1102844-1102984:-1:exon
so has part: feature:1102490-1102642:-1:exon
so has part: feature:1101854-1101967:-1:exon

XP_021391678.1
type: Protein
SIO_000068: ncbiprotein

position:1101854:-1
position: 1101854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113694:-1
position: 1113694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113559-1113694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1110150-1110214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1108198-1108260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1105448-1105459:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1104976-1105113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1104726-1104769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1104562-1104623:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1104119-1104222:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1103832-1104005:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1102844-1102984:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1102490-1102642:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1101854-1101967:-1:exon

TEAD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TEAD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional enhancer factor TEF-5 isoform X2
translation: MDKSLDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHLQVLARRKSREIQSKLKAMNLDQVSKDKALQSMASMSSAQIVSASVLQNKLSPPPPLPQAVFSAAPRFWSGPIPGQPGPSQDIKPFAQPAYPIQPPIPPSLASYEPLAPLPPAASAVPVWQDRTIASAKLRLLEYSAFMEVPRDAETYSKHLFVHIGQTNPSYSDPLLEAVDIRQIYDKFPEKKGGLKELYERGPQNSFFLVKFWADLNSTIQDGPGTFYGVSSQYSSAENMTITVSTKVCSFGKQVVEKVETEYARLENGRFVYRIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAFVFEVSTSEHGAQHHVYKLVKD
SIO_010081: TEAD3
subclass of: SO_0000673
so part of: TEAD3
location: complement(join(1101854..1101967,1102490..1102642,1102844..1102984,1103832..1104005,1104119..1104252,1104562..1104623,1104726..1104769,1104976..1105113,1105448..1105459,1108198..1108260,1110150..1110214,1113559..1113694))
location: region:1101854-1113694:-1
so has part: feature:1113559-1113694:-1:exon
so has part: feature:1110150-1110214:-1:exon
so has part: feature:1108198-1108260:-1:exon
so has part: feature:1105448-1105459:-1:exon
so has part: feature:1104976-1105113:-1:exon
so has part: feature:1104726-1104769:-1:exon
so has part: feature:1104562-1104623:-1:exon
so has part: feature:1104119-1104252:-1:exon
so has part: feature:1103832-1104005:-1:exon
so has part: feature:1102844-1102984:-1:exon
so has part: feature:1102490-1102642:-1:exon
so has part: feature:1101854-1101967:-1:exon

XP_021391679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1113559-1113694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1110150-1110214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1108198-1108260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1105448-1105459:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1104976-1105113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1104726-1104769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1104562-1104623:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1104119-1104252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1103832-1104005:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1102844-1102984:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1102490-1102642:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1101854-1101967:-1:exon

TULP1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TULP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1130213..1133915)
location: region:1130213-1133915:-1
so has part: feature:1130213-1133915:-1:exon
subclass of: SO_0000010

110473457
type: Gene
SIO_000068: ncbigene

position:1130213:-1
position: 1130213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133915:-1
position: 1133915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1130213-1133915:-1:exon

TULP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TULP1
product: TUB like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021536005.2
SIO_010081: TULP1
subclass of: SO_0000673
so part of: TULP1
location: complement(join(1130213..1130356,1131135..1131306,1131589..1131687,1131882..1131990,1132467..1132579,1132883..1133053,1133275..1133369,1133530..1133664,1133771..1133915))
location: region:1130213-1133915:-1
so has part: feature:1133771-1133915:-1:exon
so has part: feature:1133530-1133664:-1:exon
so has part: feature:1133275-1133369:-1:exon
so has part: feature:1132883-1133053:-1:exon
so has part: feature:1132467-1132579:-1:exon
so has part: feature:1131882-1131990:-1:exon
so has part: feature:1131589-1131687:-1:exon
so has part: feature:1131135-1131306:-1:exon
so has part: feature:1130213-1130356:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1133771-1133915:-1:exon

position:1133771:-1
position: 1133771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1133530-1133664:-1:exon

position:1133530:-1
position: 1133530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133664:-1
position: 1133664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1133275-1133369:-1:exon

position:1133275:-1
position: 1133275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133369:-1
position: 1133369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1132883-1133053:-1:exon

position:1132883:-1
position: 1132883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133053:-1
position: 1133053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1132467-1132579:-1:exon

position:1132467:-1
position: 1132467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132579:-1
position: 1132579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1131882-1131990:-1:exon

position:1131882:-1
position: 1131882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131990:-1
position: 1131990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1131589-1131687:-1:exon

position:1131589:-1
position: 1131589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131687:-1
position: 1131687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1131135-1131306:-1:exon

position:1131135:-1
position: 1131135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131306:-1
position: 1131306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1130213-1130356:-1:exon

position:1130356:-1
position: 1130356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TULP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TULP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubby-related protein 1
translation: MSVFQVKKEKKNKKKASTSSDEEDDSDSSTKPIRSEKKKNPASLFQTGGDPPKEKKSKKKAVPPKGAESEEETPETLQKNSNKKGKAKKSKKKEERPPSPVIEVDNLEEFVLQPAPQGVTVKCRVTRDKRGMDRGLYPTYYLHLDNDKKVFLLAGRKRKKSKTSNYLISIDPTDLSRGGENFIGKLRSNLMGTRFTVFDNGANPDRANADWSNVRQELSAVVYETNVLGFKGPRKMTVIIPGMNADCERVPIRPRNDNDGLLMRWQNRNMDNVIELHNKAPVWNDETQSYVLNFHGRVTHASVKNFQIVHSSDPDYIVMQFGRVADDAFTMDYSYPLCAVQAFAIALSSFDGKLACE
SIO_010081: TULP1
subclass of: SO_0000673
so part of: TULP1
location: complement(join(1130223..1130356,1131135..1131306,1131589..1131687,1131882..1131990,1132467..1132579,1132883..1133053,1133275..1133369,1133530..1133664,1133771..1133816))
location: region:1130223-1133816:-1
so has part: feature:1133771-1133816:-1:exon
so has part: feature:1133530-1133664:-1:exon
so has part: feature:1133275-1133369:-1:exon
so has part: feature:1132883-1133053:-1:exon
so has part: feature:1132467-1132579:-1:exon
so has part: feature:1131882-1131990:-1:exon
so has part: feature:1131589-1131687:-1:exon
so has part: feature:1131135-1131306:-1:exon
so has part: feature:1130223-1130356:-1:exon

XP_021391680.2
type: Protein
SIO_000068: ncbiprotein

position:1130223:-1
position: 1130223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133816:-1
position: 1133816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133771-1133816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133530-1133664:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133275-1133369:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132883-1133053:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1132467-1132579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131882-1131990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1131589-1131687:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1131135-1131306:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130223-1130356:-1:exon

FKBP5
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FKBP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1139865..1159275)
location: region:1139865-1159275:-1
so has part: feature:1139865-1159275:-1:exon
subclass of: SO_0000010

110473453
type: Gene
SIO_000068: ncbigene

position:1139865:-1
position: 1139865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159275:-1
position: 1159275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1139865-1159275:-1:exon

FKBP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FKBP5
product: FKBP prolyl isomerase 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021535999.2
SIO_010081: FKBP5
subclass of: SO_0000673
so part of: FKBP5
location: complement(join(1139865..1140991,1142144..1142383,1143159..1143344,1143793..1143876,1144643..1144733,1145202..1145358,1148451..1148565,1149443..1149585,1149794..1149938,1150793..1150910,1153271..1153347,1159230..1159275))
location: region:1139865-1159275:-1
so has part: feature:1159230-1159275:-1:exon
so has part: feature:1153271-1153347:-1:exon
so has part: feature:1150793-1150910:-1:exon
so has part: feature:1149794-1149938:-1:exon
so has part: feature:1149443-1149585:-1:exon
so has part: feature:1148451-1148565:-1:exon
so has part: feature:1145202-1145358:-1:exon
so has part: feature:1144643-1144733:-1:exon
so has part: feature:1143793-1143876:-1:exon
so has part: feature:1143159-1143344:-1:exon
so has part: feature:1142144-1142383:-1:exon
so has part: feature:1139865-1140991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1159230-1159275:-1:exon

position:1159230:-1
position: 1159230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1153271-1153347:-1:exon

position:1153271:-1
position: 1153271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153347:-1
position: 1153347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1150793-1150910:-1:exon

position:1150793:-1
position: 1150793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150910:-1
position: 1150910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1149794-1149938:-1:exon

position:1149794:-1
position: 1149794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149938:-1
position: 1149938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1149443-1149585:-1:exon

position:1149443:-1
position: 1149443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149585:-1
position: 1149585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1148451-1148565:-1:exon

position:1148451:-1
position: 1148451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148565:-1
position: 1148565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1145202-1145358:-1:exon

position:1145202:-1
position: 1145202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145358:-1
position: 1145358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1144643-1144733:-1:exon

position:1144643:-1
position: 1144643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144733:-1
position: 1144733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1143793-1143876:-1:exon

position:1143793:-1
position: 1143793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143876:-1
position: 1143876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1143159-1143344:-1:exon

position:1143159:-1
position: 1143159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143344:-1
position: 1143344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1142144-1142383:-1:exon

position:1142144:-1
position: 1142144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142383:-1
position: 1142383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1139865-1140991:-1:exon

position:1140991:-1
position: 1140991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FKBP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FKBP5
product: FKBP prolyl isomerase 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021536000.2
SIO_010081: FKBP5
subclass of: SO_0000673
so part of: FKBP5
location: complement(join(1139865..1140991,1142144..1142383,1143159..1143344,1143793..1143876,1144643..1144733,1145202..1145358,1148451..1148565,1149443..1149585,1149794..1149938,1150793..1150910,1153271..1153347,1159172..1159179))
location: region:1139865-1159179:-1
so has part: feature:1159172-1159179:-1:exon
so has part: feature:1153271-1153347:-1:exon
so has part: feature:1150793-1150910:-1:exon
so has part: feature:1149794-1149938:-1:exon
so has part: feature:1149443-1149585:-1:exon
so has part: feature:1148451-1148565:-1:exon
so has part: feature:1145202-1145358:-1:exon
so has part: feature:1144643-1144733:-1:exon
so has part: feature:1143793-1143876:-1:exon
so has part: feature:1143159-1143344:-1:exon
so has part: feature:1142144-1142383:-1:exon
so has part: feature:1139865-1140991:-1:exon

position:1159179:-1
position: 1159179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159172-1159179:-1:exon

position:1159172:-1
position: 1159172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1153271-1153347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1150793-1150910:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1149794-1149938:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1149443-1149585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1148451-1148565:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1145202-1145358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1144643-1144733:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1143793-1143876:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1143159-1143344:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1142144-1142383:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1139865-1140991:-1:exon

FKBP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FKBP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP5
translation: MVARSKDTMTTDEATKSEGEVQAAALAERGEDITPSKDRGVLKIIKRAGSEDESPMIGDKVYVHYKGKLANGKKFDSSRDRNEPFIFSLGKGQVIKAWDIGVATMKKGEICYLLCKPEYAYGSAGSAPKIPSNATLFFEVELLDFKGEDLFEDGGIIRRIKSKGEGYSNPNEGATVEIHLEGFCGGRRFDCKDVKFVVGEGEDHDIPIGIDKALEKMQRGEHCILYLSPRYGFGEAGKPKFGIQGNAELVYEVTLKSFEKAKESWEMDTKEKLEQAAVVKEKGTMYFKEGKYLQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYAKAVECCDKALGLDQDNEKGLYRRGEARLLMNEFELAKCDFQKVLEVNPQNKAAKSQISVCQKKTKEHNERDRRIYANMFTKFAERDAKEAASKTGVEKPAEKAARGKGPQAPGAEGEEAEGHV
SIO_010081: FKBP5
subclass of: SO_0000673
so part of: FKBP5
location: complement(join(1140884..1140991,1142144..1142383,1143159..1143344,1143793..1143876,1144643..1144733,1145202..1145358,1148451..1148565,1149443..1149585,1149794..1149938,1150793..1150910,1153271..1153281))
location: region:1140884-1153281:-1
so has part: feature:1153271-1153281:-1:exon
so has part: feature:1150793-1150910:-1:exon
so has part: feature:1149794-1149938:-1:exon
so has part: feature:1149443-1149585:-1:exon
so has part: feature:1148451-1148565:-1:exon
so has part: feature:1145202-1145358:-1:exon
so has part: feature:1144643-1144733:-1:exon
so has part: feature:1143793-1143876:-1:exon
so has part: feature:1143159-1143344:-1:exon
so has part: feature:1142144-1142383:-1:exon
so has part: feature:1140884-1140991:-1:exon

XP_021391674.1
type: Protein
SIO_000068: ncbiprotein

position:1140884:-1
position: 1140884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153281:-1
position: 1153281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153271-1153281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1150793-1150910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1149794-1149938:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1149443-1149585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1148451-1148565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1145202-1145358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1144643-1144733:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1143793-1143876:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1143159-1143344:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1142144-1142383:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1140884-1140991:-1:exon

FKBP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FKBP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP5
translation: MVARSKDTMTTDEATKSEGEVQAAALAERGEDITPSKDRGVLKIIKRAGSEDESPMIGDKVYVHYKGKLANGKKFDSSRDRNEPFIFSLGKGQVIKAWDIGVATMKKGEICYLLCKPEYAYGSAGSAPKIPSNATLFFEVELLDFKGEDLFEDGGIIRRIKSKGEGYSNPNEGATVEIHLEGFCGGRRFDCKDVKFVVGEGEDHDIPIGIDKALEKMQRGEHCILYLSPRYGFGEAGKPKFGIQGNAELVYEVTLKSFEKAKESWEMDTKEKLEQAAVVKEKGTMYFKEGKYLQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYAKAVECCDKALGLDQDNEKGLYRRGEARLLMNEFELAKCDFQKVLEVNPQNKAAKSQISVCQKKTKEHNERDRRIYANMFTKFAERDAKEAASKTGVEKPAEKAARGKGPQAPGAEGEEAEGHV
SIO_010081: FKBP5
subclass of: SO_0000673
so part of: FKBP5
location: complement(join(1140884..1140991,1142144..1142383,1143159..1143344,1143793..1143876,1144643..1144733,1145202..1145358,1148451..1148565,1149443..1149585,1149794..1149938,1150793..1150910,1153271..1153281))
location: region:1140884-1153281:-1
so has part: feature:1153271-1153281:-1:exon
so has part: feature:1150793-1150910:-1:exon
so has part: feature:1149794-1149938:-1:exon
so has part: feature:1149443-1149585:-1:exon
so has part: feature:1148451-1148565:-1:exon
so has part: feature:1145202-1145358:-1:exon
so has part: feature:1144643-1144733:-1:exon
so has part: feature:1143793-1143876:-1:exon
so has part: feature:1143159-1143344:-1:exon
so has part: feature:1142144-1142383:-1:exon
so has part: feature:1140884-1140991:-1:exon

XP_021391675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1153271-1153281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1150793-1150910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1149794-1149938:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1149443-1149585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1148451-1148565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1145202-1145358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1144643-1144733:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1143793-1143876:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1143159-1143344:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1142144-1142383:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1140884-1140991:-1:exon

CLPS
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CLPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1168132..1169145)
location: region:1168132-1169145:-1
so has part: feature:1168132-1169145:-1:exon
subclass of: SO_0000010

110473438
type: Gene
SIO_000068: ncbigene

position:1168132:-1
position: 1168132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169145:-1
position: 1169145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1168132-1169145:-1:exon

CLPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CLPS
product: colipase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021535976.2
SIO_010081: CLPS
subclass of: SO_0000673
so part of: CLPS
location: complement(join(1168132..1168365,1168445..1168567,1169038..1169145))
location: region:1168132-1169145:-1
so has part: feature:1169038-1169145:-1:exon
so has part: feature:1168445-1168567:-1:exon
so has part: feature:1168132-1168365:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1169038-1169145:-1:exon

position:1169038:-1
position: 1169038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1168445-1168567:-1:exon

position:1168445:-1
position: 1168445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168567:-1
position: 1168567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1168132-1168365:-1:exon

position:1168365:-1
position: 1168365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CLPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: colipase
translation: MANVLPACLLLALLVLTPALLTQQEQEQGQELTFRLDIGELCLQSVQCKSGCCHRENGLSLARCAPKAAESQECSPKSIYGVYYKCPCERGLSCDANRTIVGSITNSNFGVCKDPRDF
SIO_010081: CLPS
subclass of: SO_0000673
so part of: CLPS
location: complement(join(1168240..1168365,1168445..1168567,1169038..1169145))
location: region:1168240-1169145:-1
so has part: feature:1169038-1169145:-1:exon
so has part: feature:1168445-1168567:-1:exon
so has part: feature:1168240-1168365:-1:exon

XP_021391651.2
type: Protein
SIO_000068: ncbiprotein

position:1168240:-1
position: 1168240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1169038-1169145:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1168445-1168567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1168240-1168365:-1:exon

LHFPL5
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LHFPL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1170820..1175519
location: region:1170820-1175519:1
so has part: feature:1170820-1175519:1:exon
subclass of: SO_0000010

110473466
type: Gene
SIO_000068: ncbigene

position:1170820:1
position: 1170820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175519:1
position: 1175519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170820-1175519:1:exon

LHFPL5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LHFPL5
product: LHFPL tetraspan subfamily member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 18 ESTs, 8 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021536020.1
SIO_010081: LHFPL5
subclass of: SO_0000673
so part of: LHFPL5
location: join(1170820..1171391,1173952..1174188,1174926..1174958,1175218..1175519)
location: region:1170820-1175519:1
so has part: feature:1170820-1171391:1:exon
so has part: feature:1173952-1174188:1:exon
so has part: feature:1174926-1174958:1:exon
so has part: feature:1175218-1175519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1170820-1171391:1:exon

position:1171391:1
position: 1171391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1173952-1174188:1:exon

position:1173952:1
position: 1173952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174188:1
position: 1174188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1174926-1174958:1:exon

position:1174926:1
position: 1174926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174958:1
position: 1174958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1175218-1175519:1:exon

position:1175218:1
position: 1175218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LHFPL5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LHFPL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LHFPL tetraspan subfamily member 5 protein
translation: MSKLLPAQEAARIYHTNYVRNARAMGVLWALFTLCFSILMVVTFIQPYWIGDSIDTPQAGYFGLFSYCIGNALTGELICKGSPLDFGTIPSSAFKTAMFFVGISTFLIIGTILCFSLFFFCNAATVYKVCAWMQLAAATGLMIGCLIYPDGWDSSEVRRMCGDKTDKYTLGACTVRWAYILCIIGILDALILSFLAFVLGNRQDNLLPSDFKVESKEEGND
SIO_010081: LHFPL5
subclass of: SO_0000673
so part of: LHFPL5
location: join(1170980..1171391,1173952..1174188,1174926..1174942)
location: region:1170980-1174942:1
so has part: feature:1170980-1171391:1:exon
so has part: feature:1173952-1174188:1:exon
so has part: feature:1174926-1174942:1:exon

XP_021391695.1
type: Protein
SIO_000068: ncbiprotein

position:1170980:1
position: 1170980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174942:1
position: 1174942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170980-1171391:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1173952-1174188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1174926-1174942:1:exon

SRPK1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SRPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1176332..1199643)
location: region:1176332-1199643:-1
so has part: feature:1176332-1199643:-1:exon
subclass of: SO_0000010

110473463
type: Gene
SIO_000068: ncbigene

position:1176332:-1
position: 1176332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199643:-1
position: 1199643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176332-1199643:-1:exon

SRPK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SRPK1
product: SRSF protein kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021536013.1
SIO_010081: SRPK1
subclass of: SO_0000673
so part of: SRPK1
location: complement(join(1176332..1178861,1179707..1179799,1180253..1180322,1181605..1181712,1182624..1182724,1184178..1184606,1184872..1185088,1185583..1185608,1186602..1186767,1187419..1187525,1188924..1189011,1189173..1189260,1189654..1189762,1190644..1190762,1199430..1199490,1199576..1199643))
location: region:1176332-1199643:-1
so has part: feature:1199576-1199643:-1:exon
so has part: feature:1199430-1199490:-1:exon
so has part: feature:1190644-1190762:-1:exon
so has part: feature:1189654-1189762:-1:exon
so has part: feature:1189173-1189260:-1:exon
so has part: feature:1188924-1189011:-1:exon
so has part: feature:1187419-1187525:-1:exon
so has part: feature:1186602-1186767:-1:exon
so has part: feature:1185583-1185608:-1:exon
so has part: feature:1184872-1185088:-1:exon
so has part: feature:1184178-1184606:-1:exon
so has part: feature:1182624-1182724:-1:exon
so has part: feature:1181605-1181712:-1:exon
so has part: feature:1180253-1180322:-1:exon
so has part: feature:1179707-1179799:-1:exon
so has part: feature:1176332-1178861:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1199576-1199643:-1:exon

position:1199576:-1
position: 1199576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1199430-1199490:-1:exon

position:1199430:-1
position: 1199430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199490:-1
position: 1199490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1190644-1190762:-1:exon

position:1190644:-1
position: 1190644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190762:-1
position: 1190762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1189654-1189762:-1:exon

position:1189654:-1
position: 1189654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189762:-1
position: 1189762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1189173-1189260:-1:exon

position:1189173:-1
position: 1189173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189260:-1
position: 1189260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1188924-1189011:-1:exon

position:1188924:-1
position: 1188924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189011:-1
position: 1189011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1187419-1187525:-1:exon

position:1187419:-1
position: 1187419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187525:-1
position: 1187525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1186602-1186767:-1:exon

position:1186602:-1
position: 1186602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1186767:-1
position: 1186767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1185583-1185608:-1:exon

position:1185583:-1
position: 1185583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185608:-1
position: 1185608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1184872-1185088:-1:exon

position:1184872:-1
position: 1184872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185088:-1
position: 1185088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1184178-1184606:-1:exon

position:1184178:-1
position: 1184178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184606:-1
position: 1184606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1182624-1182724:-1:exon

position:1182624:-1
position: 1182624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182724:-1
position: 1182724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1181605-1181712:-1:exon

position:1181605:-1
position: 1181605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181712:-1
position: 1181712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1180253-1180322:-1:exon

position:1180253:-1
position: 1180253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180322:-1
position: 1180322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1179707-1179799:-1:exon

position:1179707:-1
position: 1179707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179799:-1
position: 1179799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1176332-1178861:-1:exon

position:1178861:-1
position: 1178861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRPK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SRPK1
product: SRSF protein kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021536014.2
SIO_010081: SRPK1
subclass of: SO_0000673
so part of: SRPK1
location: complement(join(1176332..1178861,1179707..1179799,1180253..1180322,1181605..1181712,1182624..1182724,1184178..1184606,1184872..1185088,1185583..1185608,1186602..1186767,1187419..1187525,1188924..1189011,1189173..1189260,1189654..1189762,1190644..1190762,1194246..1194516,1199430..1199490))
location: region:1176332-1199490:-1
so has part: feature:1199430-1199490:-1:exon
so has part: feature:1194246-1194516:-1:exon
so has part: feature:1190644-1190762:-1:exon
so has part: feature:1189654-1189762:-1:exon
so has part: feature:1189173-1189260:-1:exon
so has part: feature:1188924-1189011:-1:exon
so has part: feature:1187419-1187525:-1:exon
so has part: feature:1186602-1186767:-1:exon
so has part: feature:1185583-1185608:-1:exon
so has part: feature:1184872-1185088:-1:exon
so has part: feature:1184178-1184606:-1:exon
so has part: feature:1182624-1182724:-1:exon
so has part: feature:1181605-1181712:-1:exon
so has part: feature:1180253-1180322:-1:exon
so has part: feature:1179707-1179799:-1:exon
so has part: feature:1176332-1178861:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1199430-1199490:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1194246-1194516:-1:exon

position:1194246:-1
position: 1194246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194516:-1
position: 1194516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1190644-1190762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189654-1189762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1189173-1189260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1188924-1189011:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187419-1187525:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1186602-1186767:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1185583-1185608:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184872-1185088:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1184178-1184606:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1182624-1182724:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1181605-1181712:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1180253-1180322:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1179707-1179799:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1176332-1178861:-1:exon

SRPK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SRPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRSF protein kinase 1 isoform X1
translation: MERKVLALQARKKRTKAKKDKAQRKPDTQHRGLAANSENELPEPEEEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLAWDIQGRRFVAMKVVKSAEHYTETALDEIKLLKSVRNSDPDDPSKERVVQLLDDFKISGVNGSHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLCVNDQYIRRLAAEATEWQRSGAPPPSGSAVSTAPQPKPADKMSKNKKKKLKKKQKRQAELLEKRMQEIEEMEKEANPEQTQPEEEEEEAQTPLEMLIKVSPSEESISKKPAQALGQEGSNLMESSVGKHAREINCNGVIPITDLTDSGNEGSVQLEDDLHNANDCENHPHTQKTENLHSCNYSQHNSDSEISPQEAMLDLFVPLVPEGSMVCQPIPNQKQAFREQEINNFQESIRTEIPSEDENENNSPTDNKGKSAAGNFLLNPLEPKNADKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIALIIELLGKIPRKLILAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQDEAAAFTDFLLPMLELIPEKRATAAECLRHPWLNS
SIO_010081: SRPK1
subclass of: SO_0000673
so part of: SRPK1
location: complement(join(1178677..1178861,1179707..1179799,1180253..1180322,1181605..1181712,1182624..1182724,1184178..1184606,1184872..1185088,1185583..1185608,1186602..1186767,1187419..1187525,1188924..1189011,1189173..1189260,1189654..1189762,1190644..1190762,1199430..1199490,1199576..1199588))
location: region:1178677-1199588:-1
so has part: feature:1199576-1199588:-1:exon
so has part: feature:1199430-1199490:-1:exon
so has part: feature:1190644-1190762:-1:exon
so has part: feature:1189654-1189762:-1:exon
so has part: feature:1189173-1189260:-1:exon
so has part: feature:1188924-1189011:-1:exon
so has part: feature:1187419-1187525:-1:exon
so has part: feature:1186602-1186767:-1:exon
so has part: feature:1185583-1185608:-1:exon
so has part: feature:1184872-1185088:-1:exon
so has part: feature:1184178-1184606:-1:exon
so has part: feature:1182624-1182724:-1:exon
so has part: feature:1181605-1181712:-1:exon
so has part: feature:1180253-1180322:-1:exon
so has part: feature:1179707-1179799:-1:exon
so has part: feature:1178677-1178861:-1:exon

XP_021391688.1
type: Protein
SIO_000068: ncbiprotein

position:1178677:-1
position: 1178677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199588:-1
position: 1199588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199576-1199588:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1199430-1199490:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1190644-1190762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189654-1189762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1189173-1189260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1188924-1189011:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187419-1187525:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1186602-1186767:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1185583-1185608:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184872-1185088:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1184178-1184606:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1182624-1182724:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1181605-1181712:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1180253-1180322:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1179707-1179799:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1178677-1178861:-1:exon

SRPK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SRPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRSF protein kinase 1 isoform X2
translation: MAFSKTVGLSSGVSLSMGGRASCRPDTQHRGLAANSENELPEPEEEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLAWDIQGRRFVAMKVVKSAEHYTETALDEIKLLKSVRNSDPDDPSKERVVQLLDDFKISGVNGSHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLCVNDQYIRRLAAEATEWQRSGAPPPSGSAVSTAPQPKPADKMSKNKKKKLKKKQKRQAELLEKRMQEIEEMEKEANPEQTQPEEEEEEAQTPLEMLIKVSPSEESISKKPAQALGQEGSNLMESSVGKHAREINCNGVIPITDLTDSGNEGSVQLEDDLHNANDCENHPHTQKTENLHSCNYSQHNSDSEISPQEAMLDLFVPLVPEGSMVCQPIPNQKQAFREQEINNFQESIRTEIPSEDENENNSPTDNKGKSAAGNFLLNPLEPKNADKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIALIIELLGKIPRKLILAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQDEAAAFTDFLLPMLELIPEKRATAAECLRHPWLNS
SIO_010081: SRPK1
subclass of: SO_0000673
so part of: SRPK1
location: complement(join(1178677..1178861,1179707..1179799,1180253..1180322,1181605..1181712,1182624..1182724,1184178..1184606,1184872..1185088,1185583..1185608,1186602..1186767,1187419..1187525,1188924..1189011,1189173..1189260,1189654..1189762,1190644..1190762,1194246..1194316))
location: region:1178677-1194316:-1
so has part: feature:1194246-1194316:-1:exon
so has part: feature:1190644-1190762:-1:exon
so has part: feature:1189654-1189762:-1:exon
so has part: feature:1189173-1189260:-1:exon
so has part: feature:1188924-1189011:-1:exon
so has part: feature:1187419-1187525:-1:exon
so has part: feature:1186602-1186767:-1:exon
so has part: feature:1185583-1185608:-1:exon
so has part: feature:1184872-1185088:-1:exon
so has part: feature:1184178-1184606:-1:exon
so has part: feature:1182624-1182724:-1:exon
so has part: feature:1181605-1181712:-1:exon
so has part: feature:1180253-1180322:-1:exon
so has part: feature:1179707-1179799:-1:exon
so has part: feature:1178677-1178861:-1:exon

XP_021391689.1
type: Protein
SIO_000068: ncbiprotein

position:1194316:-1
position: 1194316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194246-1194316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1190644-1190762:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1189654-1189762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189173-1189260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188924-1189011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1187419-1187525:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1186602-1186767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1185583-1185608:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1184872-1185088:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184178-1184606:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1182624-1182724:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1181605-1181712:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1180253-1180322:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1179707-1179799:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1178677-1178861:-1:exon

LOC110473468
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110473468
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1199830..1201583
location: region:1199830-1201583:1
so has part: feature:1199830-1201583:1:exon
subclass of: SO_0000011

110473468
type: Gene
SIO_000068: ncbigene

position:1199830:1
position: 1199830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201583:1
position: 1201583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199830-1201583:1:exon

LOC110473468
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110473468
product: uncharacterized LOC110473468
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002465880.2
SIO_010081: LOC110473468
subclass of: SO_0000673
so part of: LOC110473468
location: join(1199830..1199945,1200457..1200586,1201191..1201583)
location: region:1199830-1201583:1
so has part: feature:1199830-1199945:1:exon
so has part: feature:1200457-1200586:1:exon
so has part: feature:1201191-1201583:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1199830-1199945:1:exon

position:1199945:1
position: 1199945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1200457-1200586:1:exon

position:1200457:1
position: 1200457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200586:1
position: 1200586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1201191-1201583:1:exon

position:1201191:1
position: 1201191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAPK14
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MAPK14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1205807..1228050
location: region:1205807-1228050:1
so has part: feature:1205807-1228050:1:exon
subclass of: SO_0000010

110473465
type: Gene
SIO_000068: ncbigene

position:1205807:1
position: 1205807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228050:1
position: 1228050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205807-1228050:1:exon

MAPK14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MAPK14
product: mitogen-activated protein kinase 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021536018.2
SIO_010081: MAPK14
subclass of: SO_0000673
so part of: MAPK14
location: join(1205807..1206245,1212941..1213070,1215141..1215199,1215565..1215676,1216190..1216219,1216638..1216685,1217120..1217234,1218183..1218254,1225686..1225765,1226292..1226370,1226641..1226814,1227586..1228050)
location: region:1205807-1228050:1
so has part: feature:1205807-1206245:1:exon
so has part: feature:1212941-1213070:1:exon
so has part: feature:1215141-1215199:1:exon
so has part: feature:1215565-1215676:1:exon
so has part: feature:1216190-1216219:1:exon
so has part: feature:1216638-1216685:1:exon
so has part: feature:1217120-1217234:1:exon
so has part: feature:1218183-1218254:1:exon
so has part: feature:1225686-1225765:1:exon
so has part: feature:1226292-1226370:1:exon
so has part: feature:1226641-1226814:1:exon
so has part: feature:1227586-1228050:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1205807-1206245:1:exon

position:1206245:1
position: 1206245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1212941-1213070:1:exon

position:1212941:1
position: 1212941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213070:1
position: 1213070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1215141-1215199:1:exon

position:1215141:1
position: 1215141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215199:1
position: 1215199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1215565-1215676:1:exon

position:1215565:1
position: 1215565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215676:1
position: 1215676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1216190-1216219:1:exon

position:1216190:1
position: 1216190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216219:1
position: 1216219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1216638-1216685:1:exon

position:1216638:1
position: 1216638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216685:1
position: 1216685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1217120-1217234:1:exon

position:1217120:1
position: 1217120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217234:1
position: 1217234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1218183-1218254:1:exon

position:1218183:1
position: 1218183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218254:1
position: 1218254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1225686-1225765:1:exon

position:1225686:1
position: 1225686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1225765:1
position: 1225765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1226292-1226370:1:exon

position:1226292:1
position: 1226292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226370:1
position: 1226370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1226641-1226814:1:exon

position:1226641:1
position: 1226641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226814:1
position: 1226814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1227586-1228050:1:exon

position:1227586:1
position: 1227586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAPK14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MAPK14
product: mitogen-activated protein kinase 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021536019.1
SIO_010081: MAPK14
subclass of: SO_0000673
so part of: MAPK14
location: join(1206130..1206245,1212941..1213070,1215141..1215199,1215565..1215676,1216190..1216219,1216638..1216685,1217120..1217234,1218183..1218254,1223614..1223693,1226292..1226370,1226641..1226814,1227586..1227653)
location: region:1206130-1227653:1
so has part: feature:1206130-1206245:1:exon
so has part: feature:1212941-1213070:1:exon
so has part: feature:1215141-1215199:1:exon
so has part: feature:1215565-1215676:1:exon
so has part: feature:1216190-1216219:1:exon
so has part: feature:1216638-1216685:1:exon
so has part: feature:1217120-1217234:1:exon
so has part: feature:1218183-1218254:1:exon
so has part: feature:1223614-1223693:1:exon
so has part: feature:1226292-1226370:1:exon
so has part: feature:1226641-1226814:1:exon
so has part: feature:1227586-1227653:1:exon

position:1206130:1
position: 1206130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227653:1
position: 1227653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206130-1206245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1212941-1213070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1215141-1215199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215565-1215676:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1216190-1216219:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1216638-1216685:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1217120-1217234:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1218183-1218254:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1223614-1223693:1:exon

position:1223614:1
position: 1223614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223693:1
position: 1223693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1226292-1226370:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1226641-1226814:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1227586-1227653:1:exon

MAPK14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MAPK14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 14 isoform X2
translation: MSQERPKFYRQELNKTVWEVPERYQNLSPVGSGAYGSVCSAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAKSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGPELLKKISSESARNYIQSLSYMPKMNFENVFIGANPLAVDLLEKMLVLDTDKRITAAEALAHAYFAQYHDPDDEPVADPYDQSFESRELEIEEWKSLTYDEVISFVPPPLDQEEMES
SIO_010081: MAPK14
subclass of: SO_0000673
so part of: MAPK14
location: join(1206130..1206245,1212941..1213070,1215141..1215199,1215565..1215676,1216190..1216219,1216638..1216685,1217120..1217234,1218183..1218254,1223614..1223693,1226292..1226370,1226641..1226814,1227586..1227653)
location: region:1206130-1227653:1
so has part: feature:1206130-1206245:1:exon
so has part: feature:1212941-1213070:1:exon
so has part: feature:1215141-1215199:1:exon
so has part: feature:1215565-1215676:1:exon
so has part: feature:1216190-1216219:1:exon
so has part: feature:1216638-1216685:1:exon
so has part: feature:1217120-1217234:1:exon
so has part: feature:1218183-1218254:1:exon
so has part: feature:1223614-1223693:1:exon
so has part: feature:1226292-1226370:1:exon
so has part: feature:1226641-1226814:1:exon
so has part: feature:1227586-1227653:1:exon

XP_021391694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1206130-1206245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1212941-1213070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1215141-1215199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215565-1215676:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1216190-1216219:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1216638-1216685:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1217120-1217234:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1218183-1218254:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1223614-1223693:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1226292-1226370:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1226641-1226814:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1227586-1227653:1:exon

MAPK14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MAPK14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 14 isoform X1
translation: MSQERPKFYRQELNKTVWEVPERYQNLSPVGSGAYGSVCSAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAKSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPAYLINRMPSHEARNYIQSLSYMPKMNFENVFIGANPLAVDLLEKMLVLDTDKRITAAEALAHAYFAQYHDPDDEPVADPYDQSFESRELEIEEWKSLTYDEVISFVPPPLDQEEMES
SIO_010081: MAPK14
subclass of: SO_0000673
so part of: MAPK14
location: join(1206130..1206245,1212941..1213070,1215141..1215199,1215565..1215676,1216190..1216219,1216638..1216685,1217120..1217234,1218183..1218254,1225686..1225765,1226292..1226370,1226641..1226814,1227586..1227653)
location: region:1206130-1227653:1
so has part: feature:1206130-1206245:1:exon
so has part: feature:1212941-1213070:1:exon
so has part: feature:1215141-1215199:1:exon
so has part: feature:1215565-1215676:1:exon
so has part: feature:1216190-1216219:1:exon
so has part: feature:1216638-1216685:1:exon
so has part: feature:1217120-1217234:1:exon
so has part: feature:1218183-1218254:1:exon
so has part: feature:1225686-1225765:1:exon
so has part: feature:1226292-1226370:1:exon
so has part: feature:1226641-1226814:1:exon
so has part: feature:1227586-1227653:1:exon

XP_021391693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1206130-1206245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1212941-1213070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1215141-1215199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215565-1215676:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1216190-1216219:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1216638-1216685:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1217120-1217234:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1218183-1218254:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1225686-1225765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1226292-1226370:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1226641-1226814:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1227586-1227653:1:exon

LOC116184504
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184504
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1206705..1213425)
location: region:1206705-1213425:-1
so has part: feature:1206705-1213425:-1:exon
subclass of: SO_0000011

116184504
type: Gene
SIO_000068: ncbigene

position:1206705:-1
position: 1206705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213425:-1
position: 1213425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206705-1213425:-1:exon

LOC116184504
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184504
product: uncharacterized LOC116184504
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004149262.1
SIO_010081: LOC116184504
subclass of: SO_0000673
so part of: LOC116184504
location: complement(join(1206705..1206734,1208246..1208342,1213315..1213425))
location: region:1206705-1213425:-1
so has part: feature:1213315-1213425:-1:exon
so has part: feature:1208246-1208342:-1:exon
so has part: feature:1206705-1206734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1213315-1213425:-1:exon

position:1213315:-1
position: 1213315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1208246-1208342:-1:exon

position:1208246:-1
position: 1208246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208342:-1
position: 1208342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1206705-1206734:-1:exon

position:1206734:-1
position: 1206734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAPK13
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MAPK13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1231363..1241966
location: region:1231363-1241966:1
so has part: feature:1231363-1241966:1:exon
subclass of: SO_0000010

110473464
type: Gene
SIO_000068: ncbigene

position:1231363:1
position: 1231363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241966:1
position: 1241966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231363-1241966:1:exon

MAPK13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MAPK13
product: mitogen-activated protein kinase 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021536016.2
SIO_010081: MAPK13
subclass of: SO_0000673
so part of: MAPK13
location: join(1231363..1231678,1234667..1234796,1235148..1235206,1236244..1236352,1237241..1237270,1237712..1237759,1238671..1238785,1239140..1239211,1239695..1239774,1240213..1240291,1241194..1241370,1241662..1241966)
location: region:1231363-1241966:1
so has part: feature:1231363-1231678:1:exon
so has part: feature:1234667-1234796:1:exon
so has part: feature:1235148-1235206:1:exon
so has part: feature:1236244-1236352:1:exon
so has part: feature:1237241-1237270:1:exon
so has part: feature:1237712-1237759:1:exon
so has part: feature:1238671-1238785:1:exon
so has part: feature:1239140-1239211:1:exon
so has part: feature:1239695-1239774:1:exon
so has part: feature:1240213-1240291:1:exon
so has part: feature:1241194-1241370:1:exon
so has part: feature:1241662-1241966:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1231363-1231678:1:exon

position:1231678:1
position: 1231678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1234667-1234796:1:exon

position:1234667:1
position: 1234667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234796:1
position: 1234796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1235148-1235206:1:exon

position:1235148:1
position: 1235148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235206:1
position: 1235206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1236244-1236352:1:exon

position:1236244:1
position: 1236244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236352:1
position: 1236352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1237241-1237270:1:exon

position:1237241:1
position: 1237241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237270:1
position: 1237270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1237712-1237759:1:exon

position:1237712:1
position: 1237712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237759:1
position: 1237759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1238671-1238785:1:exon

position:1238671:1
position: 1238671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238785:1
position: 1238785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1239140-1239211:1:exon

position:1239140:1
position: 1239140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239211:1
position: 1239211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1239695-1239774:1:exon

position:1239695:1
position: 1239695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239774:1
position: 1239774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1240213-1240291:1:exon

position:1240213:1
position: 1240213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240291:1
position: 1240291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1241194-1241370:1:exon

position:1241194:1
position: 1241194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241370:1
position: 1241370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1241662-1241966:1:exon

position:1241662:1
position: 1241662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAPK13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MAPK13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 13
translation: MNIARRRGFYRQEVNNTLWELPRRYTSLHPLGSGAYGSVCSAIDKKTGEKVAIKKLCRPFQSEIFAKRAYRELMLLKHMQHENVIGLLDVFTSTASYHGFQDFYLVMPYMRTDLQKIMGHEFSDEKIQYLVYQMLKGLKYIHSAGIVHRDLKPSNLAVNEDCQLKILDFGLARQADAEMTGYVVTRWYRAPEVILNWMHYNHTVDIWSIGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGHPGEDFLEKLEDKAAKSYIKSLPKIPKKDLSVLFPKANPQAVDLLDKMLQLDVEKRLTATQALAHPYFDQFRDIEEETEAQHSYDDSLEHEKLSIEEWKKHIYKEILTFSPIARKDSKKRSGMSL
SIO_010081: MAPK13
subclass of: SO_0000673
so part of: MAPK13
location: join(1231560..1231678,1234667..1234796,1235148..1235206,1236244..1236352,1237241..1237270,1237712..1237759,1238671..1238785,1239140..1239211,1239695..1239774,1240213..1240291,1241194..1241370,1241662..1241741)
location: region:1231560-1241741:1
so has part: feature:1231560-1231678:1:exon
so has part: feature:1234667-1234796:1:exon
so has part: feature:1235148-1235206:1:exon
so has part: feature:1236244-1236352:1:exon
so has part: feature:1237241-1237270:1:exon
so has part: feature:1237712-1237759:1:exon
so has part: feature:1238671-1238785:1:exon
so has part: feature:1239140-1239211:1:exon
so has part: feature:1239695-1239774:1:exon
so has part: feature:1240213-1240291:1:exon
so has part: feature:1241194-1241370:1:exon
so has part: feature:1241662-1241741:1:exon

XP_021391691.1
type: Protein
SIO_000068: ncbiprotein

position:1231560:1
position: 1231560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241741:1
position: 1241741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231560-1231678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234667-1234796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1235148-1235206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1236244-1236352:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1237241-1237270:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1237712-1237759:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1238671-1238785:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1239140-1239211:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1239695-1239774:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1240213-1240291:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1241194-1241370:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1241662-1241741:1:exon

LOC110473467
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110473467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1233368..1249510)
location: region:1233368-1249510:-1
so has part: feature:1233368-1249510:-1:exon
subclass of: SO_0000011

110473467
type: Gene
SIO_000068: ncbigene

position:1233368:-1
position: 1233368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249510:-1
position: 1249510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1233368-1249510:-1:exon

LOC110473467
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110473467
product: uncharacterized LOC110473467, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002465879.2
SIO_010081: LOC110473467
subclass of: SO_0000673
so part of: LOC110473467
location: complement(join(1233368..1233575,1245559..1245689,1248192..1248546))
location: region:1233368-1248546:-1
so has part: feature:1248192-1248546:-1:exon
so has part: feature:1245559-1245689:-1:exon
so has part: feature:1233368-1233575:-1:exon

position:1248546:-1
position: 1248546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248192-1248546:-1:exon

position:1248192:-1
position: 1248192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1245559-1245689:-1:exon

position:1245559:-1
position: 1245559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245689:-1
position: 1245689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1233368-1233575:-1:exon

position:1233575:-1
position: 1233575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110473467
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110473467
product: uncharacterized LOC110473467, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002465876.2
SIO_010081: LOC110473467
subclass of: SO_0000673
so part of: LOC110473467
location: complement(join(1237032..1238943,1245559..1245689,1248192..1248546))
location: region:1237032-1248546:-1
so has part: feature:1248192-1248546:-1:exon
so has part: feature:1245559-1245689:-1:exon
so has part: feature:1237032-1238943:-1:exon

position:1237032:-1
position: 1237032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248192-1248546:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1245559-1245689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1237032-1238943:-1:exon

position:1238943:-1
position: 1238943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110473467
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110473467
product: uncharacterized LOC110473467, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002465877.2
SIO_010081: LOC110473467
subclass of: SO_0000673
so part of: LOC110473467
location: complement(join(1243070..1243230,1245559..1245689,1248192..1248546))
location: region:1243070-1248546:-1
so has part: feature:1248192-1248546:-1:exon
so has part: feature:1245559-1245689:-1:exon
so has part: feature:1243070-1243230:-1:exon

position:1243070:-1
position: 1243070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248192-1248546:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1245559-1245689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1243070-1243230:-1:exon

position:1243230:-1
position: 1243230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110473467
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110473467
product: uncharacterized LOC110473467, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002465875.2
SIO_010081: LOC110473467
subclass of: SO_0000673
so part of: LOC110473467
location: complement(join(1244940..1245689,1248192..1248312,1249281..1249510))
location: region:1244940-1249510:-1
so has part: feature:1249281-1249510:-1:exon
so has part: feature:1248192-1248312:-1:exon
so has part: feature:1244940-1245689:-1:exon

position:1244940:-1
position: 1244940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1249281-1249510:-1:exon

position:1249281:-1
position: 1249281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1248192-1248312:-1:exon

position:1248312:-1
position: 1248312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1244940-1245689:-1:exon

LOC116184505
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184505
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1247818..1248186
location: region:1247818-1248186:1
so has part: feature:1247818-1248186:1:exon
subclass of: SO_0000011

116184505
type: Gene
SIO_000068: ncbigene

position:1247818:1
position: 1247818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248186:1
position: 1248186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1247818-1248186:1:exon

LOC116184505
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184505
product: uncharacterized LOC116184505
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004149263.1
SIO_010081: LOC116184505
subclass of: SO_0000673
so part of: LOC116184505
location: join(1247818..1248008,1248116..1248186)
location: region:1247818-1248186:1
so has part: feature:1247818-1248008:1:exon
so has part: feature:1248116-1248186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1247818-1248008:1:exon

position:1248008:1
position: 1248008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1248116-1248186:1:exon

position:1248116:1
position: 1248116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRPF3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: BRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1249123..1266333
location: region:1249123-1266333:1
so has part: feature:1249123-1266333:1:exon
subclass of: SO_0000010

110473462
type: Gene
SIO_000068: ncbigene

position:1249123:1
position: 1249123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266333:1
position: 1266333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1249123-1266333:1:exon

BRPF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: BRPF3
product: bromodomain and PHD finger containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021536011.2
SIO_010081: BRPF3
subclass of: SO_0000673
so part of: BRPF3
location: join(1249123..1249218,1251998..1253400,1254263..1254419,1255797..1255928,1257846..1257974,1258319..1258631,1259698..1259961,1260116..1260593,1261459..1261556,1262100..1262197,1263659..1263813,1264110..1266333)
location: region:1249123-1266333:1
so has part: feature:1249123-1249218:1:exon
so has part: feature:1251998-1253400:1:exon
so has part: feature:1254263-1254419:1:exon
so has part: feature:1255797-1255928:1:exon
so has part: feature:1257846-1257974:1:exon
so has part: feature:1258319-1258631:1:exon
so has part: feature:1259698-1259961:1:exon
so has part: feature:1260116-1260593:1:exon
so has part: feature:1261459-1261556:1:exon
so has part: feature:1262100-1262197:1:exon
so has part: feature:1263659-1263813:1:exon
so has part: feature:1264110-1266333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1249123-1249218:1:exon

position:1249218:1
position: 1249218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1251998-1253400:1:exon

position:1251998:1
position: 1251998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253400:1
position: 1253400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1254263-1254419:1:exon

position:1254263:1
position: 1254263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254419:1
position: 1254419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1255797-1255928:1:exon

position:1255797:1
position: 1255797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1255928:1
position: 1255928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1257846-1257974:1:exon

position:1257846:1
position: 1257846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257974:1
position: 1257974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1258319-1258631:1:exon

position:1258319:1
position: 1258319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258631:1
position: 1258631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1259698-1259961:1:exon

position:1259698:1
position: 1259698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259961:1
position: 1259961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1260116-1260593:1:exon

position:1260116:1
position: 1260116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260593:1
position: 1260593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1261459-1261556:1:exon

position:1261459:1
position: 1261459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261556:1
position: 1261556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1262100-1262197:1:exon

position:1262100:1
position: 1262100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262197:1
position: 1262197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1263659-1263813:1:exon

position:1263659:1
position: 1263659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263813:1
position: 1263813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1264110-1266333:1:exon

position:1264110:1
position: 1264110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRPF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: BRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain and PHD finger-containing protein 3
translation: MRKPRRRCRQHLEGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDIDGRLHRISIYDPLKLITEDELTAQDITECNSNKENSEQPLFTSRSKKTPSKGKKKESCSKHAPGISLHLPQPKFRVVDSFSQPDAPPLPAAYYRYIEKPPEDLDVEVEYDMDEEDLAWLEMVNEKRRADGYGTVSADTFELLVDRLEKESYLESRNNGAQQSLIDEDAFCCVCMDDECHNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRCCLQSPSRPVDCVLCPNKGGAFKQTSDGRWAHVVCAIWIPEVCFANTVFLEPIEGINNIPPARWKLTCCICKQKGMGAAIQCHKVNCYTAFHVTCAQRAGLFMKIEPMRETSINGTTFTVRKTAYCESHSPPGTVRRGCPAAGGDWQEVTVKEEEEEEANSGPPKGSVKKNQVKLKQKIKKEPSDTTKGRSSMPVVAVAQIPSYRLNKICSGLSLQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHLQSQRNAEQKEQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAMELQLTPFNVLLRTTLDLLQEKDAAQIFTEPVNLNEVPDYLEFISNPMDFSTMRRKLESHLYRTLDEFEEDFNLIVANCMRYNAKDTIFHRAAVRLRDLGGAILRHARRQADSIGFDTGVGIHLPESPKPHDFYRFSWEDVDNILVPENRAHLSLEAQLKELLEKLDTVSTMRSSGARTRRIRLLRREINSIRHKLAQQQSKALPNGDTVPREGLETTSREGDEEGEKADGAKLPYPPTLEPTGPAPTLSELDSLQDPPTLKPISESRSLNQLQRRMVSDRELFDKKALQQESQAFQRLLSSNGLNGLALSPADSPASPALSSVGRRTSVLFKKAKNGVKLQRGLECSLENGEEHRQGGQHSPSCPDGERQARKRSALGSGLVLEACSGLMPPKRSRGKPALSRVPLLEGVNGDSDFSGSGRPLLMSFESQAELEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPMDVLKLGEQRQTEAGEKLFLVLFFDNKRTWQWLPRDKVFPLGVDDTVDKLKMMEGRKTSIRKSVQVAYDRAMIHLSRVQGDNPFIPATYL
SIO_010081: BRPF3
subclass of: SO_0000673
so part of: BRPF3
location: join(1252016..1253400,1254263..1254419,1255797..1255928,1257846..1257974,1258319..1258631,1259698..1259961,1260116..1260593,1261459..1261556,1262100..1262197,1263659..1263813,1264110..1264293)
location: region:1252016-1264293:1
so has part: feature:1252016-1253400:1:exon
so has part: feature:1254263-1254419:1:exon
so has part: feature:1255797-1255928:1:exon
so has part: feature:1257846-1257974:1:exon
so has part: feature:1258319-1258631:1:exon
so has part: feature:1259698-1259961:1:exon
so has part: feature:1260116-1260593:1:exon
so has part: feature:1261459-1261556:1:exon
so has part: feature:1262100-1262197:1:exon
so has part: feature:1263659-1263813:1:exon
so has part: feature:1264110-1264293:1:exon

XP_021391686.1
type: Protein
SIO_000068: ncbiprotein

position:1252016:1
position: 1252016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1264293:1
position: 1264293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1252016-1253400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254263-1254419:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1255797-1255928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1257846-1257974:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1258319-1258631:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1259698-1259961:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1260116-1260593:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1261459-1261556:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1262100-1262197:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1263659-1263813:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1264110-1264293:1:exon

TBC1D22B
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TBC1D22B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1267481..1278924)
location: region:1267481-1278924:-1
so has part: feature:1267481-1278924:-1:exon
subclass of: SO_0000010

110473469
type: Gene
SIO_000068: ncbigene

position:1267481:-1
position: 1267481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278924:-1
position: 1278924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267481-1278924:-1:exon

TBC1D22B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TBC1D22B
product: TBC1 domain family member 22B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021536023.1
SIO_010081: TBC1D22B
subclass of: SO_0000673
so part of: TBC1D22B
location: complement(join(1267481..1268531,1269001..1269096,1269315..1269442,1269680..1269755,1270113..1270219,1270680..1270794,1271600..1271665,1271873..1272001,1272396..1272466,1272927..1273106,1273808..1274124,1275052..1275108,1278830..1278924))
location: region:1267481-1278924:-1
so has part: feature:1278830-1278924:-1:exon
so has part: feature:1275052-1275108:-1:exon
so has part: feature:1273808-1274124:-1:exon
so has part: feature:1272927-1273106:-1:exon
so has part: feature:1272396-1272466:-1:exon
so has part: feature:1271873-1272001:-1:exon
so has part: feature:1271600-1271665:-1:exon
so has part: feature:1270680-1270794:-1:exon
so has part: feature:1270113-1270219:-1:exon
so has part: feature:1269680-1269755:-1:exon
so has part: feature:1269315-1269442:-1:exon
so has part: feature:1269001-1269096:-1:exon
so has part: feature:1267481-1268531:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1278830-1278924:-1:exon

position:1278830:-1
position: 1278830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1275052-1275108:-1:exon

position:1275052:-1
position: 1275052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275108:-1
position: 1275108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1273808-1274124:-1:exon

position:1273808:-1
position: 1273808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274124:-1
position: 1274124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1272927-1273106:-1:exon

position:1272927:-1
position: 1272927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273106:-1
position: 1273106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1272396-1272466:-1:exon

position:1272396:-1
position: 1272396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272466:-1
position: 1272466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1271873-1272001:-1:exon

position:1271873:-1
position: 1271873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272001:-1
position: 1272001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1271600-1271665:-1:exon

position:1271600:-1
position: 1271600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271665:-1
position: 1271665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1270680-1270794:-1:exon

position:1270680:-1
position: 1270680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270794:-1
position: 1270794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1270113-1270219:-1:exon

position:1270113:-1
position: 1270113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270219:-1
position: 1270219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1269680-1269755:-1:exon